Query psy1022
Match_columns 245
No_of_seqs 253 out of 1328
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 20:53:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fsh_A Dishevelled-1; three-he 99.8 7.2E-21 2.5E-25 146.5 3.7 53 188-240 53-105 (105)
2 3cbz_A Dishevelled-2; PDZ doma 99.7 8.9E-18 3E-22 128.9 11.1 100 33-132 3-102 (108)
3 3gge_A PDZ domain-containing p 99.7 6.3E-17 2.1E-21 122.2 12.9 85 34-124 4-88 (95)
4 1r6j_A Syntenin 1; PDZ, membra 99.7 1E-16 3.5E-21 117.9 11.3 78 35-125 4-81 (82)
5 1wi4_A Synip, syntaxin binding 99.7 5.4E-16 1.8E-20 119.3 13.5 91 33-125 13-104 (109)
6 3b76_A E3 ubiquitin-protein li 99.7 7.6E-16 2.6E-20 120.3 13.1 89 34-125 23-112 (118)
7 2d92_A INAD-like protein; PDZ 99.7 1.2E-15 4.1E-20 116.8 12.6 92 31-125 11-104 (108)
8 1v62_A KIAA1719 protein; struc 99.7 1.9E-15 6.6E-20 117.4 13.3 91 33-127 13-103 (117)
9 2vwr_A Ligand of NUMB protein 99.6 3.2E-15 1.1E-19 111.4 13.5 87 33-125 1-88 (95)
10 2dmz_A INAD-like protein; PDZ 99.6 6.7E-15 2.3E-19 115.8 16.0 100 25-127 5-107 (129)
11 1i16_A Interleukin 16, LCF; cy 99.6 2.2E-15 7.6E-20 119.2 13.1 92 31-125 25-117 (130)
12 2ehr_A INAD-like protein; PDZ 99.6 2.2E-15 7.7E-20 116.6 12.8 95 30-127 10-111 (117)
13 2qg1_A Multiple PDZ domain pro 99.6 2.3E-15 7.9E-20 111.4 12.3 86 34-125 3-88 (92)
14 1wha_A KIAA0147 protein, scrib 99.6 3E-15 1E-19 113.7 12.3 96 30-129 2-101 (105)
15 2iwo_A Multiple PDZ domain pro 99.6 8.5E-16 2.9E-20 120.2 9.4 91 33-126 22-113 (120)
16 1kwa_A Hcask/LIN-2 protein; PD 99.6 2.1E-15 7.1E-20 111.5 11.1 82 36-124 2-83 (88)
17 2awx_A Synapse associated prot 99.6 3.6E-15 1.2E-19 113.3 12.6 88 34-125 2-92 (105)
18 2fe5_A Presynaptic protein SAP 99.6 4E-15 1.4E-19 110.4 12.5 88 33-124 1-91 (94)
19 2dc2_A GOPC, golgi associated 99.6 2E-15 6.9E-20 114.7 11.1 89 34-127 8-96 (103)
20 2i1n_A Discs, large homolog 3; 99.6 9E-15 3.1E-19 110.3 14.5 91 33-127 2-95 (102)
21 1wi2_A Riken cDNA 2700099C19; 99.6 7.8E-15 2.7E-19 111.4 13.9 94 25-125 5-98 (104)
22 3o46_A Maguk P55 subfamily mem 99.6 3.9E-15 1.3E-19 110.6 11.6 84 35-125 4-87 (93)
23 2byg_A Channel associated prot 99.6 5.6E-15 1.9E-19 114.9 12.9 88 34-125 23-113 (117)
24 1wf8_A Neurabin-I; PDZ domain, 99.6 7.2E-15 2.5E-19 112.0 13.3 92 33-128 7-102 (107)
25 2dlu_A INAD-like protein; PDZ 99.6 1.2E-14 4E-19 111.4 14.4 96 22-125 2-97 (111)
26 2db5_A INAD-like protein; PDZ 99.6 4.7E-15 1.6E-19 116.6 12.2 90 33-125 23-114 (128)
27 1ueq_A Membrane associated gua 99.6 3.2E-14 1.1E-18 111.3 16.7 92 30-125 14-105 (123)
28 1uju_A Scribble; PDZ domain, c 99.6 1.2E-15 4.2E-20 117.0 8.3 94 34-130 8-108 (111)
29 1uhp_A Hypothetical protein KI 99.6 1.1E-14 3.9E-19 110.9 13.5 90 32-125 5-100 (107)
30 2la8_A Inactivation-NO-after-p 99.6 6.5E-15 2.2E-19 112.8 12.0 84 34-125 1-84 (106)
31 4e34_A Golgi-associated PDZ an 99.6 4.4E-15 1.5E-19 108.8 10.5 85 35-124 2-86 (87)
32 1qav_A Alpha-1 syntrophin (res 99.6 5.8E-15 2E-19 108.9 11.1 86 34-124 3-88 (90)
33 1uep_A Membrane associated gua 99.6 5.8E-15 2E-19 111.9 11.3 94 32-129 6-99 (103)
34 1x6d_A Interleukin-16; PDZ dom 99.6 9.3E-15 3.2E-19 113.4 12.5 92 31-125 11-102 (119)
35 3nfk_A Tyrosine-protein phosph 99.6 3.9E-15 1.3E-19 113.3 10.1 90 33-124 15-106 (107)
36 2jik_A Synaptojanin-2 binding 99.6 2.1E-14 7E-19 108.1 14.0 90 33-126 5-97 (101)
37 3ml6_A Chimeric complex betwee 99.6 2.4E-16 8.3E-21 146.1 4.0 56 188-243 41-96 (385)
38 1d5g_A Human phosphatase HPTP1 99.6 1.5E-14 5.1E-19 107.8 13.1 88 34-125 4-92 (96)
39 2jil_A GRIP1 protein, glutamat 99.6 1.3E-14 4.5E-19 108.3 12.6 90 33-126 1-92 (97)
40 3egg_C Spinophilin; PP1, serin 99.6 7.2E-15 2.5E-19 121.9 12.2 88 33-124 78-169 (170)
41 1wg6_A Hypothetical protein (r 99.6 7.1E-15 2.4E-19 115.9 11.4 94 34-127 24-123 (127)
42 3hpk_A Protein interacting wit 99.6 1.7E-14 5.8E-19 113.0 13.4 88 33-125 17-104 (125)
43 2csj_A TJP2 protein; PDZ domai 99.6 1.1E-14 3.9E-19 112.7 12.1 89 32-125 11-103 (117)
44 1n7e_A AMPA receptor interacti 99.6 2.5E-14 8.5E-19 107.0 13.6 90 33-128 3-92 (97)
45 3l4f_D SH3 and multiple ankyri 99.6 1.5E-14 5E-19 115.0 12.3 92 30-125 22-123 (132)
46 1x5q_A LAP4 protein; PDZ domai 99.6 5.4E-14 1.8E-18 107.5 14.9 99 22-125 2-104 (110)
47 2fne_A Multiple PDZ domain pro 99.6 8.4E-15 2.9E-19 114.0 10.4 88 34-125 24-112 (117)
48 1ufx_A KIAA1526 protein; PDZ d 99.6 1.2E-14 4.3E-19 110.6 11.1 89 36-126 7-97 (103)
49 1ujd_A KIAA0559 protein; PDZ d 99.6 1.7E-14 6E-19 111.8 12.1 90 33-125 10-108 (117)
50 2ejy_A 55 kDa erythrocyte memb 99.6 1.1E-14 3.9E-19 110.1 10.6 83 36-125 13-95 (97)
51 4amh_A Disks large homolog 1; 99.6 9.9E-15 3.4E-19 111.4 10.4 84 40-126 6-92 (106)
52 1m5z_A GRIP, AMPA receptor int 99.6 3.7E-14 1.3E-18 104.6 13.1 85 33-124 4-89 (91)
53 2cs5_A Tyrosine-protein phosph 99.6 6.5E-15 2.2E-19 114.3 9.4 101 23-125 3-105 (119)
54 2yt7_A Amyloid beta A4 precurs 99.6 2.5E-14 8.6E-19 108.1 12.3 91 34-125 8-98 (101)
55 2q9v_A Membrane-associated gua 99.6 1.8E-14 6.3E-19 106.1 11.1 86 35-124 2-87 (90)
56 1va8_A Maguk P55 subfamily mem 99.6 4.4E-14 1.5E-18 108.9 13.7 84 34-125 24-107 (113)
57 2djt_A Unnamed protein product 99.6 2.3E-14 7.8E-19 108.4 11.9 89 33-125 9-97 (104)
58 2eno_A Synaptojanin-2-binding 99.6 6.5E-14 2.2E-18 108.9 14.3 89 33-125 15-106 (120)
59 1wfg_A Regulating synaptic mem 99.6 3.5E-14 1.2E-18 112.5 13.0 91 34-125 26-126 (131)
60 2o2t_A Multiple PDZ domain pro 99.6 1.1E-14 3.7E-19 112.6 9.6 90 33-125 18-109 (117)
61 3i4w_A Disks large homolog 4; 99.6 3.6E-14 1.2E-18 107.1 12.3 87 31-124 7-93 (104)
62 2jre_A C60-1 PDZ domain peptid 99.6 6.4E-14 2.2E-18 106.7 13.7 91 32-125 9-103 (108)
63 3axa_A Afadin, nectin-3, prote 99.6 2.3E-14 7.7E-19 108.9 11.2 89 32-125 8-97 (106)
64 2dkr_A LIN-7 homolog B; LIN-7B 99.6 2.6E-14 9E-19 105.7 11.2 85 34-124 4-88 (93)
65 1nf3_C PAR-6B; semi-CRIB motif 99.6 9.4E-15 3.2E-19 115.2 9.2 92 32-126 26-125 (128)
66 1um1_A KIAA1849 protein, RSGI 99.6 5.2E-14 1.8E-18 107.6 13.0 89 33-125 6-95 (110)
67 2ego_A General receptor for ph 99.6 3.7E-14 1.3E-18 106.0 11.7 87 34-124 3-94 (96)
68 1ihj_A INAD; intermolecular di 99.6 4.7E-14 1.6E-18 105.5 12.1 89 34-125 4-96 (98)
69 2h2b_A Tight junction protein 99.6 1.2E-13 4.2E-18 104.9 14.6 92 30-126 2-97 (107)
70 2daz_A INAD-like protein; PDZ 99.6 5.6E-14 1.9E-18 110.0 13.0 88 33-125 23-110 (124)
71 2qkv_A Inactivation-NO-after-p 99.6 3E-14 1E-18 106.7 10.8 84 33-124 6-89 (96)
72 1g9o_A NHE-RF; PDZ domain, com 99.5 8E-14 2.7E-18 102.8 12.7 83 34-124 2-84 (91)
73 2i04_A Membrane-associated gua 99.5 8.2E-14 2.8E-18 101.5 12.3 84 37-124 2-85 (85)
74 1uew_A Membrane associated gua 99.5 7.8E-14 2.7E-18 107.5 12.8 93 30-126 5-103 (114)
75 2g5m_B Neurabin-2; spinophilin 99.5 3.4E-14 1.2E-18 109.1 10.8 89 33-125 2-94 (113)
76 2opg_A Multiple PDZ domain pro 99.5 1.4E-13 4.7E-18 102.9 13.8 86 35-125 4-89 (98)
77 2kpk_A Membrane-associated gua 99.5 1.7E-13 5.9E-18 108.0 15.0 90 32-125 15-104 (129)
78 2f5y_A Regulator of G-protein 99.5 7.9E-14 2.7E-18 103.2 12.1 81 34-125 2-82 (91)
79 2he4_A Na(+)/H(+) exchange reg 99.5 7.9E-14 2.7E-18 102.8 12.0 83 34-124 3-85 (90)
80 1z87_A Alpha-1-syntrophin; pro 99.5 2.1E-14 7.1E-19 126.9 10.4 90 33-127 75-164 (263)
81 1q7x_A PDZ2B domain of PTP-BAS 99.5 3.8E-14 1.3E-18 108.0 10.4 88 34-125 8-101 (108)
82 2r4h_A Membrane-associated gua 99.5 7.5E-14 2.6E-18 107.5 12.1 86 33-124 22-107 (112)
83 1um7_A Synapse-associated prot 99.5 2.8E-14 9.5E-19 109.3 9.3 95 23-124 3-97 (113)
84 1wfv_A Membrane associated gua 99.5 2.1E-14 7.3E-19 108.2 8.3 88 33-126 9-96 (103)
85 2q3g_A PDZ and LIM domain prot 99.5 1E-13 3.5E-18 101.9 11.8 84 34-125 2-85 (89)
86 2fcf_A Multiple PDZ domain pro 99.5 1.3E-13 4.4E-18 104.0 12.4 90 33-125 2-98 (103)
87 2pa1_A PDZ and LIM domain prot 99.5 9.7E-14 3.3E-18 101.6 11.4 82 38-125 3-84 (87)
88 1v6b_A Harmonin isoform A1; st 99.5 9.1E-14 3.1E-18 108.1 11.8 88 35-125 18-106 (118)
89 2uzc_A Human pdlim5, PDZ and L 99.5 6.9E-14 2.4E-18 102.5 10.5 83 34-124 2-84 (88)
90 1q3o_A Shank1; PDZ, GKAP, pept 99.5 1.7E-13 5.6E-18 104.7 12.7 88 34-125 6-103 (109)
91 2v90_A PDZ domain-containing p 99.5 1.4E-13 4.7E-18 102.6 11.5 87 34-125 2-88 (96)
92 3qe1_A Sorting nexin-27, G pro 99.5 2.7E-13 9.1E-18 103.0 13.2 88 34-126 5-102 (107)
93 2koj_A Partitioning defective 99.5 7.3E-13 2.5E-17 101.2 15.4 91 33-125 9-100 (111)
94 2e7k_A Maguk P55 subfamily mem 99.5 6.2E-14 2.1E-18 104.1 8.7 83 35-126 6-88 (91)
95 1v5q_A GRIP1 homolog, glutamat 99.5 4.3E-13 1.5E-17 104.6 13.8 95 30-125 10-106 (122)
96 3e17_A Tight junction protein 99.5 1.7E-13 5.7E-18 101.2 10.8 76 38-124 3-79 (88)
97 3ngh_A PDZ domain-containing p 99.5 1.8E-13 6.1E-18 103.8 10.9 82 36-124 2-83 (106)
98 2w4f_A Protein LAP4; structura 99.5 4.5E-13 1.5E-17 99.8 12.9 88 33-125 1-92 (97)
99 2d90_A PDZ domain containing p 99.5 2.4E-13 8.1E-18 102.6 11.4 85 33-125 4-88 (102)
100 2gzv_A PRKCA-binding protein; 99.5 3.1E-13 1.1E-17 104.6 12.3 87 33-124 22-108 (114)
101 2edz_A PDZ domain-containing p 99.5 2.5E-13 8.5E-18 104.6 11.5 88 31-125 9-96 (114)
102 2eeh_A PDZ domain-containing p 99.5 5.8E-13 2E-17 100.1 13.2 89 31-126 6-94 (100)
103 1mfg_A ERB-B2 interacting prot 99.5 4.1E-13 1.4E-17 99.9 12.1 83 36-125 4-92 (95)
104 3gsl_A Disks large homolog 4; 99.5 4.2E-13 1.4E-17 111.1 13.5 91 32-126 2-95 (196)
105 2vsp_A PDZ domain-containing p 99.5 8E-14 2.7E-18 103.0 8.0 83 35-125 3-85 (91)
106 3r68_A Na(+)/H(+) exchange reg 99.5 2.8E-13 9.6E-18 100.5 10.8 82 35-124 5-86 (95)
107 1n7t_A 99-MER peptide of densi 99.5 2.3E-13 7.9E-18 102.8 10.4 86 32-124 8-99 (103)
108 3soe_A Membrane-associated gua 99.5 4.7E-13 1.6E-17 104.0 12.3 86 33-128 10-95 (113)
109 1qau_A Neuronal nitric oxide s 99.5 6.1E-13 2.1E-17 101.8 12.8 86 35-125 1-86 (112)
110 2iwn_A Multiple PDZ domain pro 99.5 6.9E-13 2.3E-17 98.4 12.6 88 34-125 3-92 (97)
111 2iwq_A Multiple PDZ domain pro 99.5 3.9E-13 1.3E-17 105.5 11.8 88 34-124 23-117 (123)
112 1tp5_A Presynaptic density pro 99.5 4.6E-13 1.6E-17 103.7 11.8 86 33-125 12-97 (119)
113 1rgw_A ZAsp protein; PDZ, cyph 99.5 2.2E-13 7.6E-18 99.1 9.4 81 36-124 2-82 (85)
114 2eei_A PDZ domain-containing p 99.5 2.4E-13 8.4E-18 103.0 10.0 85 33-125 6-90 (106)
115 2z17_A Pleckstrin homology SEC 99.5 2.5E-13 8.6E-18 102.9 9.9 85 34-122 14-103 (104)
116 2kom_A Partitioning defective 99.5 1.6E-12 5.6E-17 101.4 14.5 99 20-124 19-118 (121)
117 2dls_A PDZ-rhogef, RHO guanine 99.5 8.5E-13 2.9E-17 98.0 12.3 81 33-125 6-86 (93)
118 3bpu_A Membrane-associated gua 99.5 5.9E-13 2E-17 97.6 11.2 84 34-125 2-85 (88)
119 2edp_A Fragment, shroom family 99.4 2.9E-13 9.9E-18 102.0 9.1 84 34-125 10-93 (100)
120 2dm8_A INAD-like protein; PDZ 99.4 8.3E-13 2.8E-17 101.7 11.8 86 35-125 17-102 (116)
121 2kv8_A RGS12, regulator of G-p 99.4 1.3E-13 4.4E-18 100.1 6.8 79 35-124 2-80 (83)
122 2eeg_A PDZ and LIM domain prot 99.4 6.1E-13 2.1E-17 98.9 10.5 84 34-125 7-90 (94)
123 1whd_A RGS3, regulator of G-pr 99.4 5.6E-13 1.9E-17 100.4 9.9 84 31-125 11-94 (100)
124 2pkt_A PDZ and LIM domain prot 99.4 1.2E-12 4E-17 96.6 11.2 83 35-125 3-85 (91)
125 2edv_A FERM and PDZ domain-con 99.4 3.3E-13 1.1E-17 101.0 8.1 84 34-128 7-91 (96)
126 1vb7_A PDZ and LIM domain 2; P 99.4 3E-13 1E-17 100.6 7.6 81 39-125 8-88 (94)
127 3k1r_A Harmonin; protein-prote 99.4 6.9E-13 2.3E-17 111.3 10.6 86 33-125 82-167 (192)
128 3kzd_A TIAM-1, T-lymphoma inva 99.4 2E-12 6.9E-17 97.3 11.8 86 32-124 3-90 (94)
129 1wf7_A Enigma homologue protei 99.4 5.4E-13 1.9E-17 100.8 8.3 84 34-125 4-87 (103)
130 1x5n_A Harmonin; PDZ domain, u 99.4 2.1E-12 7.1E-17 99.2 11.4 86 32-124 12-97 (114)
131 3sfj_A TAX1-binding protein 3; 99.4 2.4E-12 8.2E-17 97.1 11.4 76 46-124 18-103 (104)
132 2jxo_A Ezrin-radixin-moesin-bi 99.4 2.4E-12 8.4E-17 96.1 11.1 83 35-124 9-91 (98)
133 3r0h_A INAD, inactivation-NO-a 99.4 4.5E-12 1.5E-16 106.3 13.8 87 35-125 18-107 (206)
134 2lob_A Golgi-associated PDZ an 99.1 2.5E-14 8.6E-19 110.6 0.0 90 29-123 21-110 (112)
135 1uez_A KIAA1526 protein; PDZ d 99.4 1.3E-12 4.5E-17 98.2 8.9 85 34-125 7-92 (101)
136 2vsv_A Rhophilin-2; scaffold p 99.4 2.7E-12 9.3E-17 98.9 10.5 81 35-126 23-104 (109)
137 1wif_A RSGI RUH-020, riken cDN 99.4 2.4E-12 8.2E-17 101.8 9.6 84 35-125 27-110 (126)
138 1ujv_A Membrane associated gua 99.4 8.9E-12 3E-16 93.3 12.2 85 33-127 8-92 (96)
139 3khf_A Microtubule-associated 99.4 4.7E-12 1.6E-16 94.8 10.6 83 38-125 5-92 (99)
140 1b8q_A Protein (neuronal nitri 99.4 1.8E-12 6E-17 101.6 8.6 88 33-125 6-93 (127)
141 2xkx_A Disks large homolog 4; 99.4 3.8E-12 1.3E-16 126.3 13.1 92 31-126 55-149 (721)
142 2qt5_A Glutamate receptor-inte 99.4 6.9E-12 2.4E-16 105.1 12.5 87 35-126 7-93 (200)
143 2kjd_A Sodium/hydrogen exchang 99.3 8.5E-12 2.9E-16 97.6 11.3 85 33-124 7-91 (128)
144 1p1d_A PDZ45, glutamate recept 99.3 8.8E-12 3E-16 104.3 12.1 93 33-126 4-98 (196)
145 3gsl_A Disks large homolog 4; 99.3 9.2E-12 3.1E-16 102.9 12.1 87 35-125 100-189 (196)
146 3r0h_A INAD, inactivation-NO-a 99.3 6.8E-12 2.3E-16 105.2 11.1 84 34-125 112-195 (206)
147 2d8i_A T-cell lymphoma invasio 99.3 1.4E-11 4.7E-16 95.6 11.6 85 34-125 14-100 (114)
148 1uf1_A KIAA1526 protein; PDZ d 99.3 4.8E-11 1.6E-15 93.5 14.4 84 35-125 20-103 (128)
149 2yuy_A RHO GTPase activating p 99.3 1.5E-12 5.3E-17 102.1 5.8 86 35-125 8-119 (126)
150 2qbw_A PDZ-fibronectin fusion 99.3 8.9E-12 3.1E-16 103.7 10.8 73 47-124 2-80 (195)
151 1uit_A Human discs large 5 pro 99.3 1.2E-11 4.2E-16 95.4 10.4 82 35-125 19-100 (117)
152 1y7n_A Amyloid beta A4 precurs 99.3 2.3E-11 7.8E-16 90.3 11.4 69 43-124 20-88 (90)
153 2vz5_A TAX1-binding protein 3; 99.3 1.6E-11 5.6E-16 98.1 11.3 92 31-125 19-123 (139)
154 3shw_A Tight junction protein 99.3 1.2E-11 4.2E-16 117.1 11.4 83 35-125 1-83 (468)
155 3tsv_A Tight junction protein 99.3 1.8E-11 6.3E-16 96.0 10.1 82 35-124 29-110 (124)
156 2eaq_A LIM domain only protein 99.3 5.2E-11 1.8E-15 87.4 11.4 84 35-125 3-88 (90)
157 1wh1_A KIAA1095 protein; PDZ d 99.2 8E-11 2.7E-15 91.9 12.2 92 31-126 15-107 (124)
158 1v5l_A PDZ and LIM domain 3; a 99.2 3.1E-12 1.1E-16 96.7 3.8 82 36-125 6-87 (103)
159 2rcz_A Tight junction protein 99.2 1.3E-10 4.3E-15 83.1 11.3 74 40-124 6-79 (81)
160 3cyy_A Tight junction protein 99.2 1.3E-10 4.5E-15 85.3 11.1 79 36-125 3-82 (92)
161 1vae_A Rhophilin 2, rhophilin, 99.2 2.1E-11 7.1E-16 94.0 6.8 81 35-125 15-95 (111)
162 2krg_A Na(+)/H(+) exchange reg 99.2 8.3E-11 2.8E-15 100.9 11.2 84 33-124 7-91 (216)
163 3tsz_A Tight junction protein 99.2 7E-11 2.4E-15 109.6 11.5 84 34-125 8-91 (391)
164 3qik_A Phosphatidylinositol 3, 99.2 1.5E-10 5E-15 88.1 9.8 82 36-124 18-99 (101)
165 2yub_A LIMK-2, LIM domain kina 99.2 3.4E-10 1.2E-14 88.1 12.2 90 33-126 13-105 (118)
166 3suz_A Amyloid beta A4 precurs 99.2 2.1E-11 7E-16 113.0 6.0 91 34-125 203-293 (388)
167 1w9e_A Syntenin 1; cell adhesi 99.2 2.3E-10 7.9E-15 93.3 11.6 83 34-124 3-85 (166)
168 2qt5_A Glutamate receptor-inte 99.2 3.2E-10 1.1E-14 94.8 12.4 87 35-125 106-194 (200)
169 2xkx_A Disks large homolog 4; 99.1 2.8E-10 9.7E-15 112.9 13.5 84 35-125 307-390 (721)
170 1p1d_A PDZ45, glutamate recept 99.1 4.8E-10 1.7E-14 93.6 11.7 86 37-125 109-194 (196)
171 1v3f_A Pleckstrin 2; three-hel 98.9 4.5E-10 1.6E-14 88.0 4.3 54 188-242 40-106 (120)
172 2pbi_A Regulator of G-protein 98.9 7.7E-10 2.6E-14 103.6 4.1 56 183-240 48-107 (424)
173 1uhw_A Pleckstrin; three-helix 98.6 2.5E-08 8.6E-13 76.7 3.3 52 188-240 40-103 (109)
174 1w9e_A Syntenin 1; cell adhesi 98.6 5.6E-07 1.9E-11 73.0 11.4 76 36-124 89-164 (166)
175 3suz_A Amyloid beta A4 precurs 98.5 1E-08 3.5E-13 94.8 0.0 66 46-124 307-372 (388)
176 1fc6_A Photosystem II D1 prote 98.5 3.8E-07 1.3E-11 84.0 10.4 75 45-125 83-158 (388)
177 2cso_A Pleckstrin; DEP domain, 98.5 5.4E-08 1.9E-12 76.7 3.5 53 188-241 50-114 (127)
178 2pzd_A Serine protease HTRA2; 98.5 7.5E-07 2.6E-11 67.7 9.1 57 62-125 34-90 (113)
179 3i18_A LMO2051 protein; alpha- 98.4 9.2E-07 3.1E-11 66.1 9.0 58 62-124 6-63 (100)
180 2kl1_A YLBL protein; structure 98.4 4.3E-07 1.5E-11 67.3 6.8 59 62-125 4-62 (94)
181 2kjp_A Uncharacterized protein 98.4 1.7E-07 5.8E-12 69.3 3.2 57 64-125 2-58 (91)
182 2p3w_A Probable serine proteas 98.3 2.2E-06 7.6E-11 65.0 9.0 57 62-125 34-90 (112)
183 2l97_A HTRA, putative serine p 98.3 2.6E-06 9E-11 67.1 8.8 59 62-125 56-114 (134)
184 3rle_A Golgi reassembly-stacki 98.3 1.2E-06 4.1E-11 74.0 7.2 61 61-125 14-75 (209)
185 3id1_A Regulator of sigma E pr 98.3 2.7E-06 9.3E-11 63.1 7.8 56 66-125 5-60 (95)
186 2zpm_A Regulator of sigma E pr 98.3 2E-06 6.7E-11 62.7 6.6 57 64-125 5-61 (91)
187 2i6v_A General secretion pathw 98.2 2.7E-06 9.1E-11 61.9 6.7 59 63-125 19-77 (87)
188 1y8t_A Hypothetical protein RV 98.1 8.7E-06 3E-10 72.9 9.8 59 62-124 241-299 (324)
189 3k50_A Putative S41 protease; 98.1 2.2E-06 7.5E-11 79.7 5.8 75 46-127 73-147 (403)
190 4fgm_A Aminopeptidase N family 98.1 5E-06 1.7E-10 80.9 7.9 69 47-125 485-553 (597)
191 3rle_A Golgi reassembly-stacki 98.1 9.6E-06 3.3E-10 68.4 8.4 73 47-125 95-169 (209)
192 3stj_A Protease DEGQ; serine p 98.1 1E-05 3.6E-10 73.4 9.1 60 62-125 262-321 (345)
193 1te0_A Protease DEGS; two doma 98.1 1.4E-05 4.9E-10 71.4 9.7 60 62-125 243-302 (318)
194 4a8c_A Periplasmic PH-dependen 98.0 1.4E-05 4.7E-10 74.7 8.7 58 62-125 362-419 (436)
195 2hga_A Conserved protein MTH13 98.0 2.2E-05 7.6E-10 61.3 8.0 57 62-124 24-80 (125)
196 2i4s_A General secretion pathw 98.0 1.8E-05 6.2E-10 59.5 7.2 58 64-125 38-95 (105)
197 4a8c_A Periplasmic PH-dependen 98.0 1.4E-05 4.7E-10 74.8 7.6 60 62-125 262-321 (436)
198 2ysr_A DEP domain-containing p 97.9 4.3E-06 1.5E-10 63.7 3.0 51 188-238 43-103 (105)
199 3pv2_A DEGQ; trypsin fold, PDZ 97.9 3.8E-05 1.3E-09 72.1 9.8 59 63-125 282-340 (451)
200 1lcy_A HTRA2 serine protease; 97.9 3.3E-05 1.1E-09 69.4 8.8 57 62-125 255-311 (325)
201 3pv2_A DEGQ; trypsin fold, PDZ 97.9 2E-05 6.8E-10 74.1 7.4 57 63-125 386-442 (451)
202 3qo6_A Protease DO-like 1, chl 97.9 3E-05 1E-09 70.3 8.2 59 63-125 251-320 (348)
203 1k32_A Tricorn protease; prote 97.6 0.00016 5.5E-09 73.3 8.9 72 44-125 734-814 (1045)
204 1ky9_A Protease DO, DEGP, HTRA 97.6 9.9E-06 3.4E-10 76.1 0.0 68 49-125 372-439 (448)
205 3num_A Serine protease HTRA1; 97.4 2.1E-05 7.2E-10 70.7 0.0 57 62-125 253-309 (332)
206 1ky9_A Protease DO, DEGP, HTRA 97.4 0.00011 3.7E-09 69.0 4.1 59 63-125 286-344 (448)
207 4fln_A Protease DO-like 2, chl 96.9 0.0021 7.3E-08 61.7 7.7 61 62-125 276-344 (539)
208 4fln_A Protease DO-like 2, chl 96.3 0.011 3.6E-07 56.8 8.2 57 61-122 413-469 (539)
209 2op5_A Hypothetical protein; f 70.4 2.7 9.4E-05 30.4 2.6 27 210-236 38-64 (117)
210 2rp4_A Transcription factor P5 61.3 4.1 0.00014 28.4 1.9 28 192-219 31-69 (76)
211 3dor_A Protein CT_858, CPAF; m 56.4 14 0.00047 35.6 5.3 42 48-98 85-126 (583)
212 2heo_A Z-DNA binding protein 1 44.2 19 0.00064 23.9 3.1 28 205-239 39-66 (67)
213 2e8o_A SAM domain and HD domai 40.0 43 0.0015 24.2 4.8 27 188-220 32-58 (103)
214 2m0o_A PHD finger protein 1; t 39.4 11 0.00036 26.6 1.2 20 223-242 45-65 (79)
215 2k13_X Saratin; collagen bindi 34.7 11 0.00039 26.6 0.8 12 231-242 38-49 (103)
216 2gjh_A Designed protein; oblig 33.9 22 0.00077 22.9 2.0 15 203-217 11-25 (62)
217 1kn6_A Prohormone convertase 1 31.6 34 0.0012 24.6 2.9 39 192-239 13-51 (90)
218 1n13_B PVLARGDC, pyruvoyl-depe 30.7 20 0.00068 27.0 1.6 26 194-220 54-79 (113)
219 2lnb_A Z-DNA-binding protein 1 29.2 48 0.0016 23.4 3.2 32 203-241 46-77 (80)
220 1ffk_F Ribosomal protein L10E; 26.2 39 0.0013 26.9 2.6 46 73-123 106-152 (157)
221 2e5p_A Protein PHF1, PHD finge 26.0 29 0.00099 23.7 1.5 23 220-242 25-48 (68)
222 2e5q_A PHD finger protein 19; 24.6 34 0.0012 23.0 1.7 22 221-242 24-46 (63)
223 3bbo_O Ribosomal protein L16; 24.0 48 0.0016 25.6 2.7 34 73-111 88-121 (135)
224 1x60_A Sporulation-specific N- 23.1 39 0.0013 22.7 1.8 23 198-220 49-71 (79)
225 1t6l_A DNA polymerase processi 22.5 23 0.0008 30.2 0.7 16 223-238 56-71 (290)
226 3agt_A Hemerythrin-like domain 21.6 40 0.0014 25.4 1.8 27 189-220 109-135 (136)
227 2klq_A CBD, P105MCM, DNA repli 21.2 58 0.002 24.3 2.6 34 188-221 38-80 (114)
228 1uku_A CUTA1, periplasmic diva 20.8 50 0.0017 24.2 2.1 26 202-228 8-33 (102)
229 3r8s_M 50S ribosomal protein L 20.6 58 0.002 25.2 2.5 32 78-114 92-123 (136)
230 3m3h_A OPRT, oprtase, orotate 20.6 1E+02 0.0034 25.8 4.3 33 79-111 131-163 (234)
231 1nza_A CUTA, divalent cation t 20.5 51 0.0017 24.2 2.1 21 202-222 9-29 (103)
232 3ahp_A CUTA1; thermostable pro 20.1 52 0.0018 24.4 2.1 25 202-227 13-37 (108)
233 1vhf_A Periplasmic divalent ca 20.1 52 0.0018 24.6 2.1 25 202-227 10-34 (113)
No 1
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31
Probab=99.81 E-value=7.2e-21 Score=146.51 Aligned_cols=53 Identities=81% Similarity=1.380 Sum_probs=52.2
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeecccccccccceeeeecc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHTVNKITFSEQCYYIFGD 240 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~~k~~f~e~cyy~~~~ 240 (245)
|+|+||||.+|++|+.+|.||.+||..||++|||+|++||.+|.++|||+|||
T Consensus 53 G~dlVdWL~~~~~~~~~r~eAv~lg~~Ll~~G~I~hv~~~~~F~D~~~y~f~~ 105 (105)
T 1fsh_A 53 GADVVDWLYTHVEGFKERREARKYASSMLKHGFLRHTVNKITFSEQCYYVFGD 105 (105)
T ss_dssp HHHHHHHHHHHCCCCSSHHHHHHHHHHHHHTTTEECSSSSCCCCSSSCCEECC
T ss_pred cHHHHHHHHHhCcCCCCHHHHHHHHHHHHHCCcEEEcCCCCcccCCCeeecCC
Confidence 69999999999999999999999999999999999999999999999999998
No 2
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.75 E-value=8.9e-18 Score=128.93 Aligned_cols=100 Identities=75% Similarity=1.135 Sum_probs=85.2
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
+.++++|.|.+++..+|||+|.++.+.....+++|.+|.+||||+++|+|++||+|++|||+++.++++++++.+|+.+.
