BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10221
(67 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 52/61 (85%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE R C ACGE I+DK+LL+VS +SWHA+CLRCC+CQL LDR PSCFI+D A+YCK DYA
Sbjct: 78 TEYRLCSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADYA 137
Query: 67 K 67
K
Sbjct: 138 K 138
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 52/61 (85%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE R C ACGE I+DK+LL+VS +SWHA+CLRCC+CQL LDR PSCFI+D A+YCK DYA
Sbjct: 64 TEYRLCSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADYA 123
Query: 67 K 67
K
Sbjct: 124 K 124
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 2 FKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYC 61
F T TE R C ACGE I D++LL+V +WH CLRCC+C + LDRHPSCF++D VYC
Sbjct: 128 FSTSGTEHRTCCACGEPIADRFLLEVGGGAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYC 187
Query: 62 KQDYAK 67
KQDYAK
Sbjct: 188 KQDYAK 193
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TE R C ACGE I D++LL+V +WH CLRCC+C + LDRHPSCF++D VYCKQD
Sbjct: 1 MKTEHRTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQD 60
Query: 65 YAK 67
YAK
Sbjct: 61 YAK 63
>gi|346223350|dbj|BAK78926.1| arrowhead PB [Bombyx mori]
Length = 105
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE R C ACGE I D++LL+V +WH CLRCC+C + LDRHPSCF++D VYCKQDYA
Sbjct: 3 TEHRTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYA 62
Query: 67 K 67
Sbjct: 63 N 63
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TE C C + ITD++LL+VSDK WH CLRCC+C LVL+ PSCFIKD+++YC+QD
Sbjct: 54 VKTESLQCRGCSDPITDRFLLKVSDKIWHVSCLRCCVCNLVLEDEPSCFIKDDSIYCRQD 113
Query: 65 YAK 67
YA+
Sbjct: 114 YAR 116
>gi|312371800|gb|EFR19896.1| hypothetical protein AND_21634 [Anopheles darlingi]
Length = 295
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
ELR C ACGE I+DK+LL V SWH+ CLRCCIC LD+ PSC+++D +YCK DYAK
Sbjct: 236 ELRSCTACGEPISDKFLLDVGGCSWHSACLRCCICHTPLDQQPSCYVRDRQIYCKTDYAK 295
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 43/60 (71%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
ELR C ACGE I+DKYLL V SWH+ CLRCCIC LD PSCF++D +YCK DY K
Sbjct: 4 ELRSCTACGEPISDKYLLDVGGCSWHSACLRCCICHNPLDHQPSCFLRDRQIYCKNDYTK 63
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 44/59 (74%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
ELR C ACGE I+D+YLL V SWH+ CLRCCIC LD+ PSCF++D +YCK DYA
Sbjct: 6 ELRSCTACGEPISDQYLLDVGGCSWHSACLRCCICHTPLDQQPSCFLRDRQIYCKADYA 64
>gi|170034030|ref|XP_001844878.1| arrowhead [Culex quinquefasciatus]
gi|167875286|gb|EDS38669.1| arrowhead [Culex quinquefasciatus]
Length = 169
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
M + I TELR CVACGE I DKYL V SWH CLRC +C +L+R PSC+ +D VY
Sbjct: 103 MMRKIKTELRTCVACGEPIADKYLFDVDGCSWHGSCLRCSVCLTLLERQPSCYFRDRQVY 162
Query: 61 CKQDYAK 67
C+ DYAK
Sbjct: 163 CRTDYAK 169
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
++TELR CVACGE I DKYL V SWH CLRC +C +L+R PSC+ +D VYC+ D
Sbjct: 16 LVTELRTCVACGEPIADKYLFDVDGCSWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRTD 75
Query: 65 YAK 67
YAK
Sbjct: 76 YAK 78
>gi|241174222|ref|XP_002410980.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215495067|gb|EEC04708.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 62
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+TE C ACGE I D++LL+VSD SWHA+CLRCC+CQ LD PSCF++ +VYC+ DY
Sbjct: 1 MTEQEACSACGELIADRFLLKVSDTSWHARCLRCCVCQTPLDHQPSCFVRHGSVYCRPDY 60
Query: 66 AK 67
+
Sbjct: 61 VR 62
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 42/61 (68%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TELR C ACGE I DKYL V SWH CLRC +C +L+R PSC+ +D VYC+ DYA
Sbjct: 17 TELRTCTACGEPIADKYLFDVDGCSWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRSDYA 76
Query: 67 K 67
K
Sbjct: 77 K 77
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
ELR C ACGE I+D++LL V SWH+ CLRCCIC LD PSCF+++ +YCK DY K
Sbjct: 19 ELRSCTACGEPISDQFLLDVGGCSWHSACLRCCICHTPLDHQPSCFLRERQIYCKTDYTK 78
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SC+I++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCYIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>gi|158296015|ref|XP_316574.4| AGAP006536-PA [Anopheles gambiae str. PEST]
gi|157016309|gb|EAA11386.5| AGAP006536-PA [Anopheles gambiae str. PEST]
Length = 291
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TELR C ACGE I DKYL + +WH CLRC +C +L+R PSC+ +D VYC+ DY
Sbjct: 31 TELRICTACGEPIADKYLFDIDGCAWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRTDYI 90
Query: 67 K 67
K
Sbjct: 91 K 91
>gi|312385469|gb|EFR29961.1| hypothetical protein AND_00756 [Anopheles darlingi]
Length = 344
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TELR C ACGE I DKYL + +WH CLRC +C +L+R PSC+ +D VYC+ DYA
Sbjct: 8 TELRICTACGEPIADKYLFDIDGCAWHGSCLRCSVCLTLLERQPSCYFRDRHVYCRADYA 67
Query: 67 K 67
Sbjct: 68 N 68
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C ACGE ITD++L+QVS ++WH+ CLRC +C+ LD PSCF++ A+YC+ DY +
Sbjct: 1 CAACGELITDRFLIQVSGRTWHSTCLRCSVCRTALDNQPSCFVRAGAIYCRADYTR 56
>gi|225709660|gb|ACO10676.1| LIM/homeobox protein Awh [Caligus rogercresseyi]
Length = 274
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y+LQV+ +SWH+ CLRC +CQ +LD H SCFIKD+ ++CK DYA+
Sbjct: 25 CSDCGAGITDQYILQVAGQSWHSSCLRCSVCQEILDSHSSCFIKDDLLFCKLDYAR 80
>gi|242003798|ref|XP_002422864.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
gi|212505746|gb|EEB10126.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
Length = 227
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPS 51
+ TE CVACG++ITDKYLLQV+ +SWH+ CLRC +CQL LDRHPS
Sbjct: 3 VCTEHSICVACGDAITDKYLLQVNGRSWHSHCLRCSVCQLALDRHPS 49
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
T ITE + C C E ITD+Y+ +V+ SWH CLRC +C L+R SCF++D VYCK
Sbjct: 66 TGITEYKACGGCSEQITDRYIFEVNGASWHGSCLRCSVCYCPLERQASCFLRDGDVYCKA 125
Query: 64 DYAK 67
DY K
Sbjct: 126 DYIK 129
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ IT+++LL V+ ++WH CLRCCICQ+ L+R SCFI+++ +YC+ DY++
Sbjct: 45 CYGCGDLITERFLLHVNGQAWHVGCLRCCICQIGLERQTSCFIREDNIYCRNDYSR 100
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I ++ LQV + SWH CLRCC+C +L++ +CF +D VYCKQDYA+
Sbjct: 455 CGGCGQLILERVQLQVDNCSWHVDCLRCCVCDCLLEKDSTCFFRDNNVYCKQDYAR 510
>gi|345322211|ref|XP_003430546.1| PREDICTED: LIM/homeobox protein Lhx2-like [Ornithorhynchus
anatinus]
Length = 394
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 153 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 208
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 165 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 220
>gi|334321462|ref|XP_003340108.1| PREDICTED: LIM/homeobox protein Lhx8-like [Monodelphis domestica]
Length = 331
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V++ WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CSSCGLEIVDKYLLKVNELCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|126306413|ref|XP_001367734.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Monodelphis
domestica]
gi|395531043|ref|XP_003767592.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sarcophilus
harrisii]
Length = 388
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|224493106|sp|A2PZF9.1|LHX9_RANRU RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|124377598|dbj|BAF46216.1| LIM homeobox gene 9 alpha protein [Glandirana rugosa]
Length = 379
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 108
>gi|291402696|ref|XP_002717724.1| PREDICTED: LIM homeobox protein 9-like isoform 2 [Oryctolagus
cuniculus]
Length = 388
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|296230329|ref|XP_002760660.1| PREDICTED: LIM/homeobox protein Lhx9 [Callithrix jacchus]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|149743835|ref|XP_001492921.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Equus caballus]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|62241033|ref|NP_001014434.1| LIM/homeobox protein Lhx9 isoform 2 [Homo sapiens]
gi|114571650|ref|XP_525011.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 6 [Pan troglodytes]
gi|297281170|ref|XP_001110674.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Macaca mulatta]
gi|395729258|ref|XP_002809704.2| PREDICTED: LIM/homeobox protein Lhx9 [Pongo abelii]
gi|397505118|ref|XP_003823120.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan paniscus]
gi|402857736|ref|XP_003893401.1| PREDICTED: LIM/homeobox protein Lhx9 [Papio anubis]
gi|426333155|ref|XP_004028150.1| PREDICTED: LIM/homeobox protein Lhx9 [Gorilla gorilla gorilla]
gi|9367761|emb|CAB97493.1| LIM-homeobox 9 [Homo sapiens]
gi|119611697|gb|EAW91291.1| LIM homeobox 9, isoform CRA_e [Homo sapiens]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|45382197|ref|NP_990757.1| LIM/homeobox protein Lhx9 [Gallus gallus]
gi|556038|gb|AAA50258.1| homeobox protein [Gallus gallus]
Length = 378
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|31077136|ref|NP_852032.1| LIM/homeobox protein Lhx9 [Rattus norvegicus]
gi|81895227|sp|Q80W90.1|LHX9_RAT RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|30525882|gb|AAP32472.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|410986202|ref|XP_003999401.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Felis catus]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|449268141|gb|EMC79011.1| LIM/homeobox protein Lhx9 [Columba livia]
Length = 378
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|348578262|ref|XP_003474902.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cavia
porcellus]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|344276912|ref|XP_003410249.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Loxodonta africana]
Length = 388
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|395531047|ref|XP_003767594.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Sarcophilus
harrisii]
Length = 380
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|311213854|ref|NP_001185656.1| LIM homeobox 9 [Taeniopygia guttata]
Length = 378
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|345803062|ref|XP_857156.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 4 [Canis lupus
familiaris]
Length = 380
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|119611694|gb|EAW91288.1| LIM homeobox 9, isoform CRA_b [Homo sapiens]
Length = 378
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|4530371|gb|AAD22008.1| LIM homeobox protein 9 [Mus musculus]
Length = 378
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|126306417|ref|XP_001367814.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Monodelphis
domestica]
Length = 380
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH QCL+CC C+L LD +CF KD ++YCK DY +
Sbjct: 59 CAGCGGRILDRYYLLAVDKQWHMQCLKCCECKLRLDSELTCFAKDGSIYCKDDYYR 114
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|410986204|ref|XP_003999402.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Felis catus]
Length = 380
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+F + TE + C C E ITD+Y+ +VS +WH CLRC IC L+R SC+ KD VY
Sbjct: 2 LFFPLQTEFKSCGGCAEQITDRYIFEVSGCAWHGSCLRCSICYCSLERQVSCYFKDGEVY 61
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 62 CKTDYIK 68
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|117306370|gb|AAI26705.1| LHX9 protein [Bos taurus]
Length = 388
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|6180221|emb|CAB59908.1| putative LIM homeodomain protein [Mus musculus]
Length = 366
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 95
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 127
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 128
>gi|335296201|ref|XP_003357709.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sus scrofa]
Length = 388
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYYR 128
>gi|344276910|ref|XP_003410248.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Loxodonta africana]
Length = 380
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|66792874|ref|NP_001019715.1| LIM/homeobox protein Lhx9 [Bos taurus]
gi|61555226|gb|AAX46681.1| LIM homeobox 9 [Bos taurus]
gi|296478851|tpg|DAA20966.1| TPA: LIM/homeobox protein Lhx9 [Bos taurus]
Length = 378
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 180 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 235
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 161 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 214
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CLRCC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGRKIVDRYYLLAVDKQWHMRCLRCCECKLHLESELTCFSKDGSIYCKEDYYR 108
>gi|281354175|gb|EFB29759.1| hypothetical protein PANDA_007956 [Ailuropoda melanoleuca]
Length = 382
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|345306379|ref|XP_001506055.2| PREDICTED: LIM/homeobox protein Lhx9-like [Ornithorhynchus
anatinus]
Length = 303
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 76 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 131
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 303 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 356
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+TE C +CG I DKYLL+V+D WH +CL C +CQ L RH SC+IK++ ++CK DY
Sbjct: 45 MTEKAICTSCGTEIVDKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDY 104
>gi|355567447|gb|EHH23788.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH CL+CC C+L L+ +CF KD ++YCKQDY +
Sbjct: 60 CAGCGGRIVDRYYLLAVDKQWHLHCLKCCECKLRLESELTCFAKDGSIYCKQDYYR 115
>gi|6754538|ref|NP_034840.1| LIM/homeobox protein Lhx2 [Mus musculus]
gi|157817308|ref|NP_001100041.1| LIM/homeobox protein Lhx2 [Rattus norvegicus]
gi|8134552|sp|Q9Z0S2.1|LHX2_MOUSE RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|4406516|gb|AAD20012.1| LIM-homeodomain protein MLHX2 [Mus musculus]
gi|26343551|dbj|BAC35432.1| unnamed protein product [Mus musculus]
gi|33416474|gb|AAH55741.1| LIM homeobox protein 2 [Mus musculus]
gi|149047902|gb|EDM00518.1| LIM homeobox protein 2 (predicted) [Rattus norvegicus]
Length = 406
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CGE ITD+Y LQ +++WHA CLRC C+L LD +C+ +D +++CK+DY +
Sbjct: 2 CAGCGEKITDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDYYR 57
>gi|426223060|ref|XP_004005697.1| PREDICTED: LIM/homeobox protein Lhx2 [Ovis aries]
Length = 404
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|133778048|gb|AAI27382.2| LIM homeobox 2 [Danio rerio]
gi|182888988|gb|AAI64490.1| Lhx2 protein [Danio rerio]
Length = 396
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|224471838|sp|A0JNI8.2|LHX9_BOVIN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|110665672|gb|ABG81482.1| LIM homeobox 9 [Bos taurus]
Length = 397
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|326924940|ref|XP_003208680.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Meleagris
gallopavo]
Length = 338
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 67
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C+ C I D+YLL+V +SWH +CLRCCICQ L SCF KD+ +YCK DY +
Sbjct: 22 CLGCTSPIQDRYLLKVGTRSWHVRCLRCCICQTGLGGQQSCFTKDDNIYCKMDYIR 77
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|354498706|ref|XP_003511455.1| PREDICTED: LIM/homeobox protein Lhx2-like [Cricetulus griseus]
Length = 475
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 126 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 181
>gi|301769257|ref|XP_002920045.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 2 [Ailuropoda
melanoleuca]
Length = 404
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 215 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 268
>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
Length = 517
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 3 KTIITELRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYC 61
K I CV CG +ITDK++L+V D WHA+CLRC C LD +CF+KD YC
Sbjct: 19 KRSIKSCSLCVGCGGAITDKFILRVQPDLEWHARCLRCVKCNRGLDEKNTCFVKDGKTYC 78
Query: 62 KQDYAK 67
K+DY K
Sbjct: 79 KEDYQK 84
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L+ C AC + Y+L V + +H C++C C +L ++ V C D+ +
Sbjct: 87 LQVCAACNRGLHKSDYVLHVGSRIYHISCMKCVACNRILQTGDEFALRPNGVICLHDHQR 146
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 54 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 109
>gi|348570106|ref|XP_003470838.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Cavia porcellus]
Length = 404
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|224073927|ref|XP_002191376.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Taeniopygia
guttata]
Length = 436
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 90 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 145
>gi|431898812|gb|ELK07182.1| LIM/homeobox protein Lhx2 [Pteropus alecto]
Length = 414
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|402896426|ref|XP_003911301.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Papio anubis]
Length = 414
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|297685312|ref|XP_002820236.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pongo abelii]
Length = 414
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|332229977|ref|XP_003264162.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Nomascus
leucogenys]
Length = 414
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|440908262|gb|ELR58305.1| LIM/homeobox protein Lhx2, partial [Bos grunniens mutus]
Length = 410
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 50 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 103
>gi|395824163|ref|XP_003785340.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Otolemur garnettii]
Length = 414
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
>gi|30795196|ref|NP_004780.3| LIM/homeobox protein Lhx2 [Homo sapiens]
gi|297685314|ref|XP_002820237.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pongo abelii]
gi|397473226|ref|XP_003808118.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pan paniscus]
gi|426362988|ref|XP_004048630.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Gorilla gorilla
gorilla]
gi|8247936|sp|P50458.2|LHX2_HUMAN RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|62739692|gb|AAH93662.1| LIM homeobox 2 [Homo sapiens]
gi|85567249|gb|AAI12186.1| LIM homeobox protein 2 [Homo sapiens]
gi|119607982|gb|EAW87576.1| LIM homeobox 2, isoform CRA_a [Homo sapiens]
gi|167773563|gb|ABZ92216.1| LIM homeobox 2 [synthetic construct]
gi|261859194|dbj|BAI46119.1| LIM homeobox 2 [synthetic construct]
Length = 406
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|547852|sp|P36198.1|LHX2_RAT RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
Length = 426
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|395824161|ref|XP_003785339.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Otolemur garnettii]
Length = 406
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|348570108|ref|XP_003470839.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Cavia porcellus]
Length = 406
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|291408369|ref|XP_002720520.1| PREDICTED: LIM homeobox protein 2-like [Oryctolagus cuniculus]
Length = 406
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|387763115|ref|NP_001248721.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
gi|402896424|ref|XP_003911300.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Papio anubis]
gi|380818036|gb|AFE80892.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|301769255|ref|XP_002920044.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345806102|ref|XP_863668.2| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Canis lupus
familiaris]
gi|281350174|gb|EFB25758.1| hypothetical protein PANDA_008723 [Ailuropoda melanoleuca]
Length = 406
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|403299862|ref|XP_003940693.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|281427312|ref|NP_001163990.1| LIM/homeobox protein Lhx2 [Sus scrofa]
gi|300794175|ref|NP_001178104.1| LIM/homeobox protein Lhx2 [Bos taurus]
gi|239937382|dbj|BAH79127.1| LIM homeobox protein 2 [Sus scrofa]
gi|296482193|tpg|DAA24308.1| TPA: LIM homeobox protein 2-like [Bos taurus]
Length = 406
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|332229975|ref|XP_003264161.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Nomascus
