BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10221
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IRC7|AWH_DROME LIM/homeobox protein Awh OS=Drosophila melanogaster GN=Awh PE=1
SV=1
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
+ TELR C ACGE I+D++ L+V SWHA CLRCC+C LDR SCFI++ VYCK D
Sbjct: 1 MKTELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKAD 60
Query: 65 YAK 67
Y+K
Sbjct: 61 YSK 63
>sp|A2PZF9|LHX9_GLARU LIM/homeobox protein Lhx9 OS=Glandirana rugosa GN=lhx9 PE=2 SV=1
Length = 379
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 108
>sp|Q80W90|LHX9_RAT LIM/homeobox protein Lhx9 OS=Rattus norvegicus GN=Lhx9 PE=2 SV=1
Length = 388
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 117
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I+ + +++ D +H C C C L +KD VYC+ +
Sbjct: 121 VQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHF 178
>sp|A2I8Z7|LHX9_ASTFA LIM/homeobox protein Lhx9 OS=Astyanax fasciatus GN=lhx9 PE=2 SV=1
Length = 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 107
>sp|Q90881|LHX9_CHICK LIM/homeobox protein Lhx9 OS=Gallus gallus GN=LHX9 PE=2 SV=2
Length = 397
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
>sp|Q9WUH2|LHX9_MOUSE LIM/homeobox protein Lhx9 OS=Mus musculus GN=Lhx9 PE=1 SV=3
Length = 397
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I+ + +++ D +H C C C L +KD VYC+ +
Sbjct: 130 VQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHF 187
>sp|Q9NQ69|LHX9_HUMAN LIM/homeobox protein Lhx9 OS=Homo sapiens GN=LHX9 PE=1 SV=3
Length = 397
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I+ + +++ D +H C C C L +KD VYC+ +
Sbjct: 130 VQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHF 187
>sp|Q9Z0S2|LHX2_MOUSE LIM/homeobox protein Lhx2 OS=Mus musculus GN=Lhx2 PE=1 SV=1
Length = 406
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
++ C C I+ + +++ D +H C C C +L +KD VYC+
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
>sp|A0JNI8|LHX9_BOVIN LIM/homeobox protein Lhx9 OS=Bos taurus GN=LHX9 PE=2 SV=2
Length = 397
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
++ C C I+ + +++ D +H C C C L +KD VYC+ +
Sbjct: 130 VQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHF 187
>sp|Q1LWV4|LHX9_DANRE LIM/homeobox protein Lhx9 OS=Danio rerio GN=lhx9 PE=2 SV=1
Length = 396
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYR 126
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
++ C C I+ + +++ D +H C C C L +KD VYC+
Sbjct: 130 VQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
>sp|P36198|LHX2_RAT LIM/homeobox protein Lhx2 OS=Rattus norvegicus GN=Lhx2 PE=2 SV=1
Length = 426
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 9 LRYCVACGESITD-KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
++ C C I++ + +++ D +H C C C +L +KD VYC+
Sbjct: 111 VQRCARCHLGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 165
>sp|P50458|LHX2_HUMAN LIM/homeobox protein Lhx2 OS=Homo sapiens GN=LHX2 PE=2 SV=2
Length = 406
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY +
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 9 LRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK 62
++ C C I+ + +++ D +H C C C +L +KD VYC+
Sbjct: 112 VQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
>sp|Q68G74|LHX8_HUMAN LIM/homeobox protein Lhx8 OS=Homo sapiens GN=LHX8 PE=2 SV=2
Length = 356
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 128
>sp|Q68EY3|LHX9_XENLA LIM/homeobox protein Lhx9 OS=Xenopus laevis GN=lhx9 PE=2 SV=1
Length = 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C CG I+D+Y L DK WH +CL+CC C+L L+ +CF KD ++YCK+DY
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
>sp|O35652|LHX8_MOUSE LIM/homeobox protein Lhx8 OS=Mus musculus GN=Lhx8 PE=2 SV=4
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I DKYLL+V+D WH +CL C +C+ L RH SC+IKD+ ++CK DY
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 149
>sp|P53405|ISL1_DANRE Insulin gene enhancer protein isl-1 OS=Danio rerio GN=isl1 PE=2
SV=1
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P61374|ISL1_RAT Insulin gene enhancer protein ISL-1 OS=Rattus norvegicus GN=Isl1
PE=2 SV=1
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P61372|ISL1_MOUSE Insulin gene enhancer protein ISL-1 OS=Mus musculus GN=Isl1 PE=1
SV=1
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P61373|ISL1_MESAU Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus
GN=ISL1 PE=2 SV=1
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P61371|ISL1_HUMAN Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1
SV=1
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P50211|ISL1_CHICK Insulin gene enhancer protein ISL-1 OS=Gallus gallus GN=ISL1 PE=2
SV=1
Length = 349
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 12 CVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C + + ++++ K +H +C RC C L ++++ ++C+ D+
Sbjct: 79 CAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133
>sp|P29673|APTE_DROME Protein apterous OS=Drosophila melanogaster GN=ap PE=2 SV=1
Length = 469
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQD 64
I L C CG I D++ L +K WHA CL+C C+ L+R SC+ +D +YCK D
Sbjct: 141 ITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKND 200
Query: 65 Y 65
Y
Sbjct: 201 Y 201
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 RYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
R C C SI+ ++ +++ + +H C C +C L + I D +YC+ Y+
Sbjct: 208 RRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHYS 265
>sp|Q9R1R0|LHX6_MOUSE LIM/homeobox protein Lhx6 OS=Mus musculus GN=Lhx6 PE=1 SV=2
Length = 363
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ +YCK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>sp|Q9UPM6|LHX6_HUMAN LIM/homeobox protein Lhx6 OS=Homo sapiens GN=LHX6 PE=2 SV=2
Length = 363
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C +CG I D+YLL+V++ WH +CL C +C+ L + SC+IK++ ++CK DY
Sbjct: 70 CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 7 TELRYCVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+ L CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY
Sbjct: 22 SGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