T Consensus 3 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 3 HMNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp -CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 35889999998777899999999865334689999999999999999999999999999999999999999999999874
Q ss_pred CCCCcEEEEEEecCCCCCCC
Q psy1022 113 QKPGPIKLVVAKCWDPNPKG 132 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~~~~~~ 132 (245)
++++.|+|+|.|..++.+..
T Consensus 83 ~~~~~v~l~v~R~~~~~~~~ 102 (108)
T 3cbz_A 83 HKPGPIVLTVAKSGGGSGNE 102 (108)
T ss_dssp TSSSCEEEEEECCCC-CCCC
T ss_pred cCCCeEEEEEEeCCCCCcce
Confidence 32457999999977665543
No 3
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.73 E-value=6.3e-17 Score=122.17 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=75.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
-+.++|.|.|.. ++|||+|.++ +.+.+||++|.+||+|+++|+|++||+|++|||+++.+++|++++++|+++..
T Consensus 4 g~~k~V~l~K~~-~~LG~tI~~~----g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 4 GIEKEVNVYKSE-DSLGLTITDN----GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEEECCS-SCCCEEEECS----SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CeEEEEEEEECC-CCceEEEEcC----CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 467899999876 8999999974 25779999999999999999999999999999999999999999999999732
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..++|++.+
T Consensus 79 -g~~~~L~lv~ 88 (95)
T 3gge_A 79 -EELFTMKLIE 88 (95)
T ss_dssp -TCEEEEEEEE
T ss_pred -CCEEEEEEEC
Confidence 4578888886
No 4
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.70 E-value=1e-16 Score=117.95 Aligned_cols=78 Identities=17% Similarity=0.286 Sum_probs=71.1
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|+|.|++.++|||++.++ +|.+|.+||||+++| |++||+|++|||+++.+++|++++++||++
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g---------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~--- 70 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG---------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS--- 70 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT---------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---
T ss_pred ceEEEEEEECCCCCeEEEEECC---------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC---
Confidence 4578999999888899999863 489999999999999 899999999999999999999999999977
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
++.|+|+|.+.
T Consensus 71 g~~V~L~v~p~ 81 (82)
T 1r6j_A 71 GTVVTITIMPA 81 (82)
T ss_dssp CSEEEEEEEEC
T ss_pred CCEEEEEEEeC
Confidence 88999999863
No 5
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.68 E-value=5.4e-16 Score=119.28 Aligned_cols=91 Identities=22% Similarity=0.453 Sum_probs=76.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.++|.|.++ .+|||+|.|+.+.....++||.+|.+||+|+++|+|++||+|++|||+++.+++|++++++|+.+.
T Consensus 13 ~~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 13 DPAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CTTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 346788888764 789999999865333458999999999999999999999999999999999999999999999983
Q ss_pred CC-CCcEEEEEEec
Q psy1022 113 QK-PGPIKLVVAKC 125 (245)
Q Consensus 113 ~~-~~~V~L~V~r~ 125 (245)
.+ +..++|.+.|.
T Consensus 91 ~r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 91 LRSESPWEIAFIRS 104 (109)
T ss_dssp CSSSSCEEEEEECC
T ss_pred cCCCceEEEEEEeC
Confidence 11 35688888874
No 6
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.67 E-value=7.6e-16 Score=120.33 Aligned_cols=89 Identities=30% Similarity=0.513 Sum_probs=79.8
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
...++|.|.+++..+|||+|.++.+. ....+++|.+|.+||+|+++|+|++||+|++|||+++.++++++++.+|+.+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~- 101 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT- 101 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-
T ss_pred CCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 46778889888789999999998642 2467899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
++.|+|+|.|.
T Consensus 102 --~~~v~L~v~R~ 112 (118)
T 3b76_A 102 --SSSIVLKALEV 112 (118)
T ss_dssp --CSEEEEEEEEE
T ss_pred --CCeEEEEEEEC
Confidence 78899999873
No 7
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-15 Score=116.78 Aligned_cols=92 Identities=29% Similarity=0.410 Sum_probs=79.7
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
..+.++++|.|.|.. .+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|
T Consensus 11 ~~~~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (108)
T 2d92_A 11 LWSPEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEIL 89 (108)
T ss_dssp SSCSSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred ccCCceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 344578999999886 7999999997642 2367899999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEec
Q psy1022 109 REVVQKPGPIKLVVAKC 125 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r~ 125 (245)
+... ++.|+|+|.|.
T Consensus 90 ~~~~--~~~v~l~v~R~ 104 (108)
T 2d92_A 90 KAVP--PGLVHLGICSG 104 (108)
T ss_dssp HHSC--SEEEEEEEECC
T ss_pred HhCC--CCeEEEEEEcC
Confidence 9862 45799999874
No 8
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1.9e-15 Score=117.40 Aligned_cols=91 Identities=23% Similarity=0.322 Sum_probs=79.9
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
...++.|.|.++...+|||.|.++.+. ...+++|..|.+||+|+++|+|++||+|++|||+.+.++++++++++|+..
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~~~~~~-~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~- 90 (117)
T 1v62_A 13 ASGPLMVEIVKTPGSALGISLTTTSLR-NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI- 90 (117)
T ss_dssp SSSSEEEEEECCTTCCCCCEEEEECCS-SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC-
T ss_pred CCCcEEEEEEcCCCCcccEEEEccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 457889999998878999999987541 234599999999999999999999999999999999999999999999976
Q ss_pred CCCCcEEEEEEecCC
Q psy1022 113 QKPGPIKLVVAKCWD 127 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~ 127 (245)
+..|.|+|.|...
T Consensus 91 --g~~v~l~v~r~~~ 103 (117)
T 1v62_A 91 --SEKVRLEILPVPQ 103 (117)
T ss_dssp --SSEEEEEECCBTT
T ss_pred --CCeEEEEEEECCC
Confidence 7899999998533
No 9
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.65 E-value=3.2e-15 Score=111.39 Aligned_cols=87 Identities=24% Similarity=0.507 Sum_probs=78.9
Q ss_pred ceeeEEEEEEcC-CCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMD-TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~-~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
+.++++|.|.+. ++.+|||++.++.+ ..+++|..|.+||||+++|+|++||+|++|||.++.++++.+++..++..
T Consensus 1 e~~~~~v~l~k~~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 1 SMEILQVALHKRDSGEQLGIKLVRRTD---EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS 77 (95)
T ss_dssp CEEEEEEEEECSSTTCCCCEEEEECSS---SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CcEEEEEEEEECCCCCcccEEEEeccC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 368899999975 56789999998764 67999999999999999999999999999999999999999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 78 ---g~~v~l~v~R~ 88 (95)
T 2vwr_A 78 ---GERVNLTIARP 88 (95)
T ss_dssp ---CSEEEEEEEEE
T ss_pred ---CCEEEEEEEcC
Confidence 78899999984
No 10
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.65 E-value=6.7e-15 Score=115.78 Aligned_cols=100 Identities=31% Similarity=0.440 Sum_probs=85.6
Q ss_pred CCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCH
Q psy1022 25 SSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSN 101 (245)
Q Consensus 25 ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~ 101 (245)
++.......++.++|.|.++...+|||++.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.++++
T Consensus 5 ~~~~~~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 84 (129)
T 2dmz_A 5 SSGGSDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFAN 84 (129)
T ss_dssp CCCCCSSCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCH
T ss_pred cCCCCCCCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 33444455789999999877778999999997642 135789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEEEecCC
Q psy1022 102 DEAVRVLREVVQKPGPIKLVVAKCWD 127 (245)
Q Consensus 102 ~eav~~Lr~~~~~~~~V~L~V~r~~~ 127 (245)
++++.+|+.. +..|.|+|.|...
T Consensus 85 ~~~~~~l~~~---~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 85 HDVVEVLRNA---GQVVHLTLVRRKT 107 (129)
T ss_dssp HHHHHHHHHC---CSSEEEEEEEESS
T ss_pred HHHHHHHHcC---CCeEEEEEEeCCc
Confidence 9999999985 7889999998543
No 11
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.64 E-value=2.2e-15 Score=119.19 Aligned_cols=92 Identities=27% Similarity=0.472 Sum_probs=78.8
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
....++++|.|.++. .+|||+|.++.+. .+..++||..|.+||+|+++|.|++||+|++|||+++.+++|++++++|+
T Consensus 25 ~~~~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 103 (130)
T 1i16_A 25 TAEATVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIK 103 (130)
T ss_dssp SSSEEEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHH
T ss_pred CCCCcEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345689999998874 7899999997652 13568999999999999999669999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy1022 110 EVVQKPGPIKLVVAKC 125 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (245)
... ...|.|+|.|.
T Consensus 104 ~~~--~~~v~l~v~r~ 117 (130)
T 1i16_A 104 ALP--DGPVTIVIRRK 117 (130)
T ss_dssp TSC--SSEEEEEEEEE
T ss_pred hCC--CceEEEEEEeC
Confidence 872 34599999874
No 12
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=2.2e-15 Score=116.60 Aligned_cols=95 Identities=24% Similarity=0.350 Sum_probs=82.1
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCC-------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSND 102 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~ 102 (245)
...-.+.++|.|.++...+|||+|.++.+. ....+++|..|.++|+|+++|+|++||+|++|||+++.++++.
T Consensus 10 ~~~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 89 (117)
T 2ehr_A 10 FSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHS 89 (117)
T ss_dssp SSCBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHH
T ss_pred cccCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 334458899999988878999999997642 1246999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEEEecCC
Q psy1022 103 EAVRVLREVVQKPGPIKLVVAKCWD 127 (245)
Q Consensus 103 eav~~Lr~~~~~~~~V~L~V~r~~~ 127 (245)
+++.+|+.. +..+.|+|.+..+
T Consensus 90 ~~~~~~~~~---g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 90 EAVEAIKNA---GNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHHHHTS---CSSEEEEECCBSC
T ss_pred HHHHHHHcC---CCeEEEEEEECCC
Confidence 999999987 7889999987433
No 13
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.64 E-value=2.3e-15 Score=111.41 Aligned_cols=86 Identities=35% Similarity=0.577 Sum_probs=78.2
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.++|.|.+.+..+|||++.++.+ ..+++|..|.+||||+++|+|++||+|++|||+++.+++++++..+++..
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 77 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRN---DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS-- 77 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSS---SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred ceEEEEEEEeCCCCcccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 4788999998888899999998754 67999999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 78 -~~~v~l~v~R~ 88 (92)
T 2qg1_A 78 -LGTVTLEVGRI 88 (92)
T ss_dssp -CSEEEEEEECC
T ss_pred -CCeEEEEEEcc
Confidence 77899999873
No 14
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=3e-15 Score=113.74 Aligned_cols=96 Identities=30% Similarity=0.451 Sum_probs=82.4
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCC----CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav 105 (245)
++.+.+.++|.|.++. .+|||+|.++.+. ..+.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 2 s~~~~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 80 (105)
T 1wha_A 2 SSGSSGRHVACLARSE-RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAV 80 (105)
T ss_dssp CCCCCEEEEEEECCCT-TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCCeeEEEEEEeCC-CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3446788999998765 6799999997642 2357999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEecCCCC
Q psy1022 106 RVLREVVQKPGPIKLVVAKCWDPN 129 (245)
Q Consensus 106 ~~Lr~~~~~~~~V~L~V~r~~~~~ 129 (245)
.+|+.. +..+.|+|.|..+..
T Consensus 81 ~~l~~~---g~~v~l~v~R~~~~~ 101 (105)
T 1wha_A 81 SLLTAA---SPTIALLLEREAGSG 101 (105)
T ss_dssp HHHTSC---CSCEEEEEEECCCCC
T ss_pred HHHHcC---CCeEEEEEEECCCCC
Confidence 999987 778999999865443
No 15
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.63 E-value=8.5e-16 Score=120.19 Aligned_cols=91 Identities=27% Similarity=0.430 Sum_probs=74.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
..++++|.|.+....+|||+|.++.+. ....+++|..|.+||||+++|.|++||+|++|||+++.++++.+++.+|+..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 101 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA 101 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 457889999998878999999997642 1245899999999999999966999999999999999999999999999998
Q ss_pred cCCCCcEEEEEEecC
Q psy1022 112 VQKPGPIKLVVAKCW 126 (245)
Q Consensus 112 ~~~~~~V~L~V~r~~ 126 (245)
++.|+|+|.|..
T Consensus 102 ---~~~v~l~v~r~g 113 (120)
T 2iwo_A 102 ---SGSIEMQVVAGG 113 (120)
T ss_dssp ---CSEEEEEEECCT
T ss_pred ---CCeEEEEEEECC
Confidence 778999999743
No 16
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=2.1e-15 Score=111.50 Aligned_cols=82 Identities=26% Similarity=0.402 Sum_probs=73.9
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
++.|.|.|+++.+|||+|.++. .++++|.+|.+||||++++.|++||+|++|||+++.++++++++++|+.. .
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~----~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~ 74 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE----LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM---R 74 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC----GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC---C
T ss_pred eEEEEEEeCCCCceeEEEEeCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---C
Confidence 5789999998899999999842 46899999999999999666999999999999999999999999999997 5
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
+.++|+|.+
T Consensus 75 ~~v~l~v~r 83 (88)
T 1kwa_A 75 GSITFKIVP 83 (88)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEC
Confidence 589999986
No 17
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.63 E-value=3.6e-15 Score=113.33 Aligned_cols=88 Identities=36% Similarity=0.578 Sum_probs=78.2
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
.++++|.|.+++ .+|||+|.++.+. ..+.+++|..|.+||||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 2 e~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 2 EKIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp -CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred CeEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 468899999887 7899999997652 234699999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..+.|+|.|.
T Consensus 81 ~---~~~v~l~v~R~ 92 (105)
T 2awx_A 81 T---SDFVYLKVAKP 92 (105)
T ss_dssp C---CSEEEEEEECC
T ss_pred C---CCeEEEEEEcC
Confidence 7 78899999974
No 18
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.63 E-value=4e-15 Score=110.42 Aligned_cols=88 Identities=39% Similarity=0.619 Sum_probs=77.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
++++++|.|.++. .+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 1 s~~~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 1 SMTIMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CCCEEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CcEEEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3578999998875 7899999997653 23469999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEe
Q psy1022 110 EVVQKPGPIKLVVAK 124 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r 124 (245)
.. +..+.|+|.|
T Consensus 80 ~~---~~~v~l~v~R 91 (94)
T 2fe5_A 80 NT---SDMVYLKVAK 91 (94)
T ss_dssp TC---CSEEEEEEEC
T ss_pred cC---CCeEEEEEEc
Confidence 87 6789999986
No 19
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.63 E-value=2e-15 Score=114.66 Aligned_cols=89 Identities=30% Similarity=0.345 Sum_probs=77.9
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
..+++|.|.+....+|||+|.++.+ ...+++|..|.+||||+++|.|++||+|++|||.++.++++++++.+|+..
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~--~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-- 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-- 83 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC--
T ss_pred CCcEEEEEEeCCCCccCEEEEeccC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 3567899988888899999999865 245899999999999999744999999999999999999999999999998
Q ss_pred CCCcEEEEEEecCC
Q psy1022 114 KPGPIKLVVAKCWD 127 (245)
Q Consensus 114 ~~~~V~L~V~r~~~ 127 (245)
++.++|+|.+.+.
T Consensus 84 -~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 84 -RGEIEFEVVYVAL 96 (103)
T ss_dssp -CSEEEEEEEECC-
T ss_pred -CCcEEEEEEecCC
Confidence 7899999998544
No 20
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.63 E-value=9e-15 Score=110.30 Aligned_cols=91 Identities=31% Similarity=0.519 Sum_probs=80.5
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
.+++++|.|.++ ..+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||.++.++++.+++.+++
T Consensus 2 ~~~~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 80 (102)
T 2i1n_A 2 MFKYEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALK 80 (102)
T ss_dssp CEEEEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CceEEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 478899999887 48899999997652 13579999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEecCC
Q psy1022 110 EVVQKPGPIKLVVAKCWD 127 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~~~ 127 (245)
.. +..+.|+|.|...
T Consensus 81 ~~---g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 81 EA---GPVVRLVVRRRQP 95 (102)
T ss_dssp HS---CSEEEEEEEEECC
T ss_pred cC---CCeEEEEEEeCCC
Confidence 87 7899999998543
No 21
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.63 E-value=7.8e-15 Score=111.37 Aligned_cols=94 Identities=26% Similarity=0.406 Sum_probs=81.5
Q ss_pred CCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHH
Q psy1022 25 SSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEA 104 (245)
Q Consensus 25 ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~ea 104 (245)
|+..+.......++|.|.+.+..+|||.+.++.+ ...+++|..|.+++||+++| |++||+|++|||+.+.+++++++
T Consensus 5 S~~~~~~~~~~~~~v~l~k~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~ 81 (104)
T 1wi2_A 5 SSGNNELTQFLPRIVTLKKPPGAQLGFNIRGGKA--SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKA 81 (104)
T ss_dssp CCSCCCCCSSCCEEEEECCCTTCCCSEEEECCSS--SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHH
T ss_pred cccccCcCCCCCEEEEEEeCCCCCccEEEEcccC--CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 4444445566789999998887899999999764 35789999999999999999 99999999999999999999999
Q ss_pred HHHHHhccCCCCcEEEEEEec
Q psy1022 105 VRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 105 v~~Lr~~~~~~~~V~L~V~r~ 125 (245)
+.+|+. +..+.|+|.+.
T Consensus 82 ~~~l~~----~~~v~l~v~r~ 98 (104)
T 1wi2_A 82 VEILKT----AREISMRVRFF 98 (104)
T ss_dssp HHHHHH----SSSEEEEEECC
T ss_pred HHHHhC----CCEEEEEEEEC
Confidence 999997 46799999873
No 22
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.62 E-value=3.9e-15 Score=110.60 Aligned_cols=84 Identities=29% Similarity=0.460 Sum_probs=75.7
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
.+++|.|.++. .+|||++.++. ...+++|.+|.+||||+++|+|++||+|++|||.++.++++++++.+|+..
T Consensus 4 ~~r~v~l~k~~-~~lG~~i~~~~---~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 76 (93)
T 3o46_A 4 SVKIIRLVKNR-EPLGATIKKDE---QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS--- 76 (93)
T ss_dssp CCEEEEEEESS-SCCCEEEEECT---TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC---
T ss_pred cEEEEEEEeCC-CCccEEEEecC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 56788898875 69999999863 268999999999999999999999999999999999999999999999997
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
++.++|+|.+.
T Consensus 77 ~~~v~l~v~~~ 87 (93)
T 3o46_A 77 QGAITFKIIPG 87 (93)
T ss_dssp CEEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 67899999874
No 23
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=5.6e-15 Score=114.92 Aligned_cols=88 Identities=35% Similarity=0.601 Sum_probs=78.5
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
.+.++|.|.++. .+|||+|.++.+. ..+.+++|..|.+||+|+++|+|++||+|++|||+++.++++++++.+|+.
T Consensus 23 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 23 MTVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 478889998876 8999999997642 235689999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..|+|+|.|.
T Consensus 102 ~---g~~v~l~v~R~ 113 (117)
T 2byg_A 102 T---SEVVYLKVGKP 113 (117)
T ss_dssp C---CSEEEEEEEEE
T ss_pred C---CCeEEEEEEeC
Confidence 7 78899999873
No 24
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=7.2e-15 Score=111.99 Aligned_cols=92 Identities=33% Similarity=0.556 Sum_probs=79.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEc---ccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
.+++++|.|.++. .+|||+|.+ +.+. ....++||..|.+||||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 7 ~~~~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 7 GLELFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp CEEEEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred CceEEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5788999998775 789999998 3321 1357999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEecCCC
Q psy1022 109 REVVQKPGPIKLVVAKCWDP 128 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r~~~~ 128 (245)
+.. +..|.|+|.|....
T Consensus 86 ~~~---~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 86 RNT---KGNVRFVIGREKPS 102 (107)
T ss_dssp HHC---CSEEEEEEEEECCC
T ss_pred hcC---CCeEEEEEEeCCCC
Confidence 987 78999999985443
No 25
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=1.2e-14 Score=111.41 Aligned_cols=96 Identities=32% Similarity=0.485 Sum_probs=82.8
Q ss_pred CCCCCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCH
Q psy1022 22 SSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSN 101 (245)
Q Consensus 22 ss~ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~ 101 (245)
|+.++.++...-.+.+.|.|.++. .+|||.|.++. +.+++|..|.+||+|+++|+|++||+|++|||+.+.++++
T Consensus 2 ss~ss~~~~~~~~~~~~v~l~~~~-~~lG~~l~~~~----~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (111)
T 2dlu_A 2 SSGSSGPETVCWGHVEEVELINDG-SGLGFGIVGGK----TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTS 76 (111)
T ss_dssp CSSCCCCCCCSCSEEEEEEEECCS-SCCCEEEECCS----SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCH
T ss_pred cccccCCCCcCcCceEEEEEEeCC-CccCEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 445566655555678889998764 78999999854 4689999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEEEec
Q psy1022 102 DEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 102 ~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++++.+|+.. +..|.|+|.|.
T Consensus 77 ~~~~~~l~~~---g~~v~l~v~R~ 97 (111)
T 2dlu_A 77 EQVAQVLRNC---GNSVRMLVARD 97 (111)
T ss_dssp HHHHHHHHHH---CSEEEEEEEES
T ss_pred HHHHHHHHhC---CCeEEEEEEeC
Confidence 9999999987 78899999883
No 26
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.62 E-value=4.7e-15 Score=116.63 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=79.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecc-cCCHHHHHHHHHh
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLRE 110 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~-~~t~~eav~~Lr~ 110 (245)
..++++|.|.+....+|||+|.++.+. ....++||..|.+||||+++|+|++||+|++|||+++. ++++++++.+|+.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 347889999988778999999987652 22358999999999999999999999999999999997 9999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..|.|+|.|.
T Consensus 103 ~---~~~v~l~v~r~ 114 (128)
T 2db5_A 103 T---TGSLRLIVARE 114 (128)
T ss_dssp C---CSEEEEEEEEC
T ss_pred C---CCeEEEEEEcC
Confidence 7 78899999984
No 27
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=3.2e-14 Score=111.30 Aligned_cols=92 Identities=24% Similarity=0.426 Sum_probs=79.7
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
+....+.++|.|.++ ..+|||+|.++.+ ...+++|..|.++|+|+++|+|++||+|++|||+.+.++++++++++|+
T Consensus 14 ~~~~~~~~~v~l~~~-~~glG~~~~~g~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 14 SQLKGTFLSTTLKKS-NMGFGFTIIGGDE--PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp TTCCSEEEEEEEECC-TTSCSEEEECCSS--SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred ccCCCcEEEEEEEeC-CCceeEEEecccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 344568889999876 4789999998764 3678999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy1022 110 EVVQKPGPIKLVVAKC 125 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (245)
.... +..|.|+|.|.
T Consensus 91 ~~~~-g~~v~l~v~R~ 105 (123)
T 1ueq_A 91 SVPI-GQSVNLVLCRG 105 (123)
T ss_dssp TSCT-TCEEEEEEEES
T ss_pred hCCC-CCeEEEEEEeC
Confidence 8511 57899999984
No 28
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=1.2e-15 Score=117.03 Aligned_cols=94 Identities=28% Similarity=0.479 Sum_probs=81.8
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVR 106 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~ 106 (245)
..+++|.|.++.+.+|||+|.++.+. ....+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.
T Consensus 8 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 8 PGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp CSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred CccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35677889888888999999997631 23568999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEEEecCCCCC
Q psy1022 107 VLREVVQKPGPIKLVVAKCWDPNP 130 (245)
Q Consensus 107 ~Lr~~~~~~~~V~L~V~r~~~~~~ 130 (245)
+|+.. +..+.|+|.|..++.+
T Consensus 88 ~l~~~---g~~v~l~v~r~~~~~~ 108 (111)
T 1uju_A 88 LLRSV---GDTLTVLVCDGFESGP 108 (111)
T ss_dssp HHSSC---SSEEEECCCCCCCCSC
T ss_pred HHHcC---CCeEEEEEEECCCCCC
Confidence 99886 7889999998666544
No 29
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=1.1e-14 Score=110.87 Aligned_cols=90 Identities=28% Similarity=0.468 Sum_probs=78.9
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCC------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHH
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav 105 (245)
.+.+.++|.|.++ ..+|||+|.++.+. ....+++|..|.++|||+++|.|++||+|++|||+++.++++.+++
T Consensus 5 ~~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 5 SSGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp CSSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred cCcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3568899999887 58899999987631 1357999999999999999955999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEec
Q psy1022 106 RVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 106 ~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.+|+.. +..+.|+|.|.
T Consensus 84 ~~~~~~---~~~v~l~v~R~ 100 (107)
T 1uhp_A 84 EAFKTA---KEPIVVQVLRR 100 (107)
T ss_dssp HHHHHC---CSSEEEEEEEC
T ss_pred HHHHcC---CCcEEEEEEeC
Confidence 999987 78899999884
No 30
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.61 E-value=6.5e-15 Score=112.80 Aligned_cols=84 Identities=19% Similarity=0.351 Sum_probs=76.5
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
+++++|.|.++...+|||++.+. ..+++|..|.+||||+++|+|++||.|++|||+++.++++.+++.+++..
