BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10212
(444 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 259/331 (78%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 85
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 86 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 134
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 194
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 255 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 315 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 344
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 115 FFYSSGEKKDE 125
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 259/331 (78%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 20 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 79
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 80 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 128
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 129 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 188
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 189 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 249 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 308
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 309 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 338
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 109 FFYSSGEKKDE 119
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 259/331 (78%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 71 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 130
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 131 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 179
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 180 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 239
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 240 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 300 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 359
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 360 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 389
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 160 FFYSSGEKKDE 170
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 259/331 (78%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 30 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 89
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 90 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 138
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 139 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 198
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 199 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 259 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 318
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 319 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 348
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 119 FFYSSGEKKDE 129
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 259/331 (78%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 28 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 87
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 88 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 136
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 137 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 196
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 197 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 257 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 316
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 317 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 346
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 117 FFYSSGEKKDE 127
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 420 bits (1079), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/331 (64%), Positives = 258/331 (77%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 85
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 86 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 134
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 194
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 255 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 315 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 344
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 115 FFYSSGEKKDE 125
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 255/322 (79%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 6 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 64
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 65 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 114
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 115 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 174
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 175 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 234
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 235 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 294
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 295 TPTARLTPLEACAHS-FFDELR 315
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 86 FFYSSGEKKDE 96
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/331 (64%), Positives = 258/331 (77%), Gaps = 12/331 (3%)
Query: 103 MKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIR 162
MK+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+
Sbjct: 4 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 63
Query: 163 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEF 222
++ + FK ++ ++ D +++ RL + SS +V+LNLVL++
Sbjct: 64 KVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDY 112
Query: 223 MPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG 282
+PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T
Sbjct: 113 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA 172
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
VLKLCDFGSAK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQ
Sbjct: 173 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 233 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 403 DLISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 293 ALCSRLLEYTPTARLTPLEACAHS-FFDELR 322
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 93 FFYSSGEKKDE 103
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 255/322 (79%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 14 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 72
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 73 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 122
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 123 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 182
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 183 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 242
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 243 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 302
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 303 TPTARLTPLEACAHS-FFDELR 323
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 94 FFYSSGEKKDE 104
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 255/322 (79%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 254/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQ K FKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/334 (63%), Positives = 258/334 (77%), Gaps = 12/334 (3%)
Query: 100 LEDMKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTRE 159
+ K+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ +
Sbjct: 1 MRGSKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV 60
Query: 160 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLV 219
I+++ + FK ++ ++ D +++ RL + SS +V+LNLV
Sbjct: 61 AIKKVLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLV 109
Query: 220 LEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP 279
L+++PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 169
Query: 280 ETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+T VLKLCDFGSAK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELL
Sbjct: 170 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 340 LGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP 399
LGQP+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP
Sbjct: 230 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 289
Query: 400 DAIDLISRLLEYTPSSRISPLQVRSITPFLIELR 433
+AI L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHS-FFDELR 322
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 93 FFYSSGEKKDE 103
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/330 (64%), Positives = 257/330 (77%), Gaps = 12/330 (3%)
Query: 104 KISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIRE 163
K+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I++
Sbjct: 12 KVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 71
Query: 164 MNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFM 223
+ + FK ++ ++ D +++ RL + SS +V+LNLVL+++
Sbjct: 72 VLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYV 120
Query: 224 PETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGV 283
PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T V
Sbjct: 121 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 180
Query: 284 LKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
LKLCDFGSAK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP
Sbjct: 181 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
Query: 344 MFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAID 403
+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 241 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA 300
Query: 404 LISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 301 LCSRLLEYTPTARLTPLEACAHS-FFDELR 329
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 100 FFYSSGEKKDE 110
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/330 (64%), Positives = 257/330 (77%), Gaps = 12/330 (3%)
Query: 104 KISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIRE 163
K+S +KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I++
Sbjct: 1 KVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 60
Query: 164 MNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFM 223
+ + FK ++ ++ D +++ RL + SS +V+LNLVL+++
Sbjct: 61 VLQD-KRFK---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYV 109
Query: 224 PETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGV 283
PETVY+VA+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T V
Sbjct: 110 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 169
Query: 284 LKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
LKLCDFGSAK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP
Sbjct: 170 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
Query: 344 MFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAID 403
+FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI
Sbjct: 230 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA 289
Query: 404 LISRLLEYTPSSRISPLQVRSITPFLIELR 433
L SRLLEYTP++R++PL+ + + F ELR
Sbjct: 290 LCSRLLEYTPTARLTPLEACAHS-FFDELR 318
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 89 FFYSSGEKKDE 99
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 253/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVSYICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEF FPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQ K FKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 254/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 254/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 5 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 63
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 64 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 113
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 114 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 173
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 174 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 233
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 234 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 293
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 294 TPTARLTPLEACAHS-FFDELR 314
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 85 FFYSSGEKKDE 95
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 254/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 254/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 2 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 60
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++PETVY+VA
Sbjct: 61 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 110
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 111 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 170
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 171 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 230
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 231 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 290
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 291 TPTARLTPLEACAHS-FFDELR 311
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 82 FFYSSGEKKDE 92
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 253/322 (78%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ + F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-KRF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS V+LNLVL+++PETVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQDKRFKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKD 92
FFYSSG+KKD
Sbjct: 81 FFYSSGEKKD 90
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 410 bits (1053), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 251/322 (77%), Gaps = 12/322 (3%)
Query: 112 NKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 171
+KVTTVVATPGQGPDRPQE+SYT+T+V +G +V K+ + I+++ F
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAF 59
Query: 172 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVA 231
K ++ ++ D +++ RL + SS +V+LNLVL+++P TVY+VA
Sbjct: 60 K---------NRELQIMRKLDHCNIV-RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVA 109
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
+HYS++KQ P Y KLY+YQLFRSLAYIH GICHRDIKPQNLLL+P+T VLKLCDFGS
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
AK LVRGEPNVS ICSRYYRAPELIFGA DYT+ IDVWSAGCVLAELLLGQP+FPGDSGV
Sbjct: 170 AKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
DQLVEIIKVLGTPTREQIREMNPNYTEF FPQIK+HPW+KVFR RTPP+AI L SRLLEY
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289
Query: 412 TPSSRISPLQVRSITPFLIELR 433
TP++R++PL+ + + F ELR
Sbjct: 290 TPTARLTPLEACAHS-FFDELR 310
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKY 82
S VIGNGSFG+VYQAKL DSGELVAIKKVLQ K FKNRE+QIMR+L+H NIV+L+Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 83 FFYSSGDKKDE 93
FFYSSG+KKDE
Sbjct: 81 FFYSSGEKKDE 91
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 242/346 (69%), Gaps = 34/346 (9%)
Query: 99 PLEDMKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGV------DQLVE---- 148
PL +K++ NKV V+A+ G+ ++ +EI+YTN +V +G +LVE
Sbjct: 9 PLNGVKLNPLDDPNKVIKVLASDGKTGEQ-REIAYTNCKVIGNGSFGVVFQAKLVESDEV 67
Query: 149 IIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSR 208
IK + R + RE+ ++ R+ P+ +DL + Y+ +
Sbjct: 68 AIKKVLQDKRFKNREL------------------QIMRIVKHPNVVDL--KAFFYSNGDK 107
Query: 209 ISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHR 268
+VFLNLVLE++PETVY+ ++HY+K KQ P KLY+YQL RSLAYIH +GICHR
Sbjct: 108 KD--EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR 165
Query: 269 DIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDV 328
DIKPQNLLL+P +GVLKL DFGSAK L+ GEPNVS ICSRYYRAPELIFGA +YTT ID+
Sbjct: 166 DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDI 225
Query: 329 WSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHP 388
WS GCV+AEL+ GQP+FPG+SG+DQLVEIIKVLGTP+REQI+ MNPNY E KFPQI+ HP
Sbjct: 226 WSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP 285
Query: 389 WSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRA 434
+SKVFR RTPPDAIDLISRLLEYTPS+R++ ++ PF ELR
Sbjct: 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC-HPFFDELRT 330
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKYFFYSSG 88
VIGNGSFG+V+QAKL++S E VAIKKVLQDKRFKNRE+QIMR ++H N+V LK FFYS+G
Sbjct: 47 VIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105
Query: 89 DKKDE 93
DKKDE
Sbjct: 106 DKKDE 110
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 166/224 (74%), Gaps = 1/224 (0%)
Query: 215 FLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
+LN+++E++P+T++KV K + +S ++ P +YIYQLFR++ +IH LGICHRDIKPQN
Sbjct: 112 YLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN 171
Query: 275 LLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCV 334
LL+N + LKLCDFGSAK L+ EP+V+ ICSR+YRAPEL+ GA +YT ID+WS GCV
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 335 LAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFR 394
EL+LG+P+F G++ +DQLV II+++GTPT+EQ+ MNP+YTE +FP +K+ W K+
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291
Query: 395 VRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAVFEN 438
TP AIDL+ ++L Y P RI+P + + PF LR +E+
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMA-HPFFDHLRNSYES 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 139 SDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
++ +DQLV II+++GTPT+EQ+ MNP+YTE +FP +K+ W K+ TP AIDL+
Sbjct: 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303
Query: 199 RLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFP 242
++L Y P RI+P + + + + + K+ S NFP
Sbjct: 304 QILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNS----NFP 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIVKLKYFFYSSG 88
+G GSFGIV + ++SG+ A+KKVLQD R+KNRE+ IM+ L+H NI+KL +FY++G
Sbjct: 14 TLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTG 73
Query: 89 DKKDEPTNYPPLEDMKIS--TFSPRNKVTTVVATPGQ 123
D++ +P PP + K+ N +V+ P Q
Sbjct: 74 DEEPKPPQ-PPDDHNKLGGKNNGVNNHHKSVIVNPSQ 109
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 155/224 (69%), Gaps = 6/224 (2%)
Query: 214 VFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV--LGICHRDIK 271
++LN+V+E++P+T+++ ++Y + + P K++++QL RS+ +H+ + +CHRDIK
Sbjct: 99 IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIK 158
Query: 272 PQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSA 331
P N+L+N G LKLCDFGSAK L EPNV+YICSRYYRAPELIFG YTT +D+WS
Sbjct: 159 PHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218
Query: 332 GCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSK 391
GC+ AE++LG+P+F GD+ QL EI++VLG P+RE +R++NP++T+ K PWS
Sbjct: 219 GCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN 278
Query: 392 VF---RVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIEL 432
VF ++ +A DL+S LL+Y P R+ P + P+ EL
Sbjct: 279 VFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC-HPYFDEL 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 139 SDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVF---RVRTPPDAID 195
D+ QL EI++VLG P+RE +R++NP++T+ K PWS VF ++ +A D
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293
Query: 196 LISRLLEYTPSSRISPLQVFLN 217
L+S LL+Y P R+ P + +
Sbjct: 294 LLSALLQYLPEERMKPYEALCH 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRR---LEHSNIVKLKYFFY 85
+ G G+FG V K +G VAIKKV+QD RF+NRE+QIM+ L H NIV+L+ +FY
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFY 89
Query: 86 SSGDK 90
+ G++
Sbjct: 90 TLGER 94
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 148/299 (49%), Gaps = 38/299 (12%)
Query: 137 RVSDSGVDQLVEIIKV-LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAID 195
+ D +Q+V I K+ LG + + E K Q SHP +
Sbjct: 28 KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP--------------N 73
Query: 196 LISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFR 255
+I L + S IS LV +FM + + K S + K Y+ +
Sbjct: 74 IIGLLDAFGHKSNIS-------LVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQ 123
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRA 312
L Y+H I HRD+KP NLLL+ E GVLKL DFG AK G PN +Y + +R+YRA
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRA 180
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREM 372
PEL+FGA Y +D+W+ GC+LAELLL P PGDS +DQL I + LGTPT EQ +M
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 373 N--PNYTEFK-FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPF 428
P+Y FK FP I P +F D +DLI L + P +RI+ Q + F
Sbjct: 241 CSLPDYVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN---------REMQIMRRLEHSNIVKL 80
+G G F VY+A+ ++ ++VAIKK+ R + RE+++++ L H NI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 139/240 (57%), Gaps = 19/240 (7%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + +S + V L LV EFM + + KV ++K
Sbjct: 63 PSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKV---LDENKTGLQDS 119
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K+Y+YQL R +A+ H I HRD+KPQNLL+N + G LKL DFG A+ G P SY
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD-GALKLADFGLARAF--GIPVRSY 176
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAP+++ G+ Y+T +D+WS GC+ AE++ G+P+FPG + DQL +I +L
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
Query: 362 GTPT-RE--QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
GTP RE Q++E+ P + + F + PWS + + IDL+S +L + P+ RIS
Sbjct: 237 GTPNPREWPQVQEL-PLWKQRTFQVFEKKPWSSIIPGFC-QEGIDLLSNMLCFDPNKRIS 294
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 16 YFSDLDNSLAQKTVIGNGSFGIVYQAKLLDS-GELVAIKKVLQDKRFKN------REMQI 68
YF L + +G G++G+VY+AK DS G +VA+K++ D + RE+ +
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 69 MRRLEHSNIVKL 80
++ L H NIV L
Sbjct: 73 LKELHHPNIVSL 84
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 144 DQLVEIIKVLGTPT-RE--QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 200
DQL +I +LGTP RE Q++E+ P + + F + PWS + + IDL+S +
Sbjct: 227 DQLPKIFSILGTPNPREWPQVQEL-PLWKQRTFQVFEKKPWSSIIPGFC-QEGIDLLSNM 284
Query: 201 LEYTPSSRIS 210
L + P+ RIS
Sbjct: 285 LCFDPNKRIS 294
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 139/240 (57%), Gaps = 19/240 (7%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + +S + V L LV EFM + + KV ++K
Sbjct: 63 PSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKV---LDENKTGLQDS 119
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K+Y+YQL R +A+ H I HRD+KPQNLL+N + G LKL DFG A+ G P SY
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD-GALKLADFGLARAF--GIPVRSY 176
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAP+++ G+ Y+T +D+WS GC+ AE++ G+P+FPG + DQL +I +L
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
Query: 362 GTPT-RE--QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
GTP RE Q++E+ P + + F + PWS + + IDL+S +L + P+ RIS
Sbjct: 237 GTPNPREWPQVQEL-PLWKQRTFQVFEKKPWSSIIPGFC-QEGIDLLSNMLCFDPNKRIS 294
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 16 YFSDLDNSLAQKTVIGNGSFGIVYQAKLLDS-GELVAIKKVLQDKRFKN------REMQI 68
YF L + +G G++G+VY+AK DS G +VA+K++ D + RE+ +
Sbjct: 15 YFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRIRLDAEDEGIPSTAIREISL 72
Query: 69 MRRLEHSNIVKL 80
++ L H NIV L
Sbjct: 73 LKELHHPNIVSL 84
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 144 DQLVEIIKVLGTPT-RE--QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 200
DQL +I +LGTP RE Q++E+ P + + F + PWS + + IDL+S +
Sbjct: 227 DQLPKIFSILGTPNPREWPQVQEL-PLWKQRTFQVFEKKPWSSIIPGFC-QEGIDLLSNM 284
Query: 201 LEYTPSSRIS 210
L + P+ RIS
Sbjct: 285 LCFDPNKRIS 294
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 23/223 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 158 N-TTXDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREM----NPNYTEFKFPQIKS 386
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + NY P
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNK 272
Query: 387 HPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 273 VPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREM----NPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I+ +LG+P++E + + NY P PW+++F A+DL+
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLD 291
Query: 199 RLLEYTPSSRISPLQVFLNLVLE 221
++L + P RI Q + LE
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 21/224 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 160 N-TTSDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKV 275
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIE 431
PW+++F A+DL+ ++L + P RI Q + P+L +
Sbjct: 276 PWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALA-HPYLAQ 317
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFP-NADSKALDLLDK 294
Query: 200 LLEYTPSSRISPLQVF 215
+L + P RI Q
Sbjct: 295 MLTFNPHKRIEVEQAL 310
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 178 N-TTXDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 294 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 312
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 313 MLTFNPHKRIEVEQALAHPYLE 334
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 162 N-TTXDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 278 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 21/224 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 160 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIE 431
PW+++F A+DL+ ++L + P RI Q + P+L +
Sbjct: 276 PWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALA-HPYLAQ 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP-NADSKALDLLDK 294
Query: 200 LLEYTPSSRISPLQVF 215
+L + P RI Q
Sbjct: 295 MLTFNPHKRIEVEQAL 310
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 162 N-TTXDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 278 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 158 N-TTXDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 274 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 292
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLE 314
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 111 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 165
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 166 NT-TCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 221
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 222 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 281
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 282 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 321
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 242 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 300
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 301 MLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 158 NT-TCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 274 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 292
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLE 314
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 162 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 278 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 105 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 160 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 215
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 216 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 276 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 315
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 294
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLE 316
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 163 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 218
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 219 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 278
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 279 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 297
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 298 MLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 109 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 163
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 164 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 219
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 220 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 279
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 280 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 319
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 240 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 298
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 299 MLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 100 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 154
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 155 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 210
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 211 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 270
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 271 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 231 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 289
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 290 MLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 162 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 278 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 156 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 212 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 272 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 232 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 290
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 291 MLTFNPHKRIEVEQALAHPYLE 312
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 158 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 274 PWNRLFP-NADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP-NADSKALDLLDK 292
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLE 314
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 123 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 178 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 294 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 333
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 312
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 313 MLTFNPHKRIEVEQALAHPYLE 334
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKCQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 162 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + P
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 278 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 21/222 (9%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 101 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+CDFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 156 N-TTCDLKICDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 211
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSH 387
GC+LAE+L +P+FPG +DQL I+ +LG+P +E + + P
Sbjct: 212 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 388 PWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 272 PWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P +E + + P PW+++F A+DL+ +
Sbjct: 232 LDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 290
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 291 MLTFNPHKRIEVEQALAHPYLE 312
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 125/221 (56%), Gaps = 18/221 (8%)
Query: 208 RISPLQVFLN--LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGI 265
R S L+ + +V + M +YK+ K S + C++ +YQ+ R L YIH +
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI-CYF----LYQILRGLKYIHSANV 165
Query: 266 CHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY----ICSRYYRAPELIFGAID 321
HRD+KP NLL+N T LK+CDFG A+ + + + +R+YRAPE++ +
Sbjct: 166 LHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 322 YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ----IREMNPNYT 377
YT ID+WS GC+LAE+L +P+FPG +DQL I+ +LG+P++E I NY
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYL 284
Query: 378 EFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+ P W+K+F ++ A+DL+ R+L + P+ RI+
Sbjct: 285 Q-SLPSKTKVAWAKLF-PKSDSKALDLLDRMLTFNPNKRIT 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 143 VDQLVEIIKVLGTPTREQ----IREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I+ +LG+P++E I NY + P W+K+F ++ A+DL+
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLF-PKSDSKALDLLD 311
Query: 199 RLLEYTPSSRISPLQVFLNLVLE 221
R+L + P+ RI+ + + LE
Sbjct: 312 RMLTFNPNKRITVEEALAHPYLE 334
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 4 VNGELGFAKNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV--LQDKRF 61
V GE+ K + D+ Q IG G++G+V A VAIKK+ + + +
Sbjct: 27 VPGEVEMVKGQPF--DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTY 84
Query: 62 KNR---EMQIMRRLEHSNIVKLKYFFYSS 87
R E+QI+ R H N++ ++ +S
Sbjct: 85 CQRTLREIQILLRFRHENVIGIRDILRAS 113
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 107 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSY----ICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N T LK+CDFG A+ + + + +R+YRAPE++ + YT ID+WS GC
Sbjct: 162 N-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 334 VLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWS 390
+LAE+L +P+FPG +DQL I+ +LG+P++E + + P PW+
Sbjct: 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 280
Query: 391 KVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
++F A+DL+ ++L + P RI Q + P+L
Sbjct: 281 RLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 108 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSY----ICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N T LK+CDFG A+ + + + +R+YRAPE++ + YT ID+WS GC
Sbjct: 163 N-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 334 VLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWS 390
+LAE+L +P+FPG +DQL I+ +LG+P++E + + P PW+
Sbjct: 222 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 281
Query: 391 KVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
++F A+DL+ ++L + P RI Q + P+L
Sbjct: 282 RLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIR---EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I+ +LG+P++E + + P PW+++F A+DL+ +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 297
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+L + P RI Q + LE
Sbjct: 298 MLTFNPHKRIEVEQALAHPYLE 319
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 16/232 (6%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKV-AKHYSKSKQNFPCFYTKLYIYQL 253
++I L +TP+S + F LV+ FM + K+ +S+ K + +YQ+
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFY-LVMPFMQTDLQKIMGMEFSEEKIQY-------LVYQM 153
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+ L YIH G+ HRD+KP NL +N E LK+ DFG A+H Y+ +R+YRAP
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDFGLARH--ADAEMTGYVVTRWYRAP 210
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E+I + Y +D+WS GC++AE+L G+ +F G +DQL +I+KV G P E ++++N
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270
Query: 374 PNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ PQ ++++F R P A DL+ ++LE R++ Q
Sbjct: 271 DKAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQA 321
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL +I+KV G P E ++++N + PQ ++++F R P A DL+ +
Sbjct: 248 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEK 306
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+LE R++ Q + E
Sbjct: 307 MLELDVDKRLTAAQALTHPFFE 328
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKV---LQDKRFKN---REMQIMRRLEHSNIVKL 80
T +G+G++G V A SGE VAIKK+ Q + F RE+ +++ ++H N++ L
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 102
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 159
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 273
Query: 415 SRIS 418
RIS
Sbjct: 274 KRIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 23/223 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V + M +YK+ K S + C++ +YQ+ R L YIH + HRD+KP NLLL
Sbjct: 103 IVQDLMETDLYKLLKTQHLSNDHI-CYF----LYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWS 330
N T LK+ DFG A+ +P+ Y+ +R+YRAPE++ + YT ID+WS
Sbjct: 158 N-TTXDLKIXDFGLAR---VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 213
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREM----NPNYTEFKFPQIKS 386
GC+LAE+L +P+FPG +DQL I+ +LG+P++E + + NY P
Sbjct: 214 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNK 272
Query: 387 HPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
PW+++F A+DL+ ++L + P RI Q + P+L
Sbjct: 273 VPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALA-HPYL 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREM----NPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I+ +LG+P++E + + NY P PW+++F A+DL+
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLD 291
Query: 199 RLLEYTPSSRISPLQVFLNLVLE 221
++L + P RI Q + LE
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 102
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 159
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 273
Query: 416 RIS 418
RIS
Sbjct: 274 RIS 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 102
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 159
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 273
Query: 415 SRIS 418
RIS
Sbjct: 274 KRIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 103
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 160
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 274
Query: 415 SRIS 418
RIS
Sbjct: 275 KRIS 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 207 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 260
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 261 GRSLLSQMLHYDPNKRIS 278
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 103
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 160
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 274
Query: 416 RIS 418
RIS
Sbjct: 275 RIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 103
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 160
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 274
Query: 416 RIS 418
RIS
Sbjct: 275 RIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 44 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 101
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 158
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 219 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 272
Query: 415 SRIS 418
RIS
Sbjct: 273 KRIS 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 103
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 160
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 274
Query: 416 RIS 418
RIS
Sbjct: 275 RIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 102
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 159
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 273
Query: 416 RIS 418
RIS
Sbjct: 274 RIS 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 103
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 160
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 274
Query: 416 RIS 418
RIS
Sbjct: 275 RIS 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+ K+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 102
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 159
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 273
Query: 416 RIS 418
RIS
Sbjct: 274 RIS 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+ K+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 102
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 159
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 273
Query: 415 SRIS 418
RIS
Sbjct: 274 KRIS 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 44 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 101
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 158
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 219 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 272
Query: 415 SRIS 418
RIS
Sbjct: 273 KRIS 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 102
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 159
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 273
Query: 415 SRIS 418
RIS
Sbjct: 274 KRIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 104
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 161
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 222 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 275
Query: 416 RIS 418
RIS
Sbjct: 276 RIS 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 207 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 260
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 261 GRSLLSQMLHYDPNKRIS 278
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 47 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 104
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 161
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 222 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 275
Query: 415 SRIS 418
RIS
Sbjct: 276 KRIS 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 208 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 261
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 262 GRSLLSQMLHYDPNKRIS 279
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 103
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 160
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 274
Query: 415 SRIS 418
RIS
Sbjct: 275 KRIS 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 207 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 260
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 261 GRSLLSQMLHYDPNKRIS 278
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 16/232 (6%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKV-AKHYSKSKQNFPCFYTKLYIYQL 253
++I L +TP+S + F LV+ FM + K+ +S+ K + +YQ+
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFY-LVMPFMQTDLQKIMGLKFSEEKIQY-------LVYQM 135
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+ L YIH G+ HRD+KP NL +N E LK+ DFG A+H Y+ +R+YRAP
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDFGLARH--ADAEMTGYVVTRWYRAP 192
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E+I + Y +D+WS GC++AE+L G+ +F G +DQL +I+KV G P E ++++N
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252
Query: 374 PNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ PQ ++++F R P A DL+ ++LE R++ Q
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQA 303
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL +I+KV G P E ++++N + PQ ++++F R P A DL+ +
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-RASPQAADLLEK 288
Query: 200 LLEYTPSSRISPLQVFLNLVLE 221
+LE R++ Q + E
Sbjct: 289 MLELDVDKRLTAAQALTHPFFE 310
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKV---LQDKRFKN---REMQIMRRLEHSNIVKL 80
T +G+G++G V A SGE VAIKK+ Q + F RE+ +++ ++H N++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 48 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 105
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 162
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 223 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 276
Query: 415 SRIS 418
RIS
Sbjct: 277 KRIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 47 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 104
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 161
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 222 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 275
Query: 415 SRIS 418
RIS
Sbjct: 276 KRIS 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 208 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 261
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 262 GRSLLSQMLHYDPNKRIS 279
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 49 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 106
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 163
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 224 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 277
Query: 415 SRIS 418
RIS
Sbjct: 278 KRIS 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 210 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 263
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 264 GRSLLSQMLHYDPNKRIS 281
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 48 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 105
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 162
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 223 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 276
Query: 415 SRIS 418
RIS
Sbjct: 277 KRIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 49 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 106
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 163
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 164 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 224 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 277
Query: 415 SRIS 418
RIS
Sbjct: 278 KRIS 281
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 210 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 263
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 264 GRSLLSQMLHYDPNKRIS 281
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 110
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 167
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 228 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 281
Query: 416 RIS 418
RIS
Sbjct: 282 RIS 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 213 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 266
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 267 GRSLLSQMLHYDPNKRIS 284
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 110
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 167
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 228 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 281
Query: 416 RIS 418
RIS
Sbjct: 282 RIS 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 213 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 266
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 267 GRSLLSQMLHYDPNKRIS 284
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 195 DLISRLLEYTPSSRISPL-QVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQL 253
++I L +TP++ I +V+L V M + + K + S + + + +YQL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYL--VTTLMGADLNNIVKSQALSDE-----HVQFLVYQL 140
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
R L YIH GI HRD+KP N+ +N E L++ DFG A+ E Y+ +R+YRAP
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLARQA--DEEMTGYVATRWYRAP 197
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E++ + Y +D+WS GC++AELL G+ +FPG +DQL I++V+GTP+ E + +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 257
Query: 374 PNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ P + S +FR P AIDL+ R+L R+S +
Sbjct: 258 SEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGRMLVLDSDQRVSAAEA 308
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I++V+GTP+ E + +++ + P + S +FR P AIDL+ R
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGR 293
Query: 200 LLEYTPSSRISPLQVFLN 217
+L R+S + +
Sbjct: 294 MLVLDSDQRVSAAEALAH 311
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKLKYF 83
+G+G++G V A + VA+KK+ L R RE+++++ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 84 F 84
F
Sbjct: 96 F 96
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 103
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KP+NLL+N E G +KL DFG A+ G P +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAF--GVPVRT 160
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 274
Query: 415 SRIS 418
RIS
Sbjct: 275 KRIS 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 207 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 260
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 261 GRSLLSQMLHYDPNKRIS 278
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPLP 103
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + L++ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 160
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 274
Query: 416 RIS 418
RIS
Sbjct: 275 RIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 195 DLISRLLEYTPSSRISPL-QVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQL 253
++I L +TP++ I +V+L V M + + K + S + + + +YQL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYL--VTTLMGADLNNIVKCQALSDE-----HVQFLVYQL 140
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
R L YIH GI HRD+KP N+ +N E L++ DFG A+ E Y+ +R+YRAP
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLARQA--DEEMTGYVATRWYRAP 197
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E++ + Y +D+WS GC++AELL G+ +FPG +DQL I++V+GTP+ E + +++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 257
Query: 374 PNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ P + S +FR P AIDL+ R+L R+S +
Sbjct: 258 SEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGRMLVLDSDQRVSAAEA 308
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I++V+GTP+ E + +++ + P + S +FR P AIDL+ R
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGR 293
Query: 200 LLEYTPSSRISPLQVFLN 217
+L R+S + +
Sbjct: 294 MLVLDSDQRVSAAEALAH 311
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKLKYF 83
+G+G++G V A + VA+KK+ L R RE+++++ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 84 F 84
F
Sbjct: 96 F 96
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 131/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + K + + P
Sbjct: 47 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGIPL 104
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KP+NLL+N E G +KL DFG A+ G P +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAF--GVPVRT 161
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 222 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 275
Query: 415 SRIS 418
RIS
Sbjct: 276 KRIS 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 208 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 261
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 262 GRSLLSQMLHYDPNKRIS 279
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ A+ Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 195 DLISRLLEYTPSSRISPL-QVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQL 253
++I L +TP++ I +V+L V M + + K + S + + + +YQL
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYL--VTTLMGADLNNIVKCQALSDE-----HVQFLVYQL 132
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
R L YIH GI HRD+KP N+ +N E L++ DFG A+ E Y+ +R+YRAP
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVN-EDCELRILDFGLARQA--DEEMTGYVATRWYRAP 189
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E++ + Y +D+WS GC++AELL G+ +FPG +DQL I++V+GTP+ E + +++
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKIS 249
Query: 374 PNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ P + S +FR P AIDL+ R+L R+S +
Sbjct: 250 SEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGRMLVLDSDQRVSAAEA 300
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+DQL I++V+GTP+ E + +++ + P + S +FR P AIDL+ R
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPL-AIDLLGR 285
Query: 200 LLEYTPSSRISPLQVFLN 217
+L R+S + +
Sbjct: 286 MLVLDSDQRVSAAEALAH 303
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKLKYF 83
+G+G++G V A + VA+KK+ L R RE+++++ L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 84 F 84
F
Sbjct: 88 F 88
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV EF+ + + + + P
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMD--ASALTGIPLP 106
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 163
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 223
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 224 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 277
Query: 416 RIS 418
RIS
Sbjct: 278 RIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + K + + P
Sbjct: 46 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD--ASALTGIPL 103
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KP+NLL+N E G +KL DFG A+ G P +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAF--GVPVRT 160