leucogenys]
Length = 406
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|9409734|emb|CAB98128.1| LIM-homeobox 9 [Homo sapiens]
Length = 257
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 13 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 68
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG+ I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 95 CASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 148
>gi|345806104|ref|XP_548461.3| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Canis lupus
familiaris]
Length = 397
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|115727487|ref|XP_782032.2| PREDICTED: LIM/homeobox protein Lhx9 [Strongylocentrotus
purpuratus]
Length = 474
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D++ L +D+ WH QCL+CC C + LD SCF K+ +YCK+DY K
Sbjct: 54 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLK 109
>gi|29570244|gb|AAO85392.1| LIM-homeobox protein 9 [Sus scrofa]
Length = 369
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|27923333|gb|AAO27570.1| LIM-homeodomain type transcription factor Lhx9 [Rattus
norvegicus]
Length = 325
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 95
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 129
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 191 CNSCGREIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 244
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 129
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|410979132|ref|XP_003995940.1| PREDICTED: LIM/homeobox protein Lhx2 [Felis catus]
Length = 484
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|339236177|ref|XP_003379643.1| LIM/homeobox protein Awh [Trichinella spiralis]
gi|316977684|gb|EFV60755.1| LIM/homeobox protein Awh [Trichinella spiralis]
Length = 902
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
KT+ C CG I D+YLLQV+ + WH CLRC C +LD+ PSC++K++ V+CK
Sbjct: 614 KTVNLTEEICSGCGNLIYDRYLLQVNQQFWHVNCLRCSSCTALLDKLPSCYLKEDKVFCK 673
Query: 63 QDYAK 67
Y +
Sbjct: 674 MCYQR 678
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 84 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 139
>gi|345321288|ref|XP_001521123.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Ornithorhynchus
anatinus]
Length = 347
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 74 CAGCGRKIVDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 129
>gi|395505659|ref|XP_003757157.1| PREDICTED: LIM/homeobox protein Lhx2 [Sarcophilus harrisii]
Length = 408
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|397473228|ref|XP_003808119.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pan paniscus]
gi|426362990|ref|XP_004048631.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Gorilla gorilla
gorilla]
gi|21753589|dbj|BAC04371.1| unnamed protein product [Homo sapiens]
gi|119607983|gb|EAW87577.1| LIM homeobox 2, isoform CRA_b [Homo sapiens]
Length = 397
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|403299864|ref|XP_003940694.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 397
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 89
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 67
>gi|508712|gb|AAB08752.1| LIM-homeobox domain protein [Homo sapiens]
Length = 423
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CGGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|348570110|ref|XP_003470840.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 3 [Cavia porcellus]
Length = 404
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|432095435|gb|ELK26634.1| LIM/homeobox protein Lhx2 [Myotis davidii]
Length = 389
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 91
>gi|344243883|gb|EGV99986.1| LIM/homeobox protein Lhx2 [Cricetulus griseus]
Length = 385
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 91
>gi|4406518|gb|AAD20013.1| LIM-homeodomain protein HLHX2 [Homo sapiens]
Length = 389
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 91
>gi|126306415|ref|XP_001367775.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Monodelphis
domestica]
gi|395531045|ref|XP_003767593.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sarcophilus
harrisii]
Length = 321
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+C CG I D+Y L DK WH CL+CC C++ LD +CF +D +YCK+DY +
Sbjct: 61 FCAGCGSRIFDRYYLMAVDKQWHVNCLKCCECKIGLDSELTCFARDGNIYCKEDYYR 117
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C + IT ++ +++ D +H C C C L ++D+ +YC+ DY
Sbjct: 121 VKRCTRCHQGITANELVMRAKDLVFHINCFTCASCNKTLTTGDQFGMQDDLIYCRTDY 178
>gi|6754542|ref|NP_034844.1| LIM/homeobox protein Lhx9 isoform b [Mus musculus]
gi|6179608|emb|CAB59907.1| putative LIM-homeodomain alpha isoform [Mus musculus]
gi|148707590|gb|EDL39537.1| LIM homeobox protein 9, isoform CRA_b [Mus musculus]
Length = 321
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|291402698|ref|XP_002717725.1| PREDICTED: LIM homeobox protein 9-like isoform 3 [Oryctolagus
cuniculus]
Length = 321
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|354485100|ref|XP_003504722.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cricetulus
griseus]
gi|118763751|gb|AAI28723.1| Lhx9 protein [Rattus norvegicus]
Length = 321
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|119611698|gb|EAW91292.1| LIM homeobox 9, isoform CRA_f [Homo sapiens]
Length = 321
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|241753309|ref|XP_002401118.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508343|gb|EEC17797.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 357
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C ACG I D++ L ++ WH CLRCC C+ LD +CF +D +YCK+DY
Sbjct: 36 KLCAACGAPIADRFYLLAVERQWHTHCLRCCHCKQQLDSELTCFARDGNIYCKEDY 91
>gi|348578264|ref|XP_003474903.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Cavia
porcellus]
Length = 321
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +C E I DKYLL+V+D WH +CL C +CQ L H SC+IK++ V+CK DY
Sbjct: 55 CASCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHTSCYIKEKEVFCKLDY 108
>gi|348535176|ref|XP_003455077.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oreochromis niloticus]
Length = 417
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 74 CAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 129
>gi|296190791|ref|XP_002743350.1| PREDICTED: LIM/homeobox protein Lhx2 [Callithrix jacchus]
Length = 365
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|114626624|ref|XP_528427.2| PREDICTED: LIM/homeobox protein Lhx2 [Pan troglodytes]
Length = 365
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|344271943|ref|XP_003407796.1| PREDICTED: LIM/homeobox protein Lhx2 [Loxodonta africana]
Length = 365
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|124377604|dbj|BAF46219.1| LIM homeobox gene 9 delta protein [Glandirana rugosa]
Length = 312
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 108
>gi|4809142|gb|AAD30110.1|AF134761_1 LIM-homeodomain type transcription factor Lhx9 [Mus musculus]
Length = 300
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
>gi|444707251|gb|ELW48535.1| LIM/homeobox protein Lhx2 [Tupaia chinensis]
Length = 442
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|395821904|ref|XP_003784270.1| PREDICTED: LIM/homeobox protein Lhx8 [Otolemur garnettii]
Length = 346
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|70909340|ref|NP_001020736.1| LIM/homeobox protein Lhx9 isoform a [Mus musculus]
gi|49119043|gb|AAH72623.1| LIM homeobox protein 9 [Mus musculus]
Length = 330
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>gi|170034024|ref|XP_001844875.1| arrowhead [Culex quinquefasciatus]
gi|167875283|gb|EDS38666.1| arrowhead [Culex quinquefasciatus]
Length = 257
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE + C C E ITD+Y+ +VS +WH CLRC +C L+R SC+ KD VYCK DY
Sbjct: 3 TEFKSCGGCSEQITDRYIFEVSGCAWHGACLRCSVCYCPLERQVSCYFKDGEVYCKTDYI 62
Query: 67 K 67
K
Sbjct: 63 K 63
>gi|368711326|ref|NP_001243043.1| LIM/homeobox protein Lhx8 isoform 2 [Homo sapiens]
gi|395730366|ref|XP_003775714.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pongo abelii]
gi|410033125|ref|XP_003949492.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pan troglodytes]
gi|426330050|ref|XP_004026039.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Gorilla gorilla
gorilla]
gi|441637563|ref|XP_004090066.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Nomascus
leucogenys]
Length = 346
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 128
>gi|338720511|ref|XP_001502198.3| PREDICTED: LIM/homeobox protein Lhx2-like [Equus caballus]
Length = 373
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 65
>gi|402854983|ref|XP_003892129.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Papio anubis]
Length = 346
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|123299964|dbj|BAF45328.1| LIM homeobox protein 2 [Sus scrofa]
Length = 373
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|344278994|ref|XP_003411276.1| PREDICTED: LIM/homeobox protein Lhx8 [Loxodonta africana]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 67
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>gi|193786574|dbj|BAG51357.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD + YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSSYCKEDYYR 108
>gi|432876050|ref|XP_004072952.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oryzias latipes]
Length = 380
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 74 CAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 129
>gi|390466088|ref|XP_002751019.2| PREDICTED: LIM/homeobox protein Lhx8 [Callithrix jacchus]
Length = 346
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE + C +C E ITD+Y+ +V+ +WH CLRC +C L+R SC+++D +YCK DY
Sbjct: 3 TEFKTCGSCAEPITDRYIFEVNGSAWHGSCLRCTVCFCPLERQVSCYLRDGDMYCKSDYI 62
Query: 67 K 67
K
Sbjct: 63 K 63
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ T+ CV C I D+YL++VS ++WH +CL+CC+C L R +C+ KD +YCK D
Sbjct: 21 VSTQGERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKAD 80
Query: 65 YAK 67
YA+
Sbjct: 81 YAR 83
>gi|76667074|dbj|BAE45356.1| LIM homeodomain type transcription factor Lhx2 [Danio rerio]
Length = 395
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK++Y +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFDKDGSIYCKEEYYR 108
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L RH SC+I+D+ V+CK DY
Sbjct: 106 CTSCGLEIVDRYLLKVNNLCWHVRCLSCSVCKTSLGRHVSCYIRDKEVFCKLDY 159
>gi|403257739|ref|XP_003921454.1| PREDICTED: LIM/homeobox protein Lhx8 [Saimiri boliviensis
boliviensis]
Length = 346
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG +I D+Y+L+V+ D WHA CL+C C LD H +CF++D YCK DY +
Sbjct: 73 LSLCVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDYVR 132
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L D+ WHA CL+CC C+L LD +CF +D +YCK+DY +
Sbjct: 30 CAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIYCKEDYYR 85
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +C + I D+YLL+V+D WH +CL C +C+ L RH SC+IK++ V+CK DY
Sbjct: 58 CTSCNKDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDY 111
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I DK+LL+V ++ WH +CLRC +CQ L RH +C+ ++ V+CK DY +
Sbjct: 51 CTGCGGPIQDKFLLKVGERQWHVKCLRCSVCQTPLGRHTTCYTREADVFCKADYIR 106
>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Acyrthosiphon pisum]
Length = 513
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG +I D+Y+L+V+ D WHA CL+C C LD H +CF++D YCK DY +
Sbjct: 99 LSLCVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDYVR 158
>gi|47223723|emb|CAF99332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG+ I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 46 CASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 99
>gi|444730284|gb|ELW70671.1| Insulin enhancer protein ISL-2 [Tupaia chinensis]
Length = 577
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY
Sbjct: 38 CVGCGSQIHDQFILRVSPDLEWHASCLKCAECSQYLDETCTCFVRDGKTYCKRDY 92
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ +YCK DY
Sbjct: 93 CSNCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDY 146
>gi|328925124|dbj|BAK19077.1| apterous B alpha [Bombyx mori]
Length = 349
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L D+ WH CLRCC C+L LD +CF +D +YCK+DY +
Sbjct: 18 CAGCGGKIQDRYYLLAVDRQWHGSCLRCCECRLPLDTELTCFSRDGNIYCKEDYYR 73
>gi|148237976|ref|NP_001079958.1| LIM homeobox 8 [Xenopus laevis]
gi|34784686|gb|AAH57730.1| MGC68912 protein [Xenopus laevis]
Length = 282
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ +YCK DY
Sbjct: 93 CNNCGMEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDY 146
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CGE I DKYLL+V+D WH +CL C +C L H SC+IK++ V+CK DY
Sbjct: 55 CANCGEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLGSHTSCYIKEKEVFCKMDY 108
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCK 62
+I+TE+ C C + I DK++L+V D+ WH CL+C CQ+ L DR CF + +VYCK
Sbjct: 32 SILTEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR---CFSRAGSVYCK 88
Query: 63 QDY 65
+D+
Sbjct: 89 EDF 91
>gi|195012851|ref|XP_001983760.1| GH15398 [Drosophila grimshawi]
gi|193897242|gb|EDV96108.1| GH15398 [Drosophila grimshawi]
Length = 618
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V D +WH QCL CC C L L H +C++++ +YCKQDY +
Sbjct: 255 CEGCGQKIHDRYLMNVGDANWHEQCLACCYCGLQL--HHTCYVRNSKLYCKQDYDR 308
>gi|51571915|ref|NP_001004015.1| LIM/homeobox protein Lhx6 [Danio rerio]
gi|50953777|gb|AAT90495.1| Lhx6 [Danio rerio]
gi|190336767|gb|AAI62225.1| LIM homeobox 6 [Danio rerio]
Length = 375
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 97 CASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 150
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 94 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 147
>gi|297473064|ref|XP_002686347.1| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
gi|296489244|tpg|DAA31357.1| TPA: LIM domain family member (lim-4)-like [Bos taurus]
Length = 346
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 98 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 151
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 172 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 225
>gi|47207847|emb|CAF94375.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C +CG+ I D+YLL+V+D WH +CL C +C+ L RH SC+IK++ V+CK DY +
Sbjct: 59 CTSCGQDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDYFR 114
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|58866006|ref|NP_001012219.1| LIM/homeobox protein Lhx8 [Rattus norvegicus]
gi|58476609|gb|AAH90011.1| LIM homeobox 8 [Rattus norvegicus]
Length = 336
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG SI D+Y L V+D++WH QCLRCC C L+ SC+ ++ +YCK DY +
Sbjct: 16 CAGCGISIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDYYR 71
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
R C CG I+ + +++ D +H C C IC +L + I+D ++C + Y
Sbjct: 76 RRCARCGSGISASELVMRAKDLIFHVNCFSCTICGQLLRGGDTAGIRDGRIFCGEHY 132
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 155 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 208
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
>gi|410967547|ref|XP_003990280.1| PREDICTED: LIM/homeobox protein Lhx8 [Felis catus]
Length = 346
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 118
>gi|357622661|gb|EHJ74087.1| apterous [Danaus plexippus]
Length = 359
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L D+ WH CLRCC C+L LD +CF +D +YCK DY +
Sbjct: 18 CAGCGGRIQDRYYLLAVDRQWHGACLRCCECRLPLDSELTCFSRDGNIYCKDDYYR 73
>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
terrestris]
gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
impatiens]
Length = 458
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 11 YCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+CV CG I D+++L+V+ + WHA CL+C CQ LD H +CF++D YCK+DY +
Sbjct: 52 HCVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEHCTCFVRDGKTYCKRDYVR 109
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C E + D Y+++ K +H +C RC C L ++ + ++C+ D+
Sbjct: 115 CDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCRHDH 169
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 14 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 67
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 125
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 70 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 123
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 59 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 118
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDE-AVYCKQDY 65
C CG S + + ++++ K +H +C RC C L ++D A+YCK+D+
Sbjct: 124 CDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKEDH 179
>gi|74213688|dbj|BAE35644.1| unnamed protein product [Mus musculus]
Length = 367
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|124377602|dbj|BAF46218.1| LIM homeobox gene 9 gamma protein [Glandirana rugosa]
Length = 331
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
>gi|124377606|dbj|BAF46220.1| LIM homeobox gene 9 epsilon protein [Glandirana rugosa]
Length = 297
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
>gi|113195680|ref|NP_034843.2| LIM/homeobox protein Lhx8 [Mus musculus]
gi|341941136|sp|O35652.4|LHX8_MOUSE RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8; AltName: Full=L3; AltName: Full=LIM/homeobox protein
Lhx7; Short=LIM homeobox protein 7
gi|3172042|dbj|BAA28628.1| LIM-homeodomain protein [Mus musculus]
gi|74227158|dbj|BAE38359.1| unnamed protein product [Mus musculus]
gi|116138618|gb|AAI25284.1| LIM homeobox protein 8 [Mus musculus]
gi|116138795|gb|AAI25282.1| LIM homeobox protein 8 [Mus musculus]
gi|148679947|gb|EDL11894.1| LIM homeobox protein 8, isoform CRA_b [Mus musculus]
gi|219519204|gb|AAI44769.1| LIM homeobox protein 8 [Mus musculus]
gi|1587483|prf||2206477A LIM homeo domain transcription factor
Length = 367
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|124377600|dbj|BAF46217.1| LIM homeobox gene 9 beta protein [Glandirana rugosa]
Length = 347
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
>gi|149026292|gb|EDL82535.1| rCG29002 [Rattus norvegicus]
Length = 367
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 39 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 92
>gi|148707589|gb|EDL39536.1| LIM homeobox protein 9, isoform CRA_a [Mus musculus]
Length = 342
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 115
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
>gi|6180222|emb|CAB59909.1| putative LIM homeodomain protein [Mus musculus]
Length = 299
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 40 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 93
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 126
>gi|344254817|gb|EGW10921.1| LIM/homeobox protein Lhx9 [Cricetulus griseus]
Length = 311
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
>gi|167859072|gb|ACA04471.1| Lhx2 [Strongylocentrotus purpuratus]
Length = 251
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D++ L +D+ WH QCL+CC C + LD SCF K+ +YCK+DY K
Sbjct: 51 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLK 106
>gi|3319763|emb|CAA04012.1| Lhx7 protein [Mus musculus]
Length = 365
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 95 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 148
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 67 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 120
>gi|291398678|ref|XP_002715959.1| PREDICTED: LIM homeobox 8 [Oryctolagus cuniculus]
Length = 371
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ DK WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 184 CAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 239
>gi|326924942|ref|XP_003208681.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Meleagris
gallopavo]
Length = 271
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 65
>gi|297294254|ref|XP_001094225.2| PREDICTED: insulin gene enhancer protein ISL-1-like [Macaca
mulatta]
Length = 286
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 97 CASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 150
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 49 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 108