T Consensus 1 ~~~~~v~L~k~~~~glG~~i~~~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-- 73 (106)
T 2la8_A 1 LEKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-- 73 (106)
T ss_dssp CEEEEEEECCBSSSTTCCEEEEC-----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSC--
T ss_pred CeEEEEEEEeCCCCccCEEEEeC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC--
Confidence 36789999988889999999872 57899999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
++.|.|+|.|.
T Consensus 74 -~~~v~l~v~R~ 84 (106)
T 2la8_A 74 -NGKVSMEVTRP 84 (106)
T ss_dssp -BSCEEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 67899999984
No 31
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.61 E-value=4.4e-15 Score=108.80 Aligned_cols=85 Identities=32% Similarity=0.408 Sum_probs=74.9
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
++++|.|.++...+|||++.++.+ ...+++|.+|.+||||++++.|++||+|++|||.++.++++++++.+++..
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 76 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ--- 76 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC---
T ss_pred CEEEEEEEECCCCcccEEEEccCC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 467899999888899999999764 246799999999999999534999999999999999999999999999987
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
++.+.|+|..
T Consensus 77 ~~~v~l~v~~ 86 (87)
T 4e34_A 77 RGEIEFEVVY 86 (87)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 7789998864
No 32
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.61 E-value=5.8e-15 Score=108.91 Aligned_cols=86 Identities=31% Similarity=0.361 Sum_probs=77.0
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.++|.|.+....+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~--~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 78 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-- 78 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CccEEEEEEeCCCCCcCEEEEcccC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 3568899999878899999998764 257899999999999999955999999999999999999999999999987
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..++|+|.+
T Consensus 79 -~~~v~l~v~r 88 (90)
T 1qav_A 79 -GKEVVLEVKY 88 (90)
T ss_dssp -CSEEEEEEEE
T ss_pred -CCeEEEEEEE
Confidence 7789999986
No 33
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=5.8e-15 Score=111.87 Aligned_cols=94 Identities=20% Similarity=0.368 Sum_probs=80.9
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
..++.++|.|.++ ..+|||+|.++.+ ...+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|+..
T Consensus 6 ~~~~~~~v~l~~~-~~g~G~~i~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 6 SGYKELDVHLRRM-ESGFGFRILGGDE--PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp SSEEEECCEEESS-SSSCCEEECCCCS--TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred CCceEEEEEEEeC-CCccCEEEeeecC--CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3678999999885 5789999998764 357899999999999999999999999999999999999999999999886
Q ss_pred cCCCCcEEEEEEecCCCC
Q psy1022 112 VQKPGPIKLVVAKCWDPN 129 (245)
Q Consensus 112 ~~~~~~V~L~V~r~~~~~ 129 (245)
.. +..|+|+|.|.....
T Consensus 83 ~~-g~~v~l~v~R~~~~~ 99 (103)
T 1uep_A 83 AR-NGQVNLTVRRKVLSG 99 (103)
T ss_dssp HH-HTEEEEEEEEECCCC
T ss_pred CC-CCcEEEEEEeCCCCC
Confidence 11 368999999865443
No 34
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.60 E-value=9.3e-15 Score=113.42 Aligned_cols=92 Identities=20% Similarity=0.319 Sum_probs=77.7
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
....+++.|.|.++...+|||+|.++.+. ...+++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+|+.
T Consensus 11 ~~~~~~~~v~l~~~~~~~lG~~i~g~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 89 (119)
T 1x6d_A 11 KQLDGIHVTILHKEEGAGLGFSLAGGADL-ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQ 89 (119)
T ss_dssp SSCTTEEEEEEECCTTSCCSEEEECCSSS-SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHH
T ss_pred CCCCCeEEEEEEeCCCCccCEEEeCCCCC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 33457888889888889999999997651 35789999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
.. ...+.|++.|.
T Consensus 90 ~~--~~~~~l~v~R~ 102 (119)
T 1x6d_A 90 AR--EPRQAVIVTRK 102 (119)
T ss_dssp TT--SSSEEEEEEEC
T ss_pred CC--CCeEEEEEEcC
Confidence 72 33455777763
No 35
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.60 E-value=3.9e-15 Score=113.27 Aligned_cols=90 Identities=18% Similarity=0.346 Sum_probs=77.3
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcC-CCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G-~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
...++.|.|.++...+|||.+.++.+ ...+++|..|.+||+|+++| +|++||+|++|||+++.++++.+++.+|+..
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~--~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCC--CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 45789999998887899999999765 24689999999999999999 6999999999999999999999999999987
Q ss_pred cC-CCCcEEEEEEe
Q psy1022 112 VQ-KPGPIKLVVAK 124 (245)
Q Consensus 112 ~~-~~~~V~L~V~r 124 (245)
.. .+..|.|+|.|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 21 01389999875
No 36
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.60 E-value=2.1e-14 Score=108.14 Aligned_cols=90 Identities=34% Similarity=0.548 Sum_probs=79.2
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCC---CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
....++|.|.++. .+|||+|.++.+.. ...+++|..|.+||+|+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 5 ~~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 5 LVTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp GEEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CCccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3578889999876 88999999976531 2479999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEecC
Q psy1022 110 EVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~~ 126 (245)
.. +..+.|+|.|..
T Consensus 84 ~~---g~~v~l~v~R~~ 97 (101)
T 2jik_A 84 NA---GYAVSLRVQHRL 97 (101)
T ss_dssp TC---CSEEEEEEEEES
T ss_pred hC---CCeEEEEEEeCC
Confidence 86 678999998843
No 37
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=99.60 E-value=2.4e-16 Score=146.15 Aligned_cols=56 Identities=77% Similarity=1.255 Sum_probs=55.0
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeecccccccccceeeeeccccc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHTVNKITFSEQCYYIFGDLLQ 243 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~~k~~f~e~cyy~~~~~~~ 243 (245)
|+|+||||.+|++|+.+|.||..||..||++|||+|++||.+|.++|||+|||+|+
T Consensus 41 G~elVdWL~~~~~~~~~R~eA~~~g~~Ll~~G~i~hv~~~~~F~d~~~y~f~~~~~ 96 (385)
T 3ml6_A 41 GSDVVDWLYHHVEGFPERREARKYASGLLKAGLIRHTVNKITFSEQCYYVFGDLSG 96 (385)
T ss_dssp HHHHHHHHHHTCCSCSSHHHHHHHHHHHHHHSSEEESSSCSSCCSSSEEEECCCCC
T ss_pred hHHHHHHHHHccCCCCCHHHHHHHHHHHHhCCcEEEcCCcceecCcceEEeecccc
Confidence 69999999999999999999999999999999999999999999999999999997
No 38
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.60 E-value=1.5e-14 Score=107.80 Aligned_cols=88 Identities=38% Similarity=0.596 Sum_probs=77.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
-++++|.|.++. .+|||++.++.+. ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~- 81 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT- 81 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC-
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 367899998775 8899999997643 2346999999999999999999999999999999999999999999999986
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 82 --g~~v~l~v~R~ 92 (96)
T 1d5g_A 82 --GQVVHLLLEKG 92 (96)
T ss_dssp --CSEEEEEEECC
T ss_pred --CCeEEEEEEcC
Confidence 78899999873
No 39
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=108.32 Aligned_cols=90 Identities=26% Similarity=0.439 Sum_probs=78.2
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
+++.++|.|.++ ..+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|+.
T Consensus 1 s~~~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 1 SMRTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp CEEEEEEEEECB-TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CceEEEEEEEeC-CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 357788999876 48899999997542 125699999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEecC
Q psy1022 111 VVQKPGPIKLVVAKCW 126 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~~ 126 (245)
. +..+.|+|.|..
T Consensus 80 ~---g~~v~l~v~R~~ 92 (97)
T 2jil_A 80 C---GQEAALLIEYDV 92 (97)
T ss_dssp S---CSEEEEEEEEEC
T ss_pred C---CCeEEEEEEeCC
Confidence 5 789999999843
No 40
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.60 E-value=7.2e-15 Score=121.88 Aligned_cols=88 Identities=31% Similarity=0.579 Sum_probs=77.9
Q ss_pred ceeeEEEEEEcCCCCcccEEEEc---ccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
..++++|.|.++. .+|||+|.+ +... ....++||..|.+||||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 78 ~~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 78 RLELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp TSEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred CceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4578899998876 789999999 3321 2357899999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEe
Q psy1022 109 REVVQKPGPIKLVVAK 124 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r 124 (245)
+.+ ++.|+|+|.|
T Consensus 157 ~~~---g~~v~L~V~R 169 (170)
T 3egg_C 157 RNT---KGRVRFMIGR 169 (170)
T ss_dssp HHC---CSEEEEEEEE
T ss_pred HcC---CCEEEEEEEe
Confidence 997 7899999987
No 41
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.60 E-value=7.1e-15 Score=115.93 Aligned_cols=94 Identities=33% Similarity=0.491 Sum_probs=77.8
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
...++|.|.+....+|||+|.++.+. ....++||..|.+||||+++|+|++||+|++|||+++.+++|++++.+|+.+
T Consensus 24 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 24 QLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 34666777656779999999987641 1135899999999999999999999999999999999999999999999975
Q ss_pred c----CCCCcEEEEEEecCC
Q psy1022 112 V----QKPGPIKLVVAKCWD 127 (245)
Q Consensus 112 ~----~~~~~V~L~V~r~~~ 127 (245)
. ..+..|+|+|.|...
T Consensus 104 ~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 104 MSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHTCEEEEEEEECSC
T ss_pred hccccCCCCEEEEEEEeCCC
Confidence 1 125789999998544
No 42
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.59 E-value=1.7e-14 Score=112.98 Aligned_cols=88 Identities=28% Similarity=0.397 Sum_probs=79.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....++|.|.++...+|||++.++.. ...+++|..|.+||||+++|+|++||+|++|||.++.++++++++.+|+..
T Consensus 17 ~~~~~~v~l~k~~~~~lG~~i~gg~~--~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~- 93 (125)
T 3hpk_A 17 PTVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV- 93 (125)
T ss_dssp CEEEEEEEEECCTTSCCCEEEEECSS--CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS-
T ss_pred cCCCeEEEEEeCCCCCcCEEEeccCC--CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45778899999888899999999875 357899999999999999999999999999999999999999999999997
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
++.|+|+|.+.
T Consensus 94 --~~~v~l~v~r~ 104 (125)
T 3hpk_A 94 --KGEVTIHYNKL 104 (125)
T ss_dssp --CSEEEEEEEEE
T ss_pred --CCeEEEEEEEC
Confidence 67799999873
No 43
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.59 E-value=1.1e-14 Score=112.72 Aligned_cols=89 Identities=25% Similarity=0.375 Sum_probs=78.7
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCCC----CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHH
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNKG----GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~----~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~ 107 (245)
..++.++|.|.++.+.+|||+|.++.+.. ...+++|..|.++|+|+ .| |++||+|++|||+++.++++.+++.+
T Consensus 11 ~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 11 VIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred ccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 46789999999888789999999986531 35689999999999996 55 99999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy1022 108 LREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (245)
|+.. +..+.|+|.|.
T Consensus 89 l~~~---~~~v~l~v~R~ 103 (117)
T 2csj_A 89 LRKS---GKIAAIVVKRP 103 (117)
T ss_dssp HHHS---CSEEEEEEEEE
T ss_pred HhcC---CCeEEEEEEEC
Confidence 9987 78899999984
No 44
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.59 E-value=2.5e-14 Score=107.02 Aligned_cols=90 Identities=30% Similarity=0.363 Sum_probs=77.5
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++++|.|.+. ..+|||++.++.+ ...+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 3 ~~~~~~v~l~~~-~~~lG~~i~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~- 78 (97)
T 1n7e_A 3 GAIIYTVELKRY-GGPLGITISGTEE--PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA- 78 (97)
T ss_dssp CCCEEEEEEECT-TSCCCEEEECCSS--TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-
T ss_pred CceEEEEEEEeC-CCCcCEEEEcccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 357889999654 4679999998654 247999999999999999999999999999999999999999999999865
Q ss_pred CCCCcEEEEEEecCCC
Q psy1022 113 QKPGPIKLVVAKCWDP 128 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~~ 128 (245)
+..+.|+|.|....
T Consensus 79 --g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 79 --GETVTLKIKKQTDA 92 (97)
T ss_dssp --CSEEEEEEECCCCC
T ss_pred --CCeEEEEEEeCCCC
Confidence 77899999875443
No 45
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.58 E-value=1.5e-14 Score=114.99 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=79.0
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCCC----------CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccC
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNKG----------GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENM 99 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~----------~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~ 99 (245)
+....+.++|.|.+....+|||+|.++.+.. ...+++|..|.+||+|+++| |++||+|++|||+++.++
T Consensus 22 s~~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~ 100 (132)
T 3l4f_D 22 SDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKV 100 (132)
T ss_dssp CCCCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTS
T ss_pred CCcCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCC
Confidence 3344567889999877789999999986521 12379999999999999999 999999999999999999
Q ss_pred CHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 100 SNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 100 t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++++++.+|+.. +..+.|+|.+.
T Consensus 101 ~~~~~~~~l~~~---g~~v~l~v~~~ 123 (132)
T 3l4f_D 101 GHRQVVNMIRQG---GNTLMVKVVMV 123 (132)
T ss_dssp CHHHHHHHHHHT---TTEEEEEEECC
T ss_pred CHHHHHHHHHcC---CCEEEEEEEEC
Confidence 999999999987 78899999873
No 46
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=5.4e-14 Score=107.53 Aligned_cols=99 Identities=30% Similarity=0.436 Sum_probs=86.1
Q ss_pred CCCCCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCC----CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecc
Q psy1022 22 SSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE 97 (245)
Q Consensus 22 ss~ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~ 97 (245)
|++++.+......+.+++.|.++ ..+|||+|.++.+. ....+++|..|.++|||+++| |++||+|++|||+.+.
T Consensus 2 s~~s~~~~~~~~~~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~ 79 (110)
T 1x5q_A 2 SSGSSGEPARIEEEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQ 79 (110)
T ss_dssp CCCCCCCCCCCCCEEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECT
T ss_pred CCCccCCcccCCcceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECC
Confidence 45677777777789999999877 58999999987542 136899999999999999999 9999999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 98 NMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 98 ~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++++.+++..++.. +..|.|+|.|.
T Consensus 80 ~~~~~~~~~~~~~~---g~~v~l~v~R~ 104 (110)
T 1x5q_A 80 GAEHHEAVEALRGA---GTAVQMRVWRE 104 (110)
T ss_dssp TCCHHHHHHHHHSC---CSEEEEEEEEC
T ss_pred CcCHHHHHHHhhCC---CCeEEEEEEEC
Confidence 99999999999876 78999999984
No 47
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=8.4e-15 Score=113.99 Aligned_cols=88 Identities=35% Similarity=0.568 Sum_probs=77.8
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
.+.++|.|.++. .+|||+|.++.+. .+..+++|..|.+||||+++|+|++||+|++|||.++.++++++++.+|+..
T Consensus 24 ~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~- 101 (117)
T 2fne_A 24 PQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT- 101 (117)
T ss_dssp CEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 478899998876 7899999997542 1246899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
++.|+|+|.|.
T Consensus 102 --~~~v~l~v~R~ 112 (117)
T 2fne_A 102 --KGTVTLMVLSS 112 (117)
T ss_dssp --CSSEEEEEEEC
T ss_pred --CCeEEEEEEeC
Confidence 67799999884
No 48
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=1.2e-14 Score=110.58 Aligned_cols=89 Identities=25% Similarity=0.365 Sum_probs=73.7
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC--
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ-- 113 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~-- 113 (245)
.++|.|.+. ..+|||+|.++.+. ....++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+.+..
T Consensus 7 ~~~v~l~k~-~~glG~~i~gg~~~-~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 7 GTLVRVKKS-AATLGIAIEGGANT-RQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SEEEEEECC-SSSCCEEEECBTTS-SCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred eEEEEEEcC-CCcCCeEEECCCCC-CCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 466778654 48899999998752 22345999999999999999999999999999999999999999999998521
Q ss_pred CCCcEEEEEEecC
Q psy1022 114 KPGPIKLVVAKCW 126 (245)
Q Consensus 114 ~~~~V~L~V~r~~ 126 (245)
....+.|+|.+..
T Consensus 85 ~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 85 DRDYIDFLVTEFN 97 (103)
T ss_dssp SCSEEEEEECCCC
T ss_pred CCCeEEEEEEEcc
Confidence 1567899998743
No 49
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=1.7e-14 Score=111.85 Aligned_cols=90 Identities=24% Similarity=0.427 Sum_probs=78.4
Q ss_pred ceeeEEEEEEcCC------CCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 33 SLNIITVTLNMDT------VNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 33 ~~~i~~V~L~k~~------~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
.+...+|.|.+.. ..+|||+|.++.+. ....+++|..|.++|||+++|+|++||+|++|||+++.++++++
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4577788888776 47899999998642 12348999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++.+|+.. +..|.|+|.|.
T Consensus 90 ~~~~l~~~---~~~v~l~v~R~ 108 (117)
T 1ujd_A 90 VQSIISQQ---SGEAEICVRLD 108 (117)
T ss_dssp HHHHHSCC---SSCEEEEEESS
T ss_pred HHHHHhcC---CCEEEEEEEEC
Confidence 99999986 78899999973
No 50
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.58 E-value=1.1e-14 Score=110.07 Aligned_cols=83 Identities=27% Similarity=0.390 Sum_probs=75.2
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
++.|.|.|+.+.+||+++.... +.+++|.+|.+||||+++|+|++||.|++|||.++.++++++++++|+.. +
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~---~ 85 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNE----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET---K 85 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECT----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC---C
T ss_pred cEEEEEEeCCCCCeeEEEEeCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---C
Confidence 4679999988899999998743 47899999999999999999999999999999999999999999999987 6
Q ss_pred CcEEEEEEec
Q psy1022 116 GPIKLVVAKC 125 (245)
Q Consensus 116 ~~V~L~V~r~ 125 (245)
+.++|+|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 7899999853
No 51
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.58 E-value=9.9e-15 Score=111.45 Aligned_cols=84 Identities=37% Similarity=0.549 Sum_probs=70.8
Q ss_pred EEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCC
Q psy1022 40 TLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (245)
Q Consensus 40 ~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~ 116 (245)
.+..+...+|||+|.||.+. ..+.+++|..|.+||||+++|+|++||+|++|||.++.++++++++.+++.. ++
T Consensus 6 ~~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~---~~ 82 (106)
T 4amh_A 6 HLVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT---SD 82 (106)
T ss_dssp ------CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC---CS
T ss_pred ccCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC---CC
Confidence 34455668899999998764 2345999999999999999999999999999999999999999999999987 77
Q ss_pred cEEEEEEecC
Q psy1022 117 PIKLVVAKCW 126 (245)
Q Consensus 117 ~V~L~V~r~~ 126 (245)
.|.|+|.|..
T Consensus 83 ~v~l~v~R~~ 92 (106)
T 4amh_A 83 FVYLKVAKPG 92 (106)
T ss_dssp EEEEEEECCS
T ss_pred eEEEEEEeCC
Confidence 9999999843
No 52
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.58 E-value=3.7e-14 Score=104.61 Aligned_cols=85 Identities=27% Similarity=0.427 Sum_probs=76.3
Q ss_pred ceeeEEEEEEcCCC-CcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMDTV-NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~~~-~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
..+.++|.|.+... .+|||+|.++.. ..+++|..|.+||||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLL---EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES 79 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTT---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CcceEEEEEEECCCCCCccEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46889999998764 689999998764 5799999999999999999 999999999999999999999999999876
Q ss_pred cCCCCcEEEEEEe
Q psy1022 112 VQKPGPIKLVVAK 124 (245)
Q Consensus 112 ~~~~~~V~L~V~r 124 (245)
+..+.|+|.|
T Consensus 80 ---g~~v~l~v~R 89 (91)
T 1m5z_A 80 ---GNKLDLVISR 89 (91)
T ss_dssp ---TTEEEEEEEE
T ss_pred ---CCEEEEEEEe
Confidence 7789999987
No 53
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=6.5e-15 Score=114.30 Aligned_cols=101 Identities=19% Similarity=0.295 Sum_probs=82.2
Q ss_pred CCCCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhc-CCCCCCCEEEeeCCeecccCCH
Q psy1022 23 SFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALD-GRIEPGDMILQVNDINFENMSN 101 (245)
Q Consensus 23 s~ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~-G~L~~GD~Il~VNg~~l~~~t~ 101 (245)
+++.........+.++|.|.+....+|||+|.++.+ ...+++|..|.+||||+++ |.|++||+|++|||+++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~v~l~k~~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~ 80 (119)
T 2cs5_A 3 SGSSGNGGIPHDNLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 80 (119)
T ss_dssp SCCCCCCCCCSSCCEEEEECCCSSSCCSEEEEEEGG--GTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCH
T ss_pred cccccCCCcCCCCeEEEEEEeCCCCCcCEEEecccC--CCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCH
Confidence 444444444455788999998887789999999865 2468999999999999999 4599999999999999999999
Q ss_pred HHHHHHHHhccCC-CCcEEEEEEec
Q psy1022 102 DEAVRVLREVVQK-PGPIKLVVAKC 125 (245)
Q Consensus 102 ~eav~~Lr~~~~~-~~~V~L~V~r~ 125 (245)
.+++.+++..... ...|.|+|.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 81 DQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred HHHHHHHHhccccCCCEEEEEEEcc
Confidence 9999999987210 13799999873
No 54
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.58 E-value=2.5e-14 Score=108.08 Aligned_cols=91 Identities=18% Similarity=0.271 Sum_probs=75.7
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.++++|.|.+..+.+|||+|.+........+++|.+|.+||||+++|.|++||+|++|||+.+.++++++++++|+...
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~- 86 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK- 86 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT-
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 4678899988777899999986321112347999999999999997779999999999999999999999999999841
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
.+..|+|+|.|+
T Consensus 87 ~g~~v~l~v~R~ 98 (101)
T 2yt7_A 87 SQTSVTLSIVHC 98 (101)
T ss_dssp TSSEEEEEECCC
T ss_pred CCCeEEEEEEeC
Confidence 167899999874
No 55
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.8e-14 Score=106.08 Aligned_cols=86 Identities=24% Similarity=0.410 Sum_probs=74.6
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|.|.++. .+|||++.++.+ ...+++|..|.++|||+++|+|++||.|++|||.++.++++++++.+|+....
T Consensus 2 ~~~~v~l~~~~-~g~G~~~~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~- 77 (90)
T 2q9v_A 2 MEQDIFLWRKE-TGFGFRILGGNE--PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK- 77 (90)
T ss_dssp EEEEEEEECBT-TBCCEEEEECSS--TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH-
T ss_pred CcEEEEEEECC-CccCEEEEcccc--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-
Confidence 45788898776 789999999764 24679999999999999999999999999999999999999999999988621
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
++.|.|+|.|
T Consensus 78 ~~~v~l~v~R 87 (90)
T 2q9v_A 78 QGHVNLTVRQ 87 (90)
T ss_dssp HTEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 2379999987
No 56
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.57 E-value=4.4e-14 Score=108.92 Aligned_cols=84 Identities=21% Similarity=0.398 Sum_probs=76.0
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.++++|.|.+....+|||.+.+. ..+++|..|.+||||+++|.|++||+|++|||+.+.++++++++.+|+..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~-----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 96 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE-----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM-- 96 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC-----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--
T ss_pred CceEEEEEEeCCCCceeEEEEeC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 47888999998877999999874 57899999999999999995599999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
.+.+.|+|.+.
T Consensus 97 -~~~v~l~v~r~ 107 (113)
T 1va8_A 97 -HGTLTFVLIPS 107 (113)
T ss_dssp -CEEEEEEEECC
T ss_pred -CCeEEEEEEEC
Confidence 67899999874
No 57
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2.3e-14 Score=108.45 Aligned_cols=89 Identities=24% Similarity=0.395 Sum_probs=77.9
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.++|.|.++. .+|||.|.++.+.....+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+|+..
T Consensus 9 ~~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 86 (104)
T 2djt_A 9 ASGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG- 86 (104)
T ss_dssp CCCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT-
T ss_pred CCceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4577889998775 78999999865422257899999999999999999999999999999999999999999999886
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 87 --g~~v~l~v~R~ 97 (104)
T 2djt_A 87 --GPQLHLVIRRP 97 (104)
T ss_dssp --CSEEEEEECCC
T ss_pred --CCeEEEEEEEC
Confidence 78899999874
No 58
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=6.5e-14 Score=108.89 Aligned_cols=89 Identities=35% Similarity=0.557 Sum_probs=79.3
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCC---CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
....++|.|.++. .+|||+|.++.+.. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 15 ~~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 15 LVTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CCceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3588889999877 88999999976521 2679999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy1022 110 EVVQKPGPIKLVVAKC 125 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (245)
.. +..|.|+|.|.
T Consensus 94 ~~---g~~v~l~v~R~ 106 (120)
T 2eno_A 94 NA---GYAVSLRVQHR 106 (120)
T ss_dssp HH---CSEEEEEEEEE
T ss_pred cC---CCeEEEEEEeC
Confidence 87 77899999984
No 59
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.57 E-value=3.5e-14 Score=112.54 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=76.8
Q ss_pred eeeEEEEEEcC---------CCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 34 LNIITVTLNMD---------TVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 34 ~~i~~V~L~k~---------~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
..+..+.|.+. ...+|||+|.++.+. .+..++||..|.+||||+++|+|++||+|++|||+++.++++++
T Consensus 26 ~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~ 105 (131)
T 1wfg_A 26 RLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEE 105 (131)
T ss_dssp EEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHH
T ss_pred ceeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 35566667655 578899999997653 23459999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++.+|+.+.. +..|.|+|.|.
T Consensus 106 ~~~~l~~~~~-g~~v~l~v~R~ 126 (131)
T 1wfg_A 106 VYNIILESKP-EPQVELVVSRS 126 (131)
T ss_dssp HHHHHHHTSS-SSEEEEEEEEE
T ss_pred HHHHHHhcCC-CCEEEEEEEcC
Confidence 9999998621 47899999884
No 60
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.56 E-value=1.1e-14 Score=112.62 Aligned_cols=90 Identities=27% Similarity=0.488 Sum_probs=79.5
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecc-cCCHHHHHHHHHh
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE-NMSNDEAVRVLRE 110 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~-~~t~~eav~~Lr~ 110 (245)
..++++|.|.+....+|||++.++.+. ....+++|..|.+||||+++|+|++||+|++|||.++. ++++++++.+|+.
T Consensus 18 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 18 GRHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp TSCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 357899999988778999999987642 23468999999999999999999999999999999998 9999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..|.|+|.|.
T Consensus 98 ~---~~~v~l~v~R~ 109 (117)
T 2o2t_A 98 A---KDTVQLVIARG 109 (117)
T ss_dssp C---CSEEEEEEESS
T ss_pred C---CCEEEEEEEeC
Confidence 6 78899999974
No 61
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.56 E-value=3.6e-14 Score=107.07 Aligned_cols=87 Identities=25% Similarity=0.502 Sum_probs=77.5
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
....+.++|.|.+.. .+|||++.++.+ ..+++|..|.+||||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 7 ~~~~~~~~v~l~k~~-~glG~~~~~~~~---~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (104)
T 3i4w_A 7 DIPREPRRIVIHRGS-TGLGFNIVGGEX---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN 82 (104)
T ss_dssp CCCSSCEEEEEECBT-TBTSEEEEECC----CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCCCccEEEEEEeCC-CccCEEEECCCC---CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345577889998874 789999999754 4699999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEe
Q psy1022 111 VVQKPGPIKLVVAK 124 (245)
Q Consensus 111 ~~~~~~~V~L~V~r 124 (245)
. +..+.|+|.+
T Consensus 83 ~---~~~v~l~v~r 93 (104)
T 3i4w_A 83 A---GQTVTIIAQY 93 (104)
T ss_dssp S---CSEEEEEEEE
T ss_pred C---CCeEEEEEEE
Confidence 7 7889999987
No 62
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.56 E-value=6.4e-14 Score=106.66 Aligned_cols=91 Identities=41% Similarity=0.706 Sum_probs=79.4
Q ss_pred CceeeEEEEEE-cCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHH
Q psy1022 32 MSLNIITVTLN-MDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (245)
Q Consensus 32 ~~~~i~~V~L~-k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~ 107 (245)
..++.++|.|. +....+|||++.++.+. ....+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+
T Consensus 9 ~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 9 SGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred cCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35788999996 46678999999987542 135699999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy1022 108 LREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (245)
|+.. +..|.|+|.|.
T Consensus 89 l~~~---g~~v~l~v~R~ 103 (108)
T 2jre_A 89 LRNA---GNPVRLLLIRR 103 (108)
T ss_dssp HHHH---CSEEEEEEEEC
T ss_pred HHcC---CCeEEEEEEeC
Confidence 9986 78899999873
No 63
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.56 E-value=2.3e-14 Score=108.94 Aligned_cols=89 Identities=37% Similarity=0.555 Sum_probs=76.5
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
...++++|.| +. ..+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 8 ~~~~~~~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 8 KEPEIITVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp --CCEEEEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3467888888 44 58899999986532 235789999999999999999999999999999999999999999999988
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..+.|+|.|.
T Consensus 86 ~---g~~v~l~v~R~ 97 (106)
T 3axa_A 86 T---SSVVTLEVAKQ 97 (106)
T ss_dssp C---CSEEEEEEECC
T ss_pred C---CCeEEEEEEeC
Confidence 6 78899999973
No 64
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.6e-14 Score=105.72 Aligned_cols=85 Identities=29% Similarity=0.510 Sum_probs=75.3
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
...++|.|.+.. .+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||+++.++++++++.+++..