Query: 66 AK 67
+
Sbjct: 82 VR 83
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 24 LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ D +H +C RC +C L ++DE + C+ D+
Sbjct: 102 VMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADHG 144
>sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 OS=Gallus gallus GN=LHX3 PE=2 SV=1
Length = 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ L CF + + VYCK+D+ K
Sbjct: 24 EIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAE--KCFSRGDGVYCKEDFFK 81
>sp|P53776|LHX4_MOUSE LIM/homeobox protein Lhx4 OS=Mus musculus GN=Lhx4 PE=1 SV=4
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 OS=Homo sapiens GN=LHX4 PE=1 SV=2
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MFKTIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVL-DRHPSCFIKDEAV 59
M + ++ C C + I DK++L+V D+ WH+ CL+C CQ+ L DR CF + +V
Sbjct: 19 MLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR---CFSRAGSV 75
Query: 60 YCKQDYAK 67
YCK+D+ K
Sbjct: 76 YCKEDFFK 83
>sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 OS=Xenopus laevis GN=lhx3 PE=1 SV=1
Length = 395
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+V D+ WH++CL+C CQ+ L CF + ++VYCK D+ K
Sbjct: 24 EIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAE--KCFSRGDSVYCKDDFFK 81
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 16 GESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
G S +D +++ D +H +C RC +C L ++DE + C+ D++
Sbjct: 95 GFSSSD-LVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEELLCRADHS 144
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 24 LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ D +H +C RC +C L ++DE + C+ D+
Sbjct: 102 VMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADHG 144
>sp|P53413|LMX1B_CHICK LIM/homeobox protein LMX-1.2 OS=Gallus gallus GN=LMX1B PE=2 SV=1
Length = 377
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C +CQ L SC+ +D +YCKQDY +
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCKQDYQQ 86
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESITD-KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 92 CSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEK 148
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 24 LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ D +H +C RC +C L ++DE + C+ D+
Sbjct: 102 VMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADHG 144
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+Y+L+V+ D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 9 CVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDYVR 65
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 24 LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66
+++ D +H +C RC +C L ++DE + C+ D+
Sbjct: 84 VMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRADHG 126
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|Q9CXV0|ISL2_MOUSE Insulin gene enhancer protein ISL-2 OS=Mus musculus GN=Isl2 PE=1
SV=2
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 12 CVACGESITDKYLLQVS-DKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
CV CG I D+++L+VS D WHA CL+C C LD +CF++D YCK+DY +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C L CF + E+VYCK D+ K
Sbjct: 27 EIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>sp|P53411|LHX1_CHICK LIM/homeobox protein Lhx1 OS=Gallus gallus GN=LHX1 PE=2 SV=1
Length = 406
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 OS=Mus musculus GN=Lhx3 PE=1 SV=1
Length = 400
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
E+ C C + I D+++L+ D+ WH++CL+C C + L CF + E+VYCK D+ K
Sbjct: 30 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>sp|Q90421|LHX3_DANRE LIM/homeobox protein Lhx3 OS=Danio rerio GN=lhx3 PE=2 SV=1
Length = 398
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C + I D+++L+V D+ WH++CL+C CQ L CF + ++VYCK D+ K
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL--ADKCFSRGDSVYCKDDFFK 81
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B
PE=1 SV=2
Length = 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b
PE=2 SV=2
Length = 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>sp|P52889|LHX5_DANRE LIM/homeobox protein Lhx5 OS=Danio rerio GN=lhx5 PE=2 SV=1
Length = 399
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WHA+C++CC C L CF +D +YCK D+
Sbjct: 4 HCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTE--KCFSRDGKLYCKIDF 56
>sp|Q60564|LMX1B_MESAU LIM homeobox transcription factor 1-beta (Fragment)
OS=Mesocricetus auratus GN=LMX1B PE=2 SV=1
Length = 369
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 12 CVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C I+D++L++V++ SWH +CL+C CQ L SC+ +D +YCKQDY +
Sbjct: 23 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDYQQ 76
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 12 CVACGESITD-KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67
C C E I +++++ + +H C CC+C+ L + +K+ + CK DY K
Sbjct: 82 CSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 138
>sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis
GN=LHX1 PE=2 SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>sp|P63007|LHX1_RAT LIM/homeobox protein Lhx1 OS=Rattus norvegicus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>sp|Q5IS44|LHX1_PANTR LIM/homeobox protein Lhx1 OS=Pan troglodytes GN=LHX1 PE=2 SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>sp|P63006|LHX1_MOUSE LIM/homeobox protein Lhx1 OS=Mus musculus GN=Lhx1 PE=1 SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
>sp|P63008|LHX1_MESAU LIM/homeobox protein Lhx1 OS=Mesocricetus auratus GN=Lhx1 PE=2
SV=1
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDY 65
+C C I D++LL V D++WH +C++CC C+ L CF ++ +YCK D+
Sbjct: 3 HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE--KCFSREGKLYCKNDF 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.139 0.479
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,770,937
Number of Sequences: 539616
Number of extensions: 709927
Number of successful extensions: 2458
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 2057
Number of HSP's gapped (non-prelim): 428
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)