RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10215
(113 letters)
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 103 bits (259), Expect = 1e-27
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LLEYTP++R++PL+ACAH FFDELR+P LPNG P LFNFT QEL+ P L L+P
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIP 379
Query: 70 K--------RPGSTEDGPNPSSSSAPPPAGPTTSTDLSETT 102
+ + +++ S S +T
Sbjct: 380 PHARIQAAASTPTNATAASDANTGDRGQTNNAASASASNST 420
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 101 bits (253), Expect = 5e-27
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LLEYTPS+R++ ++A H FFDELR +PNG LPPLFN+T++EL+++P+L + L+P
Sbjct: 305 LLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVP 364
Query: 70 KRP-GSTEDGPNPSSSSAPPP 89
+ + P P
Sbjct: 365 QHAEAELLSRGIDVHNFQPIP 385
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 88.1 bits (219), Expect = 3e-22
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPP-LFNFTEQELAIQPNLNAALL 68
LL+Y P R+ P +A H +FDEL +PAT LPN LP LF F E+ + A L
Sbjct: 298 LLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKL 357
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 82.9 bits (205), Expect = 3e-20
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA-------TTLPNGN--PLPPLFNFTEQELAIQ 60
+L Y P RI+P +A AH FFD LRN + P+G +P LFNF+ EL+I
Sbjct: 305 ILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSII 364
Query: 61 P-NLNAALLPK 70
P N+ +LPK
Sbjct: 365 PGNVLNRILPK 375
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 45.2 bits (107), Expect = 8e-07
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LL P RI+ QA +F E +P T + + +
Sbjct: 317 LLTMDPIKRITSEQAMQDPYFLE--DPLPTSDVFAGCQIPY---PKREFLTEEEPDDKGD 371
Query: 70 KRPGSTEDGPNPSSSSAPPPAGPTTST 96
K+ + G N ++ + P ++ T
Sbjct: 372 KKNQQQQQGNNHTNGTGHPGNQDSSHT 398
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 43.7 bits (104), Expect = 2e-06
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQ 55
LL++ +RIS A H FF L LP+ + L Q
Sbjct: 265 LLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQ 310
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 39.9 bits (94), Expect = 4e-05
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
L + P +RI+ QA +F P T P P + L Q N A+
Sbjct: 275 LFLFNPCARITATQALKMKYFSNR--PGPTPGCQLPRPN---CPVETLKEQSNPALAIKR 329
Query: 70 KRPGSTEDGPNP 81
KR + E G P
Sbjct: 330 KRTEALEQGGLP 341
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 39.1 bits (92), Expect = 8e-05
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQ 55
L P+ R++ Q H +F+ +R P N Q
Sbjct: 268 CLHMDPTERLTCEQLLHHPYFENIREI--EDLAKEHDKPAENLYFQ 311
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 39.1 bits (92), Expect = 8e-05
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPP 48
L + P+ RIS A +H +F +L L + LPP
Sbjct: 280 CLTFNPAKRISAYSALSHPYFQDLERCKENLD--SHLPP 316
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 38.7 bits (91), Expect = 1e-04
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPP 48
LL+ P R+S QA H +F E G+
Sbjct: 277 LLQLNPDMRLSAKQALHHPWFAEY--YHHASMGGSRSHH 313
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 37.9 bits (88), Expect = 2e-04
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 21/120 (17%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAI---------- 59
+L P+ RIS A H + + +P + P E+E I
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVWYDP-AEVEAPPPQIYDKQLDEREHTIEEWKELIYKE 397
Query: 60 ----QPNLNAALLPKRPGSTEDGPN------PSSSSAPPPAGPTTSTDLSETTSLHPPGA 109
+ ++ +P + N PSSS + T T S+T S A
Sbjct: 398 VMNSEEKTKNGVVKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASA 457
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 37.5 bits (88), Expect = 3e-04
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLP 41
+L Y P+ RIS A AH FF ++ P L
Sbjct: 267 MLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 37.1 bits (87), Expect = 4e-04
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 10 LLEYTPSSRISPLQACAHDFFDEL 33
+L+ P+ RI+ QA H +F E
Sbjct: 264 MLKLDPNQRITAKQALEHAYFKEN 287
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 37.0 bits (86), Expect = 5e-04
Identities = 5/38 (13%), Positives = 9/38 (23%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLP 47
+L+ P R H + + L
Sbjct: 317 MLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELY 354
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 36.9 bits (86), Expect = 6e-04
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNP 36
+LEY P+ RI+ +A H FFD L+
Sbjct: 312 MLEYDPAKRITLREALKHPFFDLLKKS 338
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 36.3 bits (85), Expect = 6e-04
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNP 36
LL+ P RIS +A H +F + P
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSDFCPP 292