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 221 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 274
Query: 415 SRIS 418
RIS
Sbjct: 275 KRIS 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 207 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 260
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 261 GRSLLSQMLHYDPNKRIS 278
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + K + + P
Sbjct: 48 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD--ASALTGIPL 105
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KP+NLL+N E G +KL DFG A+ G P +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAF--GVPVRT 162
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 223 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 276
Query: 415 SRIS 418
RIS
Sbjct: 277 KRIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + + P
Sbjct: 47 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD--ASALTGIPL 104
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 161
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 222 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 275
Query: 415 SRIS 418
RIS
Sbjct: 276 KRIS 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 208 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 261
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 262 GRSLLSQMLHYDPNKRIS 279
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 124/223 (55%), Gaps = 15/223 (6%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYT-KLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L LV E++ + + K Y N + KL+++QL R LAY H + HRD+KPQN
Sbjct: 75 LTLVFEYLDKDL----KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN 130
Query: 275 LLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRAPELIFGAIDYTTKIDVWSA 331
LL+N E G LKL DFG A+ + P +Y + + +YR P+++ G+ DY+T+ID+W
Sbjct: 131 LLIN-ERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGV 187
Query: 332 GCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREM--NPNYTEFKFPQIKSHPW 389
GC+ E+ G+P+FPG + +QL I ++LGTPT E + N + + +P+ ++
Sbjct: 188 GCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEAL 247
Query: 390 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIEL 432
R D DL+++LL++ +RIS PF + L
Sbjct: 248 LS-HAPRLDSDGADLLTKLLQFEGRNRISAEDAMK-HPFFLSL 288
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 144 DQLVEIIKVLGTPTREQIREM--NPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLL 201
+QL I ++LGTPT E + N + + +P+ ++ R D DL+++LL
Sbjct: 208 EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLS-HAPRLDSDGADLLTKLL 266
Query: 202 EYTPSSRIS 210
++ +RIS
Sbjct: 267 QFEGRNRIS 275
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKL 80
+G G++ VY+ K + LVA+K++ + RE+ +++ L+H+NIV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 130/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + + + P
Sbjct: 45 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMD--ASALTGIPL 102
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KP+NLL+N E G +KL DFG A+ G P +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTE-GAIKLADFGLARAF--GVPVRT 159
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 273
Query: 415 SRIS 418
RIS
Sbjct: 274 KRIS 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 206 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 259
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 260 GRSLLSQMLHYDPNKRIS 277
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLARH--TDDEMTGY 188
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 249 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 421 QVRSITPF 428
Q + F
Sbjct: 307 QALAHAYF 314
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 235 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 292
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 293 KMLVLDSDKRITAAQAL 309
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 83 FF 84
F
Sbjct: 95 VF 96
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV E + + + K + + P
Sbjct: 48 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMD--ASALTGIPL 105
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 162
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 223 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 276
Query: 415 SRIS 418
RIS
Sbjct: 277 KRIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 25/244 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPC 243
P AI IS L E + + L V L LV EF+ + + + P
Sbjct: 48 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD--ASALTGIPL 105
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS 303
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRT 162
Query: 304 Y---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
Y + + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I +
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 361 LGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPS 414
LGTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 223 LGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPN 276
Query: 415 SRIS 418
RIS
Sbjct: 277 KRIS 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 209 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 262
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 263 GRSLLSQMLHYDPNKRIS 280
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLARH--TDDEMTGY 184
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 245 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 421 QV 422
Q
Sbjct: 303 QA 304
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 231 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 288
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 289 KMLVLDSDKRITAAQAL 305
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 83 FF 84
F
Sbjct: 91 VF 92
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TADEMTGY 189
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 250 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 421 QV 422
Q
Sbjct: 308 QA 309
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 293
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 294 KMLVLDSDKRITAAQAL 310
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 83 FF 84
F
Sbjct: 96 VF 97
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TADEMTGY 189
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 250 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 421 QV 422
Q
Sbjct: 308 QA 309
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 293
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 294 KMLVLDSDKRITAAQAL 310
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 83 FF 84
F
Sbjct: 96 VF 97
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TADEMTGY 189
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 250 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 421 QV 422
Q
Sbjct: 308 QA 309
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 293
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 294 KMLVLDSDKRITAAQAL 310
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 83 FF 84
F
Sbjct: 96 VF 97
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 4/171 (2%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR-GEPNVSYICS 307
Y++Q+ + + H I HRDIKP+N+L++ ++GV+KLCDFG A+ L GE + +
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT--PT 365
R+YRAPEL+ G + Y +DVW+ GC++ E+ +G+P+FPGDS +DQL I+ LG P
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSR 416
+++ NP + + P+IK + + IDL + L P R
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQD------KRFKNREMQIMRRLEHSNIVKL 80
++G GS+G+V + + D+G +VAIKK L+ K+ RE++++++L H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGY 193
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 254 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 421 QV 422
Q
Sbjct: 312 QA 313
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 240 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 297
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 298 KMLVLDSDKRITAAQAL 314
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 83 FF 84
F
Sbjct: 100 VF 101
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGY 187
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 248 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 421 QV 422
Q
Sbjct: 306 QA 307
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 234 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 291
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 292 KMLVLDSDKRITAAQAL 308
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
IG+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 83 FF 84
F
Sbjct: 94 VF 95
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGY 187
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 248 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 421 QV 422
Q
Sbjct: 306 QA 307
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 234 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 291
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 292 KMLVLDSDKRITAAQAL 308
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 83 FF 84
F
Sbjct: 94 VF 95
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QVRSITPF 428
Q + F
Sbjct: 301 QALAHAYF 308
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 136 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 192
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 253 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 421 QVRSITPF 428
Q + F
Sbjct: 311 QALAHAYF 318
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 239 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 296
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 297 KMLVLDSDKRITAAQAL 313
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 83 FF 84
F
Sbjct: 99 VF 100
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 188
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 249 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 421 QVRSITPF 428
Q + F
Sbjct: 307 QALAHAYF 314
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 235 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 292
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 293 KMLVLDSDKRITAAQAL 309
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 83 FF 84
F
Sbjct: 95 VF 96
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 263 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 421 QVRSITPF 428
Q + F
Sbjct: 321 QALAHAYF 328
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 306
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 307 KMLVLDSDKRITAAQAL 323
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 83 FF 84
F
Sbjct: 109 VF 110
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 189
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 250 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 421 QV 422
Q
Sbjct: 308 QA 309
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 293
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 294 KMLVLDSDKRITAAQAL 310
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 83 FF 84
F
Sbjct: 96 VF 97
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 178
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 239 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 421 QVRSITPF 428
Q + F
Sbjct: 297 QALAHAYF 304
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 282
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 283 KMLVLDSDKRITAAQAL 299
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 83 FF 84
F
Sbjct: 85 VF 86
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 194
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 255 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 421 QV 422
Q
Sbjct: 313 QA 314
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 241 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 298
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 299 KMLVLDSDKRITAAQAL 315
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 83 FF 84
F
Sbjct: 101 VF 102
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 193
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 254 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 421 QVRSITPF 428
Q + F
Sbjct: 312 QALAHAYF 319
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 240 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 297
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 298 KMLVLDSDKRITAAQAL 314
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 83 FF 84
F
Sbjct: 100 VF 101
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 184
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 245 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 421 QV 422
Q
Sbjct: 303 QA 304
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 231 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 288
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 289 KMLVLDSDKRITAAQAL 305
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 83 FF 84
F
Sbjct: 91 VF 92
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 187
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 248 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 421 QV 422
Q
Sbjct: 306 QA 307
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 234 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 291
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 292 KMLVLDSDKRITAAQAL 308
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 83 FF 84
F
Sbjct: 94 VF 95
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 125 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 181
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 242 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 421 QV 422
Q
Sbjct: 300 QA 301
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 228 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 285
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 286 KMLVLDSDKRITAAQAL 302
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 83 FF 84
F
Sbjct: 88 VF 89
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 187
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 248 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 421 QVRSITPF 428
Q + F
Sbjct: 306 QALAHAYF 313
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 234 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 291
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 292 KMLVLDSDKRITAAQAL 308
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 83 FF 84
F
Sbjct: 94 VF 95
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 201
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 262 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 421 QVRSITPF 428
Q + F
Sbjct: 320 QALAHAYF 327
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 248 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 305
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 306 KMLVLDSDKRITAAQAL 322
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 83 FF 84
F
Sbjct: 108 VF 109
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 188
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 249 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 421 QVRSITPF 428
Q + F
Sbjct: 307 QALAHAYF 314
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 235 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 292
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 293 KMLVLDSDKRITAAQAL 309
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 83 FF 84
F
Sbjct: 95 VF 96
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMXGY 205
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 266 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 421 QVRSITPF 428
Q + F
Sbjct: 324 QALAHAYF 331
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 252 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 309
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 310 KMLVLDSDKRITAAQAL 326
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 83 FF 84
F
Sbjct: 112 VF 113
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 194
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 255 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 421 QV 422
Q
Sbjct: 313 QA 314
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 241 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 298
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 299 KMLVLDSDKRITAAQAL 315
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 83 FF 84
F
Sbjct: 101 VF 102
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 194
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 255 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 421 QV 422
Q
Sbjct: 313 QA 314
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 241 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 298
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 299 KMLVLDSDKRITAAQAL 315
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 83 FF 84
F
Sbjct: 101 VF 102
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 188
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 249 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 421 QVRSITPF 428
Q + F
Sbjct: 307 QALAHAYF 314
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 235 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 292
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 293 KMLVLDSDKRITAAQAL 309
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 83 FF 84
F
Sbjct: 95 VF 96
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 184
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 245 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 421 QVRSITPF 428
Q + F
Sbjct: 303 QALAHAYF 310
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 231 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 288
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 289 KMLVLDSDKRITAAQAL 305
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 83 FF 84
F
Sbjct: 91 VF 92
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 178
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 239 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 421 QVRSITPF 428
Q + F
Sbjct: 297 QALAHAYF 304
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 282
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 283 KMLVLDSDKRITAAQAL 299
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 83 FF 84
F
Sbjct: 85 VF 86
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 205
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 266 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 421 QVRSITPF 428
Q + F
Sbjct: 324 QALAHAYF 331
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 252 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 309
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 310 KMLVLDSDKRITAAQAL 326
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 83 FF 84
F
Sbjct: 112 VF 113
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 184
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 245 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 421 QV 422
Q
Sbjct: 303 QA 304
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 231 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 288
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 289 KMLVLDSDKRITAAQAL 305
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 83 FF 84
F
Sbjct: 91 VF 92
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 178
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 239 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 421 QV 422
Q
Sbjct: 297 QA 298
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 282
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 283 KMLVLDSDKRITAAQAL 299
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 83 FF 84
F
Sbjct: 85 VF 86
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 179
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 240 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 421 QV 422
Q
Sbjct: 298 QA 299
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 226 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 283
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 284 KMLVLDSDKRITAAQAL 300
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 83 FF 84
F
Sbjct: 86 VF 87
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 179
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 240 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 421 QVRSITPF 428
Q + F
Sbjct: 298 QALAHAYF 305
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 226 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 283
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 284 KMLVLDSDKRITAAQAL 300
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 83 FF 84
F
Sbjct: 86 VF 87
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 263 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 421 QV 422
Q
Sbjct: 321 QA 322
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 306
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 307 KMLVLDSDKRITAAQAL 323
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 83 FF 84
F
Sbjct: 109 VF 110
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 124 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 180
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 241 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 421 QV 422
Q
Sbjct: 299 QA 300
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 227 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 284
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 285 KMLVLDSDKRITAAQAL 301
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 83 FF 84
F
Sbjct: 87 VF 88
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 201
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 262 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 421 QVRSITPF 428
Q + F
Sbjct: 320 QALAHAYF 327
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 248 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 305
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 306 KMLVLDSDKRITAAQAL 322
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 83 FF 84
F
Sbjct: 108 VF 109
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 25/243 (10%)
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCF 244
P AI IS L E + + L V L LV E + + + + + P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMD--ASALTGIPLP 102
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
K Y++QL + LA+ H + HRD+KPQNLL+N E G +KL DFG A+ G P +Y
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF--GVPVRTY 159
Query: 305 ---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + +YRAPE++ G Y+T +D+WS GC+ AE++ + +FPGDS +DQL I + L
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 362 GTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---DAIDLISRLLEYTPSS 415
GTP + M P+Y FP+ +SKV PP D L+S++L Y P+
Sbjct: 220 GTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDEDGRSLLSQMLHYDPNK 273
Query: 416 RIS 418
RIS
Sbjct: 274 RIS 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ +GE+VA+KK+ D + RE+ +++ L H NIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 139 SDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPP---D 192
DS +DQL I + LGTP + M P+Y FP+ +SKV PP D
Sbjct: 205 GDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPPLDED 258
Query: 193 AIDLISRLLEYTPSSRIS 210
L+S++L Y P+ RIS
Sbjct: 259 GRSLLSQMLHYDPNKRIS 276
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG +H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLCRH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMAGF 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QVRSITPF 428
Q + F
Sbjct: 301 QALAHAYF 308
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + +
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMAGF 178
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 239 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 421 QVRSITPF 428
Q + F
Sbjct: 297 QALAHAYF 304
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 282
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 283 KMLVLDSDKRITAAQAL 299
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 83 FF 84
F
Sbjct: 85 VF 86
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 16/185 (8%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY- 304
K ++ QL +AY H + HRD+KPQNLL+N E G LK+ DFG A+ G P Y
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE-GELKIADFGLARAF--GIPVRKYT 158
Query: 305 --ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
I + +YRAP+++ G+ Y+T ID+WS GC+ AE++ G P+FPG S DQL+ I ++LG
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 363 TPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRI 417
TP + PN TE F + PW F IDL+S++L+ P+ RI
Sbjct: 219 TPNSKNW----PNVTELPKYDPNFTVYEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRI 273
Query: 418 SPLQV 422
+ Q
Sbjct: 274 TAKQA 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ + GE A+KK+ +K + RE+ I++ L+HSNIVKL
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 141 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAID 195
S DQL+ I ++LGTP + PN TE F + PW F ID
Sbjct: 205 SEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTVYEPLPWES-FLKGLDESGID 259
Query: 196 LISRLLEYTPSSRISPLQVF 215
L+S++L+ P+ RI+ Q
Sbjct: 260 LLSKMLKLDPNQRITAKQAL 279
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMAGF 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ D+G A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDYGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QVRSITPF 428
Q + F
Sbjct: 301 QALAHAYF 308
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 16/185 (8%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY- 304
K ++ QL +AY H + HRD+KPQNLL+N E G LK+ DFG A+ G P Y
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE-GELKIADFGLARAF--GIPVRKYT 158
Query: 305 --ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
+ + +YRAP+++ G+ Y+T ID+WS GC+ AE++ G P+FPG S DQL+ I ++LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILG 218
Query: 363 TPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRI 417
TP + PN TE F + PW + IDL+S++L+ P+ RI
Sbjct: 219 TPNSKNW----PNVTELPKYDPNFTVYEPLPWESFLK-GLDESGIDLLSKMLKLDPNQRI 273
Query: 418 SPLQV 422
+ Q
Sbjct: 274 TAKQA 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ + GE A+KK+ +K + RE+ I++ L+HSNIVKL
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 141 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAID 195
S DQL+ I ++LGTP + PN TE F + PW + ID
Sbjct: 205 SEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTVYEPLPWESFLK-GLDESGID 259
Query: 196 LISRLLEYTPSSRISPLQVF 215
L+S++L+ P+ RI+ Q
Sbjct: 260 LLSKMLKLDPNQRITAKQAL 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 16/185 (8%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY- 304
K ++ QL +AY H + HRD+KPQNLL+N E G LK+ DFG A+ G P Y
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE-GELKIADFGLARAF--GIPVRKYT 158
Query: 305 --ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
+ + +YRAP+++ G+ Y+T ID+WS GC+ AE++ G P+FPG S DQL+ I ++LG
Sbjct: 159 HEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
Query: 363 TPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRI 417
TP + PN TE F + PW + IDL+S++L+ P+ RI
Sbjct: 219 TPNSKNW----PNVTELPKYDPNFTVYEPLPWESFLK-GLDESGIDLLSKMLKLDPNQRI 273
Query: 418 SPLQV 422
+ Q
Sbjct: 274 TAKQA 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKL 80
IG G++G+VY+A+ + GE A+KK+ +K + RE+ I++ L+HSNIVKL
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 141 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF-----KFPQIKSHPWSKVFRVRTPPDAID 195
S DQL+ I ++LGTP + PN TE F + PW + ID
Sbjct: 205 SEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTVYEPLPWESFLK-GLDESGID 259
Query: 196 LISRLLEYTPSSRISPLQVF 215
L+S++L+ P+ RI+ Q
Sbjct: 260 LLSKMLKLDPNQRITAKQAL 279
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ FG A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILGFGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QVRSITPF 428
Q + F
Sbjct: 301 QALAHAYF 308
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGX 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ D G A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDAGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H + Y
Sbjct: 155 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMTGY 211
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG ++QL +I+++ GTP
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
Query: 365 TREQIREMNPNYTEFKF----PQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
I M P++ + PQ+ ++ VF + P A+DL+ ++L RI+
Sbjct: 272 PASVISRM-PSHEARNYINSLPQMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRIT 327
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKL 80
+G+G++G V + + SG +A+KK ++ KR RE+++++ ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGL 115
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DFG A+H +
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARH--TDDEMXGX 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 263 GAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 421 QV 422
Q
Sbjct: 321 QA 322
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLE 306
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 307 KMLVLDSDKRITAAQAL 323
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 83 FF 84
F
Sbjct: 109 VF 110
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ D G A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDGGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ D G A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDRGLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QV 422
Q
Sbjct: 301 QA 302
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + IYQ+ R L YIH I HRD+KP NL +N E LK+ DF A+H + Y
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFYLARH--TDDEMTGY 182
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ +R+YRAPE++ + Y +D+WS GC++AELL G+ +FPG +DQL I++++GTP
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E +++++ NY + Q+ ++ VF + P A+DL+ ++L RI+
Sbjct: 243 GAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 421 QVRSITPF 428
Q + F
Sbjct: 301 QALAHAYF 308
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKK-------VLQDKRFKNREMQIMRRLEHSNIVKLKY 82
+G+G++G V A +G VA+KK ++ KR RE+++++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 83 FF 84
F
Sbjct: 89 VF 90
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL I++++GTP E +++++ NY + Q+ ++ VF + P A+DL+
Sbjct: 229 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLE 286
Query: 199 RLLEYTPSSRISPLQVF 215
++L RI+ Q
Sbjct: 287 KMLVLDSDKRITAAQAL 303
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 121/228 (53%), Gaps = 15/228 (6%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + F LV+ FM + K+ KH + + +YQ+
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFY-LVMPFMGTDLGKLMKHEKLGEDRI-----QFLVYQML 138
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ L YIH GI HRD+KP NL +N E LK+ DFG A+ + +R+YRAPE
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVN-EDCELKILDFGLARQA--DSEMXGXVVTRWYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I + YT +D+WS GC++AE++ G+ +F G +DQL EI+KV GTP E ++ +
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 375 ----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY + P+++ ++ + P A++L+ ++L R++
Sbjct: 256 DEAKNYMK-GLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVT 301
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV---LQDKRFKN---REMQIMRRLEHSNIVKL 80
+G+G++G V A +G VAIKK+ Q + F RE+++++ + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLIS 198
+DQL EI+KV GTP E ++ + NY + P+++ ++ + P A++L+
Sbjct: 232 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK-GLPELEKKDFASIL-TNASPLAVNLLE 289
Query: 199 RLLEYTPSSRISPLQVFLNLVLEFMPET 226
++L R++ + + E + +T
Sbjct: 290 KMLVLDAEQRVTAGEALAHPYFESLHDT 317
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+VL+ M ++++ S Q + + ++YQL R L Y+H + HRD+KP NLL+
Sbjct: 136 VVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-----VSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
N E LK+ DFG A+ L Y+ +R+YRAPEL+ +YT ID+WS G
Sbjct: 192 N-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPW 389
C+ E+L + +FPG + V QL I+ VLGTP+ I+ + P + PW
Sbjct: 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW 310
Query: 390 SKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
V+ A+ L+ R+L + PS+RIS
Sbjct: 311 ETVY-PGADRQALSLLGRMLRFEPSARIS 338
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 11 AKNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKK------VLQDKRFKNR 64
A+++ D+ + IGNG++G+V A+ +G+ VAIKK V+ + + R
Sbjct: 43 ARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR 102
Query: 65 EMQIMRRLEHSNIVKLK 81
E++I++ +H NI+ +K
Sbjct: 103 ELKILKHFKHDNIIAIK 119
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
V QL I+ VLGTP+ I+ + P + PW V+ A+ L+ R
Sbjct: 269 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGR 327
Query: 200 LLEYTPSSRIS 210
+L + PS+RIS
Sbjct: 328 MLRFEPSARIS 338
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+VL+ M ++++ S Q + + ++YQL R L Y+H + HRD+KP NLL+
Sbjct: 137 VVLDLMESDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 192
Query: 278 NPETGVLKLCDFGSAKHLVRGEPN-----VSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
N E LK+ DFG A+ L Y+ +R+YRAPEL+ +YT ID+WS G
Sbjct: 193 N-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPW 389
C+ E+L + +FPG + V QL I+ VLGTP+ I+ + P + PW
Sbjct: 252 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW 311
Query: 390 SKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
V+ A+ L+ R+L + PS+RIS
Sbjct: 312 ETVY-PGADRQALSLLGRMLRFEPSARIS 339
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 11 AKNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKK------VLQDKRFKNR 64
A+++ D+ + IGNG++G+V A+ +G+ VAIKK V+ + + R
Sbjct: 44 ARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR 103
Query: 65 EMQIMRRLEHSNIVKLK 81
E++I++ +H NI+ +K
Sbjct: 104 ELKILKHFKHDNIIAIK 120
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNPNYTEF---KFPQIKSHPWSKVFRVRTPPDAIDLISR 199
V QL I+ VLGTP+ I+ + P + PW V+ A+ L+ R
Sbjct: 270 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGR 328
Query: 200 LLEYTPSSRIS 210
+L + PS+RIS
Sbjct: 329 MLRFEPSARIS 339
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 41/215 (19%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV---RGEPN 301
+ + +YQL + + Y+H G+ HRD+KP N+LLN E V K+ DFG ++ V R N
Sbjct: 110 HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHV-KVADFGLSRSFVNIRRVTNN 168
Query: 302 V-------------------SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
+ Y+ +R+YRAPE++ G+ YT ID+WS GC+L E+L G+
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSH-------------PW 389
P+FPG S ++QL II V+ P+ E + + + + +K W
Sbjct: 229 PIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKW 288
Query: 390 SKVFRVRTP-----PDAIDLISRLLEYTPSSRISP 419
+ P +A+DL+ +LL++ P+ RIS
Sbjct: 289 KNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQ------DKRFKNREMQIMRRLE-HSNIVKLKY 82
+G G++GIV+++ +GE+VA+KK+ D + RE+ I+ L H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 83 FFYSSGDK 90
+ D+
Sbjct: 77 VLRADNDR 84
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 141 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSH-------------PWSKVFRV 187
S ++QL II V+ P+ E + + + + +K W +
Sbjct: 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 188 RTPP-----DAIDLISRLLEYTPSSRISP 211
P +A+DL+ +LL++ P+ RIS
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISA 323
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 22/213 (10%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L LV EF + + K++ + K +++QL + L + H + HRD+KPQNL
Sbjct: 76 LTLVFEFCDQDL---KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRAPELIFGAIDYTTKIDVWSAG 332
L+N G LKL +FG A+ G P Y + + +YR P+++FGA Y+T ID+WSAG
Sbjct: 133 LIN-RNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 333 CVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPW-- 389
C+ AEL G+P+FPG+ DQL I ++LGTPT EQ M K P K +P
Sbjct: 190 CIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYP 243
Query: 390 --SKVFRVRTPPDAI--DLISRLLEYTPSSRIS 418
+ + V +A DL+ LL+ P RIS
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKLKYF 83
IG G++G V++AK ++ E+VA+K+V D + RE+ +++ L+H NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 84 FYSSGDKK 91
+S DKK
Sbjct: 70 LHS--DKK 75
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPW----SKVFRVRTPPDAI--DLI 197
DQL I ++LGTPT EQ M K P K +P + + V +A DL+
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263
Query: 198 SRLLEYTPSSRIS 210
LL+ P RIS
Sbjct: 264 QNLLKCNPVQRIS 276
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L LV EF + + K++ + K +++QL + L + H + HRD+KPQNL
Sbjct: 76 LTLVFEFCDQDL---KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRAPELIFGAIDYTTKIDVWSAG 332
L+N G LKL DFG A+ G P Y + + +YR P+++FGA Y+T ID+WSAG
Sbjct: 133 LIN-RNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 333 CVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPW-- 389
C+ AEL +P+FPG+ DQL I ++LGTPT EQ M K P K +P
Sbjct: 190 CIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYP 243
Query: 390 --SKVFRVRTPPDAI--DLISRLLEYTPSSRIS 418
+ + V +A DL+ LL+ P RIS
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKLKYF 83
IG G++G V++AK ++ E+VA+K+V D + RE+ +++ L+H NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 84 FYSSGDKK 91
+S DKK
Sbjct: 70 LHS--DKK 75
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPW----SKVFRVRTPPDAI--DLI 197
DQL I ++LGTPT EQ M K P K +P + + V +A DL+
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263
Query: 198 SRLLEYTPSSRIS 210
LL+ P RIS
Sbjct: 264 QNLLKCNPVQRIS 276
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 132/253 (52%), Gaps = 26/253 (10%)
Query: 189 TPPDAIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETV--YKVAKHYSKSKQNF 241
TP AI IS + E + + V L LV EFM + Y ++ + +
Sbjct: 46 TPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL 105
Query: 242 PCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPN 301
K + +QL + LA+ H I HRD+KPQNLL+N + G LKL DFG A+ G P
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN-KRGQLKLGDFGLARAF--GIPV 162
Query: 302 VSY---ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
++ + + +YRAP+++ G+ Y+T ID+WS GC+LAE++ G+P+FPG + +QL I
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
Query: 359 KVLGTPTREQIREMNPNYTEF-KF-PQIKSHPWSKVFRVRTP-------PDAIDLISRLL 409
++GTP + P+ T+ K+ P I+ P + +V P + +D + LL
Sbjct: 223 DIMGTPN----ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL 278
Query: 410 EYTPSSRISPLQV 422
+ P R+S Q
Sbjct: 279 QLNPDMRLSAKQA 291
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKL 80
+GNG++ VY+ +G VA+K+V D RE+ +M+ L+H NIV+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 22/216 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
++ E M +++V S Q + + +IYQ R++ +H + HRD+KP NLL+
Sbjct: 91 IIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVS-----------YICSRYYRAPELIFGAIDYTTKI 326
N LK+CDFG A+ + + S Y+ +R+YRAPE++ + Y+ +
Sbjct: 146 NSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAM 204
Query: 327 DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFP 382
DVWS GC+LAEL L +P+FPG QL+ I ++GTP + +R + +P E+ P
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
Query: 383 QIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+ P K+F R P IDL+ R+L + P+ RI+
Sbjct: 265 MYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 19 DLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQ-DKRF----KNREMQIMRRLE 73
++ + K+++G G++G+V A +GE+VAIKK+ DK RE++I++ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 74 HSNIVKL 80
H NI+ +
Sbjct: 68 HENIITI 74
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 145 QLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFPQIKSHPWSKVFRVRTPPDAIDLISRL 200
QL+ I ++GTP + +R + +P E+ P + P K+F R P IDL+ R+
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRM 289
Query: 201 LEYTPSSRIS 210
L + P+ RI+
Sbjct: 290 LVFDPAKRIT 299
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 22/216 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
++ E M +++V S Q + + +IYQ R++ +H + HRD+KP NLL+
Sbjct: 91 IIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
Query: 278 NPETGVLKLCDFGSAKHLVRG-----EPN------VSYICSRYYRAPELIFGAIDYTTKI 326
N LK+CDFG A+ + EP V ++ +R+YRAPE++ + Y+ +
Sbjct: 146 NSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM 204
Query: 327 DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFP 382
DVWS GC+LAEL L +P+FPG QL+ I ++GTP + +R + +P E+ P
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
Query: 383 QIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+ P K+F R P IDL+ R+L + P+ RI+
Sbjct: 265 MYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 19 DLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQ-DKRF----KNREMQIMRRLE 73
++ + K+++G G++G+V A +GE+VAIKK+ DK RE++I++ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 74 HSNIVKL 80
H NI+ +
Sbjct: 68 HENIITI 74
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 145 QLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFPQIKSHPWSKVFRVRTPPDAIDLISRL 200
QL+ I ++GTP + +R + +P E+ P + P K+F R P IDL+ R+
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP-RVNPKGIDLLQRM 289
Query: 201 LEYTPSSRIS 210
L + P+ RI+
Sbjct: 290 LVFDPAKRIT 299
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
++ E M +++V S Q + + +IYQ R++ +H + HRD+KP NLL+
Sbjct: 91 IIQELMQTDLHRVI-----STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI 145
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVS-----------YICSRYYRAPELIFGAIDYTTKI 326
N LK+CDFG A+ + + S + +R+YRAPE++ + Y+ +
Sbjct: 146 NSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAM 204
Query: 327 DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFP 382
DVWS GC+LAEL L +P+FPG QL+ I ++GTP + +R + +P E+ P
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
Query: 383 QIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+ P K+F R P IDL+ R+L + P+ RI+
Sbjct: 265 MYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRIT 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 19 DLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQ-DKRF----KNREMQIMRRLE 73
++ + K+++G G++G+V A +GE+VAIKK+ DK RE++I++ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 74 HSNIVKL 80
H NI+ +
Sbjct: 68 HENIITI 74
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 145 QLVEIIKVLGTPTREQ-IREM-NPNYTEF--KFPQIKSHPWSKVFRVRTPPDAIDLISRL 200
QL+ I ++GTP + +R + +P E+ P + P K+F R P IDL+ R+
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRM 289
Query: 201 LEYTPSSRIS 210
L + P+ RI+
Sbjct: 290 LVFDPAKRIT 299
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 125 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 175
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 176 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 235
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 236 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNAYLNKYRIELDPQLEALVG 289
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 290 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 345
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 255 DQLVKIAKVLGTDG------LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 308
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 309 SPEAIDFLDKLLRYDHQERLTALEAM 334
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 105 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 155
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 215
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 216 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 269
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 270 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 325
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 235 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 288
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 289 SPEAIDFLDKLLRYDHQERLTALEAM 314
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 105 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 155
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 156 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 215
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 216 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 269
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 270 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 325
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 235 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 288
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 289 SPEAIDFLDKLLRYDHQERLTALEAM 314
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 106 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 156
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 157 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 216
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 217 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 270
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 271 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 326
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 236 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 289
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 290 SPEAIDFLDKLLRYDHQERLTALEAM 315
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 34/237 (14%)
Query: 217 NLVLEFMPETVYKVAKHYSKSKQNFPC---FYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L+ E++ T +KV +P + + YIY+L ++L Y H GI HRD+KP
Sbjct: 104 SLIFEYVNNTDFKVL---------YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH 154
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N++++ E L+L D+G A+ G+ + SRY++ PEL+ DY +D+WS GC
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGC 214
Query: 334 VLAELLL-GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS--- 386
+ A ++ +P F G DQLV+I KVLGT +N +++ PQ+++
Sbjct: 215 MFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVG 268
Query: 387 ----HPWSKVFRVRT----PPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRAV 435
PW K P+AID + +LL Y R++ L+ + P+ ++RA
Sbjct: 269 RHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT-HPYFQQVRAA 324
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 144 DQLVEIIKVLGTPTREQIREMNPNYTEFKF---PQIKS-------HPWSKVFRVRT---- 189
DQLV+I KVLGT +N +++ PQ+++ PW K
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 190 PPDAIDLISRLLEYTPSSRISPLQVF 215
P+AID + +LL Y R++ L+
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAM 313
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V H + +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVI-HMELDHERMSYL-----LYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 196 VILG-MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 375 ---NYTEF--KFPQIKSHP----W-----SKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E K+P IK W S+ +++T A DL+S++L P RIS
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKT-SQARDLLSKMLVIDPDKRIS 311
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEF--KFPQIKSHP----W-----SKVFRVR 188
+DQ ++I+ LGTP+ E + + P NY E K+P IK W S+ +++
Sbjct: 231 IDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIK 290
Query: 189 TPPDAIDLISRLLEYTPSSRIS 210
T A DL+S++L P RIS
Sbjct: 291 T-SQARDLLSKMLVIDPDKRIS 311
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + ++Y + L +H G+ HRD+ P N+LL + + +CDF A+ Y
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHY 193
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ R+YRAPEL+ +T +D+WSAGCV+AE+ + +F G + +QL +I++V+GTP
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E + + +Y + + W+ V P A+DLI+++LE+ P RIS
Sbjct: 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV-ALDLIAKMLEFNPQRRISTE 312
Query: 421 QV 422
Q
Sbjct: 313 QA 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 144 DQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+QL +I++V+GTP E + + +Y + + W+ V P A+DLI++
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV-ALDLIAK 299
Query: 200 LLEYTPSSRISPLQVF 215
+LE+ P RIS Q
Sbjct: 300 MLEFNPQRRISTEQAL 315
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + ++Y + L +H G+ HRD+ P N+LL + + +CDF A+ Y
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHY 193
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
+ R+YRAPEL+ +T +D+WSAGCV+AE+ + +F G + +QL +I++V+GTP
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253
Query: 365 TREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E + + +Y + + W+ V P A+DLI+++LE+ P RIS
Sbjct: 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV-ALDLIAKMLEFNPQRRISTE 312
Query: 421 QV 422
Q
Sbjct: 313 QA 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 144 DQLVEIIKVLGTPTREQIREMNP----NYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
+QL +I++V+GTP E + + +Y + + W+ V P A+DLI++
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV-ALDLIAK 299
Query: 200 LLEYTPSSRISPLQVF 215
+LE+ P RIS Q
Sbjct: 300 MLEFNPQRRISTEQAL 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 17/183 (9%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+YQ+ + ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RY
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQI 369
YRAPE+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP+ E +
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 370 REMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSS 415
+++ P Y E + P+ + + K+F V P D A DL+S++L S
Sbjct: 250 KKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 17/183 (9%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+YQ+ + ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RY
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQI 369
YRAPE+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP+ E +
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 370 REMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSS 415
+++ P Y E + P+ + + K+F V P D A DL+S++L S
Sbjct: 250 KKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 17/183 (9%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+YQ+ + ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RY
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQI 369
YRAPE+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP+ E +
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 370 REMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSS 415
+++ P Y E + P+ + + K+F V P D A DL+S++L S
Sbjct: 250 KKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLSQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP+ E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP+ E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 19/254 (7%)
Query: 193 AIDLISRLLEYTPSSRISPLQVF-----LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTK 247
A+ I L + + ++ L+VF L+LV E+ TV Y + P K
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVK 105
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY--- 304
+Q +++ + H HRD+KP+N+L+ + V+KLCDFG A+ L+ G P+ Y
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHS-VIKLCDFGFAR-LLTG-PSDYYDDE 162
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG-- 362
+ +R+YR+PEL+ G Y +DVW+ GCV AELL G P++PG S VDQL I K LG
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 363 TPTREQIREMNPNYTEFKFPQIKS-HPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
P +Q+ N ++ K P + P F + P A+ L+ L P+ R++ Q
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYP-ALGLLKGCLHMDPTERLTCEQ 281
Query: 422 VRSITPFLIELRAV 435
+ P+ +R +
Sbjct: 282 LLH-HPYFENIREI 294
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQD------KRFKNREMQIMRRLEHSNIVKLKYF 83
IG GS+G+V++ + D+G++VAIKK L+ K+ RE++++++L+H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 84 F 84
F
Sbjct: 71 F 71