>gi|431897001|gb|ELK06265.1| LIM/homeobox protein Lhx8 [Pteropus alecto]
Length = 306
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 71 CAGCGGKISDRYYLLAVDKRWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 183 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEITCFSRDGNIYCKKDYYR 238
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ +WH CL C +C+ L +H SC++K++ ++CK DY
Sbjct: 19 CASCGMDIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 72
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix
jacchus]
Length = 348
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D++L++V + SWH QCL+C +CQ L R SC+ KD +YCK DY K
Sbjct: 41 CAGCQQPIEDRFLMRVMENSWHEQCLQCSVCQSPLSR--SCYFKDRKLYCKGDYEK 94
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C +SIT ++ +++ +H +C C IC L + ++D ++CK DY K
Sbjct: 100 CNGCLQSITSNELVMRALCNVYHLRCFNCIICNQRLQKGDEFVVRDNQLFCKVDYEK 156
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CGE I D++ L D+ WH+ CL+CC C + LD +CF KD +YC++DY +
Sbjct: 15 CGGCGEKIQDRFFLHAVDRQWHSACLKCCECDVRLDCELTCFSKDGRIYCREDYYR 70
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 186 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 241
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 188 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 243
>gi|348543221|ref|XP_003459082.1| PREDICTED: LIM/homeobox protein Lhx9-like [Oreochromis niloticus]
Length = 509
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
I E C CGE + D++ L + + WH CLRC CQ L HPS + +D +YC+QDY
Sbjct: 166 IQEPMTCAGCGEQVLDRFFLLAAGRVWHNPCLRCSQCQCELQTHPSLYWRDGNIYCQQDY 225
Query: 66 AK 67
+
Sbjct: 226 CR 227
>gi|319740961|gb|ADV69000.1| lim-homeobox 2/9 [Patiria miniata]
Length = 304
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D+Y L +D+ WH +CLRCC C++ LD +CF KD +YCK+ Y
Sbjct: 48 CAGCGGPIQDRYYLLAADQQWHTECLRCCECKVTLDNELTCFAKDGGIYCKEHY 101
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 53 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 112
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH CL+C C L LD +CF KD ++CK+DY +
Sbjct: 61 CAGCGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGEIFCKEDYYR 116
>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
mellifera]
Length = 418
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 11 YCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+CV CG I D+++L+V+ + WHA CL+C CQ LD H +CF++D YCK+DY +
Sbjct: 12 HCVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEHCTCFVRDGKTYCKRDYVR 69
>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
Length = 419
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 11 YCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+CV CG I D+++L+V+ + WHA CL+C CQ LD H +CF++D YCK+DY +
Sbjct: 13 HCVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEHCTCFVRDGKTYCKRDYVR 70
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D+Y+L+V+ D WHA CL+C C LD + +CF++D YCK+DY +
Sbjct: 8 LSLCVGCGAQIHDQYILRVAPDLEWHAACLKCAECHQFLDENCTCFVRDGKTYCKRDYVR 67
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG+S + + ++++ K +H C RC C+ L ++++ ++CK+D+
Sbjct: 73 CDKCGQSFSKNDFVMRAKTKIYHVDCFRCTACERQLVPGDEFALREDGLFCKEDH 127
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 53 LSLCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 112
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C E I DKYLL+V+D WH +CL C +CQ L H SC+IK++ ++CK DY
Sbjct: 55 CANCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHASCYIKEKEIFCKLDY 108
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DYA+
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQHLDETCTCFVRDGKTYCKRDYAR 83
>gi|270004609|gb|EFA01057.1| hypothetical protein TcasGA2_TC003974 [Tribolium castaneum]
Length = 218
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L D+ WHA CL+CC C+L LD +CF +D +YCK+DY +
Sbjct: 30 CAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIYCKEDYYR 85
>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
Length = 465
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 50 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 106
>gi|242023957|ref|XP_002432397.1| lim homeobox protein, putative [Pediculus humanus corporis]
gi|212517820|gb|EEB19659.1| lim homeobox protein, putative [Pediculus humanus corporis]
Length = 340
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ L D+ WHA CL+CC C++ LD +CF + +YCK+DY +
Sbjct: 285 CAGCGRKISDRFYLSAVDRKWHATCLQCCQCRIALDGEITCFTRHGNIYCKKDYYR 340
>gi|328925118|dbj|BAK19074.1| Bmptp-Z and Bmap-A fusion protein alpha [Bombyx mori]
Length = 466
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY +
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIR 187
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C I+ + +++ D +H C C +C L++ + I+D AVYC+ Y
Sbjct: 192 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHY 248
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF+++ YCK+DYA+
Sbjct: 22 CVGCGSKIQDQYILRVAPDLEWHAACLKCADCDQFLDETCTCFVREGKTYCKRDYAR 78
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C ES + + ++++ +K +H C RC C L ++D+ ++CK D+
Sbjct: 84 CARCTESFSKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALRDDGLFCKSDH 138
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYVR 73
>gi|328925128|dbj|BAK19079.1| apterous A splicing isoform type B [Bombyx mori]
Length = 398
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY +
Sbjct: 64 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIR 119
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C I+ + +++ D +H C C +C L++ + I+D AVYC+ Y
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHY 180
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDRYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|301623765|ref|XP_002941184.1| PREDICTED: LIM/homeobox protein Lhx6-like [Xenopus (Silurana)
tropicalis]
Length = 389
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 96 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHNSCYIKNKEIFCKMDY 149
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 24 LSLCVGCGTQIHDQYILRVAPDLEWHAACLKCQECHQFLDESCTCFVRDGKTYCKRDYVR 83
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKD-EAVYCKQDY 65
C CG S + + ++++ K +H +C RC +C L ++D A+YCK+D+
Sbjct: 89 CDKCGNSFSKNDFVMRAKSKIYHIECFRCSLCMKHLQPGDEFALRDGGALYCKEDH 144
>gi|405976917|gb|EKC41395.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 280
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E + C C E I D+Y L V+ WH CLRCC+C L++ SCF+KDE +YC++DY
Sbjct: 48 EGQACEGCQEVIADRYFLHVNGACWHTDCLRCCVCCSSLEQEESCFVKDENIYCRRDY 105
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 328
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 175 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 230
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 274 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 327
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 673 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 726
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 732 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 788
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 83
>gi|328925130|dbj|BAK19080.1| apterous A splicing isoform type C [Bombyx mori]
Length = 385
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY +
Sbjct: 64 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIR 119
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C I+ + +++ D +H C C +C L++ + I+D AVYC+ Y
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHY 180
>gi|328925120|dbj|BAK19075.1| Bmptp-Z and Bmap-A fusion protein beta [Bombyx mori]
Length = 444
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY +
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIR 187
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C I+ + +++ D +H C C +C L++ + I+D AVYC+ Y
Sbjct: 192 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHY 248
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 433 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 486
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 492 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 548
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|395541258|ref|XP_003772563.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 365
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I DKYLL+V+D WH QCL C +CQ L +H +CFIKD ++CK DY +
Sbjct: 85 CSGCRLEILDKYLLKVNDMYWHMQCLCCSVCQTSLGKHATCFIKDNTIFCKIDYLR 140
>gi|328925116|dbj|BAK19073.1| apterous A splicing isoform type A [Bombyx mori]
Length = 376
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY +
Sbjct: 64 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIR 119
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C I+ + +++ D +H C C +C L++ + I+D AVYC+ Y
Sbjct: 124 KRCARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTYGIRDAAVYCRLHY 180
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri
boliviensis boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DYA+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 245 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 300
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 277 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 330
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +C E I DKYLL+V+D WH +CL C +C L H SC+IK++ V+CK DY
Sbjct: 12 CASCSEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLSSHTSCYIKEKEVFCKLDY 65
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 14 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 70
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|355692896|gb|EHH27499.1| Insulin gene enhancer protein ISL-2 [Macaca mulatta]
Length = 310
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLGWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYS 82
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|195327101|ref|XP_002030260.1| GM25340 [Drosophila sechellia]
gi|194119203|gb|EDW41246.1| GM25340 [Drosophila sechellia]
Length = 637
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 274 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 327
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
R C CG I D+Y L V + WH CL+C C+ L++H SCF++ +YCK DY
Sbjct: 23 RLCTGCGNPICDRYFLCVGEMYWHVGCLQCAHCKTTLEQHASCFLRSGRIYCKNDY 78
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 9 LRYCVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
LR C C I + + +++V D +H C C C + L R + ++D+ VYC Y
Sbjct: 84 LRPCSRCNIGIFSTELVMRVRDYVYHTHCFTCAWCNIPLSRGDTFGVRDQLVYCSLHYG 142
>gi|410960782|ref|XP_003986966.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Felis catus]
Length = 354
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|380027052|ref|XP_003697250.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis florea]
Length = 390
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature:
LIM2, bp 517 .. 669; amino acid feature: homeodomain,
bp 820 .. 999 [Gallus gallus]
Length = 349
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQCLDESCTCFVRDGKTYCKRDYIR 73
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
CV CG I D+Y+L+V+ + WHA CL+C C L LD +CF++D YCKQDY
Sbjct: 25 CVGCGTPIQDQYMLRVAPNLEWHAGCLKCADCGLHLDESRTCFVRDGKTYCKQDY 79
>gi|328787166|ref|XP_003250891.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis mellifera]
Length = 390
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|383850874|ref|XP_003700999.1| PREDICTED: LIM/homeobox protein Lhx9-like [Megachile rotundata]
Length = 391
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 47 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 106
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEA-VYCKQDY 65
C CG S + D ++++ K +H +C +CC C L ++D +YCK+D+
Sbjct: 112 CDRCGSSFSKDDFVMRAKSKIYHIKCFKCCACSRPLVPGDEFALRDGGNLYCKEDH 167
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+V+ D WHA CL+C CQ LD +CF++D YCK DY +
Sbjct: 47 CVGCGGRIHDQWILRVAPDLEWHAACLKCAACQQFLDESCTCFVRDGKTYCKDDYVR 103
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 102 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 155
>gi|351696280|gb|EHA99198.1| LIM/homeobox protein Lhx8 [Heterocephalus glaber]
Length = 348
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+ WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 67 CNSCGLEIVDKYLLKVNGLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 120
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|143347140|gb|ABO93218.1| Lhx2 [Platynereis dumerilii]
Length = 280
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C ACG I D+Y L DK WH CL+C C L LD +CF KD +YCK+DY +
Sbjct: 49 CAACGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGDIYCKEDYYR 104
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I +++ L+ +D+ WH CLRCC C+L L +CF +D +YCK+DY +
Sbjct: 46 CGGCGREIAERWYLRAADRPWHCGCLRCCHCRLPLAAELTCFARDGNIYCKEDYYR 101
>gi|195376257|ref|XP_002046913.1| GJ13148 [Drosophila virilis]
gi|194154071|gb|EDW69255.1| GJ13148 [Drosophila virilis]
Length = 588
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 224 CEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKLDYDR 277
>gi|357622660|gb|EHJ74086.1| apterous a [Danaus plexippus]
Length = 397
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG ITD+Y L ++ WH CLRCC C++ LD C+ +D ++CK DY
Sbjct: 63 CAGCGARITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 116
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ C C +I+ + +++ D +H C C +C L + + I+D AVYC+ Y
Sbjct: 123 KRCSRCNTTISASELVMRARDLVFHVHCFSCALCSARLTKGDTFGIRDSAVYCRLHY 179
>gi|195493808|ref|XP_002094572.1| GE21898 [Drosophila yakuba]
gi|194180673|gb|EDW94284.1| GE21898 [Drosophila yakuba]
Length = 642
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 328
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V + +WH QCL CC C L L H +C++++ +YCK DY +
Sbjct: 249 CEGCGQKIHDRFLMNVGEANWHEQCLACCYCGLQL--HHTCYVRNSKLYCKMDYDR 302
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 4 LSLCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 63
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF+++ YCK DY +
Sbjct: 104 CVGCGSQIQDQYILRVSPDLEWHASCLKCVECLQFLDESCTCFVREGKTYCKSDYHR 160
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|194869797|ref|XP_001972523.1| GG15572 [Drosophila erecta]
gi|190654306|gb|EDV51549.1| GG15572 [Drosophila erecta]
Length = 652
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D++L+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 283 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKMDYDR 336
>gi|431900753|gb|ELK08194.1| LIM/homeobox protein Lhx6 [Pteropus alecto]
Length = 260
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+ CV CG ITD+Y+L+V+ D WHA CLRC C LD +CF++D YCK+DY +
Sbjct: 14 ISMCVGCGSQITDQYILRVAPDLEWHASCLRCTDCNQYLDESCTCFVRDGKTYCKRDYVR 73
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I +++ L+ +D+ WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 58 CGGCGREIAERWYLKAADRVWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYCR 113
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 141
>gi|426362929|ref|XP_004048602.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Gorilla gorilla
gorilla]
Length = 369
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 92 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 145
>gi|194758260|ref|XP_001961380.1| GF13843 [Drosophila ananassae]
gi|190622678|gb|EDV38202.1| GF13843 [Drosophila ananassae]
Length = 469
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 141 ITRNLDECAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 200
Query: 65 Y 65
Y
Sbjct: 201 Y 201
>gi|426223096|ref|XP_004023228.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like
[Ovis aries]
Length = 370
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 102 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 155
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C +I D+YL++V D WH QCL+C +C++ L SCF +D +YCK DY K
Sbjct: 33 CAGCQRAIDDRYLMKVMDHCWHEQCLQCSVCRIRLSH--SCFARDRKLYCKLDYEK 86
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|156393340|ref|XP_001636286.1| predicted protein [Nematostella vectensis]
gi|156223388|gb|EDO44223.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D++L++V D++WH CL+CCIC+ L R SCF KD +YC+ DY K
Sbjct: 1 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSR--SCFSKDRKLYCRTDYEK 54
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 277 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 330
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 336 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 392
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ +WH CL C +C+ L +H SC++K++ +YCK DY
Sbjct: 114 CASCGMEIHDRYLLKVNNLNWHLGCLECSVCRASLRQHSSCYVKNKEIYCKLDY 167
>gi|195126146|ref|XP_002007535.1| GI13003 [Drosophila mojavensis]
gi|193919144|gb|EDW18011.1| GI13003 [Drosophila mojavensis]
Length = 607
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V D +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 244 CEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKLDYDR 297
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|195425678|ref|XP_002061119.1| apterous [Drosophila willistoni]
gi|27374312|gb|AAO01060.1| ap-PA [Drosophila willistoni]
gi|194157204|gb|EDW72105.1| apterous [Drosophila willistoni]
Length = 469
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 142 ITRSLDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 201
Query: 65 Y 65
Y
Sbjct: 202 Y 202
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C + LD +CF+++ YCK+DY +
Sbjct: 17 CVGCGSQIHDQYILRVAPDLEWHASCLKCADCHMYLDEKCTCFVREGKTYCKRDYVR 73
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|332229917|ref|XP_003264133.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Nomascus
leucogenys]
Length = 376
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYA 66
E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+
Sbjct: 148 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFF 204
Query: 67 K 67
K
Sbjct: 205 K 205
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 95 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 148
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y+L+VS D WHA CL+C C+ LD +CF++D YCK DY +
Sbjct: 1318 CNGCGHEILDQYILRVSPDLEWHAACLKCVDCRQFLDETCTCFVRDGKPYCKLDYVR 1374
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CGE + Y+++ + +H C +C +C L ++ A+YCK DY
Sbjct: 1380 CSKCGEVFDRNDYVMRAKNNLYHISCFKCVVCTRPLLPGDEFALRHIALYCKADY 1434
>gi|110748616|gb|ABG89861.1| Lhx6, partial [Astyanax mexicanus]
Length = 303
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L +H SC+IK++ ++CK DY
Sbjct: 110 CASCGLEILDRYLLKVNNLIWHXRCLECSVCRTSLRQHSSCYIKNKEIFCKMDY 163
>gi|125810912|ref|XP_001361667.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|195154388|ref|XP_002018104.1| GL16944 [Drosophila persimilis]
gi|27374288|gb|AAO01041.1| ap-PA [Drosophila pseudoobscura]
gi|54636843|gb|EAL26246.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|194113900|gb|EDW35943.1| GL16944 [Drosophila persimilis]
Length = 469
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK DY
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|195353746|ref|XP_002043364.1| GM16501 [Drosophila sechellia]
gi|194127487|gb|EDW49530.1| GM16501 [Drosophila sechellia]
Length = 535
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 207 ITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 266
Query: 65 Y 65
Y
Sbjct: 267 Y 267
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
+++T++ C C + I D+++L+V DK WHAQCL+C C L CF + VYCK+
Sbjct: 70 SVLTKIPKCTGCAQHIFDRFILKVQDKPWHAQCLKCGDCGRQLT--DKCFSRGSFVYCKE 127
Query: 64 DYAK 67
D+ K
Sbjct: 128 DFFK 131
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 24 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 81
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +C ++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDYIR 73
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ +WH CL C +C+ L +H SC++K++ ++CK DY
Sbjct: 32 CASCGMEIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 85
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 128 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDY 181
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQD 64
+ E+ C C + I DK++L+V D+ WH CL+C CQ+ L DR CF + +VYCK+D
Sbjct: 83 LPEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR---CFSRAGSVYCKED 139