T Consensus 4 ~~~r~v~l~k~~-~glG~~l~~~~~--~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-- 78 (93)
T 2dkr_A 4 GSSGVVELPKTD-EGLGFNIMGGKE--QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA-- 78 (93)
T ss_dssp SCSCEEEEECCT-TCCCEEEECSSS--SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC--
T ss_pred CCCEEEEEEeCC-CCccEEEecccC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 456788998765 889999998764 367999999999999999977999999999999999999999999999987
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..+.|+|.+
T Consensus 79 -~~~v~l~v~r 88 (93)
T 2dkr_A 79 -QGSVKLVVRS 88 (93)
T ss_dssp -CSEEEEEECC
T ss_pred -CCcEEEEEEe
Confidence 6789999986
No 65
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.56 E-value=9.4e-15 Score=115.18 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=78.6
Q ss_pred CceeeEEEEEEcCC-CCcccEEEEcccCC-------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 32 MSLNIITVTLNMDT-VNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 32 ~~~~i~~V~L~k~~-~~~LG~sI~gg~~~-------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
.....++|.|.+.+ +.+|||+|.++.+. ....+++|..|.+||+|+++|+|++||+|++|||.++.++++++
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 44577889998875 58899999987531 01258999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEecC
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~~ 126 (245)
++.+|+.. ++.|.|+|.+..
T Consensus 106 ~~~~l~~~---~~~v~l~v~r~~ 125 (128)
T 1nf3_C 106 VTDMMIAN---SRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHT---TTSEEEEEECCC
T ss_pred HHHHHHcC---CCeEEEEEEECC
Confidence 99999987 678999998743
No 66
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=5.2e-14 Score=107.60 Aligned_cols=89 Identities=29% Similarity=0.471 Sum_probs=79.0
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
+.+.++|.|.++. .+|||+|.++.+. ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 6 ~~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (110)
T 1um1_A 6 SGYVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG 84 (110)
T ss_dssp CCCEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC
T ss_pred CCcEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4578999998876 7899999997643 2357899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 85 ---~~~v~l~v~R~ 95 (110)
T 1um1_A 85 ---GKKMRFLVAKS 95 (110)
T ss_dssp ---CSEEEEEEECC
T ss_pred ---CCeEEEEEEeC
Confidence 78899999973
No 67
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.56 E-value=3.7e-14 Score=106.01 Aligned_cols=87 Identities=21% Similarity=0.321 Sum_probs=75.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEc-cc----CCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVG-QS----NKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~g-g~----~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
.+.++|.|.+.+..+|||+|.+ +. +.....+++|..|.++|||+++| |++||+|++|||+++.++++++++.+|
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678899999888899999997 11 10234689999999999999999 999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEe
Q psy1022 109 REVVQKPGPIKLVVAK 124 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r 124 (245)
+.. ++.+.|+|.+
T Consensus 82 ~~~---~~~v~l~v~~ 94 (96)
T 2ego_A 82 KAS---GNVLRLETLY 94 (96)
T ss_dssp HHT---TTEEEEEEEC
T ss_pred HhC---CCeEEEEEEE
Confidence 987 6789999875
No 68
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.55 E-value=4.7e-14 Score=105.47 Aligned_cols=89 Identities=27% Similarity=0.386 Sum_probs=78.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCC----CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKG----GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~----~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
..+++|.|.+.+..+|||+|.++.+.. ...+++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+|+
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 356789999877789999999876521 1348999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy1022 110 EVVQKPGPIKLVVAKC 125 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (245)
.. +..+.|+|.|.
T Consensus 84 ~~---g~~v~l~v~R~ 96 (98)
T 1ihj_A 84 EA---DFKIELEIQTF 96 (98)
T ss_dssp HS---CSEEEEEEEEC
T ss_pred cC---CCeEEEEEEeC
Confidence 86 78999999873
No 69
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.55 E-value=1.2e-13 Score=104.88 Aligned_cols=92 Identities=26% Similarity=0.383 Sum_probs=80.1
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCC----CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav 105 (245)
+.+.++.++|.|.++++.+|||+|.++.+. ....+++|..|.+||||+ .| |++||+|++|||+++.++++.+++
T Consensus 2 s~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~ 79 (107)
T 2h2b_A 2 SHMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAV 79 (107)
T ss_dssp CCCCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHH
Confidence 456789999999999889999999987642 135699999999999999 66 999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEecC
Q psy1022 106 RVLREVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 106 ~~Lr~~~~~~~~V~L~V~r~~ 126 (245)
..++.. +..+.|+|.|..
T Consensus 80 ~~~~~~---g~~v~l~v~R~~ 97 (107)
T 2h2b_A 80 QQLRKS---GKNAKITIRRKK 97 (107)
T ss_dssp HHHHTC---CSEEEEEEEEES
T ss_pred HHhhCC---CCEEEEEEEECC
Confidence 888866 788999998843
No 70
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.55 E-value=5.6e-14 Score=109.95 Aligned_cols=88 Identities=28% Similarity=0.454 Sum_probs=78.5
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++++|.|.++ ..+|||+|.++.+ ....+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 23 ~~~~~~v~l~k~-~~glG~~l~~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~- 99 (124)
T 2daz_A 23 PGELHIIELEKD-KNGLGLSLAGNKD-RSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA- 99 (124)
T ss_dssp SSEEEEEEEECC-SSCCCEEEECBSS-TTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-
T ss_pred CCceEEEEEEeC-CCccCEEEeccCC-CCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 357889999887 4789999999765 2347999999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..|.|+|.|.
T Consensus 100 --~~~v~l~v~R~ 110 (124)
T 2daz_A 100 --PSKVKLVFIRN 110 (124)
T ss_dssp --CSEEEEEEEEC
T ss_pred --CCeEEEEEEeC
Confidence 67899999984
No 71
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.55 E-value=3e-14 Score=106.71 Aligned_cols=84 Identities=20% Similarity=0.375 Sum_probs=76.6
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
.++.++|.|.++...+|||++.+. ..+++|..|.+||||+++|+|++||.|++|||+++.++++.+++.+++..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~- 79 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA- 79 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC-----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-
T ss_pred HCceEEEEEEeCCCCCccEEEEeC-----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 568889999887778999999872 57899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEe
Q psy1022 113 QKPGPIKLVVAK 124 (245)
Q Consensus 113 ~~~~~V~L~V~r 124 (245)
++.|.|+|.|
T Consensus 80 --~~~v~l~v~R 89 (96)
T 2qkv_A 80 --NGKVSMEVTR 89 (96)
T ss_dssp --SSEEEEEEEC
T ss_pred --CCcEEEEEEe
Confidence 6789999987
No 72
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.55 E-value=8e-14 Score=102.83 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=73.0
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
++.++|.|.+.. .+|||++.++.+ ..+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 2 ~~~r~v~l~r~~-~g~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 74 (91)
T 1g9o_A 2 MLPRLCCLEKGP-NGYGFHLHGEKG---KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA-- 74 (91)
T ss_dssp CCCEEEEEECBT-TBCCEEEEECTT---CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CccEEEEEEeCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356789998876 689999998754 5799999999999999999 999999999999999999999999999987
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
++.+.+.+.+
T Consensus 75 -~~~~~~~~~~ 84 (91)
T 1g9o_A 75 -LNAVRLLVVD 84 (91)
T ss_dssp -SSEEEEEEEC
T ss_pred -CCcEEEEEEc
Confidence 6667666664
No 73
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.54 E-value=8.2e-14 Score=101.50 Aligned_cols=84 Identities=25% Similarity=0.469 Sum_probs=72.0
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCC
Q psy1022 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (245)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~ 116 (245)
++|.|.++. .+|||++.++.+ ...+++|..|.+||||+++|+|++||+|++|||.++.+++++++.++|+... .+.
T Consensus 2 ~~v~l~k~~-~g~G~~i~~~~~--~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~g~ 77 (85)
T 2i04_A 2 IHTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP-IGA 77 (85)
T ss_dssp EEEEEECBT-TBSSEEEEECCS--TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC-TTC
T ss_pred EEEEEEECC-CCCCEEEEcccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCC
Confidence 567887765 789999998654 3578999999999999999999999999999999999999999999998762 146
Q ss_pred cEEEEEEe
Q psy1022 117 PIKLVVAK 124 (245)
Q Consensus 117 ~V~L~V~r 124 (245)
.+.|+|.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 78888864
No 74
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=7.8e-14 Score=107.49 Aligned_cols=93 Identities=24% Similarity=0.316 Sum_probs=79.0
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCCC--C---CCCEEEEeecCCChhhh-cCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNKG--G---DGGIYVGSIMKGGAVAL-DGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~--~---~~gi~I~~V~~Gg~A~~-~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
++..++.++|.|.+....+|||+|.++.+.. + ..+++|..|.+||||++ +| |++||+|++|||+.+.++++++
T Consensus 5 ~~~~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~ 83 (114)
T 1uew_A 5 SSGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHAD 83 (114)
T ss_dssp CSCCCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHH
T ss_pred CCCcccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHH
Confidence 3446788999999887789999999875421 1 12679999999999999 66 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEecC
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~~ 126 (245)
++++|+.. +..+.|+|.|..
T Consensus 84 ~~~~l~~~---g~~v~l~v~r~~ 103 (114)
T 1uew_A 84 IVKLIKDA---GLSVTLRIIPQE 103 (114)
T ss_dssp HHHHHHHT---TTEEEEEECCCS
T ss_pred HHHHHHcC---CCeEEEEEEeCC
Confidence 99999985 788999998743
No 75
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.54 E-value=3.4e-14 Score=109.12 Aligned_cols=89 Identities=29% Similarity=0.556 Sum_probs=77.9
Q ss_pred ceeeEEEEEEcCCCCcccEEEEc---ccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVG---QSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~g---g~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
.++.++|.|.++. .+|||+|.+ +.+. ....+++|..|.+||||+++|+|++||+|++|||.++.++++.+++.++
T Consensus 2 ~~~~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 2 HMELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CCEEEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred CeEEEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3578889998765 789999998 3321 2357999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEec
Q psy1022 109 REVVQKPGPIKLVVAKC 125 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r~ 125 (245)
+.. +..+.|+|.|.
T Consensus 81 ~~~---g~~v~l~v~R~ 94 (113)
T 2g5m_B 81 RNT---KGRVRFMIGRE 94 (113)
T ss_dssp HHS---CSSCEEEEEEC
T ss_pred hcC---CCeEEEEEEeC
Confidence 987 78899999984
No 76
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.54 E-value=1.4e-13 Score=102.91 Aligned_cols=86 Identities=35% Similarity=0.550 Sum_probs=75.6
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|.|.++. .+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 4 ~~~~v~l~~~~-~~lG~~l~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 78 (98)
T 2opg_A 4 CETTIEISKGR-TGLGLSIVGGSDT-LLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT--- 78 (98)
T ss_dssp EEEEEEEECBT-TBTCEEEEECTTS-TTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC---
T ss_pred CEEEEEEEECC-CcccEEEecCCCC-CCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 45778898774 7899999987641 226999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 79 ~~~v~l~v~R~ 89 (98)
T 2opg_A 79 PQRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEcC
Confidence 67899999874
No 77
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.54 E-value=1.7e-13 Score=108.02 Aligned_cols=90 Identities=23% Similarity=0.431 Sum_probs=77.8
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
...+.++|.|.++. .+|||++.++.+ ...+++|..|.+||+|+++|+|++||+|++|||+++.++++++++++|+..
T Consensus 15 ~~g~~~~v~l~~~~-~g~G~~i~g~~~--~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 15 LKGKFIHTKLRKSS-RGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp SCSEEEEEEEEECS-SCCSEEEEEEEE--TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred cCCcEEEEEEEECC-CcccEEEeCccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34577888998765 789999999654 356899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
. .+..|.|+|.|.
T Consensus 92 ~-~g~~v~l~v~R~ 104 (129)
T 2kpk_A 92 P-IGASVDLELCRG 104 (129)
T ss_dssp C-TTEEEEEEEEEC
T ss_pred C-CCCeEEEEEEeC
Confidence 2 145699999984
No 78
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=7.9e-14 Score=103.18 Aligned_cols=81 Identities=23% Similarity=0.356 Sum_probs=72.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.++|.|.++. .+|||.+.+ ..+++|..|.+||||+++| |++||.|++|||.++.++++.+++.+|+..
T Consensus 2 ~~~r~v~l~~~~-~g~G~~l~~------~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-- 71 (91)
T 2f5y_A 2 MRYRQITIPRGK-DGFGFTICC------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC-- 71 (91)
T ss_dssp CEEEEEEEECBT-TBTSEEEEC------SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CceEEEEEEeCC-CCccEEEec------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 467889998775 789999987 4569999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 72 -~~~v~l~v~R~ 82 (91)
T 2f5y_A 72 -PSEIILLVWRM 82 (91)
T ss_dssp -SSEEEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 67899999884
No 79
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.54 E-value=7.9e-14 Score=102.76 Aligned_cols=83 Identities=22% Similarity=0.342 Sum_probs=74.9
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
...++|.|.++. .+|||++.++.+ ..+++|..|.+||||+++| |++||+|++|||.++.++++++++++|+..
T Consensus 3 ~~~r~v~l~k~~-~g~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 75 (90)
T 2he4_A 3 LRPRLCHLRKGP-QGYGFNLHSDKS---RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR-- 75 (90)
T ss_dssp TCCEEEEEECBT-TBCCEEEEECSS---SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS--
T ss_pred CCcEEEEEEECC-CCccEEEEccCC---CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356788998876 689999998754 5789999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..+.|+|.+
T Consensus 76 -~~~v~l~v~r 85 (90)
T 2he4_A 76 -EDEARLLVVG 85 (90)
T ss_dssp -SSEEEEEEEC
T ss_pred -CCcEEEEEEc
Confidence 7889999987
No 80
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.54 E-value=2.1e-14 Score=126.91 Aligned_cols=90 Identities=30% Similarity=0.331 Sum_probs=80.4
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++++|.|.|....+|||+|.|+.+ ...++||..|.+||||++++.|++||+|++|||+++.+++|++++.+|+..
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d--~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~- 151 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT- 151 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETT--TTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-
Confidence 34789999999878999999999875 357899999999999999655999999999999999999999999999998
Q ss_pred CCCCcEEEEEEecCC
Q psy1022 113 QKPGPIKLVVAKCWD 127 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~ 127 (245)
++.|+|+|.+..+
T Consensus 152 --g~~V~L~V~R~~~ 164 (263)
T 1z87_A 152 --GKEVVLEVKYMKE 164 (263)
T ss_dssp --CSCCCEEEECCSS
T ss_pred --CCeEEEEEEeCcc
Confidence 7889999998443
No 81
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=3.8e-14 Score=108.00 Aligned_cols=88 Identities=38% Similarity=0.596 Sum_probs=78.2
Q ss_pred eeeEEEEEEcCCCCcccEEEE-----cccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIV-----GQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~-----gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~ 107 (245)
.+.++|.|.++. .+|||+|. ++.+. ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 478899998775 78999999 76543 235799999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy1022 108 LREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (245)
++.. +..+.|+|.|.
T Consensus 87 ~~~~---g~~v~l~v~R~ 101 (108)
T 1q7x_A 87 LRNT---GQVVHLLLEKG 101 (108)
T ss_dssp HHHT---TSEEEEEEECC
T ss_pred HHcC---CCeEEEEEEeC
Confidence 9987 78899999974
No 82
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.54 E-value=7.5e-14 Score=107.46 Aligned_cols=86 Identities=23% Similarity=0.422 Sum_probs=76.4
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.++|.|.++. .+|||+|.++.+ ...+++|..|.+||+|+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 22 ~~~~~~v~l~~~~-~glG~~l~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~- 97 (112)
T 2r4h_A 22 SMDFYTVELERGA-KGFGFSLRGGRE--YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG- 97 (112)
T ss_dssp -CCEEEEEEECBT-TBTSEEEEECGG--GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred CCceEEEEEEcCC-CccCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3578889998765 789999998754 257999999999999999999999999999999999999999999999886
Q ss_pred CCCCcEEEEEEe
Q psy1022 113 QKPGPIKLVVAK 124 (245)
Q Consensus 113 ~~~~~V~L~V~r 124 (245)
+..|.|+|.|
T Consensus 98 --g~~v~l~v~R 107 (112)
T 2r4h_A 98 --GRRVRLFLKR 107 (112)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCeEEEEEEe
Confidence 7789999986
No 83
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2.8e-14 Score=109.28 Aligned_cols=95 Identities=29% Similarity=0.450 Sum_probs=82.9
Q ss_pred CCCCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHH
Q psy1022 23 SFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSND 102 (245)
Q Consensus 23 s~ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~ 102 (245)
+.++........+.++|.|.+.. .+|||+|.++.+ ..+++|..|.++++|+++|+|++||+|++|||+.+.++++.
T Consensus 3 ~~s~~~~~~~~~~~~~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~ 78 (113)
T 1um7_A 3 SGSSGRPGGDAREPRKIILHKGS-TGLGFNIVGGED---GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHE 78 (113)
T ss_dssp CCCCCCCCCCCCSEEEEEEECCS-SCSSBCCBCCST---TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHH
T ss_pred CCCCCCCCcCCCceEEEEEEECC-CcccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 44555556667789999998765 789999998754 57999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEEEe
Q psy1022 103 EAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 103 eav~~Lr~~~~~~~~V~L~V~r 124 (245)
+++.+++.. +..+.|+|.+
T Consensus 79 ~~~~~~~~~---~~~v~l~v~r 97 (113)
T 1um7_A 79 QAAAALKRA---GQSVTIVAQY 97 (113)
T ss_dssp HHHHHHHSC---CSEEEEEEEC
T ss_pred HHHHHHHhC---CCcEEEEEEE
Confidence 999999876 7889999986
No 84
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2.1e-14 Score=108.17 Aligned_cols=88 Identities=20% Similarity=0.389 Sum_probs=76.8
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.+++.|.++. .+|||.+.++.+ ...+++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 9 ~~~~~~v~l~~~~-~g~G~~~~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 84 (103)
T 1wfv_A 9 DFDYFTVDMEKGA-KGFGFSIRGGRE--YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG- 84 (103)
T ss_dssp CSCCEECCEECCT-TSSSBCCEEETT--TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH-
T ss_pred CceEEEEEEecCC-CcCCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4577888887765 679999998764 245899999999999999999999999999999999999999999999976
Q ss_pred CCCCcEEEEEEecC
Q psy1022 113 QKPGPIKLVVAKCW 126 (245)
Q Consensus 113 ~~~~~V~L~V~r~~ 126 (245)
+..+.|+|.|..
T Consensus 85 --g~~v~l~v~R~~ 96 (103)
T 1wfv_A 85 --GRRVRLLLKRGT 96 (103)
T ss_dssp --CSEECEEEECTT
T ss_pred --CCeEEEEEEECC
Confidence 788999998743
No 85
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=101.92 Aligned_cols=84 Identities=19% Similarity=0.315 Sum_probs=73.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
++.++|.+.. ..+|||++.++.+ ...+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 2 ~~~~~v~~~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 74 (89)
T 2q3g_A 2 MDSFKVVLEG--PAPWGFRLQGGKD--FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC-- 74 (89)
T ss_dssp EEEEEEEEES--SSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC--
T ss_pred ccEEEEEEcC--CCcccEEEECcCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 4667788753 4789999998765 35689999999999999999 999999999999999999999999999887
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 75 -g~~v~l~v~R~ 85 (89)
T 2q3g_A 75 -GERLSLGLSRA 85 (89)
T ss_dssp -TTEEEEEEEEE
T ss_pred -CCEEEEEEEeC
Confidence 67899999874
No 86
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=1.3e-13 Score=103.96 Aligned_cols=90 Identities=27% Similarity=0.500 Sum_probs=75.0
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav 105 (245)
.++.++|.|.+.....|||++.+..+. ....+++|..|.+||||+++|+|++||.|++|||+++.++++++++
T Consensus 2 ~ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (103)
T 2fcf_A 2 SMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 81 (103)
T ss_dssp CCSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 346689999988778899999985432 1125899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEec
Q psy1022 106 RVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 106 ~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.+|+.. ++.+.|+|.+.
T Consensus 82 ~~l~~~---~~~v~l~v~r~ 98 (103)
T 2fcf_A 82 EAIRKA---GNPVVFMVQSI 98 (103)
T ss_dssp HHHHTC---CSSEEEEEECC
T ss_pred HHHHhC---CCcEEEEEEEC
Confidence 999987 66899999873
No 87
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.53 E-value=9.7e-14 Score=101.64 Aligned_cols=82 Identities=24% Similarity=0.417 Sum_probs=71.6
Q ss_pred EEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCc
Q psy1022 38 TVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGP 117 (245)
Q Consensus 38 ~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~ 117 (245)
++++.+....+|||.+.++.+ ...+++|..|.++|||+++| |++||.|++|||+.+.+++++++.++|+.. ...
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~ 76 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRD--FHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQS---PSP 76 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGG--GTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTC---CSS
T ss_pred EEEEEECCCCccCEEEecccC--CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCe
Confidence 445554556889999998765 25689999999999999999 999999999999999999999999999987 578
Q ss_pred EEEEEEec
Q psy1022 118 IKLVVAKC 125 (245)
Q Consensus 118 V~L~V~r~ 125 (245)
+.|+|.|.
T Consensus 77 v~l~v~R~ 84 (87)
T 2pa1_A 77 LRLQLDRI 84 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999884
No 88
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.52 E-value=9.1e-14 Score=108.09 Aligned_cols=88 Identities=24% Similarity=0.381 Sum_probs=73.2
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC-
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ- 113 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~- 113 (245)
.+..+.+.+. .+|||+|.++.+. ..+.++|.+|.+||||+++|.|++||+|++|||+++.+++|++++++|+....
T Consensus 18 ~~~~~~~~~~--~glG~~i~gg~~~-~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 18 DVRLLRIKKE--GSLDLALEGGVDS-PVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CEEEEEEESC--SCCCCEEEEBTTS-SSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred eEEEEEECCC--CccCEEEEcccCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 4566677654 4899999998652 34569999999999999996699999999999999999999999999987521
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
.+..|+|+|.|+
T Consensus 95 ~g~~v~l~v~r~ 106 (118)
T 1v6b_A 95 GGDWIDLVVAVC 106 (118)
T ss_dssp TCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 256899999984
No 89
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.52 E-value=6.9e-14 Score=102.55 Aligned_cols=83 Identities=20% Similarity=0.407 Sum_probs=73.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.++|.| +++ .+|||++.++.+ ...+++|..|.+||||+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 2 ~~~~~v~l-~~~-~~~G~~l~~g~~--~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 74 (88)
T 2uzc_A 2 MSNYSVSL-VGP-APWGFRLQGGKD--FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC-- 74 (88)
T ss_dssp CCEEEEEE-ESS-SCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CcEEEEEE-cCC-CcccEEEECcCC--CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 45678888 343 689999999775 35689999999999999999 999999999999999999999999999876
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..+.|+|.|
T Consensus 75 -g~~v~l~v~R 84 (88)
T 2uzc_A 75 -TGSLNMTLQR 84 (88)
T ss_dssp -CSEEEEEEEC
T ss_pred -CCeEEEEEEe
Confidence 7789999987
No 90
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.52 E-value=1.7e-13 Score=104.72 Aligned_cols=88 Identities=20% Similarity=0.305 Sum_probs=76.2
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCC----------CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKG----------GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~----------~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
.+..+|.|.+....+|||+|.++.+.. ...+++|..|.+||+|+++| |++||+|++|||+.+.++++++
T Consensus 6 ~~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~ 84 (109)
T 1q3o_A 6 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 84 (109)
T ss_dssp EEEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHH
T ss_pred cCcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 366789998777789999999876421 12379999999999999999 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEec
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++.+|+.. +..+.|+|.+.
T Consensus 85 ~~~~l~~~---~~~v~l~v~~~ 103 (109)
T 1q3o_A 85 VVNMIRQG---GNTLMVKVVMV 103 (109)
T ss_dssp HHHHHHHT---TTEEEEEEEEE
T ss_pred HHHHHHhC---CCEEEEEEEEC
Confidence 99999987 67899999874
No 91
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.51 E-value=1.4e-13 Score=102.62 Aligned_cols=87 Identities=16% Similarity=0.259 Sum_probs=75.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
...++|.|.++. .+|||++.+..+.....+++|..|.++|||+++| |++||.|++|||..+.++++++++.+|+..
T Consensus 2 ~~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-- 77 (96)
T 2v90_A 2 MKPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ-- 77 (96)
T ss_dssp CCCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT--
T ss_pred CCCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356889998876 6899999985432234589999999999999999 999999999999999999999999999986
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 78 -g~~v~l~v~r~ 88 (96)
T 2v90_A 78 -GSCVSLTVVDP 88 (96)
T ss_dssp -TTEEEEEEECC
T ss_pred -CCEEEEEEECC
Confidence 78899999973
No 92
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.51 E-value=2.7e-13 Score=103.02 Aligned_cols=88 Identities=26% Similarity=0.369 Sum_probs=74.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCC----------CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGG----------DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDE 103 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~----------~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~e 103 (245)
.+.++|.|.+.. .+|||+|.++.+..+ ...+||..|.++|||+++| |++||+|++|||.++.++++++
T Consensus 5 ~~~r~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 5 GSPRVVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp -CCEEEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CCcEEEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 356788998876 589999999754211 2345799999999999999 9999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEEEecC
Q psy1022 104 AVRVLREVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 104 av~~Lr~~~~~~~~V~L~V~r~~ 126 (245)
++.+|+.. +..+.|+|.+..
T Consensus 83 ~~~~l~~~---g~~v~l~v~r~~ 102 (107)
T 3qe1_A 83 VVDLIRAG---EKELILTVLSVE 102 (107)
T ss_dssp HHHHHHHC---SSEEEEEEECSS
T ss_pred HHHHHHcC---CCEEEEEEEcCC
Confidence 99999986 788999999743
No 93
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.51 E-value=7.3e-13 Score=101.21 Aligned_cols=91 Identities=32% Similarity=0.536 Sum_probs=76.9
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
..+.+.+.+.++. .+|||+|.++.+. ....+++|..|.+||||+++|+|++||+|++|||+.+.++++++++.+|+..
T Consensus 9 ~~~~~~~~l~~~~-~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 9 VGKRLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp SCEEEEEEEECBT-TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred cCcEEEEEEEECC-CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4677888887664 7899999986532 2237899999999999999999999999999999999999999999999975
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
. .+..|.|+|.|.
T Consensus 88 ~-~g~~v~l~v~R~ 100 (111)
T 2koj_A 88 K-MEGTVSLLVFRQ 100 (111)
T ss_dssp C-CSSEEEEEEEEC
T ss_pred C-CCCeEEEEEEeC
Confidence 2 156799999884
No 94
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=6.2e-14 Score=104.15 Aligned_cols=83 Identities=23% Similarity=0.343 Sum_probs=74.3
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
.+++|.|.|....+|||++.+. ..+++|..|.++|||+++|.|++||+|++|||.++ +.++++++++|+..
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~-----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~--- 76 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE-----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA--- 76 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES-----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC---
T ss_pred CcEEEEEEECCCCcEeEEEEec-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC---
Confidence 5567888887788999999982 57899999999999999988999999999999999 99999999999986
Q ss_pred CCcEEEEEEecC
Q psy1022 115 PGPIKLVVAKCW 126 (245)
Q Consensus 115 ~~~V~L~V~r~~ 126 (245)
++.+.|+|.+..
T Consensus 77 ~~~v~l~v~~~~ 88 (91)
T 2e7k_A 77 SGSVILKILSGP 88 (91)
T ss_dssp CSSBCEEEECCS
T ss_pred CCeEEEEEEECC
Confidence 678999998743
No 95
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=4.3e-13 Score=104.65 Aligned_cols=95 Identities=20% Similarity=0.238 Sum_probs=80.8
Q ss_pred CCCceeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHH
Q psy1022 30 SSMSLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (245)
Q Consensus 30 s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~ 107 (245)
.....+.++|.|.++...+|||+|.++... ....+++|..|.+++||+++|.|++||+|++|||+.+.++++++++++
T Consensus 10 ~~~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 10 QVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp CCCCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred ccccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344578999999988789999999986321 135679999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEec
Q psy1022 108 LREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~ 125 (245)
|+... .+..+.|+|.|.
T Consensus 90 l~~~~-~g~~v~l~v~R~ 106 (122)
T 1v5q_A 90 LRDSS-ITSKVTLEIEFD 106 (122)
T ss_dssp HHHHT-TTTCEEEEEEEE
T ss_pred HHhCC-CCCeEEEEEEEC
Confidence 99862 146899999984
No 96
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.50 E-value=1.7e-13 Score=101.17 Aligned_cols=76 Identities=29% Similarity=0.470 Sum_probs=67.4
Q ss_pred EEEEEc-CCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCC
Q psy1022 38 TVTLNM-DTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (245)
Q Consensus 38 ~V~L~k-~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~ 116 (245)
.|.|.+ .....|||.+.+ ++||.+|.+||+|+++|+|++||+|++|||+++.++++++++++|+.. ++
T Consensus 3 ~v~l~~~~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~---~~ 71 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS---RG 71 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT---TT
T ss_pred EEEEEeCCCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CC
Confidence 455654 445679999864 689999999999999999999999999999999999999999999998 78
Q ss_pred cEEEEEEe
Q psy1022 117 PIKLVVAK 124 (245)
Q Consensus 117 ~V~L~V~r 124 (245)
.+.|++.+
T Consensus 72 ~v~L~v~~ 79 (88)
T 3e17_A 72 KLQLVVLR 79 (88)
T ss_dssp EEEEEECC
T ss_pred eEEEEEeC
Confidence 89999985
No 97
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.49 E-value=1.8e-13 Score=103.81 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=74.7
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
.+.|.|.+.+..+|||.+..+.+ ..+++|..|.+||||+++| |++||.|++|||.++.++++++++.+|+.. +
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g 74 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS---G 74 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT---CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHT---T
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC---CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---C
Confidence 36788888888899999998764 6789999999999999999 999999999999999999999999999976 7
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
..+.|+|.+
T Consensus 75 ~~v~l~v~r 83 (106)
T 3ngh_A 75 NSVTLLVLD 83 (106)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEEE
Confidence 889999987
No 98
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.49 E-value=4.5e-13 Score=99.79 Aligned_cols=88 Identities=31% Similarity=0.513 Sum_probs=75.7
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC----CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~----~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
+++.+++.+.++ ..+|||+|.++.+. ....+++|..|.+||||+++| |++||.|++|||+.+.++++.+++..+
T Consensus 1 s~~~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 78 (97)
T 2w4f_A 1 SMEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEAL 78 (97)
T ss_dssp --CEEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 356788889877 58999999987642 135899999999999999999 999999999999999999999999888
Q ss_pred HhccCCCCcEEEEEEec
Q psy1022 109 REVVQKPGPIKLVVAKC 125 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r~ 125 (245)
+.. +..+.|+|.|.