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 86 NIIGLLNVFTPQKSLEEFQ-DVYIVMELMDANLCQVIQMELDHER------MSYLLYQML 138
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ V ++ +RYYRAPE
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPE 197
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 198 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 256
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 257 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 313
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 233 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 291
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 292 KASQARDLLSKMLVIDASKRIS 313
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 291 ASQAR------DLLSKMLVIDPAKRIS 311
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 30 IGNGSFGIVYQA--KLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVK 79
IG+G+ GIV A +LD VAIKK+ + F+N RE+ +M+ + H NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 80 LKYFF 84
L F
Sbjct: 88 LLNVF 92
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 16/212 (7%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L+L+ E+ + K Y + K ++YQL + + H HRD+KPQNL
Sbjct: 108 LHLIFEYAENDL----KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163
Query: 276 LLN----PETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRAPELIFGAIDYTTKIDV 328
LL+ ET VLK+ DFG A+ G P + I + +YR PE++ G+ Y+T +D+
Sbjct: 164 LLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDI 221
Query: 329 WSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQIKS 386
WS C+ AE+L+ P+FPGDS +DQL +I +VLG P + P++ + FP+ +
Sbjct: 222 WSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ-SFPKFRG 280
Query: 387 HPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+V + +DL++ +LE P RIS
Sbjct: 281 KTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS 312
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMRRLEHSNIVKLK 81
T +G G++G VY+A + E VAIK++ + + RE+ +++ L+H NI++LK
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 82 YFFY 85
+
Sbjct: 100 SVIH 103
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 85 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 197 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 256 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 232 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 290
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 291 KASQARDLLSKMLVIDASKRIS 312
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 77 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLXQVIQMELDHER------MSYLLYQML 129
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 189 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 283
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 284 ASQARDLLSKMLVIDPAKRIS 304
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 291 ASQAR------DLLSKMLVIDPAKRIS 311
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + +Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLXQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 291 ASQARDLLSKMLVIDPAKRIS 311
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 30 IGNGSFGIVYQA--KLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVK 79
IG+G+ GIV A +LD VAIKK+ + F+N RE+ +M+ + H NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 80 LKYFF 84
L F
Sbjct: 88 LLNVF 92
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V H + +YQ+
Sbjct: 82 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVI-HMELDHERMSYL-----LYQML 134
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPE 193
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 194 VILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 375 ---NYTEFK-----------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E + FP S+ +++T A DL+S++L P RIS
Sbjct: 253 TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKT-SQARDLLSKMLVIDPDKRIS 309
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK-----------FPQIKSHPWSKVFRVR 188
+DQ ++I+ LGTP+ E + + P NY E + FP S+ +++
Sbjct: 229 IDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIK 288
Query: 189 TPPDAIDLISRLLEYTPSSRIS 210
T A DL+S++L P RIS
Sbjct: 289 T-SQARDLLSKMLVIDPDKRIS 309
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 122 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 174
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 234 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 346
Query: 416 RIS 418
RIS
Sbjct: 347 RIS 349
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 269 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 329 ASQAR------DLLSKMLVIDPAKRIS 349
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 291 ASQARDLLSKMLVIDPAKRIS 311
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 14/65 (21%)
Query: 30 IGNGSFGIVYQA--KLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVK 79
IG+G+ GIV A +LD VAIKK+ + F+N RE+ +M+ + H NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 80 LKYFF 84
L F
Sbjct: 88 LLNVF 92
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 122 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 174
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 234 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 346
Query: 416 RIS 418
RIS
Sbjct: 347 RIS 349
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 269 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 329 ASQAR------DLLSKMLVIDPAKRIS 349
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 85 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 197 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 309
Query: 416 RIS 418
RIS
Sbjct: 310 RIS 312
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 232 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 291
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 292 ASQAR------DLLSKMLVIDPAKRIS 312
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 85 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 137
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 197 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 232 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 291
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 292 ASQARDLLSKMLVIDPAKRIS 312
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 291 ASQARDLLSKMLVIDPAKRIS 311
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 83 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 135
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 194
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 195 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 253
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 254 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 310
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 230 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 289
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 290 ASQARDLLSKMLVIDPAKRIS 310
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 34/243 (13%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFK----------------FPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
NY E + FP H K + R DL+S++L P+
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR------DLLSKMLVIDPAK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 25/87 (28%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFK----------------FPQIKSHPWSK 183
+DQ ++I+ LGTP E ++++ P NY E + FP H K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 184 VFRVRTPPDAIDLISRLLEYTPSSRIS 210
+ R DL+S++L P+ RIS
Sbjct: 291 ASQAR------DLLSKMLVIDPAKRIS 311
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 17/183 (9%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+YQ+ + ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RY
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQI 369
YRAPE+I G + Y +D+WS G ++ E++ G +FPG +DQ ++I+ LGTP+ E +
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 370 REMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSS 415
+++ P Y E + P+ + + K+F V P D A DL+S++L S
Sbjct: 250 KKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 77 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 129
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 189 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 283
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 284 ASQARDLLSKMLVIDPAKRIS 304
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 78 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 190 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 225 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 284
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 285 ASQARDLLSKMLVIDPAKRIS 305
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++IS L +TP + Q + LV+E M + +V + ++ +YQ+
Sbjct: 78 NIISLLNVFTPQKTLEEFQD-VYLVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 190 VILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 375 ---NYTE-------FKFPQI---KSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
NY E FP++ P A DL+S++L P+ RIS
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTE-------FKFPQI---KSHPWSKVFRVRT 189
+DQ ++I+ LGTP E ++++ P NY E FP++ P
Sbjct: 225 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 284
Query: 190 PPDAIDLISRLLEYTPSSRIS 210
A DL+S++L P+ RIS
Sbjct: 285 ASQARDLLSKMLVIDPAKRIS 305
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+L+
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 17/183 (9%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+YQ+ + ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RY
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSD-ATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQI 369
YRAPE+I G + Y +D+WS G ++ E++ G +FPG +DQ ++I+ LGTP+ E +
Sbjct: 191 YRAPEVILG-MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 370 REMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSS 415
+++ P Y E + P+ + + K+F V P D A DL+S++L S
Sbjct: 250 KKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 416 RIS 418
RIS
Sbjct: 309 RIS 311
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP+ E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREA 318
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREA 318
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRIS 418
+ P+A+D + +LL Y SR++
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREA 318
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREA 318
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 110 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 223
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 224 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 281
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 296
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 297 LDFLDKLLRYDHQSRLTAREA 317
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 109 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 222
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 223 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 280
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 238 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 295
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 296 LDFLDKLLRYDHQSRLTAREA 316
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 110 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 223
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 224 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 281
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 296
Query: 194 IDLISRLLEYTPSSRISPLQV 214
+D + +LL Y SR++ +
Sbjct: 297 LDFLDKLLRYDHQSRLTAREA 317
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRIS 418
+ P+A+D + +LL Y SR++
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRIS 210
+D + +LL Y SR++
Sbjct: 298 LDFLDKLLRYDHQSRLT 314
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 116 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 170 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 229
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 230 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 287
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRISPLQV 422
+ P+A+D + +LL Y SR++ +
Sbjct: 288 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 323
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 245 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 302
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 303 LDFLDKLLRYDHQSRLTAREAM 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E++ T +K + Q F + Y+Y+L ++L Y H GI HRD+KP N+++
Sbjct: 112 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ + L+L D+G A+ + + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 166 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTPT-----REQIREMNPNYTEFKFPQIKSHPWSK 391
++ +P F G DQLV I KVLGT ++ +++P++ + Q W
Sbjct: 226 MIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI-LGQHSRKRWEN 284
Query: 392 VF----RVRTPPDAIDLISRLLEYTPSSRIS 418
R P+A+DL+ +LL Y R++
Sbjct: 285 FIHSENRHLVSPEALDLLDKLLRYDHQQRLT 315
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 144 DQLVEIIKVLGTPT-----REQIREMNPNYTEFKFPQIKSHPWSKVF----RVRTPPDAI 194
DQLV I KVLGT ++ +++P++ + Q W R P+A+
Sbjct: 241 DQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEAL 299
Query: 195 DLISRLLEYTPSSRIS 210
DL+ +LL Y R++
Sbjct: 300 DLLDKLLRYDHQQRLT 315
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E++ T +K + Q F + Y+Y+L ++L Y H GI HRD+KP N+++
Sbjct: 117 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ + L+L D+G A+ + + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 171 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 230
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTPT-----REQIREMNPNYTEFKFPQIKSHPWSK 391
++ +P F G DQLV I KVLGT ++ +++P++ + Q W
Sbjct: 231 MIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI-LGQHSRKRWEN 289
Query: 392 VF----RVRTPPDAIDLISRLLEYTPSSRIS 418
R P+A+DL+ +LL Y R++
Sbjct: 290 FIHSENRHLVSPEALDLLDKLLRYDHQQRLT 320
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 144 DQLVEIIKVLGTPT-----REQIREMNPNYTEFKFPQIKSHPWSKVF----RVRTPPDAI 194
DQLV I KVLGT ++ +++P++ + Q W R P+A+
Sbjct: 246 DQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEAL 304
Query: 195 DLISRLLEYTPSSRIS 210
DL+ +LL Y R++
Sbjct: 305 DLLDKLLRYDHQQRLT 320
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
LV E + T +K + Q + + Y+Y++ ++L Y H +GI HRD+KP N+++
Sbjct: 111 LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAE 337
+ E L+L D+G A+ G+ + SRY++ PEL+ Y +D+WS GC+LA
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 224
Query: 338 LLL-GQPMFPGDSGVDQLVEIIKVLGTP------TREQIREMNPNYTEFKFPQIKSHPWS 390
++ +P F G DQLV I KVLGT + I E++P + + + W
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWE 282
Query: 391 KVFRVRT----PPDAIDLISRLLEYTPSSRIS 418
+ P+A+D + +LL Y SR++
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 144 DQLVEIIKVLGTPT------REQIREMNPNYTEFKFPQIKSHPWSKVFRVRT----PPDA 193
DQLV I KVLGT + I E++P + + + W + P+A
Sbjct: 240 DQLVRIAKVLGTEDLYDYIDKYNI-ELDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEA 297
Query: 194 IDLISRLLEYTPSSRISPLQVF 215
+D + +LL Y SR++ +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAM 319
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 108/190 (56%), Gaps = 15/190 (7%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ +L++YQL R L YIH + HRD+KP NL +N E VLK+ DFG A+ + +P+ S+
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSH 177
Query: 305 -------ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL--- 354
+ +++YR+P L+ +YT ID+W+AGC+ AE+L G+ +F G ++Q+
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
+E I V+ R+++ + P Y + P +++ +A+D + ++L ++P
Sbjct: 238 LESIPVVHEEDRQELLSVIPVYIRNDMTE-PHKPLTQLLP-GISREAVDFLEQILTFSPM 295
Query: 415 SRISPLQVRS 424
R++ + S
Sbjct: 296 DRLTAEEALS 305
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVL----QDKRFKNREMQIMRRLEHSNIVKLKYFFY 85
+G G G+V+ A D + VAIKK++ Q + RE++I+RRL+H NIVK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 86 SSGDK 90
SG +
Sbjct: 79 PSGSQ 83
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ + +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ G +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRIS 311
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNAL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 78 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 130
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 190 VILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 249 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 305
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 225 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 283
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 284 KASQARDLLSKMLVIDASKRIS 305
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 89 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 141
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ Y+ +RYYRAPE
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 200
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 201 VILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 259
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 260 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 316
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 236 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 294
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 295 KASQARDLLSKMLVIDASKRIS 316
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ + +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP ++++ P
Sbjct: 196 VILG-MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
NY E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP ++++ P NY E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 242 PCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPN 301
P K ++QL R L ++H + HRD+KPQN+L+ +G +KL DFG A+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMAL 176
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S + + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G S VDQL +I+ V+
Sbjct: 177 TSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI--DLISRLLEYTPSSRISP 419
G P E P S + + T D + DL+ + L + P+ RIS
Sbjct: 236 GLPGEEDW----PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Query: 420 LQVRSITPFLIELRAVFENICFGVP 444
S P+ +L EN+ +P
Sbjct: 292 YSALS-HPYFQDLERCKENLDSHLP 315
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 195 DLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLF 254
++I L +TP + Q + +V+E M + +V + ++ +YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQMELDHER------MSYLLYQML 136
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
+ ++H GI HRD+KP N+++ + LK+ DFG A+ + +RYYRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 315 LIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNP 374
+I G + Y +D+WS GC++ E++ + +FPG +DQ ++I+ LGTP E ++++ P
Sbjct: 196 VILG-MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 375 ---NYTEFKFPQIKSHPWSKVF-RVRTPPD----------AIDLISRLLEYTPSSRIS 418
Y E + P+ + + K+F V P D A DL+S++L S RIS
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 143 VDQLVEIIKVLGTPTREQIREMNP---NYTEFKFPQIKSHPWSKVF-RVRTPPD------ 192
+DQ ++I+ LGTP E ++++ P Y E + P+ + + K+F V P D
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKL 289
Query: 193 ----AIDLISRLLEYTPSSRIS 210
A DL+S++L S RIS
Sbjct: 290 KASQARDLLSKMLVIDASKRIS 311
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 242 PCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPN 301
P K ++QL R L ++H + HRD+KPQN+L+ +G +KL DFG A+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMAL 176
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S + + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G S VDQL +I+ V+
Sbjct: 177 TSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI--DLISRLLEYTPSSRIS 418
G P E P S + + T D + DL+ + L + P+ RIS
Sbjct: 236 GLPGEEDW----PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 242 PCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPN 301
P K ++QL R L ++H + HRD+KPQN+L+ +G +KL DFG A+
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMAL 176
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S + + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G S VDQL +I+ V+
Sbjct: 177 TSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI--DLISRLLEYTPSSRIS 418
G P E P S + + T D + DL+ + L + P+ RIS
Sbjct: 236 GLPGEEDW----PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 67/253 (26%)
Query: 242 PCFYTKLYI----YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-- 295
P F T+ +I Y L +IH GI HRD+KP N LLN + V K+CDFG A+ +
Sbjct: 123 PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSV-KVCDFGLARTINS 181
Query: 296 -----------VRGEPN----------VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCV 334
EP S++ +R+YRAPELI +YT ID+WS GC+
Sbjct: 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI 241
Query: 335 LAELL-LGQ----------PMFPGD-----------------SGVDQLVEIIKVLGTPTR 366
AELL + Q P+FPG S DQL I ++GTPT
Sbjct: 242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTE 301
Query: 367 EQIREMN-PNYTEFKFPQIKSHPWSKVFRVR-----TPPDAIDLISRLLEYTPSSRISPL 420
+ ++ +N P ++ IK P K ++ D I+L+ +L++ P+ RI+
Sbjct: 302 DDLKNINKPEVIKY----IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITID 357
Query: 421 QVRSITPFLIELR 433
Q P+L ++R
Sbjct: 358 QALD-HPYLKDVR 369
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKL 80
K +IG GS+G VY A ++ + VAIKKV L D + RE+ I+ RL+ I++L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 141 SGVDQLVEIIKVLGTPTREQIREMN-PNYTEFKFPQIKSHPWSKVFRVR-----TPPDAI 194
S DQL I ++GTPT + ++ +N P ++ IK P K ++ D I
Sbjct: 284 SNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY----IKLFPHRKPINLKQKYPSISDDGI 339
Query: 195 DLISRLLEYTPSSRISPLQVF 215
+L+ +L++ P+ RI+ Q
Sbjct: 340 NLLESMLKFNPNKRITIDQAL 360
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 115/259 (44%), Gaps = 71/259 (27%)
Query: 242 PCFYTKLYI----YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR 297
P + T+L+I Y L + Y+H GI HRD+KP N L+N + V K+CDFG A+ +
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSV-KVCDFGLARTVDY 208
Query: 298 GEPNVS----------------------------YICSRYYRAPELIFGAIDYTTKIDVW 329
E S ++ +R+YRAPELI +YT IDVW
Sbjct: 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW 268
Query: 330 SAGCVLAELLL-----------GQPMFPGDS--------------------GVDQLVEII 358
S GC+ AELL P+FPG S DQL I
Sbjct: 269 SIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIF 328
Query: 359 KVLGTPTREQI----REMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
+LGTP+ E I +E Y FP+ + ++ F + DAI L+ R+L + P+
Sbjct: 329 NILGTPSEEDIEALEKEDAKRYIRI-FPKREGTDLAERFPA-SSADAIHLLKRMLVFNPN 386
Query: 415 SRISPLQVRSITPFLIELR 433
RI+ + + PF E+R
Sbjct: 387 KRITINECLA-HPFFKEVR 404
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQ------DKRFKNREMQIMRRLEHSNIVKL 80
+ +IG GS+G V +A +VAIKK+L+ D + RE+ I+ RL H ++VK+
Sbjct: 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 144 DQLVEIIKVLGTPTREQI----REMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 199
DQL I +LGTP+ E I +E Y FP+ + ++ F + DAI L+ R
Sbjct: 322 DQLNVIFNILGTPSEEDIEALEKEDAKRYIRI-FPKREGTDLAERFPA-SSADAIHLLKR 379
Query: 200 LLEYTPSSRIS 210
+L + P+ RI+
Sbjct: 380 MLVFNPNKRIT 390
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 44/275 (16%)
Query: 197 ISRLLEYTPSSRISPLQVFLN-------LVLEFMPETVYKVAKHYSKSKQN-----FPCF 244
I+ L E + IS +VFL+ L+ ++ ++ + K + SK N P
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSA-------KH 294
K +YQ+ + Y+H + HRD+KP N+L+ PE G +K+ D G A K
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS----- 349
L +P + + +YRAPEL+ GA YT ID+W+ GC+ AELL +P+F
Sbjct: 189 LADLDP---VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 245
Query: 350 ----GVDQLVEIIKVLGTPTR---EQIREMNPNYTEFK------FPQIKSHPWSKVFRVR 396
DQL I V+G P E I++M + T K + + + +V+
Sbjct: 246 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK 305
Query: 397 TPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIE 431
A L+ +LL P RI+ Q P+ +E
Sbjct: 306 PDSKAFHLLQKLLTMDPIKRITSEQAMQ-DPYFLE 339
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 64 REMQIMRRLEHSNIVKLKYFFYSSGDKK 91
RE+ ++R L+H N++ L+ F S D+K
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK 94
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 45/270 (16%)
Query: 185 FRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSK-QNFPC 243
R + + +++I L +T + I + E + +Y++ K K+K Q F
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHIC-------MTFELLSMNLYELIK---KNKFQGFSL 199
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET-GVLKLCDFGSAKHLVRGEPNV 302
+ + + + + L +H I H D+KP+N+LL + +K+ DFGS+ +
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVY 257
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
+ I SR+YRAPE+I GA Y ID+WS GC+LAELL G P+ PG+ DQL +I++LG
Sbjct: 258 TXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 363 TPTREQI--REMNPNYTEFK-FPQI---------------------------KSHPWSKV 392
P+++ + + N+ K +P+ +S W
Sbjct: 317 MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA 376
Query: 393 FRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ P +D + + LE+ P+ R++P Q
Sbjct: 377 LKGCDDPLFLDFLKQCLEWDPAVRMTPGQA 406
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEH 74
VIG GSFG V +A + VA+K V +KRF + + +R LEH
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH 149
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 51/273 (18%)
Query: 185 FRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSK-QNFPC 243
R + + +++I L +T + I + E + +Y++ K K+K Q F
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHIC-------MTFELLSMNLYELIK---KNKFQGFSL 199
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET-GVLKLCDFGSAKHLVRGEPNV 302
+ + + + + L +H I H D+KP+N+LL + +K+ DFGS+ +
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVY 257
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
+ I SR+YRAPE+I GA Y ID+WS GC+LAELL G P+ PG+ DQL +I++LG
Sbjct: 258 TXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHP------------------WSKVFRVRTPPDA--- 401
P++ + ++ + F K +P S+ ++R PP++
Sbjct: 317 MPSQ---KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW 373
Query: 402 ------------IDLISRLLEYTPSSRISPLQV 422
+D + + LE+ P+ R++P Q
Sbjct: 374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQA 406
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEH 74
VIG GSFG V +A + VA+K V +KRF + + +R LEH
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH 149
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 47/244 (19%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV--LGICHRDIKPQ 273
L LV E + +Y + + + + + T+ + Q+ +L ++ L I H D+KP+
Sbjct: 131 LCLVFEMLSYNLYDLLR--NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPE 188
Query: 274 NLLL-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
N+LL NP+ +K+ DFGS+ L G+ I SR+YR+PE++ G + Y ID+WS G
Sbjct: 189 NILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG-MPYDLAIDMWSLG 245
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWS-- 390
C+L E+ G+P+F G + VDQ+ +I++VLG P I + P +F F ++ W+
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AHILDQAPKARKF-FEKLPDGTWNLK 303
Query: 391 ---------------KVFRV-----------------RTPPDAI---DLISRLLEYTPSS 415
K+ + T D + DLI R+L+Y P +
Sbjct: 304 KTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 363
Query: 416 RISP 419
RI P
Sbjct: 364 RIQP 367
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNI--VKLKYF 83
++IG GSFG V +A E VAIK + K F N+ +R LE N ++KY+
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 117
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 47/244 (19%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV--LGICHRDIKPQ 273
L LV E + +Y + + + + + T+ + Q+ +L ++ L I H D+KP+
Sbjct: 112 LCLVFEMLSYNLYDLLR--NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPE 169
Query: 274 NLLL-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
N+LL NP+ +K+ DFGS+ L G+ I SR+YR+PE++ G + Y ID+WS G
Sbjct: 170 NILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG-MPYDLAIDMWSLG 226
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWS-- 390
C+L E+ G+P+F G + VDQ+ +I++VLG P I + P +F F ++ W+
Sbjct: 227 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AHILDQAPKARKF-FEKLPDGTWNLK 284
Query: 391 ---------------KVFRV-----------------RTPPDAI---DLISRLLEYTPSS 415
K+ + T D + DLI R+L+Y P +
Sbjct: 285 KTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 344
Query: 416 RISP 419
RI P
Sbjct: 345 RIQP 348
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNI--VKLKYF 83
++IG GSFG V +A E VAIK + K F N+ +R LE N ++KY+
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 98
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 47/244 (19%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV--LGICHRDIKPQ 273
L LV E + +Y + + + + + T+ + Q+ +L ++ L I H D+KP+
Sbjct: 131 LCLVFEMLSYNLYDLLR--NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPE 188
Query: 274 NLLL-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
N+LL NP+ +K+ DFGS+ L G+ I SR+YR+PE++ G + Y ID+WS G
Sbjct: 189 NILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG-MPYDLAIDMWSLG 245
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWS-- 390
C+L E+ G+P+F G + VDQ+ +I++VLG P I + P +F F ++ W+
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AHILDQAPKARKF-FEKLPDGTWNLK 303
Query: 391 ---------------KVFRV-----------------RTPPDAI---DLISRLLEYTPSS 415
K+ + T D + DLI R+L+Y P +
Sbjct: 304 KTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 363
Query: 416 RISP 419
RI P
Sbjct: 364 RIQP 367
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNI--VKLKYF 83
++IG GSFG V +A E VAIK + K F N+ +R LE N ++KY+
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 117
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 51/273 (18%)
Query: 185 FRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSK-QNFPC 243
R + + +++I L +T + I + E + +Y++ K K+K Q F
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHIC-------MTFELLSMNLYELIK---KNKFQGFSL 199
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET-GVLKLCDFGSAKHLVRGEPNV 302
+ + + + + L +H I H D+KP+N+LL + +K+ DFGS+ +
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVY 257
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
I SR+YRAPE+I GA Y ID+WS GC+LAELL G P+ PG+ DQL +I++LG
Sbjct: 258 XXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG 316
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHP------------------WSKVFRVRTPPDA--- 401
P + + ++ + F K +P S+ ++R PP++
Sbjct: 317 MPXQ---KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW 373
Query: 402 ------------IDLISRLLEYTPSSRISPLQV 422
+D + + LE+ P+ R++P Q
Sbjct: 374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQA 406
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEH 74
VIG G FG V +A + VA+K V +KRF + + +R LEH
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH 149
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 108/247 (43%), Gaps = 62/247 (25%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--------HLV 296
+ K +Y L +IH GI HRD+KP N LLN + V K+CDFG A+ H+V
Sbjct: 132 HVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSV-KICDFGLARTINSDKDIHIV 190
Query: 297 R-----------GEPN-------VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAEL 338
G N S++ +R+YRAPELI +YT ID+WS GC+ AEL
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Query: 339 LLGQ-----------PMFPGD-----------------SGVDQLVEIIKVLGTPTREQIR 370
L P+FPG S DQL I V+GTP E ++
Sbjct: 251 LNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLK 310
Query: 371 EMNPN----YTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSIT 426
+ Y + FP SK + + IDL+ +L + RI+ + S
Sbjct: 311 CITKQEVIKYIKL-FPTRDGIDLSKKYS-SISKEGIDLLESMLRFNAQKRITIDKALS-H 367
Query: 427 PFLIELR 433
P+L ++R
Sbjct: 368 PYLKDVR 374
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKL 80
K +IG GS+G VY A ++ + VAIKKV L D + RE+ I+ RL+ I++L
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 92
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV---RGEPN-- 301
K + L L YIH I HRD+K N+L+ + GVLKL DFG A+ +PN
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + + +YR PEL+ G DY ID+W AGC++AE+ P+ G++ QL I ++
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 246
Query: 362 GTPTREQIREMNPNYTEF-KFPQIKSHPWSKVFRVRT---PPDAIDLISRLLEYTPSSRI 417
G+ T E ++ NY + K +K R++ P A+DLI +LL P+ RI
Sbjct: 247 GSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 418 S 418
Sbjct: 306 D 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 9 GFAKNYTY----FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN- 63
G AK Y F D + + IG G+FG V++A+ +G+ VA+KKVL + +
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 64 -----REMQIMRRLEHSNIVKL 80
RE++I++ L+H N+V L
Sbjct: 61 PITALREIKILQLLKHENVVNL 82
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV---RGEPN-- 301
K + L L YIH I HRD+K N+L+ + GVLKL DFG A+ +PN
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRY 185
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + + +YR PEL+ G DY ID+W AGC++AE+ P+ G++ QL I ++
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 245
Query: 362 GTPTREQIREMNPNYTEF-KFPQIKSHPWSKVFRVRT---PPDAIDLISRLLEYTPSSRI 417
G+ T E ++ NY + K +K R++ P A+DLI +LL P+ RI
Sbjct: 246 GSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 418 S 418
Sbjct: 305 D 305
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 17 FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN------REMQIMR 70
F D + + IG G+FG V++A+ +G+ VA+KKVL + + RE++I++
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ 71
Query: 71 RLEHSNIVKL 80
L+H N+V L
Sbjct: 72 LLKHENVVNL 81
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV---RGEPN-- 301
K + L L YIH I HRD+K N+L+ + GVLKL DFG A+ +PN
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + + +YR PEL+ G DY ID+W AGC++AE+ P+ G++ QL I ++
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 246
Query: 362 GTPTREQIREMNPNYTEF-KFPQIKSHPWSKVFRVRT---PPDAIDLISRLLEYTPSSRI 417
G+ T E ++ NY + K +K R++ P A+DLI +LL P+ RI
Sbjct: 247 GSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 418 S 418
Sbjct: 306 D 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 9 GFAKNYTY----FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN- 63
G AK Y F D + + IG G+FG V++A+ +G+ VA+KKVL + +
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 64 -----REMQIMRRLEHSNIVKL 80
RE++I++ L+H N+V L
Sbjct: 61 PITALREIKILQLLKHENVVNL 82
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV---RGEPN-- 301
K + L L YIH I HRD+K N+L+ + GVLKL DFG A+ +PN
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRY 186
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ + + +YR PEL+ G DY ID+W AGC++AE+ P+ G++ QL I ++
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 246
Query: 362 GTPTREQIREMNPNYTEF-KFPQIKSHPWSKVFRVRT---PPDAIDLISRLLEYTPSSRI 417
G+ T E ++ NY + K +K R++ P A+DLI +LL P+ RI
Sbjct: 247 GSITPEVWPNVD-NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 418 S 418
Sbjct: 306 D 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 9 GFAKNYTY----FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN- 63
G AK Y F D + + IG G+FG V++A+ +G+ VA+KKVL + +
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 64 -----REMQIMRRLEHSNIVKL 80
RE++I++ L+H N+V L
Sbjct: 61 PITALREIKILQLLKHENVVNL 82
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 240 NFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE 299
P K + Q R L ++H I HRD+KP+N+L+ G +KL DFG A+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQM 166
Query: 300 PNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G+S DQL +I
Sbjct: 167 ALAPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 360 VLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISP 419
++G P E + + FP P V A L+ +L + P RIS
Sbjct: 226 LIGLPP-EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA-QLLLEMLTFNPHKRISA 283
Query: 420 LQV 422
+
Sbjct: 284 FRA 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 17/64 (26%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN----------REMQIMRRL---EHSN 76
IG G++G VY+A+ SG VA+K V R N RE+ ++RRL EH N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 77 IVKL 80
+V+L
Sbjct: 68 VVRL 71
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 240 NFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE 299
P K + Q R L ++H I HRD+KP+N+L+ G +KL DFG A+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQM 174
Query: 300 PNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G+S DQL +I
Sbjct: 175 ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233
Query: 360 VLGTP 364
++G P
Sbjct: 234 LIGLP 238
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 20/67 (29%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------------REMQIMRRL---E 73
IG G++G VY+A+ SG VA+K V R N RE+ ++RRL E
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 74 HSNIVKL 80
H N+V+L
Sbjct: 73 HPNVVRL 79
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 240 NFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE 299
P K + Q R L ++H I HRD+KP+N+L+ G +KL DFG A+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQM 166
Query: 300 PNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + +YRAPE++ + Y T +D+WS GC+ AE+ +P+F G+S DQL +I
Sbjct: 167 ALFPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
Query: 360 VLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISP 419
++G P E + + FP P V A L+ +L + P RIS
Sbjct: 226 LIGLPP-EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA-QLLLEMLTFNPHKRISA 283
Query: 420 LQV 422
+
Sbjct: 284 FRA 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 17/64 (26%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN----------REMQIMRRL---EHSN 76
IG G++G VY+A+ SG VA+K V R N RE+ ++RRL EH N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 77 IVKL 80
+V+L
Sbjct: 68 VVRL 71
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 197 ISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRS 256
+ RL++ +SR ++ + LV E + + + P K + Q R
Sbjct: 68 VVRLMDVCATSRTD-REIKVTLVFEHVDQDLRTYLD--KAPPPGLPAETIKDLMRQFLRG 124
Query: 257 LAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELI 316
L ++H I HRD+KP+N+L+ G +KL DFG A+ + + +YRAPE++
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 317 FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 376
+ Y T +D+WS GC+ AE+ +P+F G+S DQL +I ++G P E + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSL 241
Query: 377 TEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
FP P V A L+ +L + P RIS +
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGA-QLLLEMLTFNPHKRISAFRA 286
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 17/64 (26%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN----------REMQIMRRL---EHSN 76
IG G++G VY+A+ SG VA+K V R N RE+ ++RRL EH N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 77 IVKL 80
+V+L
Sbjct: 68 VVRL 71
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 237 SKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKH 294
S++ F I Q+ + Y+H I HRD+KP+NLLL ++ +++ DFG + H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
+ I + YY APE++ G Y K DVWS G +L LL G P F G + D L
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
++ K YT F+ PQ W KV A DLI ++L Y PS
Sbjct: 237 KKVEK--------------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPS 271
Query: 415 SRISP 419
RIS
Sbjct: 272 MRISA 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-------KVLQDKRFKNREMQIMRRLEHSNIVKLK 81
V+G GSFG V K +G+ A+K K DK RE+Q++++L+H NI+KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 82 YFFYSSG 88
FF G
Sbjct: 93 EFFEDKG 99
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 237 SKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKH 294
S++ F I Q+ + Y+H I HRD+KP+NLLL ++ +++ DFG + H
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
+ I + YY APE++ G Y K DVWS G +L LL G P F G + D L
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 259
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
++ K YT F+ PQ W KV A DLI ++L Y PS
Sbjct: 260 KKVEK--------------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPS 294
Query: 415 SRISP 419
RIS
Sbjct: 295 MRISA 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-------KVLQDKRFKNREMQIMRRLEHSNIVKLK 81
V+G GSFG V K +G+ A+K K DK RE+Q++++L+H NI+KL
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 82 YFFYSSG 88
FF G
Sbjct: 116 EFFEDKG 122
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 237 SKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKH 294
S++ F I Q+ + Y+H I HRD+KP+NLLL ++ +++ DFG + H
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
+ I + YY APE++ G Y K DVWS G +L LL G P F G + D L
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 260
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
++ K YT F+ PQ W KV A DLI ++L Y PS
Sbjct: 261 KKVEK--------------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPS 295
Query: 415 SRISP 419
RIS
Sbjct: 296 MRISA 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-------KVLQDKRFKNREMQIMRRLEHSNIVKLK 81
V+G GSFG V K +G+ A+K K DK RE+Q++++L+H NI+KL
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 82 YFFYSSG 88
FF G
Sbjct: 117 EFFEDKG 123
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 237 SKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKH 294
S++ F I Q+ + Y+H I HRD+KP+NLLL ++ +++ DFG + H
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 184
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
+ I + YY APE++ G Y K DVWS G +L LL G P F G + D L
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 242
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
++ K YT F+ PQ W KV A DLI ++L Y PS
Sbjct: 243 KKVEK--------------GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPS 277
Query: 415 SRISP 419
RIS
Sbjct: 278 MRISA 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-------KVLQDKRFKNREMQIMRRLEHSNIVKLK 81
V+G GSFG V K +G+ A+K K DK RE+Q++++L+H NI+KL
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 82 YFFYSSG 88
FF G
Sbjct: 99 EFFEDKG 105
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 237 SKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKH 294
S++ F I Q+ + Y H I HRD+KP+NLLL ++ +++ DFG + H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 295 LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
+ I + YY APE++ G Y K DVWS G +L LL G P F G + D L
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236
Query: 355 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPS 414
++ K YT F+ PQ W KV A DLI + L Y PS
Sbjct: 237 KKVEK--------------GKYT-FELPQ-----WKKV-----SESAKDLIRKXLTYVPS 271
Query: 415 SRISP 419
RIS
Sbjct: 272 XRISA 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-------KVLQDKRFKNREMQIMRRLEHSNIVKLK 81
V+G GSFG V K +G+ A+K K DK RE+Q++++L+H NI KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 82 YFFYSSG 88
FF G
Sbjct: 93 EFFEDKG 99
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKKVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ D I +V EF FP
Sbjct: 197 YEFLVGKPPFEANTYQDTYKRISRV-----------------EFTFPDF----------- 228
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 229 -VTEGARDLISRLLKHNPSQR 248
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ +S ++A+K + + + K RE++I L H NI++L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 83 FFYSS 87
+F+ S
Sbjct: 76 YFHDS 80
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 111 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 166
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 167 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 222
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 257
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 258 ----GARDLISRLLKHNPSQR 274
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 83 FFYSS 87
+F+ +
Sbjct: 102 YFHDA 106
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 102 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 157
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 158 LGS-AGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 213
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 214 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 245
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 246 -VTEGARDLISRLLKHNPSQR 265
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 83 FFYSS 87
+F+ +
Sbjct: 93 YFHDA 97
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 111 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 166
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 167 LG-SAGELKIADFGWSVHAPSSRRDD--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 222
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 223 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 257
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 258 ----GARDLISRLLKHNPSQR 274
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 83 FFYSS 87
+F+ +
Sbjct: 102 YFHDA 106
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 86 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 141
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 142 LG-SAGELKIADFGWSVHAPSSRRDT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 197
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 229
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 230 -VTEGARDLISRLLKHNPSQR 249
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 75
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 90 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 145
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 146 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 201
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 233
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 234 -VTEGARDLISRLLKHNPSQR 253
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 79
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 -VTEGARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 ----GARDLISRLLKHNPSQR 248
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 218 LVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P VYK + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 90 LILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 145
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 146 LGS-AGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 201
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 233
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 234 -VTEGARDLISRLLKHNPSQR 253
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 83 FFYSS 87
+F+ +
Sbjct: 81 YFHDA 85
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LG-SAGELKIADFGWSVHAP--SSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 -VTEGARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHAP--SSRRTELCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 ----GARDLISRLLKHNPSQR 248
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LGS-AGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 -VTEGARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 84 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 139
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 140 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 195
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 196 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 230
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 231 ----GARDLISRLLKHNPSQR 247
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 73
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 114
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHAP--SSRRTXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 ----GARDLISRLLKHNPSQR 248
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 89 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 144
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 145 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 200
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 201 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 235
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 236 ----GARDLISRLLKHNPSQR 252
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 78
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 119
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 37/200 (18%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 86 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 141
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLA 336
L G LK+ DFG + H + + Y PE+I G + + K+D+WS G +
Sbjct: 142 LG-SAGELKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCY 198
Query: 337 ELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVR 396
E L+G+P F ++ + I +V EF FP
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF------------ 229
Query: 397 TPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 230 VTEGARDLISRLLKHNPSQR 249
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 75
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 87 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 142
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 143 LG-SAGELKIADFGWSVHAPSSRRXX--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 198
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 199 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 230
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 231 -VTEGARDLISRLLKHNPSQR 250
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 76
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 90 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 145
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 146 LG-SAGELKIADFGWSVHAP--SSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 201
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 233
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 234 -VTEGARDLISRLLKHNPSQR 253
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 79
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 86 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 141
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 142 LG-SAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 197
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 229
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 230 -VTEGARDLISRLLKHNPSQR 249
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 75
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHA--PSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 ----GARDLISRLLKHNPSQR 248
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK + T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 82 LILEYAPLGTVYRELQKLSKFDEQ----RTATYITELANALSYCHSKRVIHRDIKPENLL 137
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 138 LG-SAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 193
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 194 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 225
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 226 -VTEGARDLISRLLKHNPSQR 245
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ ++A+K + + + K RE++I L H NI++L Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 71
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 112
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 228
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 229 -VTEGARDLISRLLKHNPSQR 248
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LG-SAGELKIADFGWSVHAPSSRRDD--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 234
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 235 ----GARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 228
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 229 -VTEGARDLISRLLKHNPSQR 248
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 85 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 140
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 141 LG-SAGELKIADFGWSVHAP--SSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 196