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 36.1 bits (84), Expect = 8e-04
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNP 36
LL Y SR++ +A H +F +
Sbjct: 303 LLRYDHQSRLTAREAMEHPYFYTVVKD 329
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 36.0 bits (84), Expect = 0.001
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 10 LLEYTPSSRISPLQACAHDFFDEL 33
+L + P+ RIS A H +F +L
Sbjct: 284 MLCFDPNKRISARDAMNHPYFKDL 307
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 36.1 bits (84), Expect = 0.001
Identities = 10/39 (25%), Positives = 12/39 (30%), Gaps = 11/39 (28%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPP 48
+LE P RIS A H +F P
Sbjct: 302 MLEMDPVKRISAKNALEHPYFSHN-----------DFDP 329
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 35.7 bits (83), Expect = 0.001
Identities = 7/32 (21%), Positives = 8/32 (25%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLP 41
L P R + HDFF
Sbjct: 290 CLHIDPDKRPFCAELLHHDFFQMDGFAERFSQ 321
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 35.6 bits (83), Expect = 0.001
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 10 LLEYTPSSRISPLQACAHDFFDEL 33
+L + P RIS +A H + +
Sbjct: 280 MLTFNPHKRISAFRALQHSYLHKD 303
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 35.4 bits (82), Expect = 0.002
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQ 60
+L S RIS +A H + + +P + P P E+E I+
Sbjct: 302 MLVIDASKRISVDEALQHPYINVWYDP-SEAEAPPPKIPDKQLDEREHTIE 351
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 35.4 bits (82), Expect = 0.002
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 10 LLEYTPSSRISPLQACAHDFFD 31
+L+ P+ R SP + H F +
Sbjct: 339 ILQIDPTLRPSPAELLKHKFLE 360
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 34.9 bits (81), Expect = 0.002
Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA--TTLPNGNPLPPLFNFTEQELAIQ 60
+L + P+ RI+ +A H + +P P F+ ++ L +
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTK 341
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 34.4 bits (79), Expect = 0.003
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
+L + P+ RI+ + AH FF E+R
Sbjct: 380 MLVFNPNKRITINECLAHPFFKEVRIAE 407
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 34.3 bits (79), Expect = 0.004
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
LE+ P+ R++P QA H +
Sbjct: 392 CLEWDPAVRMTPGQALRHPWLRR 414
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 34.2 bits (79), Expect = 0.004
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQ 60
+LE+ P RIS QA H +F+ L +P L G F+F E +
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFDP-LDLTEGLSER--FHFDESVTDVY 347
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 33.9 bits (77), Expect = 0.006
Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 23/87 (26%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
L Y R+ PLQA +++LR T L PL
Sbjct: 347 FLRYPKEDRLLPLQAMETPEYEQLR---TELSAALPLYQ--------------------T 383
Query: 70 KRPGSTEDGPNPSSSSAPPPAGPTTST 96
+ E G PS +S P AG +
Sbjct: 384 DGEPTREGGAPPSGTSQPDEAGAAEAV 410
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 33.5 bits (77), Expect = 0.007
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
+L+Y P +RI P A H FF +
Sbjct: 356 MLDYDPKTRIQPYYALQHSFFKK 378
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 33.4 bits (77), Expect = 0.007
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPP 48
LL P+ RI A HDFF +P + G
Sbjct: 295 LLVLDPAQRIDSDDALNHDFFWS--DPMPSDLKGMLSTH 331
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 33.5 bits (77), Expect = 0.008
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 10 LLEYTPSSRISPLQACAHDFFDEL 33
+LE+ P+ RI+ +A H FF L
Sbjct: 317 MLEFDPAQRITLAEALLHPFFAGL 340
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 32.7 bits (74), Expect = 0.014
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRN 35
L Y R+ PLQA +++LR
Sbjct: 343 FLRYPKEDRLLPLQAMETPEYEQLRT 368
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 32.7 bits (74), Expect = 0.015
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRN 35
L + R+ PL+A F +L+N
Sbjct: 336 FLNFDRRRRLLPLEAMETPEFLQLQN 361
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 32.0 bits (73), Expect = 0.023
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
+L++ P+ RI+ QA H + ++R
Sbjct: 345 MLKFNPNKRITIDQALDHPYLKDVRKKK 372
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 31.1 bits (71), Expect = 0.044
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFT 53
+L RI+ QA AH +F + + P+ P+ ++ +
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHD-----PDDEPVADPYDQS 333
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 31.1 bits (71), Expect = 0.047
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
+L ++P R++ +A +H + P
Sbjct: 289 ILTFSPMDRLTAEEALSHPYMSIYSFPM 316
