RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10215
(113 letters)
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 80.2 bits (197), Expect = 7e-20
Identities = 37/61 (60%), Positives = 45/61 (73%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LLEYTP++R++PL+ACAH FFDELR+P LPNG P LFNFT QEL+ P L L+P
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIP 345
Query: 70 K 70
Sbjct: 346 P 346
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 355
Score = 46.1 bits (108), Expect = 1e-07
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQ 60
+L P+ RIS A H + + +PA + P E+E I+
Sbjct: 294 MLVIDPAKRISVDDALQHPYINVWYDPA-EVEAPPPQIYDKQLDEREHTIE 343
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 362
Score = 42.7 bits (99), Expect = 2e-06
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 10 LLEYTPSSRISPLQACAHDFF------DELRNPATTL-PNGNPLPPLF 50
+L+ P R H + +E+R P L +G+ +P F
Sbjct: 311 MLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 358
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 348
Score = 42.2 bits (98), Expect = 3e-06
Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQE 56
+L RI+ QA AH +F + + P+ P+ ++ + +
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHD-----PDDEPVADPYDQSFES 325
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 39.8 bits (92), Expect = 2e-05
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQEL 57
+L R++ +A AH +F+ L + P F+ ++ L
Sbjct: 284 MLVLDAEQRVTAGEALAHPYFESLHDT-EDEPQVQKYDDSFDDVDRTL 330
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 345
Score = 39.4 bits (91), Expect = 2e-05
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQ 60
+L + P RI QA AH + ++ +P + P P F+ +L +
Sbjct: 278 MLTFNPHKRIEVEQALAHPYLEQYYDP-SDEPI-AEAPFKFDMELDDLPKE 326
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 39.1 bits (90), Expect = 4e-05
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPN 42
+L Y P+ RIS A AH FF ++ P +P+
Sbjct: 266 MLHYDPNKRISAKAALAHPFFQDVTKP---VPH 295
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 292
Score = 38.4 bits (88), Expect = 5e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNP 36
LL+ P RIS +A H +F + P
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSDFCPP 292
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 305
Score = 36.8 bits (84), Expect = 2e-04
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRN 35
L + P+ RIS A +H +F +L
Sbjct: 276 CLTFNPAKRISAYSALSHPYFQDLER 301
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium
falciparum) [TaxId: 5833]}
Length = 286
Score = 34.9 bits (79), Expect = 0.001
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
+L+ P+ RI+ QA H +F E
Sbjct: 264 MLKLDPNQRITAKQALEHAYFKE 286
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 34.4 bits (78), Expect = 0.001
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
L + P +RI+ QA +F P
Sbjct: 263 LFLFNPCARITATQALKMKYFSNRPGPT 290
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit
{Rattus norvegicus [TaxId: 10116]}
Length = 328
Score = 34.0 bits (77), Expect = 0.002
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELR 34
LL Y SR++ +A H +F +
Sbjct: 302 LLRYDHQSRLTAREAMEHPYFYTVV 326
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 318
Score = 33.7 bits (76), Expect = 0.003
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPA 37
LL P+ RI A HDFF P+
Sbjct: 288 LLVLDPAQRIDSDDALNHDFFWSDPMPS 315
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 321
Score = 32.7 bits (74), Expect = 0.005
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LL SR++ +A H + + +T + L + I+ +LN +
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVST----KVIRTLKHRRYYHTLIKKDLNMVVSA 296
Query: 70 KR---PGSTEDGPNPSSSSAPPPA 90
R G+ S + +
Sbjct: 297 ARISCGGAIRSQKGVSVAKVKVAS 320
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare
(Aplysia californica), twk43 [TaxId: 6500]}
Length = 352
Score = 32.7 bits (74), Expect = 0.006
Identities = 12/72 (16%), Positives = 25/72 (34%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LL+ P R++ A H + + T+ + + +++ A P A+
Sbjct: 266 LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGR 325
Query: 70 KRPGSTEDGPNP 81
S+ P
Sbjct: 326 IANFSSLRKHRP 337
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain
{Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Length = 350
Score = 32.4 bits (73), Expect = 0.007
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLPNGNPLPPLFNFTEQELAIQPNLNAALLP 69