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 ----GARDLISRLLKHNPSQR 248
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 74
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LGS-AGELKIADFGWSVHA--PSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 231
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 232 -VTEGARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 91/200 (45%), Gaps = 37/200 (18%)
Query: 218 LVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P VYK + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 90 LILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 145
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLA 336
L G LK+ DFG + H + Y PE+I G + + K+D+WS G +
Sbjct: 146 LGS-AGELKIADFGWSVH-APSSRRXXLXGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCY 202
Query: 337 ELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVR 396
E L+G+P F ++ + I +V EF FP
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF------------ 233
Query: 397 TPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 234 VTEGARDLISRLLKHNPSQR 253
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 83 FFYSS 87
+F+ +
Sbjct: 81 YFHDA 85
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 87 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 142
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ +FG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 143 LG-SAGELKIANFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 198
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 199 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 230
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 231 -VTEGARDLISRLLKHNPSQR 250
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 76
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG--VLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+F + Y+H I HRD+KP+N+LL + +K+ DFG + + I +
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
YY APE++ G Y K DVWSAG +L LL G P F G + D L
Sbjct: 187 AYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------- 231
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
+ + F PQ W + DA DLI ++L + PS RI+ Q
Sbjct: 232 --KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQ 273
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKL 80
++G GSFG V + K + + A+K V+ KN RE++++++L+H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 90 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 145
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE I G + K+D+WS G +
Sbjct: 146 LGS-AGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEXIEGRX-HDEKVDLWSLGVLC 201
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF----------- 233
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 234 -VTEGARDLISRLLKHNPSQR 253
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 79
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + SK F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 88 LILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ +FG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 144 LG-SAGELKIANFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 199
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G+P F ++ + I +V EF FP +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDFVTE-------- 234
Query: 396 RTPPDAIDLISRLLEYTPSSR 416
A DLISRLL++ PS R
Sbjct: 235 ----GARDLISRLLKHNPSQR 251
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S ++A+K + + + K RE++I L H NI++L Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL-Y 77
Query: 83 FFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNKVTTVV 118
++ + Y PL E K+S F + T +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG--VLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+F + Y+H I HRD+KP+N+LL + +K+ DFG + + I +
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
YY APE++ G Y K DVWSAG +L LL G P F G + D L
Sbjct: 187 AYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------- 231
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ + F PQ W + DA DLI ++L + PS RI+ Q
Sbjct: 232 --KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQC 274
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKL 80
++G GSFG V + K + + A+K V+ KN RE++++++L+H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG--VLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+F + Y+H I HRD+KP+N+LL + +K+ DFG + + I +
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGT 186
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
YY APE++ G Y K DVWSAG +L LL G P F G + D L
Sbjct: 187 AYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL------------- 231
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ + F PQ W + DA DLI ++L + PS RI+ Q
Sbjct: 232 --KRVETGKYAFDLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQC 274
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKL 80
++G GSFG V + K + + A+K V+ KN RE++++++L+H NI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 39/207 (18%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + S+ F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 89 LILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 144
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H + +C Y PE+I G + + K+D+WS G +
Sbjct: 145 LG-SNGELKIADFGWSVHAPSSRRDT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 200
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G P F + + I +V EF FP
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF----------- 232
Query: 396 RTPPDAIDLISRLLEYTPSSRISPLQV 422
A DLISRLL++ S R++ +V
Sbjct: 233 -VTEGARDLISRLLKHNASQRLTLAEV 258
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK--- 62
G LG + +T D D +G G FG VY A+ S ++A+K + + + K
Sbjct: 1 GPLGSKRQWT-LEDFDIGRP----LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV 55
Query: 63 ----NREMQIMRRLEHSNIVKLKYFFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNK 113
RE++I L H NI++L Y ++ + Y PL E K+S F +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRL-YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 114 VTTVV 118
T +
Sbjct: 115 ATYIT 119
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 39/207 (18%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L+LE+ P TVY+ + S+ F T YI +L +L+Y H + HRDIKP+NLL
Sbjct: 89 LILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 144
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVL 335
L G LK+ DFG + H +C Y PE+I G + + K+D+WS G +
Sbjct: 145 LG-SNGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLC 200
Query: 336 AELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRV 395
E L+G P F + + I +V EF FP
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF----------- 232
Query: 396 RTPPDAIDLISRLLEYTPSSRISPLQV 422
A DLISRLL++ S R++ +V
Sbjct: 233 -VTEGARDLISRLLKHNASQRLTLAEV 258
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK--- 62
G LG + +T D D +G G FG VY A+ S ++A+K + + + K
Sbjct: 1 GPLGSKRQWT-LEDFDIGRP----LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV 55
Query: 63 ----NREMQIMRRLEHSNIVKLKYFFYSSGDKKDEPTNYPPL-----EDMKISTFSPRNK 113
RE++I L H NI++L Y ++ + Y PL E K+S F +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRL-YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 114 VTTVV 118
T +
Sbjct: 115 ATYIT 119
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV- 302
FYTK Q+ L Y+H I HRDIK N+L+N +GVLK+ DFG++K L P
Sbjct: 126 FYTK----QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181
Query: 303 SYICSRYYRAPELI-FGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
++ + Y APE+I G Y D+WS GC + E+ G+P F
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 25 AQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFK---NREMQIMRRLEHSNIVKL 80
+ V+G G++GIVY + L + +AIK++ +D R+ + E+ + + L+H NIV+
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 81 KYFFYSSG 88
F +G
Sbjct: 85 LGSFSENG 92
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 210 SPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV-LGICHR 268
P V + +V E + E + + K Y + P Y K QL L Y+H GI H
Sbjct: 99 GPNGVHVVMVFEVLGENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRCGIIHT 156
Query: 269 DIKPQNLLL----NPETGV-LKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYT 323
DIKP+N+L+ +PE + +K+ D G+A E + I +R YR+PE++ GA +
Sbjct: 157 DIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGA-PWG 213
Query: 324 TKIDVWSAGCVLAELLLGQPMFPGDSGV------DQLVEIIKVLG 362
D+WS C++ EL+ G +F D G D + +II++LG
Sbjct: 214 CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 210 SPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV-LGICHR 268
P V + +V E + E + + K Y + P Y K QL L Y+H GI H
Sbjct: 99 GPNGVHVVMVFEVLGENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRCGIIHT 156
Query: 269 DIKPQNLLL----NPETGV-LKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYT 323
DIKP+N+L+ +PE + +K+ D G+A E + I +R YR+PE++ GA +
Sbjct: 157 DIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGA-PWG 213
Query: 324 TKIDVWSAGCVLAELLLGQPMFPGDSGV------DQLVEIIKVLG 362
D+WS C++ EL+ G +F D G D + +II++LG
Sbjct: 214 CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 244 FYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV- 302
FYTK Q+ L Y+H I HRDIK N+L+N +GVLK+ DFG++K L P
Sbjct: 112 FYTK----QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 167
Query: 303 SYICSRYYRAPELI-FGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
++ + Y APE+I G Y D+WS GC + E+ G+P F
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 25 AQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQ-DKRFK---NREMQIMRRLEHSNIVKL 80
+ V+G G++GIVY + L + +AIK++ + D R+ + E+ + + L+H NIV+
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 81 KYFFYSSG 88
F +G
Sbjct: 71 LGSFSENG 78
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 50/208 (24%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLL---------------------LNPETGVLKLCDF 289
YQ+ +S+ ++H + H D+KP+N+L +NP+ +K+ DF
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD---IKVVDF 181
Query: 290 GSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
GSA + E + + + +R+YRAPE+I A+ ++ DVWS GC+L E LG +FP
Sbjct: 182 GSATY--DDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 350 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSK-------VFRVRTP---- 398
+ L + ++LG + I++ K+ W + V R P
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKR----KYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294
Query: 399 --------PDAIDLISRLLEYTPSSRIS 418
DLI ++LEY P+ RI+
Sbjct: 295 MLSQDVEHERLFDLIQKMLEYDPAKRIT 322
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 238 KQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHL 295
+Q F + + Q+ Y+H I HRD+KP+NLLL ++ ++K+ DFG + H
Sbjct: 98 RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157
Query: 296 VRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLV 355
G + + YY APE++ Y K DVWS G +L LL G P F G +
Sbjct: 158 EVGGKMKERLGTAYYIAPEVLRKK--YDEKCDVWSCGVILYILLCGYPPFGGQT------ 209
Query: 356 EIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
+E ++ + F P W++V +A L+ +L Y PS
Sbjct: 210 ---------DQEILKRVEKGKFSFDPP-----DWTQV-----SDEAKQLVKLMLTYEPSK 250
Query: 416 RISP 419
RIS
Sbjct: 251 RISA 254
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 238 KQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHL 295
+Q F + + Q+ Y+H I HRD+KP+NLLL ++ ++K+ DFG + H
Sbjct: 115 RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
Query: 296 VRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLV 355
G + + YY APE++ Y K DVWS G +L LL G P F G + DQ
Sbjct: 175 EVGGKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-- 228
Query: 356 EIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
E ++ + F P W++V +A L+ +L Y PS
Sbjct: 229 -----------EILKRVEKGKFSFDPPD-----WTQV-----SDEAKQLVKLMLTYEPSK 267
Query: 416 RISP 419
RIS
Sbjct: 268 RISA 271
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 16 YFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR-------EMQI 68
YF L + + +G+G++G V K +G AIK + + E+ +
Sbjct: 15 YFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 69 MRRLEHSNIVKLKYFF 84
+++L+H NI+KL FF
Sbjct: 75 LKQLDHPNIMKLYEFF 90
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 50/208 (24%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLL---------------------LNPETGVLKLCDF 289
YQ+ +S+ ++H + H D+KP+N+L +NP+ +K+ DF
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD---IKVVDF 181
Query: 290 GSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
GSA + E + + + R+YRAPE+I A+ ++ DVWS GC+L E LG +FP
Sbjct: 182 GSATY--DDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 350 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSK-------VFRVRTP---- 398
+ L + ++LG + I++ K+ W + V R P
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKR----KYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294
Query: 399 --------PDAIDLISRLLEYTPSSRIS 418
DLI ++LEY P+ RI+
Sbjct: 295 MLSQDVEHERLFDLIQKMLEYDPAKRIT 322
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
K Y+ +L +L ++H LGI +RD+KP+N+LL+ E G +KL DFG +K + E C
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV-LGTP 364
Y APE++ +T D WS G ++ E+L G F G + + I+K LG P
Sbjct: 188 GTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 407
+ ++P K +P + R+ PD ++ I R
Sbjct: 247 -----QFLSPEAQSLLRMLFKRNPAN---RLGAGPDGVEEIKR 281
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 29 VIGNGSFGIVYQAKLL---DSGELVAIKKVLQDKRFKNR-------EMQIMRRLEHSNIV 78
V+G GSFG V+ K + D+ +L A+K VL+ K R E I+ + H IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 79 KLKYFFYSSG 88
KL Y F + G
Sbjct: 90 KLHYAFQTEG 99
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGV-LKLCDFGSAKHLVRGEPNVSYICSR-- 308
Q+F +L Y+H GICHRDIKP+N L + +KL DFG +K + Y +
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235
Query: 309 ---YYRAPELIFGAID-YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII------ 358
Y+ APE++ + Y K D WSAG +L LL+G FPG + D + +++
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 359 -----KVLGTPTREQIREMNPNYTEFKFPQIKS--HPWSKVF 393
VL R+ + + + +F +++ HPW F
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF 337
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDK----------RFKNREMQIMRRLEHSN 76
K IG GS+G+V A + + AIK + ++K R K E+++M++L H N
Sbjct: 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLHHPN 89
Query: 77 IVKL 80
I +L
Sbjct: 90 IARL 93
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 263 LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAID- 321
L I HRDIKP N+LL+ +G +KLCDFG + LV R Y APE I +
Sbjct: 145 LKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 322 --YTTKIDVWSAGCVLAELLLGQPMFPG-DSGVDQLVEIIKVLGTP---TREQIREMNPN 375
Y + DVWS G L EL G+ +P +S DQL +++K G P + + RE +P+
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQLSNSEEREFSPS 261
Query: 376 YTEF-------------KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ F K+ ++ HP+ ++ R A + ++L+ P++ SP+ V
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVAC-YVCKILDQMPATPSSPMYV 320
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
K Y+ +L +L ++H LGI +RD+KP+N+LL+ E G +KL DFG +K + E C
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFC 188
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV-LGTP 364
Y APE++ +T D WS G ++ E+L G F G + + I+K LG P
Sbjct: 189 GTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 407
+ ++P K +P + R+ PD ++ I R
Sbjct: 248 -----QFLSPEAQSLLRMLFKRNPAN---RLGAGPDGVEEIKR 282
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 29 VIGNGSFGIVYQAKLL---DSGELVAIKKVLQDKRFKNR-------EMQIMRRLEHSNIV 78
V+G GSFG V+ K + D+ +L A+K VL+ K R E I+ + H IV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 79 KLKYFFYSSG 88
KL Y F + G
Sbjct: 91 KLHYAFQTEG 100
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
K Y+ +L +L ++H LGI +RD+KP+N+LL+ E G +KL DFG +K + E C
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV-LGTP 364
Y APE++ +T D WS G ++ E+L G F G + + I+K LG P
Sbjct: 188 GTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISR 407
+ ++P K +P + R+ PD ++ I R
Sbjct: 247 -----QFLSPEAQSLLRMLFKRNPAN---RLGAGPDGVEEIKR 281
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 29 VIGNGSFGIVYQAKLL---DSGELVAIKKVLQDKRFKNR-------EMQIMRRLEHSNIV 78
V+G GSFG V+ K + D+ +L A+K VL+ K R E I+ + H IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 79 KLKYFFYSSG 88
KL Y F + G
Sbjct: 90 KLHYAFQTEG 99
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 108 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 215
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 216 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 253
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
K Y+ +L L ++H LGI +RD+KP+N+LL+ E G +KL DFG +K + E C
Sbjct: 133 KFYLAELALGLDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFC 191
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV-LGTP 364
Y APE++ ++ D WS G ++ E+L G F G + + I+K LG P
Sbjct: 192 GTVEYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 29 VIGNGSFGIVYQAKLL---DSGELVAIKKVLQDKRFKNR-------EMQIMRRLEHSNIV 78
V+G GSFG V+ + + DSG L A+K VL+ K R E I+ + H +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 79 KLKYFFYSSG 88
KL Y F + G
Sbjct: 94 KLHYAFQTEG 103
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--HLVRGEPNVSYIC 306
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A E ++ +C
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 307 SRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICSRYY 310
+ ++AY H L + HRD+KP+N L ++ LKL DFG A G+ + + + YY
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYY 191
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
+P+++ G Y + D WSAG ++ LL G P F + + +++I + GT
Sbjct: 192 VSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT------- 240
Query: 371 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
F FP+ W V P A LI RLL +P RI+ LQ
Sbjct: 241 --------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQA 276
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 18 SDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV----LQD-KRFKNREMQIMRRL 72
D++ + IG GS+G V A + A KK+ ++D RFK +E++IM+ L
Sbjct: 22 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-QEIEIMKSL 80
Query: 73 EHSNIVKLKYFFYSSGD 89
+H NI++L F + D
Sbjct: 81 DHPNIIRLYETFEDNTD 97
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICSRYY 310
+ ++AY H L + HRD+KP+N L ++ LKL DFG A G+ + + + YY
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYY 174
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
+P+++ G Y + D WSAG ++ LL G P F + + ++ +IR
Sbjct: 175 VSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVML------------KIR 220
Query: 371 EMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
E F FP+ W V P A LI RLL +P RI+ LQ
Sbjct: 221 EGT-----FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQA 259
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 18 SDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV----LQD-KRFKNREMQIMRRL 72
D++ + IG GS+G V A + A KK+ ++D RFK +E++IM+ L
Sbjct: 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK-QEIEIMKSL 63
Query: 73 EHSNIVKLKYFFYSSGD 89
+H NI++L F + D
Sbjct: 64 DHPNIIRLYETFEDNTD 80
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 216 LNLVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
LN+VLE + ++ KH+ K K+ P Y QL +L ++H + HRDIKP N
Sbjct: 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166
Query: 275 LLLNPETGVLKLCDFG---------SAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTK 325
+ + TGV+KL D G +A H + G P YY +PE I Y K
Sbjct: 167 VFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTP--------YYMSPERIHEN-GYNFK 216
Query: 326 IDVWSAGCVLAELLLGQPMFPGD 348
D+WS GC+L E+ Q F GD
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYGD 239
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV----LQDKRFKN---REMQIMRRLEHSNIVKLKY 82
IG G F VY+A L G VA+KKV L D + + +E+ ++++L H N++K
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK--- 96
Query: 83 FFYSS 87
+Y+S
Sbjct: 97 -YYAS 100
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 37/227 (16%)
Query: 241 FPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL------------------NPETG 282
+P + +QL +++ ++H + H D+KP+N+L + ++
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 283 VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
+++ DFGSA E + + + +R+YRAPE+I + ++ DVWS GC++ E +G
Sbjct: 194 AVRVVDFGSAT--FDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIR-------------EMNPNYTEFKFPQIKSHPW 389
+F + L + ++LG IR + + N + ++ + P
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Query: 390 SKVF--RVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLIELRA 434
+ DLI +LEY P+ R++ + PF LRA
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQ-HPFFARLRA 356
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPN-VS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L GE + +
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMR 174
Query: 304 YICSR-YYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+C Y APE++ G Y +D WS G +L L G P F L
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------ 228
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 229 -----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ + Y+H I HRD+KP+NLLL + ++K+ DFG + + + +
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
YY APE++ Y K DVWS G +L LL G P F G + +E
Sbjct: 202 AYYIAPEVLRKK--YDEKCDVWSIGVILFILLAGYPPFGGQT---------------DQE 244
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+R++ F P+ W V A DLI ++L++ RIS Q
Sbjct: 245 ILRKVEKGKYTFDSPE-----WKNV-----SEGAKDLIKQMLQFDSQRRISAQQA 289
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGV--LKLCDF--GSAKHLVRG-----EPNVSYIC 306
+L ++H GI HRD+KP+N+L V +K+CDF GS L P ++ C
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 307 -SRYYRAPELIFGAID----YTTKIDVWSAGCVLAELLLGQPMFPGDSGVD---QLVEII 358
S Y APE++ D Y + D+WS G VL +L G P F G G D E+
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 359 KVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+V E I+E +++FP W+ + +A DLIS+LL R+S
Sbjct: 243 RVCQNKLFESIQE-----GKYEFP---DKDWAHI-----SSEAKDLISKLLVRDAKQRLS 289
Query: 419 PLQV 422
QV
Sbjct: 290 AAQV 293
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPN-VS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L GE + +
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMR 174
Query: 304 YICSR-YYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+C Y APE++ G Y +D WS G +L L G P F L
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------ 228
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 229 -----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 268
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPN-VS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L GE + +
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMR 174
Query: 304 YICSR-YYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+C Y APE++ G Y +D WS G +L L G P F L
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------ 228
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 229 -----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 268
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPN-VS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L GE + +
Sbjct: 116 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMR 173
Query: 304 YICSR-YYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+C Y APE++ G Y +D WS G +L L G P F L
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------ 227
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 228 -----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 267
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPN-VS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L GE + +
Sbjct: 123 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMR 180
Query: 304 YICSR-YYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+C Y APE++ G Y +D WS G +L L G P F L
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------ 234
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 235 -----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPNVS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L +
Sbjct: 255 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 314
Query: 304 YICSRYYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ Y APE++ G Y +D WS G +L L G P F L
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------- 367
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 368 ----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 407
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 32/181 (17%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++LAY+H G+ HRDIK ++LL + G +KL DFG + + P + Y+
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWM 208
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIRE 371
APE+I ++ Y T++D+WS G ++ E++ G+P + DS V + +++R+
Sbjct: 209 APEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLRD 255
Query: 372 MNPNYTEFKFPQIK-SHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFLI 430
P P++K SH S V R D + R+L P R + ++ PFL+
Sbjct: 256 SPP-------PKLKNSHKVSPVLR--------DFLERMLVRDPQERATAQELLD-HPFLL 299
Query: 431 E 431
+
Sbjct: 300 Q 300
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A+ SG VA+K + D R + R E+ IMR +H N+V++ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEM-YK 109
Query: 84 FYSSGDK 90
Y G++
Sbjct: 110 SYLVGEE 116
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPNVS 303
KLY YQ+ ++ Y+H GI HRD+KP+N+LL+ E ++K+ DFG +K L +
Sbjct: 241 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 300
Query: 304 YICSRYYRAPELI--FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+ Y APE++ G Y +D WS G +L L G P F L
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL------- 353
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
++QI N+ P++ W++V A+DL+ +LL P +R +
Sbjct: 354 ----KDQITSGKYNF----IPEV----WAEV-----SEKALDLVKKLLVVDPKARFT 393
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL-LNPETGVL------------- 284
Q +P + + YQL +L ++H + H D+KP+N+L +N E L
Sbjct: 118 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177
Query: 285 ----KLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLL 340
++ DFGSA E + + + +R+YR PE+I + + DVWS GC+L E
Sbjct: 178 NTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 234
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIRE-------------MNPNYTEFKFPQIKSH 387
G +F + LV + K+LG I + N ++ ++ +
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294
Query: 388 PWSKVFRVRTPPDAI---DLISRLLEYTPSSRISPLQVRSITPFLIEL 432
P K + ++ + + DL+ R+LE+ P+ RI+ L + PF L
Sbjct: 295 PL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT-LAEALLHPFFAGL 340
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL-LNPETGVL------------- 284
Q +P + + YQL +L ++H + H D+KP+N+L +N E L
Sbjct: 127 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 186
Query: 285 ----KLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLL 340
++ DFGSA E + + + +R+YR PE+I + + DVWS GC+L E
Sbjct: 187 NTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 243
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIRE-------------MNPNYTEFKFPQIKSH 387
G +F + LV + K+LG I + N ++ ++ +
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 303
Query: 388 PWSKVFRVRTPPDAI---DLISRLLEYTPSSRISPLQVRSITPFLIEL 432
P K + ++ + + DL+ R+LE+ P+ RI+ L + PF L
Sbjct: 304 PL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT-LAEALLHPFFAGL 349
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL-LNPETGVL------------- 284
Q +P + + YQL +L ++H + H D+KP+N+L +N E L
Sbjct: 150 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 209
Query: 285 ----KLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLL 340
++ DFGSA E + + + +R+YR PE+I + + DVWS GC+L E
Sbjct: 210 NTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYR 266
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIRE-------------MNPNYTEFKFPQIKSH 387
G +F + LV + K+LG I + N ++ ++ +
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 326
Query: 388 PWSKVFRVRTPPDAI---DLISRLLEYTPSSRISPLQVRSITPFLIEL 432
P K + ++ + + DL+ R+LE+ P+ RI+ L + PF L
Sbjct: 327 PL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT-LAEALLHPFFAGL 372
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---KHLVRGEPNVSYI 305
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A ++ R
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Query: 218 LVLEFMP--ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L+LEF P E ++ KH +Q F + +L +L Y H + HRDIKP+NL
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATF-----MEELADALHYCHERKVIHRDIKPENL 145
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVS--YICSRY-YRAPELIFGAIDYTTKIDVWSAG 332
L+ G LK+ DFG + H P++ +C Y PE+I G + K+D+W AG
Sbjct: 146 LMG-YKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAG 199
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKV 392
+ E L+G P F S + I+ V + KFP S
Sbjct: 200 VLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPFLS------ 236
Query: 393 FRVRTPPDAIDLISRLLEYTPSSRI 417
+ DLIS+LL Y P R+
Sbjct: 237 ------DGSKDLISKLLRYHPPQRL 255
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ + ++A+K + + + K RE++I L H NI+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 83 FFYS 86
+F+
Sbjct: 82 YFHD 85
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---KHLVRGEPNVSYI 305
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A ++ R
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S++ + Y +PEL+ + D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 193 -SFVGTAQYVSPELL-TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 249
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 282 MEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---KHLVRGEPNVSYI 305
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A ++ R
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Query: 218 LVLEFMP--ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L+LEF P E ++ KH +Q F + +L +L Y H + HRDIKP+NL
Sbjct: 92 LMLEFAPRGELYKELQKHGRFDEQRSATF-----MEELADALHYCHERKVIHRDIKPENL 146
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVS--YICSRY-YRAPELIFGAIDYTTKIDVWSAG 332
L+ G LK+ DFG + H P++ +C Y PE+I G + K+D+W AG
Sbjct: 147 LMG-YKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAG 200
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKV 392
+ E L+G P F S + I+ V + KFP S
Sbjct: 201 VLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPFLS------ 237
Query: 393 FRVRTPPDAIDLISRLLEYTPSSRI 417
+ DLIS+LL Y P R+
Sbjct: 238 ------DGSKDLISKLLRYHPPQRL 256
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ + ++A+K + + + K RE++I L H NI+++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 83 FFYS 86
+F+
Sbjct: 83 YFHD 86
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---KHLVRGEPNVSYI 305
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A ++ R
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 217
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 218 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 45/205 (21%)
Query: 218 LVLEFMP--ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L+LEF P E ++ KH +Q F + +L +L Y H + HRDIKP+NL
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATF-----MEELADALHYCHERKVIHRDIKPENL 145
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVS--YICSRY-YRAPELIFGAIDYTTKIDVWSAG 332
L+ G LK+ DFG + H P++ +C Y PE+I G + K+D+W AG
Sbjct: 146 LMG-YKGELKIADFGWSVH----APSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAG 199
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKV 392
+ E L+G P F S + I+ V + KFP S
Sbjct: 200 VLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPFLS------ 236
Query: 393 FRVRTPPDAIDLISRLLEYTPSSRI 417
+ DLIS+LL Y P R+
Sbjct: 237 ------DGSKDLISKLLRYHPPQRL 255
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ + ++A+K + + + K RE++I L H NI+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 83 FFYS 86
+F+
Sbjct: 82 YFHD 85
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---KHLVRGEPNVSYI 305
+ +QL + Y+H +GI HRDIKP+NLLL+ E LK+ DFG A ++ R
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ Y APEL+ + +DVWS G VL +L G+ P D D E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE--------- 216
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
Y+++K + +PW K + + P A L+ ++L PS+RI+
Sbjct: 217 ----------YSDWKEKKTYLNPWKK---IDSAPLA--LLHKILVENPSARIT 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 253 LFRSLAYI-HVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
+ R LAY+ I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYM 180
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDS 349
APE + G Y+ + D+WS G L EL +G+ P+ P D+
Sbjct: 181 APERLQGT-HYSVQSDIWSMGLSLVELAVGRYPIPPPDA 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ R + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF I Y+TK DVWS G +L E+ LG +PG V++ + +
Sbjct: 263 LPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCSR 314
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
RE +R P Y+ + QI W + + R P +L+ +L
Sbjct: 315 LREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + ICHRD+K +N LL+ LK+CDFG +K V S
Sbjct: 118 ARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y KI DVWS G L +L+G F
Sbjct: 178 VGTPAYIAPEVLLRQ-EYDGKIADVWSCGVTLYVMLVGAYPF------------------ 218
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
E E P +I S +S +R P+ LISR+ P++RIS +++
Sbjct: 219 ---EDPEE--PRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIK 273
Query: 424 SITPFLIELRAVFEN 438
+ + FL L A N
Sbjct: 274 THSWFLKNLPADLMN 288
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK---NREMQIMRRLEHSNIVKLK 81
IG+G+FG+ + + ELVA+K + + RE+ R L H NIV+ K
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 189
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 190 -SFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 246
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 247 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 278
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 279 MEGYGP--LKAHPFFESVTW 296
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 94
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 95 YFTFQDDEK 103
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 193
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
S++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 194 -SFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 250
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 251 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 282
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 283 MEGYGP--LKAHPFFESVTW 300
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 98
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 99 YFTFQDDEK 107
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 40/201 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF-PGDSGVDQLVEIIKV 360
++ + Y +PEL+ + D+W+ GC++ +L+ G P F G+ G+ +IIK+
Sbjct: 193 -XFVGTAQYVSPELLTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKL 249
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E+ FP+ K F P A DL+ +LL + R+
Sbjct: 250 -----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCE 280
Query: 421 QVRSITPFLIELRAVFENICF 441
++ P ++ FE++ +
Sbjct: 281 EMEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 31/182 (17%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
T+ + L +++++H I HRD+KP+N+LL+ + +L DFG + HL GE
Sbjct: 202 TRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQI-RLSDFGFSCHLEPGEKLRELC 260
Query: 306 CSRYYRAPELIFGAID-----YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ Y APE++ ++D Y ++D+W+ G +L LL G P F + L I
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI--- 317
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
M Y Q S W R T DLISRLL+ P +R++
Sbjct: 318 -----------MEGQY------QFSSPEWDD--RSST---VKDLISRLLQVDPEARLTAE 355
Query: 421 QV 422
Q
Sbjct: 356 QA 357
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 57/291 (19%)
Query: 148 EIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDA-IDLISRLLEYTPS 206
E++KVLGT ++ F +I H K++ ++ A I ++ E+T +
Sbjct: 57 ELLKVLGTGAYGKV---------FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT 107
Query: 207 SRI-------SPLQVFLNLVLEFMPETVYKVAKHYSKS---------KQNFPCFYTKLYI 250
R SP V L+ F ET + Y ++ F ++Y+
Sbjct: 108 ERQVLEHIRQSPFLVTLHYA--FQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 165
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY-ICSRY 309
++ +L ++H LGI +RDIK +N+LL+ G + L DFG +K V E +Y C
Sbjct: 166 GEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 310 -YRAPELIFGA-IDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y AP+++ G + +D WS G ++ ELL G F D + EI +
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-------- 276
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+I + P Y PQ S A DLI RLL P R+
Sbjct: 277 RILKSEPPY-----PQEMS------------ALAKDLIQRLLMKDPKKRLG 310
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 32/152 (21%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--------------- 293
Y+ LF++L IH GI HRD+KP N L N L DFG A+
Sbjct: 122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 294 --HLVRGEPNVSYIC-SRY-----------YRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
R N IC SR +RAPE++ + TT ID+WSAG + LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 340 LGQ-PMFPGDSGVDQLVEIIKVLGTPTREQIR 370
G+ P + + L +I+ + G +RE I+
Sbjct: 242 SGRYPFYKASDDLTALAQIMTIRG--SRETIQ 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 40/201 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF-PGDSGVDQLVEIIKV 360
++ + Y +PEL+ D+W+ GC++ +L+ G P F G+ G+ +IIK+
Sbjct: 193 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKL 249
Query: 361 LGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPL 420
E+ FP+ K F P A DL+ +LL + R+
Sbjct: 250 -----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCE 280
Query: 421 QVRSITPFLIELRAVFENICF 441
++ P ++ FE++ +
Sbjct: 281 EMEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 190
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
+++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 191 -AFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 247
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 280 MEGYGP--LKAHPFFESVTW 297
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 96 YFTFQDDEK 104
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 233 HYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA 292
++ +S F Y ++ L ++H GI +RD+K N+LL+ + G +K+ DFG
Sbjct: 107 YHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD-GHIKIADFGMC 165
Query: 293 KHLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPG 347
K + G+ + C Y APE++ G Y +D WS G +L E+L+GQ F G
Sbjct: 166 KENMLGDAKTNXFCGTPDYIAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 30/180 (16%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNV 302
Y + Q+ +LAY H + H+D+KP+N+L + +K+ DFG A+ E +
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
+ + Y APE+ D T K D+WSAG V+ LL G F G S L E+
Sbjct: 185 NAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV----- 233
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+++ PNY ++ P + P A+DL+ ++L P R S QV
Sbjct: 234 ---QQKATYKEPNYA------VECRPLT--------PQAVDLLKQMLTKDPERRPSAAQV 276
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 12 KNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDK-----RFKNREM 66
+N + +D+ K +G+G+FG V+ + SG IK + +D+ E+
Sbjct: 12 ENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEI 71
Query: 67 QIMRRLEHSNIVKL 80
++++ L+H NI+K+
Sbjct: 72 EVLKSLDHPNIIKI 85
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 233 HYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA 292
++ +S F Y ++ L ++H GI +RD+K N+LL+ + G +K+ DFG
Sbjct: 108 YHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD-GHIKIADFGMC 166
Query: 293 KHLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPG 347
K + G+ + C Y APE++ G Y +D WS G +L E+L+GQ F G
Sbjct: 167 KENMLGDAKTNEFCGTPDYIAPEILLGQ-KYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 168
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 169 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 225
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 226 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 257
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 258 MEGYGP--LKAHPFFESVTW 275
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR--------FKNREMQIMRRLEHSNIVKL 80
++G GSF V A+ L + AIK +L+ + + RE +M RL+H VKL
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 81 KYFFYSSGDK 90
YF + +K
Sbjct: 74 -YFTFQDDEK 82
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 190
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 191 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 247
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 280 MEGYGP--LKAHPFFESVTW 297
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 96 YFTFQDDEK 104
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 109 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 167
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 168 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 224
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 225 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 256
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 257 MEGYGP--LKAHPFFESVTW 274
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR--------FKNREMQIMRRLEHSNIVKL 80
++G GSF V A+ L + AIK +L+ + + RE +M RL+H VKL
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 81 KYFFYSSGDK 90
YF + +K
Sbjct: 73 -YFTFQDDEK 81
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV--- 302
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L
Sbjct: 112 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 170
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 171 XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-- 227
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
E+ FP+ K F P A DL+ +LL + R+ ++
Sbjct: 228 ---------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEM 260
Query: 423 RSITPFLIELRAVFENICF 441
P ++ FE++ +
Sbjct: 261 EGYGP--LKAHPFFESVTW 277
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 75
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 76 YFTFQDDEK 84
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV--- 302
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L
Sbjct: 111 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 169
Query: 303 SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLG 362
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 170 XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-- 226
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
E+ FP+ K F P A DL+ +LL + R+ ++
Sbjct: 227 ---------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEM 259
Query: 423 RSITPFLIELRAVFENICF 441
P ++ FE++ +
Sbjct: 260 EGYGP--LKAHPFFESVTW 276
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR--------FKNREMQIMRRLEHSNIVKL 80
++G GSF V A+ L + AIK +L+ + + RE +M RL+H VKL
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 81 KYFFYSSGDK 90
YF + +K
Sbjct: 75 -YFTFQDDEK 83
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 190
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 191 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 247
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 280 MEGYGP--LKAHPFFESVTW 297
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 96 YFTFQDDEK 104
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 190
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 191 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 247
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 248 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 279
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 280 MEGYGP--LKAHPFFESVTW 297
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 96 YFTFQDDEK 104
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 193 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 249
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 282 MEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 193 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 249
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 282 MEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 193
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 194 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 250
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 251 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 282
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 283 MEGYGP--LKAHPFFESVTW 300
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 98
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 99 YFTFQDDEK 107
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 192
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 193 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 249
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 250 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 281
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 282 MEGYGP--LKAHPFFESVTW 299
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 97
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 98 YFTFQDDEK 106
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 189
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 190 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 246
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 247 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 278
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 279 MEGYGP--LKAHPFFESVTW 296
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 94
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 95 YFTFQDDEK 103
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 116 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 174
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 175 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 231
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 232 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 263
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 264 MEGYGP--LKAHPFFESVTW 281
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 79
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 80 YFTFQDDEK 88
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 139 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 197
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 198 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 254
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP+ K F P A DL+ +LL + R+ +
Sbjct: 255 ----------------EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEE 286
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 287 MEGYGP--LKAHPFFESVTW 304
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 102
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 103 YFCFQDDEK 111
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRG 298
++ CFY + ++ +L ++H GI +RD+KP+N++LN + G +KL DFG K +
Sbjct: 120 EDTACFY----LAEISMALGHLHQKGIIYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHD 174
Query: 299 EPNVSYICSRY-YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
C Y APE++ + + +D WS G ++ ++L G P F G++ + +I
Sbjct: 175 GTVTHXFCGTIEYMAPEILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
Query: 358 IKV 360
+K
Sbjct: 234 LKC 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR- 297
++ CFY + ++ +L ++H GI +RD+KP+N++LN + G +KL DFG K +
Sbjct: 120 EDTACFY----LAEISMALGHLHQKGIIYRDLKPENIMLNHQ-GHVKLTDFGLCKESIHD 174
Query: 298 GEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
G ++ + Y APE++ + + +D WS G ++ ++L G P F G++ + +I
Sbjct: 175 GTVTHTFCGTIEYMAPEILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
Query: 358 IKV 360
+K
Sbjct: 234 LKC 236
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 236 KSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL 295
+ Q FP K Y ++ +L Y+H I +RD+KP+N+LL+ + G +K+ DFG AK++
Sbjct: 98 RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAKYV 156
Query: 296 VRGEPNVSY-ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ 353
P+V+Y +C Y APE++ Y ID WS G ++ E+L G F DS +
Sbjct: 157 ----PDVTYXLCGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMK 210
Query: 354 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTP 413
E K+L E +FP + D DL+SRL+
Sbjct: 211 TYE--KILN--------------AELRFPPFFNE------------DVKDLLSRLITRDL 242
Query: 414 SSRISPLQ 421
S R+ LQ
Sbjct: 243 SQRLGNLQ 250
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVL--KLCDFGSAKHLVRGEPNVSYICSRY 309
Q+ + Y+H I HRDIKP+N+LL + +L K+ DFG + + + + Y
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
Y APE++ Y K DVWS G ++ LL G P F G + D + ++ K
Sbjct: 214 YIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 215 FLNLVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L +V+E+MP + + +Y + P + + Y ++ +L IH +G HRD+KP
Sbjct: 143 YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 197
Query: 274 NLLLNPETGVLKLCDFGSA-----KHLVRGEPNVSYICSRYYRAPELI---FGAIDYTTK 325
N+LL+ ++G LKL DFG+ + +VR + V + Y +PE++ G Y +
Sbjct: 198 NMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRE 253
Query: 326 IDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
D WS G L E+L+G F DS V +I+
Sbjct: 254 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 37/166 (22%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYT---KLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L+ E + ++Y++ ++ N+ F+ KLY ++ ++L Y+ + + H D+KP+N
Sbjct: 113 LIFEPLGPSLYEII-----TRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN 167
Query: 275 LLLN-------------------------PETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
+LL+ TG+ KL DFG A + + + S I +R
Sbjct: 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI-KLIDFGCAT--FKSDYHGSIINTRQ 224
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLV 355
YRAPE+I + + D+WS GCVLAEL G +F ++ L
Sbjct: 225 YRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 215 FLNLVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L +V+E+MP + + +Y + P + + Y ++ +L IH +G HRD+KP
Sbjct: 148 YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 202
Query: 274 NLLLNPETGVLKLCDFGSA-----KHLVRGEPNVSYICSRYYRAPELI---FGAIDYTTK 325
N+LL+ ++G LKL DFG+ + +VR + V + Y +PE++ G Y +
Sbjct: 203 NMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRE 258
Query: 326 IDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
D WS G L E+L+G F DS V +I+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 193 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 240
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 241 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 275
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 233 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 280
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
+++FP + WS+V + LI LL+ P+ R+ +IT F+
Sbjct: 281 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRM------TITEFM 320
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 194 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 241
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 242 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 276
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 189 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 236
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 237 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 271
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 195 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 242
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 243 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 277
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 239 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 286
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
+++FP + WS+V + LI LL+ P+ R+ +IT F+