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 31.1 bits (71), Expect = 0.047
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
+LE R++ QA H FF+ R+P
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPFRDPE 316
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 31.1 bits (71), Expect = 0.048
Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQ 60
+L R++ +A AH +F+ L + P +F + + +
Sbjct: 291 MLVLDAEQRVTAGEALAHPYFESLHDTEDE-PQVQKYD--DSFDDVDRTLD 338
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 31.1 bits (71), Expect = 0.058
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
+L + P RI QA AH + ++ +P+
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPS 324
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 30.8 bits (70), Expect = 0.075
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
LL++ P+ RIS A H F NP
Sbjct: 312 LLQFNPNKRISANDALKHPFVSIFHNPN 339
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 30.0 bits (68), Expect = 0.14
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAI 59
+L+ P++R + + +FF PA +PP F+ L
Sbjct: 275 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDP 324
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid
cyclase fold, DDXXXXD motif, NDXXSXXXE MOT
methylisoborneol biosynthesis; HET: GST; 1.80A
{Streptomyces coelicolor} PDB: 3v1x_A*
Length = 433
Score = 29.3 bits (65), Expect = 0.20
Identities = 11/74 (14%), Positives = 20/74 (27%), Gaps = 6/74 (8%)
Query: 35 NPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLPKRPGSTEDGPNPSSSSAPPPAGPTT 94
+ + +P G+ + ++ + L P T P P AP P
Sbjct: 10 HSSGLVPRGSHMVIP------SASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPD 63
Query: 95 STDLSETTSLHPPG 108
+ G
Sbjct: 64 TVTGDSVLQRILRG 77
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 28.9 bits (65), Expect = 0.35
Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNP--LPPLFNFTEQELAIQPNLNAAL 67
L+ P RIS + AH + +P + G + + + L AA
Sbjct: 257 CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAK 316
Query: 68 LPKRPGSTEDGPNPSSSS 85
S + N SSS
Sbjct: 317 TLYEHYSGGESHNSSSSK 334
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.9 bits (64), Expect = 0.40
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 20/79 (25%)
Query: 23 QACAHDFFDELRNPATTLPNGNPLP-PLFNFTE---QELAIQPNLNAALLPK-------- 70
Q D+F+ELR+ T + L L F+ EL + +
Sbjct: 163 QGNTDDYFEELRDLYQT---YHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWL 219
Query: 71 -RPGSTEDGPNPS-SSSAP 87
P +T P+ S P
Sbjct: 220 ENPSNT---PDKDYLLSIP 235
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 28.3 bits (64), Expect = 0.41
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFT 53
+L+ P++R + + +FF PA +PP F+
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIA 292
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 27.7 bits (62), Expect = 0.86
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGN 44
L+ P RIS + AH + +P + G
Sbjct: 276 CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGT 310
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 27.0 bits (60), Expect = 1.5
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFN 51
+L + PS RI+ Q H + + + T+ + L
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMT 301
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 26.7 bits (59), Expect = 1.6
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPN--LNAAL 67
L+ P RIS + AH + +P + G + + PN L AA
Sbjct: 304 CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAK 363
Query: 68 LPKRPGSTEDGPNPSSSS 85
S + N SSS
Sbjct: 364 TLYEHYSGGESHNSSSSK 381
>1f66_C Histone H2A.Z; nucleosome, chromatin, histone variant, protein DNA
interaction, nucleoprotein, supercoiled DNA, complex
(nucleosome core/DNA); 2.60A {Homo sapiens} SCOP:
a.22.1.1
Length = 128
Score = 26.4 bits (57), Expect = 1.8
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 12/73 (16%)
Query: 3 FITWSITLLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPN 62
+ + + RI+P R+ + L L T + P+
Sbjct: 66 VLELAGNASKDLKVKRITP------------RHLQLAIRGDEELDSLIKATIAGGGVIPH 113
Query: 63 LNAALLPKRPGST 75
++ +L+ K+
Sbjct: 114 IHKSLIGKKGQQK 126
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 25.9 bits (57), Expect = 3.1
Identities = 4/21 (19%), Positives = 11/21 (52%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
++++ P R + ++ H F
Sbjct: 279 MIDHDPLKRPTAMKVLRHPLF 299
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion,
oxidoreductase, transit peptide, fatty acid metabolism,
FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Length = 404
Score = 26.0 bits (58), Expect = 3.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 44 NPLPPLFNFTEQELAIQ 60
+ PL FT++E+ I+
Sbjct: 21 QSMAPLQTFTDEEMMIK 37
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 25.7 bits (57), Expect = 3.6
