Query psy10221
Match_columns 67
No_of_seqs 126 out of 1034
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 20:56:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cu8_A Cysteine-rich protein 2 99.8 1.4E-20 4.8E-25 86.9 4.6 62 4-66 4-66 (76)
2 2co8_A NEDD9 interacting prote 99.8 9.4E-21 3.2E-25 88.7 3.5 62 6-67 12-74 (82)
3 2dj7_A Actin-binding LIM prote 99.8 2.8E-20 9.5E-25 86.7 4.6 58 7-66 13-70 (80)
4 1a7i_A QCRP2 (LIM1); LIM domai 99.8 1.4E-20 4.6E-25 87.9 3.4 61 5-66 3-63 (81)
5 1wig_A KIAA1808 protein; LIM d 99.8 2.4E-20 8.2E-25 85.6 3.6 58 8-66 4-61 (73)
6 2d8x_A Protein pinch; LIM doma 99.8 5.7E-20 2E-24 83.7 4.6 58 7-66 3-60 (70)
7 1x4l_A Skeletal muscle LIM-pro 99.8 7.4E-20 2.5E-24 83.7 4.9 60 7-67 3-65 (72)
8 1x68_A FHL5 protein; four-and- 99.8 1.8E-19 6.3E-24 83.1 5.9 59 8-67 4-65 (76)
9 1j2o_A FLIN2, fusion of rhombo 99.8 4.8E-20 1.6E-24 90.7 4.0 59 8-66 2-61 (114)
10 2l4z_A DNA endonuclease RBBP8, 99.8 5.4E-20 1.8E-24 91.6 3.8 59 9-67 61-120 (123)
11 1nyp_A Pinch protein; LIM doma 99.8 6E-20 2E-24 82.8 3.6 57 8-66 4-60 (66)
12 1x61_A Thyroid receptor intera 99.8 1.6E-19 5.4E-24 82.5 4.0 59 7-66 3-62 (72)
13 2cur_A Skeletal muscle LIM-pro 99.8 1.9E-19 6.6E-24 81.7 4.2 58 7-66 3-60 (69)
14 1wyh_A SLIM 2, skeletal muscle 99.8 2E-19 6.9E-24 82.2 4.2 58 8-66 4-62 (72)
15 1x4k_A Skeletal muscle LIM-pro 99.8 2.8E-19 9.7E-24 81.6 4.7 58 8-66 4-62 (72)
16 1iml_A CRIP, cysteine rich int 99.8 2.4E-19 8.3E-24 82.7 4.1 56 10-66 1-57 (76)
17 2d8y_A Eplin protein; LIM doma 99.8 1.5E-19 5E-24 85.9 3.5 58 8-66 14-71 (91)
18 2egq_A FHL1 protein; LIM domai 99.8 3.6E-19 1.2E-23 82.3 4.6 58 8-66 14-75 (77)
19 3f6q_B LIM and senescent cell 99.8 2.6E-19 9E-24 81.6 3.7 59 7-66 9-68 (72)
20 2d8z_A Four and A half LIM dom 99.8 3.4E-19 1.1E-23 81.1 4.1 58 7-66 3-60 (70)
21 2dar_A PDZ and LIM domain prot 99.8 4E-19 1.4E-23 84.3 4.4 58 7-66 23-80 (90)
22 1x64_A Alpha-actinin-2 associa 99.8 3.8E-19 1.3E-23 84.2 4.2 58 7-66 23-80 (89)
23 2iyb_E Testin, TESS, TES; LIM 99.8 6.2E-19 2.1E-23 79.3 4.7 58 9-67 2-63 (65)
24 2cor_A Pinch protein; LIM doma 99.8 4.1E-19 1.4E-23 82.6 4.2 59 6-67 12-70 (79)
25 1g47_A Pinch protein; LIM doma 99.8 2.9E-19 9.8E-24 82.5 3.6 61 5-66 7-68 (77)
26 2xjy_A Rhombotin-2; oncoprotei 99.8 7.8E-19 2.7E-23 87.9 5.1 58 9-66 2-60 (131)
27 1m3v_A FLIN4, fusion of the LI 99.8 1.9E-19 6.4E-24 89.5 2.8 60 7-66 3-63 (122)
28 2ehe_A Four and A half LIM dom 99.8 1.1E-18 3.7E-23 81.5 5.0 59 8-67 14-73 (82)
29 2cup_A Skeletal muscle LIM-pro 99.8 2.5E-18 8.5E-23 82.9 5.6 60 7-67 3-63 (101)
30 1x62_A C-terminal LIM domain p 99.8 1.7E-19 5.9E-24 83.8 1.5 58 7-66 13-70 (79)
31 1x63_A Skeletal muscle LIM-pro 99.7 1.6E-18 5.3E-23 80.9 4.6 58 8-66 14-72 (82)
32 2dlo_A Thyroid receptor-intera 99.7 9.3E-19 3.2E-23 81.6 3.6 59 6-66 12-71 (81)
33 1x6a_A LIMK-2, LIM domain kina 99.7 8.2E-19 2.8E-23 81.7 3.3 58 8-66 14-72 (81)
34 2xqn_T Testin, TESS; metal-bin 99.7 1.5E-18 5E-23 86.5 4.3 57 9-66 3-59 (126)
35 1x3h_A Leupaxin; paxillin fami 99.7 1.7E-18 5.9E-23 80.4 4.2 57 8-66 14-70 (80)
36 2jtn_A LIM domain-binding prot 99.7 3.8E-18 1.3E-22 89.5 5.3 60 5-66 56-115 (182)
37 2cuq_A Four and A half LIM dom 99.7 2.6E-18 9E-23 79.8 4.2 58 7-66 13-70 (80)