LL P++R++ QA H + P + P +T+ +I+ +A P
Sbjct: 263 LLLADPNTRMTIHQALEHPWLTPGNAPGR-----DSQIPSSRYTKIRDSIKTKYDAWPEP 317
Query: 70 KRPGSTEDGPNPSSSSAP 87
P + P
Sbjct: 318 LPPLGRISNYSSLRKHRP 335
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 32.4 bits (73), Expect = 0.007
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 10 LLEYTPSSRISPLQACAHDFF-DELRNPATTLPNGNPLPPLFNFTEQ 55
LL+ P+ R++ + H + + P T L L E
Sbjct: 255 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 301
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 31.6 bits (71), Expect = 0.013
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
L P R + +A AH FF +
Sbjct: 253 FLVVQPQKRYTAEEALAHPFFQQ 275
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein
kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 31.6 bits (71), Expect = 0.013
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATT 39
L PS R + + H + ++ P T
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQDVLLPQET 267
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 30.8 bits (69), Expect = 0.028
Identities = 6/21 (28%), Positives = 7/21 (33%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
L P+ R Q H F
Sbjct: 281 CLIKNPAERADLKQLMVHAFI 301
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 309
Score = 29.6 bits (66), Expect = 0.058
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLP 41
L+ P R + H F R P +
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 281
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 29.2 bits (65), Expect = 0.084
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 10 LLEYTPSSRISPLQACAHDFFDE 32
+L PS+RI+ ++++
Sbjct: 243 ILVENPSARITIPDIKKDRWYNK 265
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human
(Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 28.6 bits (63), Expect = 0.15
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 10 LLEYTPSSRISPLQACAHDFF-----DELRNPATTLPN 42
LL P R++ + H + + + A + P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 307
Score = 28.5 bits (63), Expect = 0.16
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
L+E P R + QA H +
Sbjct: 247 LMEKDPEKRFTCEQALQHPWI 267
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 28.4 bits (63), Expect = 0.19
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 10 LLEYTPSSRISPLQACAHDFFDELRNPATTLP 41
L+ R S + H F + ++ P
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein
kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 28.0 bits (62), Expect = 0.25
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
LE +R + Q H F
Sbjct: 252 CLEKNVDARWTTSQLLQHPFV 272
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 263
Score = 27.2 bits (60), Expect = 0.45
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
LL++ PS R + H +
Sbjct: 238 LLKHNPSQRPMLREVLEHPWI 258
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 270
Score = 25.3 bits (55), Expect = 1.6
Identities = 5/21 (23%), Positives = 6/21 (28%)
Query: 10 LLEYTPSSRISPLQACAHDFF 30
+ R S H FF
Sbjct: 249 CIRQNKDERYSIKDLLNHAFF 269
>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus
thermophilus [TaxId: 274]}
Length = 299
Score = 24.9 bits (54), Expect = 2.7
Identities = 10/38 (26%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 71 RPGSTEDGPNPSSSSAPPPAGPTTSTDLSETTSLHPPG 108
+ S EDG PP GP D + P
Sbjct: 249 KGASPEDGTEVVVVDGPPTGGP--VFDAGHDAAEFAPE 284
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 337
Score = 24.7 bits (53), Expect = 3.6
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 7/44 (15%)
Query: 10 LLEYTPSSRISPL-----QACAHDFFDELRNPATTLPNGNPLPP 48
LL+ P R+ + H FF + + LPP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINW--QDVVQKKLLPP 280
>d1opoa_ b.121.4.7 (A:) Carmovirus coat protein {CarMV (Carnation
mottle virus) [TaxId: 11986]}
Length = 267
Score = 23.3 bits (50), Expect = 8.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 2 IFITWSITLLEYTPSSRIS 20
+FI ++I L + T +++IS
Sbjct: 150 LFIQYTIVLSDPTKTAKIS 168
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.311 0.130 0.394
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 426,506
Number of extensions: 17660
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 37
Length of query: 113
Length of database: 2,407,596
Length adjustment: 71
Effective length of query: 42
Effective length of database: 1,432,766
Effective search space: 60176172
Effective search space used: 60176172
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.5 bits)