Query: 65 YAK 67
+ K
Sbjct: 140 FFK 142
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V + +WH QCL CC C + L H +C++++ +YCK DY +
Sbjct: 270 CEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQL--HHTCYVRNSKLYCKLDYDR 323
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|195402627|ref|XP_002059906.1| apterous [Drosophila virilis]
gi|27374202|gb|AAN87274.1| ap [Drosophila virilis]
gi|194140772|gb|EDW57243.1| apterous [Drosophila virilis]
Length = 472
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK DY
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 203
>gi|324511084|gb|ADY44626.1| LIM/homeobox protein Awh [Ascaris suum]
Length = 384
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E C +C E I D+ LL V+ + WH +CLRC C + LD++PSCFIK++ +YCK Y +
Sbjct: 115 EAEVCSSCTEYILDRILLNVNSRFWHTECLRCSQCSVHLDQYPSCFIKEDIIYCKPCYNR 174
>gi|281360182|ref|NP_001163058.1| apterous, isoform C [Drosophila melanogaster]
gi|17862966|gb|AAL39960.1| SD05618p [Drosophila melanogaster]
gi|272432345|gb|ACZ94338.1| apterous, isoform C [Drosophila melanogaster]
Length = 468
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 140 ITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 199
Query: 65 Y 65
Y
Sbjct: 200 Y 200
>gi|194864184|ref|XP_001970812.1| ap [Drosophila erecta]
gi|190662679|gb|EDV59871.1| ap [Drosophila erecta]
Length = 469
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 141 ITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 200
Query: 65 Y 65
Y
Sbjct: 201 Y 201
>gi|332229915|ref|XP_003264132.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Nomascus
leucogenys]
Length = 365
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|344271985|ref|XP_003407817.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Loxodonta africana]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|195475694|ref|XP_002090119.1| GE19443 [Drosophila yakuba]
gi|194176220|gb|EDW89831.1| GE19443 [Drosophila yakuba]
Length = 469
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 141 ITRSLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 200
Query: 65 Y 65
Y
Sbjct: 201 Y 201
>gi|195027475|ref|XP_001986608.1| GH20430 [Drosophila grimshawi]
gi|193902608|gb|EDW01475.1| GH20430 [Drosophila grimshawi]
Length = 469
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK DY
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>gi|195160505|ref|XP_002021116.1| GL25169 [Drosophila persimilis]
gi|194118229|gb|EDW40272.1| GL25169 [Drosophila persimilis]
Length = 613
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V + +WH QCL CC C + L H +C+++ +YCK DY +
Sbjct: 250 CEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQL--HHTCYVRSSKLYCKMDYDR 303
>gi|395824119|ref|XP_003785318.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Otolemur garnettii]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|24585889|ref|NP_724428.1| apterous, isoform A [Drosophila melanogaster]
gi|195580840|ref|XP_002080242.1| GD10352 [Drosophila simulans]
gi|231559|sp|P29673.1|APTE_DROME RecName: Full=Protein apterous
gi|7601|emb|CAA46276.1| developmental regulatory protein [Drosophila melanogaster]
gi|157822|gb|AAA28673.1| LIM-homeodomain apterous protein [Drosophila melanogaster]
gi|7302219|gb|AAF57314.1| apterous, isoform A [Drosophila melanogaster]
gi|28912908|gb|AAO61758.1| HL02012p [Drosophila melanogaster]
gi|194192251|gb|EDX05827.1| GD10352 [Drosophila simulans]
gi|220942502|gb|ACL83794.1| ap-PA [synthetic construct]
gi|220952712|gb|ACL88899.1| ap-PA [synthetic construct]
Length = 469
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 141 ITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 200
Query: 65 Y 65
Y
Sbjct: 201 Y 201
>gi|410043125|ref|XP_003951564.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan troglodytes]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|403266045|ref|XP_003925208.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|297270226|ref|XP_002800034.1| PREDICTED: LIM/homeobox protein Lhx6 [Macaca mulatta]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|198464782|ref|XP_001353366.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
gi|198149877|gb|EAL30873.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL+ V + +WH QCL CC C + L H +C+++ +YCK DY +
Sbjct: 257 CEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQL--HHTCYVRSSKLYCKMDYDR 310
>gi|426362927|ref|XP_004048601.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Gorilla gorilla
gorilla]
Length = 384
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 92 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 145
>gi|390458313|ref|XP_003732090.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 4 [Callithrix jacchus]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|195119850|ref|XP_002004442.1| GI19612 [Drosophila mojavensis]
gi|193909510|gb|EDW08377.1| GI19612 [Drosophila mojavensis]
Length = 485
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK DY
Sbjct: 163 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 216
>gi|345487077|ref|XP_001599660.2| PREDICTED: hypothetical protein LOC100114734 [Nasonia vitripennis]
Length = 644
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF ++ +YCK+DY +
Sbjct: 239 CAGCGLRISDRFYLQAVDRRWHASCLQCSHCRQGLDGEVTCFSREGNIYCKKDYYR 294
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|307196004|gb|EFN77729.1| Protein apterous [Harpegnathos saltator]
Length = 240
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ D+ WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 185 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGESTCFSRDGNIYCKKDYYR 240
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 14 ACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CG I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 139 GCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 192
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ ++ + C C E I D+Y+L+VSD++WHA CLRC C+ +L CF ++ +YC
Sbjct: 127 EVFLSSIPKCGGCHEMIVDRYVLKVSDRTWHAGCLRCVECRAMLS--GKCFARNNQLYCT 184
Query: 63 QDYAK 67
+D+ K
Sbjct: 185 EDFFK 189
>gi|334191689|ref|NP_001229262.1| LIM/homeobox protein Lhx6 isoform 3 [Homo sapiens]
gi|221041678|dbj|BAH12516.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 292 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 345
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 351 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 407
>gi|224994808|ref|NP_001139341.1| apterous a [Tribolium castaneum]
gi|224459212|gb|ACN43341.1| apterous a [Tribolium castaneum]
Length = 465
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 19 ITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
ITD++ LQ D+ WHA CL+CC C+ LD +CF +D +YCK+DY +
Sbjct: 137 ITDRFYLQAVDRRWHASCLQCCQCRNTLDGEITCFSRDGNIYCKKDYYR 185
>gi|322778961|gb|EFZ09372.1| hypothetical protein SINV_02768 [Solenopsis invicta]
Length = 246
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D++ LQ DK WHA CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 191 CAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 246
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 209 CEGCQRPISDRFLLRVNEASWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 262
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 268 CSGCLEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEK 324
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|297685274|ref|XP_002820220.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Pongo abelii]
Length = 366
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|332229919|ref|XP_003264134.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Nomascus
leucogenys]
Length = 391
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 97 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 150
>gi|307189897|gb|EFN74141.1| LIM homeobox transcription factor 1 beta [Camponotus floridanus]
Length = 402
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY+++V+++++H +CL C +C +L SCFI+D +YC+ DY +
Sbjct: 58 CAGCGRTIADKYVMRVAERNYHEECLSCTVCGAMLSH--SCFIRDLKLYCRSDYER 111
>gi|301608740|ref|XP_002933954.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Xenopus
(Silurana) tropicalis]
Length = 533
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I+D++LL+V+D+SWH C++C C +L +C+ ++ +YCK+DY K
Sbjct: 186 CAGCGNTISDRFLLRVNDRSWHECCVKCAACLQILS--GTCYYRNRQLYCKEDYDK 239
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C +C +++ + +++V +H C CC C+ L+R +K+ + C+ DY +
Sbjct: 245 CNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKEGQLLCRSDYER 301
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|443696309|gb|ELT97042.1| hypothetical protein CAPTEDRAFT_167444 [Capitella teleta]
Length = 444
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CGE+ITD+Y L ++ WH CL C C LD +C+ KD +YCK+DY +
Sbjct: 99 CAGCGETITDRYYLTTVEQCWHVHCLMCVDCHRPLDTQMTCYAKDGNIYCKEDYYR 154
>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
rotundata]
Length = 416
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 11 YCVACGESITDKYLLQVSDK-SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+CV CG I D+++L+V+ WHA CL+C CQ LD H +CF++D YCK+DY +
Sbjct: 10 HCVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEHCTCFVRDGKTYCKRDYVR 67
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
TE+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK+D+
Sbjct: 7 TEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKEDFF 64
Query: 67 K 67
K
Sbjct: 65 K 65
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 28 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 85
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C I D+++L+V D++WHA+CLRC C L DR CF +D V+CK+D+ K
Sbjct: 147 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDR---CFSRDGGVFCKEDFFK 200
>gi|241688853|ref|XP_002411721.1| LIM domain containing protein [Ixodes scapularis]
gi|215504541|gb|EEC14035.1| LIM domain containing protein [Ixodes scapularis]
Length = 173
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 10 RYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
R CV CG I D+Y+L+V+ D WHA CL+C CQ LD +CF++D YCK+DY +
Sbjct: 25 RVCVGCGAPIRDQYILRVAPDLEWHAACLKCADCQQFLDETCTCFVRDGKTYCKRDYVR 83
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DYA+
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|403266043|ref|XP_003925207.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D+YLL+V++ +WH CL C +C+ L +H SC++K++ +YCK DY
Sbjct: 68 CANCGIEIHDRYLLKVNNLNWHLGCLECSVCRASLHQHSSCYVKNKEIYCKLDY 121
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C + I DK++L+V D+ WH CL+C CQ+ L DR CF + +VYCK+D+ K
Sbjct: 580 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR---CFSRAGSVYCKEDFFK 633
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 48 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 101
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 84 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 137
>gi|390458311|ref|XP_003732089.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Callithrix jacchus]
Length = 381
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 141
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 98 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 151
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 32 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAE--KCFSRGDGVYCKEDFFK 89
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 32 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAE--KCFSRGDGVYCKEDFFK 89
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 57
>gi|440906624|gb|ELR56864.1| LIM/homeobox protein Lhx6, partial [Bos grunniens mutus]
Length = 360
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 72 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 125
>gi|390458307|ref|XP_002806566.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Callithrix jacchus]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|348570158|ref|XP_003470864.1| PREDICTED: LIM/homeobox protein Lhx6-like [Cavia porcellus]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|281337700|gb|EFB13284.1| hypothetical protein PANDA_004030 [Ailuropoda melanoleuca]
Length = 360
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 72 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 125
>gi|167773589|gb|ABZ92229.1| LIM homeobox 6 [synthetic construct]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|117645548|emb|CAL38240.1| hypothetical protein [synthetic construct]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|334191691|ref|NP_001229263.1| LIM/homeobox protein Lhx6 isoform 4 [Homo sapiens]
gi|90185239|sp|Q9UPM6.2|LHX6_HUMAN RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|7018428|emb|CAB66505.1| hypothetical protein [Homo sapiens]
gi|74353529|gb|AAI03938.1| LIM homeobox 6 [Homo sapiens]
gi|117646920|emb|CAL37575.1| hypothetical protein [synthetic construct]
gi|119607922|gb|EAW87516.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|119607923|gb|EAW87517.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|158260677|dbj|BAF82516.1| unnamed protein product [Homo sapiens]
gi|189054037|dbj|BAG36544.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 30 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAE--KCFSRGDGVYCKEDFFK 87
>gi|5738958|dbj|BAA83422.1| LIM-homeodomain (LHX) protein 6.1a [Homo sapiens]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 30 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAE--KCFSRGDGVYCKEDFFK 87
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 95 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 151
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 152 YCKEDFFK 159
>gi|410978995|ref|XP_003995872.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Felis catus]
Length = 363
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|395505631|ref|XP_003757143.1| PREDICTED: LIM/homeobox protein Lhx6 [Sarcophilus harrisii]
Length = 363
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|355567465|gb|EHH23806.1| hypothetical protein EGK_07356 [Macaca mulatta]
Length = 363
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|351694308|gb|EHA97226.1| LIM/homeobox protein Lhx6 [Heterocephalus glaber]
Length = 294
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 48 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 101
>gi|307204532|gb|EFN83212.1| LIM homeobox transcription factor 1 beta [Harpegnathos saltator]
Length = 402
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY+++V+++++H +CL C C +L SCFI+D +YC+ DY K
Sbjct: 59 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSH--SCFIRDLKLYCRSDYEK 112
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L +++WH++CLRC C+ LD SCF + +YC+ DY +
Sbjct: 7 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDYYR 62
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CGE I D+++L+V D+SWH++CL+C C L CF K E V+CK D+
Sbjct: 47 CAGCGEPILDRFILKVLDRSWHSRCLQCHDCHARLS--DKCFSKGEKVFCKDDF 98
>gi|242023961|ref|XP_002432399.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
gi|212517822|gb|EEB19661.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
Length = 383
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L D+ WH+ CL+C C+ LD +CF +D +YCK+DY +
Sbjct: 31 CAGCGGRILDRYYLLAVDRQWHSPCLKCTECKSPLDTELTCFARDGNIYCKEDYYR 86
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+ K
Sbjct: 74 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFFK 127
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+++VS D WHA CL+C C LD +CF++D YCK+DYA+
Sbjct: 27 CVGCGSQIHDQYIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+++VS D WHA CL+C C LD +CF++D YCK+DYA+
Sbjct: 27 CVGCGSQIHDQYIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D+Y+L+VS D WHA CL+C C LD + +CF++D YCK+DY +
Sbjct: 24 LAVCVGCGSHILDQYILRVSPDLEWHAACLKCAECSQYLDENCTCFVRDGKTYCKRDYIR 83
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+VSD++WHA+CL+C C + L+ CF ++ ++CK
Sbjct: 54 EVLLSTIPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNE--KCFARNGQLFCK 111
Query: 63 QDYAK 67
D+ K
Sbjct: 112 DDFFK 116
>gi|350579610|ref|XP_003480648.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like [Sus
scrofa]
Length = 332
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C I D+++L+V D++WHA+CLRC C L DR CF +D V+CK+D+ K
Sbjct: 87 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDR---CFSRDGGVFCKEDFFK 140
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+VSD++WHA+CL+C C + L+ CF ++ ++CK
Sbjct: 54 EVLLSTIPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNE--KCFARNGQLFCK 111
Query: 63 QDYAK 67
D+ K
Sbjct: 112 DDFFK 116
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+++L+V D+SWHA+CL+C CQ L CF +D VYCK D+
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLT--DKCFSRDGHVYCKDDF 92
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQ-VSDKSWHAQCLRCCICQLVLDRHPSCFIKDEA-VYCKQDY 65
C CG+ I +++ DK +H QC C +C+ L ++ ++A + CK DY
Sbjct: 100 CAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDY 155
>gi|339238047|ref|XP_003380578.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
gi|316976506|gb|EFV59791.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
Length = 337
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C +ITD++ L V+++SWH CLRCC+C+ L+ +CF + + ++CK+DY+K
Sbjct: 10 CSGCQATITDQFYLLVAERSWHIHCLRCCVCRCSLETELTCFSRGDLIFCKEDYSK 65
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQ 63
+ +E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+
Sbjct: 9 LTSEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKE 65
Query: 64 DYAK 67
D+ K
Sbjct: 66 DFFK 69
>gi|444521209|gb|ELV13150.1| LIM/homeobox protein Lhx3 [Tupaia chinensis]
Length = 290
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH+QCL+CC C L CF + E+VYCK D+ K
Sbjct: 28 EIPLCAGCDQHILDRFILKALDRHWHSQCLKCCDCHAPLAER--CFSRGESVYCKDDFFK 85
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b;
Short=Islet-2B; AltName: Full=Insulin gene enhancer
protein isl-3; Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 7 TELRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ L CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY
Sbjct: 22 SGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
Query: 66 AK 67
+
Sbjct: 82 VR 83
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 24 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 81
>gi|332025158|gb|EGI65338.1| LIM homeobox transcription factor 1-beta [Acromyrmex echinatior]
Length = 400
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY+++V+++++H +CL C C +L SCFI+D +YC+ DY +
Sbjct: 56 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSH--SCFIRDLKLYCRSDYER 109
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 4 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 63
>gi|355753054|gb|EHH57100.1| hypothetical protein EGM_06670 [Macaca fascicularis]
Length = 363
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|170048224|ref|XP_001870661.1| lim homeobox protein [Culex quinquefasciatus]
gi|167870355|gb|EDS33738.1| lim homeobox protein [Culex quinquefasciatus]
Length = 189
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D+Y L V+D++WH QCLRCC C L+ SC+ ++ +YCK DY
Sbjct: 81 CAGCGIPIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDY 134
>gi|432105544|gb|ELK31741.1| Insulin protein enhancer protein ISL-1 [Myotis davidii]
Length = 199
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+ CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 31 EIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAE--KCFSRGDSVYCKEDFFK 88
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK D+ K
Sbjct: 24 EIPMCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQL--ADKCFTRGDSVYCKDDFFK 81
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQ 63
++ E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+
Sbjct: 3 LLPEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDR---CFSRAGSVYCKE 59
Query: 64 DYAK 67
D+ K
Sbjct: 60 DFFK 63
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 141 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT--TSCYFRDRKLYCKQDYQQ 194
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 200 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 256
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 5 IITELRY---CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