Sbjct: 287 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRM------TITEFM 326
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 188 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 235
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 236 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 270
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 189 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 236
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
+++FP + WS+V + LI LL+ P+ R+ +IT F+
Sbjct: 237 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRM------TITEFM 276
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 215 FLNLVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L +V+E+MP + + +Y + P + + Y ++ +L IH +G HRD+KP
Sbjct: 148 YLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 202
Query: 274 NLLLNPETGVLKLCDFGSA-----KHLVRGEPNVSYICSRYYRAPELI---FGAIDYTTK 325
N+LL+ ++G LKL DFG+ + +VR + V + Y +PE++ G Y +
Sbjct: 203 NMLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRE 258
Query: 326 IDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
D WS G L E+L+G F DS V +I+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 187 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 234
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 235 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 269
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 203 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 250
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 251 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N+L++ T +K+ DFG A+ + +V + I
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILIS-ATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS V
Sbjct: 181 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + YY AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 187 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 234
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++FP + WS+V + LI LL+ P+ R++
Sbjct: 235 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMT 269
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 28/175 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLL--NPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ S+AY H GI HR++KP+NLLL + +KL DFG A + E + +
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 193
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y +PE + Y+ +D+W+ G +L LL+G P F D +L IK
Sbjct: 194 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKA------- 244
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
+ +P S W V P+A LI +L P RI+ Q
Sbjct: 245 ---------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQA 282
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 3 VVNGELGFAKNYTYFSDLDN---SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDK 59
++N F+ NY +L S+ ++ V + + G+ + AK++++ +L A +D
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSA-----RDF 72
Query: 60 RFKNREMQIMRRLEHSNIVKL 80
+ RE +I R+L+H NIV+L
Sbjct: 73 QKLEREARICRKLQHPNIVRL 93
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + +CHRD+K +N LL+ LK+CDFG +K V S
Sbjct: 117 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 176
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y K+ DVWS G L +L+G F + I
Sbjct: 177 VGTPAYIAPEVLLKK-EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH---- 231
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
R +N Y + V P+ LISR+ P+ RIS ++R
Sbjct: 232 ------RILNVQYAIPDY-------------VHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 424 SITPFLIELRAVFEN 438
+ FL L A N
Sbjct: 273 NHEWFLKNLPADLMN 287
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK---NREMQIMRRLEHSNIVKLK 81
IG+G+FG+ + S ELVA+K + + ++ RE+ R L H NIV+ K
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFK 81
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 145 IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 201
Query: 325 KIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ D+WS G L E+ +G+ SG + E++
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 126 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 182
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDSGVD 352
+ D+WS G L E+ +G+ P+ P D+ D
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + +CHRD+K +N LL+ LK+CDFG +K V S
Sbjct: 116 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 175
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y K+ DVWS G L +L+G F + I
Sbjct: 176 VGTPAYIAPEVLLKK-EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH---- 230
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
R +N Y + V P+ LISR+ P+ RIS ++R
Sbjct: 231 ------RILNVQYAIPDY-------------VHISPECRHLISRIFVADPAKRISIPEIR 271
Query: 424 SITPFLIELRAVFEN 438
+ FL L A N
Sbjct: 272 NHEWFLKNLPADLMN 286
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN---REMQIMRRLEHSNIVKLK 81
IG+G+FG+ + S ELVA+K + + ++ RE+ R L H NIV+ K
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 80
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 37/193 (19%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLC 287
VA+ Y C I Q+ S+ + H+ GI HRD+KP+NLLL ++ +KL
Sbjct: 95 VAREYYSEADASHC------IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V+G+ + + Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 149 DFGLAIE-VQGDQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A DLI
Sbjct: 207 -WDEDQHRLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKDLI 241
Query: 406 SRLLEYTPSSRIS 418
+++L P+ RI+
Sbjct: 242 NKMLTINPAKRIT 254
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 16/62 (25%)
Query: 30 IGNGSFGIV-----------YQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIV 78
+G G+F +V Y AK++++ +L A +D + RE +I R L+H NIV
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-----RDHQKLEREARICRLLKHPNIV 66
Query: 79 KL 80
+L
Sbjct: 67 RL 68
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 188 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 244
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDA 270
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 235 SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKH 294
S ++ FP Y QL L Y+H GI H+DIKP NLLL G LK+ G A+
Sbjct: 100 SVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEA 158
Query: 295 L---VRGEPNVSYICSRYYRAPELIFGAIDYTT-KIDVWSAGCVLAELLLGQPMFPGDSG 350
L + + S ++ PE+ G ++ K+D+WSAG L + G F GD+
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN- 217
Query: 351 VDQLVEIIKV--------LGTPTREQIREM---NPNYTEFKFPQIKSHPWSKVFRVRTPP 399
+ +L E I G P + ++ M P F QI+ H W FR + PP
Sbjct: 218 IYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPA-KRFSIRQIRQHSW---FRKKHPP 273
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 64 REMQIMRRLEHSNIVKLKYFFYSSGDKK 91
+E+Q++RRL H N+++L Y+ +K
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQK 82
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 37/197 (18%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLC 287
VA+ Y C I Q+ ++ + H +G+ HRD+KP+NLLL + +KL
Sbjct: 113 VAREYYSEADASHC------IQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V GE + + Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 167 DFGLAIE-VEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPF 224
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A DLI
Sbjct: 225 -WDEDQHRLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKDLI 259
Query: 406 SRLLEYTPSSRISPLQV 422
+++L PS RI+ +
Sbjct: 260 NKMLTINPSKRITAAEA 276
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 16/62 (25%)
Query: 30 IGNGSFGIV-----------YQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIV 78
+G G+F +V Y AK++++ +L A +D + RE +I R L+H NIV
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA-----RDHQKLEREARICRLLKHPNIV 84
Query: 79 KL 80
+L
Sbjct: 85 RL 86
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N++++ T +K+ DFG A+ + +V + I
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS V
Sbjct: 181 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV----RGEPN 301
T+ Y ++ +L Y+H GI HRD+KP+N+LLN + + ++ DFG+AK L + N
Sbjct: 137 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARAN 195
Query: 302 VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVL 361
++ + Y +PEL+ D+W+ GC++ +L+ G P F + +IIK+
Sbjct: 196 -XFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL- 252
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
E+ FP + F P A DL+ +LL + R+ +
Sbjct: 253 ----------------EYDFP-------AAFF-----PKARDLVEKLLVLDATKRLGCEE 284
Query: 422 VRSITPFLIELRAVFENICF 441
+ P ++ FE++ +
Sbjct: 285 MEGYGP--LKAHPFFESVTW 302
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKR--FKNREMQIMRRLEHSNIVKLK 81
++G GSF V A+ L + AIK ++++ + + RE +M RL+H VKL
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 100
Query: 82 YFFYSSGDK 90
YF + +K
Sbjct: 101 YFTFQDDEK 109
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+ LAY+H + HRD+K N+LL+ E G++KL DFGSA + P ++ + Y+ AP
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAP 219
Query: 314 ELIFGAID---YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
E+I A+D Y K+DVWS G EL +P + + L I
Sbjct: 220 EVIL-AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI------------- 265
Query: 371 EMNPNYTEFKFPQIKSHPWSKVFR 394
+ + P ++S WS+ FR
Sbjct: 266 ------AQNESPALQSGHWSEYFR 283
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 14/72 (19%)
Query: 17 FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIM 69
FSDL IG+GSFG VY A+ + + E+VAIKK+ + N +E++ +
Sbjct: 56 FSDLRE-------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 70 RRLEHSNIVKLK 81
++L H N ++ +
Sbjct: 109 QKLRHPNTIQYR 120
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N++++ T +K+ DFG A+ + +V + I
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS V
Sbjct: 181 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N++++ T +K+ DFG A+ + +V + I
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS
Sbjct: 181 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 37/193 (19%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLC 287
VA+ Y C I Q+ S+ + H+ GI HRD+KP+NLLL ++ +KL
Sbjct: 95 VAREYYSEADASHC------IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V+G+ + + Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 149 DFGLAIE-VQGDQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A DLI
Sbjct: 207 -WDEDQHRLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKDLI 241
Query: 406 SRLLEYTPSSRIS 418
+++L P+ RI+
Sbjct: 242 NKMLTINPAKRIT 254
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKL 80
+G G+F +V + + +G+ A K + +D + RE +I R L+H NIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N++++ T +K+ DFG A+ + +V + I
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS V
Sbjct: 181 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ S+AY H GI HR++KP+NLLL + +KL DFG A + E + +
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y +PE + Y+ +D+W+ G +L LL+G P F D +L IK
Sbjct: 171 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKA------- 221
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSI 425
+ +P S W V P+A LI +L P RI+ Q +
Sbjct: 222 ---------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKV 262
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 15 TYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK--NREMQI 68
T FSD + K +G G+F +V + +G A K K L + F+ RE +I
Sbjct: 2 TKFSD---NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 69 MRRLEHSNIVKL 80
R+L+H NIV+L
Sbjct: 59 CRKLQHPNIVRL 70
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 153 IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 209
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDA 235
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ + ++ P + + Y ++ +L Y+H GI +RD+K N+LL+ E G +KL D+G K
Sbjct: 143 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 201
Query: 294 HLVR-GEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+R G+ ++ + Y APE++ G DY +D W+ G ++ E++ G+ F
Sbjct: 202 EGLRPGDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+ LAY+H + HRD+K N+LL+ E G++KL DFGSA + P ++ + Y+ AP
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAP 180
Query: 314 ELIFGAID---YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
E+I A+D Y K+DVWS G EL +P + + L I
Sbjct: 181 EVIL-AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI------------- 226
Query: 371 EMNPNYTEFKFPQIKSHPWSKVFR 394
+ + P ++S WS+ FR
Sbjct: 227 ------AQNESPALQSGHWSEYFR 244
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 14/72 (19%)
Query: 17 FSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIM 69
FSDL IG+GSFG VY A+ + + E+VAIKK+ + N +E++ +
Sbjct: 17 FSDLRE-------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 70 RRLEHSNIVKLK 81
++L H N ++ +
Sbjct: 70 QKLRHPNTIQYR 81
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 126 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 182
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L +V+E+MP + H + + F + + Y Q+ + Y+H L + +RD+KP+NL
Sbjct: 116 LYMVMEYMPGG--DMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCV 334
L++ + G +K+ DFG AK R + +C Y APE+I Y +D W+ G +
Sbjct: 173 LID-QQGYIKVADFGFAK---RVKGRTWXLCGTPEYLAPEIILSK-GYNKAVDWWALGVL 227
Query: 335 LAELLLGQPMFPGD 348
+ E+ G P F D
Sbjct: 228 IYEMAAGYPPFFAD 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ + ++ P + + Y ++ +L Y+H GI +RD+K N+LL+ E G +KL D+G K
Sbjct: 111 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 169
Query: 294 HLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+R S C Y APE++ G DY +D W+ G ++ E++ G+ F
Sbjct: 170 EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 215 FLNLVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
+L +V+E+MP + + +Y + P + K Y ++ +L IH +G+ HRD+KP
Sbjct: 149 YLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPD 203
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSY----ICSRYYRAPELI---FGAIDYTTKI 326
N+LL+ + G LKL DFG+ + E + + + + Y +PE++ G Y +
Sbjct: 204 NMLLD-KHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 327 DVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
D WS G L E+L+G F DS V +I+
Sbjct: 261 DWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLC 287
VA+ Y C I+Q+ S+ +IH I HRD+KP+NLLL + +KL
Sbjct: 122 VAREYYSEADASHC------IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLA 175
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V+GE + + Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 176 DFGLAIE-VQGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPF 233
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A +LI
Sbjct: 234 -WDEDQHKLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKNLI 268
Query: 406 SRLLEYTPSSRISPLQV 422
+++L P+ RI+ Q
Sbjct: 269 NQMLTINPAKRITADQA 285
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 26/82 (31%)
Query: 10 FAKNYTYFSDLDNSLAQKTVIGNGSFGIV-----------YQAKLLDSGELVAIKKVLQD 58
F +Y F +L G G+F +V Y AK++++ +L A +D
Sbjct: 29 FTDDYQLFEEL----------GKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RD 73
Query: 59 KRFKNREMQIMRRLEHSNIVKL 80
+ RE +I R L+H NIV+L
Sbjct: 74 HQKLEREARICRLLKHPNIVRL 95
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 126 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 182
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 243 CFY---TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE 299
CF + Y ++ +L Y+H L I +RD+KP+N+LL+ + G + L DFG K +
Sbjct: 135 CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHN 193
Query: 300 PNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
S C Y APE++ Y +D W G VL E+L G P F
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L +V+E+MP + H + + F + + Y Q+ + Y+H L + +RD+KP+NL
Sbjct: 116 LYMVMEYMPGG--DMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCV 334
L++ + G +K+ DFG AK R + +C Y APE+I Y +D W+ G +
Sbjct: 173 LID-QQGYIKVADFGFAK---RVKGRTWXLCGTPEYLAPEIILSK-GYNKAVDWWALGVL 227
Query: 335 LAELLLGQPMFPGD 348
+ E+ G P F D
Sbjct: 228 IYEMAAGYPPFFAD 241
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ + ++ P + + Y ++ +L Y+H GI +RD+K N+LL+ E G +KL D+G K
Sbjct: 96 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 154
Query: 294 HLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+R S C Y APE++ G DY +D W+ G ++ E++ G+ F
Sbjct: 155 EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ S+AY H GI HR++KP+NLLL + +KL DFG A + E + +
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y +PE + Y+ +D+W+ G +L LL+G P F D +L IK
Sbjct: 171 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKA------- 221
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSI 425
+ +P S W V P+A LI +L P RI+ Q +
Sbjct: 222 ---------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKV 262
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 15 TYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK--NREMQI 68
T FSD + K +G G+F +V + +G A K K L + F+ RE +I
Sbjct: 2 TKFSD---NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 69 MRRLEHSNIVKL 80
R+L+H NIV+L
Sbjct: 59 CRKLQHPNIVRL 70
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ S+AY H GI HR++KP+NLLL + +KL DFG A + E + +
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 169
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y +PE + Y+ +D+W+ G +L LL+G P F D +L IK
Sbjct: 170 PGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKA------- 220
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSI 425
+ +P S W V P+A LI +L P RI+ Q +
Sbjct: 221 ---------GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKV 261
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 15 TYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK--NREMQI 68
T FSD + K +G G+F +V + +G A K K L + F+ RE +I
Sbjct: 1 TKFSD---NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 57
Query: 69 MRRLEHSNIVKL 80
R+L+H NIV+L
Sbjct: 58 CRKLQHPNIVRL 69
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV----SYI 305
I ++L + H GI HRD+KP N++++ T +K+ DFG A+ + +V + I
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 306 CSRYYRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+ Y +PE G ++D + DV+S GCVL E+L G+P F GDS V
Sbjct: 198 GTAQYLSPEQARGDSVD--ARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ + ++ P + + Y ++ +L Y+H GI +RD+K N+LL+ E G +KL D+G K
Sbjct: 100 HMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE-GHIKLTDYGMCK 158
Query: 294 HLVRGEPNVSYICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+R S C Y APE++ G DY +D W+ G ++ E++ G+ F
Sbjct: 159 EGLRPGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 126 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 182
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N S++ +R Y +PE + G Y+
Sbjct: 126 IMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGT-HYSV 182
Query: 325 KIDVWSAGCVLAELLLGQ-PMFPGDS 349
+ D+WS G L E+ +G+ P+ P D+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ R+L+Y+H G+ HRDIK ++LL + G +KL DFG + + P + Y+
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWM 208
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APE+I + Y T++D+WS G ++ E++ G+P
Sbjct: 209 APEVI-SRLPYGTEVDIWSLGIMVIEMIDGEP 239
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 24 LAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNI 77
LA IG GS GIV A +G+ VA+KK+ D R + R E+ IMR H N+
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 78 VKLKYFFYSSGDK 90
V + Y Y GD+
Sbjct: 105 VDM-YSSYLVGDE 116
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
T+ + L + +H L I HRD+KP+N+LL+ + + KL DFG + L GE S
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLDPGEKLRSVC 184
Query: 306 CSRYYRAPELIFGAID-----YTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE+I +++ Y ++D+WS G ++ LL G P F
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 244 FYTK----LYIYQLFRSLAYIHVLGICHRDIKPQNLLL--NPETGVLKLCDFGSAKHLVR 297
FYT+ I Q+ ++ Y+H +GI HRD+KP+NLL E + + DFG +K +
Sbjct: 116 FYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK 175
Query: 298 GEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
G+ + + Y APE + Y+ +D WS G + LL G P F ++ +I
Sbjct: 176 GDVMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQI 234
Query: 358 IKV-----------LGTPTREQIR---EMNPNYTEFKFPQIKSHPW 389
+K + ++ IR E +PN + Q HPW
Sbjct: 235 LKAEYEFDSPYWDDISDSAKDFIRNLMEKDPN-KRYTCEQAARHPW 279
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK-NREMQIMRRLEHSNIVKLK 81
K +G G+F V A+ +G+L A+K K L+ K E+ ++R+++H NIV L+
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 82 YFFYS 86
+ S
Sbjct: 87 DIYES 91
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV-LGICHRDIKPQNLL 276
+ +E M ++ K K Q P + ++L ++H L + HRD+KP N+L
Sbjct: 127 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 186
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAID---YTTKIDVWSAGC 333
+N G +K+CDFG + +LV + Y APE I ++ Y+ K D+WS G
Sbjct: 187 IN-ALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 245
Query: 334 VLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ EL + + FP DS ++ +V+ P+
Sbjct: 246 TMIELAILR--FPYDSWGTPFQQLKQVVEEPS 275
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK + + YY AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
E + G Y D WS G + LL G P F + G+
Sbjct: 233 E-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYIC-SRYYRA 312
++ ++H I HRD+KP+NLL + VLKL DFG AK + + C + YY A
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVA 197
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREM 372
PE + G Y D+WS G ++ LL G P F ++G + + + +IR
Sbjct: 198 PE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIR-- 246
Query: 373 NPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
++ FP + WS+V DA LI LL+ P+ R++ Q
Sbjct: 247 ---LGQYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQ 284
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 25/168 (14%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ ++H I HRD+KP+NLL + VLKL DFG AK + + YY AP
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAP 179
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
E + G Y D+WS G ++ LL G P F ++G + + + +IR
Sbjct: 180 E-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMKRRIR--- 227
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
++ FP + WS+V DA LI LL+ P+ R++ Q
Sbjct: 228 --LGQYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQ 265
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +K+ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +K+ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 37/197 (18%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLC 287
VA+ Y C I Q+ ++ + H +G+ HR++KP+NLLL + +KL
Sbjct: 102 VAREYYSEADASHC------IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLA 155
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V GE + + Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 156 DFGLAIE-VEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPF 213
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A DLI
Sbjct: 214 -WDEDQHRLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKDLI 248
Query: 406 SRLLEYTPSSRISPLQV 422
+++L PS RI+ +
Sbjct: 249 NKMLTINPSKRITAAEA 265
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 10 FAKNYTYFSDLDNSLAQKTVIGNGSFGIVYQA-KLLDSGELVAI-----KKVLQDKRFKN 63
F + Y F +L G G+F +V + K+L E A+ K +D +
Sbjct: 9 FTEEYQLFEEL----------GKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE 58
Query: 64 REMQIMRRLEHSNIVKL 80
RE +I R L+H NIV+L
Sbjct: 59 REARICRLLKHPNIVRL 75
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ E G +++ DFG AK R +
Sbjct: 129 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAK---RVKGRTWX 184
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 185 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 98/215 (45%), Gaps = 42/215 (19%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
L+LE+ P ++ K KS F T + +L +L Y H + HRDIKP+NLLL
Sbjct: 100 LILEYAPRG--ELYKELQKS-CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLL 156
Query: 278 NPETGVLKLCDFGSAKHLVRGEPNV--SYICSRY-YRAPELIFGAIDYTTKIDVWSAGCV 334
G LK+ DFG + H P++ +C Y PE+I G + + K+D+W G +
Sbjct: 157 G-LKGELKIADFGWSVH----APSLRRKTMCGTLDYLPPEMIEGRM-HNEKVDLWCIGVL 210
Query: 335 LAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFR 394
ELL+G P F S + I+KV + KFP
Sbjct: 211 CYELLVGNPPFESASHNETYRRIVKV-----------------DLKFP------------ 241
Query: 395 VRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
P A DLIS+LL + PS R+ PL S P++
Sbjct: 242 ASVPTGAQDLISKLLRHNPSERL-PLAQVSAHPWV 275
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIVKLKY 82
+G G FG VY A+ S +VA+K + + + K RE++I L H NI++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 83 FFY 85
+FY
Sbjct: 91 YFY 93
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ Q+ ++ Y H I HRD+KP+NLLL+ V K+ DFG + + G + S
Sbjct: 113 FFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNV-KIADFGLSNIMTDGNFLKTSCGSP 171
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
Y APE+I G + ++DVWS G VL +L+G+
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG---VLKLCDFGSAKHLVRGEPNVSYI- 305
++ + +++ Y+H G+ HRD+KP N+L E+G L++CDFG AK L R E +
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTP 185
Query: 306 C-SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLG-QPMFPGDSGVDQLVEIIKVLGT 363
C + + APE + Y D+WS G +L +L G P G S D EI+ +G+
Sbjct: 186 CYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGS 242
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
KF + W+ V A DL+S++L P R++ QV
Sbjct: 243 G---------------KFT-LSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQV 280
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
T+ + L + +H L I HRD+KP+N+LL+ + + KL DFG + L GE
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLDPGEKLREVC 184
Query: 306 CSRYYRAPELIFGAID-----YTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE+I +++ Y ++D+WS G ++ LL G P F
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
T+ + L + +H L I HRD+KP+N+LL+ + + KL DFG + L GE
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLDPGEKLREVC 171
Query: 306 CSRYYRAPELIFGAID-----YTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE+I +++ Y ++D+WS G ++ LL G P F
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSY 304
T++ Q+ ++AY+H G HRD+KP+NLL + E LKL DFG AK + ++
Sbjct: 110 TRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 305 IC-SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
C S Y APELI G ++ DVWS G +L L+ G F D+
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG---VLKLCDFGSAKHLVRGEPNVSYIC 306
++ + +++ Y+H G+ HRD+KP N+L E+G L++CDFG AK L + C
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 307 -SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLG-QPMFPGDSGVDQLVEIIKVLGTP 364
+ + APE + Y D+WS G +L +L G P G S D EI+ +G+
Sbjct: 187 YTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG 243
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
KF + W+ V A DL+S++L P R++ QV
Sbjct: 244 ---------------KF-TLSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTAKQV 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + +CHRD+K +N LL+ LK+C FG +K V S
Sbjct: 117 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST 176
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y K+ DVWS G L +L+G F + I
Sbjct: 177 VGTPAYIAPEVLLKK-EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH---- 231
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
R +N Y + V P+ LISR+ P+ RIS ++R
Sbjct: 232 ------RILNVQYAIPDY-------------VHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 424 SITPFLIELRAVFEN 438
+ FL L A N
Sbjct: 273 NHEWFLKNLPADLMN 287
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN---REMQIMRRLEHSNIVKLK 81
IG+G+FG+ + S ELVA+K + + ++ RE+ R L H NIV+ K
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 241 FPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE- 299
F F + ++ + L Y+H HRDIK N+LL+ E G +KL DFG A L +
Sbjct: 117 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQI 175
Query: 300 PNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
+++ + ++ APE+I + Y +K D+WS G EL G+P
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEP 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 238 KQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGV--LKLCDFGSAKHL 295
+++F + + + +L ++H GI HRD+KP+N+L V +K+CDFG +
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI 164
Query: 296 -VRGE------PNVSYIC-SRYYRAPELIFG----AIDYTTKIDVWSAGCVLAELLLGQP 343
+ G+ P + C S Y APE++ A Y + D+WS G +L LL G P
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 344 MFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAID 403
F G G D + + P + + + +++FP W+ + A D
Sbjct: 225 PFVGRCGSDCGWD--RGEACPACQNMLFESIQEGKYEFP---DKDWAHI-----SCAAKD 274
Query: 404 LISRLLEYTPSSRISPLQV 422
LIS+LL R+S QV
Sbjct: 275 LISKLLVRDAKQRLSAAQV 293
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +K+ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGLAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK-HLVRGEPNVSYIC 306
Y ++ L ++H GI +RD+K N++L+ E G +K+ DFG K H++ G +
Sbjct: 124 FYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMMDGVTTREFCG 182
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ Y APE+I Y +D W+ G +L E+L GQP F G+ D+L + I
Sbjct: 183 TPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS--YICSRY 309
Q+ + + H + I HRDIKPQN+L++ LK+ DFG AK L + + +
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDS-NKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 310 YRAPELIFG-AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
Y +PE G A D T D++S G VL E+L+G+P F G++ V
Sbjct: 178 YFSPEQAKGEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 190
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 191 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 244 FYTKL----YIYQLFRSLAYIHVLGICHRDIKPQNLL---LNPETGVLKLCDFGSAKHLV 296
FYT+ I+Q+ ++ Y+H LGI HRD+KP+NLL L+ ++ ++ + DFG +K
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED 170
Query: 297 RGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
G + + Y APE + Y+ +D WS G + LL G P F ++ +
Sbjct: 171 PGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 357 IIKV-----------LGTPTREQIREMNPNYTEFKF--PQIKSHPW 389
I+K + ++ IR + E +F Q HPW
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK-NREMQIMRRLEHSNIVKLK 81
+ V+G G+F V A+ + +LVAIK + L+ K E+ ++ +++H NIV L
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 82 YFFYSSG 88
+ S G
Sbjct: 83 DIYESGG 89
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 190
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 191 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 137 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 192
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 193 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV-LGICHRDIKPQNLL 276
+ +E M ++ K K Q P + ++L ++H L + HRD+KP N+L
Sbjct: 83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAID---YTTKIDVWSAGC 333
+N G +K+CDFG + +LV + Y APE I ++ Y+ K D+WS G
Sbjct: 143 INA-LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 201
Query: 334 VLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ EL + + FP DS ++ +V+ P+
Sbjct: 202 TMIELAILR--FPYDSWGTPFQQLKQVVEEPS 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADE 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 244 FYTKL----YIYQLFRSLAYIHVLGICHRDIKPQNLL---LNPETGVLKLCDFGSAKHLV 296
FYT+ I+Q+ ++ Y+H LGI HRD+KP+NLL L+ ++ ++ + DFG +K
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED 170
Query: 297 RGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
G + + Y APE + Y+ +D WS G + LL G P F ++ +
Sbjct: 171 PGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 357 IIKV-----------LGTPTREQIREMNPNYTEFKF--PQIKSHPW 389
I+K + ++ IR + E +F Q HPW
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK-NREMQIMRRLEHSNIVKLK 81
+ V+G G+F V A+ + +LVAIK + L+ K E+ ++ +++H NIV L
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 82 YFFYSSG 88
+ S G
Sbjct: 83 DIYESGG 89
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 244 FYTKL----YIYQLFRSLAYIHVLGICHRDIKPQNLL---LNPETGVLKLCDFGSAKHLV 296
FYT+ I+Q+ ++ Y+H LGI HRD+KP+NLL L+ ++ ++ + DFG +K
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED 170
Query: 297 RGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
G + + Y APE + Y+ +D WS G + LL G P F ++ +
Sbjct: 171 PGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 357 IIKV-----------LGTPTREQIREMNPNYTEFKF--PQIKSHPW 389
I+K + ++ IR + E +F Q HPW
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK-NREMQIMRRLEHSNIVKLK 81
+ V+G G+F V A+ + +LVAIK K L+ K E+ ++ +++H NIV L
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 82 YFFYSSG 88
+ S G
Sbjct: 83 DIYESGG 89
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + Y H + HRD+KP+N+LL+ K+ DFG + + GE S Y
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCGSPNYA 182
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
APE+I G + ++D+WS+G +L LL G F D
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 230 VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLC 287
VA+ Y C I Q+ ++ + H +G+ HRD+KP+NLLL + +KL
Sbjct: 95 VAREYYSEADASHC------IQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 288 DFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
DFG A V+G+ + + Y +PE++ Y +D+W+ G +L LL+G P F
Sbjct: 149 DFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLRKEA-YGKPVDIWACGVILYILLVGYPPF 206
Query: 346 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLI 405
D +L + IK + FP S W V P+A +LI
Sbjct: 207 -WDEDQHKLYQQIKA----------------GAYDFP---SPEWDTV-----TPEAKNLI 241
Query: 406 SRLLEYTPSSRISP 419
+++L P+ RI+
Sbjct: 242 NQMLTINPAKRITA 255
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKL 80
IG G+F +V + L +G A K + +D + RE +I R L+HSNIV+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 218
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 219 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 128 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWT 183
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 184 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFADQ 228
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 218
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 219 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGRTWT-- 198
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 244 FYTKL----YIYQLFRSLAYIHVLGICHRDIKPQNLL---LNPETGVLKLCDFGSAKHLV 296
FYT+ I+Q+ ++ Y+H LGI HRD+KP+NLL L+ ++ ++ + DFG +K
Sbjct: 112 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED 170
Query: 297 RGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
G + + Y APE + Y+ +D WS G + LL G P F ++ +
Sbjct: 171 PGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 357 IIKV-----------LGTPTREQIREMNPNYTEFKF--PQIKSHPW 389
I+K + ++ IR + E +F Q HPW
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIK----KVLQDKRFK-NREMQIMRRLEHSNIVKLK 81
+ V+G G+F V A+ + +LVAIK + L+ K E+ ++ +++H NIV L
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 82 YFFYSSG 88
+ S G
Sbjct: 83 DIYESGG 89
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK R +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK---RVKGRTWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKG-ATWTL 219
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+ Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 220 CGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ + Q+ ++ + H G+ HRDIK +N+L++ G KL DFGS L+ EP +
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGA-LLHDEPYTDFD 199
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+R Y PE I + VWS G +L +++ G F D EI++
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILE------ 247
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E FP S PD LI R L PSSR S
Sbjct: 248 -----------AELHFPAHVS------------PDCCALIRRCLAPKPSSRPS 277
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
I HRD+KP N+L+N G +KLCDFG + L+ N ++ +R Y +PE + G Y+
Sbjct: 129 IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQGT-HYSV 185
Query: 325 KIDVWSAGCVLAELLLGQ 342
+ D+WS G L E+ +G+
Sbjct: 186 QSDIWSMGLSLVEMAVGR 203
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 263
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCW 288
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 264 GICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIF----GA 319
G+ HRD+KP N+LL+ E G +KLCDFG + LV + Y APE I
Sbjct: 145 GVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 320 IDYTTKIDVWSAGCVLAELLLGQPMFP 346
DY + DVWS G L EL GQ FP
Sbjct: 204 PDYDIRADVWSLGISLVELATGQ--FP 228
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ Q+ ++ Y H I HRD+KP+NLLL+ V K+ DFG + + G + S
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV-KIADFGLSNIMTDGNFLKTSCGSP 176
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ 368
Y APE+I G + ++DVWS G +L +L + F +S I VL
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-- 226
Query: 369 IREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPF 428
N YT KF P A LI R+L P +RIS ++ F
Sbjct: 227 ----NGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
Query: 429 LIEL 432
++L
Sbjct: 268 KVDL 271
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAI----KKVLQDKRFKN---REMQIMRRLEHSNIVKLKY 82
+G GSFG V A +G+ VA+ KKVL + RE+ +R L H +I+KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL-- 79
Query: 83 FFYSSGDKKDE 93
Y KDE
Sbjct: 80 --YDVIKSKDE 88
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 263
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCW 288
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 254
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCW 279
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 263
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCW 288
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR-------------G 298
Q+ +L+YIH GI HRD+KP N+ ++ V K+ DFG AK++ R G
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNV-KIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 299 EPN--VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
+ S I + Y A E++ G Y KID++S G + E++ +P +G+++ V
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMER-VN 236
Query: 357 IIKVLGTPTRE 367
I+K L + + E
Sbjct: 237 ILKKLRSVSIE 247
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + +CHRD+K +N LL+ LK+C FG +K V
Sbjct: 117 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT 176
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y K+ DVWS G L +L+G F + I
Sbjct: 177 VGTPAYIAPEVLLKK-EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH---- 231
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
R +N Y + V P+ LISR+ P+ RIS ++R
Sbjct: 232 ------RILNVQYAIPDY-------------VHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 424 SITPFLIELRAVFEN 438
+ FL L A N
Sbjct: 273 NHEWFLKNLPADLMN 287
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN---REMQIMRRLEHSNIVKLK 81
IG+G+FG+ + S ELVA+K + + ++ RE+ R L H NIV+ K
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 249 YIY-QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
YI+ QL ++ Y+ + I HRDIK +N+++ E +KL DFGSA +L RG+ ++ +
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGT 192
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVD-----------QLV 355
Y APE++ G ++++WS G L L+ + P + V+ +L+
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELM 252
Query: 356 EIIKVLGTPTREQIREMNPNYTEFKFPQ---IKSHPWSKVFRVRTPPDAI 402
++ L P E+ + T+ Q + + W +VFRV P +
Sbjct: 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGV 302
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKRFKN-------REMQIMRRLEHSNI 77
+G+G+FG V+ A + + V +K KVL+D ++ E+ I+ R+EH+NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 78 VKLKYFFYSSG 88
+K+ F + G
Sbjct: 92 IKVLDIFENQG 102
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR-TWXL 198
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+ Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 AGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIQVTDFGLAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 254
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCW 279
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR-------------G 298
Q+ +L+YIH GI HRD+KP N+ ++ V K+ DFG AK++ R G
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNV-KIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 299 EPN--VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
+ S I + Y A E++ G Y KID++S G + E++ +P +G+++ V
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMER-VN 236
Query: 357 IIKVLGTPTRE 367
I+K L + + E
Sbjct: 237 ILKKLRSVSIE 247
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR-TWXL 198
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+ Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 199 XGTPEYLAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ Q+ ++ Y H I HRD+KP+NLLL+ V K+ DFG + + G + S
Sbjct: 108 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV-KIADFGLSNIMTDGNFLKTSCGSP 166
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ 368
Y APE+I G + ++DVWS G +L +L + F +S I VL
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-- 216
Query: 369 IREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPF 428
N YT KF P A LI R+L P +RIS ++ F
Sbjct: 217 ----NGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
Query: 429 LIEL 432
++L
Sbjct: 258 KVDL 261
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAI----KKVLQDKRFKN---REMQIMRRLEHSNIVKLKY 82
+G GSFG V A +G+ VA+ KKVL + RE+ +R L H +I+KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL-- 69
Query: 83 FFYSSGDKKDE 93
Y KDE
Sbjct: 70 --YDVIKSKDE 78
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ Q+ ++ Y H I HRD+KP+NLLL+ V K+ DFG + + G + S
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV-KIADFGLSNIMTDGNFLKTSCGSP 175
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ 368
Y APE+I G + ++DVWS G +L +L + F +S I VL
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-- 225
Query: 369 IREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPF 428
N YT KF P A LI R+L P +RIS ++ F
Sbjct: 226 ----NGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
Query: 429 LIEL 432
++L
Sbjct: 267 KVDL 270
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAI----KKVLQDKRFKN---REMQIMRRLEHSNIVKLKY 82
+G GSFG V A +G+ VA+ KKVL + RE+ +R L H +I+KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL-- 78
Query: 83 FFYSSGDKKDE 93
Y KDE
Sbjct: 79 --YDVIKSKDE 87
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 264 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 315
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCW 340
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 263
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCW 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 262 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 313
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCW 338
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NL+++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPEIIISK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+++Q+ + Y+H GI HRD+ NLLL + K+ DFG A L +C
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNI-KIADFGLATQLKMPHEKHYTLCGT 175
Query: 309 -YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y +PE+ + + + DVWS GC+ LL+G+P F D+ + L +++
Sbjct: 176 PNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--------- 225
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+++ P S +A DLI +LL P+ R+S
Sbjct: 226 --------LADYEMPSFLS------------IEAKDLIHQLLRRNPADRLS 256
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 28 TVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFK-------NREMQIMRRLEHSNIVKL 80
++G GSF VY+A+ + +G VAIK + + +K E++I +L+H +I++L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 81 KYFFYSS 87
+F S
Sbjct: 77 YNYFEDS 83
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y APE+I Y +D W+ G ++ ++ G P F D
Sbjct: 198 LCGTPEYLAPEIILSK-GYNKAVDWWALGVLIYQMAAGYPPFFAD 241
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE-PNVSYICSRYY 310
++ + L Y+H HRDIK N+LL+ E G +KL DFG A L + +++ + ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APE+I + Y +K D+WS G EL G+P
Sbjct: 171 MAPEVIKQSA-YDSKADIWSLGITAIELARGEP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ Q+ ++ Y H I HRD+KP+NLLL+ V K+ DFG + + G + S
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNV-KIADFGLSNIMTDGNFLKTSCGSP 170
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQ 368
Y APE+I G + ++DVWS G +L +L + F +S I VL
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-- 220
Query: 369 IREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPF 428
N YT KF P A LI R+L P +RIS ++ F
Sbjct: 221 ----NGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
Query: 429 LIEL 432
++L
Sbjct: 262 KVDL 265
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAI----KKVLQDKRFKN---REMQIMRRLEHSNIVKLKY 82
+G GSFG V A +G+ VA+ KKVL + RE+ +R L H +I+KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL-- 73
Query: 83 FFYSSGDKKDE 93
Y KDE
Sbjct: 74 --YDVIKSKDE 82
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 255 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 306
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCW 331
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE-PNVSYICSRYY 310
++ + L Y+H HRDIK N+LL+ E G +KL DFG A L + +++ + ++
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 190
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APE+I + Y +K D+WS G EL G+P
Sbjct: 191 MAPEVIKQSA-YDSKADIWSLGITAIELARGEP 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 257 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 308
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCW 333
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 233 HYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA 292
H KS++ F + Y ++ +L ++H GI +RD+K N+LL+ E G KL DFG
Sbjct: 114 HIQKSRR-FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE-GHCKLADFGMC 171
Query: 293 KH-LVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
K + G ++ + Y APE I + Y +D W+ G +L E+L G F ++
Sbjct: 172 KEGICNGVTTATFCGTPDYIAPE-ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-E 229
Query: 352 DQLVEII 358
D L E I
Sbjct: 230 DDLFEAI 236
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 27/39 (69%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQ 67
V+G GSFG V A++ ++G+L A+K + +D ++ +++
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVE 68
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
Y + FP Y ++ L +H I +RD+KP+N+LL+ + G +++ D G A
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAV 334
Query: 294 HLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ 353
H+ G+ + + Y APE++ YT D W+ GC+L E++ GQ F +
Sbjct: 335 HVPEGQTIKGRVGTVGYMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 354 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTP 413
E+ ++ ++E+ Y+E R P A L S+LL P
Sbjct: 394 REEVERL--------VKEVPEEYSE-----------------RFSPQARSLCSQLLCKDP 428
Query: 414 SSRIS 418
+ R+
Sbjct: 429 AERLG 433
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 263
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCW 288
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H + HRD+KP+N+LL+ K+ DFG + + GE + S Y
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLG 341
APE+I G + ++D+WS G +L LL G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 214 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 265
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 266 LKEGTRMRAPDYTTPEMYQTMLDCW 290
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 254
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCW 279
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 208 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 259
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCW 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 249 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 300
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTMLDCW 325
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE-PNVSYICSR 308
+ ++ + L Y+H HRDIK N+LL+ E G +KL DFG A L + ++ +
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTP 183
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
++ APE+I + Y +K D+WS G EL G+P
Sbjct: 184 FWMAPEVIKQSA-YDSKADIWSLGITAIELARGEP 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+CDFG A+ + + V +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRR 254
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCW 279
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 256 SLAYIHVLGICHRDIKPQNLLL--NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+L Y+H I HRD+KP+N++L P+ + K+ D G AK L +GE ++ + Y AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLG-QPMFP 346
EL+ YT +D WS G + E + G +P P
Sbjct: 194 ELLEQK-KYTVTVDYWSFGTLAFECITGFRPFLP 226
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIVKLK 81
K +G G FG V + D+GE VAIK+ Q+ KNR E+QIM++L H N+V +
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 82 YFFYSSGDKKDEPTNYPPL 100
G +K P + P L
Sbjct: 80 EV--PDGLQKLAPNDLPLL 96
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 256 SLAYIHVLGICHRDIKPQNLLL--NPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
+L Y+H I HRD+KP+N++L P+ + K+ D G AK L +GE ++ + Y AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLG-QPMFP 346
EL+ YT +D WS G + E + G +P P
Sbjct: 193 ELLEQK-KYTVTVDYWSFGTLAFECITGFRPFLP 225
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIVKLK 81
K +G G FG V + D+GE VAIK+ Q+ KNR E+QIM++L H N+V +
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 82 YFFYSSGDKKDEPTNYPPL 100
G +K P + P L
Sbjct: 79 EV--PDGLQKLAPNDLPLL 95
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 247 KLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
KL+I +L +L Y+ I HRD+KP N+LL+ E G + + DF A L R +
Sbjct: 118 KLFICELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMAG 176
Query: 307 SRYYRAPELIFG--AIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
++ Y APE+ Y+ +D WS G ELL G+ + S EI+ T
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFET- 234
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRS 424
T +P WS+ + + L+ +LLE P R S L
Sbjct: 235 ------------TVVTYPS----AWSQ--------EMVSLLKKLLEPNPDQRFSQLSDVQ 270
Query: 425 ITPFL--IELRAVFE 437
P++ I AVF+
Sbjct: 271 NFPYMNDINWDAVFQ 285
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKRFKN--REMQIMRRLEHSNIVKLK 81
IG GSFG V + D+ ++ A+K K ++ +N +E+QIM+ LEH +V L
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 82 YFFYSSGD 89
Y F D
Sbjct: 82 YSFQDEED 89
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
Y + FP Y ++ L +H I +RD+KP+N+LL+ + G +++ D G A
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAV 334
Query: 294 HLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ 353
H+ G+ + + Y APE++ YT D W+ GC+L E++ GQ F +
Sbjct: 335 HVPEGQTIKGRVGTVGYMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
Query: 354 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTP 413
E+ ++ ++E+ Y+E R P A L S+LL P
Sbjct: 394 REEVERL--------VKEVPEEYSE-----------------RFSPQARSLCSQLLCKDP 428
Query: 414 SSRIS 418
+ R+
Sbjct: 429 AERLG 433
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + +A++ HRD+ +N+LL + K+CDFG A+H+ V +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G L EL LG +PG + ++IK
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----- 285
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
E R ++P + + I W
Sbjct: 286 --EGFRMLSPEHAPAEMYDIMKTCW 308
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 228 YKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLC 287
Y VA + K K+ F Q+ ++ Y H I HRD+K +NLLL+ + + K+
Sbjct: 96 YLVAHGWMKEKEARAKFR------QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIA 148
Query: 288 DFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPG 347
DFG + G ++ S Y APEL G ++DVWS G +L L+ G F G
Sbjct: 149 DFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
Query: 348 DS 349
+
Sbjct: 209 QN 210
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA+K + DK N RE++IM+ L H NIVKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE-PNVSYICSRYY 310