T Consensus 79 ~~~---g~~v~l~v~R~ 92 (97)
T 2w4f_A 79 RGA---GTAVQMRVWRE 92 (97)
T ss_dssp HTS---CSEEEEEEECC
T ss_pred hCC---CCeEEEEEEeC
Confidence 876 78899999974
No 99
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.49 E-value=2.4e-13 Score=102.56 Aligned_cols=85 Identities=19% Similarity=0.290 Sum_probs=75.4
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....++|.|.++. .+|||.+.++.+ ..+++|..|.+||||+++| |++||.|++|||..+.++++++++.+|+..
T Consensus 4 ~~~~r~v~l~k~~-~g~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 77 (102)
T 2d90_A 4 GSSGRVVVIKKGS-NGYGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG- 77 (102)
T ss_dssp CSSSEEEEEECCS-SSSSCEEEECSS---SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS-
T ss_pred CCCCEEEEEeeCC-CCccEEEEeecC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3466889998865 689999998654 5799999999999999999 999999999999999999999999999986
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 78 --g~~v~l~v~r~ 88 (102)
T 2d90_A 78 --GDQTTLLVLDK 88 (102)
T ss_dssp --TTEEEEEECST
T ss_pred --CCEEEEEEEEC
Confidence 78899999863
No 100
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.49 E-value=3.1e-13 Score=104.60 Aligned_cols=87 Identities=30% Similarity=0.430 Sum_probs=76.2
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
.....+|.|.+....+|||++.++.+ ...+++|..|.+||||+++|+|++||+|++|||.++.+.++++++++|+..
T Consensus 22 ~~~~~~V~l~~~~~~~lG~~l~~~~~--~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~- 98 (114)
T 2gzv_A 22 SMVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV- 98 (114)
T ss_dssp CCCCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred cCCCEEEEEEECCCCcEeEEEEeCCC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34678899998887789999998754 246899999999999999999999999999999999999999999999987
Q ss_pred CCCCcEEEEEEe
Q psy1022 113 QKPGPIKLVVAK 124 (245)
Q Consensus 113 ~~~~~V~L~V~r 124 (245)
++.+.|+|.+
T Consensus 99 --~~~v~l~v~~ 108 (114)
T 2gzv_A 99 --KGEVTIHYNK 108 (114)
T ss_dssp --CSEEEEEEEC
T ss_pred --CCeEEEEEEe
Confidence 6678999875
No 101
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.49 E-value=2.5e-13 Score=104.64 Aligned_cols=88 Identities=17% Similarity=0.291 Sum_probs=79.2
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
...++.+++.|.++....|||.+..+.+ ..+++|..|.+||||+++| |++||+|++|||+.+.++++++++.+|+.
T Consensus 9 ~~~ldp~~~~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (114)
T 2edz_A 9 ASTFNPRECKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK 84 (114)
T ss_dssp CCCCCCEEEEEECCTTCCCSCEEECCTT---CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHH
T ss_pred hhcCCCEEEEEeCCCCCcccEEEEEecC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3455889999998888899999988654 6789999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. +..+.|+|.|.
T Consensus 85 ~---g~~v~l~v~R~ 96 (114)
T 2edz_A 85 S---GNSVTLLVLDG 96 (114)
T ss_dssp T---CSEEEEEEECH
T ss_pred C---CCEEEEEEEEC
Confidence 6 78899999873
No 102
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=5.8e-13 Score=100.15 Aligned_cols=89 Identities=28% Similarity=0.394 Sum_probs=77.6
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
.....+++|.|.+.....|||.+.+..+ ...+++|..|.++|||+++| |++||+|++|||..+.++++.+++..++.
T Consensus 6 ~~~~~~~~v~l~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 82 (100)
T 2eeh_A 6 SGSDIIHSVRVEKSPAGRLGFSVRGGSE--HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS 82 (100)
T ss_dssp SCCCEECCEEECCCSSSSCSEEEECCTT--TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS
T ss_pred CCCCeEEEEEEEECCCCCccEEEEcccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC
Confidence 3356788899988877779999998654 24799999999999999999 99999999999999999999999999986
Q ss_pred ccCCCCcEEEEEEecC
Q psy1022 111 VVQKPGPIKLVVAKCW 126 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~~ 126 (245)
+..+.|+|.|..
T Consensus 83 ----~~~v~l~v~R~g 94 (100)
T 2eeh_A 83 ----SSRLHMMVRRMG 94 (100)
T ss_dssp ----CSSEEEEEEECS
T ss_pred ----CCEEEEEEEECC
Confidence 578999999843
No 103
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.48 E-value=4.1e-13 Score=99.87 Aligned_cols=83 Identities=30% Similarity=0.518 Sum_probs=71.2
Q ss_pred eEEEEEEcCCCCcccEEEEcccCC------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
.++|.+.+++ +|||+|.++.+. ....+++|..|.++|||++ | |++||+|++|||+++.++++.+++..++
T Consensus 4 ~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 4 EIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEEECSS--SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEEECCCC--CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 3567776654 899999997631 2357999999999999999 7 9999999999999999999999999999
Q ss_pred hccCCCCcEEEEEEec
Q psy1022 110 EVVQKPGPIKLVVAKC 125 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~ 125 (245)
.. +..+.|+|.|.
T Consensus 80 ~~---~~~v~l~v~R~ 92 (95)
T 1mfg_A 80 TF---QNTVELIIVRE 92 (95)
T ss_dssp HC---CSEEEEEEEEE
T ss_pred cC---CCeEEEEEEeC
Confidence 76 78899999873
No 104
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.48 E-value=4.2e-13 Score=111.07 Aligned_cols=91 Identities=32% Similarity=0.502 Sum_probs=80.4
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCCC---CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNKG---GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~---~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
..++..+|+|.++. .+|||+|.++.+.. ...++||..|.+||||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 2 ~~~~~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (196)
T 3gsl_A 2 GSMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 80 (196)
T ss_dssp -CEEEEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcEEEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35788999998875 78999999987531 257999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEEecC
Q psy1022 109 REVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 109 r~~~~~~~~V~L~V~r~~ 126 (245)
+.. +..+.|+|.+..
T Consensus 81 ~~~---g~~v~l~v~r~~ 95 (196)
T 3gsl_A 81 KEA---GSIVRLYVMRRK 95 (196)
T ss_dssp HTS---CSEEEEEEEEEC
T ss_pred HhC---CCcEEEEEEecC
Confidence 987 788999998843
No 105
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.48 E-value=8e-14 Score=103.04 Aligned_cols=83 Identities=22% Similarity=0.331 Sum_probs=73.1
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|.|.++. .+|||++.+..+ ..+++|..|.+||||+++| |++||.|++|||+++.+++++++..+|+..
T Consensus 3 ~pr~v~l~k~~-~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 74 (91)
T 2vsp_A 3 KPKLCRLAKGE-NGYGFHLNAIRG---LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS--- 74 (91)
T ss_dssp CEEEEEEECBT-TBTSCCCBCCTT---CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS---
T ss_pred CcEEEEEEeCC-CcccEEEEeccC---CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 56789998876 489999988654 5789999999999999999 999999999999999999999999999986
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 75 g~~v~l~v~r~ 85 (91)
T 2vsp_A 75 GKNVTLLVCGK 85 (91)
T ss_dssp CSEEEEEEEC-
T ss_pred CCEEEEEEEeC
Confidence 78899999873
No 106
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.48 E-value=2.8e-13 Score=100.52 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=71.8
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|.|.++. .+|||.+.++.+ ..+++|..|.+||||+++| |++||+|++|||.++.+++|++++.+|+..
T Consensus 5 ~~r~v~l~~~~-~~~G~~l~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 76 (95)
T 3r68_A 5 QPRVVVIKKGS-NGYGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG--- 76 (95)
T ss_dssp CCEEEEEECBT-TBCSCEEEEC-----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred CcEEEEEecCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 45778887764 789999998653 4699999999999999999 999999999999999999999999999986
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
++.+.+++.+
T Consensus 77 ~~~~~~~~~r 86 (95)
T 3r68_A 77 GDQTTLLVLD 86 (95)
T ss_dssp TTEEEEEEEE
T ss_pred CCeEEEEEEC
Confidence 7788888876
No 107
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.48 E-value=2.3e-13 Score=102.78 Aligned_cols=86 Identities=29% Similarity=0.521 Sum_probs=74.8
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCC------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHH
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAV 105 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav 105 (245)
...+.++|.+.+++ +|||+|.++.+. ....+++|..|.++|||++ | |++||+|++|||+++.++++.+++
T Consensus 8 ~~~~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~ 83 (103)
T 1n7t_A 8 LAKQEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAV 83 (103)
T ss_dssp SSCCCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHH
T ss_pred cccEEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHH
Confidence 45677888888764 899999997531 1367999999999999999 7 999999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEEEe
Q psy1022 106 RVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 106 ~~Lr~~~~~~~~V~L~V~r 124 (245)
..++.. +..+.|+|.|
T Consensus 84 ~~~~~~---g~~v~l~v~R 99 (103)
T 1n7t_A 84 SLLKTF---QNTVELIIVR 99 (103)
T ss_dssp HHHHHC---CSEEEEEEEC
T ss_pred HHhhcC---CCeEEEEEEe
Confidence 999976 7889999987
No 108
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.48 E-value=4.7e-13 Score=104.02 Aligned_cols=86 Identities=20% Similarity=0.296 Sum_probs=71.0
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++++|.|.|+. .+|||+|.++ ..+.+|.+|.+ +++. +.|++||.|++|||+++.+++|+|++++|+++.
T Consensus 10 ~~~~~~V~L~Kg~-~G~GFsI~~~-----~~g~~V~~I~~--~~~~-aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 10 AGLLVTIPLIKGP-KGFGFAIADS-----PTGQKVKMILD--SQWC-QGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp HCEEEEEEEECBT-TBSSEEEEEE-----TTEEEEEEESC--GGGS-TTCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCCEEEEEEEECC-CcccEEEeCC-----CCCcEEEEecC--hHHh-CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3588999999885 7999999764 34678999998 3444 459999999999999999999999999999862
Q ss_pred CCCCcEEEEEEecCCC
Q psy1022 113 QKPGPIKLVVAKCWDP 128 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~~ 128 (245)
.+..|+|+|.|...+
T Consensus 81 -~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 81 -VGADVPLLILRGGPP 95 (113)
T ss_dssp -TTCEEEEEEEESSCC
T ss_pred -CCCEEEEEEEECCcc
Confidence 256899999995543
No 109
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.48 E-value=6.1e-13 Score=101.79 Aligned_cols=86 Identities=29% Similarity=0.479 Sum_probs=76.3
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
++++|.|.++...+|||.+.+..+ ..+++|..|.+||||+++|.|++||.|++|||..+.+++++++..+|+.. .
T Consensus 1 n~~~v~l~~~~~~glG~~~~~~~~---~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 75 (112)
T 1qau_A 1 NVISVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI--A 75 (112)
T ss_dssp CEEEEEEECBTTTBTSEEEEECSS---SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHS--C
T ss_pred CEEEEEEEcCCCCceeEEEEecCC---CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 468899988878899999998653 57999999999999999995599999999999999999999999999875 2
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 76 g~~v~l~v~R~ 86 (112)
T 1qau_A 76 SETHVVLILRG 86 (112)
T ss_dssp SSSEEEEEEEC
T ss_pred CCcEEEEEEeC
Confidence 57899999984
No 110
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.47 E-value=6.9e-13 Score=98.40 Aligned_cols=88 Identities=36% Similarity=0.524 Sum_probs=75.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
.+.++|.|.++ ..+|||++.++.+. ....+++|..|.+||+|+++|+|++||+|++|||+.+.++++.+++.+++..
T Consensus 3 ~~~~~v~l~~~-~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 3 SETFDVELTKN-VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEEECB-TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEecC-CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 57788888655 57899999986431 1257999999999999999999999999999999999999999999999886
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 82 ---~~~v~l~v~r~ 92 (97)
T 2iwn_A 82 ---GQTVLLTLMRR 92 (97)
T ss_dssp ---CSEEEEEEEEE
T ss_pred ---CCeEEEEEEeC
Confidence 78899999873
No 111
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.47 E-value=3.9e-13 Score=105.47 Aligned_cols=88 Identities=26% Similarity=0.507 Sum_probs=76.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVR 106 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~ 106 (245)
++..+|.+.++...+|||++.++... ....+++|..|.+||||+++|+|++||+|++|||+++.+++++++++
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35578888888778899999875431 12368999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEEEe
Q psy1022 107 VLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 107 ~Lr~~~~~~~~V~L~V~r 124 (245)
+|+.. ++.+.|+|.+
T Consensus 103 ~l~~~---~~~v~l~v~r 117 (123)
T 2iwq_A 103 AIRKA---GNPVVFMVQS 117 (123)
T ss_dssp HHHHC---CSSEEEEEEC
T ss_pred HHHcC---CCeEEEEEEE
Confidence 99987 6789999987
No 112
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.47 E-value=4.6e-13 Score=103.69 Aligned_cols=86 Identities=26% Similarity=0.495 Sum_probs=77.0
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.++|.|.+.. .+|||++.++.+ ..+++|..|.+||||+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 12 ~~~~~~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 86 (119)
T 1tp5_A 12 PREPRRIVIHRGS-TGLGFNIVGGED---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA- 86 (119)
T ss_dssp CCSCEEEEEECTT-SCCCEEEEECGG---GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS-
T ss_pred CCccEEEEEEECC-CCccEEEecCCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4577899998876 679999998654 47999999999999999999999999999999999999999999999887
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 87 --~~~v~l~v~r~ 97 (119)
T 1tp5_A 87 --GQTVTIIAQYK 97 (119)
T ss_dssp --CSEEEEEEEEC
T ss_pred --CCeEEEEEEEC
Confidence 78899999873
No 113
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.47 E-value=2.2e-13 Score=99.07 Aligned_cols=81 Identities=20% Similarity=0.335 Sum_probs=70.2
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
.++|.|. + ..+|||++.++.+ ...+++|..|.+||||+++| |++||+|++|||..+.++++.+++.+++.. +
T Consensus 2 ~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~ 73 (85)
T 1rgw_A 2 AYSVTLT-G-PGPWGFRLQGGKD--FNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSA---S 73 (85)
T ss_dssp EEEEEEC-C-SSCCCEEECCCGG--GTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTC---S
T ss_pred cEEEEEe-C-CCccCEEEEeccC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcC---C
Confidence 3567773 3 3789999998765 25689999999999999998 999999999999999999999999999876 6
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
..+.|+|.|
T Consensus 74 ~~v~l~v~R 82 (85)
T 1rgw_A 74 YNLSLTLQK 82 (85)
T ss_dssp SCEEEEEES
T ss_pred CeEEEEEEe
Confidence 679999986
No 114
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=103.05 Aligned_cols=85 Identities=20% Similarity=0.280 Sum_probs=75.3
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....++|.|.++ ..+|||.+.+... ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 6 ~~~~r~v~l~k~-~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 79 (106)
T 2eei_A 6 SGQPRLCYLVKE-GGSYGFSLKTVQG---KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS- 79 (106)
T ss_dssp CSSSEEEEEECC-SSSCSCCEECCSS---CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH-
T ss_pred CCCCEEEEEEEC-CCCCCEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 346688999885 5889999988653 6789999999999999999 999999999999999999999999999887
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 80 --~~~v~l~v~r~ 90 (106)
T 2eei_A 80 --GSRVMFLLVDK 90 (106)
T ss_dssp --CSEEEEEECCT
T ss_pred --CCeEEEEEEcC
Confidence 77899999863
No 115
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.47 E-value=2.5e-13 Score=102.87 Aligned_cols=85 Identities=14% Similarity=0.245 Sum_probs=72.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCC-----CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNK-----GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~-----~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
+...+|.|.+....+|||.|.+.... ....+++|..|.++|||+++| |++||+|++|||+.+.++++++++++|
T Consensus 14 ~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l 92 (104)
T 2z17_A 14 SQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLI 92 (104)
T ss_dssp SCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHH
T ss_pred CcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 45567778887778899999983210 235799999999999999999 999999999999999999999999999
Q ss_pred HhccCCCCcEEEEE
Q psy1022 109 REVVQKPGPIKLVV 122 (245)
Q Consensus 109 r~~~~~~~~V~L~V 122 (245)
+.. ++.|+|+|
T Consensus 93 ~~~---~~~v~l~v 103 (104)
T 2z17_A 93 RSS---GNLLTIET 103 (104)
T ss_dssp HHT---TTEEEEEC
T ss_pred HhC---CCcEEEEE
Confidence 987 56777765
No 116
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.46 E-value=1.6e-12 Score=101.37 Aligned_cols=99 Identities=29% Similarity=0.500 Sum_probs=79.6
Q ss_pred CCCCCCCCCCCCCceeeEEEEEEcCCCCcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeeccc
Q psy1022 20 RTSSFSSITDSSMSLNIITVTLNMDTVNFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFEN 98 (245)
Q Consensus 20 ~~ss~ss~~~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~ 98 (245)
+.++|-+.. .++.+.|.+.+. ..+|||.|.++.+. .+..+++|..|.+||||+++|+|++||+|++|||+++.+
T Consensus 19 ~~~~y~~~~----~~~~~~v~l~~~-~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~ 93 (121)
T 2kom_A 19 FQGSYNTKK----IGKRLNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVG 93 (121)
T ss_dssp --CCCCCCC----SCEEEEEEEECC-TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTT
T ss_pred ccccccCcc----CCeEEEEEEEcC-CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCC
Confidence 344555544 467888888765 47899999986532 123789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 99 MSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 99 ~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
+++++++++|+... .+..|.|+|.|
T Consensus 94 ~~~~~~~~~l~~~~-~g~~v~l~v~R 118 (121)
T 2kom_A 94 KSQEEVVSLLRSTK-MEGTVSLLVFR 118 (121)
T ss_dssp SCHHHHHHHHHHCC-SSCEEEEEEEE
T ss_pred CCHHHHHHHHhcCC-CCCEEEEEEEe
Confidence 99999999999751 15679999987
No 117
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.46 E-value=8.5e-13 Score=98.04 Aligned_cols=81 Identities=27% Similarity=0.374 Sum_probs=71.4
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....++|.|.++. .+|||.+.+ +.+++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 6 ~~~~r~v~l~~~~-~~~G~~l~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-- 75 (93)
T 2dls_A 6 SGVQRCVIIQKDQ-HGFGFTVSG------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS-- 75 (93)
T ss_dssp CCCEEEEEEECSS-SSCCEEEEC------SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS--
T ss_pred CCCCEEEEEEeCC-CceeEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC--
Confidence 3466788888765 789999986 4689999999999999999 99999999999999999999999988873
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 76 --g~~v~l~v~R~ 86 (93)
T 2dls_A 76 --GAYVALTLLGS 86 (93)
T ss_dssp --SSEEEEEEECC
T ss_pred --CCEEEEEEEEC
Confidence 78899999984
No 118
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.46 E-value=5.9e-13 Score=97.62 Aligned_cols=84 Identities=26% Similarity=0.445 Sum_probs=70.0
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.++|.|.++. .+|||++.+..+ ..+++|..+ ++|||+ .| |++||.|++|||..+.++++++++.+|+...
T Consensus 2 ~~~~~v~l~k~~-~g~G~~~~~~~~---~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~- 73 (88)
T 3bpu_A 2 MELITVHIVKGP-MGFGFTIADSPG---GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESP- 73 (88)
T ss_dssp EEEEEEEEECBT-TBSSCEEEECTT---SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSC-
T ss_pred CcEEEEEEEcCC-CceeEEEEecCC---CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC-
Confidence 478999999876 789999998653 578999987 999999 77 9999999999999999999999999998631
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
.+..+.|+|.|.
T Consensus 74 ~g~~v~l~v~R~ 85 (88)
T 3bpu_A 74 KGSEVTLLVQRQ 85 (88)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCEEEEEEEeC
Confidence 157899999873
No 119
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=2.9e-13 Score=102.02 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=70.2
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
++.++|.+ ....+|||++.++.+ ...+++|..|.++|||+++|.|++||+|++|||+.+.++ +.+++.+++..
T Consensus 10 ~~~~~v~~--~~~~~~G~~~~gg~~--~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~-- 82 (100)
T 2edp_A 10 FQYVPVQL--QGGAPWGFTLKGGLE--HCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGS-- 82 (100)
T ss_dssp CEEEEEEC--CSCSCCCCCEEEEGG--GTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTC--
T ss_pred cEEEEEEE--CCCCCcCEEEeccCC--CCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhC--
Confidence 44455544 444689999999765 246799999999999999944999999999999999997 89999999986
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 83 -~~~v~l~v~R~ 93 (100)
T 2edp_A 83 -FRILKLIVRRR 93 (100)
T ss_dssp -CSSCEEEEEEC
T ss_pred -CCeEEEEEEeC
Confidence 67899999984
No 120
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.45 E-value=8.3e-13 Score=101.65 Aligned_cols=86 Identities=34% Similarity=0.551 Sum_probs=74.8
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.+.|.|.++. .+|||.|.++.+. ...+++|..|.+||+|+++|+|++||+|++|||+.+.++++.+++.+|+..
T Consensus 17 ~~~~v~l~~~~-~glG~~l~~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~--- 91 (116)
T 2dm8_A 17 QEMIIEISKGR-SGLGLSIVGGKDT-PLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT--- 91 (116)
T ss_dssp SCEEEEEECCS-SCCCCCCBCCTTS-SCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC---
T ss_pred CEEEEEEEECC-CcccEEEeCCCCC-CcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 45778887664 7899999987541 126999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..|.|+|.|.
T Consensus 92 ~~~v~l~v~R~ 102 (116)
T 2dm8_A 92 PQKVRLVVYRD 102 (116)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 67899999874
No 121
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.45 E-value=1.3e-13 Score=100.12 Aligned_cols=79 Identities=24% Similarity=0.517 Sum_probs=70.7
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.++|.|.++. .+|||.+.+ ..+++|..|.+||||+++| |++||+|++|||+++.++++++++.+|+..
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~------~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 70 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSG------QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC--- 70 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCC------SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC---
T ss_pred CcEEEEEEeCC-CcccEEEEc------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 46789998776 789999876 3579999999999999999 999999999999999999999999999876
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
+..++|+|.|
T Consensus 71 ~~~v~l~v~R 80 (83)
T 2kv8_A 71 SGVLHMVIAE 80 (83)
T ss_dssp SSCEEEEEEC
T ss_pred CCeEEEEEEc
Confidence 5679999987
No 122
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=6.1e-13 Score=98.92 Aligned_cols=84 Identities=24% Similarity=0.293 Sum_probs=72.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
...++|.|. . ..+|||.+.++.+ ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 7 ~~~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 79 (94)
T 2eeg_A 7 GMPHSVTLR-G-PSPWGFRLVGGRD--FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC-- 79 (94)
T ss_dssp CCCEEEEEC-C-SSCCSCCEECCTT--TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC--
T ss_pred CceEEEEEe-C-CCccCEEEECccC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 355777774 3 3689999999875 35789999999999999999 999999999999999999999999999886
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 80 -g~~v~l~v~R~ 90 (94)
T 2eeg_A 80 -HDHLTLSVSSG 90 (94)
T ss_dssp -CSCEEEEEECC
T ss_pred -CCeEEEEEEeC
Confidence 67899999873
No 123
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=5.6e-13 Score=100.43 Aligned_cols=84 Identities=23% Similarity=0.338 Sum_probs=73.6
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
...++.+.+.|.+.. .+|||.+.+ ..+++|..|.+++||+++| |++||+|++|||+.+.++++++++.+|+.
T Consensus 11 ~~~~~~~~v~l~~~~-~g~G~~~~~------~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 82 (100)
T 1whd_A 11 PENGEKLQITIRRGK-DGFGFTICC------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS 82 (100)
T ss_dssp CCCCEEEEEEEECCS-SSSSCBCCC------SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred ccccceEEEEEECCC-CeeeEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345678888887664 789999876 4679999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEec
Q psy1022 111 VVQKPGPIKLVVAKC 125 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~ 125 (245)
. ++.|.|+|.|.
T Consensus 83 ~---~~~v~l~v~R~ 94 (100)
T 1whd_A 83 C---PSEIILLVWRV 94 (100)
T ss_dssp C---SSEEEEEEEEC
T ss_pred C---CCeEEEEEEEC
Confidence 6 66799999884
No 124
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.43 E-value=1.2e-12 Score=96.61 Aligned_cols=83 Identities=22% Similarity=0.315 Sum_probs=71.9
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
..++|.+.. ..+|||++.++.+ ...+++|..|.++|||+++| |++||.|++|||.++.++++.+++.+|+..
T Consensus 3 ~~~~v~~~~--~~~~G~~l~~~~~--~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 74 (91)
T 2pkt_A 3 TTQQIDLQG--PGPWGFRLVGGKD--FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC--- 74 (91)
T ss_dssp EEEEEEEES--SSCCSEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---
T ss_pred ccEEEEECC--CCCCCEEEEccCC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 345566643 4689999998764 24689999999999999999 999999999999999999999999999985
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 75 g~~v~l~v~R~ 85 (91)
T 2pkt_A 75 TDNLTLTVARS 85 (91)
T ss_dssp SSEEEEEEEEE
T ss_pred CCeEEEEEEEC
Confidence 78899999984
No 125
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3.3e-13 Score=101.03 Aligned_cols=84 Identities=30% Similarity=0.406 Sum_probs=72.7
Q ss_pred eeeEEEEEEcCCCC-cccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 34 LNIITVTLNMDTVN-FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 34 ~~i~~V~L~k~~~~-~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
...++|.|.+++.. +|||.+.+ ..+++|..|.+||||+ .| |++||+|++|||.++.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~- 77 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREA- 77 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHC-
T ss_pred CccEEEEEEECCCCCcccEEEec------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 35678899877644 79999987 5689999999999995 55 999999999999999999999999999986
Q ss_pred CCCCcEEEEEEecCCC
Q psy1022 113 QKPGPIKLVVAKCWDP 128 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~~ 128 (245)
+..|.|+|.|....
T Consensus 78 --g~~v~l~v~R~~~~ 91 (96)
T 2edv_A 78 --EDSLSITVVRCTSS 91 (96)
T ss_dssp --SSCEEEEEEECCCC
T ss_pred --CCeEEEEEEECCCC
Confidence 78899999985533
No 126
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.42 E-value=3e-13 Score=100.61 Aligned_cols=81 Identities=25% Similarity=0.419 Sum_probs=70.8
Q ss_pred EEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcE
Q psy1022 39 VTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPI 118 (245)
Q Consensus 39 V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V 118 (245)
+.+.+....+|||++.++.+ ...+++|..|.++|||+++| |++||.|++|||..+.++++++++.+|+.. ...+
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v 81 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRD--FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQS---ASPL 81 (94)
T ss_dssp EEEEECSSSCCSBCCEEETT--TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC---CSSE
T ss_pred EEEEecCCCCccEEEecccC--CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCcE
Confidence 44444556789999998764 35689999999999999999 999999999999999999999999999987 5789
Q ss_pred EEEEEec
Q psy1022 119 KLVVAKC 125 (245)
Q Consensus 119 ~L~V~r~ 125 (245)
.|+|.|.
T Consensus 82 ~l~v~R~ 88 (94)
T 1vb7_A 82 RLQLDRS 88 (94)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9999984
No 127
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.42 E-value=6.9e-13 Score=111.26 Aligned_cols=86 Identities=22% Similarity=0.419 Sum_probs=77.4
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+++.|.|.+.+..+|||++.++.+ ...+++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+.
T Consensus 82 ~~~~~~v~l~k~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-- 156 (192)
T 3k1r_A 82 SRKLKEVRLDRLHPEGLGLSVRGGLE--FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-- 156 (192)
T ss_dssp CSSCEEEEEETTSTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS--
T ss_pred CCceEEEEEEeCCCCceeEEEEcccc--cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC--
Confidence 34678899998877899999998764 35789999999999999999 99999999999999999999999999986
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..|.|+|.+.
T Consensus 157 --~~~v~l~v~r~ 167 (192)
T 3k1r_A 157 --EKTVSIKVRHI 167 (192)
T ss_dssp --SSEEEEEEEEC
T ss_pred --CCeEEEEEEEC
Confidence 57899999984
No 128
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.42 E-value=2e-12 Score=97.31 Aligned_cols=86 Identities=20% Similarity=0.357 Sum_probs=70.6
Q ss_pred CceeeEEEEEEcCCC--CcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 32 MSLNIITVTLNMDTV--NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~--~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
|..+.+.|.|.|... .+|||++.+... .+..+++|..|.+||||+++| |++||+|++|||+++.+++++++..+++
T Consensus 3 ~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~-~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~ 80 (94)
T 3kzd_A 3 MGKVTHSIHIEKSDTAADTYGFSLSSVEE-DGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLS 80 (94)
T ss_dssp -CCEEEEEEEEC------CCSEEEEEECS-SSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHH
T ss_pred cccceeEEEEEeCCCCcCCcCEEEEecCC-CCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 567889999998763 479999988543 134689999999999999999 9999999999999999999999999997
Q ss_pred hccCCCCcEEEEEEe
Q psy1022 110 EVVQKPGPIKLVVAK 124 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r 124 (245)
+ ..++|+|..