I+E R CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D Y
Sbjct: 41 FISEKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 100
Query: 61 CKQDYAK 67
CK+DY +
Sbjct: 101 CKRDYIR 107
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 24 EIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAE--KCFSRGDSVYCKEDFFK 81
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 15 EIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAE--KCFSRGDSVYCKEDFFK 72
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 8 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 64
>gi|195084069|ref|XP_001997398.1| GH23605 [Drosophila grimshawi]
gi|193905450|gb|EDW04317.1| GH23605 [Drosophila grimshawi]
Length = 203
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 35 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 94
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L +CV CG I D+Y+L+V+ D WHA CL+C C+ LD +CF++D YCK+DY +
Sbjct: 23 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 82
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRCC C L SCF++ VYC+ DYA
Sbjct: 44 CGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLRGMRVYCRHDYA 98
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 24 EIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKEDFFK 81
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 18 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 74
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 75 YCKEDFFK 82
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda
melanoleuca]
Length = 390
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 8 ELRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+L +C CG I D+Y+LQV+ D +HA CL+C CQ +LD +CF+++ YCK D+
Sbjct: 13 QLPFCSGCGGKINDRYILQVAPDMQYHAACLKCASCQQLLDEKETCFLRNGKPYCKSDF 71
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+++L+V D+SWHA+CL+C CQ L CF +D VYCK D+
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLT--DKCFSRDGHVYCKDDF 92
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQ-VSDKSWHAQCLRCCICQLVLDRHPSCFIKDEA-VYCKQDY 65
C CG+ I +++ DK +H QC C +C+ L ++ ++A + CK DY
Sbjct: 100 CAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCKSDY 155
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH +CL+C CQ L CF + ++VYCK D+ K
Sbjct: 26 EIPVCAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQAQLAE--KCFSRGDSVYCKDDFFK 83
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 14 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 70
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+VSD++WHA+CL+C C++ L+ CF ++ ++CK
Sbjct: 166 EVLLSTIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNE--KCFARNGQLFCK 223
Query: 63 QDYAK 67
D+ K
Sbjct: 224 DDFFK 228
>gi|170032119|ref|XP_001843930.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871879|gb|EDS35262.1| lim homeobox protein [Culex quinquefasciatus]
Length = 400
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG+ I D+Y +++S D+ WH QCL CCIC + L+ SCF K+ VYCK DY
Sbjct: 17 CEGCGQKIKDRYFMKISPDQYWHEQCLLCCICNIQLNH--SCFTKNTKVYCKDDY 69
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ+ L CF + ++VYCK D+ K
Sbjct: 24 EIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAE--KCFSRGDSVYCKDDFFK 81
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK+WH++CLRC C+ LD SCF + +YC++DY +
Sbjct: 2 CAGCGFKIVDRYYLVAVDKAWHSECLRCDECRRPLDTALSCFARQSRIYCREDYNR 57
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRCC C L SCF+K +YC+ DYA
Sbjct: 44 CGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLKGMRLYCRHDYA 98
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|358339076|dbj|GAA47203.1| LIM/homeobox protein Lhx2 [Clonorchis sinensis]
Length = 761
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESITDKYLLQVSDKS-WHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
L C CG I +LL +SD WH +CLRCC C L SCF + ++YCK+DY
Sbjct: 110 LMLCTGCGTKIMQSHLLCLSDGELWHTECLRCCECGKSLHAEASCFNRSGSIYCKEDY 167
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|26355550|dbj|BAC41175.1| unnamed protein product [Mus musculus]
Length = 175
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 99 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 152
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CLRC C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLRCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
+E+ C C + I DK++L+V D+ WH CL+C CQ+ L DR CF + +VYCK+D+
Sbjct: 26 SEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR---CFSRAGSVYCKEDF 82
Query: 66 AK 67
K
Sbjct: 83 FK 84
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 163 HCAGCERPILDRFLLNVLDRAWHAKCVQCCECSCNLTE--KCFSRDGKLYCKMDF 215
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C + LD + +CF++D +C++DY +
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDYVR 57
>gi|27374323|gb|AAO01069.1| ap-PA [Drosophila virilis]
Length = 204
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK DY
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 203
>gi|47217859|emb|CAG02352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 235
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYA 66
E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+
Sbjct: 1 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFF 57
Query: 67 K 67
K
Sbjct: 58 K 58
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a;
Short=Islet-2A; AltName: Full=Insulin gene enhancer
protein isl-2; Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+VSD++WHA+CL+C C + L+ CF ++ ++CK
Sbjct: 57 EALLSTIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECHVQLNE--KCFARNGQLFCK 114
Query: 63 QDYAK 67
D+ K
Sbjct: 115 DDFFK 119
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 78
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 141
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C +I DK+LL V D++WHA+C+RC C+ +L CF +D +YC+ D+
Sbjct: 1 CAGCDRAILDKFLLTVLDRTWHAECVRCADCRNILAER--CFSRDGKLYCRTDF 52
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDYAK 67
C CG+ ++ L+ + DK +H +C C +C+ L ++ D+A + CK+D+ +
Sbjct: 60 CGGCGQGLSPTDLVRKARDKVYHLRCFTCALCRRQLSTGEELYLLDDARFLCKEDFIR 117
>gi|345317972|ref|XP_003429957.1| PREDICTED: hypothetical protein LOC100681317 [Ornithorhynchus
anatinus]
Length = 217
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH +CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 160 EIPLCAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQTPLTE--KCFSRGDSVYCKEDFFK 217
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|158299663|ref|XP_319730.4| AGAP008981-PA [Anopheles gambiae str. PEST]
gi|157013625|gb|EAA14878.5| AGAP008981-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
T L C C I D++ L ++ WHA CL+CCIC+ L+ SCF +D +YCK DY
Sbjct: 137 TGLDECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGANSCFSRDGNIYCKTDY 195
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + D++LL V D++WHA+C+RC C C+L CF +D +YC++D+
Sbjct: 5 CAGCERPVLDRFLLNVLDRAWHAKCVRCSDCSCRLT----EKCFTRDSKLYCREDF 56
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY++QVS +++H +CL C C L SCFI++ +YC+ DY +
Sbjct: 58 CAGCGRTIVDKYVMQVSGRNYHEECLSCAACATPLTH--SCFIRELKLYCRNDYER 111
>gi|441623345|ref|XP_003279691.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3
[Nomascus leucogenys]
Length = 419
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTE--KCFSRDGKLYCKMDF 56
>gi|62859667|ref|NP_001016720.1| ISL LIM homeobox 1 [Xenopus (Silurana) tropicalis]
Length = 135
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I DK++L+V D+ WH++CL+C CQ L CF + +VYCK+D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPL--ADKCFSRAGSVYCKEDF 82
Query: 66 AK 67
K
Sbjct: 83 FK 84
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I DK++L+V D+ WH+ CL+C CQ+ L CF + +VYCK+D+ K
Sbjct: 16 CAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFARAGSVYCKEDFFK 69
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRCC C L SCF+K +YC+ DYA
Sbjct: 3 CGGCGERVRERIVLCVGGRTWHSRCLRCCACARPLHDQHSCFLKGMRLYCRHDYA 57
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C CG I D+Y L DK WHA CL+C C L CF +D +YCK DY +
Sbjct: 181 EVNLCDGCGLKILDRYYLFAVDKRWHASCLQCSQCTRTLASEIKCFYRDGNIYCKADYQR 240
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+R C C I+ + +++ D +H C C +C VL + ++D AV+C+ Y +
Sbjct: 244 IRRCGRCHAGISPSELVMRARDTVFHVPCFSCTVCLAVLTKGDQFGMRDGAVFCQHHYQQ 303
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ + WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 40 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTR 96
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG + + ++++ DK +H QC +C C L ++D+ ++CK D+
Sbjct: 102 CNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADH 156
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF+++ YCK+ Y +
Sbjct: 26 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCYVR 82
>gi|345806125|ref|XP_003435390.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Canis lupus
familiaris]
Length = 392
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+ LL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 99 CASCGLEILDRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 152
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 30 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDY 83
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL++V D SWH CL C +C ++L SC+ + +YCKQDY +
Sbjct: 29 CEGCGQKIHDRYLMRVGDTSWHEHCLSCNVCGVLLSH--SCYTRSGKLYCKQDYDR 82
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 78 EIPLCAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 135
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +
Sbjct: 19 MLAVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSF 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>gi|122934839|gb|ABM68157.1| LHX6 [Lagothrix lagotricha]
Length = 198
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|281347117|gb|EFB22701.1| hypothetical protein PANDA_014076 [Ailuropoda melanoleuca]
Length = 369
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAER--CFSRGESVYCKDDFFK 87
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+VSD++WHA+CL+C C++ L+ CF ++ ++CK
Sbjct: 32 EVLLSTIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNE--KCFARNGQLFCK 89
Query: 63 QDYAK 67
D+ K
Sbjct: 90 DDFFK 94
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox
protein LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain
bp 655-831 [Gallus gallus]
Length = 377
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D +YCKQDY +
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCKQDYQQ 86
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V ++ WH++CL+C CQ L CF + ++VYCK+D+ K
Sbjct: 1 EIPVCAGCNQHIVDRFILKVLERHWHSKCLKCSDCQAQLAE--KCFSRGDSVYCKEDFFK 58
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D +YCKQDY +
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCKQDYQQ 86
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus
griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 32 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAER--CFSRGESVYCKDDFFK 89
>gi|91082483|ref|XP_972328.1| PREDICTED: similar to GA19074-PA [Tribolium castaneum]
gi|270007532|gb|EFA03980.1| hypothetical protein TcasGA2_TC014129 [Tribolium castaneum]
Length = 341
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
++ C CG I +++LL D+ WH CL+C C +L D SCF K + CKQDY +
Sbjct: 184 VKVCAGCGGKIVERFLLHALDRYWHNSCLKCSCCAAMLADIGTSCFTKGGMILCKQDYTR 243
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + ITD+++L+V +K+WH+ CL+C C+ QL CF + + VYCK D+ K
Sbjct: 126 CAGCDQPITDRFILKVMEKNWHSACLKCHDCLAQLT----DKCFSRGDFVYCKDDFYK 179
>gi|124111083|gb|ABM91915.1| LHX6 [Pan troglodytes]
Length = 198
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|121483796|gb|ABM54189.1| LHX6 [Pan paniscus]
gi|124054101|gb|ABM89234.1| LHX6 [Pongo pygmaeus]
Length = 198
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I DK++L+V D+ WH++CL+C CQ L CF + +VYCK+D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPL--ADKCFSRAGSVYCKEDF 82
Query: 66 AK 67
K
Sbjct: 83 FK 84
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma
floridae]
Length = 419
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF+++ YCK+ Y +
Sbjct: 15 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCYVR 71
>gi|307188339|gb|EFN73114.1| LIM domain transcription factor LMO4 [Camponotus floridanus]
Length = 230
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDY 65
T LR+C CG I +++LL D+ WH CL+C CQ+VL SC+ K + CK DY
Sbjct: 140 TGLRHCAGCGVQIVERWLLLAMDQYWHIGCLKCTYCQVVLGEIGQSCYTKSGMILCKADY 199
Query: 66 AK 67
+
Sbjct: 200 RR 201
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL++V+D SWH CL C IC + L SC+ ++ +YCK DY +
Sbjct: 44 CEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAH--SCYTRNTKLYCKADYDR 97
>gi|338720274|ref|XP_001916843.2| PREDICTED: LIM/homeobox protein Lhx6-like [Equus caballus]
Length = 239
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG++I D+++L+V D+SWH++CL C C L CF K + VYCK+D+
Sbjct: 144 CAGCGDAILDRFILKVLDRSWHSKCLMCADCNGHLS--DKCFSKGDKVYCKEDF 195
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A;
Short=Islet-2A
Length = 358
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ + WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 19 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTR 75
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG + + ++++ DK +H QC +C C L ++D+ ++CK D+
Sbjct: 81 CNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADH 135
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQD 64
+ ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKED 57
Query: 65 YAK 67
+ K
Sbjct: 58 FFK 60
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|345806127|ref|XP_548475.3| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Canis lupus
familiaris]
Length = 363
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+ LL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CASCGLEILDRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 8 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 64
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B;
Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 9 CVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDYVR 65
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix
jacchus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur
garnettii]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Ovis aries]
Length = 366
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|397496393|ref|XP_003819022.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Pan paniscus]
Length = 357
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V ++ WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 27 CAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADK---CFSRESKLYCRNDF 78
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ + ++ D+ + CK DY
Sbjct: 86 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQISTGEQLYVLDDNKFICKDDY 141
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid
feature: LIM1, bp 155 .. 307; amino acid feature: LIM2,
bp 341 .. 493 [Rattus norvegicus]
Length = 360
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|410979495|ref|XP_003996119.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Felis
catus]
Length = 309
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CLRC C L CF + E+VYCK D+ K
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLRCSDCHAPLAER--CFSRGESVYCKDDFFK 87
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 32 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|111307610|gb|AAI20881.1| Isl2 protein [Mus musculus]
gi|157423231|gb|AAI48308.2| Isl2 protein [Mus musculus]
Length = 174
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y+++V+D SWH CL CCIC L SCF + VYC+QDY +
Sbjct: 2 CEGCGLGIADRYVMRVADGSWHEDCLVCCICHAPLVH--SCFTRSGRVYCRQDYDR 55
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 31 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 87
>gi|383861320|ref|XP_003706134.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Megachile
rotundata]
Length = 402
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I+DKY++QV+ +++H +CL C C L + SCFI++ YC+ DY +
Sbjct: 58 CAGCGRTISDKYVMQVAGRNYHEECLSCAACAAPLTQ--SCFIRELKFYCRTDYER 111
>gi|126294098|ref|XP_001365314.1| PREDICTED: LIM/homeobox protein Lhx2-like [Monodelphis domestica]
Length = 408
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+C CG I+D+Y L DK WH L+C C+L+ + CF KD YCK+D+ +
Sbjct: 52 FCAGCGGKISDRYSLLAGDKQWHMLSLKCWECKLIREWEFPCFSKDGTFYCKEDFYR 108
>gi|345329744|ref|XP_001512364.2| PREDICTED: LIM/homeobox protein Lhx6 [Ornithorhynchus anatinus]
Length = 364
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 71 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQSSCYIKNKEIFCKVDY 124
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus
griseus]
Length = 401
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAER--CFSRGESVYCKDDFFK 87
>gi|326205389|dbj|BAJ84073.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
Length = 189
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ +C C I D++LL V D++WH +C++CC C+ L CF +D +YCK D+
Sbjct: 2 MAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSRDSKLYCKTDF 56
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDY 65
++ +C C I D++LL V D+SWHA+C++C C C L+ CF +D +YC+ D+
Sbjct: 2 KMVHCAGCERPILDRFLLHVLDRSWHAKCVQCTDCRCSLI----EKCFSRDGKLYCRSDF 57
Query: 66 AK 67
K
Sbjct: 58 YK 59
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 77 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 131
>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
Length = 383
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+V+ D WHA CL+C C LD +CF++D YCK+ Y +
Sbjct: 16 CVGCGNQIQDQFILRVAPDLEWHASCLKCTDCNQYLDETCTCFVRDSKTYCKRCYVR 72
>gi|301778549|ref|XP_002924694.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Ailuropoda melanoleuca]
Length = 365
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAER--CFSRGESVYCKDDFFK 87
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D+Y+L+V DK WH+QCL+C C L CF + VYCK+D+ K
Sbjct: 195 CTGCDHHIFDRYILKVQDKPWHSQCLKCNDCGRQLT--DKCFSRGSYVYCKEDFFK 248
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ E+ C C E I DK++L+V D+ WH+ CL+CC CQ+ L CF + VYCK+D
Sbjct: 32 MPKEIPRCSGCNEHILDKFILKVLDRHWHSACLKCCECQVPLAER--CFYRAGNVYCKED 89
Query: 65 YAK 67
+ K
Sbjct: 90 FFK 92
>gi|431898999|gb|ELK07369.1| LIM/homeobox protein Lhx3 [Pteropus alecto]
Length = 357
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK+D+ K
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKEDFFK 87
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I DK++L+V D+ WH++CL+C CQ L CF + +VYCK+D+
Sbjct: 25 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPL--ADKCFSRAGSVYCKEDF 82
Query: 66 AK 67
K
Sbjct: 83 FK 84
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D ++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|332025537|gb|EGI65700.1| LIM domain transcription factor LMO4 [Acromyrmex echinatior]
Length = 288
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDY 65
T LR C ACG I +++LL D+ WH CL+C C +VL SC+ K + CK DY
Sbjct: 136 TGLRQCAACGVQIVERWLLLAMDRYWHIGCLKCTYCNVVLGEIGQSCYTKSGMILCKADY 195
Query: 66 AK 67
+
Sbjct: 196 RR 197
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 83 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 137
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+V+D++WHA+CL+C C++ L CF ++ ++CK
Sbjct: 92 QVLLSTIPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLT--DKCFARNGQLFCK 149
Query: 63 QDYAK 67
+D+ K
Sbjct: 150 EDFFK 154
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTE--KCFSRDGKLYCKIDF 56
>gi|126307650|ref|XP_001371228.1| PREDICTED: LIM/homeobox protein Lhx1-like [Monodelphis domestica]
Length = 412
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 32 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 32 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|307184076|gb|EFN70611.1| Insulin gene enhancer protein ISL-1 [Camponotus floridanus]
Length = 408
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDK-SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+V+ WHA CL+C CQ LD +CF++D YCK+DY +
Sbjct: 5 CVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEKCTCFVRDGKTYCKRDYVR 61
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D ++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQD 64