++ + L Y+H HRDIK N+LL+ E G +KL DFG A L + ++ + ++
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APE+I + Y +K D+WS G EL G+P
Sbjct: 171 MAPEVIKQSA-YDSKADIWSLGITAIELARGEP 202
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H + HRD+KP+N+LL+ K+ DFG + + GE S Y
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYA 177
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLG 341
APE+I G + ++D+WS G +L LL G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C Y AP +I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEYLAPAIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 238 KQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGV--LKLCDF--GSAK 293
+++F + + + +L ++H GI HRD+KP+N+L V +K+CDF GS
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164
Query: 294 HLVRGE------PNVSYIC-SRYYRAPELIFG----AIDYTTKIDVWSAGCVLAELLLGQ 342
L G+ P + C S Y APE++ A Y + D+WS G +L LL G
Sbjct: 165 KL-NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
P F G G D + + P + + + +++FP W+ + A
Sbjct: 224 PPFVGRCGSDCGWD--RGEACPACQNMLFESIQEGKYEFP---DKDWAHISCA-----AK 273
Query: 403 DLISRLLEYTPSSRISPLQV 422
DLIS+LL R+S QV
Sbjct: 274 DLISKLLVRDAKQRLSAAQV 293
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 174
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 234
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 235 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRG-EPNVSYICS 307
+ Q+ +L ++H I HRDIK QN+ L + G ++L DFG A+ L E + I +
Sbjct: 130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGT 188
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
YY +PE+ Y K D+W+ GCVL EL + F S + +++II
Sbjct: 189 PYYLSPEICENK-PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV------LQDKRFKNREMQIMRRLEHSNIVKLKYF 83
IG GSFG K + G IK++ +++ RE+ ++ ++H NIV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 84 FYSSG 88
F +G
Sbjct: 92 FEENG 96
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 175
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 236 CQHLIRWCLALRPS-DRPTFEEIQNHPW 262
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 174
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 234
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 235 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL G +KL DFG + + P + Y+
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 314
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
APELI + Y ++D+WS G ++ E++ G+P +
Sbjct: 315 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 215
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 216 SYLVGDE 222
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 170
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 230
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 231 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 259
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 173
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 233
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 234 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 175
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 236 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR--GEPNVSYICSRY 309
++ R L+++H + HRDIK QN+LL E +KL DFG + L R G N ++I + Y
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRN-TFIGTPY 194
Query: 310 YRAPELIFGAID------YTTKIDVWSAGCVLAELLLGQP 343
+ APE+I A D Y K D+WS G E+ G P
Sbjct: 195 WMAPEVI--ACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK--KVLQDKRFK-NREMQIMRRLEHSNIVKLKY 82
++GNG++G VY+ + + +G+L AIK V D+ + +E+ ++++ H + Y
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYY 87
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 170
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + + +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 230
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 231 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 259
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 217
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 277
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 278 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 306
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 175
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 236 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 202
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 263 CQHLIRWCLALRPS-DRPTFEEIQNHPW 289
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 203
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 264 CQHLIRWCLALRPS-DRPTFEEIQNHPW 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 203
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 264 CQHLIRWCLALRPS-DRPTFEEIQNHPW 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 202
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 263 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 291
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 202
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 262
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 263 CQHLIRWCLALRPS-DRPTFEEIQNHPW 289
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 217
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 277
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 278 CQHLIRWCLALRPS-DRPTFEEIQNHPW 304
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG---VLKLCDFGSAKHLVRGEPNVSYI- 305
++ + +++ Y+H G+ HRD+KP N+L E+G +++CDFG AK L R E +
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTP 180
Query: 306 C-SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
C + + APE + Y D+WS G +L +L G F + D EI+ +G+
Sbjct: 181 CYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSG 238
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
KF + W+ V A DL+S++L P R++ V
Sbjct: 239 ---------------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALV 275
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 189
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 249
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 250 CQHLIRWCLALRPS-DRPTFEEIQNHPW 276
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 193 AIDLISRLLEYTPSSRISPL-------------QVFLNLVLEFMPETVYKVAKHYS--KS 237
A+ +IS+ +E I+ L +VF + + F+ + + + K
Sbjct: 40 AVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK 99
Query: 238 KQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVL--KLCDFGSAKHL 295
K++F + +L +++++H +G+ HRD+KP+NLL E L K+ DFG A+
Sbjct: 100 KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
Query: 296 VRGEPNVSYIC-SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS---GV 351
+ C + +Y APEL+ Y D+WS G +L +L GQ F
Sbjct: 160 PPDNQPLKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC 218
Query: 352 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEY 411
VEI+K +I++ +F F + W V + +A DLI LL
Sbjct: 219 TSAVEIMK--------KIKK-----GDFSF---EGEAWKNVSQ-----EAKDLIQGLLTV 257
Query: 412 TPSSRISPLQVR 423
P+ R+ +R
Sbjct: 258 DPNKRLKMSGLR 269
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 190
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 250
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 251 CQHLIRWCLALRPS-DRPTFEEIQNHPW 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ ++ Q + + Y+H + HRD+K NL LN + V K+ DFG A + GE +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV-KIGDFGLATKIEFDGERKKTL 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE++ ++ ++D+WS GC+L LL+G+P F
Sbjct: 203 CGTPNYIAPEVLCKK-GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXF 165
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 166 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 219
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 220 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 249
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXF 165
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 166 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 219
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 220 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 209
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + + +
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 269
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 270 CQHLIRWCLALRPS-DRPTFEEIQNHPW 296
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 112 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXF 170
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 171 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 224
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 225 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 254
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ S Y
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNI-KIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 20 LDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRR 71
+ N QKT IG G+F V A+ + +G VA+K + DK N RE++IM+
Sbjct: 14 IGNYRLQKT-IGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKI 70
Query: 72 LEHSNIVKL 80
L H NIVKL
Sbjct: 71 LNHPNIVKL 79
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA+K + DK N RE++IM+ L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTF 165
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 166 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 219
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 220 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 249
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL G +KL DFG + + P + Y+
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 192
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APELI + Y ++D+WS G ++ E++ G+P
Sbjct: 193 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEP 223
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 93
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 94 SYLVGDE 100
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXF 165
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 166 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 219
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 220 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 249
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA++ + DK N RE++IM+ L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTF 168
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 169 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 222
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 223 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 252
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL G +KL DFG + + P + Y+
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 237
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APELI + Y ++D+WS G ++ E++ G+P
Sbjct: 238 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEP 268
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 138
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 139 SYLVGDE 145
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA+K + DK N RE++IM+ L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 216 LNLVLEFM--PETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQ 273
L+ +L+ M + Y +++H S+ + + Y ++ L ++H + +RD+KP
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIILGLEHMHNRFVVYRDLKPA 321
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGC 333
N+LL+ E G +++ D G A + +P+ S + + Y APE++ + Y + D +S GC
Sbjct: 322 NILLD-EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 334 VLAELLLGQPMF 345
+L +LL G F
Sbjct: 380 MLFKLLRGHSPF 391
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIM 69
N + +IG G FG VY + D+G++ A+ K L KR K ++ + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETL 235
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 233 HYSKSKQN-FPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
HY S+ F + Y ++ L ++H + +RD+KP N+LL+ E G +++ D G
Sbjct: 279 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGL 337
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
A + +P+ S + + Y APE++ + Y + D +S GC+L +LL G F
Sbjct: 338 ACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIM 69
N + +IG G FG VY + D+G++ A+ K L KR K ++ + +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETL 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y ++ +L Y+H + +RDIK +NL+L+ + G +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTF 165
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLGT 363
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 166 CGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM--- 219
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ S P+A L++ LL+ P R+
Sbjct: 220 ---EEIR----------FPRTLS------------PEAKSLLAGLLKKDPKQRLG 249
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + GE +
Sbjct: 119 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKTL 177
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 178 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ + Y Q+ + Y+H L + +RD+KP+NLL++ + G +++ DFG AK V+G
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKR-VKGR--TWX 197
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
+C APE+I Y +D W+ G ++ E+ G P F D
Sbjct: 198 LCGTPEALAPEIILSK-GYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + GE +
Sbjct: 119 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKTL 177
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 178 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL G +KL DFG + + P + Y+
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 194
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APELI + Y ++D+WS G ++ E++ G+P
Sbjct: 195 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEP 225
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 95
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 96 SYLVGDE 102
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + GE +
Sbjct: 123 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKTL 181
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 182 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLL-LNP-ETGVLKLCDFGSAKHLVRGEPNVSYI 305
L I Q+ ++ Y+H GI HRD+KP+NLL L P E + + DFG +K G +S
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTA 167
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTP 364
C Y APE + Y+ +D WS G + LL G P F ++ +L E IK
Sbjct: 168 CGTPGYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK----- 220
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSR 416
Y EF+ P F A D I LLE P+ R
Sbjct: 221 ---------EGYYEFESP----------FWDDISESAKDFICHLLEKDPNER 253
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN----REMQIMRRLEHSNIVKLKYFF 84
V+G+G+F V+ K +G+L A+K + + F++ E+ ++++++H NIV L+ +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 85 YSS 87
S+
Sbjct: 76 EST 78
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ S Y
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G VAIK + DK N RE++IM+ L H NIVKL
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 245 YTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE-PNVS 303
Y + ++ + L Y+H HRDIK N+LL+ E G +KL DFG A L +
Sbjct: 117 YIATILREILKGLDYLHSERKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
++ + ++ APE+I + Y K D+WS G EL G+P
Sbjct: 176 FVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEP 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ ++ Q + + Y+H + HRD+K NL LN + V K+ DFG A + GE
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV-KIGDFGLATKIEFDGERKKDL 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE++ ++ ++D+WS GC+L LL+G+P F
Sbjct: 203 CGTPNYIAPEVLCKK-GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 170
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 230
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 231 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 259
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL + G +KL DFG + + P + Y+
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 187
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APELI + Y ++D+WS G ++ E++ G+P
Sbjct: 188 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEP 218
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 88
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 89 SYLVGDE 95
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 203
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 264 CQHLIRWCLALRPS-DRPTFEEIQNHPW 290
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 233 HYSKSKQN-FPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
HY S+ F + Y ++ L ++H + +RD+KP N+LL+ E G +++ D G
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGL 338
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
A + +P+ S + + Y APE++ + Y + D +S GC+L +LL G F
Sbjct: 339 ACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIM 69
N + +IG G FG VY + D+G++ A+ K L KR K ++ + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETL 235
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 233 HYSKSKQN-FPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
HY S+ F + Y ++ L ++H + +RD+KP N+LL+ E G +++ D G
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGL 338
Query: 292 AKHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
A + +P+ S + + Y APE++ + Y + D +S GC+L +LL G F
Sbjct: 339 ACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIM 69
N + +IG G FG VY + D+G++ A+ K L KR K ++ + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETL 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 202
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + +
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 262
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 263 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 203
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-VDQLVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + V + +
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 264 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 292
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 253 LFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YYR 311
+ ++L+ +H G+ HRDIK ++LL + G +KL DFG + + P + Y+
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWM 183
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
APELI + Y ++D+WS G ++ E++ G+P
Sbjct: 184 APELI-SRLPYGPEVDIWSLGIMVIEMVDGEP 214
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
IG GS GIV A + SG+LVA+KK+ D R + R E+ IMR +H N+V++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEM-YN 84
Query: 84 FYSSGDK 90
Y GD+
Sbjct: 85 SYLVGDE 91
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ ++ Q + + Y+H + HRD+K NL LN + V K+ DFG A + GE
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV-KIGDFGLATKIEFDGERKKDL 186
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE++ ++ ++D+WS GC+L LL+G+P F
Sbjct: 187 CGTPNYIAPEVLCKK-GHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G + S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA++ + DK N RE++IM+ L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL-VRGEPNVSY 304
+ ++ Q + + Y+H + HRD+K NL LN + V K+ DFG A + GE
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDV-KIGDFGLATKIEFDGERKKXL 202
Query: 305 ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ Y APE++ ++ ++D+WS GC+L LL+G+P F
Sbjct: 203 CGTPNYIAPEVLCKK-GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 217
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 277
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 278 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 306
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 189
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 249
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 250 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 278
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 222
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 223 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 282
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 283 CQHLIRWCLALRPS-DRPTFEEIQNHPW 309
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 22/143 (15%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVL---GICHRDIKPQN 274
LV+E+ H ++ + + + Q + +AY+H + + HRD+KP N
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 275 LLLNPETGVLKLCDFGSA----KHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWS 330
LLL VLK+CDFG+A H+ + + +++ APE +F +Y+ K DV+S
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM------APE-VFEGSNYSEKCDVFS 189
Query: 331 AGCVLAELL--------LGQPMF 345
G +L E++ +G P F
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAF 212
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--REMQIMRRLEHSNIVKL 80
+ V+G G+FG+V +AK + VAIK++ + K E++ + R+ H NIVKL
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 67
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 197
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 198 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 257
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPWSK 391
+ IR + P+ F +I++HPW +
Sbjct: 258 CQHLIRWCLALRPS-DRPTFEEIQNHPWMQ 286
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 190
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQ-LVEIIKVLGTP 364
+R Y PE I + VWS G +L +++ G F D + + V + +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 250
Query: 365 TREQIR---EMNPNYTEFKFPQIKSHPW 389
+ IR + P+ F +I++HPW
Sbjct: 251 CQHLIRWCLALRPS-DRPTFEEIQNHPW 277
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPET--GVLKLCDFGSAKHLVRGEPNVSYICS 307
+ Q+ ++AY+H GI HRD+KP+NLL LK+ DFG +K +V + + +C
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK-IVEHQVLMKTVCG 212
Query: 308 R-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLV 355
Y APE++ G Y ++D+WS G + LL G F + G DQ +
Sbjct: 213 TPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM 259
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIK--KVLQDKRFKNREMQIMRRLEHSNIVKLKYFFYSS 87
+G G+ IVY+ K + + A+K K DK+ E+ ++ RL H NI+KLK F
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF--- 117
Query: 88 GDKKDEPTNYPPLEDMKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGVDQLV 147
+ PT + ++ T G+ DR E Y + R + V Q++
Sbjct: 118 ----ETPTEISLVLEL---------------VTGGELFDRIVEKGYYSERDAADAVKQIL 158
Query: 148 EIIKVL 153
E + L
Sbjct: 159 EAVAYL 164
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG-VLKLCDFGSAKHLVRGEPNVSY 304
+ + QL ++Y H + + HRD+K +N LL+ LK+ DFG +K V S
Sbjct: 117 ARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA 176
Query: 305 ICSRYYRAPELIFGAIDYTTKI-DVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
+ + Y APE++ +Y K+ DVWS G L +L+G F + I
Sbjct: 177 VGTPAYIAPEVLLKK-EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH---- 231
Query: 364 PTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVR 423
R +N Y + V P+ LISR+ P+ RIS ++R
Sbjct: 232 ------RILNVQYAIPDY-------------VHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 424 SITPFLIELRAVFEN 438
+ FL L A N
Sbjct: 273 NHEWFLKNLPADLMN 287
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN---REMQIMRRLEHSNIVKLK 81
IG G+FG+ + + ELVA+K + + ++ RE+ R L H NIV+ K
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVL---GICHRDIKPQN 274
LV+E+ H ++ + + + Q + +AY+H + + HRD+KP N
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 275 LLLNPETGVLKLCDFGSA----KHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWS 330
LLL VLK+CDFG+A H+ + + +++ APE +F +Y+ K DV+S
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM------APE-VFEGSNYSEKCDVFS 188
Query: 331 AGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWS 390
G +L E++ + F G I+ + TR + + P E + + WS
Sbjct: 189 WGIILWEVITRRKPFDEIGG--PAFRIMWAVHNGTRPPLIKNLPKPIE----SLMTRCWS 242
Query: 391 KVFRVR-TPPDAIDLISRLLEYTPSSRISPLQ 421
K R + + + +++ L+ Y P + PLQ
Sbjct: 243 KDPSQRPSMEEIVKIMTHLMRYFPGAD-EPLQ 273
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--REMQIMRRLEHSNIVKL 80
+ V+G G+FG+V +AK + VAIK++ + K E++ + R+ H NIVKL
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 66
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNI-KIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA+K + DK N RE++I + L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ + +Q+ ++ + H G+ HRDIK +N+L++ G LKL DFGS L++ +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA-LLKDTVYTDFD 190
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+R Y PE I + VWS G +L +++ G F D +
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 254 FRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS-YICSRYYRA 312
+ L Y+H + HRDIK N+LLN E G KL DFG A L + I + ++ A
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLNTE-GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
PE+I I Y D+WS G E+ G+P
Sbjct: 194 PEVI-QEIGYNCVADIWSLGITAIEMAEGKP 223
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--REMQIMRRLEHSNIVKLKYFFYSS 87
+G GS+G VY+A ++G++VAIK+V + + +E+ IM++ + ++VK ++ +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 88 GD 89
D
Sbjct: 97 TD 98
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G+ VA+K + DK N RE++IM+ L H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + +
Sbjct: 141 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKVL 199
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
C Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 200 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSYICSRYY 310
Q+ +L ++H I HRD+K N+L+ E G ++L DFG SAK+L + S+I + Y+
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 311 RAPELIFGA----IDYTTKIDVWSAGCVLAELLLGQP 343
APE++ Y K D+WS G L E+ +P
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 19 DLDNSLAQKTV--IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRR 71
DLD + + V +G+G+FG VY+AK ++G L A KV++ K + E++I+
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAA-AKVIETKSEEELEDYIVEIEILAT 72
Query: 72 LEHSNIVKLKYFFYSSG 88
+H IVKL +Y G
Sbjct: 73 CDHPYIVKLLGAYYHDG 89
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + +
Sbjct: 143 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKVL 201
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
C Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 202 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCF----YTKLYIYQLFRSLAYIH-VLGICHRDIK 271
++ E+M +++ K +++ +N+ CF K I + S +YIH ICHRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 272 PQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAIDYT-TKIDVWS 330
P N+L++ + G +KL DFG ++++V + S + + PE Y K+D+WS
Sbjct: 180 PSNILMD-KNGRVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 331 AGCVL 335
G L
Sbjct: 238 LGICL 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+ Y+ Q+ Y+H + HRD+K NL LN + V K+ DFG A + +
Sbjct: 117 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEV-KIGDFGLATKVEYDGERKKVL 175
Query: 306 CSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
C Y APE + ++ ++DVWS GC++ LL+G+P F
Sbjct: 176 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSYICSRYY 310
Q+ +L ++H I HRD+K N+L+ E G ++L DFG SAK+L + S+I + Y+
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYW 175
Query: 311 RAPELIFGA----IDYTTKIDVWSAGCVLAELLLGQP 343
APE++ Y K D+WS G L E+ +P
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 19 DLDNSLAQKTV--IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRR 71
DLD + + V +G+G+FG VY+AK ++G L A KV++ K + E++I+
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAA-AKVIETKSEEELEDYIVEIEILAT 64
Query: 72 LEHSNIVKLKYFFYSSG 88
+H IVKL +Y G
Sbjct: 65 CDHPYIVKLLGAYYHDG 81
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 246 TKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS-Y 304
+ Y L + + Y+H I HRDIKP NLL+ E G +K+ DFG + + +S
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG-EDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 305 ICSRYYRAPELIFGAIDYTTKI------DVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ + + APE ++ T KI DVW+ G L + GQ F + E I
Sbjct: 198 VGTPAFMAPE----SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF--------MDERI 245
Query: 359 KVLGTPTREQIREM--NPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSR 416
L + + Q E P+ E D DLI+R+L+ P SR
Sbjct: 246 MCLHSKIKSQALEFPDQPDIAE---------------------DLKDLITRMLDKNPESR 284
Query: 417 I 417
I
Sbjct: 285 I 285
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ ++ Y H I HRD+K +NLLL+ + + K+ DFG + G ++ + Y
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDS 349
APEL G ++DVWS G +L L+ G F G +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN--------REMQIMRRLEHSNIVKL 80
IG G+F V A+ + +G VAIK + DK N RE++IM+ L H NIVKL
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 42/284 (14%)
Query: 86 SSG-DKKDEPTNYPPLEDMKISTFSPRNKVTTVVATPGQGPDRPQEI-SYTNTRVSDSGV 143
SSG D E + + ++ S R + + + +PG P RP+ + R+S G
Sbjct: 8 SSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGH 67
Query: 144 DQLVEIIKVLGTPTREQIR--EMNPNYTEFKFPQIKSHPWSKVF---RVRTPPDAIDLIS 198
E+ KV ++E R + + + F+ P+ ++ ++V +V P +
Sbjct: 68 GSYGEVFKVR---SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV---- 120
Query: 199 RLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA 258
RL + I LQ L + +H + P Y+ +LA
Sbjct: 121 RLEQAWEEGGILYLQTEL---------CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 259 YIHVLGICHRDIKPQNLLLNPETGVLKLCDFG--------SAKHLVRGEPNVSYICSRYY 310
++H G+ H D+KP N+ L P G KL DFG A + G+P Y
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPR-GRCKLGDFGLLVELGTAGAGEVQEGDPR--------Y 222
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQL 354
APEL+ G+ Y T DV+S G + E+ + G G QL
Sbjct: 223 MAPELLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YY 310
+ ++L ++H + HRDIK N+LL + G +KL DFG + + S + Y+
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
APE++ Y K+D+WS G + E++ G+P + ++ + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 371 EMNPNYTEF 379
+++ + +F
Sbjct: 241 KLSAIFRDF 249
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFKN---REMQIMRRLEHSNIV 78
IG G+ G VY A + +G+ VAI+++ LQ + K E+ +MR ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YY 310
+ ++L ++H + HRDIK N+LL + G +KL DFG + + S + Y+
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
APE++ Y K+D+WS G + E++ G+P + ++ + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 371 EMNPNYTEF 379
+++ + +F
Sbjct: 241 KLSAIFRDF 249
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFKN---REMQIMRRLEHSNIV 78
IG G+ G VY A + +G+ VAI+++ LQ + K E+ +MR ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVS-YICSRYY 310
+ ++L ++H + HRDIK N+LL + G +KL DFG + + S + + Y+
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
APE++ Y K+D+WS G + E++ G+P + ++ + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 371 EMNPNYTEF 379
+++ + +F
Sbjct: 241 KLSAIFRDF 249
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFKN---REMQIMRRLEHSNIV 78
IG G+ G VY A + +G+ VAI+++ LQ + K E+ +MR ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YY 310
+ ++L ++H + HRDIK N+LL + G +KL DFG + + S + Y+
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
APE++ Y K+D+WS G + E++ G+P + ++ + L +I GTP +
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 241
Query: 371 EMNPNYTEF 379
+++ + +F
Sbjct: 242 KLSAIFRDF 250
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFKN---REMQIMRRLEHSNIV 78
IG G+ G VY A + +G+ VAI+++ LQ + K E+ +MR ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETG---VLKLCDFGSAKHLVRGEPNVSYIC 306
++ + +++ Y+H G+ HRD+KP N+L E+G +++CDFG AK L + C
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 307 -SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ + APE + Y D+WS G +L L G F + D EI+ +G+
Sbjct: 182 YTANFVAPE-VLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSG- 238
Query: 366 REQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQV 422
KF + W+ V A DL+S+ L P R++ V
Sbjct: 239 --------------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALV 275
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + +A++ HRD+ +N+LL + K+CDFG A+ + V +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G L EL LG +PG + ++IK
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----- 285
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
E R ++P + + I W
Sbjct: 286 --EGFRMLSPEHAPAEMYDIMKTCW 308
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + +A++ HRD+ +N+LL + K+CDFG A+ + V +R
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G L EL LG +PG + ++IK
Sbjct: 227 LPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----- 280
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
E R ++P + + I W
Sbjct: 281 --EGFRMLSPEHAPAEMYDIMKTCW 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + +A++ HRD+ +N+LL + K+CDFG A+ + V +R
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G L EL LG +PG + ++IK
Sbjct: 225 LPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----- 278
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
E R ++P + + I W
Sbjct: 279 --EGFRMLSPEHAPAEMYDIMKTCW 301
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + +A++ HRD+ +N+LL + K+CDFG A+ + V +R
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G L EL LG +PG + ++IK
Sbjct: 209 LPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK----- 262
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
E R ++P + + I W
Sbjct: 263 --EGFRMLSPEHAPAEMYDIMKTCW 285
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y +Q+ + + ++ HRD+ +N+LL+ E V+K+ DFG A+ + + V +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTP 364
+ APE IF + YT + DVWS G +L E+ LG +PG V+I +
Sbjct: 208 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXRR 259
Query: 365 TREQIREMNPNYTEFKFPQIKSHPW 389
+E R P+YT + Q W
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCW 284
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 253 LFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
+ ++L ++H L + HRD+KP N+L+N G +K CDFG + +LV + Y
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 312 APELIFGAID---YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
APE I ++ Y+ K D+WS G EL + + FP DS ++ +V+ P+
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVVEEPS 258
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y+ Q L Y+H I H D+K N+LL+ + LCDFG A L S +
Sbjct: 190 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 309 Y------YRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
Y + APE++ G K+DVWS+ C++ +L G
Sbjct: 250 YIPGTETHMAPEVVLGR-SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 36/176 (20%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNV---S 303
Y+ Q+ +L Y H I HRD+KP+N+LL + + +KL DFG A L GE +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGG 192
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE-IIKVLG 362
+ + ++ APE++ Y +DVW G +L LL G F G ++L E IIK
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIK--- 246
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+MNP WS + A DL+ R+L P+ RI+
Sbjct: 247 -----GKYKMNPR------------QWSHI-----SESAKDLVRRMLMLDPAERIT 280
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKV----------LQDKRFKNREMQIMRRLEHSNIV 78
VIG G+F +V + ++G+ A+K V L + K RE I L+H +IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 89
Query: 79 KLKYFFYSSG 88
+L + S G
Sbjct: 90 ELLETYSSDG 99
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 22/131 (16%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVR-------------G 298
Q+ +L+YIH GI HR++KP N+ ++ E+ +K+ DFG AK++ R G
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 299 EPN--VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE 356
+ S I + Y A E++ G Y KID +S G + E ++P +G ++ V
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER-VN 236
Query: 357 IIKVLGTPTRE 367
I+K L + + E
Sbjct: 237 ILKKLRSVSIE 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA---------KHLVRGE 299
Y+ Q L Y+H I H D+K N+LL+ + LCDFG A K L+ G+
Sbjct: 171 YLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 300 PNVSYI-CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
YI + + APE++ G K+DVWS+ C++ +L G
Sbjct: 231 ----YIPGTETHMAPEVVLGR-SCDAKVDVWSSCCMMLHMLNG 268
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ YQ+ + + ++ HRD+ +N+L+ V+K+CDFG A+ ++ V +R
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVT-HGKVVKICDFGLARDIMSDSNYVVRGNAR 235
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE +F I YT K DVWS G +L E+ LG +PG
Sbjct: 236 LPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSYICSRYY 310
Q +L Y+H I HRD+K N+L + G +KL DFG SAK+ + S+I + Y+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYW 201
Query: 311 RAPELIFGAID----YTTKIDVWSAGCVLAELLLGQP 343
APE++ Y K DVWS G L E+ +P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
+G+G+FG VY+A+ ++ L A K + D + + E+ I+ +H NIVKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 84 FY 85
FY
Sbjct: 103 FY 104
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSYICSRYY 310
Q +L Y+H I HRD+K N+L + G +KL DFG SAK+ + S+I + Y+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYW 201
Query: 311 RAPELIFGAID----YTTKIDVWSAGCVLAELLLGQP 343
APE++ Y K DVWS G L E+ +P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
+G+G+FG VY+A+ ++ L A K + D + + E+ I+ +H NIVKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 84 FY 85
FY
Sbjct: 103 FY 104
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y+ Q L Y+H I H D+K N+LL+ + LCDFG A L S +
Sbjct: 171 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 309 Y------YRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
Y + APE++ G K+D+WS+ C++ +L G
Sbjct: 231 YIPGTETHMAPEVVMGK-PCDAKVDIWSSCCMMLHMLNG 268
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 235 SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKH 294
SK + P + Y+ ++ ++ +H LG HRDIKP N+LL+ G ++L DFGS
Sbjct: 153 SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD-RCGHIRLADFGSCLK 211
Query: 295 LVRGEPNVSYICSRY---YRAPELIFGAIDYTT------KIDVWSAGCVLAELLLGQPMF 345
L R + V + + Y +PE++ + D W+ G E+ GQ F
Sbjct: 212 L-RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
Query: 346 PGDSGVDQLVEII 358
DS + +I+
Sbjct: 271 YADSTAETYGKIV 283
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y+ Q L Y+H I H D+K N+LL+ + LCDFG A L S +
Sbjct: 169 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 309 Y------YRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
Y + APE++ G K+D+WS+ C++ +L G
Sbjct: 229 YIPGTETHMAPEVVMGK-PCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
Y+ Q L Y+H I H D+K N+LL+ + LCDFG A L S +
Sbjct: 155 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 309 Y------YRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
Y + APE++ G K+D+WS+ C++ +L G
Sbjct: 215 YIPGTETHMAPEVVMGK-PCDAKVDIWSSCCMMLHMLNG 252
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 246 TKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ Y ++ +L Y+H + +RD+K +NL+L+ + G +K+ DFG K ++ +
Sbjct: 253 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKT 311
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLG 362
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 312 FCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-- 366
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ P+A L+S LL+ P R+
Sbjct: 367 ----EEIR----------FPRT------------LGPEAKSLLSGLLKKDPKQRLG 396
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 236 KSKQNFPCFYTKLYIYQLFRSLAYIHVLG--ICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+S+ C YQ R++ ++H I HRD+K +NLLL+ + G +KLCDFGSA
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ-GTIKLCDFGSAT 186
Query: 294 HLVRGEPNVSYICSR--------------YYRAPELI--FGAIDYTTKIDVWSAGCVLAE 337
+ P+ S+ R YR PE+I + K D+W+ GC+L
Sbjct: 187 -TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL 245
Query: 338 LLLGQPMF 345
L Q F
Sbjct: 246 LCFRQHPF 253
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR----EMQIMRRLE-HSNIVKLK 81
+ V+ G F VY+A+ + SG A+K++L ++ KNR E+ M++L H NIV+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 82 YFFYSSGDKKDEPTNYPPLEDMKISTFSPRNKVTTVVATPGQGP 125
F S+ E ++ E + ++ V + +GP
Sbjct: 91 --FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 246 TKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ Y ++ +L Y+H + +RD+K +NL+L+ + G +K+ DFG K ++ +
Sbjct: 250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKT 308
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLG 362
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 309 FCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-- 363
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ P+A L+S LL+ P R+
Sbjct: 364 ----EEIR----------FPRT------------LGPEAKSLLSGLLKKDPKQRLG 393
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-YY 310
+ ++L ++H + HR+IK N+LL + G +KL DFG + + S + Y+
Sbjct: 125 ECLQALEFLHSNQVIHRNIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIR 370
APE++ Y K+D+WS G + E++ G+P + ++ + L +I GTP +
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 241
Query: 371 EMNPNYTEF 379
+++ + +F
Sbjct: 242 KLSAIFRDF 250
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKV-LQDKRFKN---REMQIMRRLEHSNIV 78
IG G+ G VY A + +G+ VAI+++ LQ + K E+ +MR ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 249 YIYQLFRSLAYIH---VLGICHRDIKPQNLLL--NPETG-----VLKLCDFGSAKHLVRG 298
+ Q+ R + Y+H ++ I HRD+K N+L+ E G +LK+ DFG A+ R
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR- 168
Query: 299 EPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGV 351
+S + + APE+I ++ ++ DVWS G +L ELL G+ F G G+
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 24 LAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQD------KRFKN--REMQIMRRLEHS 75
L + +IG G FG VY+A + G+ VA+K D + +N +E ++ L+H
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 76 NIVKLK 81
NI+ L+
Sbjct: 67 NIIALR 72
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 90/216 (41%), Gaps = 47/216 (21%)
Query: 235 SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA-- 292
SK + P + YI ++ ++ IH L HRDIKP N+LL+ G ++L DFGS
Sbjct: 182 SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV-NGHIRLADFGSCLK 240
Query: 293 --------KHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPM 344
+ G P+ YI +A E G Y + D WS G + E+L G+
Sbjct: 241 MNDDGTVQSSVAVGTPD--YISPEILQAMEDGMGK--YGPECDWWSLGVCMYEMLYGETP 296
Query: 345 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE-FKFPQIKSHPWSKVFRVRTPPDAID 403
F +S V+ +I+ N+ E F+FP SH +A D
Sbjct: 297 FYAESLVETYGKIM----------------NHEERFQFP---SHV------TDVSEEAKD 331
Query: 404 LISRLLEYTPSSRISPLQVRSITPFLIELRAVFENI 439
LI RL+ SR L I F + A FE +
Sbjct: 332 LIQRLI----CSRERRLGQNGIEDF--KKHAFFEGL 361
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 240 NFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL-LNPETGVLKLCDFGSAKHLVRG 298
N T L++ Q+ + ++H + I H D+KP+N+L +N + +K+ DFG A+
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 299 EPNVSYICSRYYRAPELI-FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
E + + APE++ + + + T D+WS G + LL G F GD+ + L I
Sbjct: 243 EKLKVNFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 358 IKVLGTPTREQIREMNPNYTEF 379
+ E+ ++++ EF
Sbjct: 301 LACRWDLEDEEFQDISEEAKEF 322
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV----LQDKRFKNREMQIMRRLEHSNIV 78
++++ ++G G FG V++ + +G +A K + ++DK E+ +M +L+H+N++
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 79 KLKYFFYSSGD 89
+L F S D
Sbjct: 150 QLYDAFESKND 160
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG A+ + + R
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 310 --YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 223 VKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG A+ + + R
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 310 --YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 223 VKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 246 TKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ Y ++ +L Y+H + +RD+K +NL+L+ + G +K+ DFG K ++ +
Sbjct: 110 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKX 168
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLG 362
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 169 FCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-- 223
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ P+A L+S LL+ P R+
Sbjct: 224 ----EEIR----------FPRT------------LGPEAKSLLSGLLKKDPKQRLG 253
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 197 ISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIY-QLFR 255
I RL+ Y R + + +L +L F K K NF L++ + R
Sbjct: 88 ILRLVAYCLRERGAKHEAWL--LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS----------AKHLVRGEPNVSYI 305
L IH G HRD+KP N+LL E G L D GS ++ + + +
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDE-GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 306 CSRYYRAPELI----FGAIDYTTKIDVWSAGCVLAELLLGQ 342
C+ YRAPEL ID T DVWS GCVL ++ G+
Sbjct: 205 CTISYRAPELFSVQSHCVIDERT--DVWSLGCVLYAMMFGE 243
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVL----QDKRFKNREMQIMRRLEHSNIVKL-KYFF 84
+G G F V + L G A+K++L QD+ RE + R H NI++L Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 85 YSSGDKKD 92
G K +
Sbjct: 97 RERGAKHE 104
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 90/216 (41%), Gaps = 47/216 (21%)
Query: 235 SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA-- 292
SK + P + YI ++ ++ IH L HRDIKP N+LL+ G ++L DFGS
Sbjct: 166 SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV-NGHIRLADFGSCLK 224
Query: 293 --------KHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPM 344
+ G P+ YI +A E G Y + D WS G + E+L G+
Sbjct: 225 MNDDGTVQSSVAVGTPD--YISPEILQAMEDGMGK--YGPECDWWSLGVCMYEMLYGETP 280
Query: 345 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE-FKFPQIKSHPWSKVFRVRTPPDAID 403
F +S V+ +I+ N+ E F+FP SH +A D
Sbjct: 281 FYAESLVETYGKIM----------------NHEERFQFP---SHV------TDVSEEAKD 315
Query: 404 LISRLLEYTPSSRISPLQVRSITPFLIELRAVFENI 439
LI RL+ SR L I F + A FE +
Sbjct: 316 LIQRLI----CSRERRLGQNGIEDF--KKHAFFEGL 345
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 246 TKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ Y ++ +L Y+H + +RD+K +NL+L+ + G +K+ DFG K ++ +
Sbjct: 111 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKX 169
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLG 362
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 170 FCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-- 224
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ P+A L+S LL+ P R+
Sbjct: 225 ----EEIR----------FPRT------------LGPEAKSLLSGLLKKDPKQRLG 254
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 246 TKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY 304
+ Y ++ +L Y+H + +RD+K +NL+L+ + G +K+ DFG K ++ +
Sbjct: 112 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKX 170
Query: 305 ICSR-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ-PMFPGDSGVDQLVEIIKVLG 362
C Y APE++ DY +D W G V+ E++ G+ P + D ++L E+I +
Sbjct: 171 FCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-- 225
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
E+IR FP+ P+A L+S LL+ P R+
Sbjct: 226 ----EEIR----------FPRT------------LGPEAKSLLSGLLKKDPKQRLG 255
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 216 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 235 SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKH 294
SK + P + Y+ ++ ++ +H L HRDIKP N+L++ G ++L DFGS
Sbjct: 166 SKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM-NGHIRLADFGSCLK 224
Query: 295 LVRGEPNVSYIC--SRYYRAPELI----FGAIDYTTKIDVWSAGCVLAELLLGQPMFPGD 348
L+ S + + Y +PE++ G Y + D WS G + E+L G+ F +
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 349 SGVDQLVEII 358
S V+ +I+
Sbjct: 285 SLVETYGKIM 294
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKNTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 264
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 265 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 319
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYICSRYYRAPELIFGAIDYT 323
+ HRD+KP N+ L+ + V KL DFG A+ L E ++ + YY +PE + + Y
Sbjct: 137 VLHRDLKPANVFLDGKQNV-KLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-NRMSYN 194
Query: 324 TKIDVWSAGCVLAELLLGQPMF 345
K D+WS GC+L EL P F
Sbjct: 195 EKSDIWSLGCLLYELCALMPPF 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 31/174 (17%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNP-ETGVLKLCDFGSAKHLVRGEPNVSYICS 307
Y++Q+ +L ++H I H DI+P+N++ + +K+ +FG A+ L G+ +
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y APE+ + +T D+WS G ++ LL G F ++ Q++E I
Sbjct: 167 PEYYAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI--------- 215
Query: 368 QIREMNPNYT--EFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISP 419
MN YT E F +I +A+D + RLL SR++
Sbjct: 216 ----MNAEYTFDEEAFKEI-------------SIEAMDFVDRLLVKERKSRMTA 252
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 218 LVLEFMP--ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
++ EFM E KVA ++K ++ Y + Q+ + L ++H H D+KP+N+
Sbjct: 125 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHENNYVHLDLKPENI 180
Query: 276 LLNPE-TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGA-IDYTTKIDVWSAGC 333
+ + + LKL DFG HL + + + APE+ G + Y T D+WS G
Sbjct: 181 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWSVGV 238
Query: 334 VLAELLLGQPMFPGDSGVDQLVEI-----------IKVLGTPTREQIREM---NPNYTEF 379
+ LL G F G++ + L + + ++ IR++ +PN T
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPN-TRM 297
Query: 380 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
Q HPW TP +A S++ PSSR + ++
Sbjct: 298 TIHQALEHPW------LTPGNAPGRDSQI----PSSRYTKIR 329
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVL----QDKRFKNREMQIMRRLEHSNIVKLKYFF 84
+G G+FG+V++ +G A K V+ DK +E+Q M L H +V L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
Y ++ L ++ GI +RD+K N++L+ E G +K+ DFG K + C
Sbjct: 125 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGVTTKXFCG 183
Query: 308 R-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
Y APE+I Y +D W+ G +L E+L GQ F G+ D+L + I
Sbjct: 184 TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG A+ + N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDI----NNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
Y ++ L ++ GI +RD+K N++L+ E G +K+ DFG K + C
Sbjct: 446 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE-GHIKIADFGMCKENIWDGVTTKXFCG 504
Query: 308 R-YYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
Y APE+I Y +D W+ G +L E+L GQ F G+ D+L + I
Sbjct: 505 TPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSR 308
Q R + Y+H I HRD+K N+ L+ E +K+ DFG A R + + S
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 309 YYRAPELIF--GAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I + Y+ + DV++ G VL EL+ GQ + + DQ++E++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K VA+K + Q + FKN E+ ++R+
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 78
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 79 HVNI--LLFMGYST 90
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 207
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 208 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSR 308
Q R + Y+H I HRD+K N+ L+ E +K+ DFG A R + + S
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 309 YYRAPELIF--GAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I + Y+ + DV++ G VL EL+ GQ + + DQ++E++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K VA+K + Q + FKN E+ ++R+
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 78
Query: 74 HSNIVKLKYFFYSSG 88
H NI L + YS+
Sbjct: 79 HVNI--LLFMGYSTA 91
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 210
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 211 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 265
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 218 LVLEFMP--ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
++ EFM E KVA ++K ++ Y + Q+ + L ++H H D+KP+N+
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHENNYVHLDLKPENI 286
Query: 276 LLNPE-TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGA-IDYTTKIDVWSAGC 333
+ + + LKL DFG HL + + + APE+ G + Y T D+WS G
Sbjct: 287 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWSVGV 344
Query: 334 VLAELLLGQPMFPGDSGVDQLVEI-----------IKVLGTPTREQIREM---NPNYTEF 379