T Consensus 81 ~-----~~l~ltV~~ 90 (94)
T 3kzd_A 81 Q-----PSLGLLVRT 90 (94)
T ss_dssp S-----SEEEEEEEE
T ss_pred C-----CeEEEEEEe
Confidence 4 468888874
No 129
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.41 E-value=5.4e-13 Score=100.82 Aligned_cols=84 Identities=18% Similarity=0.322 Sum_probs=73.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
-+.++|.|. + ..+|||+|.++.+ ...+++|..|.++|||+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 4 g~~~~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~-- 76 (103)
T 1wf7_A 4 GSSGSVSLV-G-PAPWGFRLQGGKD--FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC-- 76 (103)
T ss_dssp CCCEEEEEE-S-SSCCSCCEEEETT--TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC--
T ss_pred CCEEEEEEe-C-CCccCEEEecccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356788886 3 4789999999875 35679999999999999999 999999999999999999999999999887
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 77 -g~~v~l~v~R~ 87 (103)
T 1wf7_A 77 -TGSLNMTLQRA 87 (103)
T ss_dssp -SSEEEEEECCC
T ss_pred -CCeEEEEEEeC
Confidence 67899999873
No 130
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.40 E-value=2.1e-12 Score=99.22 Aligned_cols=86 Identities=27% Similarity=0.402 Sum_probs=74.3
Q ss_pred CceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 32 MSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 32 ~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
.+...++|.+.+....+|||.|.++.+ ...+++|..|.++++|+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 12 ~~~~~~~v~~~~~~~~~lG~~l~~~~~--~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 12 RENKEKKVFISLVGSRGLGCSISSGPI--QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp CCCSSEEEEECCCSSCCCCEEEEECCS--SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred CCCCcEEEEEEEcCCCceeEEEeecCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 344557788877777899999998754 35789999999999999999 999999999999999999998999999864
Q ss_pred cCCCCcEEEEEEe
Q psy1022 112 VQKPGPIKLVVAK 124 (245)
Q Consensus 112 ~~~~~~V~L~V~r 124 (245)
..+.|+|.+
T Consensus 89 ----~~v~l~v~r 97 (114)
T 1x5n_A 89 ----RSLTISIVA 97 (114)
T ss_dssp ----SSEEEEECS
T ss_pred ----CeEEEEEEc
Confidence 579999976
No 131
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.40 E-value=2.4e-12 Score=97.08 Aligned_cols=76 Identities=32% Similarity=0.543 Sum_probs=65.7
Q ss_pred CCcccEEEEcccCC----------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 46 VNFLGISIVGQSNK----------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 46 ~~~LG~sI~gg~~~----------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
..+|||++.|+.+. ....+++|..|.++|||+++| |++||.|++|||..+.++++++++..|+.. .+
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~g 94 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKR--SE 94 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCT--TC
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CC
Confidence 34799999976542 235789999999999999999 999999999999999999999999999864 25
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
..+.|+|.|
T Consensus 95 ~~v~l~v~R 103 (104)
T 3sfj_A 95 EVVRLLVTR 103 (104)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEEEc
Confidence 689999876
No 132
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.40 E-value=2.4e-12 Score=96.13 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=70.5
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
....+.|.++. .+|||.+.++.+ ..+++|..|.++|||+++| |++||+|++|||+.+.+++++++.++|+.. .
T Consensus 9 ~~~~~~l~~~~-~g~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 81 (98)
T 2jxo_A 9 RPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--G 81 (98)
T ss_dssp CCEEEEEECTT-TCCCEEEECCCS---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT--T
T ss_pred CcEEEEEEeCC-CcccEEEEecCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 45667887764 789999998654 5699999999999999999 999999999999999999999999999987 2
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
+..+.|+|.|
T Consensus 82 ~~~~~l~v~R 91 (98)
T 2jxo_A 82 DETKLLVVDR 91 (98)
T ss_dssp TEEEEEECCH
T ss_pred CcEEEEEEEC
Confidence 3445677765
No 133
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.40 E-value=4.5e-12 Score=106.33 Aligned_cols=87 Identities=20% Similarity=0.293 Sum_probs=76.3
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeeccc--CCHHHHHHHHHhcc
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFEN--MSNDEAVRVLREVV 112 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~--~t~~eav~~Lr~~~ 112 (245)
+.++|.|.++ ..+|||+|.++.+.....+++|..|.+||+|+++|+|++||+|++|||+++.+ +++.+++.+++..
T Consensus 18 ~~~~v~~~~~-~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~- 95 (206)
T 3r0h_A 18 KKILIELKVE-KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT- 95 (206)
T ss_dssp SCEEEEEECT-TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC-
T ss_pred CEEEEEEEeC-CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc-
Confidence 5677888776 48899999998763223589999999999999999999999999999999999 9999999999987
Q ss_pred CCCCc-EEEEEEec
Q psy1022 113 QKPGP-IKLVVAKC 125 (245)
Q Consensus 113 ~~~~~-V~L~V~r~ 125 (245)
++. +.|+|.|.
T Consensus 96 --~~~~v~l~v~R~ 107 (206)
T 3r0h_A 96 --YEKAVTLTVFRA 107 (206)
T ss_dssp --CSSEEEEEEECC
T ss_pred --CCCceEEEEEec
Confidence 666 99999874
No 134
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.10 E-value=2.5e-14 Score=110.60 Aligned_cols=90 Identities=30% Similarity=0.387 Sum_probs=76.6
Q ss_pred CCCCceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHH
Q psy1022 29 DSSMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVL 108 (245)
Q Consensus 29 ~s~~~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~L 108 (245)
+..+...+++|.|.+....+|||++.++.+ ...+++|..|.+||||++++.|++||+|++|||.++.++++++++.+|
T Consensus 21 e~~~~~~~~~v~l~k~~~~glG~~l~~g~~--~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l 98 (112)
T 2lob_A 21 ENLYFQGIRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 98 (112)
Confidence 344456788999998888899999999765 246899999999999999434999999999999999999999999999
Q ss_pred HhccCCCCcEEEEEE
Q psy1022 109 REVVQKPGPIKLVVA 123 (245)
Q Consensus 109 r~~~~~~~~V~L~V~ 123 (245)
+.. ++.++|+|.
T Consensus 99 ~~~---~~~v~l~V~ 110 (112)
T 2lob_A 99 SQQ---RGEIEFEVV 110 (112)
Confidence 876 566888775
No 135
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.3e-12 Score=98.22 Aligned_cols=85 Identities=32% Similarity=0.440 Sum_probs=71.6
Q ss_pred eeeEEEEEEcC-CCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 34 LNIITVTLNMD-TVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 34 ~~i~~V~L~k~-~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
.+.++|.|.+. ...+|||.|.++.+ ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-- 81 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSE--HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG-- 81 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTT--TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS--
T ss_pred CccEEEEEEECCCCCcccEEEeCCCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC--
Confidence 36677888763 46789999998754 35789999999999999999 99999999999999999999888887765
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
...+.|+|.|.
T Consensus 82 --~~~v~l~v~R~ 92 (101)
T 1uez_A 82 --SKKLVLSVYSA 92 (101)
T ss_dssp --SSSCCEEECCC
T ss_pred --CCeEEEEEEEC
Confidence 45788999763
No 136
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.38 E-value=2.7e-12 Score=98.89 Aligned_cols=81 Identities=15% Similarity=0.268 Sum_probs=70.7
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
..++|.|.+++ .+|||.+.+ ..+++|..|.+||||+++| |++||.|++|||.++.++++++++++|+..
T Consensus 23 ~~r~v~l~k~~-~~~G~~l~~------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~--- 91 (109)
T 2vsv_A 23 MPRSIRFTAEE-GDLGFTLRG------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF--- 91 (109)
T ss_dssp SCEEEEECCGG-GCCCEEEES------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred CCEEEEEEeCC-CceeEEEeC------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 45788898764 789999976 5678999999999999999 999999999999999999999999999886
Q ss_pred CC-cEEEEEEecC
Q psy1022 115 PG-PIKLVVAKCW 126 (245)
Q Consensus 115 ~~-~V~L~V~r~~ 126 (245)
++ .|+|+|.+..
T Consensus 92 ~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 92 GEDEIEMKVVSLL 104 (109)
T ss_dssp TTSCEEEEEESCC
T ss_pred CCCeEEEEEEECC
Confidence 44 4999998743
No 137
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=2.4e-12 Score=101.79 Aligned_cols=84 Identities=19% Similarity=0.368 Sum_probs=73.5
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
..+++.|.++ ..+|||++.+. ..+++|..|.+||||+++|+|++||.|++|||..+.+.++++++++|+... .
T Consensus 27 ~~~~~~l~k~-~~glG~~i~~~-----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~-~ 99 (126)
T 1wif_A 27 KVIQTKLTVG-NLGLGLVVIQN-----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT-I 99 (126)
T ss_dssp CEEEEEEECC-TTCCCCCEEEE-----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC-S
T ss_pred ceEEEEEecC-CceEeEEEEcC-----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-C
Confidence 5678888765 47899999873 568999999999999999999999999999999999999999999999742 2
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..|+|+|.|.
T Consensus 100 G~~v~l~V~R~ 110 (126)
T 1wif_A 100 GTVLQIKAYRG 110 (126)
T ss_dssp SCEEEEEEESS
T ss_pred CCEEEEEEEEC
Confidence 67899999984
No 138
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=8.9e-12 Score=93.34 Aligned_cols=85 Identities=22% Similarity=0.375 Sum_probs=70.5
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.++|.|.+.. .+|||.|.+. ..+++|..|.++ |+..| |++||+|++|||+++.+++|++++++|+...
T Consensus 8 ~~~~~~v~l~~~~-~g~G~~i~~~-----~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 8 QAELMTLTIVKGA-QGFGFTIADS-----PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp CCCCEEEEEECCS-SSSSEEEEEE-----TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CceEEEEEEEeCC-CceeEEEEcC-----CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4677889998765 8899999753 347999999994 56666 9999999999999999999999999999851
Q ss_pred CCCCcEEEEEEecCC
Q psy1022 113 QKPGPIKLVVAKCWD 127 (245)
Q Consensus 113 ~~~~~V~L~V~r~~~ 127 (245)
.+..|.|+|.|...
T Consensus 79 -~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 79 -IGSETSLIIHRGSG 92 (96)
T ss_dssp -TTSEEEEEEECCSS
T ss_pred -CCCEEEEEEEECCC
Confidence 15789999998543
No 139
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.36 E-value=4.7e-12 Score=94.76 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=69.1
Q ss_pred EEEEEcCCCCcccEEEEcccCCCCC-----CCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 38 TVTLNMDTVNFLGISIVGQSNKGGD-----GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 38 ~V~L~k~~~~~LG~sI~gg~~~~~~-----~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
+|.|.+. ..+|||++.++....+. .+++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+..
T Consensus 5 ~v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 81 (99)
T 3khf_A 5 PIVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS- 81 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS-
T ss_pred CEEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 4666554 58899999975431112 267899999999999999 999999999999999999999999999976
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 82 --g~~v~l~v~r~ 92 (99)
T 3khf_A 82 --GNKISLRTTAL 92 (99)
T ss_dssp --CSEEEEEEECS
T ss_pred --CCEEEEEEEEC
Confidence 78899999873
No 140
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.36 E-value=1.8e-12 Score=101.56 Aligned_cols=88 Identities=28% Similarity=0.460 Sum_probs=77.1
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++++|.|.++...+|||.+.+..+ ..+++|..|.+||+|+++|.|++||.|++|||+.+.+++++++.++|+..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~---~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 81 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI- 81 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTT---SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC-
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 34678899998877899999998643 57999999999999999995599999999999999999999999999875
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
.+..+.|+|.|.
T Consensus 82 -~g~~v~l~v~R~ 93 (127)
T 1b8q_A 82 -ASETHVVLILRG 93 (127)
T ss_dssp -CSSCEEEEEECC
T ss_pred -CCCeEEEEEEeC
Confidence 257899999973
No 141
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.36 E-value=3.8e-12 Score=126.28 Aligned_cols=92 Identities=32% Similarity=0.520 Sum_probs=81.8
Q ss_pred CCceeeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHH
Q psy1022 31 SMSLNIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRV 107 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~ 107 (245)
...++.++|.|.++. .+|||+|.||.+. ..+.+++|..|.+||||+++|+|++||+|++|||+++.+++|.+++.+
T Consensus 55 ~~~~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 133 (721)
T 2xkx_A 55 EGEMEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEA 133 (721)
T ss_pred CCCceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456788999999887 6999999998763 236899999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcEEEEEEecC
Q psy1022 108 LREVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 108 Lr~~~~~~~~V~L~V~r~~ 126 (245)
|+.+ +..|+|+|.|..
T Consensus 134 l~~~---g~~v~l~v~R~~ 149 (721)
T 2xkx_A 134 LKEA---GSIVRLYVMRRK 149 (721)
T ss_pred hhcc---ccccceEEEecc
Confidence 9987 778999998753
No 142
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.36 E-value=6.9e-12 Score=105.06 Aligned_cols=87 Identities=28% Similarity=0.403 Sum_probs=77.3
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
..+.|.|.++...+|||+|.++.+ ...+++|..|.+||||+++|.|++||+|++|||+.+.+++|.+++.+++..
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~--- 81 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGID--KDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV--- 81 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTT--SSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC---
T ss_pred CCEEEEEEeCCCCCCCEEEecccC--CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---
Confidence 567888988888999999999765 257899999999999999945999999999999999999999999999887
Q ss_pred CCcEEEEEEecC
Q psy1022 115 PGPIKLVVAKCW 126 (245)
Q Consensus 115 ~~~V~L~V~r~~ 126 (245)
+..|.|+|.|..
T Consensus 82 g~~v~l~v~R~~ 93 (200)
T 2qt5_A 82 GERVVLEVEYEL 93 (200)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEeccC
Confidence 778999998853
No 143
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.34 E-value=8.5e-12 Score=97.56 Aligned_cols=85 Identities=19% Similarity=0.285 Sum_probs=73.6
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....++|.|.++. .+|||.+.++.+ ..+++|..|.++|+|+++| |++||.|++|||..+.+++++++..+|+..
T Consensus 7 ~~~~r~v~l~~~~-~g~G~~l~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 80 (128)
T 2kjd_A 7 MLRPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG- 80 (128)
T ss_dssp TCCCEEEEEECCS-SSCCEEEEECSS---SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred CCCcEEEEEecCC-CcccEEEEecCC---CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 4567788888775 789999998654 5699999999999999999 999999999999999999999999999986
Q ss_pred CCCCcEEEEEEe
Q psy1022 113 QKPGPIKLVVAK 124 (245)
Q Consensus 113 ~~~~~V~L~V~r 124 (245)
.+..+.|+|.|
T Consensus 81 -~~~~~~l~v~R 91 (128)
T 2kjd_A 81 -GDETKLLVVDR 91 (128)
T ss_dssp -CSEEEEEEECH
T ss_pred -CCCEEEEEEEe
Confidence 24457788876
No 144
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.34 E-value=8.8e-12 Score=104.32 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=80.3
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHh
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLRE 110 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~ 110 (245)
..+.++|.|.++...+|||++.++.+. ....+++|..|.+||||+++|+|++||.|++|||..+.+++++++..+|+.
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 357889999999889999999997542 135789999999999999999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEEEecC
Q psy1022 111 VVQKPGPIKLVVAKCW 126 (245)
Q Consensus 111 ~~~~~~~V~L~V~r~~ 126 (245)
.. .+..++|+|.|..
T Consensus 84 ~~-~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 84 SS-ITSKVTLEIEFDV 98 (196)
T ss_dssp CC-SSSEEEEEEEECS
T ss_pred CC-CCCeEEEEEEecC
Confidence 62 1457999998844
No 145
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.34 E-value=9.2e-12 Score=102.93 Aligned_cols=87 Identities=37% Similarity=0.586 Sum_probs=74.8
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCC---CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNK---GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
..++|.+.+.. .+|||.+.++... ....+++|..|.+||+|+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 100 ~~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 100 KVMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred ccEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 45667777665 5899999986542 2246899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 179 ---~~~v~l~v~R~ 189 (196)
T 3gsl_A 179 ---YDVVYLKVAKP 189 (196)
T ss_dssp ---CEEEEEEEEEE
T ss_pred ---CCeEEEEEeCC
Confidence 78899999984
No 146
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.33 E-value=6.8e-12 Score=105.21 Aligned_cols=84 Identities=19% Similarity=0.351 Sum_probs=74.1
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
...+++.+.+....+|||.+.+. ..+++|.+|.+||+|+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 112 ~~~~~v~l~~~~~~~lG~~~~~~-----~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-- 184 (206)
T 3r0h_A 112 LEKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-- 184 (206)
T ss_dssp EEEEEEEEECCTTCCCCEEEEEC-----SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC--
T ss_pred CcEEEEEEecCCCCccCeEEEcC-----CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 34566777776667899999863 57899999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
++.+.|+|.|.
T Consensus 185 -~~~v~L~V~R~ 195 (206)
T 3r0h_A 185 -NGKVSMEVTRP 195 (206)
T ss_dssp -CSEEEEEEEEE
T ss_pred -CCeEEEEEEeC
Confidence 78899999983
No 147
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.4e-11 Score=95.60 Aligned_cols=85 Identities=19% Similarity=0.334 Sum_probs=72.5
Q ss_pred eeeEEEEEEcCCCC--cccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 34 LNIITVTLNMDTVN--FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 34 ~~i~~V~L~k~~~~--~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
.+++.|.|.+.... +|||+|.+.... +..+++|..|.++|||+++| |++||+|++|||..+.++++++++.+|+.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~-~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED-GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET-TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC-CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 47889999987753 799999875431 12589999999999999999 99999999999999999999999999974
Q ss_pred cCCCCcEEEEEEec
Q psy1022 112 VQKPGPIKLVVAKC 125 (245)
Q Consensus 112 ~~~~~~V~L~V~r~ 125 (245)
..+.|+|.|.
T Consensus 91 ----~~v~l~v~R~ 100 (114)
T 2d8i_A 91 ----PSLGLLVRTY 100 (114)
T ss_dssp ----SEEEEEEEEC
T ss_pred ----CcEEEEEEEC
Confidence 3799999884
No 148
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=4.8e-11 Score=93.54 Aligned_cols=84 Identities=32% Similarity=0.470 Sum_probs=71.6
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.+++.+.......|||.+.++.+ ...+++|..|.+||||+++| |++||.|++|||+.+.++++.+++..++.
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~---- 92 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAE--YGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS---- 92 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTT--TTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT----
T ss_pred cEEEEEEEECCCCccCEEEECccc--CCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc----
Confidence 556677765555789999998653 34689999999999999999 99999999999999999999999999976
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
...+.|+|.|.
T Consensus 93 ~~~v~l~v~R~ 103 (128)
T 1uf1_A 93 SRHLILTVKDV 103 (128)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEEC
Confidence 46899999874
No 149
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=1.5e-12 Score=102.06 Aligned_cols=86 Identities=20% Similarity=0.269 Sum_probs=72.5
Q ss_pred eeEEEEEEcCCCCcccEEEEcccC-----------------------C---CCCCCEEEEeecCCChhhhcCCCCCCCEE
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSN-----------------------K---GGDGGIYVGSIMKGGAVALDGRIEPGDMI 88 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~-----------------------~---~~~~gi~I~~V~~Gg~A~~~G~L~~GD~I 88 (245)
..++|.|.+.. .+|||+|.+... . ....+++|..|.++|||+++| |++||+|
T Consensus 8 ~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 45678888776 789999986210 0 023679999999999999999 9999999
Q ss_pred EeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 89 LQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 89 l~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++|||+++.++++++++++|+.. +..|.|+|.+.
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~---g~~v~l~v~r~ 119 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNS---DTTLELSVMPK 119 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTC---TTEEEEECCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEEC
Confidence 99999999999999999999986 78899999874
No 150
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.32 E-value=8.9e-12 Score=103.73 Aligned_cols=73 Identities=30% Similarity=0.551 Sum_probs=66.2
Q ss_pred CcccEEEEcccCC------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEE
Q psy1022 47 NFLGISIVGQSNK------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKL 120 (245)
Q Consensus 47 ~~LG~sI~gg~~~------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L 120 (245)
.+|||+|.|+.+. ....+++|..|.+||||++ | |++||.|++|||+++.+++|.+++.+++.. ++.|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~---~~~v~l 76 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF---QNTVEL 76 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHC---CSEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEE
Confidence 5799999998641 2367999999999999999 7 999999999999999999999999999998 678999
Q ss_pred EEEe
Q psy1022 121 VVAK 124 (245)
Q Consensus 121 ~V~r 124 (245)
+|.|
T Consensus 77 ~v~r 80 (195)
T 2qbw_A 77 IIVR 80 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 151
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.2e-11 Score=95.40 Aligned_cols=82 Identities=28% Similarity=0.447 Sum_probs=71.6
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.+.|.|.+.. .+|||.+.++. +.+++|..|.+|+||+++| |++||+|++|||+.+.++++.+++..++..
T Consensus 19 ~~~~v~l~~~~-~~lG~~~~~~~----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~--- 89 (117)
T 1uit_A 19 EPRHVKVQKGS-EPLGISIVSGE----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ--- 89 (117)
T ss_dssp CCEEEEEECSS-CCCCEEEEECT----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC---
T ss_pred CCEEEEEEeCC-CCccEEEEccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 56688888765 78999999864 4699999999999999999 999999999999999999999988777665
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 90 g~~v~l~v~r~ 100 (117)
T 1uit_A 90 CDTITILAQYN 100 (117)
T ss_dssp CSEEEEEECCC
T ss_pred CCeEEEEEEEC
Confidence 77899999873
No 152
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=2.3e-11 Score=90.29 Aligned_cols=69 Identities=25% Similarity=0.440 Sum_probs=61.6
Q ss_pred cCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEE
Q psy1022 43 MDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVV 122 (245)
Q Consensus 43 k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V 122 (245)
.+...+|||.+.+ + +|.+|.+||+|+++| |++||+|++|||.++.++++++++++|+.. +..+.|+|
T Consensus 20 ~~~~~~lG~~~~~--------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~---g~~v~l~v 86 (90)
T 1y7n_A 20 PDLRYQLGFSVQN--------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA---VGEIHMKT 86 (90)
T ss_dssp SSTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC---CEEEEEEE
T ss_pred CCCccccCeEecC--------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEEEEE
Confidence 4556789999854 2 899999999999999 999999999999999999999999999976 77899998
Q ss_pred Ee
Q psy1022 123 AK 124 (245)
Q Consensus 123 ~r 124 (245)
.+
T Consensus 87 ~p 88 (90)
T 1y7n_A 87 MP 88 (90)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 153
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.30 E-value=1.6e-11 Score=98.14 Aligned_cols=92 Identities=27% Similarity=0.434 Sum_probs=74.4
Q ss_pred CCceeeEEEEEEcCC---CCcccEEEEcccCC----------CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecc
Q psy1022 31 SMSLNIITVTLNMDT---VNFLGISIVGQSNK----------GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFE 97 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~---~~~LG~sI~gg~~~----------~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~ 97 (245)
.++...++|.|.+.. ..+|||++.++.+. ....+++|..|.+||||+++| |++||.|++|||+.+.
T Consensus 19 ~~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~ 97 (139)
T 2vz5_A 19 YFQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMT 97 (139)
T ss_dssp ---CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECT
T ss_pred cCCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcC
Confidence 345577888887543 23799999886541 125799999999999999999 9999999999999999
Q ss_pred cCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 98 NMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 98 ~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
++++++++.+|+.. .+..+.|+|.|.
T Consensus 98 ~~~~~~~~~~l~~~--~g~~v~l~v~R~ 123 (139)
T 2vz5_A 98 MVTHDQARKRLTKR--SEEVVRLLVTRQ 123 (139)
T ss_dssp TCCHHHHHHHHCCT--TCSEEEEEEEEC
T ss_pred CCCHHHHHHHHHhC--CCCEEEEEEEEC
Confidence 99999999999874 257799999984
No 154
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.29 E-value=1.2e-11 Score=117.10 Aligned_cols=83 Identities=29% Similarity=0.556 Sum_probs=73.0
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+++.|.|.+. .+|||.+.|+. ..|+||.+|.+||||+++| |++||+|++|||+++.++++++++.+|+... .
T Consensus 1 ~~r~V~l~k~--~~lG~~i~gg~----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~-~ 72 (468)
T 3shw_A 1 SMKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP-K 72 (468)
T ss_dssp CEEEEEEECC--SSCCEEEEEET----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC-T
T ss_pred CceEEEEecC--CccceEEEccC----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC-C
Confidence 3577888774 78999999875 5789999999999999999 9999999999999999999999999999831 1
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
++.|+|+|.+.
T Consensus 73 g~~v~L~V~r~ 83 (468)
T 3shw_A 73 GEEVTILAQKK 83 (468)
T ss_dssp TSEEEEEEEEC
T ss_pred CCEEEEEEEEC
Confidence 67899999983
No 155
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.28 E-value=1.8e-11 Score=95.95 Aligned_cols=82 Identities=29% Similarity=0.560 Sum_probs=68.7
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
++..+.+.+ ..+|||.+.++. +.+++|..|.+||||+++| |++||+|++|||..+.++++++++.+|+... .
T Consensus 29 ~~~~~~~~~--~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~ 100 (124)
T 3tsv_A 29 SMKLVKFRK--GDSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP-K 100 (124)
T ss_dssp CCEEEEEEC--SSCCCEEEEECT----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSC-T
T ss_pred CeEEEEcCC--CCceeEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC-C
Confidence 444444433 468999999854 4789999999999999999 9999999999999999999999999888531 2
Q ss_pred CCcEEEEEEe
Q psy1022 115 PGPIKLVVAK 124 (245)
Q Consensus 115 ~~~V~L~V~r 124 (245)
+..+.|+|.+
T Consensus 101 g~~v~l~v~R 110 (124)
T 3tsv_A 101 GEEVTILAQK 110 (124)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 6789999987
No 156
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.27 E-value=5.2e-11 Score=87.38 Aligned_cols=84 Identities=18% Similarity=0.316 Sum_probs=68.8
Q ss_pred eeEEEEEEcCCCC--cccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 35 NIITVTLNMDTVN--FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 35 ~i~~V~L~k~~~~--~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..+.+.|.+.+.. .|||.+... ..+++|..|.+||||+++| |++||.|++|||..+.+.+++++..+|+...
T Consensus 3 ~~~~~~~~~~~~~~~~lG~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2eaq_A 3 SDMRISINQTPGKSLDFGFTIKWD-----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQ 76 (90)
T ss_dssp EEEEEEEECCTTCSSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCCcccEEEEec-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcC
Confidence 4456777765544 799998753 5689999999999999999 9999999999999998888999999998521
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
.+..+.|+|.|.
T Consensus 77 -~g~~v~l~v~R~ 88 (90)
T 2eaq_A 77 -ETGHLVMDVRRY 88 (90)
T ss_dssp -HHTEEEEEEEEE
T ss_pred -CCCEEEEEEEeC
Confidence 157899999873
No 157
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=8e-11 Score=91.92 Aligned_cols=92 Identities=30% Similarity=0.445 Sum_probs=73.7
Q ss_pred CCceeeEEEEEEcCC-CCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 31 SMSLNIITVTLNMDT-VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 31 ~~~~~i~~V~L~k~~-~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
....+...+.+.+.. ..+|||.+..........+++|..|.++|||+++|+|++||.|++|||+.+.+ ++++..+|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~ 92 (124)
T 1wh1_A 15 REELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLT 92 (124)
T ss_dssp CSSCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHT
T ss_pred cCcceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHH
Confidence 345677777776543 45799999985432224799999999999999999999999999999999984 889999998
Q ss_pred hccCCCCcEEEEEEecC
Q psy1022 110 EVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~~ 126 (245)
.. .+..|.|+|.|..
T Consensus 93 ~~--~g~~v~l~v~R~g 107 (124)
T 1wh1_A 93 SE--ENKNFSLLIARPE 107 (124)
T ss_dssp CS--SCCSCCEEEEECS
T ss_pred hC--CCCEEEEEEEECC
Confidence 74 2678999999843
No 158
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=3.1e-12 Score=96.68 Aligned_cols=82 Identities=20% Similarity=0.295 Sum_probs=70.2
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
.++|.+. ...+|||.+.++.+ ...+++|..|.+++||+++| |++||.|++|||+.+.++++++++.+|+.. +
T Consensus 6 ~~~v~~~--~~~~lG~~l~~g~~--~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---g 77 (103)
T 1v5l_A 6 SGNVVLP--GPAPWGFRLSGGID--FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA---S 77 (103)
T ss_dssp CBCCEEE--SSSCCSBCCEEETT--TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC---C
T ss_pred EEEEEEc--CCCCcCEEEecccc--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---C
Confidence 3445553 34689999998764 24589999999999999999 999999999999999999999999999987 7
Q ss_pred CcEEEEEEec
Q psy1022 116 GPIKLVVAKC 125 (245)
Q Consensus 116 ~~V~L~V~r~ 125 (245)
..+.|+|.|.
T Consensus 78 ~~v~l~v~R~ 87 (103)
T 1v5l_A 78 YQLCLKIDRA 87 (103)
T ss_dssp SEEECEECCC
T ss_pred CeEEEEEEEC
Confidence 8899999873
No 159
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.22 E-value=1.3e-10 Score=83.10 Aligned_cols=74 Identities=28% Similarity=0.466 Sum_probs=64.6
Q ss_pred EEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEE
Q psy1022 40 TLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIK 119 (245)
Q Consensus 40 ~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~ 119 (245)
.+..+....|||.+. .+++|..|.++|+|+++|+|++||.|++|||..+.+++++++..+|+.. .+.+.
T Consensus 6 ~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~~~v~ 74 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS---KGKLK 74 (81)
T ss_dssp EECCSTTCCCCEEEE--------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS---TTEEE
T ss_pred EEECCCCCCCCEEEe--------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC---CCeEE
Confidence 455566678998876 3689999999999999999999999999999999999999999999986 56888
Q ss_pred EEEEe
Q psy1022 120 LVVAK 124 (245)
Q Consensus 120 L~V~r 124 (245)
|+|.|
T Consensus 75 l~v~R 79 (81)
T 2rcz_A 75 MVVQR 79 (81)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98876
No 160
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.21 E-value=1.3e-10 Score=85.30 Aligned_cols=79 Identities=30% Similarity=0.437 Sum_probs=66.4
Q ss_pred eEEEEEE-cCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 36 IITVTLN-MDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 36 i~~V~L~-k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
.++|.+. .+....|||.+. .+++|..|.+||+|+++|+|++||.|++|||..+.+++++++..+|+..