YCK+D
Sbjct: 76 YCKED 80
>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
Length = 432
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDK-SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+V+ WHA CL+C CQ LD +CF++D YCK+DY +
Sbjct: 29 CVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEKCTCFVRDGKTYCKRDYVR 85
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
I + +C C I D+++L+V DKSWHA+CLRC CQ L C+ + VYCK D+
Sbjct: 87 IAHVPFCAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDK--CYSRSGQVYCKDDF 144
Query: 66 AK 67
+K
Sbjct: 145 SK 146
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ C C I D+YLL + SWH C +C IC+L L + SCF D +YCK+DY
Sbjct: 161 SQMSICQGCDYLIEDQYLLNIGGFSWHESCAKCVICRLKLQQ--SCFFSDGQLYCKKDYQ 218
Query: 67 K 67
+
Sbjct: 219 Q 219
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFK 89
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTE--KCFSRDGKLYCKMDF 56
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta
africana]
Length = 403
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYC++D+
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCREDF 87
>gi|350427425|ref|XP_003494754.1| PREDICTED: LIM domain only protein 3-like [Bombus impatiens]
Length = 220
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDYAK 67
R C CGE IT++YLL+V D WH CL+C C C+LV + PS FIK + CK+DY K
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLV-EAGPSLFIKSNLILCKKDYLK 74
>gi|340710495|ref|XP_003393823.1| PREDICTED: LIM domain only protein 3-like [Bombus terrestris]
Length = 220
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDYAK 67
R C CGE IT++YLL+V D WH CL+C C C+LV + PS FIK + CK+DY K
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLV-EAGPSLFIKSNLILCKKDYLK 74
>gi|281494552|gb|ADA72028.1| Isl1/2A [Lethenteron camtschaticum]
Length = 138
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D ++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 5 CVGCGAQIRDPFILRVSPDLEWHASCLKCAECAQYLDETCTCFVRDGKTYCKRDYVR 61
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I DK+L V D++WHA C+RCC C+ L CF ++ ++C+ D+ K
Sbjct: 5 CAGCDKPIMDKFLFNVLDRAWHADCVRCCDCRNPLQE--KCFSREAKLFCRNDFFK 58
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDK-SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
T ++ C CG++I D+YLL++ SWH+ CLRC C L H SC+ KD+ V+C+
Sbjct: 29 TTESKSESCAGCGKAIIDRYLLRIGRGLSWHSSCLRCLECDESLSSHQSCYFKDQNVFCR 88
Query: 63 QDYAK 67
+ Y++
Sbjct: 89 KCYSR 93
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 16 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 73
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix
jacchus]
Length = 402
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 87
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
Length = 407
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDK-SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+V+ WHA CL+C CQ LD +CF++D YCK+DY +
Sbjct: 5 CVGCGGRIHDQWILRVAPNLEWHAACLKCAECQQFLDEKCTCFVRDGKTYCKRDYVR 61
>gi|426223032|ref|XP_004005683.1| PREDICTED: LIM homeobox transcription factor 1-beta [Ovis aries]
Length = 405
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYG 108
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CXGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Nomascus leucogenys]
Length = 323
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG ITD+Y L +++WH++CLRC C+ LD SCF + +YC+ DY +
Sbjct: 18 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDYYR 73
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I DKYL +++D WH CL+C IC+L L +C+ K+ +YCK DY K
Sbjct: 15 CAGCGYPIRDKYLFKINDNVWHENCLQCAICRLSLS--GTCYSKNGHLYCKSDYDK 68
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQ-VSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG SI L++ V ++H C RC C VL +I+D ++C+ D+ K
Sbjct: 74 CSGCGFSINPHELVRRVYSNTYHLPCFRCVECGHVLQDGNEFYIRDGQIFCRYDHDK 130
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 54 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 108
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I E+ C C I D+++L+V DK WH+QCL+C C L CF + V+CK D
Sbjct: 275 IEAEIPKCTGCEHRIFDRFILKVQDKPWHSQCLKCNDCSAQLSE--KCFSRGNLVFCKDD 332
Query: 65 YAK 67
+ K
Sbjct: 333 FFK 335
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG+ I D+Y +++S D+ WH QCL CCIC + L++ SC++K+ +YCK DY
Sbjct: 18 CEGCGQKIKDRYFMKLSPDQYWHEQCLLCCICHIQLNQ--SCYMKNTKLYCKDDY 70
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 56 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 110
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF+++ YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYIR 83
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix
jacchus]
Length = 397
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I +++LL V D++WHAQC+ C CQ L CF +D +YC+QD+ +
Sbjct: 6 CAGCDRPIIERFLLTVLDRAWHAQCVLCVDCQAPLT--DKCFSRDGRLYCRQDFYR 59
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|195998992|ref|XP_002109364.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
gi|190587488|gb|EDV27530.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
Length = 208
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
M +++ + C C + I DK+LL+V+D WH CLRC C L + SC+IKD +Y
Sbjct: 1 MPHSLLAIKQKCTGCNQLIQDKFLLKVADDLWHEDCLRCYKCTQPLSK--SCYIKDHKLY 58
Query: 61 CKQDYAK 67
CK+DY K
Sbjct: 59 CKEDYDK 65
>gi|157119552|ref|XP_001659420.1| hypothetical protein AaeL_AAEL008690 [Aedes aegypti]
gi|108875288|gb|EAT39513.1| AAEL008690-PA, partial [Aedes aegypti]
Length = 176
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ L C C I D++ L ++ WHA CL+CCIC+ L+ SCF +D +YCK DY
Sbjct: 116 SGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDY 174
>gi|432894991|ref|XP_004076032.1| PREDICTED: LIM/homeobox protein Lhx1 [Oryzias latipes]
Length = 238
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGRLYCKNDF 55
>gi|157106396|ref|XP_001649304.1| hypothetical protein AaeL_AAEL014669 [Aedes aegypti]
gi|108868848|gb|EAT33073.1| AAEL014669-PA [Aedes aegypti]
Length = 233
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ L C C I D++ L ++ WHA CL+CCIC+ L+ SCF +D +YCK DY
Sbjct: 134 SGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDY 192
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid
feature: LIM2, bp 326 .. 481; amino acid feature: LIM1,
bp 149 ..292 [Gallus gallus]
Length = 406
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L CV CG I D ++++VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 24 LALCVGCGSQIHDPFIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 83
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I DKY + V +SWH +C++C +C+ L SCF KD +YC+QDY +
Sbjct: 53 CAGCRQPIYDKYYMWVDQRSWHEECVQCSVCRRPLVE--SCFTKDCKLYCQQDYKQ 106
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I +++ L D+ WHA CL+C C+L LD +CF KD + C++DY
Sbjct: 9 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDY 62
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK D+ K
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKDDFFK 57
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY++QV+ +++H +CL C C L SCFI++ +YC+ DY +
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLTH--SCFIRELKLYCRNDYER 111
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|328779726|ref|XP_001120677.2| PREDICTED: LIM homeobox transcription factor 1-beta-like [Apis
mellifera]
Length = 402
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY++QV+ +++H +CL C C L SCFI++ +YC+ DY +
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIH--SCFIRELKLYCRTDYER 111
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C E I+ ++L+ +H +C CC+C L F++ C++DY
Sbjct: 117 CARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYFLRQGQPICRRDY 171
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK D+ K
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKDDFFK 81
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK D+ K
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKDDFFK 81
>gi|380030211|ref|XP_003698747.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta-like [Apis florea]
Length = 402
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY++QV+ +++H +CL C C L SCFI++ +YC+ DY +
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIH--SCFIRELKLYCRTDYER 111
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D Y K+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYSKRDYIR 73
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 52 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 103
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta
africana]
Length = 401
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYC++D+
Sbjct: 30 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCREDF 85
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EVPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFK 89
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 31 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 82
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 52 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 103
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYQQ 109
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYQQ 109
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CGE++ ++ ++ V ++WH++CL+CC C L SCF+++ +YC+QDY
Sbjct: 91 CGGCGENVHERTVICVGGRTWHSKCLKCCACSKPLHDQHSCFLRNTQIYCRQDY 144
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ IT++Y L V++ +WH CL+C C+ LD SC+ + YC+ DY +
Sbjct: 92 CAGCGDLITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDYQR 147
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF+++ YCK+DY +
Sbjct: 2 CVGCGTQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYIR 58
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I DK++L+V D+ WH++CL+C C +L CF + VYCK+D+
Sbjct: 27 LQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALL--ADKCFSRAGNVYCKEDF 84
Query: 66 AK 67
K
Sbjct: 85 FK 86
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|350404759|ref|XP_003487211.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 441
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 19 ITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 95 IAERWYLKAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 143
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTE--KCFSRDGKLYCKIDF 56
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
M ++ + C C + I D+YL V DKSWH C+ C +CQ LD CF +D ++
Sbjct: 1 MIYSVAVNMTLCAGCKKPIYDRYLYHVMDKSWHGSCIVCEVCQTPLDDR--CFTRDGLIF 58
Query: 61 CKQDYAK 67
CK D+ K
Sbjct: 59 CKTDFLK 65
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
+ +++ + C C E I D+++L+V+D++WHA+CL+C C++ L CF ++ ++CK
Sbjct: 59 QVLLSTIPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLT--DKCFARNGQLFCK 116
Query: 63 QDYAK 67
+D+ K
Sbjct: 117 EDFFK 121
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 76 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 130
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGES+ ++ +L V ++WH++CL+CC C L SCF++ +YC+ DYA
Sbjct: 59 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDYA 113
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 23 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYQQ 76
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|170051196|ref|XP_001861655.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872532|gb|EDS35915.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 284
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V ++ WHA C+RCC C L CF ++ +YC+ D+
Sbjct: 108 CAGCNKPILDKFLLNVLERGWHASCVRCCECHQPLS--DKCFSRESKLYCRNDF 159
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|28195590|gb|AAO23658.1| LMX1 [Gallus gallus]
Length = 85
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCKQDY 84
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus
familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein LMX-2;
AltName: Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 16 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 71
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Xlim1; Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG SI D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 51 CVGCGGSIQDQYILRVAPDLEWHAACLKCADCCTYLDETCTCFVRDGKPYCKRDYLR 107
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V+D SWH +CL+C +CQ L SC++++ +YCK DY +
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCAVCQQPLTT--SCYLRERKLYCKHDYQQ 109
>gi|1079258|pir||S52089 transcription factor isl-2a (clone S3) - chinook salmon
Length = 91
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY
Sbjct: 3 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 57
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D+Y+L+V+ +WH +CL+C +C + L SCFI+++ ++C+ DY
Sbjct: 33 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDY 86
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 82
>gi|124013499|gb|ABM87992.1| LHX6 [Macaca nemestrina]
Length = 198
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ + CK DY
Sbjct: 70 CSSCGLXILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIXCKMDY 123
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|391334316|ref|XP_003741551.1| PREDICTED: LIM domain transcription factor LMO4-A-like
[Metaseiulus occidentalis]
Length = 189
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
R C ACG +I D+Y L D+ WH CL+C +C L D SCF K++ + C+ DY +
Sbjct: 35 RPCAACGGAIQDRYFLHAMDRYWHHSCLKCSLCATPLADIGTSCFFKNDMILCRTDYVR 93
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 11 YCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+CV CG I D+++++VS D WHA+CL+C C LD +CFI+D +C++ Y++
Sbjct: 18 FCVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSR 75
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C E I +++L++V DKSWH QC++C CQ +L CF +D +YC+ D+
Sbjct: 6 CAGCSEPIMERFLMKVLDKSWHVQCVKCSDCQCLLSE--KCFSRDNKLYCRSDF 57
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|198437781|ref|XP_002124033.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 402
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+ L V D WH CL+CC C LD +CF+KD VYC+ DY +
Sbjct: 39 CAGCHQVILDRSYLFVEDSYWHMGCLKCCACAQPLDNSRTCFVKDTRVYCRNDYKR 94
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E++YCK D+ K
Sbjct: 12 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESLYCKDDFFK 69
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 87
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTE--KCFSREGKLYCKNDF 56
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG+ I D+YL++V+D SWH CL C IC + L SC+ ++ +YCK DY +
Sbjct: 128 CEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAH--SCYTRNTKLYCKADYDR 181
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Nomascus leucogenys]
Length = 374
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 82
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRRESVYCKDDFFK 87
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V+D SWH +CL+C +CQ L SC+ ++ +YCK DY +
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTN--SCYFRERKLYCKHDYQQ 109
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D ++CKQDY +
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDYQQ 109
>gi|340721020|ref|XP_003398925.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus terrestris]
Length = 391
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 19 ITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
I +++ L+ +D++WH CLRCC C++ L +CF +D +YCK+DY +
Sbjct: 45 IAERWYLKAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D ++CKQDY +
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDYQQ 109
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D ++CKQDY +
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDYQQ 109
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D SWH +CL+C +CQ +L SC+ +D +YCK DY +
Sbjct: 33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTM--SCYSRDHKLYCKHDYQQ 86
>gi|431898835|gb|ELK07205.1| LIM homeobox transcription factor 1-beta, partial [Pteropus
alecto]
Length = 291
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 10 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYQQ 63
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 26 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 81
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C+ L DR CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDR---CFSREGRLYCKNDF 55
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D SWH +CL+C +CQ +L SC+ +D +YCK DY +
Sbjct: 31 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTM--SCYSRDHKLYCKHDYQQ 84
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C +C + I D++LL+V D+ WH +C++CC C+ L CF +D +YCK D+
Sbjct: 3 HCTSCEKPILDRFLLKVLDRPWHVKCVQCCECKCSLTE--KCFSRDGRLYCKNDF 55
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGRLYCKNDF 55
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGRLYCKNDF 55
>gi|426363578|ref|XP_004048915.1| PREDICTED: LIM/homeobox protein Lhx3 [Gorilla gorilla gorilla]
Length = 304
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 32 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|48095039|ref|XP_394342.1| PREDICTED: LIM domain only protein 3-like [Apis mellifera]
Length = 218
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRC--CICQLVLDRHPSCFIKDEAVYCKQDYAK 67
R C CGE IT++YLL+V D WH CL+C C C+LV + PS +IK + CK+DY K
Sbjct: 16 RECGGCGEVITERYLLKVLDMFWHEDCLKCNSCNCRLV-EAGPSLYIKSNLILCKKDYLK 74
>gi|158292633|ref|XP_558527.3| AGAP005137-PA [Anopheles gambiae str. PEST]
gi|157017083|gb|EAL40471.3| AGAP005137-PA [Anopheles gambiae str. PEST]
Length = 432
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG+ I D+Y +++S D+ WH QCL CCIC++ L + +C+ K+ VYCK DY
Sbjct: 19 CEGCGQKIKDRYFMKLSPDQFWHEQCLLCCICRIQLSQ--TCYTKNTKVYCKDDY 71
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+C C I D+++L+V DKSWHA+CLRC CQ L C+ + VYCK D++K
Sbjct: 92 FCAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDK--CYSRSGQVYCKDDFSK 146
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C AC I D++LL V D++WHA+C++C C+ L CF +D ++C+ D+
Sbjct: 4 CAACDRPILDRFLLNVLDRAWHAKCVQCSDCKTTLT--DKCFSRDGKLFCRNDF 55
>gi|45188105|ref|NP_984328.1| ADR232Wp [Ashbya gossypii ATCC 10895]
gi|44982922|gb|AAS52152.1| ADR232Wp [Ashbya gossypii ATCC 10895]
gi|374107543|gb|AEY96451.1| FADR232Wp [Ashbya gossypii FDAG1]
Length = 855
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 12 CVACGESITDKYLLQVSDK----SWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CGE I K + + WH +C RC +C L ++H C+I D+ +YC+Q Y
Sbjct: 701 CRSCGEKIKTKSIYSKREGELSGQWHRECFRCTVCALKFNKHVPCYILDDVIYCRQHY 758
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Sus scrofa]
Length = 402
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECXTNLSE--KCFSREGKLYCKNDF 56
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGRLYCKNDF 55
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 52
>gi|405963181|gb|EKC28778.1| LIM domain transcription factor LMO4.1 [Crassostrea gigas]
Length = 165
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
++ C CG I+D++LL ++ WH CL+C CQ L++ SCF + + CK DY
Sbjct: 18 APIKACAGCGSRISDRFLLHAMERFWHTACLKCSCCQTNLEQLGSCFTRAGMILCKNDYM 77
Query: 67 K 67
+
Sbjct: 78 R 78
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+YLL V D++WH +C+RC C+ L CF ++ ++C++D+
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTL--QDKCFSREAKLFCREDF 56
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+YLL V D++WH +C+RC C+ L CF ++ ++C++D+
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTL--QDKCFSREAKLFCREDF 56
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRC C L SCF+K +YC+ DYA
Sbjct: 42 CGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDYA 96
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 58
Query: 66 AK 67
K
Sbjct: 59 FK 60
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix
jacchus]
Length = 373
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 58
Query: 66 AK 67
K
Sbjct: 59 FK 60
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRC C L SCF+K +YC+ DYA
Sbjct: 82 CGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDYA 136
>gi|170048230|ref|XP_001870664.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870358|gb|EDS33741.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 209
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
L C C I D++ L ++ WHA CL+CC+C+ L+ SCF +D +YCK DY +