+ LL G F G++ + L + + ++ IR++ +PN T
Sbjct: 345 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPN-TRM 403
Query: 380 KFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
Q HPW TP +A S++ PSSR + ++
Sbjct: 404 TIHQALEHPW------LTPGNAPGRDSQI----PSSRYTKIR 435
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVL----QDKRFKNREMQIMRRLEHSNIVKLKYFF 84
+G G+FG+V++ +G A K V+ DK +E+Q M L H +V L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+K+ DFG L R N+ Y
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVT-ENNVMKIADFG----LARDINNIDYYKKTTN 205
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 206 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 260
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG-SAKHLVRGEPNVSYICSRYY 310
Q +L Y+H I HRD+K N+L + G +KL DFG SAK+ + +I + Y+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYW 201
Query: 311 RAPELIFGAID----YTTKIDVWSAGCVLAELLLGQP 343
APE++ Y K DVWS G L E+ +P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLKYF 83
+G+G+FG VY+A+ ++ L A K + D + + E+ I+ +H NIVKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 84 FY 85
FY
Sbjct: 103 FY 104
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 205 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 255
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 257 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 209 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 259
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 208 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 258
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 216 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 216 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 201 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 251
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK---HLVRGEPNVSYICS 307
YQ+ R + Y+ HRD+ +N+L+ E V+K+ DFG A+ H+ + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F I YT + DVWS G +L E+ LG +PG V++L +++K
Sbjct: 216 VKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLK 266
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 251 YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY- 309
YQL R + Y+ HRD+ +N+L+ E V+++ DFG L R N+ Y
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMRIADFG----LARDINNIDYYKKTTN 218
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIK 359
+ APE +F + YT + DVWS G ++ E+ LG +PG V++L +++K
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLK 273
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRG--EPNVSYICSRY 309
Q +L Y+H I HRD+K N+L + G +KL DFG + R + S+I + Y
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 310 YRAPELIFGAID----YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPT 365
+ APE++ Y K DVWS G L E+ +P + + L++I K PT
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS-EPPT 233
Query: 366 REQIREMNPNYTEF 379
Q + N+ +F
Sbjct: 234 LAQPSRWSSNFKDF 247
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 29 VIGN-GSFGIVYQAKLLDSGELVAIKKVLQDKRFKNR------EMQIMRRLEHSNIVKLK 81
+IG G FG VY+A+ ++ L A K + D + + E+ I+ +H NIVKL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 82 YFFY 85
FY
Sbjct: 74 DAFY 77
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFG------SAKHLVRGEPNVS 303
+ ++ L Y+H G HRD+K N+LL E G +++ DFG + + R + +
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
++ + + APE++ Y K D+WS G EL G
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKLK 81
+ VIG+G+ +V A E VAIK++ +K + +E+Q M + H NIV
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS-- 77
Query: 82 YFFYSSGDKKDE 93
+Y+S KDE
Sbjct: 78 --YYTSFVVKDE 87
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q R + Y+H I HRD+K N+ L+ E +K+ DFG A K G + S
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 309 YYRAPELIF--GAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I + Y+ + DV++ G VL EL+ GQ + + DQ++E++
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K VA+K + Q + FKN E+ ++R+
Sbjct: 11 DGQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 66
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 67 HVNI--LLFMGYST 78
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYICSRYYRAPELIFGAIDYT 323
+ HRD+KP N+ L+ + V KL DFG A+ L +++ + YY +PE + + Y
Sbjct: 137 VLHRDLKPANVFLDGKQNV-KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRMSYN 194
Query: 324 TKIDVWSAGCVLAELLLGQPMF 345
K D+WS GC+L EL P F
Sbjct: 195 EKSDIWSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 265 ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYICSRYYRAPELIFGAIDYT 323
+ HRD+KP N+ L+ + V KL DFG A+ L +++ + YY +PE + + Y
Sbjct: 137 VLHRDLKPANVFLDGKQNV-KLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYN 194
Query: 324 TKIDVWSAGCVLAELLLGQPMF 345
K D+WS GC+L EL P F
Sbjct: 195 EKSDIWSLGCLLYELCALMPPF 216
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 102/261 (39%), Gaps = 76/261 (29%)
Query: 167 NYTEFKFPQIKSHPWSKVFRVRTPPD-AIDLISRLLEYTPSSRISPLQVFLNLVLEFMPE 225
+YTE +IK K R P D D++ +L++ S ++ + V + V E +
Sbjct: 69 HYTETALDEIKL---LKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCM--VFEVLGH 123
Query: 226 TVYK--VAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLL----- 277
+ K + +Y Q P K I Q+ + L Y+H I H DIKP+N+L+
Sbjct: 124 HLLKWIIKSNY----QGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDA 179
Query: 278 -----------------------------------------NPETGVLKLCDFGSA---- 292
N + +K+ D G+A
Sbjct: 180 YVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVH 239
Query: 293 KHLVRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG-- 350
KH I +R YR+ E++ GA Y+T D+WS C+ EL G +F SG
Sbjct: 240 KHFTED------IQTRQYRSIEVLIGA-GYSTPADIWSTACMAFELATGDYLFEPHSGED 292
Query: 351 ----VDQLVEIIKVLGTPTRE 367
D + II++LG+ R
Sbjct: 293 YSRDEDHIAHIIELLGSIPRH 313
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRG------EPNVSYI 305
++ L Y+H G HRD+K N+LL E G +++ DFG + L G + +++
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLG 341
+ + APE++ Y K D+WS G EL G
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKLK 81
+ VIG+G+ +V A E VAIK++ +K + +E+Q M + H NIV
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS-- 72
Query: 82 YFFYSSGDKKDE 93
+Y+S KDE
Sbjct: 73 --YYTSFVVKDE 82
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + YIH + HRD+KP N+ L +T +K+ DFG L + Y
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYM 202
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELL 339
+PE I + DY ++D+++ G +LAELL
Sbjct: 203 SPEQI-SSQDYGKEVDLYALGLILAELL 229
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIV 78
+IG+G FG V++AK G+ I++V + RE++ + +L+H NIV
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIV 68
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 51/176 (28%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAP 313
++ Y+H + I HRD+KP+NLL + +LKL DFG AK GE
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-GE-------------- 173
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMN 373
Y D+WS G ++ LL G P F + G+ + + +IR
Sbjct: 174 -------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR--- 215
Query: 374 PNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVRSITPFL 429
+++FP + WS+V + LI LL+ P+ R+ +IT F+
Sbjct: 216 --MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRM------TITEFM 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 16/106 (15%)
Query: 248 LYIY-QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE------- 299
L+I+ Q+ ++ ++H G+ HRD+KP N+ + V+K+ DFG + + E
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 300 PNVSY------ICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
P +Y + ++ Y +PE I G +Y+ K+D++S G +L ELL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN-NYSHKVDIFSLGLILFELL 270
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 28/91 (30%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREM---QIMR------RLEHSNIVKL 80
+G G FG+V++AK AIK++ R NRE+ ++MR +LEH IV
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIV-- 67
Query: 81 KYF----------FYSSGDK---KDEPTNYP 98
+YF + D+ KDE T++P
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWP 98
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLL 277
+V+E++ K +K Q P Y+ ++ +L+Y+H +G+ + D+KP+N++L
Sbjct: 161 IVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML 215
Query: 278 NPETGVLKLCDFGSAKHL-----VRGEPNVSYICSRYYRAPELIFGAIDYTTKIDVWSAG 332
E LKL D G+ + + G P ++APE++ T D+++ G
Sbjct: 216 TEEQ--LKLIDLGAVSRINSFGYLYGTPG--------FQAPEIV--RTGPTVATDIYTVG 263
Query: 333 CVLAELLLGQPMFPGDSGVDQLVEIIKVLGT 363
LA L L P G VD L E VL T
Sbjct: 264 RTLAALTLDLPTRNGRY-VDGLPEDDPVLKT 293
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A
Sbjct: 145 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIAN 202
Query: 294 HLVRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLL 340
+ +V S + + Y PE I + K DVWS GC+L +
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPD 400
G+ F Q++ I L ++PN+ E +FP I D
Sbjct: 263 GKTPF------QQIINQISKLHAI-------IDPNH-EIEFPDIPE------------KD 296
Query: 401 AIDLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 297 LQDVLKCCLKRDPKQRIS 314
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
+I Q+ + Y+H I H D+KP+N++L N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L I V
Sbjct: 180 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 236 KSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL 295
K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A +
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQM 204
Query: 296 VRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLLGQ 342
+V S + + Y PE I + K DVWS GC+L + G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
F Q++ I L ++PN+ E +FP I D
Sbjct: 265 TPF------QQIINQISKLHAI-------IDPNH-EIEFPDI------------PEKDLQ 298
Query: 403 DLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 299 DVLKCCLKRDPKQRIS 314
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYIC 306
Y Q+ L ++H I +RD+KP+N+LL+ + G +++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ + APEL+ G +Y +D ++ G L E++ + F
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 178 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 178 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 236 KSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL 295
K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A +
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQM 204
Query: 296 VRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLLGQ 342
+V S + + Y PE I + K DVWS GC+L + G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
F Q++ I L ++PN+ E +FP I D
Sbjct: 265 TPF------QQIINQISKLHAI-------IDPNH-EIEFPDI------------PEKDLQ 298
Query: 403 DLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 299 DVLKCCLKRDPKQRIS 314
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYIC 306
Y Q+ L ++H I +RD+KP+N+LL+ + G +++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ + APEL+ G +Y +D ++ G L E++ + F
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 48/197 (24%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLL--------NPETGVLKL----CDFGSAKHLVR 297
+ Q+ +A++H L I HRD+KPQN+L+ + +TG L DFG K L
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 298 GEPNVSYIC-----SRYYRAPELIFGAIDYTTK------IDVWSAGCVLAELLLGQPMFP 346
G+ + + +RAPEL+ + + TK ID++S GCV +L
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 347 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKS-HPWSKVFRVRTPPDAIDLI 405
GD + RE N F ++K H S + +A DLI
Sbjct: 241 GD------------------KYSRESNIIRGIFSLDEMKCLHDRSLI------AEATDLI 276
Query: 406 SRLLEYTPSSRISPLQV 422
S+++++ P R + ++V
Sbjct: 277 SQMIDHDPLKRPTAMKV 293
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYIC 306
Y Q+ L ++H I +RD+KP+N+LL+ + G +++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ + APEL+ G +Y +D ++ G L E++ + F
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPAFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A
Sbjct: 117 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIAN 174
Query: 294 HLVRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLL 340
+ +V S + + Y PE I + K DVWS GC+L +
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPD 400
G+ F Q++ I L ++PN+ E +FP I D
Sbjct: 235 GKTPF------QQIINQISKLHAI-------IDPNH-EIEFPDIPE------------KD 268
Query: 401 AIDLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 269 LQDVLKCCLKRDPKQRIS 286
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL---NPETGVLKLCDFGSAKHLVRGEPNVSYI 305
++ Q+ + Y+H L I H D+KP+N++L N +K+ DFG A + G +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 306 CSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKV 360
+ + APE+ ++Y + D+WS G + LL G F GD+ + L + V
Sbjct: 179 GTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A
Sbjct: 101 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIAN 158
Query: 294 HLVRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLL 340
+ +V S + + Y PE I + K DVWS GC+L +
Sbjct: 159 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPD 400
G+ F Q++ I L ++PN+ E +FP I D
Sbjct: 219 GKTPF------QQIINQISKLHAI-------IDPNH-EIEFPDIPE------------KD 252
Query: 401 AIDLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 253 LQDVLKCCLKRDPKQRIS 270
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 236 KSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHL 295
K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A +
Sbjct: 100 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQM 157
Query: 296 VRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLLGQ 342
+V S + + Y PE I + K DVWS GC+L + G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Query: 343 PMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAI 402
F Q++ I L ++PN+ E +FP I D
Sbjct: 218 TPF------QQIINQISKLHAI-------IDPNH-EIEFPDI------------PEKDLQ 251
Query: 403 DLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 252 DVLKCCLKRDPKQRIS 267
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV-SYIC 306
Y Q+ L ++H I +RD+KP+N+LL+ + G +++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ + APEL+ G +Y +D ++ G L E++ + F
Sbjct: 352 TPGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ +Q+ + + Y+ + + HRD+ +N+L+ E +K+ DFG ++ + + V R
Sbjct: 155 FAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQGR 213
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ A E +F I YTT+ DVWS G +L E++ LG +PG
Sbjct: 214 IPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A
Sbjct: 97 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIAN 154
Query: 294 HLVRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLL 340
+ +V S + + Y PE I + K DVWS GC+L +
Sbjct: 155 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPD 400
G+ F Q++ I L ++PN+ E +FP I D
Sbjct: 215 GKTPF------QQIINQISKLHAI-------IDPNH-EIEFPDIPE------------KD 248
Query: 401 AIDLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 249 LQDVLKCCLKRDPKQRIS 266
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 16/106 (15%)
Query: 248 LYIY-QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP------ 300
L+I+ Q+ ++ ++H G+ HRD+KP N+ + V+K+ DFG + + E
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 301 -------NVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+ + ++ Y +PE I G Y+ K+D++S G +L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLILFELL 224
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 13/60 (21%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREM---QIMR------RLEHSNIVK 79
+G G FG+V++AK AIK++ R NRE+ ++MR +LEH IV+
Sbjct: 12 CLGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVR 67
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 48/197 (24%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLL--------NPETGVLKL----CDFGSAKHLVR 297
+ Q+ +A++H L I HRD+KPQN+L+ + +TG L DFG K L
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 298 GEPNVSYIC-----SRYYRAPELIFGAIDYTTK------IDVWSAGCVLAELLLGQPMFP 346
G+ + +RAPEL+ + + TK ID++S GCV +L
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 347 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKS-HPWSKVFRVRTPPDAIDLI 405
GD + RE N F ++K H S + +A DLI
Sbjct: 241 GD------------------KYSRESNIIRGIFSLDEMKCLHDRSLI------AEATDLI 276
Query: 406 SRLLEYTPSSRISPLQV 422
S+++++ P R + ++V
Sbjct: 277 SQMIDHDPLKRPTAMKV 293
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
L LV+E++P + + + LY Q+ + + Y+ HRD+ +N+
Sbjct: 85 LRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 142
Query: 276 LLNPETGVLKLCDFGSAKHL-------VRGEPNVSYICSRYYRAPELIFGAIDYTTKIDV 328
L+ E V K+ DFG AK L V EP S I ++ APE + I ++ + DV
Sbjct: 143 LVESEAHV-KIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPESLSDNI-FSRQSDV 197
Query: 329 WSAGCVLAELL 339
WS G VL EL
Sbjct: 198 WSFGVVLYELF 208
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQD----KRFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++G LVA+K++ +R RE+QI++ L IVK +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 82 YFFYSSG 88
Y G
Sbjct: 75 GVSYGPG 81
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLL--------NPETGVLKL----CDFGSAKHLVR 297
+ Q+ +A++H L I HRD+KPQN+L+ + +TG L DFG K L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 298 GEPNVSYIC-----SRYYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSG 350
G+ + +RAPEL+ + T ID++S GCV +L GD
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD-- 256
Query: 351 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKS-HPWSKVFRVRTPPDAIDLISRLL 409
+ RE N F ++K H S + +A DLIS+++
Sbjct: 257 ----------------KYSRESNIIRGIFSLDEMKCLHDRSLI------AEATDLISQMI 294
Query: 410 EYTPSSRISPLQV 422
++ P R + ++V
Sbjct: 295 DHDPLKRPTAMKV 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLL--------NPETGVLKL----CDFGSAKHLVR 297
+ Q+ +A++H L I HRD+KPQN+L+ + +TG L DFG K L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 298 GEPNVSYIC-----SRYYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSG 350
G+ + +RAPEL+ + T ID++S GCV +L GD
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD-- 256
Query: 351 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKS-HPWSKVFRVRTPPDAIDLISRLL 409
+ RE N F ++K H S + +A DLIS+++
Sbjct: 257 ----------------KYSRESNIIRGIFSLDEMKCLHDRSLI------AEATDLISQMI 294
Query: 410 EYTPSSRISPLQV 422
++ P R + ++V
Sbjct: 295 DHDPLKRPTAMKV 307
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 36/176 (20%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNV---S 303
Y+ Q+ +L Y H I HRD+KP +LL + + +KL FG A L GE +
Sbjct: 137 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 194
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE-IIKVLG 362
+ + ++ APE++ Y +DVW G +L LL G F G ++L E IIK
Sbjct: 195 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIK--- 248
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+MNP WS + A DL+ R+L P+ RI+
Sbjct: 249 -----GKYKMNPR------------QWSHI-----SESAKDLVRRMLMLDPAERIT 282
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 41/198 (20%)
Query: 234 YSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK 293
+ K K++ + K Y + ++ IH GI H D+KP N L+ G+LKL DFG A
Sbjct: 117 WLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIAN 174
Query: 294 HLVRGEPNV---SYICSRYYRAPELI----------FGAIDYTTKIDVWSAGCVLAELLL 340
+ V S + + Y PE I + K DVWS GC+L +
Sbjct: 175 QMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 341 GQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPD 400
G+ F Q++ I L ++PN+ E +FP I D
Sbjct: 235 GKTPF------QQIINQISKLHAI-------IDPNH-EIEFPDIPE------------KD 268
Query: 401 AIDLISRLLEYTPSSRIS 418
D++ L+ P RIS
Sbjct: 269 LQDVLKCCLKRDPKQRIS 286
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ T +KL DFG ++++ E + Y S
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKAS 550
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 551 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 602
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 603 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 636
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 637 -----PRFTELKAQLSTI 649
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ +Q+ + + Y+ + + HRD+ +N+L+ E +K+ DFG ++ + + V R
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQGR 213
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ A E +F I YTT+ DVWS G +L E++ LG +PG
Sbjct: 214 IPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 36/176 (20%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPE--TGVLKLCDFGSAKHLVRGEPNV---S 303
Y+ Q+ +L Y H I HRD+KP +LL + + +KL FG A L GE +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGG 192
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVE-IIKVLG 362
+ + ++ APE++ Y +DVW G +L LL G F G ++L E IIK
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIK--- 246
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRIS 418
+MNP WS + A DL+ R+L P+ RI+
Sbjct: 247 -----GKYKMNPR------------QWSHI-----SESAKDLVRRMLMLDPAERIT 280
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 210 SPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRD 269
P + L LV+E++P + + + LY Q+ + + Y+ HRD
Sbjct: 82 GPGRQSLRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 270 IKPQNLLLNPETGVLKLCDFGSAKHL-------VRGEPNVSYICSRYYRAPELIFGAIDY 322
+ +N+L+ E V K+ DFG AK L V EP S I ++ APE + I +
Sbjct: 140 LAARNILVESEAHV-KIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESLSDNI-F 194
Query: 323 TTKIDVWSAGCVLAELL 339
+ + DVWS G VL EL
Sbjct: 195 SRQSDVWSFGVVLYELF 211
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQD----KRFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++G LVA+K++ +R RE+QI++ L IVK +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 82 YFFYSSG 88
Y G
Sbjct: 78 GVSYGPG 84
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 210 SPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRD 269
P + L LV+E++P + + + LY Q+ + + Y+ HRD
Sbjct: 83 GPGRQSLRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 140
Query: 270 IKPQNLLLNPETGVLKLCDFGSAKHL-------VRGEPNVSYICSRYYRAPELIFGAIDY 322
+ +N+L+ E V K+ DFG AK L V EP S I ++ APE + I +
Sbjct: 141 LAARNILVESEAHV-KIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESLSDNI-F 195
Query: 323 TTKIDVWSAGCVLAELL 339
+ + DVWS G VL EL
Sbjct: 196 SRQSDVWSFGVVLYELF 212
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQD----KRFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++G LVA+K++ +R RE+QI++ L IVK +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 82 YFFYSSG 88
Y G
Sbjct: 79 GVSYGPG 85
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 210 SPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRD 269
P + L LV+E++P + + + LY Q+ + + Y+ HRD
Sbjct: 95 GPGRQSLRLVMEYLPSGCLR--DFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 270 IKPQNLLLNPETGVLKLCDFGSAKHL-------VRGEPNVSYICSRYYRAPELIFGAIDY 322
+ +N+L+ E V K+ DFG AK L V EP S I ++ APE + I +
Sbjct: 153 LAARNILVESEAHV-KIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESLSDNI-F 207
Query: 323 TTKIDVWSAGCVLAELL 339
+ + DVWS G VL EL
Sbjct: 208 SRQSDVWSFGVVLYELF 224
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQD----KRFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++G LVA+K++ +R RE+QI++ L IVK +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 82 YFFYSSG 88
Y G
Sbjct: 91 GVSYGPG 97
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 41/182 (22%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL------NPETGVLKLCDFGSAKHLVRGEPNV 302
++ Q+ + Y+H I H D+KP+N++L NP +KL DFG A + G
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFK 169
Query: 303 SYICSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + + APE+ ++Y + D+WS G + LL G F G++ + L I
Sbjct: 170 NIFGTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA 225
Query: 360 VLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISP 419
V N ++ E F T A D I RLL P R++
Sbjct: 226 V------------NYDFDEEYFSN-------------TSELAKDFIRRLLVKDPKRRMTI 260
Query: 420 LQ 421
Q
Sbjct: 261 AQ 262
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 30 IGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----------REMQIMRRLEHSNIV 78
+G+G F IV + + +G+ A K ++ +R + RE+ I+R + H NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 79 KLKYFFYSSGD 89
L F + D
Sbjct: 72 TLHDIFENKTD 82
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNP--ETGVLKLCDFGSAKHLVRGEPNVSYICS 307
I Q+ + Y+H I H D+KPQN+LL+ G +K+ DFG ++ + + +
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 308 RYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTRE 367
Y APE I TT D+W+ G + LL F G+ + + I +V
Sbjct: 197 PEYLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV------- 248
Query: 368 QIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSR 416
N +Y+E F + A D I LL P R
Sbjct: 249 -----NVDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKR 279
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR 308
+ +Q+ + + Y+ + + HRD+ +N+L+ E +K+ DFG ++ + + V R
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQGR 213
Query: 309 Y---YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ A E +F I YTT+ DVWS G +L E++ LG +PG
Sbjct: 214 IPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ T +KL DFG ++++ E + Y S
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKAS 170
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 171 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 222
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 223 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 256
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 257 -----PRFTELKAQLSTI 269
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL------NPETGVLKLCDFGSAKHLVRGEPNV 302
++ Q+ + Y+H I H D+KP+N++L NP +KL DFG A + G
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFK 176
Query: 303 SYICSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + + APE+ ++Y + D+WS G + LL G F G++ + L I
Sbjct: 177 NIFGTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA 232
Query: 360 V 360
V
Sbjct: 233 V 233
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 19 DLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-----------REMQ 67
D+++ +G+G F IV + + +G+ A K ++ +R + RE+
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 68 IMRRLEHSNIVKLKYFFYSSGD 89
I+R + H NI+ L F + D
Sbjct: 68 ILREIRHPNIITLHDIFENKTD 89
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + YIH + +RD+KP N+ L +T +K+ DFG L + Y
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 312 APELIFGAIDYTTKIDVWSAGCVLAELL 339
+PE I + DY ++D+++ G +LAELL
Sbjct: 189 SPEQI-SSQDYGKEVDLYALGLILAELL 215
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLEHSNIV 78
+IG+G FG V++AK G+ IK+V + RE++ + +L+H NIV
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIV 67
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 70/190 (36%), Gaps = 66/190 (34%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLL-------------------- 277
Q P K I Q+ + L Y+H I H DIKP+N+LL
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRS 200
Query: 278 ----------------------------NPETGVLKLCDFGSA----KHLVRGEPNVSYI 305
N E +K+ D G+A KH I
Sbjct: 201 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTED------I 254
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG------VDQLVEIIK 359
+R YR+ E++ G+ Y T D+WS C+ EL G +F SG D + II+
Sbjct: 255 QTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE 313
Query: 360 VLGTPTREQI 369
+LG R+ I
Sbjct: 314 LLGKVPRKLI 323
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLL------NPETGVLKLCDFGSAKHLVRGEPNV 302
++ Q+ + Y+H I H D+KP+N++L NP +KL DFG A + G
Sbjct: 134 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR---IKLIDFGIAHKIEAGNEFK 190
Query: 303 SYICSRYYRAPELIFGAIDYT---TKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIK 359
+ + + APE+ ++Y + D+WS G + LL G F G++ + L I
Sbjct: 191 NIFGTPEFVAPEI----VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA 246
Query: 360 V 360
V
Sbjct: 247 V 247
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 12 KNYTYFSDLDNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------- 63
+N + S +++ +G+G F IV + + +G+ A K ++ +R +
Sbjct: 16 ENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSRE 74
Query: 64 ---REMQIMRRLEHSNIVKLKYFFYSSGD 89
RE+ I+R + H NI+ L F + D
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTD 103
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 231 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 231 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 232
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 233 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 227 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AYI HRD++ N+L++ E+ + K+ DFG A+ ++ + +++
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLAR-VIEDNEYTAREGAKFPI 175
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEI 357
+ APE I FG +T K DVWS G +L E++ G+ +PG + D + +
Sbjct: 176 KWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 550
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 551 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 602
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 603 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 636
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 637 -----PRFTELKAQLSTI 649
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 218 LVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
++ EFM + ++ K SKQ P + Q+ +A+I HRD++ N+L
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELI-FGAIDYTTKIDVWSAG 332
++ V K+ DFG A+ ++ + +++ + APE I FG+ +T K DVWS G
Sbjct: 317 VSASL-VCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFG 372
Query: 333 CVLAELLL-GQPMFPGDS 349
+L E++ G+ +PG S
Sbjct: 373 ILLMEIVTYGRIPYPGMS 390
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 219 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 218 LVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
++ EFM + ++ K SKQ P + Q+ +A+I HRD++ N+L
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELI-FGAIDYTTKIDVWSAG 332
++ V K+ DFG A+ ++ + +++ + APE I FG+ +T K DVWS G
Sbjct: 144 VSASL-VCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFG 199
Query: 333 CVLAELLL-GQPMFPGDS 349
+L E++ G+ +PG S
Sbjct: 200 ILLMEIVTYGRIPYPGMS 217
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 70/190 (36%), Gaps = 66/190 (34%)
Query: 239 QNFPCFYTKLYIYQLFRSLAYIHV-LGICHRDIKPQNLLL-------------------- 277
Q P K I Q+ + L Y+H I H DIKP+N+LL
Sbjct: 125 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRS 184
Query: 278 ----------------------------NPETGVLKLCDFGSA----KHLVRGEPNVSYI 305
N E +K+ D G+A KH I
Sbjct: 185 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTED------I 238
Query: 306 CSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSG------VDQLVEIIK 359
+R YR+ E++ G+ Y T D+WS C+ EL G +F SG D + II+
Sbjct: 239 QTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE 297
Query: 360 VLGTPTREQI 369
+LG R+ I
Sbjct: 298 LLGKVPRKLI 307
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ + +A++ HRD+ +N+LL V K+ DFG A+ ++ + +R
Sbjct: 166 QVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 310 -YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ APE IF + YT + DVWS G +L E+ LG +PG
Sbjct: 225 KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L++EF+P K ++ K+K Y Q+ + + Y+ HRD+ +N+
Sbjct: 88 IKLIMEFLPSGSLK--EYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV 145
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR----YYRAPELIFGAIDYTTKIDVWSA 331
L+ E V K+ DFG K + + + R ++ APE + + Y DVWS
Sbjct: 146 LVESEHQV-KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIAS-DVWSF 203
Query: 332 GCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSK 391
G L ELL DS + +K++G PT Q+ T + ++ P
Sbjct: 204 GVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQMTVTRLVNTLKEGKRLPCPP--- 254
Query: 392 VFRVRTPPDAIDLISRLLEYTPSSRIS 418
P + L+ + E+ PS+R S
Sbjct: 255 ----NCPDEVYQLMRKCWEFQPSNRTS 277
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKL 80
+G G FG V Y + ++GE VA+K + + + +E++I+R L H NIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 81 KYFFYSSG 88
K G
Sbjct: 77 KGICTEDG 84
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L++EF+P K ++ K+K Y Q+ + + Y+ HRD+ +N+
Sbjct: 100 IKLIMEFLPSGSLK--EYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV 157
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR----YYRAPELIFGAIDYTTKIDVWSA 331
L+ E V K+ DFG K + + + R ++ APE + + Y DVWS
Sbjct: 158 LVESEHQV-KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIAS-DVWSF 215
Query: 332 GCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSK 391
G L ELL DS + +K++G PT Q+ T + ++ P
Sbjct: 216 GVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQMTVTRLVNTLKEGKRLPCPP--- 266
Query: 392 VFRVRTPPDAIDLISRLLEYTPSSRIS 418
P + L+ + E+ PS+R S
Sbjct: 267 ----NCPDEVYQLMRKCWEFQPSNRTS 289
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDKRFKN-----REMQIMRRLEHSNIVKL 80
+G G FG V Y + ++GE VA+K + + + +E++I+R L H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 81 KYFFYSSG 88
K G
Sbjct: 89 KGICTEDG 96
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 117 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 172
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 173 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 224
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 225 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 258
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 259 -----PRFTELKAQLSTI 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 170
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 171 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 222
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 223 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 256
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 257 -----PRFTELKAQLSTI 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 170
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 171 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 222
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 223 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 256
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 257 -----PRFTELKAQLSTI 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 143 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 198
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 199 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 250
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 251 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 284
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 285 -----PRFTELKAQLSTI 297
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 175
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 176 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 227
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 228 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 261
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 262 -----PRFTELKAQLSTI 274
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 118 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 173
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 174 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 225
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 226 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 259
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 260 -----PRFTELKAQLSTI 272
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + Y S
Sbjct: 112 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTYYKAS 167
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 168 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 219
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 220 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 253
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 254 -----PRFTELKAQLSTI 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 249 YIYQLFRSLAYIHVLGICHRDIKPQNLLLN-PETGVLKLCDFGSAKHLVRGEPNVSYICS 307
Y+ Q L ++H I H DIKP+N++ + +K+ DFG A L E +
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 308 RYYRAPELIFGA-IDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKVLGTPTR 366
+ APE++ + + T D+W+ G + LL G F G+ ++ L + +
Sbjct: 214 AEFAAPEIVDREPVGFYT--DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 367 EQIREMNPNYTEF------KFPQIK-------SHPWSKVFRVRTPPDAIDLISRLLEYTP 413
+ ++P +F K P+ + HPW K D +L SR+ P
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK-------GDHSNLTSRI----P 320
Query: 414 SSRISPLQVR 423
SSR + ++ +
Sbjct: 321 SSRYNKIRQK 330
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 218 LVLEFMPE-TVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
++ EFM + ++ K SKQ P + Q+ +A+I HRD++ N+L
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNYIHRDLRAANIL 310
Query: 277 LNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELI-FGAIDYTTKIDVWSAG 332
++ V K+ DFG A+ + +++ + APE I FG+ +T K DVWS G
Sbjct: 311 VSASL-VCKIADFGLAR-----------VGAKFPIKWTAPEAINFGS--FTIKSDVWSFG 356
Query: 333 CVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+L E++ G+ +PG S E+I+ L
Sbjct: 357 ILLMEIVTYGRIPYPGMSN----PEVIRAL 382
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 232 KHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGS 291
KH + F F Q + + Y+H I HRD+K N+ L+ E +K+ DFG
Sbjct: 120 KHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH-EGLTVKIGDFGL 178
Query: 292 A--KHLVRGEPNVSY-ICSRYYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFP 346
A K G V S + APE+I + ++ + DV+S G VL EL+ G+ +
Sbjct: 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238
Query: 347 GDSGVDQLVEII 358
+ DQ++ ++
Sbjct: 239 HINNRDQIIFMV 250
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 12 KNYTYFSDLDNS-LAQKTVIGNGSFGIVYQAKLLDSGEL-VAIKKVL-----QDKRFKNR 64
++ +Y+ +++ S + T IG+GSFG VY+ K G++ V I KV+ Q + F+N
Sbjct: 25 RDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRN- 81
Query: 65 EMQIMRRLEHSNIV 78
E+ ++R+ H NI+
Sbjct: 82 EVAVLRKTRHVNIL 95
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLV--RGEPN------------ 301
+AY+H + I HRD+ N L+ V+ + DFG A+ +V + +P
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 302 -VSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+ + + Y+ APE+I G Y K+DV+S G VL E++
Sbjct: 179 RYTVVGNPYWMAPEMINGR-SYDEKVDVFSFGIVLCEII 216
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVL----QDKRFKNREMQIMRRLEHSNI 77
+ L V+G G FG + ++GE++ +K+++ + +R +E+++MR LEH N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 78 VKLKYFFYSSGDKKDEPTNY 97
+K Y KD+ N+
Sbjct: 70 LKFIGVLY-----KDKRLNF 84
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A R + + S
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 27 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 82
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 83 HVNI--LLFMGYST 94
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++EF+P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 91 LKLIMEFLP---YGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 147
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 148 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 202
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 203 VWSFGVVLYELF 214
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 82 YFFYSSG 88
YS+G
Sbjct: 81 GVCYSAG 87
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A R + + S
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 35 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 90
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 91 HVNI--LLFMGYST 102
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A R + + S
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 62
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 63 HVNI--LLFMGYST 74
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 428
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 429 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 261 HVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP---NVSYICSRYYRAPELIF 317
H I HRD K +N+LL + + L DFG A G+P + +R Y APE++
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 318 GAIDYTT----KIDVWSAGCVLAELL 339
GAI++ +ID+++ G VL EL+
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 346 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEXTARQGAKFPI 169
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 170 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG A+ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLAR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEXTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AYI HRD++ N+L++ E+ + K+ DFG A+ ++ + +++
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVS-ESLMCKIADFGLAR-VIEDNEYTAREGAKFPI 174
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVD 352
+ APE I FG +T K +VWS G +L E++ G+ +PG + D
Sbjct: 175 KWTAPEAINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 34 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 89
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 90 HVNI--LLFMGYST 101
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 176
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 177 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 267 HRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV--SYICSRYYRAPELIFGAIDYTT 324
HRD+KP+N+L++ + L DFG A + + + + YY APE F T
Sbjct: 157 HRDVKPENILVSADD-FAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHATY 214
Query: 325 KIDVWSAGCVLAELLLGQPMFPGD 348
+ D+++ CVL E L G P + GD
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGD 238
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEWTARQGAKFPI 176
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 177 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 35 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 90
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 91 HVNI--LLFMGYST 102
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 170
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 171 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L++EF P ++Y V + S + P + + + + ++ GI HR+IKP N++
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 277 -LNPETG--VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAI-------DYTTKI 326
+ E G V KL DFG+A+ L E VS + Y P++ A+ Y +
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 327 DVWSAGCVLAELLLG 341
D+WS G G
Sbjct: 205 DLWSIGVTFYHAATG 219
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKRFKNREMQIMRRLEHSNIVKLKYF 83
++G G+ V++ + +G+L AIK L+ + RE +++++L H NIVKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 84 FYSSGDKKDEPTNYPPLEDMKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGV 143
+++ T + L I F P + TV+ P P+ R G+
Sbjct: 76 ------EEETTTRHKVL----IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 144 DQLVE 148
+ L E
Sbjct: 126 NHLRE 130
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 172
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 173 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 9 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 64
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 65 HVNI--LLFMGYST 76
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 12 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 67
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 68 HVNI--LLFMGYST 79
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 168
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 169 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 12 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 67
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 68 HVNI--LLFMGYST 79
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 78/198 (39%), Gaps = 49/198 (24%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
LY YQL +LAY+ HRDI +N+L++ V KL DFG ++++ E + S
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV-KLGDFGLSRYM---EDSTXXKAS 170
Query: 308 R-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVL 361
+ + APE I +T+ DVW G + E+L+ G F G D V+
Sbjct: 171 KGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-------VI 222
Query: 362 GTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRISPLQ 421
G + M PN PP L+++ Y PS R
Sbjct: 223 GRIENGERLPMPPN---------------------CPPTLYSLMTKCWAYDPSRR----- 256
Query: 422 VRSITPFLIELRAVFENI 439
P EL+A I
Sbjct: 257 -----PRFTELKAQLSTI 269
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 119 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 176 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 230
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 231 VWSFGVVLYELF 242
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 82 YFFYSSG 88
YS+G
Sbjct: 109 GVCYSAG 115
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 13/74 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 62
Query: 74 HSNIVKLKYFFYSS 87
H NI L + YS+
Sbjct: 63 HVNI--LLFMGYST 74
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSA--KHLVRGEPNVSYIC-SR 308
Q + + Y+H I HRD+K N+ L+ + V K+ DFG A K G + S
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV-KIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 309 YYRAPELIFGAID--YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
+ APE+I Y+ + DV++ G VL EL+ GQ + + DQ++ ++
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKV-------LQDKRFKNREMQIMRRLE 73
D + IG+GSFG VY+ K G+ VA+K + Q + FKN E+ ++R+
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTR 62
Query: 74 HSNIVKLKYFFYSSG 88
H NI L + YS+
Sbjct: 63 HVNI--LLFMGYSTA 75
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 180
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 181 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 92 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 148
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 149 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 203
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 204 VWSFGVVLYELF 215
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 82 YFFYSSG 88
YS+G
Sbjct: 82 GVCYSAG 88
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 182
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 183 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLN--PETGVLK--LCDFGSAKHLVRGEPNVSYI 305
+ Q LA++H L I HRD+KP N+L++ G +K + DFG K L G + S
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 306 C----SRYYRAPELIFGAIDY--TTKIDVWSAGCVL 335
+ + APE++ T +D++SAGCV
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 23 SLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDK-RFKNREMQIMRRL-EHSNIVKL 80
S K V+G+G+ G + + D+ + VA+K++L + F +RE+Q++R EH N+++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR- 82
Query: 81 KYFFYSSGDKK 91
+F + D++
Sbjct: 83 --YFCTEKDRQ 91
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 95 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 151
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 152 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 206
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 207 VWSFGVVLYELF 218
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 82 YFFYSSG 88
YS+G
Sbjct: 85 GVCYSAG 91
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 91 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 147
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 148 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 202
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 203 VWSFGVVLYELF 214
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 82 YFFYSSG 88
YS+G
Sbjct: 81 GVCYSAG 87
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 88 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 145 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 199
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 200 VWSFGVVLYELF 211
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 82 YFFYSSG 88
YS+G
Sbjct: 78 GVCYSAG 84
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV---SYICSRYYRA 312
+ ++H HRDIK N+LL+ E K+ DFG A+ + V + + Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMA 203
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
PE + G I T K D++S G VL E++ G P
Sbjct: 204 PEALRGEI--TPKSDIYSFGVVLLEIITGLP 232
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 88 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 145 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 199
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 200 VWSFGVVLYELF 211
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 82 YFFYSSG 88
YS+G
Sbjct: 78 GVCYSAG 84
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 183
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 184 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 94 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 150
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 151 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 205
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 206 VWSFGVVLYELF 217
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 82 YFFYSSG 88
YS+G
Sbjct: 84 GVCYSAG 90
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV---SYICSRYYRA 312
+ ++H HRDIK N+LL+ E K+ DFG A+ + V + + Y A
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMA 203
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
PE + G I T K D++S G VL E++ G P
Sbjct: 204 PEALRGEI--TPKSDIYSFGVVLLEIITGLP 232
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 87 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 143
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 144 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 198
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 199 VWSFGVVLYELF 210
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 82 YFFYSSG 88
YS+G
Sbjct: 77 GVCYSAG 83
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 86 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 142
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 143 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 197
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 198 VWSFGVVLYELF 209
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 82 YFFYSSG 88
YS+G
Sbjct: 76 GVCYSAG 82
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 93 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 149
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 150 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 204
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 205 VWSFGVVLYELF 216
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 82 YFFYSSG 88
YS+G
Sbjct: 83 GVCYSAG 89
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 88 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 145 ILVENENRV-KIGDFGLTKVLPQDKEFFKVKEPGESPI---FWYAPESLTES-KFSVASD 199
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 200 VWSFGVVLYELF 211
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 82 YFFYSSG 88
YS+G
Sbjct: 78 GVCYSAG 84
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 174
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 175 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 174
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 175 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 175
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 176 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEXTAREGAKFPI 176
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 177 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSY---ICSRYYRA 312
+ ++H HRDIK N+LL+ E K+ DFG A+ + V + + Y A
Sbjct: 136 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXA 194
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
PE + G I T K D++S G VL E++ G P
Sbjct: 195 PEALRGEI--TPKSDIYSFGVVLLEIITGLP 223
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AYI + HRD++ N+L+ + K+ DFG A+ L+ + +++
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGL-ICKIADFGLAR-LIEDNEXTARQGAKFPI 170
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL+ G+ +PG