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--- 71 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--- 71 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT---
T ss_pred cEEEEEEeCCCCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---
Confidence 3455554 334467998875 3689999999999999999999999999999999999999999999986
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
.+.+.|+|.|.
T Consensus 72 ~~~v~l~v~r~ 82 (92)
T 3cyy_A 72 KGKLKMVVQRD 82 (92)
T ss_dssp TTEEEEEEEC-
T ss_pred CCcEEEEEEeC
Confidence 56899999873
No 161
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=2.1e-11 Score=94.01 Aligned_cols=81 Identities=15% Similarity=0.287 Sum_probs=69.2
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
..++|.|.++ ..+|||.+.+ ..+++|..|.++++|+++| |++||.|++|||+.+.++++++++++|+...
T Consensus 15 ~~r~v~l~~~-~~~~G~~l~~------~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~-- 84 (111)
T 1vae_A 15 PPRGIHFTVE-EGDLGFTLRG------NTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFG-- 84 (111)
T ss_dssp CCCCCCEECC-SSCCSCCEES------SSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTT--
T ss_pred CCeEEEEEcC-CCcccEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--
Confidence 3456778775 4789999976 4678999999999999999 9999999999999999999999999999861
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..+.|+|.+.
T Consensus 85 ~~~v~l~V~~~ 95 (111)
T 1vae_A 85 GEEVEMKVVSL 95 (111)
T ss_dssp TSEECEEEECE
T ss_pred CceEEEEEEec
Confidence 33599999874
No 162
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.21 E-value=8.3e-11 Score=100.91 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=73.6
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
....+.|.|.++. .+|||.|.++.+ ..+++|..|.+||+|+++| |++||+|++|||+.+.++++++++.+|+..
T Consensus 7 ~~~~r~v~l~k~~-~glG~~l~~~~~---~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~- 80 (216)
T 2krg_A 7 MLRPRLCTMKKGP-SGYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG- 80 (216)
T ss_dssp TCCCEEEEEECCS-SSSCEEECCCSS---SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH-
T ss_pred ccceEEEEEEeCC-CCceEEEEecCC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc-
Confidence 4567888888765 689999998653 5699999999999999999 999999999999999999999999999987
Q ss_pred CCCCcE-EEEEEe
Q psy1022 113 QKPGPI-KLVVAK 124 (245)
Q Consensus 113 ~~~~~V-~L~V~r 124 (245)
+..| .|+|.+
T Consensus 81 --g~~v~~l~V~R 91 (216)
T 2krg_A 81 --GDETKLLVVDR 91 (216)
T ss_dssp --CSEEEEEECCH
T ss_pred --CCeEEEEEEEE
Confidence 6678 888765
No 163
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.20 E-value=7e-11 Score=109.60 Aligned_cols=84 Identities=29% Similarity=0.532 Sum_probs=72.6
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.++..|.+.++. +|||+|.++. +.|++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+...
T Consensus 8 ~~~~~v~~~k~~--~lG~~i~gg~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~- 79 (391)
T 3tsz_A 8 PSMKLVKFRKGD--SVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP- 79 (391)
T ss_dssp -CEEEEEEECCS--SCCEEEEEET----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC-
T ss_pred CCcEEEEeecCC--ceeEEEEecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc-
Confidence 366778887654 6999999875 5899999999999999999 9999999999999999999999999999621
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
.+..|+|+|.+.
T Consensus 80 ~g~~v~l~v~r~ 91 (391)
T 3tsz_A 80 KGEEVTILAQKK 91 (391)
T ss_dssp TTSEEEEEEEEC
T ss_pred CCCeEEEEEeeC
Confidence 167899999983
No 164
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.17 E-value=1.5e-10 Score=88.09 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=68.7
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
...+.|.+ ...++||.+... ..+.+|.+|.+||||+++| |++||+|++|||..+...++++++..++.+..++
T Consensus 18 ~~~l~l~~-~~~g~G~~l~~~-----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g 90 (101)
T 3qik_A 18 AKRLLILP-QEEDYGFDIEEK-----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSR 90 (101)
T ss_dssp EEEEEECC-CSSSSSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTT
T ss_pred cCeEEEEe-CCCcccEEEEcc-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccC
Confidence 34455544 357899999873 5678999999999999999 9999999999999998889999999998853347
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
..|.|.|+.
T Consensus 91 ~~v~LLV~~ 99 (101)
T 3qik_A 91 RPLRLLVAT 99 (101)
T ss_dssp CCEEEEEEC
T ss_pred CeEEEEEec
Confidence 889999874
No 165
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.17 E-value=3.4e-10 Score=88.08 Aligned_cols=90 Identities=16% Similarity=0.244 Sum_probs=68.6
Q ss_pred ceeeEEEEEEcCCCCcccEEEEcccC-CCCCCCEEEEeecC--CChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHH
Q psy1022 33 SLNIITVTLNMDTVNFLGISIVGQSN-KGGDGGIYVGSIMK--GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLR 109 (245)
Q Consensus 33 ~~~i~~V~L~k~~~~~LG~sI~gg~~-~~~~~gi~I~~V~~--Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr 109 (245)
...+..+.+.+...+.+||.+..... .....+++|..|.+ ++||+++| |++||.|++|||..+.+++++++..+|+
T Consensus 13 ~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 13 PYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp CCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred CceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 33444444443433456766653221 11347899999999 99999999 9999999999999999999999999998
Q ss_pred hccCCCCcEEEEEEecC
Q psy1022 110 EVVQKPGPIKLVVAKCW 126 (245)
Q Consensus 110 ~~~~~~~~V~L~V~r~~ 126 (245)
.. +..+.|+|.|..
T Consensus 92 ~~---g~~v~l~v~R~g 105 (118)
T 2yub_A 92 QT---SQTLQLLIEHDP 105 (118)
T ss_dssp CC---SSCEEEEEEECS
T ss_pred hC---CCEEEEEEEECC
Confidence 76 678999998843
No 166
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.17 E-value=2.1e-11 Score=112.96 Aligned_cols=91 Identities=19% Similarity=0.352 Sum_probs=76.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.+.+.|.|.+..+++|||+|.+........+++|..|.+||||+++|+|++||+|++|||+++.++++++++.+|+....
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred ccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 46788999988788999999984321223579999999999999999999999999999999999999999999988622
Q ss_pred CCCcEEEEEEec
Q psy1022 114 KPGPIKLVVAKC 125 (245)
Q Consensus 114 ~~~~V~L~V~r~ 125 (245)
+..++|+|.+.
T Consensus 283 -~~~v~l~v~r~ 293 (388)
T 3suz_A 283 -QTQVKLNIVSC 293 (388)
T ss_dssp -CSCEEEEEEEC
T ss_pred -CCccccccccc
Confidence 45699999884
No 167
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.17 E-value=2.3e-10 Score=93.28 Aligned_cols=83 Identities=27% Similarity=0.419 Sum_probs=72.4
Q ss_pred eeeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccC
Q psy1022 34 LNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQ 113 (245)
Q Consensus 34 ~~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~ 113 (245)
.++++|.|.+....+|||.+... ..+++|..|.+||||+++| |++||+|++|||..+.+++++.+..+++...
T Consensus 3 ~~~r~v~l~k~~~~~lG~~~~~~-----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~- 75 (166)
T 1w9e_A 3 MDPREVILCKDQDGKIGLRLKSI-----DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAF- 75 (166)
T ss_dssp CCCEEEEEECCTTSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC-
T ss_pred CCCEEEEEEeCCCCcEeEEEEeC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence 35688999988778999999873 5789999999999999999 9999999999999999999888888888761
Q ss_pred CCCcEEEEEEe
Q psy1022 114 KPGPIKLVVAK 124 (245)
Q Consensus 114 ~~~~V~L~V~r 124 (245)
+..+.|+|.+
T Consensus 76 -~~~v~l~vr~ 85 (166)
T 1w9e_A 76 -GEKITMTIRD 85 (166)
T ss_dssp -SSEEEEEEEC
T ss_pred -CCEEEEEEEc
Confidence 4589999953
No 168
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.16 E-value=3.2e-10 Score=94.83 Aligned_cols=87 Identities=24% Similarity=0.439 Sum_probs=73.8
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCC--CCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhcc
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNK--GGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVV 112 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~--~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~ 112 (245)
..++|.+.+. ..+|||.+.++... ....+++|..|.++|+|+++|+|++||+|++|||+.+.++++++++++|+..
T Consensus 106 ~~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 183 (200)
T 2qt5_A 106 RTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC- 183 (200)
T ss_dssp EEEEEEEECB-TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred eEEEEEEecC-CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 5566666654 47899999986532 1246899999999999999999999999999999999999999999999985
Q ss_pred CCCCcEEEEEEec
Q psy1022 113 QKPGPIKLVVAKC 125 (245)
Q Consensus 113 ~~~~~V~L~V~r~ 125 (245)
+..+.|+|.|.
T Consensus 184 --~~~v~l~v~R~ 194 (200)
T 2qt5_A 184 --GQEATLLIEYD 194 (200)
T ss_dssp --CSEEEEEEEEE
T ss_pred --CCeEEEEEEEC
Confidence 78899999873
No 169
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.15 E-value=2.8e-10 Score=112.88 Aligned_cols=84 Identities=26% Similarity=0.514 Sum_probs=75.5
Q ss_pred eeEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 35 NIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 35 ~i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
+.+.|.|.+.. .+|||+|.++.+ ..+++|..|.+||+|+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 307 ~~~~v~l~~~~-~~lG~~i~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~--- 379 (721)
T 2xkx_A 307 EPRRIVIHRGS-TGLGFNIVGGED---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA--- 379 (721)
T ss_pred ceEEEEEEECC-CCccEEEeccCC---CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc---
Confidence 56778888764 689999998654 57999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
++.|.|+|.+.
T Consensus 380 ~~~v~L~v~r~ 390 (721)
T 2xkx_A 380 GQTVTIIAQYK 390 (721)
T ss_pred CCeEEEEEEeC
Confidence 78899999874
No 170
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.12 E-value=4.8e-10 Score=93.64 Aligned_cols=86 Identities=27% Similarity=0.430 Sum_probs=73.3
Q ss_pred EEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCC
Q psy1022 37 ITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPG 116 (245)
Q Consensus 37 ~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~ 116 (245)
.++.|.+.....|||.+..........+++|..|.+||+|+++|+|++||.|++|||..+.+++++++.++|+.. +.
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~---~~ 185 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC---ED 185 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC---TT
T ss_pred EEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---CC
Confidence 566676555567999998854322246899999999999999999999999999999999999999999999987 78
Q ss_pred cEEEEEEec
Q psy1022 117 PIKLVVAKC 125 (245)
Q Consensus 117 ~V~L~V~r~ 125 (245)
.+.|+|.|.
T Consensus 186 ~v~l~v~R~ 194 (196)
T 1p1d_A 186 LVKLKIRKD 194 (196)
T ss_dssp CEEEEEECC
T ss_pred EEEEEEEeC
Confidence 899999874
No 171
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31
Probab=98.95 E-value=4.5e-10 Score=87.99 Aligned_cols=54 Identities=24% Similarity=0.364 Sum_probs=49.3
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeecc-----------cccccccc--eeeeecccc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHTV-----------NKITFSEQ--CYYIFGDLL 242 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~-----------~k~~f~e~--cyy~~~~~~ 242 (245)
++|+||||.++.. +.+|.||..+|..||++|||.|+. ++..|-++ +||-|.|.+
T Consensus 40 GsdlVdWL~~~~~-~~sR~eAv~lgq~Ll~~G~i~hV~~~s~~~~~~~~~~~~f~d~~~~lYrF~~~~ 106 (120)
T 1v3f_A 40 GSSLVDWLISSNF-AASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFAESY 106 (120)
T ss_dssp HHHHHHHHHHTTS-CSSHHHHHHHHHHHHHHTSEEECSSSSCSSCCCSSCCCCCCCSSSCEEEECSSS
T ss_pred hHHHHHHHHHcCC-CCCHHHHHHHHHHHHHCCCeEEccccccccccccccccceecCCccEEEeChhh
Confidence 6999999999964 889999999999999999999999 78999886 799999874
No 172
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.88 E-value=7.7e-10 Score=103.57 Aligned_cols=56 Identities=20% Similarity=0.503 Sum_probs=49.4
Q ss_pred ccCCC-cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeeccc--ccccc-cceeeeecc
Q psy1022 183 IAETE-SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHTVN--KITFS-EQCYYIFGD 240 (245)
Q Consensus 183 ~p~~~-~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~~--k~~f~-e~cyy~~~~ 240 (245)
+|... |+|+|+||.+|+. + ++.||..+|+.||++|||.|+.+ +++|. ++|||.|..
T Consensus 48 ~p~~F~Gsd~V~WL~~~~~-~-~~~EA~~lg~~L~~~Gyi~~v~d~~~~~fk~d~~~Yrfq~ 107 (424)
T 2pbi_A 48 VPHAMTGGDVLQWITQRLW-I-SNLEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQT 107 (424)
T ss_dssp SCCCEEHHHHHHHHHHHHT-C-CHHHHHHHHHHHHHTTSEEESSSTTCCSCCSSSCEEEECC
T ss_pred CCCccccHHHHHHHHHcCC-C-ChHHHHHHHHHHHHCCCEEeCCccccccccCCCeeEEeCC
Confidence 44443 7999999999994 6 56999999999999999999999 68898 899999985
No 173
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A
Probab=98.57 E-value=2.5e-08 Score=76.69 Aligned_cols=52 Identities=25% Similarity=0.510 Sum_probs=44.8
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeeccc----------ccccccce--eeeecc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHTVN----------KITFSEQC--YYIFGD 240 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~~----------k~~f~e~c--yy~~~~ 240 (245)
++|+||||.++. ...+|.||-.|+..||++|||.|+-+ +-.|=.++ +|-|=|
T Consensus 40 GselVdWLi~~~-~~~~R~EAv~lgq~Ll~~G~i~hV~d~~~~~~~~~~~~~F~D~~~~lYrF~~ 103 (109)
T 1uhw_A 40 GSGVIDWLVSNK-LVRNRQEGLMISASLLSEGYLQPAGDLSKNAADGIAENPFLDSPDAFYYFPD 103 (109)
T ss_dssp HHHHHHHHHHHT-SSSSHHHHHHHHHHHHHHTSSEECSSSHHHHHHHSSSCCCCCCSSCCEECTT
T ss_pred chHHHHHHHHcC-CCCCHHHHHHHHHHHHHCCeEEeCccccccccccccccceecCCCcEEEEcC
Confidence 699999999975 68899999999999999999999976 67897765 566644
No 174
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.57 E-value=5.6e-07 Score=72.98 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=62.5
Q ss_pred eEEEEEEcCCCCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCC
Q psy1022 36 IITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKP 115 (245)
Q Consensus 36 i~~V~L~k~~~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~ 115 (245)
.+++.|.++....|||.+.. + +|..|.++|+|+++| |++||.|++|||..+.++.++++...++.. +
T Consensus 89 ~~~v~l~~~~~~~lG~~~~~--------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~---g 155 (166)
T 1w9e_A 89 ERTITMHKDSTGHVGFIFKN--------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS---G 155 (166)
T ss_dssp CEEEEEECCTTSCCSEEEET--------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---C
T ss_pred cEEEEEecCCCCcEeEEEeC--------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhC---C
Confidence 35566665555678988872 2 899999999999999 999999999999999999999988888776 6
Q ss_pred CcEEEEEEe
Q psy1022 116 GPIKLVVAK 124 (245)
Q Consensus 116 ~~V~L~V~r 124 (245)
..+.|.+..
T Consensus 156 ~~~~l~v~~ 164 (166)
T 1w9e_A 156 TVVTITIMP 164 (166)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 777777764
No 175
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.53 E-value=1e-08 Score=94.80 Aligned_cols=66 Identities=23% Similarity=0.406 Sum_probs=0.0
Q ss_pred CCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 46 VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 46 ~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
..+|||.+.++ +|..|.+||+|+++| |++||+|++|||+++.++++++++.+|+.. ++.+.|+|.+
T Consensus 307 ~~~lG~~i~~g---------~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~---~~~v~L~V~p 372 (388)
T 3suz_A 307 KYQLGFSVQNG---------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNS---VGEIHMKTMP 372 (388)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCccceEEecC---------EEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC---CCeEEEEEEe
Confidence 35688877652 899999999999999 999999999999999999999999999987 7889999875
No 176
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.52 E-value=3.8e-07 Score=83.96 Aligned_cols=75 Identities=20% Similarity=0.298 Sum_probs=64.0
Q ss_pred CCCcccEEEEcc-cCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEE
Q psy1022 45 TVNFLGISIVGQ-SNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVA 123 (245)
Q Consensus 45 ~~~~LG~sI~gg-~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~ 123 (245)
...++|+.+... . ...+++|..|.+||||+++| |++||.|++|||+.+.+++.++++.+|+.. .+..|+|+|.
T Consensus 83 ~~~giG~~~~~~~~---~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~g~~v~l~v~ 156 (388)
T 1fc6_A 83 SVTGVGLEITYDGG---SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGE--ADSQVEVVLH 156 (388)
T ss_dssp SCBBCSEEEEECTT---CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBS--TTCEEEEEEE
T ss_pred ceEEEEEEEEEeec---CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--CCCEEEEEEE
Confidence 345789988763 2 15789999999999999999 999999999999999999999999999854 3677999998
Q ss_pred ec
Q psy1022 124 KC 125 (245)
Q Consensus 124 r~ 125 (245)
|.
T Consensus 157 r~ 158 (388)
T 1fc6_A 157 AP 158 (388)
T ss_dssp ET
T ss_pred eC
Confidence 84
No 177
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31
Probab=98.50 E-value=5.4e-08 Score=76.74 Aligned_cols=53 Identities=28% Similarity=0.539 Sum_probs=45.5
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccceeec----------ccccccccc--eeeeeccc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGYIRHT----------VNKITFSEQ--CYYIFGDL 241 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~----------~~k~~f~e~--cyy~~~~~ 241 (245)
|+|+||||.++. .+.+|.||-.|+..||++|||.|+ .++--|=.+ ++|-|-|.
T Consensus 50 GsdlVdWLl~~~-~~~sR~EAv~lg~~Ll~~G~i~hV~d~s~~~~~~~~~~~f~dd~~~lYrF~~~ 114 (127)
T 2cso_A 50 GNCVIDWLVSNQ-SVRNRQEGLMIASSLLNEGYLQPAGDMSKSAVDGTAENPFLDNPDAFYYFPDS 114 (127)
T ss_dssp HHHHHHHHHHTT-SCSSHHHHHHHHHHHHHHTSSEEESHHHHHHHHSSCSCCCCCCTTCEEECSSS
T ss_pred chHHHHHHHHcC-CCCCHHHHHHHHHHHHHCCeEEeCccccccccccccccceecCCCcEEEecCC
Confidence 599999999975 678999999999999999999999 677777544 68888764
No 178
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.47 E-value=7.5e-07 Score=67.72 Aligned_cols=57 Identities=18% Similarity=0.476 Sum_probs=50.7
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.++|||+++| |++||.|++|||..+.+ .++....|+. +..+.|+|.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R~ 90 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRRG 90 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH----CSSEEEEEEET
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 5789999999999999999 99999999999999974 7888888876 46799999873
No 179
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.45 E-value=9.2e-07 Score=66.12 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=49.6
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
..|++|..|.++|||+. | |++||.|++|||..+.+ .++....|.... .+..+.|+|.|
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~-~g~~v~l~v~R 63 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKK-VGDTVKINYKH 63 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSC-TTCEEEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCC-CCCEEEEEEEE
Confidence 57999999999999995 7 99999999999999975 678888887642 25789999987
No 180
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.44 E-value=4.3e-07 Score=67.34 Aligned_cols=59 Identities=20% Similarity=0.334 Sum_probs=50.6
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.++|||+. | |++||.|++|||..+.+ .++...+|+... .+..+.|+|.|.
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 62 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQ-AGDRVRVTFIRD 62 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSC-TTCCEEEEEEET
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCC-CCCEEEEEEEEC
Confidence 56899999999999998 8 99999999999999975 578888887642 267899999983
No 181
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.37 E-value=1.7e-07 Score=69.35 Aligned_cols=57 Identities=19% Similarity=0.365 Sum_probs=48.7
Q ss_pred CEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 64 GIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 64 gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
|++|..|.+||||++ | |++||.|++|||..+.+ .++...+|+... .+..++|+|.|.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKK-AGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCC-SSCEECEEEESS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCC-CCCEEEEEEEEC
Confidence 678999999999999 8 99999999999999975 678888887641 267899999983
No 182
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.34 E-value=2.2e-06 Score=65.03 Aligned_cols=57 Identities=26% Similarity=0.449 Sum_probs=49.7
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.++|||++.| |++||.|++|||..+.+ ..+....|+. +..+.|+|.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----g~~v~l~v~R~ 90 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVLT----ESPLLLEVRRG 90 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH----CSSEEEEEEET
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 5789999999999999999 99999999999999975 6777777753 67899999873
No 183
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.30 E-value=2.6e-06 Score=67.13 Aligned_cols=59 Identities=19% Similarity=0.229 Sum_probs=50.1
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.+||||+ +| |++||.|++|||..+.+ .++....|.... .+..++|+|.|.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 114 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHS-IGDTIKITYYRN 114 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSS-TTCEEEEEEEET
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCC-CCCEEEEEEEEC
Confidence 4789999999999999 88 99999999999999976 567777887642 267899999883
No 184
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.30 E-value=1.2e-06 Score=74.01 Aligned_cols=61 Identities=20% Similarity=0.341 Sum_probs=49.3
Q ss_pred CCCCEEEEeecCCChhhhcCCCCCC-CEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 61 GDGGIYVGSIMKGGAVALDGRIEPG-DMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 61 ~~~gi~I~~V~~Gg~A~~~G~L~~G-D~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
...|++|..|.++|||+++| |++| |+|++|||..+.++..-.. .+++.. .+..++|+|.+.
T Consensus 14 ~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~--~g~~v~l~v~R~ 75 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKAN--VEKPVKMLIYSS 75 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHT--TTSCEEEEEEET
T ss_pred CCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcC--CCCEEEEEEEec
Confidence 36789999999999999999 9999 9999999999988654332 344433 267899999874
No 185
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.27 E-value=2.7e-06 Score=63.10 Aligned_cols=56 Identities=23% Similarity=0.260 Sum_probs=47.3
Q ss_pred EEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 66 YVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 66 ~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
+|..|.++|+|+++| |++||.|++|||+.+.+ .+++...|..... +..+.|+|.|.
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~-~~~v~l~v~R~ 60 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIG-DESTTITVAPF 60 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTT-CSEEEEEEECT
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcC-CCcEEEEEEEC
Confidence 688999999999999 99999999999999975 6788888876521 25799999984
No 186
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.25 E-value=2e-06 Score=62.68 Aligned_cols=57 Identities=16% Similarity=0.246 Sum_probs=48.4
Q ss_pred CEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 64 GIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 64 gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.++|..|.++|+|+++| |++||.|++|||..+.+ .++....|+.. .+..+.|+|.|.
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~--~g~~v~l~v~R~ 61 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDN--PGXSLALEIERQ 61 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHC--TTCCEEEEEEET
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcC--CCCeEEEEEEEC
Confidence 46788999999999999 99999999999999975 67888888764 256899999873
No 187
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.22 E-value=2.7e-06 Score=61.88 Aligned_cols=59 Identities=15% Similarity=0.206 Sum_probs=47.9
Q ss_pred CCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 63 ~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.|+.|..+.++++|++.| |++||.|++|||..+.+ .++..+++.... .+..+.|+|.|.
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~-~g~~v~l~v~R~ 77 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMN-EMTEMSLTVERD 77 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGG-GCSEEEEEEEET
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 467788888888999999 99999999999999975 567777776542 256899999873
No 188
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.15 E-value=8.7e-06 Score=72.85 Aligned_cols=59 Identities=22% Similarity=0.351 Sum_probs=50.3
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
..+++|..|.+|+||++.| |++||.|++|||..+.+ ..+....|... ..+..++|+|.|
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R 299 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSK-APGATVALTFQD 299 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTS-CTTCEEEEEEEC
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhc-CCCCEEEEEEEE
Confidence 5789999999999999999 99999999999999986 56777777653 126779999987
No 189
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.13 E-value=2.2e-06 Score=79.72 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=56.5
Q ss_pred CCcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 46 VNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 46 ~~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|+||.+....+....-.++|..|.+||||+++| |++||+|++|||..+.++. +..+|+.. +..|+|+|.|.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~---g~~v~l~v~R~ 145 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGS---TRQLQIGVYKE 145 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCS---CEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCC---CCEEEEEEEeC
Confidence 45567776653320011248899999999999999 9999999999999999875 55666653 77899999885
Q ss_pred CC
Q psy1022 126 WD 127 (245)
Q Consensus 126 ~~ 127 (245)
..
T Consensus 146 g~ 147 (403)
T 3k50_A 146 VV 147 (403)
T ss_dssp EC
T ss_pred Cc
Confidence 43
No 190
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.10 E-value=5e-06 Score=80.91 Aligned_cols=69 Identities=13% Similarity=0.237 Sum_probs=55.3
Q ss_pred CcccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 47 NFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 47 ~~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..||+.+... .++++|..|.+||||+++| |++||.|++|||..+.. ++..++|+.. ..+..|+|+|.|.
T Consensus 485 ~~lG~~~~~~-----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~-~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 485 VNFGAKYKAS-----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERY-IPGDTVTIHAFRR 553 (597)
T ss_dssp CCCSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTC-CTTCEEEEEEEET
T ss_pred cccceEEecc-----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhc-CCCCEEEEEEEEC
Confidence 4789988653 4689999999999999999 99999999999999953 3455556543 1267899999983
No 191
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.09 E-value=9.6e-06 Score=68.38 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=56.8
Q ss_pred CcccEEEEcccCC-CCCCCEEEEeecCCChhhhcCCCCC-CCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 47 NFLGISIVGQSNK-GGDGGIYVGSIMKGGAVALDGRIEP-GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 47 ~~LG~sI~gg~~~-~~~~gi~I~~V~~Gg~A~~~G~L~~-GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
..||+.+..-... ....+++|..|.++|||+++| |++ ||.|++|||. +. +.++..++|+.. .+..+.|+|.+
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~--~g~~v~l~v~r 168 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETH--EAKPLKLYVYN 168 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHT--TTSCEEEEEEE
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhC--CCCeEEEEEEE
Confidence 4689988742211 123789999999999999999 999 9999999997 54 456777778775 36789999987
Q ss_pred c
Q psy1022 125 C 125 (245)
Q Consensus 125 ~ 125 (245)
.
T Consensus 169 ~ 169 (209)
T 3rle_A 169 T 169 (209)
T ss_dssp T
T ss_pred C
Confidence 3
No 192
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.08 E-value=1e-05 Score=73.44 Aligned_cols=60 Identities=20% Similarity=0.338 Sum_probs=52.0
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|++|..|.+||||+++| |++||.|++|||..+.+ ..+...+|+... .+..++|+|.|.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~-~g~~v~l~v~R~ 321 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTE-PGTKVKLGLLRN 321 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSC-TTCEEEEEEEET
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 4789999999999999999 99999999999999984 778888887641 267899999983
No 193
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.07 E-value=1.4e-05 Score=71.39 Aligned_cols=60 Identities=25% Similarity=0.325 Sum_probs=51.8
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.++|||+++| |++||.|++|||+.+.+ .++...+|+.. ..+..++|+|.|.
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~ 302 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEI-RPGSVIPVVVMRD 302 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTS-CTTCEEEEEEESS
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhc-CCCCEEEEEEEEC
Confidence 4789999999999999999 99999999999999975 67888888763 1267899999973
No 194
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.01 E-value=1.4e-05 Score=74.74 Aligned_cols=58 Identities=28% Similarity=0.437 Sum_probs=52.3
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..+++|..|.+||+|+++| |++||.|++|||+.+.+ .++..++|+.. ++.+.|+|.|.
T Consensus 362 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~ 419 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAK---PAIIALQIVRG 419 (436)
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhC---CCeEEEEEEEC
Confidence 3589999999999999999 99999999999999974 78999999885 67899999883
No 195
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.98 E-value=2.2e-05 Score=61.27 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=47.8
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEe
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAK 124 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r 124 (245)
..+++|..|.+++||++. |++||.|++|||..+.+ .++....|+... .+..+.|+| |
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~-~g~~v~l~V-R 80 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTIS-VGEVINITT-D 80 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCC-TTCEEEEEE-T
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcC-CCCEEEEEE-E
Confidence 578999999999999997 99999999999999985 577777777431 256789999 6
No 196
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.97 E-value=1.8e-05 Score=59.48 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=44.9
Q ss_pred CEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 64 GIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 64 gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
|++|..+.++++|++.| |++||.|++|||..+.++ ++...++.... .+..+.|+|.|.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~-~g~~v~l~v~R~ 95 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMN-EMTEMSLTVERD 95 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHT-TCSEEEEEEEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcC-CCCeEEEEEEEC
Confidence 56677778888889999 999999999999999875 44555665431 256899999873
No 197
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.96 E-value=1.4e-05 Score=74.75 Aligned_cols=60 Identities=20% Similarity=0.358 Sum_probs=50.0
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|++|..|.+||||+++| |++||+|++|||..+.+ .++....|... ..+..++|+|.|.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~--~~~l~~~l~~~-~~g~~v~l~v~R~ 321 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATT-EPGTKVKLGLLRN 321 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhc-CCCCEEEEEEEEC
Confidence 4689999999999999999 99999999999999986 46666666643 1257899999883
No 198
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=4.3e-06 Score=63.74 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=41.4
Q ss_pred cchhhhhhhhhcc------cchhhHHHHHHHHHHhhccceeeccccc---ccccc-eeeee
Q psy1022 188 SADVVDWLDKHVE------GFTDRREARKYASQMLKFGYIRHTVNKI---TFSEQ-CYYIF 238 (245)
Q Consensus 188 ~~d~v~wl~~~v~------g~~~r~~a~~~a~~~l~~~~i~h~~~k~---~f~e~-cyy~~ 238 (245)
++|+||||.+|+. ...+|.||-+++..||++|+|.|+-+|- .|-.. -+|-|
T Consensus 43 GsE~VdWL~~~l~~~~~fg~~~sR~eAv~lgq~Ll~~gvi~hV~~~~~~~~F~D~~~lYrF 103 (105)
T 2ysr_A 43 AGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWGSENVDDNNQLFRF 103 (105)
T ss_dssp HHHHHHHHHHHHHHSSSSTTTCCHHHHHHHHHHHHHTTSSEESSCCCSCSCCCSSSCEEEC
T ss_pred chHHHHHHHHhcccccccCccCCHHHHHHHHHHHHHCCCeEeccCccCcccccCCCeeEEe
Confidence 5999999999952 3679999999999999999999998873 56644 44444
No 199
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.91 E-value=3.8e-05 Score=72.14 Aligned_cols=59 Identities=20% Similarity=0.391 Sum_probs=50.8
Q ss_pred CCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 63 ~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.|++|..|.++|||+++| |++||.|++|||..+.+ ..+....|.... .+..++|+|.|.