Sbjct: 151 LDECAGCDMPIQDRFYLSAVERKWHATCLQCCVCRQTLEGANSCFSRDGNIYCKTDYYR 209
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C CGE + ++ +L V ++WH++CLRC C L SCF+K +YC+ DYA
Sbjct: 42 CGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDYA 96
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|125823566|ref|XP_001339831.1| PREDICTED: LIM/homeobox protein Lhx8-like [Danio rerio]
Length = 356
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C E I D++LL+V+D WHA+CL C +CQ L +C++++ ++CK Y
Sbjct: 86 CTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHY 139
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 75 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKTDYSR 128
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Takifugu rubripes]
Length = 375
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V+D SWH +CL+C +CQ L SC+ ++ +YCK DY +
Sbjct: 33 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTT--SCYFRERKLYCKHDYQQ 86
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTE--KCFSREGKLYCKNDF 56
>gi|3319761|emb|CAA04011.1| Lhx6 protein [Mus musculus]
Length = 361
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ H +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 88 CSSCGLEILDRYLLKVNNLICHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 141
>gi|353228649|emb|CCD74820.1| hypothetical protein Smp_003280 [Schistosoma mansoni]
Length = 1008
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+C +C I DK L + +K WH CLRC C + L +CF+K++ V+C++ Y +
Sbjct: 249 HCTSCHHCIHDKLFLCMDNKYWHLNCLRCYKCGITLQWEKTCFVKNDMVFCREHYKR 305
>gi|241811701|ref|XP_002416451.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510915|gb|EEC20368.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 100
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
T C CG I D+Y+L+V + SWH CL+C +C L++ SC+ +D+ ++CK DY
Sbjct: 42 TSASLCAGCGLPIVDRYILRVMEHSWHESCLQCSVCHAPLEQ--SCYSRDKKLFCKADYD 99
Query: 67 K 67
K
Sbjct: 100 K 100
>gi|236201759|dbj|BAH58772.1| LIM homeodomain protein Hr-Lhx3 b-form [Halocynthia roretzi]
Length = 611
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
++TE+ C C I D+++L+V DK WH+Q L+C C L CF + V+CK D
Sbjct: 194 VLTEIPKCTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSE--KCFSRGNLVFCKDD 251
Query: 65 YAK 67
+ K
Sbjct: 252 FFK 254
>gi|328723694|ref|XP_001946328.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 415
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C +I D+Y+++VS +S+H +CL+C C L LDR SCF+ + +YC+QDY K
Sbjct: 39 CAKCECTIADRYIMRVSGRSYHERCLKCTTCSLKLDR--SCFVWNAKLYCRQDYDK 92
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5;
Short=xLIM-5; AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ +C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 2 MAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKTDF 56
>gi|403182403|gb|EAT47695.2| AAEL001207-PA [Aedes aegypti]
Length = 702
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
+++C CG IT+++ L D+ WH CL+C C +L D SC+ + + CK DY++
Sbjct: 74 VKHCGGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADYSR 133
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ C C I D+++L+V D++WH++CL+C CQ L C+ + VYCK+D+
Sbjct: 30 SQIPKCSGCEHPILDRFILKVQDRAWHSKCLKCTDCQAQLS--DKCYSRGGQVYCKEDFF 87
Query: 67 K 67
K
Sbjct: 88 K 88
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L CF + +VYCK+D+ K
Sbjct: 23 EIPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFARAGSVYCKEDFFK 80
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKTDYSR 116
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKTDYSR 116
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I D+YLL+V SWH +CL+C C+ L R SCF+K+ + CK DY +
Sbjct: 15 CCGCGLTIEDRYLLRVMGNSWHERCLQCDFCRAPLTR--SCFVKNGRLLCKLDYDR 68
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKTDYSR 116
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ ++ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+
Sbjct: 1 MQQIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDF 58
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+ +C C I DK+L++V DK+WH++CL C C +VL CF ++ YC +D+ K
Sbjct: 2 VSFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQ--CFTRNGKFYCSKDFEK 58
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D+ LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRLLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDK-YL-LQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG SI D+ YL +Q +DK WH QCLRC C LD+ SC++K ++C+ DY
Sbjct: 1 CAGCGRSIMDQEYLGIQKTDKKWHIQCLRCYDCNEPLDKDQSCYVKQGNIFCRTDY 56
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKTDF 56
>gi|443694942|gb|ELT95960.1| hypothetical protein CAPTEDRAFT_39289, partial [Capitella teleta]
Length = 118
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG++I D++LL+ + +SWH +CL C C + L SCF KD + CK DYA+
Sbjct: 3 CFGCGQAIADRFLLKAAGRSWHEECLSCNACGVQLT--SSCFAKDGRLLCKADYAR 56
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL V D+SWHA+C++C C+ L CF +D ++C+ D+ K
Sbjct: 6 CAGCERPILDRFLLHVLDRSWHAKCVQCSDCRCSLSE--KCFSRDGKLFCRSDFYK 59
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 78 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKTDYSR 131
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D+++L+V DK WH++CLRC C ++L C+ +D V+CK D+++
Sbjct: 119 CAGCHHPIVDRFILKVLDKPWHSKCLRCVDCDMLLT--DKCYSRDGEVFCKADFSR 172
>gi|322785895|gb|EFZ12514.1| hypothetical protein SINV_13953 [Solenopsis invicta]
Length = 144
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG +I DKY+++V+++++H +CL C C +L SCFI+D +YC+ DY +
Sbjct: 18 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSH--SCFIRDLKLYCRTDYER 71
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Takifugu rubripes]
Length = 376
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL+V+++SWH C++C +C L +C+ +D +YCK DY K
Sbjct: 32 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALT--GTCYCRDRLLYCKHDYEK 85
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+R C +C + I + +++V + +H C CC C+ L R +K+ + C+ DY K
Sbjct: 88 VRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDYEK 147
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 24 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 81
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L CF + +VYCK+D
Sbjct: 40 LGAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFSRAGSVYCKED 97
Query: 65 YAK 67
+ K
Sbjct: 98 FFK 100
>gi|449509311|ref|XP_004174248.1| PREDICTED: LIM/homeobox protein Lhx4-like [Taeniopygia guttata]
Length = 100
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
+ E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L CF + +VYCK+
Sbjct: 39 PLGAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFSRAGSVYCKE 96
Query: 64 DYAK 67
D+ K
Sbjct: 97 DFFK 100
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+YLL V D++WH +C+RC C+ L CF ++ ++C++D+
Sbjct: 5 CAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTL--QDKCFSREAKLFCREDF 56
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Xenopus (Silurana) tropicalis]
Length = 380
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+F + + C C I D++LL++SD WH QC +CC C+ L+ SCF +D+ +Y
Sbjct: 24 LFGRGMEQKWVCEGCERVICDRFLLRISDSLWHEQCAQCCTCKEPLES--SCFYRDKKLY 81
Query: 61 CKQDYAK 67
C+ DY K
Sbjct: 82 CRNDYEK 88
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQD 64
+ ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKED 57
Query: 65 YAK 67
+ K
Sbjct: 58 FFK 60
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D++LL V D++WHA+C++C C+ L CF +D +YC++D+
Sbjct: 26 CAGCERPILDRFLLNVLDRAWHAKCVQCVECRSNLT--DKCFSRDGKLYCREDF 77
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 2 FKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYC 61
+K + + C CG+ I D+++L+V ++ WH++CL+C CQ L CF + +YC
Sbjct: 44 YKKLEATIPKCAGCGDIILDRFILKVLERPWHSKCLKCSDCQAPLAN--KCFARAGHLYC 101
Query: 62 KQDYAK 67
K D+ K
Sbjct: 102 KDDFFK 107
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSE--KCFSREGKLYCKNDF 56
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG SI D++ L D WH CL+C C+L LD +C+ + +YCKQDY
Sbjct: 23 CAGCGRSIDDRFYLSAVDMCWHIGCLQCAECKLPLDTELTCYSRHGNIYCKQDY 76
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I D++LL V D+ WH +C++CC C+ L CF ++ ++CK D+
Sbjct: 2 VQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTE--KCFSREGKLFCKNDF 56
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I D++LL V D+ WH +C++CC C+ L CF ++ ++CK D+
Sbjct: 2 VQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTE--KCFSREGKLFCKNDF 56
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I D++LL V D+ WH +C++CC C+ L CF ++ ++CK D+
Sbjct: 2 VQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTE--KCFSREGKLFCKNDF 56
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V D++WHA+C+RC C+ L CF ++ ++C+ D+
Sbjct: 33 CAGCDKPILDKFLLNVLDRTWHAECVRCHDCRAAL--ADKCFSREGKLFCRNDF 84
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYA 66
E+ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+
Sbjct: 1 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFF 57
Query: 67 K 67
K
Sbjct: 58 K 58
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+V+++SWH C++C +C L +C+ +D +YCK DY K
Sbjct: 55 CAGCESPISDRFLLRVNERSWHETCVKCAVCLSTLT--GTCYCRDRLLYCKLDYEK 108
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+R C AC + I + +++V + +H C CC C+ L R +K+ + C+ DY K
Sbjct: 111 VRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYEK 170
>gi|341889206|gb|EGT45141.1| CBN-LIN-11 protein [Caenorhabditis brenneri]
Length = 372
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF KD + CK DY++
Sbjct: 75 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSKDGLILCKSDYSR 128
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTE--KCFSREGKLYCKNDF 56
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I DK+LL V D++WHA+C++C C L C+ +D + CK D+ +
Sbjct: 117 CAGCDKPIMDKFLLNVLDRAWHAECVKCADCHGTLS--DKCYSRDGKILCKPDFYR 170
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C C I D++LL+V+D WH C+RC C L SCF++D +YCK+DYA
Sbjct: 17 CAGCHRLIRDRFLLRVTDGLWHEDCVRCAACGDALTN--SCFLRDRKLYCKRDYA 69
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 15 CGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 49 CERPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 97
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oryzias latipes]
Length = 348
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
CV C ITD++LL+V+D WH +C+RC C L SCF+ + +YCK+DY+
Sbjct: 16 CVGCQRRITDRFLLRVADGLWHERCVRCAACGDALRN--SCFLLERKLYCKRDYS 68
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL+V+++SWH C++C +C L +C+ +D +YCK DY K
Sbjct: 31 CAGCESPIADRFLLRVNERSWHETCVKCAVCLSALT--GTCYSRDRLLYCKHDYEK 84
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESI-TDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+R C AC + I + +++V + +H C CC C+ L R +K+ + C+ DY K
Sbjct: 87 VRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYEK 146
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +C + I D++LL+V D+ WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 CTSCEKPILDRFLLKVLDRPWHVKCVQCCDCKCTLSE--KCFSREGKLYCKNDF 55
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK DY K
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYDYEK 88
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I ++++++ +H C CC+C+ L + +K+ + CK DY K
Sbjct: 94 CGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK DY K
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYDYEK 88
>gi|227430299|ref|NP_001153058.1| LIM homeobox 2a [Danio rerio]
gi|226434001|gb|ACO56117.1| LIM homeodomain protein 2a [Danio rerio]
Length = 320
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D++ L +++ WH +CL+C CQ L+ +CF K +YCK+DY
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDY 66
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCIC-QLVLDRHPSCFIKDEAVYCKQDY 65
C C + I DK+LL V +++WHA C+RCC C Q + D+ CF ++ +YC+ D+
Sbjct: 24 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK---CFSRESKLYCRNDF 75
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLL-QVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C CG+ I L+ + DK +H C CCIC+ L ++ D+ + CK DY
Sbjct: 83 CSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDY 138
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+ K
Sbjct: 4 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFFK 57
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK DY K
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYDYEK 88
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I ++++++ +H C CC+C+ L + +K+ + CK DY K
Sbjct: 94 CGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>gi|297289825|ref|XP_002803600.1| PREDICTED: LIM domain kinase 1-like [Macaca mulatta]
Length = 677
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 65 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 121
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C AC + I DK+LL V +++WHA C+RC C L CF ++ ++C+ D+
Sbjct: 78 CAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLT--DKCFSRENKLFCRNDF 129
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C AC + I DK+LL V +++WHA C+RC C L CF ++ ++C+ D+
Sbjct: 154 CAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLT--DKCFSRENKLFCRNDF 205
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK DY K
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYDYEK 88
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I ++++++ +H C CC+C+ L + +K+ + CK DY K
Sbjct: 94 CGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|260793702|ref|XP_002591850.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
gi|229277061|gb|EEN47861.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
Length = 329
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
++ C CG I D++LL D+ WH CL+C CQ L D SCF K + CK DY +
Sbjct: 62 VKKCAGCGGKIGDRFLLHALDRYWHVACLKCSCCQAQLGDIGSSCFSKAGMILCKTDYIR 121
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I DK++L+V D+ WH++CL+C CQ L CF + +VYCK+D+ K
Sbjct: 1 EIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPL--ADKCFSRAGSVYCKEDFFK 58
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Takifugu rubripes]
Length = 354
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL+V+D WH C+RC C L + SCF++ +YCKQDYA+
Sbjct: 7 CAGCQRPIRDRFLLRVTDCLWHEACVRCAACGDALKK--SCFVRGRKLYCKQDYAE 60
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+YLL+V D WH +CL C C+ L +CF++++ +YCK+DY K
Sbjct: 26 CEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKD--TCFLRNKTLYCKRDYQK 79
>gi|291411462|ref|XP_002722016.1| PREDICTED: LIM domain kinase 1 [Oryctolagus cuniculus]
Length = 663
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+SI D LQ WH+ C RCC C L + KD ++CK+DY
Sbjct: 35 SELPVCASCGQSICDDQYLQALSADWHSDCFRCCECSASLSHQ--YYEKDGQLFCKKDY 91
>gi|595790|gb|AAC52147.1| Kiz-1 [Mus musculus]
Length = 633
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C + L + KD ++CK+DY
Sbjct: 6 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQ--YYEKDGQLFCKKDY 62
>gi|339961229|pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
gi|339961230|pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
Length = 169
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQD 64
+ ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D
Sbjct: 3 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKED 59
Query: 65 YAK 67
+ K
Sbjct: 60 FFK 62
>gi|301769431|ref|XP_002920134.1| PREDICTED: LIM domain kinase 1-like [Ailuropoda melanoleuca]
Length = 845
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 224 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKRDY 280
>gi|291240630|ref|XP_002740222.1| PREDICTED: LIM domain only 4-like [Saccoglossus kowalevskii]
Length = 180
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67
+R C CG I D++LL D+ WH CL+C C L PSCF K + CK+DY +
Sbjct: 40 VRSCAGCGVKIMDRFLLHALDRYWHTGCLKCTCCGAQLGELGPSCFSKGGMILCKKDYLR 99
>gi|307195462|gb|EFN77348.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 60
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
C ACGES+ ++ +L V + WH++CL+C +C L SCF++ +YC+ DYA
Sbjct: 5 CGACGESVRERTVLCVGGRIWHSRCLKCSVCSRPLYDQHSCFLRGMRLYCRHDYA 59
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C +C I D++LL+V D WH QC+ C +CQ L R +CF ++ YCK DY K
Sbjct: 10 CASCQYPIEDRFLLRVMDLPWHEQCVVCSVCQTQLTR--TCFHRNRQFYCKNDYDK 63
>gi|426356555|ref|XP_004045628.1| PREDICTED: LIM domain kinase 1 [Gorilla gorilla gorilla]
Length = 633
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 50 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 106
>gi|355560570|gb|EHH17256.1| hypothetical protein EGK_13609 [Macaca mulatta]
Length = 634
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 50 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 106
>gi|355761343|gb|EHH61791.1| hypothetical protein EGM_19877 [Macaca fascicularis]
Length = 677
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 50 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 106
>gi|74202526|dbj|BAE24841.1| unnamed protein product [Mus musculus]
Length = 647
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C + L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQ--YYEKDGQLFCKKDY 76
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
+ ITE + C ACG I D+Y+ +V D+S+H CLRC CQ L CF + +YC+Q
Sbjct: 1 SSITEDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQ 60
Query: 64 DY 65
D+
Sbjct: 61 DH 62
>gi|358335730|dbj|GAA54362.1| LIM domain transcription factor LMO4-B [Clonorchis sinensis]
Length = 303
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67
C CG+ I ++ LL D+ WH CL C C L LD PS F++ + + C+QDY +
Sbjct: 5 CAGCGDPIVERTLLNALDRFWHTGCLNCSCCGLRLDELGPSVFVRSDMLLCRQDYLR 61
>gi|312074868|ref|XP_003140163.1| Lhx2 protein [Loa loa]
gi|307764674|gb|EFO23908.1| Lhx2 protein [Loa loa]
Length = 372
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
CV+C ITD++ L ++++SWH CLRCC+C L +C+ KD V C+ DY
Sbjct: 37 CVSCLIPITDQHFLLMNEQSWHYDCLRCCLCHCSLHNTSTCYYKDGMVLCRDDY 90
>gi|195119225|ref|XP_002004132.1| GI18740 [Drosophila mojavensis]
gi|193914707|gb|EDW13574.1| GI18740 [Drosophila mojavensis]
Length = 238
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
T ++ C CG+ I+D+YLL D+ WH CL+C C +L D SCF + + CK+DY
Sbjct: 72 TLIKVCGGCGDKISDRYLLYALDRYWHNSCLKCHCCGAMLADVGSSCFTRRGLILCKKDY 131
Query: 66 A 66
+
Sbjct: 132 S 132
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D++L++V SWH QC+ C C + L + SC+ + +YCK DY +
Sbjct: 33 CEGCGTKIVDRFLMRVGTSSWHEQCVTCSACGVPLAK--SCYYRHNGLYCKNDYDR 86
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D++LL+ ++SWHA CLRC CQ L CF +D A+YCK+D+
Sbjct: 32 CGGCSLPIGDRFLLKALERSWHASCLRCRDCQSPLSER--CFSRDGALYCKEDF 83
>gi|410984654|ref|XP_003998641.1| PREDICTED: LIM domain kinase 1 [Felis catus]
Length = 656
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 29 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKRDY 85
>gi|6754548|ref|NP_034847.1| LIM domain kinase 1 [Mus musculus]
gi|1708821|sp|P53668.1|LIMK1_MOUSE RecName: Full=LIM domain kinase 1; Short=LIMK-1; AltName:
Full=KIZ-1
gi|4972949|gb|AAD34858.1|AF139987_1 LIM-kinase1 [Mus musculus]
gi|9800518|gb|AAF99334.1|AF289665_1 LIMK1 [Mus musculus]
gi|1051160|emb|CAA60377.1| mLimk1 [Mus musculus]
gi|148687470|gb|EDL19417.1| LIM-domain containing, protein kinase [Mus musculus]
gi|162317928|gb|AAI56779.1| LIM-domain containing, protein kinase [synthetic construct]
Length = 647
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C + L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQ--YYEKDGQLFCKKDY 76
>gi|431898150|gb|ELK06845.1| LIM domain kinase 1 [Pteropus alecto]
Length = 662
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 6 SELPVCASCGQRIYDGQYLQALNTDWHADCFRCCECSASLSHQ--YYEKDGQLFCKKDY 62
>gi|189234898|ref|XP_967153.2| PREDICTED: similar to lim homeobox protein, partial [Tribolium
castaneum]
Length = 368
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67
C C I D++LL++ D S+H C++CC C DR H +CF+KD +YC+ DY +
Sbjct: 3 CGMCCRPINDRFLLRIMDVSYHEHCVQCCACG---DRLHHTCFVKDSKLYCRLDYDR 56
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
++ C+AC E I ++ +++ S+ +H +C C +C + L + IK ++C+ DY K
Sbjct: 59 VKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRIDYEK 118
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ ++ +YCK DY +
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTT--SCYFRERKLYCKYDYQQ 86
>gi|1432165|gb|AAB17546.1| alternatively spliced LIM-kinase1 [Homo sapiens]