Sbjct: 171 KWTAPEAALYGR--FTIKSDVWSFGILLTELVTKGRVPYPG 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 106 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 162
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 163 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 217
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 218 VWSFGVVLYELF 229
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 11 AKNYTYFSDLDNSLAQKTVIGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFK 62
+ N T F + Q+ +G G+FG V Y ++GE+VA+KK+ R
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 63 NREMQIMRRLEHSNIVKLKYFFYSSGDK 90
RE++I++ L+H NIVK K YS+G +
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGRR 104
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HRD+ +N
Sbjct: 106 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 162
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 163 ILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVASD 217
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 218 VWSFGVVLYELF 229
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 11 AKNYTYFSDLDNSLAQKTVIGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFK 62
+ N T F + Q+ +G G+FG V Y ++GE+VA+KK+ R
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 63 NREMQIMRRLEHSNIVKLKYFFYSSGDK 90
RE++I++ L+H NIVK K YS+G +
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGRR 104
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDAEXTAREGAKFPI 174
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 175 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD++ N+L+ E V K+ DFG + L+ + +++
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGR-LIEDNEYTARQGAKFPI 346
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 347 KWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 115 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 172
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 132 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 189
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 179
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 180 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 180
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 181 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 115 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 172
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG + ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLGR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 199
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNV---SYICSRYYRA 312
+ ++H HRDIK N+LL+ E K+ DFG A+ + V + + Y A
Sbjct: 139 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMA 197
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAELLLGQP 343
PE + G I T K D++S G VL E++ G P
Sbjct: 198 PEALRGEI--TPKSDIYSFGVVLLEIITGLP 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 184
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 185 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + +PE I +T+ DVWS G VL E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +AY+ + HRD+ N+L+ E V K+ DFG A+ L+ + +++
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVG-ENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 310 -YRAPE-LIFGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE ++G +T K DVWS G +L EL G+ +PG
Sbjct: 180 KWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 253 LFRSLAYIHVL----------GICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP-- 300
+ R LAY+H I HRDIK +N+LL + DFG A G+
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAG 188
Query: 301 -NVSYICSRYYRAPELIFGAIDYT----TKIDVWSAGCVLAEL 338
+ +R Y APE++ GAI++ +ID+++ G VL EL
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 169
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 170 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HRD++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 174
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 175 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ R + Y+ HRD+ +N +L+ E+ +K+ DFG A+ ++ E S R+ R
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQHRHAR 189
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELL 339
P + + A++ +TTK DVWS G +L ELL
Sbjct: 190 LP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 29 VIGNGSFGIVYQAKLLDSGE---LVAIKKV-----LQDKRFKNREMQIMRRLEHSNIVKL 80
VIG G FG+VY + +D + AIK + +Q RE +MR L H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 56 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVFEFME---HGCLSDYLRTQRGL 102
Query: 242 PCFYTKL-YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 103 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 160
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 161 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 216
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLL 409
++ + T R P QI +H W R P+ SRLL
Sbjct: 217 VEDISTG----FRLYKPRLASTHVYQIMNHCW------RERPEDRPAFSRLL 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 18/107 (16%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNL-VCKVSDFGLSR-VIEDDP 199
Query: 301 NVSYICSR-----YYRAPELIFGAIDY---TTKIDVWSAGCVLAELL 339
Y + + APE AI Y T+ DVWS G V+ E++
Sbjct: 200 EAVYTTTGGKIPVRWTAPE----AIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 218 LVLEFMP-ETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
L++EF P ++Y V + S + P + + + + ++ GI HR+IKP N++
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 277 -LNPETG--VLKLCDFGSAKHLVRGEPNVSYICSRYYRAPELIFGAI-------DYTTKI 326
+ E G V KL DFG+A+ L E V + Y P++ A+ Y +
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 327 DVWSAGCVLAELLLG 341
D+WS G G
Sbjct: 205 DLWSIGVTFYHAATG 219
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 29 VIGNGSFGIVYQAKLLDSGELVAIK-----KVLQDKRFKNREMQIMRRLEHSNIVKLKYF 83
++G G+ V++ + +G+L AIK L+ + RE +++++L H NIVKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 84 FYSSGDKKDEPTNYPPLEDMKISTFSPRNKVTTVVATPGQGPDRPQEISYTNTRVSDSGV 143
+++ T + L I F P + TV+ P P+ R G+
Sbjct: 76 ------EEETTTRHKVL----IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 144 DQLVE 148
+ L E
Sbjct: 126 NHLRE 130
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
++ L + + R +A Y+ + HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-VCKVSDFGLSR-VLEDDP 201
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y S + APE I +T+ DVWS G V+ E++
Sbjct: 202 EATYTTSGGKIPIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVM 244
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKL-LDSGEL---VAIKKVLQDKRFKNR-----EMQIMRRL 72
+ + ++ VIG G FG VY+ L SG+ VAIK + K R E IM +
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 73 EHSNIVKLK 81
H NI++L+
Sbjct: 104 SHHNIIRLE 112
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 33/243 (13%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 53 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVFEFME---HGCLSDYLRTQRGL 99
Query: 242 PCFYTKLYI-YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 157
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 158 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 213
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSSRI 417
++ + T R P QI +H W + P+ SRLL +
Sbjct: 214 VEDISTG----FRLYKPRLASTHVYQIMNHCW------KERPEDRPAFSRLLRQLAAIAA 263
Query: 418 SPL 420
S L
Sbjct: 264 SGL 266
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 54 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVTEFME---HGCLSDYLRTQRGL 100
Query: 242 PCFYTKL-YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 101 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 158
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 159 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 214
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLL 409
++ + T R P QI +H W R P+ SRLL
Sbjct: 215 VEDISTG----FRLYKPRLASTHVYQIMNHCW------RERPEDRPAFSRLL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 53 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVFEFME---HGCLSDYLRTQRGL 99
Query: 242 PCFYTKL-YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 157
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 158 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 213
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
++ + T R P QI +H W + R P L+ +L E S
Sbjct: 214 VEDISTG----FRLYKPRLASTHVYQIMNHCWKE--RPEDRPAFSRLLRQLAEIAESG 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 51 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVFEFME---HGCLSDYLRTQRGL 97
Query: 242 PCFYTKL-YIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 98 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 155
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 156 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 211
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
++ + T R P QI +H W + R P L+ +L E S
Sbjct: 212 VEDISTG----FRLYKPRLASTHVYQIMNHCWKE--RPEDRPAFSRLLRQLAEIAESG 263
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--------HL---VRGEPNVS 303
R L Y+H I HRD+K N+LL+ E V K+ DFG +K HL V+G +
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELDQTHLXXVVKG--TLG 206
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
YI Y+ L T K DV+S G VL E+L +
Sbjct: 207 YIDPEYFIKGRL-------TEKSDVYSFGVVLFEVLCAR 238
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 29/238 (12%)
Query: 182 SKVFRVRTPPDAIDLISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNF 241
++V + P + L LE P + LV EFM + Y ++++
Sbjct: 73 AEVMMKLSHPKLVQLYGVCLEQAP----------ICLVFEFME---HGCLSDYLRTQRGL 119
Query: 242 PCFYTKLYI-YQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
T L + + +AY+ + HRD+ +N L+ E V+K+ DFG + V +
Sbjct: 120 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTR-FVLDDQ 177
Query: 301 NVSYICSRY---YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEI 357
S +++ + +PE +F Y++K DVWS G ++ E + + P ++ + E+
Sbjct: 178 YTSSTGTKFPVKWASPE-VFSFSRYSSKSDVWSFGVLMWE-VFSEGKIPYENRSNS--EV 233
Query: 358 IKVLGTPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRLLEYTPSS 415
++ + T R P QI +H W + R P L+ +L E S
Sbjct: 234 VEDISTG----FRLYKPRLASTHVYQIMNHCWKE--RPEDRPAFSRLLRQLAEIAESG 285
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAK--------HL---VRGEPNVS 303
R L Y+H I HRD+K N+LL+ E V K+ DFG +K HL V+G +
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELGQTHLXXVVKG--TLG 206
Query: 304 YICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQ 342
YI Y+ L T K DV+S G VL E+L +
Sbjct: 207 YIDPEYFIKGRL-------TEKSDVYSFGVVLFEVLCAR 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-----YY 310
+ Y+ +G HRD+ +N+L+N V K+ DFG ++ ++ +P +Y +
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLSR-VLEDDPEAAYTTRGGKIPIRW 193
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELL 339
APE I +T+ DVWS G V+ E++
Sbjct: 194 TAPEAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLE------HS 75
++ + K ++G G FG VY+ +L D G LVA+K+ L+++R + E+Q +E H
Sbjct: 38 DNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHR 95
Query: 76 NIVKLKYF 83
N+++L+ F
Sbjct: 96 NLLRLRGF 103
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 255 RSLAYIHVL---GICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
R LAY+H I HRD+K N+LL+ E + + DFG AK + + +V
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ APE + + K DV+ G +L EL+ GQ F
Sbjct: 209 HIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR-----YY 310
+ Y+ LG HRD+ +N+L++ V K+ DFG ++ ++ +P+ +Y + +
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSR-VLEDDPDAAYTTTGGKIPIRW 220
Query: 311 RAPELIFGAIDYTTKIDVWSAGCVLAELL 339
APE I +++ DVWS G V+ E+L
Sbjct: 221 TAPEAI-AFRTFSSASDVWSFGVVMWEVL 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 218 LVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
+++E P Y HY ++K + LY Q+ +++AY+ + HRDI +N+L
Sbjct: 101 IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 157
Query: 277 L-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
+ +PE +KL DFG +++ + E +R + +PE I +TT DVW
Sbjct: 158 VASPEC--VKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFA 213
Query: 333 CVLAELL-LG-QPMF 345
+ E+L G QP F
Sbjct: 214 VCMWEILSFGKQPFF 228
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 29 VIGNGSFGIVYQAKLLD-SGEL--VAIKKVLQDKRFKNRE-----MQIMRRLEHSNIVKL 80
++G G FG VY+ + GE VA+K +D N+E IM+ L+H +IVKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 81 KYFFYSSGDKKDEPT 95
G ++EPT
Sbjct: 91 ------IGIIEEEPT 99
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 216 LNLVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQN 274
L L++E++P Y + Y K K+ Y Q+ + + Y+ HR++ +N
Sbjct: 89 LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRN 145
Query: 275 LLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKID 327
+L+ E V K+ DFG K L + EP S I ++ APE + + ++ D
Sbjct: 146 ILVENENRV-KIGDFGLTKVLPQDKEYYKVKEPGESPI---FWYAPESLTES-KFSVASD 200
Query: 328 VWSAGCVLAELL 339
VWS G VL EL
Sbjct: 201 VWSFGVVLYELF 212
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 82 YFFYSSG 88
YS+G
Sbjct: 79 GVCYSAG 85
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 218 LVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
+++E P Y HY ++K + LY Q+ +++AY+ + HRDI +N+L
Sbjct: 89 IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 145
Query: 277 L-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
+ +PE +KL DFG +++ + E +R + +PE I +TT DVW
Sbjct: 146 VASPEC--VKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFA 201
Query: 333 CVLAELL-LG-QPMF 345
+ E+L G QP F
Sbjct: 202 VCMWEILSFGKQPFF 216
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 29 VIGNGSFGIVYQAKLLD-SGEL--VAIKKVLQDKRFKNRE-----MQIMRRLEHSNIVKL 80
++G G FG VY+ + GE VA+K +D N+E IM+ L+H +IVKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 218 LVLEFMPETVYKVAKHY-SKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNLL 276
+++E P Y HY ++K + LY Q+ +++AY+ + HRDI +N+L
Sbjct: 85 IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 141
Query: 277 L-NPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
+ +PE +KL DFG +++ + E +R + +PE I +TT DVW
Sbjct: 142 VASPEC--VKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFA 197
Query: 333 CVLAELL-LG-QPMF 345
+ E+L G QP F
Sbjct: 198 VCMWEILSFGKQPFF 212
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 29 VIGNGSFGIVYQAKLLD-SGEL--VAIKKVLQDKRFKNRE-----MQIMRRLEHSNIVKL 80
++G G FG VY+ + GE VA+K +D N+E IM+ L+H +IVKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 81 KYFFYSSGDKKDEPT 95
G ++EPT
Sbjct: 75 ------IGIIEEEPT 83
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ + HRD+ +N+L+N V K+ DFG ++ L
Sbjct: 113 FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSS 171
Query: 301 NVSYICSR------YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+ +Y S + APE I +T+ D WS G V+ E++
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 6 GELGFAKNYTYFSDLDNSLAQ-KTVIGNGSFGIVYQAKLLDSGE---LVAIKKVLQDKRF 61
G + FAK ++D S + + VIG G FG V + +L G+ VAIK +
Sbjct: 3 GSMEFAK------EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE 56
Query: 62 KNR-----EMQIMRRLEHSNIVKLK 81
+ R E IM + EH NI++L+
Sbjct: 57 RQRREFLSEASIMGQFEHPNIIRLE 81
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 93 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 151 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 208
Query: 333 CVLAELL 339
+ EL+
Sbjct: 209 VTVWELM 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 93 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 151 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 208
Query: 333 CVLAELL 339
+ EL+
Sbjct: 209 VTVWELM 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSP 189
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 190 PEVLMYS-KFSSKSDIWAFGVLMWEI 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRG-------EP 300
L+ Q+ +AY+H HRD+ +N+LL+ + ++K+ DFG AK + G E
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 301 NVSYICSRYYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
S + ++ APE + + DVWS G L ELL
Sbjct: 197 GDSPV---FWYAPECL-KEYKFYYASDVWSFGVTLYELL 231
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIVKL 80
+G G FG V Y +GE+VA+K + D ++R E+ I+R L H +I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 81 KYFFYSSGDKKDEPT-NYPPLEDMKISTFSPRNKV 114
K +G + Y PL ++ + PR+ +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLR--DYLPRHSI 131
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase
Domain From D. Discoideum Bound To Appcp
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKK-VLQD--------KRFK--NREMQIM 69
DN + + IG G FG+V++ +L+ +VAIK +L D ++F+ RE+ IM
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 70 RRLEHSNIVKL 80
L H NIVKL
Sbjct: 78 SNLNHPNIVKL 88
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 95 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 153 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 210
Query: 333 CVLAELL 339
+ EL+
Sbjct: 211 VTVWELM 217
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKK-VLQD--------KRFK--NREMQIM 69
DN + + IG G FG+V++ +L+ +VAIK +L D ++F+ RE+ IM
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 70 RRLEHSNIVKL 80
L H NIVKL
Sbjct: 78 SNLNHPNIVKL 88
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain
Bound To Appcp From D. Discoideum
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKK-VLQD--------KRFK--NREMQIM 69
DN + + IG G FG+V++ +L+ +VAIK +L D ++F+ RE+ IM
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 70 RRLEHSNIVKL 80
L H NIVKL
Sbjct: 78 SNLNHPNIVKL 88
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
Q+ +A+I HR+++ N+L++ +T K+ DFG A+ L+ + +++
Sbjct: 113 QIAEGMAFIEERNYIHRNLRAANILVS-DTLSCKIADFGLAR-LIEDNEYTAREGAKFPI 170
Query: 310 -YRAPELI-FGAIDYTTKIDVWSAGCVLAELLL-GQPMFPG 347
+ APE I +G +T K DVWS G +L E++ G+ +PG
Sbjct: 171 KWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKNREMQIMRRLE------HS 75
++ K ++G G FG VY+ +L D G LVA+K+ L+++R + E+Q +E H
Sbjct: 30 DNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHR 87
Query: 76 NIVKLKYF 83
N+++L+ F
Sbjct: 88 NLLRLRGF 95
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 255 RSLAYIHVL---GICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY-- 309
R LAY+H I HRD+K N+LL+ E + + DFG AK + + +V
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAELLLGQPMF 345
+ APE + + K DV+ G +L EL+ GQ F
Sbjct: 201 HIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 92 VQLIMQLMP--FGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 150 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 207
Query: 333 CVLAELL 339
+ EL+
Sbjct: 208 VTVWELM 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 189
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 190 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 249 MGCPAGCPREMYDLMNLCWT 268
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 189
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 190 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 249 MGCPAGCPREMYDLMNLCWT 268
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADEN-XYKAQTH 173
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 174 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 233 MGCPAGCPREMYDLMNLCWT 252
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 187
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 188 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 246
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 247 MGCPAGCPREMYDLMNLCWT 266
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 229
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 137 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 196
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 197 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 255
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 256 WSFGVLLWEIFSLGYMPYPSKSNQEVL 282
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 179
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 180 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 238
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 239 MGCPAGCPREMYDLMNLCWT 258
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 531
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 532 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 590
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 591 MGCPAGCPREMYDLMNLCWT 610
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 229
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 176
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 177 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 235
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 236 WSFGVLLWEIFSLGYMPYPSKSNQEVL 262
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 169
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 170 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 228
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 229 MGCPAGCPREMYDLMNLCWT 248
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 167
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 168 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 226
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 227 MGCPAGCPREMYDLMNLCWT 246
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 173
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 174 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 233 MGCPAGCPREMYDLMNLCWT 252
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 95 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 152
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 153 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 210
Query: 333 CVLAELL 339
+ EL+
Sbjct: 211 VTVWELM 217
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSP 169
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 170 PEVLMYS-KFSSKSDIWAFGVLMWEI 194
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 93 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 151 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 208
Query: 333 CVLAELL 339
+ EL+
Sbjct: 209 VTVWELM 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDK----RFKNREMQIMRRLEHSNIVKLK 81
+G G+FG V Y ++GE+VA+KK+ R RE++I++ L+H NIVK K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 82 YFFYSSG 88
YS+G
Sbjct: 81 GVCYSAG 87
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKL--YIYQLFRSLAYIHVLGICHRDIKPQ 273
L L++E++P Y + Y ++ + KL Y Q+ + + Y+ HRD+ +
Sbjct: 91 LKLIMEYLP---YGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR 146
Query: 274 NLLLNPETGVLKLCDFGSAKHLVRG-------EPNVSYICSRYYRAPELIFGAIDYTTKI 326
N+L+ E V K+ DFG K L + EP S I ++ APE + + ++
Sbjct: 147 NILVENENRV-KIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPESLTES-KFSVAS 201
Query: 327 DVWSAGCVLAELL 339
DVWS G VL EL
Sbjct: 202 DVWSFGVVLYELF 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 94 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 152 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 209
Query: 333 CVLAELL 339
+ EL+
Sbjct: 210 VTVWELM 216
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKT-VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR 60
G +G A N L + +K V+G+G+FG VY+ + GE V I +++ R
Sbjct: 1 GSMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 56
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 250 IYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY 309
++Q+ + Y+ HRD+ +N+LL + K+ DFG +K L R + N Y +
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKAL-RADENY-YKAQTH 532
Query: 310 ------YRAPELIFGAIDYTTKIDVWSAGCVLAELL-LGQPMFPGDSG--VDQLVEIIKV 360
+ APE I +++K DVWS G ++ E GQ + G G V ++E +
Sbjct: 533 GKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 591
Query: 361 LGTPT---REQIREMNPNYT 377
+G P RE MN +T
Sbjct: 592 MGCPAGCPREMYDLMNLCWT 611
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 127 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 186
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 187 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 245
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 246 WSFGVLLWEIFSLGYMPYPSKSNQEVL 272
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 243
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 116 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSP 173
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 174 PEVLMYS-KFSSKSDIWAFGVLMWEI 198
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 92 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 149
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 150 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 207
Query: 333 CVLAELL 339
+ EL+
Sbjct: 208 VTVWELM 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 98 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 156 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 213
Query: 333 CVLAELL 339
+ EL+
Sbjct: 214 VTVWELM 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSP 174
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 175 PEVLMYS-KFSSKSDIWAFGVLMWEI 199
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+++ MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSP 189
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 190 PEVLMYS-KFSSKSDIWAFGVLMWEI 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 229
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVL 256
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R + Y+ + HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNL-VCKVSDFGMSR-VLEDDP 185
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + APE I +T+ DVWS G V+ E++
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRA 312
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E S + S++ +
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSP 180
Query: 313 PELIFGAIDYTTKIDVWSAGCVLAEL 338
PE++ + +++K D+W+ G ++ E+
Sbjct: 181 PEVLMYS-KFSSKSDIWAFGVLMWEI 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 243
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 110 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 228
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 229 WSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 210
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 269
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 270 WSFGVLLWEIFSLGYMPYPSKSNQEVL 296
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 102 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 161
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 162 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 220
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 221 WSFGVLLWEIFSLGYMPYPSKSNQEVL 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ +AY+ HRD+ +N L+ E V+K+ DFG ++++ + YY+
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADFGLSRNIYSAD---------YYK 231
Query: 312 A------------PELIFGAIDYTTKIDVWSAGCVLAELL 339
A PE IF YTT+ DVW+ G VL E+
Sbjct: 232 ADGNDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIF 270
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 30 IGNGSFGIVYQAKL-----LDSGELVAIKKVLQDKRFK-----NREMQIMRRLEHSNIVK 79
IG G+FG V+QA+ + +VA+K + ++ RE +M ++ NIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 80 L 80
L
Sbjct: 115 L 115
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 93 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 151 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 208
Query: 333 CVLAELL 339
+ EL+
Sbjct: 209 VTVWELM 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
++LE M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 128 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 187
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 188 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 246
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 247 WSFGVLLWEIFSLGYMPYPSKSNQEVL 273
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 98 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 156 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 213
Query: 333 CVLAELL 339
+ EL+
Sbjct: 214 VTVWELM 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ + HRD+ +N+L+N V K+ DFG ++ L
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTS 190
Query: 301 NVSYICSR------YYRAPELIFGAIDY---TTKIDVWSAGCVLAELL 339
+ +Y + + APE AI Y T+ DVWS G V+ E++
Sbjct: 191 DPTYTSALGGKIPIRWTAPE----AIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
+++E M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 125 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 243
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R + Y+ + HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 113 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSR-VLEDDP 170
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + APE I +T+ DVWS G V+ E++
Sbjct: 171 EAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLITQLMP--FGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
L+ Q+ +AY+H HR++ +N+LL+ + ++K+ DFG AK + G
Sbjct: 121 LFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDR-LVKIGDFGLAKAVPEGH-------- 171
Query: 308 RYYR------------APELIFGAIDYTTKIDVWSAGCVLAELL 339
YYR APE + + DVWS G L ELL
Sbjct: 172 EYYRVREDGDSPVFWYAPECL-KEYKFYYASDVWSFGVTLYELL 214
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIVKL 80
+G G FG V Y +GE+VA+K + D ++R E+ I+R L H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 81 KYFFYSSGDKKDE-PTNYPPLEDMKISTFSPRNKV 114
K G+K + Y PL ++ + PR+ +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSI 114
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 218 LVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLA----YIHVLGICHRDIKPQ 273
+++E M K ++ + + P L + + R +A Y+ HRDI +
Sbjct: 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 274 NLLLN-PETG-VLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDV 328
N LL P G V K+ DFG A+ + R C+ + PE I +T+K D
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDT 228
Query: 329 WSAGCVLAELL-LGQPMFPGDSGVDQL 354
WS G +L E+ LG +P S + L
Sbjct: 229 WSFGVLLWEIFSLGYMPYPSKSNQEVL 255
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 197 ISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRS 256
I RLL P S L LV +++P + + H + + + Q+ +
Sbjct: 95 IVRLLGLCPGSS-------LQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKG 145
Query: 257 LAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAP 313
+ Y+ G+ HR++ +N+LL + V ++ DFG A L + + Y ++ + A
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQV-QVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 314 ELI-FGAIDYTTKIDVWSAGCVLAELL 339
E I FG YT + DVWS G + EL+
Sbjct: 205 ESIHFG--KYTHQSDVWSYGVTVWELM 229
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK---KVLQDKRFKNR------EMQIMRR 71
+ L + V+G+G FG V++ + GE + I KV++DK + M +
Sbjct: 30 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS 89
Query: 72 LEHSNIVKL 80
L+H++IV+L
Sbjct: 90 LDHAHIVRL 98
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R + Y+ + HRD+ +N+L+N V K+ DFG ++ ++ +P
Sbjct: 107 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL-VCKVSDFGMSR-VLEDDP 164
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+Y + APE I +T+ DVWS G V+ E++
Sbjct: 165 EAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 125 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 182
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 183 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 240
Query: 333 CVLAELL 339
+ EL+
Sbjct: 241 VTVWELM 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 116 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 173
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 174 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 231
Query: 333 CVLAELL 339
+ EL+
Sbjct: 232 VTVWELM 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 98 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 156 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 213
Query: 333 CVLAELL 339
+ EL+
Sbjct: 214 VTVWELM 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 94 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 152 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 209
Query: 333 CVLAELL 339
+ EL+
Sbjct: 210 VTVWELM 216
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKT-VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR 60
G +G A N L + +K V+G+G+FG VY+ + GE V I +++ R
Sbjct: 1 GSMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 56
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 98 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 155
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 156 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 213
Query: 333 CVLAELL 339
+ EL+
Sbjct: 214 VTVWELM 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 101 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 158
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 159 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 216
Query: 333 CVLAELL 339
+ EL+
Sbjct: 217 VTVWELM 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 93 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 150
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 151 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 208
Query: 333 CVLAELL 339
+ EL+
Sbjct: 209 VTVWELM 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 197 ISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRS 256
I RLL P S L LV +++P + + H + + + Q+ +
Sbjct: 77 IVRLLGLCPGSS-------LQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 257 LAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAP 313
+ Y+ G+ HR++ +N+LL + V ++ DFG A L + + Y ++ + A
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQV-QVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 314 ELI-FGAIDYTTKIDVWSAGCVLAELL 339
E I FG YT + DVWS G + EL+
Sbjct: 187 ESIHFG--KYTHQSDVWSYGVTVWELM 211
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK---KVLQDKRFKNR------EMQIMRR 71
+ L + V+G+G FG V++ + GE + I KV++DK + M +
Sbjct: 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS 71
Query: 72 LEHSNIVKLKYFFYSSGDKKDEPTNYPPLEDM 103
L+H++IV+L G T Y PL +
Sbjct: 72 LDHAHIVRL--LGLCPGSSLQLVTQYLPLGSL 101
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 94 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 152 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 209
Query: 333 CVLAELL 339
+ EL+
Sbjct: 210 VTVWELM 216
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKT-VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR 60
G +G A N L + +K V+G+G+FG VY+ + GE V I +++ R
Sbjct: 1 GAMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 56
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSR------Y 309
++ Y+ HRD+ +N L+N + GV+K+ DFG +++++ E Y SR
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQ-GVVKVSDFGLSRYVLDDE----YTSSRGSKFPVR 171
Query: 310 YRAPELIFGAIDYTTKIDVWSAGCVLAEL 338
+ PE++ + +++K D+W+ G ++ E+
Sbjct: 172 WSPPEVLMYS-KFSSKSDIWAFGVLMWEI 199
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 94 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 151
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 152 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 209
Query: 333 CVLAELL 339
+ EL+
Sbjct: 210 VTVWELM 216
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 6 GELGFAKNYTYFSDLDNSLAQKT-VIGNGSFGIVYQAKLLDSGELVAIKKVLQDKR 60
G +G A N L + +K V+G+G+FG VY+ + GE V I +++ R
Sbjct: 1 GAMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 56
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 97 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 154
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 155 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 212
Query: 333 CVLAELL 339
+ EL+
Sbjct: 213 VTVWELM 219
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 22/104 (21%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
L+ Q+ +AY+H HR + +N+LL+ + ++K+ DFG AK + G
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR-LVKIGDFGLAKAVPEGH-------- 166
Query: 308 RYYR------------APELIFGAIDYTTKIDVWSAGCVLAELL 339
YYR APE + Y DVWS G L ELL
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVL-----QDKRFKNREMQIMRRLEHSNIVKL 80
+G G FG V Y +GE+VA+K + Q + RE++I+R L H +IVK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 81 KYFFYSSGDKKDEPT-NYPPLEDMKISTFSPRNKV 114
K G+K + Y PL ++ + PR+ V
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLR--DYLPRHCV 109
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 22/104 (21%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
L+ Q+ +AY+H HR + +N+LL+ + ++K+ DFG AK + G
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR-LVKIGDFGLAKAVPEGH-------- 165
Query: 308 RYYR------------APELIFGAIDYTTKIDVWSAGCVLAELL 339
YYR APE + Y DVWS G L ELL
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVL-----QDKRFKNREMQIMRRLEHSNIVKL 80
+G G FG V Y +GE+VA+K + Q + RE++I+R L H +IVK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 81 KYFFYSSGDKKDEPT-NYPPLEDMKISTFSPRNKV 114
K G+K + Y PL ++ + PR+ V
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLR--DYLPRHCV 108
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 149 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTVWELM 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 248 LYIYQLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICS 307
L+ Q+ +AY+H HR++ +N+LL+ + ++K+ DFG AK + G
Sbjct: 121 LFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDR-LVKIGDFGLAKAVPEGH-------- 171
Query: 308 RYYR------------APELIFGAIDYTTKIDVWSAGCVLAELL 339
YYR APE + + DVWS G L ELL
Sbjct: 172 EYYRVREDGDSPVFWYAPECL-KEYKFYYASDVWSFGVTLYELL 214
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 30 IGNGSFGIV----YQAKLLDSGELVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIVKL 80
+G G FG V Y +GE+VA+K + D ++R E+ I+R L H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 81 KYFFYSSGDKKDE-PTNYPPLEDMKISTFSPRNKV 114
K G+K + Y PL ++ + PR+ +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSI 114
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R + Y+ LG HRD+ +N+L++ V K+ DFG ++ ++ +P
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSR-VLEDDP 205
Query: 301 NVSYICSR-----YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+ + + + APE I +++ DVWS G V+ E+L
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVL 248
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + + Y+ + HRD+ +N+
Sbjct: 85 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 142
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 143 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 200
Query: 333 CVLAELL 339
+ EL+
Sbjct: 201 VTVWELM 207
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--XXSVHNKTGA 196
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 250
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 251 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 290
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ L+ + MP + + + K N Y + Q+ + Y+ + HRD+ +N+
Sbjct: 88 VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNV 145
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG AK L E + + A E I I YT + DVWS G
Sbjct: 146 LVKTPQHV-KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYG 203
Query: 333 CVLAELL 339
+ EL+
Sbjct: 204 VTVWELM 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 245 YTKLYIYQLFRSLA----YIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEP 300
+T + + + R +A Y+ + HRD+ +N+L+N V K+ DFG ++ L
Sbjct: 115 FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSS 173
Query: 301 NVSYICSR------YYRAPELIFGAIDYTTKIDVWSAGCVLAELL 339
+ + S + APE I +T+ D WS G V+ E++
Sbjct: 174 DPTETSSLGGKIPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGE---LVAIKKVLQDKRFKNR-----EMQIMRRLEHSNIV 78
+ VIG G FG V + +L G+ VAIK + + R E IM + EH NI+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 79 KLK 81
+L+
Sbjct: 81 RLE 83
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 195
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 251
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 252 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 187
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 243
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 244 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 195
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 251
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 252 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 194
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 250
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 251 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 214
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 270
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 271 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 310
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 190
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 246
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 247 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 286
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ ++ E + ++
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKE--FDSVHNKTGA 198
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 252
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 253 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 193
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 249
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 250 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 192
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 248
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 249 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + Y+ HRD+ +N +L+ E +K+ DFG A+ + E Y
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKT 213
Query: 312 APEL--IFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLG 362
+L + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---- 269
Query: 363 TPTREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 270 ----QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 309
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 29/190 (15%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLG--ICHRDIKPQ 273
L++V E++ H S +++ Y + + + Y+H I HRD+K
Sbjct: 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSP 168
Query: 274 NLLLNPETGVLKLCDFGSAK---------HLVRGEPNVSYICSRYYRAPELIFGAIDYTT 324
NLL++ + V K+CDFG ++ G P + APE++
Sbjct: 169 NLLVDKKYTV-KVCDFGLSRLKASXFLXSKXAAGTPE--------WMAPEVLRDEPS-NE 218
Query: 325 KIDVWSAGCVLAELL-LGQPMFPGDSGVDQLVEIIKVLGTPTR--EQIREMNPNYTEFKF 381
K DV+S G +L EL L QP G +++ +G + E R +NP
Sbjct: 219 KSDVYSFGVILWELATLQQPW-----GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE 273
Query: 382 PQIKSHPWSK 391
+ PW +
Sbjct: 274 GCWTNEPWKR 283
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIV 78
K IG GSFG V++A+ G VA+K +L ++ F RE+ IM+RL H NIV
Sbjct: 42 KEKIGAGSFGTVHRAEW--HGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 197
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 251
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 252 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 195
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 249
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 250 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 202
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 256
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 257 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 256
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 310
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 311 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 350
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ LV + MP + ++ + K N + Q+ + + Y+ + HRD+ +N+
Sbjct: 91 IQLVTQLMPHGC--LLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNV 148
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG A+ L E + + + A E I +T + DVWS G
Sbjct: 149 LVKSPNHV-KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYG 206
Query: 333 CVLAELL 339
+ EL+
Sbjct: 207 VTIWELM 213
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 21 DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK---KVLQDK-------RFKNREMQIMR 70
+ L + V+G+G+FG VY+ + GE V I K+L + F + E IM
Sbjct: 14 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMA 72
Query: 71 RLEHSNIVKL 80
++H ++V+L
Sbjct: 73 SMDHPHLVRL 82
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 27 KTVIGNGSFGIVYQAKLLDSGELVAIKKVLQDKRFKN-------REMQIMRRLEHSNIV 78
K IG GSFG V++A+ G VA+K +L ++ F RE+ IM+RL H NIV
Sbjct: 42 KEKIGAGSFGTVHRAEW--HGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 197
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 251
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 252 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
Q+ + + ++ HRD+ +N +L+ E +K+ DFG A+ + E + ++
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDSVHNKTGA 198
Query: 312 APELIFGAID------YTTKIDVWSAGCVLAELLL-GQPMFPGDSGVDQLVEIIKVLGTP 364
+ + A++ +TTK DVWS G +L EL+ G P +P + D V ++
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------ 252
Query: 365 TREQIREMNPNYTEFKFPQIKSHPWSKVFRVRTPPDAIDLISRL 408
+ R + P Y ++ W +R P +L+SR+
Sbjct: 253 --QGRRLLQPEYCPDPLYEVMLKCWHPKAEMR--PSFSELVSRI 292
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 216 LNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRSLAYIHVLGICHRDIKPQNL 275
+ LV + MP + ++ + K N + Q+ + + Y+ + HRD+ +N+
Sbjct: 114 IQLVTQLMPHGC--LLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNV 171
Query: 276 LLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAPELIFGAIDYTTKIDVWSAG 332
L+ V K+ DFG A+ L E + + + A E I +T + DVWS G
Sbjct: 172 LVKSPNHV-KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYG 229
Query: 333 CVLAELL 339
+ EL+
Sbjct: 230 VTIWELM 236
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 9 GFAKNYTYFSDL-DNSLAQKTVIGNGSFGIVYQAKLLDSGELVAIK---KVLQDK----- 59
G A N L + L + V+G+G+FG VY+ + GE V I K+L +
Sbjct: 24 GTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 83
Query: 60 --RFKNREMQIMRRLEHSNIVKL 80
F + E IM ++H ++V+L
Sbjct: 84 NVEFMD-EALIMASMDHPHLVRL 105
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
R + Y+ HRD+ +N+L+ E V K+ DFG L RG+ Y+ R P
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFG----LSRGQE--VYVKKTMGRLP- 204
Query: 315 LIFGAID------YTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ + AI+ YTT DVWS G +L E++ LG + G
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELV--AIKKVLQ-----DKRFKNREMQIMRRL-E 73
N + + VIG G+FG V +A++ G + AIK++ + D R E++++ +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 74 HSNIVKL 80
H NI+ L
Sbjct: 85 HPNIINL 91
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 255 RSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPE 314
R + Y+ HRD+ +N+L+ E V K+ DFG L RG+ Y+ R P
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFG----LSRGQE--VYVKKTMGRLP- 194
Query: 315 LIFGAID------YTTKIDVWSAGCVLAELL-LGQPMFPG 347
+ + AI+ YTT DVWS G +L E++ LG + G
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 22 NSLAQKTVIGNGSFGIVYQAKLLDSGELV--AIKKVLQ-----DKRFKNREMQIMRRL-E 73
N + + VIG G+FG V +A++ G + AIK++ + D R E++++ +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 74 HSNIVKL 80
H NI+ L
Sbjct: 75 HPNIINL 81
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLL----NPETGVLKLCDFGSAKHLV 296
QL + Y+H + +RD+KP+N L+ N + V+ + DFG AK +
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYI 153
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 249 YIYQ-LFRSLAYIHVLGICHRDIKPQNLLLNPETGV--------LKLCDFGSAKHLVRGE 299
YI Q + ++L YIH +G HR +K ++L++ + V L + G + +V
Sbjct: 132 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF 191
Query: 300 PNVSYICSRYYRAPELIFGAID-YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
P S + + +PE++ + Y K D++S G EL G F L+E
Sbjct: 192 PKYS-VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-- 248
Query: 359 KVLGT 363
K+ GT
Sbjct: 249 KLNGT 253
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 249 YIYQ-LFRSLAYIHVLGICHRDIKPQNLLLNPETGV--------LKLCDFGSAKHLVRGE 299
YI Q + ++L YIH +G HR +K ++L++ + V L + G + +V
Sbjct: 116 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF 175
Query: 300 PNVSYICSRYYRAPELIFGAID-YTTKIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEII 358
P S + + +PE++ + Y K D++S G EL G F L+E
Sbjct: 176 PKYS-VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-- 232
Query: 359 KVLGT 363
K+ GT
Sbjct: 233 KLNGT 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 249 YIYQLFRSLAYIHVLG--ICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYIC 306
+ Q+ + L ++H I HRD+K N+ + TG +K+ D G A L R + I
Sbjct: 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIG 192
Query: 307 SRYYRAPELIFGAIDYTTKIDVWSAG-CVL 335
+ + APE Y +DV++ G C L
Sbjct: 193 TPEFXAPEXY--EEKYDESVDVYAFGXCXL 220
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 256 SLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYRAPEL 315
++ Y+ HRD+ +N+L++ E V K+ DFG K + + APE
Sbjct: 120 AMEYLEGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAPEA 176
Query: 316 IFGAIDYTTKIDVWSAGCVLAEL 338
+ A ++TK DVWS G +L E+
Sbjct: 177 LREAA-FSTKSDVWSFGILLWEI 198
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLL----NPETGVLKLCDFGSAKHLV 296
QL + Y+H + +RD+KP+N L+ N V+ + DFG AK +
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYI 161
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 197 ISRLLEYTPSSRISPLQVFLNLVLEFMPETVYKVAKHYSKSKQNFPCFYTKLYIYQLFRS 256
+SRLL +S + LV + MP + H +++ + Q+ +
Sbjct: 81 VSRLLGICLTSTV-------QLVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 257 LAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRY---YRAP 313
++Y+ + + HRD+ +N+L+ V K+ DFG A+ L E + + A
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNHV-KITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 314 ELIFGAIDYTTKIDVWSAGCVLAELL 339
E I +T + DVWS G + EL+
Sbjct: 191 ESILRR-RFTHQSDVWSYGVTVWELM 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE---PNVSYICSR 308
++ +AY++ HRD+ +N ++ + V K+ DFG + + + +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTV-KIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAEL--LLGQP 343
+ APE + + +TT D+WS G VL E+ L QP
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE---PNVSYICSR 308
++ +AY++ HRD+ +N ++ + V K+ DFG + + + +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTV-KIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAEL--LLGQP 343
+ APE + + +TT D+WS G VL E+ L QP
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE---PNVSYICSR 308
++ +AY++ HRD+ +N ++ E +K+ DFG + + + +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAEL--LLGQP 343
+ +PE + + +TT DVWS G VL E+ L QP
Sbjct: 199 RWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 25/106 (23%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGEPNVSYICSRYYR 311
++ +AY++ HRD+ +N ++ E +K+ DFG + + + YYR
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYR 195
Query: 312 ------------APELIFGAIDYTTKIDVWSAGCVLAEL--LLGQP 343
+PE + + +TT DVWS G VL E+ L QP
Sbjct: 196 KGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 252 QLFRSLAYIHVLGICHRDIKPQNLLLNPETGVLKLCDFGSAKHLVRGE---PNVSYICSR 308
++ +AY++ HRD+ +N ++ + V K+ DFG + + + +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTV-KIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 309 YYRAPELIFGAIDYTTKIDVWSAGCVLAEL--LLGQP 343
+ APE + + +TT D+WS G VL E+ L QP
Sbjct: 194 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQP 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,799,812
Number of Sequences: 62578
Number of extensions: 596972
Number of successful extensions: 5089
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 1807
Number of HSP's gapped (non-prelim): 2200
length of query: 444
length of database: 14,973,337
effective HSP length: 102
effective length of query: 342
effective length of database: 8,590,381
effective search space: 2937910302
effective search space used: 2937910302
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)