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~~~-~g~~v~l~V~R~ 340 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISLLR-VGSTVKIIVERD 340 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHTSC-TTCEEEEEEEET
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcC-CCCEEEEEEEEC
Confidence 789999999999999999 99999999999999986 577777777532 267899999983
No 200
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.90 E-value=3.3e-05 Score=69.35 Aligned_cols=57 Identities=18% Similarity=0.476 Sum_probs=50.2
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|++|..|.+||||++.| |++||.|++|||..+.+ .++..+.|+. +..+.|+|.|.
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~----~~~v~l~v~R~ 311 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT----QSQLAVQIRRG 311 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT----CSSEEEEEEET
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 3689999999999999999 99999999999999975 6788888865 46899999883
No 201
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.89 E-value=2e-05 Score=74.09 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=51.5
Q ss_pred CCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 63 ~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.|++|..|.+||+|+++| |++||.|++|||+.+.+ .++..++|+.. +..+.|+|.|.
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~---~~~v~l~v~R~ 442 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEK---KKELLVQVLRG 442 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSS---CSCEEEEEEET
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcC---CCeEEEEEEEC
Confidence 589999999999999999 99999999999999975 68899999875 77899999873
No 202
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.88 E-value=3e-05 Score=70.26 Aligned_cols=59 Identities=22% Similarity=0.371 Sum_probs=50.6
Q ss_pred CCEEEEeecCCChhhhcCCCCC-----------CCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 63 GGIYVGSIMKGGAVALDGRIEP-----------GDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 63 ~gi~I~~V~~Gg~A~~~G~L~~-----------GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.|++|..|.++|||+++| |++ ||.|++|||+.+.++ ++....|... ..+..|+|+|.|.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~-~~g~~v~l~v~R~ 320 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQC-KVGDEVTVEVLRG 320 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTC-CTTCEEEEEEECS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhC-CCcCEEEEEEEEC
Confidence 699999999999999999 998 999999999999864 6788888653 1267899999984
No 203
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.58 E-value=0.00016 Score=73.27 Aligned_cols=72 Identities=14% Similarity=0.081 Sum_probs=60.1
Q ss_pred CCCCcccEEEEcccCCCCCCCEEEEeecCC--------ChhhhcC-CCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 44 DTVNFLGISIVGQSNKGGDGGIYVGSIMKG--------GAVALDG-RIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 44 ~~~~~LG~sI~gg~~~~~~~gi~I~~V~~G--------g~A~~~G-~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
....++|+.+.-. +.+++|..|.+| |||+++| .|+ ||+|++|||+.+.++. +++.+|+.. .
T Consensus 734 ~~~~g~G~~~~~~-----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~--~ 803 (1045)
T 1k32_A 734 FRSGRIACDFKLD-----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEK--A 803 (1045)
T ss_dssp CCCCBCSEEEEEE-----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTT--T
T ss_pred cccceecEEEEEe-----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCC--C
Confidence 3346899988752 578999999998 9999999 489 9999999999999876 778888875 3
Q ss_pred CCcEEEEEEec
Q psy1022 115 PGPIKLVVAKC 125 (245)
Q Consensus 115 ~~~V~L~V~r~ 125 (245)
+..|+|+|.+.
T Consensus 804 g~~v~l~v~r~ 814 (1045)
T 1k32_A 804 GTSARIRLSGK 814 (1045)
T ss_dssp TSEEEEEEECS
T ss_pred CCEEEEEEECC
Confidence 67899999874
No 204
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.58 E-value=9.9e-06 Score=76.10 Aligned_cols=68 Identities=25% Similarity=0.411 Sum_probs=0.0
Q ss_pred ccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 49 LGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 49 LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
+|+.+..-. ...+++|..|.+|++|++.| |++||.|++|||+.+.+ .++..++|+.. .+.+.|+|.|.
T Consensus 372 ~G~~l~~~~---~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~---~~~v~l~v~R~ 439 (448)
T 1ky9_A 372 EGAEMSNKG---KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSK---PSVLALNIQRG 439 (448)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred cceEeeccC---CCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcC---CCeEEEEEEEC
Confidence 466654321 25689999999999999999 99999999999999984 77888888875 56888888873
No 205
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.42 E-value=2.1e-05 Score=70.70 Aligned_cols=57 Identities=16% Similarity=0.394 Sum_probs=0.0
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|++|..|.+||||+++| |++||.|++|||+.+.+ .++....|+. +..++|+|.|.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~----~~~v~l~v~R~ 309 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR----ESTLNMVVRRG 309 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC----CCeEEEEEEEC
Confidence 3689999999999999999 99999999999999964 5667777764 56799999884
No 206
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.36 E-value=0.00011 Score=68.97 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=49.6
Q ss_pred CCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEEEec
Q psy1022 63 GGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 63 ~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
.+++|..|.+||||+++| |++||.|++|||..+.++ .+...+|.... .+..|+|+|.|.
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~-~g~~v~l~v~R~ 344 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMP-VGSKLTLGLLRD 344 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSB-TTCCCEEEEESS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcC-CCCEEEEEEEEC
Confidence 589999999999999998 999999999999999875 56677776421 267899999874
No 207
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.86 E-value=0.0021 Score=61.70 Aligned_cols=61 Identities=10% Similarity=0.173 Sum_probs=45.6
Q ss_pred CCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCH--------HHHHHHHHhccCCCCcEEEEEEec
Q psy1022 62 DGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSN--------DEAVRVLREVVQKPGPIKLVVAKC 125 (245)
Q Consensus 62 ~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~--------~eav~~Lr~~~~~~~~V~L~V~r~ 125 (245)
..|++|..|.+||||++ + |++||.|++|||+.+..... .....++... ..+..|+|+|.|.
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~-~~Gd~v~l~v~R~ 344 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQK-FAGDIAEIGIIRA 344 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTS-CTTCEEEEEEEET
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcC-CCCCEEEEEEEEC
Confidence 47999999999999986 5 99999999999999965321 1123344432 2377899999984
No 208
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.26 E-value=0.011 Score=56.84 Aligned_cols=57 Identities=9% Similarity=0.071 Sum_probs=48.4
Q ss_pred CCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCCCCcEEEEE
Q psy1022 61 GDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQKPGPIKLVV 122 (245)
Q Consensus 61 ~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~~~~V~L~V 122 (245)
+..+++|+.|.++++|+..| ++.||.|++|||+.+.+ .++..++|++++ ...+.|.+
T Consensus 413 ~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s--~~~l~~~l~~~k--~~~l~~~~ 469 (539)
T 4fln_A 413 GEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRN--IHHLAHLIDMCK--DKYLVFEF 469 (539)
T ss_dssp TCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCS--HHHHHHHHHTCC--SSEEEEEE
T ss_pred CceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCC--HHHHHHHHHHcC--CCeEEEEE
Confidence 35789999999999999988 99999999999999986 788999999883 44555544
No 209
>2op5_A Hypothetical protein; ferredoxin-like protein, structural genomics, joint center F structural genomics, JCSG; 2.20A {Uncultured marine organism} SCOP: d.58.4.22
Probab=70.43 E-value=2.7 Score=30.43 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=21.7
Q ss_pred HHHHHHhhccceeecccccccccceee
Q psy1022 210 KYASQMLKFGYIRHTVNKITFSEQCYY 236 (245)
Q Consensus 210 ~~a~~~l~~~~i~h~~~k~~f~e~cyy 236 (245)
.+-+.|-.+|+|||++.|+---||-..
T Consensus 38 dlysrlsaaglirhviskvwnkeqhri 64 (117)
T 2op5_A 38 DLYSRLSAAGLIRHVISKVWNKEQHRI 64 (117)
T ss_dssp HHHHHHHHHTEEEEEEEEECCTTCCEE
T ss_pred HHHHHHHHhhHHHHHHHHHhhhhhcee
Confidence 345778899999999999987777653
No 210
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=61.30 E-value=4.1 Score=28.36 Aligned_cols=28 Identities=25% Similarity=0.591 Sum_probs=21.3
Q ss_pred hhhhhhhcccchhh-----------HHHHHHHHHHhhcc
Q psy1022 192 VDWLDKHVEGFTDR-----------REARKYASQMLKFG 219 (245)
Q Consensus 192 v~wl~~~v~g~~~r-----------~~a~~~a~~~l~~~ 219 (245)
-+||++.+||..+. -.-|+||.+||+..
T Consensus 31 Ke~LLqSIEgmik~aA~~vLRnP~~~kLr~~an~Ll~LK 69 (76)
T 2rp4_A 31 KEWLLQSIEGMIKEAAAEVLRNPNQENLRRHANKLLSLK 69 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 47999999996643 34588999888753
No 211
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=56.40 E-value=14 Score=35.62 Aligned_cols=42 Identities=26% Similarity=0.472 Sum_probs=29.4
Q ss_pred cccEEEEcccCCCCCCCEEEEeecCCChhhhcCCCCCCCEEEeeCCeeccc
Q psy1022 48 FLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRIEPGDMILQVNDINFEN 98 (245)
Q Consensus 48 ~LG~sI~gg~~~~~~~gi~I~~V~~Gg~A~~~G~L~~GD~Il~VNg~~l~~ 98 (245)
.+||.+.-. .++.+||..+..... .+.+||+|++|||+++..
T Consensus 85 ~~Pf~vki~----iDG~i~V~dv~~~~s-----~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 85 YLPYTVQKS----SDGRFYFVDIMTFSS-----EIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp ECSEEEEEC----TTSCEEEEEECSSCC-----SSCTTCEEEEETTEEHHH
T ss_pred cCCeEEEEE----ECCcEEEEecccccc-----CCCCCCEEEEECCccHHH
Confidence 467766622 256688877644332 399999999999999864
No 212
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=44.21 E-value=19 Score=23.93 Aligned_cols=28 Identities=11% Similarity=0.234 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHhhccceeecccccccccceeeeec
Q psy1022 205 RREARKYASQMLKFGYIRHTVNKITFSEQCYYIFG 239 (245)
Q Consensus 205 r~~a~~~a~~~l~~~~i~h~~~k~~f~e~cyy~~~ 239 (245)
|....+.-..|-+.|||.. ..++||..|
T Consensus 39 r~tv~~~l~~L~~~G~I~~-------~~~G~y~lg 66 (67)
T 2heo_A 39 KKTLNQVLYRLKKEDRVSS-------PSPKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHHHTTSEEE-------EETTEEEEC
T ss_pred HHHHHHHHHHHHHCCcEec-------CCCceEeeC
Confidence 7888888999999999854 336899887
No 213
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.04 E-value=43 Score=24.23 Aligned_cols=27 Identities=15% Similarity=0.297 Sum_probs=18.9
Q ss_pred cchhhhhhhhhcccchhhHHHHHHHHHHhhccc
Q psy1022 188 SADVVDWLDKHVEGFTDRREARKYASQMLKFGY 220 (245)
Q Consensus 188 ~~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~ 220 (245)
..||..||... ||.+ .+|+..+.++++
T Consensus 32 ~~~V~~WL~~l--gl~~----~~y~~~F~~~~I 58 (103)
T 2e8o_A 32 PEQVCSFLRRG--GFEE----PVLLKNIRENEI 58 (103)
T ss_dssp HHHHHHHHHHH--TCCC----HHHHHHHHHTTC
T ss_pred HHHHHHHHHHc--CCCh----HHHHHHHHHcCC
Confidence 37899999865 8865 367777766553
No 214
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=39.44 E-value=11 Score=26.62 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=15.5
Q ss_pred eccccc-ccccceeeeecccc
Q psy1022 223 HTVNKI-TFSEQCYYIFGDLL 242 (245)
Q Consensus 223 h~~~k~-~f~e~cyy~~~~~~ 242 (245)
=||-|+ ++.|+|+..|+|..
T Consensus 45 GTI~kV~~~~e~ClV~F~D~S 65 (79)
T 2m0o_A 45 GTIKKVDSAREVCLVQFEDDS 65 (79)
T ss_dssp EEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEeccCCCEEEEEEcCCC
Confidence 455555 67999999999974
No 215
>2k13_X Saratin; collagen binding, mixed alpha/beta structure, fold typical for PAN domains, toxin; NMR {Haementeria officinalis}
Probab=34.73 E-value=11 Score=26.58 Aligned_cols=12 Identities=42% Similarity=1.013 Sum_probs=9.8
Q ss_pred ccceeeeecccc
Q psy1022 231 SEQCYYIFGDLL 242 (245)
Q Consensus 231 ~e~cyy~~~~~~ 242 (245)
+|-||+||-|..
T Consensus 38 teycyivfedtv 49 (103)
T 2k13_X 38 TEYCYIVFEDTV 49 (103)
T ss_dssp SSCCCEEEEETT
T ss_pred cceEEEEEeccc
Confidence 788999998853
No 216
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=33.90 E-value=22 Score=22.91 Aligned_cols=15 Identities=33% Similarity=0.674 Sum_probs=13.0
Q ss_pred hhhHHHHHHHHHHhh
Q psy1022 203 TDRREARKYASQMLK 217 (245)
Q Consensus 203 ~~r~~a~~~a~~~l~ 217 (245)
...+||.|||.-|+|
T Consensus 11 rtkkeaekfaailik 25 (62)
T 2gjh_A 11 RTKKEAEKFAAILIK 25 (62)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHH
Confidence 357999999999987
No 217
>1kn6_A Prohormone convertase 1; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Mus musculus} SCOP: d.58.3.3
Probab=31.62 E-value=34 Score=24.56 Aligned_cols=39 Identities=23% Similarity=0.413 Sum_probs=26.4
Q ss_pred hhhhhhhcccchhhHHHHHHHHHHhhccceeecccccccccceeeeec
Q psy1022 192 VDWLDKHVEGFTDRREARKYASQMLKFGYIRHTVNKITFSEQCYYIFG 239 (245)
Q Consensus 192 v~wl~~~v~g~~~r~~a~~~a~~~l~~~~i~h~~~k~~f~e~cyy~~~ 239 (245)
+.|+.+= + .+..+|...|. |+||+. ..+|-+.+. ||.|=
T Consensus 13 n~waV~i-~--~g~~~A~~iA~---k~GF~n--lGqIg~l~~-~YhF~ 51 (90)
T 1kn6_A 13 NEWAAEI-P--GGQEAASAIAE---ELGYDL--LGQIGSLEN-HYLFK 51 (90)
T ss_dssp CCEEEEC-S--STHHHHHHHHH---HHTCEE--CCCCSSSSC-EEEEE
T ss_pred eeEEEEc-c--CcHHHHHHHHH---HcCcEE--eccCCCCCC-EEEEE
Confidence 4565533 2 23468999998 899984 467776765 88873
No 218
>1n13_B PVLARGDC, pyruvoyl-dependent arginine decarboxylase alpha chain; pyruvoyl group, pyruvate, agmatine, lyase; 1.40A {Methanocaldococcus jannaschii} SCOP: d.155.1.2 PDB: 1mt1_B 2qqd_B 2qqc_B
Probab=30.71 E-value=20 Score=27.04 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=21.9
Q ss_pred hhhhhcccchhhHHHHHHHHHHhhccc
Q psy1022 194 WLDKHVEGFTDRREARKYASQMLKFGY 220 (245)
Q Consensus 194 wl~~~v~g~~~r~~a~~~a~~~l~~~~ 220 (245)
-+++| +|+.+..+|+++|..||+.+|
T Consensus 54 ~i~E~-~g~~~~eeae~~a~~ml~~~~ 79 (113)
T 1n13_B 54 LIMEY-EGKCSKKEAEKTVREMAKIGF 79 (113)
T ss_dssp EEEEE-EESSCHHHHHHHHHHHHHHHH
T ss_pred EEEEe-ecCCChHHHHHHHHHHHHHHH
Confidence 34554 889889999999999999995
No 219
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=29.19 E-value=48 Score=23.39 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=25.8
Q ss_pred hhhHHHHHHHHHHhhccceeecccccccccceeeeeccc
Q psy1022 203 TDRREARKYASQMLKFGYIRHTVNKITFSEQCYYIFGDL 241 (245)
Q Consensus 203 ~~r~~a~~~a~~~l~~~~i~h~~~k~~f~e~cyy~~~~~ 241 (245)
-|++|--|.-..|-|.|.|-= -..|||..|+-
T Consensus 46 vdKKeVdKaik~LKkEgkI~S-------PkRCyw~~~~~ 77 (80)
T 2lnb_A 46 APKRELNQVLYRMKKELKVSL-------TSPATWCLGGT 77 (80)
T ss_dssp SCHHHHHHHHHHHHHTTSEEE-------EETTEEEESSS
T ss_pred CCHHHHHHHHHHHHHcCCccC-------CCCceeeCCCC
Confidence 378888899999999998743 36899999863
No 220
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=26.24 E-value=39 Score=26.91 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=29.5
Q ss_pred CChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC-CCcEEEEEE
Q psy1022 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK-PGPIKLVVA 123 (245)
Q Consensus 73 Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~-~~~V~L~V~ 123 (245)
|.|..-..++++|..|++|.|++.. .|.+.|+.+..+ +....+++.
T Consensus 106 G~p~~wvArVk~G~ilfei~gv~~~-----~A~eAlr~A~~KlP~ktkiv~~ 152 (157)
T 1ffk_F 106 GKSVGTAARSHGANHDFIAWVNPDP-----AVEFAWRRAYMKVTPTVNIDSS 152 (157)
T ss_pred CCccEEEEEEcCCCEEEEEeccCHH-----HHHHHHHHHHhhCCCcEEEEEe
Confidence 3444445569999999999887544 677777766433 334444443
No 221
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.96 E-value=29 Score=23.72 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=17.5
Q ss_pred ceeeccccc-ccccceeeeecccc
Q psy1022 220 YIRHTVNKI-TFSEQCYYIFGDLL 242 (245)
Q Consensus 220 ~i~h~~~k~-~f~e~cyy~~~~~~ 242 (245)
|.-=||-|+ ++.|.|+..|+|..
T Consensus 25 fYlGtV~kV~~~~~~ClV~FeD~s 48 (68)
T 2e5p_A 25 LYLGTIKKVDSAREVCLVQFEDDS 48 (68)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTE
T ss_pred EEEeEEEEEecCCcEEEEEEccCC
Confidence 344566676 78999999999964
No 222
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.64 E-value=34 Score=23.02 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=16.6
Q ss_pred eeeccccc-ccccceeeeecccc
Q psy1022 221 IRHTVNKI-TFSEQCYYIFGDLL 242 (245)
Q Consensus 221 i~h~~~k~-~f~e~cyy~~~~~~ 242 (245)
.=-||-|+ ++-|+|+..|+|..
T Consensus 24 YlgtV~kV~~~~~~ClV~FeD~s 46 (63)
T 2e5q_A 24 YLGKIKRVSSSKQSCLVTFEDNS 46 (63)
T ss_dssp EEEEECCCCSTTSEEEEEETTSC
T ss_pred EEEEEEEEecCCCEEEEEEccCc
Confidence 33566666 67799999999964
No 223
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=23.95 E-value=48 Score=25.63 Aligned_cols=34 Identities=15% Similarity=0.339 Sum_probs=24.2
Q ss_pred CChhhhcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 73 GGAVALDGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 73 Gg~A~~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
|.+..-..++.+|..|++|.|++ .+.|.+.|+.+
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv~-----~~~A~eAlr~a 121 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGVA-----ENIARRAVAIA 121 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSSC-----TTHHHHHHHHH
T ss_pred CCceEEEEEECCCCEEEEEecCC-----HHHHHHHHHHH
Confidence 45555566799999999999943 35566666655
No 224
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=23.11 E-value=39 Score=22.74 Aligned_cols=23 Identities=17% Similarity=0.449 Sum_probs=20.3
Q ss_pred hcccchhhHHHHHHHHHHhhccc
Q psy1022 198 HVEGFTDRREARKYASQMLKFGY 220 (245)
Q Consensus 198 ~v~g~~~r~~a~~~a~~~l~~~~ 220 (245)
.|..|.+|.+|.+....|-+.||
T Consensus 49 ~vGpf~~~~~A~~~~~~L~~~g~ 71 (79)
T 1x60_A 49 QIGAFSSKDNADTLAARAKNAGF 71 (79)
T ss_dssp EEEEESSHHHHHHHHHHHHHHTS
T ss_pred EECCcCCHHHHHHHHHHHHHcCC
Confidence 36779999999999999999886
No 225
>1t6l_A DNA polymerase processivity factor; processivity fold, replication; HET: DNA; 1.85A {Human herpesvirus 5} SCOP: d.131.1.2 d.131.1.2 PDB: 1yyp_A*
Probab=22.49 E-value=23 Score=30.20 Aligned_cols=16 Identities=56% Similarity=1.018 Sum_probs=14.9
Q ss_pred ecccccccccceeeee
Q psy1022 223 HTVNKITFSEQCYYIF 238 (245)
Q Consensus 223 h~~~k~~f~e~cyy~~ 238 (245)
|-|.||||--.|-||-
T Consensus 56 ~~V~KitfnssCLyit 71 (290)
T 1t6l_A 56 HCVSKITFNSSCLYIT 71 (290)
T ss_dssp TEEEEEEECGGGEEES
T ss_pred hheeEEEecceEEEEe
Confidence 8899999999999984
No 226
>3agt_A Hemerythrin-like domain protein DCRH; metal binding protein, oxygen binding, DIIRON, four-helix BU; 1.40A {Desulfovibrio vulgaris} PDB: 2awy_A 2avk_A 3agu_A 2awc_A
Probab=21.59 E-value=40 Score=25.37 Aligned_cols=27 Identities=33% Similarity=0.612 Sum_probs=18.2
Q ss_pred chhhhhhhhhcccchhhHHHHHHHHHHhhccc
Q psy1022 189 ADVVDWLDKHVEGFTDRREARKYASQMLKFGY 220 (245)
Q Consensus 189 ~d~v~wl~~~v~g~~~r~~a~~~a~~~l~~~~ 220 (245)
.-+.+||..|+-+. | ++||..|-+.|+
T Consensus 109 ~~L~~Wl~~HI~~~-D----~~~~~~l~~~~~ 135 (136)
T 3agt_A 109 RGLVDWLVNHIMKE-D----KKYEAYLRERGV 135 (136)
T ss_dssp HHHHHHHHHHHHHT-T----HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhHHH-h----HHHHHHHHHcCC
Confidence 34788999998753 2 457776666553
No 227
>2klq_A CBD, P105MCM, DNA replication licensing factor MCM6; PRE-RC, CDT1, CBD structure, ATP-BIND cycle, DNA-binding, nucleotide-binding, nucleus; HET: DNA; NMR {Homo sapiens}
Probab=21.15 E-value=58 Score=24.28 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=25.7
Q ss_pred cchhhhhhhhhccc--------chhhHHHHHHHHHHhh-ccce
Q psy1022 188 SADVVDWLDKHVEG--------FTDRREARKYASQMLK-FGYI 221 (245)
Q Consensus 188 ~~d~v~wl~~~v~g--------~~~r~~a~~~a~~~l~-~~~i 221 (245)
++||++|-.+-++. ..+|+-++|.-..|++ .|++
T Consensus 38 ~~eLv~WYLeq~e~~i~seeel~~e~~lv~kVI~rLI~~D~iL 80 (114)
T 2klq_A 38 RSELVNWYLKEIESEIDSEEELINKKRIIEKVIHRLTHYDHVL 80 (114)
T ss_dssp HHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhCCEE
Confidence 58999995555543 4568889999999999 6654
No 228
>1uku_A CUTA1, periplasmic divalent cation tolerance protein CUT; copper tolerance, structural genomics, metal binding P; 1.45A {Pyrococcus horikoshii} SCOP: d.58.5.2 PDB: 1umj_A 1v99_A* 1v9b_A 1j2v_A 2e66_A
Probab=20.80 E-value=50 Score=24.18 Aligned_cols=26 Identities=31% Similarity=0.300 Sum_probs=20.6
Q ss_pred chhhHHHHHHHHHHhhccceeeccccc
Q psy1022 202 FTDRREARKYASQMLKFGYIRHTVNKI 228 (245)
Q Consensus 202 ~~~r~~a~~~a~~~l~~~~i~h~~~k~ 228 (245)
+-|+.+|++.|..||+.+++- -||=+
T Consensus 8 ~p~~~~A~~ia~~Lve~rLAA-Cvni~ 33 (102)
T 1uku_A 8 FPDWESAEKVVKTLLKERLIA-CANLR 33 (102)
T ss_dssp ESSHHHHHHHHHHHHHTTSCS-EEEEE
T ss_pred cCCHHHHHHHHHHHHHCCeEE-EEEec
Confidence 357889999999999999883 45543
No 229
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=20.65 E-value=58 Score=25.21 Aligned_cols=32 Identities=16% Similarity=0.370 Sum_probs=24.5
Q ss_pred hcCCCCCCCEEEeeCCeecccCCHHHHHHHHHhccCC
Q psy1022 78 LDGRIEPGDMILQVNDINFENMSNDEAVRVLREVVQK 114 (245)
Q Consensus 78 ~~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~~~~ 114 (245)
-..++.+|..|++|.|+ +.+.|.+.|+.+..+
T Consensus 92 wva~Vk~G~ilfEi~g~-----~~~~A~eAlr~a~~K 123 (136)
T 3r8s_M 92 WVALIQPGKVLYEMDGV-----PEELAREAFKLAAAK 123 (136)
T ss_dssp EEEEECTTCEEEEEESS-----CHHHHHHHHHHHHTT
T ss_pred EEEEECCCCEEEEEeCC-----CHHHHHHHHHHHHhc
Confidence 34468899999999984 577888888877443
No 230
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=20.64 E-value=1e+02 Score=25.77 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.4
Q ss_pred cCCCCCCCEEEeeCCeecccCCHHHHHHHHHhc
Q psy1022 79 DGRIEPGDMILQVNDINFENMSNDEAVRVLREV 111 (245)
Q Consensus 79 ~G~L~~GD~Il~VNg~~l~~~t~~eav~~Lr~~ 111 (245)
.|.+..|+.++-|.++--+|-|..+++++|++.
T Consensus 131 ~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~ 163 (234)
T 3m3h_A 131 EGKAEKGQKVVVVEDLISTGGSAITCVEALREA 163 (234)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred ecccCCCCEEEEEecccchhHHHHHHHHHHHHC
Confidence 355789999999999999999999999999997
No 231
>1nza_A CUTA, divalent cation tolerance protein; cellular tolerance, monomer, structural genomics, RIKE structural genomics/proteomics initiative; 1.70A {Thermus thermophilus} SCOP: d.58.5.2 PDB: 1v6h_A
Probab=20.54 E-value=51 Score=24.20 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=18.2
Q ss_pred chhhHHHHHHHHHHhhcccee
Q psy1022 202 FTDRREARKYASQMLKFGYIR 222 (245)
Q Consensus 202 ~~~r~~a~~~a~~~l~~~~i~ 222 (245)
+-|+.+|++.|..||+.+++-
T Consensus 9 ~p~~~~A~~ia~~Lve~rLAA 29 (103)
T 1nza_A 9 VPSEEVARTIAKALVEERLAA 29 (103)
T ss_dssp ESSHHHHHHHHHHHHHTTSCS
T ss_pred cCCHHHHHHHHHHHHHCCeEE
Confidence 357889999999999999873
No 232
>3ahp_A CUTA1; thermostable protein, electron transport; 2.70A {Shewanella}
Probab=20.12 E-value=52 Score=24.36 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=20.5
Q ss_pred chhhHHHHHHHHHHhhccceeecccc
Q psy1022 202 FTDRREARKYASQMLKFGYIRHTVNK 227 (245)
Q Consensus 202 ~~~r~~a~~~a~~~l~~~~i~h~~~k 227 (245)
+-|+.+|++.|..||+.+++ .-||=
T Consensus 13 ~p~~~~A~~ia~~Lve~rLA-ACvni 37 (108)
T 3ahp_A 13 CPDADIACRIATALVEAKLA-ACVQI 37 (108)
T ss_dssp ESSHHHHHHHHHHHHHTTSC-SEEEE
T ss_pred cCCHHHHHHHHHHHHhCCeE-EEEEe
Confidence 45789999999999999988 45553
No 233
>1vhf_A Periplasmic divalent cation tolerance protein; structural genomics, unknown function; 1.54A {Thermotoga maritima} SCOP: d.58.5.2
Probab=20.08 E-value=52 Score=24.62 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=20.0
Q ss_pred chhhHHHHHHHHHHhhccceeecccc
Q psy1022 202 FTDRREARKYASQMLKFGYIRHTVNK 227 (245)
Q Consensus 202 ~~~r~~a~~~a~~~l~~~~i~h~~~k 227 (245)
+-|+.+|++.|..||+.+++- -||=
T Consensus 10 ~p~~e~A~~iA~~Lve~rLAA-Cvni 34 (113)
T 1vhf_A 10 FPNEEKALEIGRKLLEKRLIA-CFNA 34 (113)
T ss_dssp ESSHHHHHHHHHHHHHTTSCS-EEEE
T ss_pred cCCHHHHHHHHHHHHHCCeEE-EEEE
Confidence 457889999999999999873 4443
Done!