gi|1657756|gb|AAC13886.1| LIM-kinase [Homo sapiens]
Length = 633
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 6 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 62
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D+ K
Sbjct: 1 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKEDFFK 54
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF +D + CK D+++
Sbjct: 68 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSRDGLILCKTDFSR 121
>gi|281339985|gb|EFB15569.1| hypothetical protein PANDA_008829 [Ailuropoda melanoleuca]
Length = 630
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 2 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKRDY 58
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ ++ +YCK DY +
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTT--SCYFRERKLYCKYDYQQ 86
>gi|403286038|ref|XP_003934314.1| PREDICTED: LIM domain kinase 1 [Saimiri boliviensis boliviensis]
Length = 651
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGRLFCKKDY 76
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +C + I D++LL+V D+ WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 CASCEKPILDRFLLKVLDRPWHIKCVQCCDCKCSLTE--KCFSREGKLYCKNDF 55
>gi|551545|gb|AAC52254.1| limk [Mus musculus]
Length = 646
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C + L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQ--YYEKDGQLFCKKDY 76
>gi|426255308|ref|XP_004021296.1| PREDICTED: LIM domain kinase 1 [Ovis aries]
Length = 608
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 5 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKKDY 61
>gi|427795151|gb|JAA63027.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 182
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
+ R C CG I D+YLL D+ WH CL+C CQ L D SCF K + C+ DY
Sbjct: 37 AQGRCCAGCGAKILDRYLLHALDRYWHNGCLKCSCCQATLADIGASCFAKAGMILCRNDY 96
Query: 66 AK 67
+
Sbjct: 97 IR 98
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CGE + ++ +L V ++WH++CLRC C L SCF + VYC+ DY +
Sbjct: 3 CGGCGERVRERTILCVGGRTWHSRCLRCSACARPLHDQHSCFQRGMRVYCRHDYDR 58
>gi|306526228|sp|Q25132.2|LHX3_HALRO RecName: Full=LIM/homeobox protein Lhx3; Short=Hr-Lhx3; Short=LIM
homeobox protein 3; AltName: Full=LIM/homeobox protein
LIM; Short=HrLIM
Length = 692
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I E+ C C I D+++L+V DK WH+Q L+C C L CF + V+CK D
Sbjct: 275 IEAEIPKCTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSE--KCFSRGNLVFCKDD 332
Query: 65 YAK 67
+ K
Sbjct: 333 FFK 335
>gi|158261347|dbj|BAF82851.1| unnamed protein product [Homo sapiens]
Length = 647
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 76
>gi|33304205|gb|AAQ02610.1| LIM domain kinase 1, partial [synthetic construct]
Length = 648
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 76
>gi|15146350|dbj|BAB62818.1| LIM homeobox 4 transcript variant [Homo sapiens]
Length = 60
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQD 64
+ ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +VYCK+D
Sbjct: 1 MQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSVYCKED 57
Query: 65 YAK 67
+ K
Sbjct: 58 FFK 60
>gi|1432164|gb|AAB17545.1| LIM-kinase1 [Homo sapiens]
gi|1657755|gb|AAC13885.1| LIM-kinase [Homo sapiens]
Length = 647
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 76
>gi|4505001|ref|NP_002305.1| LIM domain kinase 1 isoform 1 [Homo sapiens]
gi|332866745|ref|XP_001148746.2| PREDICTED: LIM domain kinase 1 isoform 1 [Pan troglodytes]
gi|90185240|sp|P53667.3|LIMK1_HUMAN RecName: Full=LIM domain kinase 1; Short=LIMK-1
gi|565280|dbj|BAA05371.1| LIM kinase [Homo sapiens]
gi|119590026|gb|EAW69620.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|119590029|gb|EAW69623.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|151554981|gb|AAI48341.1| LIM domain kinase 1 [synthetic construct]
gi|157169682|gb|AAI52983.1| LIM domain kinase 1 [synthetic construct]
gi|168279079|dbj|BAG11419.1| LIM domain kinase 1 [synthetic construct]
gi|410223988|gb|JAA09213.1| LIM domain kinase 1 [Pan troglodytes]
gi|410261992|gb|JAA18962.1| LIM domain kinase 1 [Pan troglodytes]
gi|410296294|gb|JAA26747.1| LIM domain kinase 1 [Pan troglodytes]
gi|410339893|gb|JAA38893.1| LIM domain kinase 1 [Pan troglodytes]
Length = 647
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 76
>gi|380786805|gb|AFE65278.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|383418323|gb|AFH32375.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|384947016|gb|AFI37113.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
Length = 647
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 76
>gi|440908467|gb|ELR58481.1| LIM domain kinase 1, partial [Bos grunniens mutus]
Length = 597
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 2 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKKDY 58
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + I D+++L+V D+SWHA+CL+C CQ L CF +D VYCK D+
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTD--KCFSRDGHVYCKDDF 92
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC + I D+Y+ V K WH CLRCC C+ + +CF +D + CK D+++
Sbjct: 45 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSM--TCFSRDGLILCKTDFSR 98
>gi|332634756|ref|NP_001193833.1| LIM domain kinase 1 [Bos taurus]
gi|296473062|tpg|DAA15177.1| TPA: LIM domain kinase 1 [Bos taurus]
Length = 647
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKKDY 76
>gi|393908929|gb|EJD75252.1| transcription factor protein [Loa loa]
Length = 594
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 10 RYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
R C+ C + I D ++L+VS D +HA+CL+C C+ LD + +I++ YCK+DY +
Sbjct: 191 RLCIGCLQEIRDPFVLRVSPDLEFHARCLKCEQCECYLDESCTAYIRNNKPYCKEDYIR 249
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I DKY+L+V ++ WHA+CL C C L CF ++ V+CK D+ K
Sbjct: 111 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLT--DKCFARNGHVFCKDDFFK 164
>gi|417403614|gb|JAA48606.1| Putative protein kinase [Desmodus rotundus]
Length = 647
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ--YYEKDGQLFCKKDY 76
>gi|29841053|gb|AAP06066.1| similar to NM_006769 LIM domain only 4 in Homo sapiens
[Schistosoma japonicum]
Length = 291
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRH-PSCFIKDEAVYCKQDYAK 67
C CG I +K LL D+ WH CL C C L LD PS F++ + C+QDY K
Sbjct: 5 CAGCGGPIVEKTLLNAIDRFWHTTCLNCSCCGLRLDEFGPSVFVRSNMLLCRQDYLK 61
>gi|195050615|ref|XP_001992931.1| GH13372 [Drosophila grimshawi]
gi|193899990|gb|EDV98856.1| GH13372 [Drosophila grimshawi]
Length = 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
T ++ C CG+ I+D+YLL D+ WH CL+C C +L D SCF + + CK+DY
Sbjct: 72 TLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLADVGSSCFTRRGLILCKKDY 131
Query: 66 A 66
+
Sbjct: 132 S 132
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I DKY+L+V ++ WHA+CL C C L CF ++ V+CK D+ K
Sbjct: 93 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLT--DKCFARNGHVFCKDDFFK 146
>gi|195403013|ref|XP_002060090.1| GJ14918 [Drosophila virilis]
gi|194149412|gb|EDW65107.1| GJ14918 [Drosophila virilis]
Length = 240
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDY 65
T ++ C CG+ I+D+YLL D+ WH CL+C C +L D SCF + + CK+DY
Sbjct: 72 TLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLADVGASCFTRRGLILCKKDY 131
Query: 66 A 66
+
Sbjct: 132 S 132
>gi|1708822|sp|P53669.1|LIMK1_RAT RecName: Full=LIM domain kinase 1; Short=LIMK-1
gi|1000682|dbj|BAA06672.1| LIMK-1 [Rattus norvegicus]
Length = 647
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +C +SI D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQ--YYEKDGQLFCKKDY 76
>gi|339247641|ref|XP_003375454.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316971202|gb|EFV55014.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 305
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 19 ITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
I D+++L V+ WH +CL C IC L L PSCF++D V C+ DY
Sbjct: 3 INDRFMLNVAGNFWHERCLVCSICGLELSLAPSCFLRDGKVLCRGDY 49
>gi|308220074|gb|ADO22609.1| LIM class homeobox transcription factor Lhx1.5 [Mnemiopsis
leidyi]
Length = 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+ +C C I DK+L++V DK+WH++CL C C +VL CF ++ YC +D+ K
Sbjct: 2 VSFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQ--CFTRNGKFYCSKDFEK 58
>gi|158186665|ref|NP_113915.2| LIM domain kinase 1 [Rattus norvegicus]
gi|149063093|gb|EDM13416.1| LIM motif-containing protein kinase 1, isoform CRA_a [Rattus
norvegicus]
gi|149063094|gb|EDM13417.1| LIM motif-containing protein kinase 1, isoform CRA_a [Rattus
norvegicus]
Length = 647
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +C +SI D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 20 SELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQ--YYEKDGQLFCKKDY 76
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I DKY+L+V ++ WHA+CL C C L CF ++ V+CK D+ K
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLT--DKCFARNGHVFCKDDFFK 144
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I DKY+L+V ++ WHA+CL C C L CF ++ V+CK D+ K
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLT--DKCFARNGHVFCKDDFFK 144
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I DKY+L+V ++ WHA+CL C C L CF ++ V+CK D+ K
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLT--DKCFARNGHVFCKDDFFK 144
>gi|189503044|gb|ACE06903.1| unknown [Schistosoma japonicum]
gi|226469222|emb|CAX70090.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
gi|226469224|emb|CAX70091.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
gi|226469226|emb|CAX70092.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
Length = 291
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67
C CG I +K LL D+ WH CL C C L LD PS F++ + C+QDY K
Sbjct: 5 CAGCGGPIVEKTLLNAIDRFWHTTCLNCSCCGLRLDELGPSVFVRSNMLLCRQDYLK 61
>gi|196049633|pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
gi|196049634|pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+
Sbjct: 4 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFF 61
Query: 67 K 67
K
Sbjct: 62 K 62
>gi|395536948|ref|XP_003770470.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 362
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 27 VSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 VNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 134
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+ L C C I D+Y+++V + SWH CL C +C L SC+ ++ ++CK DY
Sbjct: 54 SRLEVCAGCERPIVDRYIMKVRESSWHESCLICSVCHQHL--ATSCYSRERRIFCKNDYD 111
Query: 67 K 67
+
Sbjct: 112 R 112
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYL-LQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C AC SI L ++ D+ +H C CC C L R +++ +YC+QD+ K
Sbjct: 118 CAACTGSIAPAELVMKALDQVYHLSCFLCCTCGRQLQRGDEYVLRNGRLYCRQDFEK 174
>gi|156373115|ref|XP_001629379.1| predicted protein [Nematostella vectensis]
gi|156216378|gb|EDO37316.1| predicted protein [Nematostella vectensis]
Length = 153
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQ 63
+ +R C CGE I D++LL D+ WH CL+C C+ L SC+ K + CK
Sbjct: 12 VAASMRVCAGCGEKIIDRFLLLALDQYWHVNCLKCSCCEARLGEIGTSCYSKGGMILCKT 71
Query: 64 DYAK 67
DY +
Sbjct: 72 DYVR 75
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C +I D+Y+ V DK+WHA C++C C+ L +CF +D + C+QD+++
Sbjct: 4 CGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTE--TCFSRDGLILCRQDFSR 57
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQ-VSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY-CKQDY 65
C C ++ L++ DK +H QC +C +CQ LD +I + + CK DY
Sbjct: 63 CAGCNVALDRNDLVRRARDKVFHVQCFQCTVCQKKLDTGEQLYILNGNRFVCKHDY 118
>gi|312089567|ref|XP_003146295.1| LIM domain-containing protein [Loa loa]
gi|307758543|gb|EFO17777.1| LIM domain-containing protein [Loa loa]
Length = 141
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ L C CG I +KY++QV D WH CL CC C++ L +C+ + YCK+DY
Sbjct: 81 VAGLALCNGCGYEIKEKYMVQVDDNCWHENCLICCSCRIPLSGS-TCYSRSGQFYCKEDY 139
>gi|190613352|pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 59 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 116
>gi|355699382|gb|AES01109.1| LIM domain kinase 1 [Mustela putorius furo]
Length = 645
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ WHA C RCC C L + KD ++CK+DY
Sbjct: 19 SELPVCASCGQRIYDGQYLQALSADWHADCFRCCECSAPLSHQ--YYEKDGQLFCKRDY 75
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
++ C C I D++LL V D++WH +C++C C L C+ ++ +YC+ D+ +
Sbjct: 2 VQLCAGCDRPILDRFLLNVLDRAWHVKCVQCSDCNCTLS--DKCYSREGKLYCRTDFVR 58
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D+ K
Sbjct: 126 CGGCHELILDRFILKVLERTWHAKCLQCSECHAQLN--DKCFARNGQLFCKEDFFK 179
>gi|270002858|gb|EEZ99305.1| LIM homeobox transcription factor 1, beta 2 [Tribolium castaneum]
Length = 353
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 15 CGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67
C I D++LL++ D S+H C++CC C DR H +CF+KD +YC+ DY +
Sbjct: 2 CCRPINDRFLLRIMDVSYHEHCVQCCACG---DRLHHTCFVKDSKLYCRLDYDR 52
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
++ C+AC E I ++ +++ S+ +H +C C +C + L + IK ++C+ DY K
Sbjct: 55 VKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRIDYEK 114
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
+ TE + C ACG I D+Y+ +V D+S+H CLRC CQ L CF + +YC+Q
Sbjct: 1 SSTTEDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQ 60
Query: 64 DY 65
D+
Sbjct: 61 DH 62
>gi|268580707|ref|XP_002645336.1| C. briggsae CBR-TTX-3 protein [Caenorhabditis briggsae]
Length = 461
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
++ +C C +I DK + + K +H +CLRC +C + D + C+++D + C+ D+AK
Sbjct: 157 DINHCSFCKFAIVDKEISVLEGKYYHHRCLRCAMCDMTFDFNDKCYVRDGSFLCRADHAK 216
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+++ + C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D
Sbjct: 35 LLSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHSQLN--DKCFARNGQLFCKED 92
Query: 65 YAK 67
+ K
Sbjct: 93 FFK 95
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQ 63
+ TE + C ACG I D+Y+ +V D+S+H CLRC CQ L CF + +YC+Q
Sbjct: 1 SSTTEDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQ 60
Query: 64 DY 65
D+
Sbjct: 61 DH 62
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+++ + C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D
Sbjct: 35 LLSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKED 92
Query: 65 YAK 67
+ K
Sbjct: 93 FFK 95
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE--KCFSREGKLYCKNDF 56
>gi|268565351|ref|XP_002639418.1| C. briggsae CBR-LIM-7 protein [Caenorhabditis briggsae]
Length = 458
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 12 CVACGESITDKYLLQV-SDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I D+Y L+V D +HA CL+C C LD + + F+KD YCK DY
Sbjct: 58 CAGCRLEIADRYFLRVHPDMEFHAHCLKCAQCARPLDENQTAFVKDGHTYCKDDY 112
>gi|326925561|ref|XP_003208981.1| PREDICTED: LIM/homeobox protein Lhx8-like [Meleagris gallopavo]
Length = 290
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 24 LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
LL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 21 LLRVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 62
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C ITD+++L+V+ + WHA CL+C C LD + +CFI++ YCK+D+ +
Sbjct: 11 CAGCRCPITDQFILRVAPNLEWHASCLKCDDCNKFLDENCTCFIREGKPYCKKDFVR 67
>gi|351705380|gb|EHB08299.1| LIM domain kinase 1, partial [Heterocephalus glaber]
Length = 623
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 2 SELPICARCGQRIYDGQYLQAQNADWHADCFRCCECGASLSHQ--YYEKDGQLFCKKDY 58
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+++ + C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D
Sbjct: 35 LLSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLN--DKCFARNGQLFCKED 92
Query: 65 YAK 67
+ K
Sbjct: 93 FFK 95
>gi|156543668|ref|XP_001605174.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Nasonia
vitripennis]
Length = 419
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I DKY+++V+++++H CL CC C L C+ +D YC+ DY +
Sbjct: 59 CANCGRGIADKYVMRVNERNYHETCLSCCECSAPLSH--VCYARDCKFYCRADYQR 112
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|390480508|ref|XP_003735937.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain kinase 1-like
[Callithrix jacchus]
Length = 620
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+EL C +CG+ I D LQ + WHA C RCC C L + KD ++CK+DY
Sbjct: 78 SELPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQ--YYEKDGQLFCKKDY 134
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis
catus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D+ K
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKEDFFK 175
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVY 60
+ ++ C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +Y
Sbjct: 24 LLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLET--TCFYRDKKLY 81
Query: 61 CKQDYAK 67
CK DY K
Sbjct: 82 CKYDYEK 88
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D+ K
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKEDFFK 175
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D+ K
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKEDFFK 175
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D+ K
Sbjct: 127 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKEDFFK 180
>gi|348586684|ref|XP_003479098.1| PREDICTED: LIM domain transcription factor LMO4-like [Cavia
porcellus]
Length = 236
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAVYCKQDYAK 67
+ C CG I D++LL D WH++CL+C CQ L D SC+ K + C+ DY +
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR 79
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I D++LL+V++ SWH C++C +C+ L +C+ +D +YCK DY K
Sbjct: 60 CAGCESPIADRFLLRVNELSWHETCVKCAVCRSALSG--TCYCRDRLLYCKHDYEK 113
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
+R C AC ++I + +++V + +H C CC C+ L R +K+ + C+ DY K
Sbjct: 116 VRKCSACLQAIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRGDYEK 175
>gi|256079939|ref|XP_002576241.1| lim homeobox protein [Schistosoma mansoni]
gi|350644840|emb|CCD60434.1| lim homeobox protein,putative [Schistosoma mansoni]
Length = 192
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D YLL + +WH QC+ C IC +L H C +++E +YC+ DY K
Sbjct: 9 CAGCHQPIWDPYLLCIDHNTWHEQCVTCSICHCLL--HDKCLVRNEKLYCRNDYIK 62
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+++ + C C E I D+++L+V +++WHA+CL+C C L+ CF ++ ++CK+D
Sbjct: 35 LLSTIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLN--DKCFARNGQLFCKED 92
Query: 65 YAK 67
+ K
Sbjct: 93 FFK 95
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK Y K
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYHYEK 88
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I ++++++ +H C CC+C+ L + +K+ + CK DY K
Sbjct: 94 CGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>gi|17508249|ref|NP_491668.1| Protein LIM-7 [Caenorhabditis elegans]
gi|1658400|gb|AAB18328.1| CeLIM-7, partial [Caenorhabditis elegans]
gi|351020974|emb|CCD62964.1| Protein LIM-7 [Caenorhabditis elegans]
Length = 452
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D+Y L+V+ + +HAQCL+C C LD + + F+K+ YC+ DY +
Sbjct: 56 CAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKNGQTYCRDDYRR 112
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++LL+++D WH QC++C C+ L+ +CF +D+ +YCK Y K
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLE--TTCFYRDKKLYCKYHYEK 88
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E+I ++++++ +H C CC+C+ L + +K+ + CK DY K
Sbjct: 94 CGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I D+++L+V D++WHA+CL C C L CF ++ VYCK D+ K
Sbjct: 24 CGGCQELILDRFILKVLDRTWHAKCLNCNDCGGPLT--DKCFARNGQVYCKDDFFK 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.330 0.139 0.479
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 984,213,691
Number of Sequences: 23463169
Number of extensions: 28707427
Number of successful extensions: 79708
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2217
Number of HSP's successfully gapped in prelim test: 1135
Number of HSP's that attempted gapping in prelim test: 74172
Number of HSP's gapped (non-prelim): 5536
length of query: 67
length of database: 8,064,228,071
effective HSP length: 39
effective length of query: 28
effective length of database: 7,149,164,480
effective search space: 200176605440
effective search space used: 200176605440
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 69 (31.2 bits)