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNF 52
+L P RI+ QA + A+ + + + L F
Sbjct: 268 MLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKF 310
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 25.8 bits (57), Expect = 3.7
Identities = 4/28 (14%), Positives = 9/28 (32%), Gaps = 3/28 (10%)
Query: 3 FITWSITLLEYTPSSRISPLQACAHDFF 30
I L+++ P+ R +
Sbjct: 263 IIRL---LIDHDPNKRPGARTLLNSGWL 287
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 25.8 bits (57), Expect = 3.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTL 40
+L +P R + + F++L P T+
Sbjct: 263 MLSPSPMERPEAINIIENAVFEDLDFPGKTV 293
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 25.8 bits (56), Expect = 3.8
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 6 WSITLLEYTPSSRISPLQACAHDFFDELRNP 36
W +L + R + Q F L +
Sbjct: 277 WLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 25.6 bits (56), Expect = 4.4
Identities = 5/31 (16%), Positives = 11/31 (35%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTL 40
LL R ++A H + + + +
Sbjct: 314 LLNRNVDERFDAMRALQHPWISQFSDKIYKM 344
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 25.6 bits (56), Expect = 4.8
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 3 FITWSITLLEYTPSSRISPLQACAHDFFD 31
F + + +LE P R + + H + +
Sbjct: 368 FTDFLLPMLELIPEKRATAAECLRHPWLN 396
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone
variant, chromatin, X- RAY structure, crystallography,
structural protein/DNA complex; 2.90A {Homo sapiens}
SCOP: a.22.1.1 PDB: 1u35_C
Length = 120
Score = 24.8 bits (53), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 5 TWSITLLEYTPSSRISPLQACAHDFFDELRNP---ATTLPNGNPLPPLF-NFTEQELAIQ 60
+ +LEY + + A D P + N L L T +
Sbjct: 47 VYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVL 106
Query: 61 PNLNAALLPKRPGS 74
PN++ LL K+ GS
Sbjct: 107 PNIHPELLAKKRGS 120
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
FDA; 2.10A {Mycobacterium thermoresistibile}
Length = 393
Score = 25.2 bits (56), Expect = 5.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 37 ATTLPNGNPLPPLFNFTEQELAIQ 60
+ +GNP LF E+ +A++
Sbjct: 4 SMAAWSGNPSFELFQLPEEHIALR 27
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 25.4 bits (56), Expect = 5.4
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFN 51
+L++ RIS QA H + E+ + + L
Sbjct: 275 MLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE 316
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 25.3 bits (56), Expect = 6.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 10 LLEYTPSSRISPLQACAH 27
+L + PS RI+ Q H
Sbjct: 260 MLTFHPSLRITATQCLEH 277
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 25.0 bits (55), Expect = 7.3
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNF 52
+L PS RI+ +A H + A+ + + L F
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKF 293
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 24.9 bits (55), Expect = 7.4
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPL 46
LL R+S Q H + P TLP L
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQG-CAPENTLPTPMVL 314
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 24.9 bits (55), Expect = 7.9
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
L P R + +A AH FF +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQ 289
>2zrr_A Mundticin KS immunity protein; antiparallel four-helix bundle,
antimicrobial protein; 1.80A {Enterococcus mundtii}
Length = 118
Score = 24.5 bits (53), Expect = 8.1
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLP 41
L + L+ + +L+N T++P
Sbjct: 45 LDDLEIDLGNESLRKVLGSYLKKLKNEGTSVP 76
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 24.7 bits (54), Expect = 8.1
Identities = 7/28 (25%), Positives = 9/28 (32%), Gaps = 3/28 (10%)
Query: 3 FITWSITLLEYTPSSRISPLQACAHDFF 30
I ++ P R S H FF
Sbjct: 263 LIEK---MIAMDPQKRPSAKHVLKHPFF 287
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 24.5 bits (54), Expect = 9.3
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 8/47 (17%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQE 56
LL Y P R+ H + LPP++ T+ +
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSRRV--------LPPVYQSTQSK 284
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.311 0.130 0.394
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,718,439
Number of extensions: 87874
Number of successful extensions: 266
Number of sequences better than 10.0: 1
Number of HSP's gapped: 262
Number of HSP's successfully gapped: 80
Length of query: 113
Length of database: 6,701,793
Length adjustment: 77
Effective length of query: 36
Effective length of database: 4,551,876
Effective search space: 163867536
Effective search space used: 163867536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (23.5 bits)