38 1rut_X Flinc4, fusion protein 99.7 2.3E-18 7.9E-23 90.7 3.4 60 7-66 3-63 (188)
39 1v6g_A Actin binding LIM prote 99.7 1.4E-17 4.8E-22 77.6 5.7 59 8-67 14-72 (81)
40 2l3k_A Rhombotin-2, linker, LI 99.7 4.2E-18 1.4E-22 84.7 3.7 58 9-66 8-66 (123)
41 2rgt_A Fusion of LIM/homeobox 99.7 7.2E-18 2.5E-22 87.6 3.7 58 7-66 4-61 (169)
42 1b8t_A Protein (CRP1); LIM dom 99.7 1.5E-17 5.2E-22 87.8 3.9 60 6-66 4-63 (192)
43 1b8t_A Protein (CRP1); LIM dom 99.7 4.4E-17 1.5E-21 86.0 4.2 58 8-66 114-171 (192)
44 2xjy_A Rhombotin-2; oncoprotei 99.6 2.8E-16 9.6E-21 78.6 4.5 56 11-66 68-124 (131)
45 1rut_X Flinc4, fusion protein 99.6 1.1E-15 3.7E-20 80.5 4.9 57 11-67 71-128 (188)
46 2xqn_T Testin, TESS; metal-bin 99.6 1.9E-15 6.6E-20 75.2 4.3 58 8-66 62-122 (126)
47 2rgt_A Fusion of LIM/homeobox 99.5 5.8E-15 2E-19 76.6 4.1 58 9-66 65-124 (169)
48 2jtn_A LIM domain-binding prot 99.5 6.7E-15 2.3E-19 77.1 3.5 59 8-66 118-178 (182)
49 2cup_A Skeletal muscle LIM-pro 98.9 1.8E-09 6.1E-14 51.6 3.2 36 8-43 65-101 (101)
50 1zfo_A LAsp-1; LIM domain, zin 98.9 8.8E-10 3E-14 42.6 1.5 29 9-37 3-31 (31)
51 1m3v_A FLIN4, fusion of the LI 97.6 3.4E-05 1.2E-09 37.9 2.0 17 50-66 95-111 (122)
52 1j2o_A FLIN2, fusion of rhombo 96.1 0.0028 9.4E-08 30.6 1.6 57 10-66 31-103 (114)
53 2cs3_A Protein C14ORF4, MY039 89.3 0.12 4.3E-06 23.8 0.8 33 9-41 15-47 (93)
54 2ct0_A Non-SMC element 1 homol 89.2 0.24 8.1E-06 22.3 1.7 36 3-38 9-44 (74)
55 1jjd_A Metallothionein, SMTA; 88.6 0.4 1.4E-05 20.4 2.1 26 38-64 9-35 (55)
56 3nw0_A Non-structural maintena 87.9 0.37 1.3E-05 26.3 2.2 44 5-48 176-229 (238)
57 2das_A Zinc finger MYM-type pr 85.9 0.69 2.4E-05 20.0 2.1 27 36-62 20-48 (62)
58 2gvi_A Conserved hypothetical 84.8 0.31 1.1E-05 26.0 0.9 30 36-66 172-201 (204)
59 1chc_A Equine herpes virus-1 r 84.1 0.7 2.4E-05 19.6 1.8 42 7-48 3-52 (68)
60 2ds5_A CLPX, ATP-dependent CLP 82.2 1.4 4.9E-05 18.3 2.3 27 38-64 13-39 (51)
61 1ovx_A ATP-dependent CLP prote 82.2 1.3 4.6E-05 19.6 2.3 11 38-48 20-30 (67)
62 2dmj_A Poly (ADP-ribose) polym 81.8 0.82 2.8E-05 21.9 1.6 31 8-38 24-65 (106)
63 1v9x_A Poly (ADP-ribose) polym 80.4 1.6 5.4E-05 21.2 2.4 32 7-38 18-60 (114)
64 3odc_A Poly [ADP-ribose] polym 75.8 1.4 4.8E-05 21.3 1.4 17 7-23 17-33 (111)
65 3od8_A Poly [ADP-ribose] polym 75.8 1.3 4.6E-05 21.6 1.4 33 7-39 36-79 (116)
66 2ecm_A Ring finger and CHY zin 72.7 3.9 0.00013 16.3 2.7 30 8-37 4-36 (55)
67 1x4j_A Ring finger protein 38; 71.5 4.7 0.00016 17.3 2.6 30 8-37 22-53 (75)
68 1uw0_A DNA ligase III; DNA rep 70.7 2 6.9E-05 20.9 1.3 17 7-23 13-29 (117)
69 2e5r_A Dystrobrevin alpha; ZZ 70.2 0.94 3.2E-05 19.6 0.1 14 30-45 7-20 (63)
70 2d8v_A Zinc finger FYVE domain 69.9 0.93 3.2E-05 20.0 0.0 11 55-65 25-35 (67)
71 2djb_A Polycomb group ring fin 69.7 4 0.00014 17.5 2.1 40 9-48 15-62 (72)
72 2ecl_A Ring-box protein 2; RNF 69.7 5.7 0.00019 17.6 2.7 32 7-38 13-58 (81)
73 2eqg_A Tumor necrosis factor, 68.2 0.72 2.5E-05 18.7 -0.5 16 52-67 22-37 (49)
74 2lbz_A Thuricin17, thurincin H 68.0 2.5 8.6E-05 15.2 1.0 13 35-47 6-18 (31)
75 2xeu_A Ring finger protein 4; 67.8 2.7 9.4E-05 17.3 1.3 41 9-49 3-57 (64)
76 2vpb_A Hpygo1, pygopus homolog 66.9 4.6 0.00016 17.5 2.0 31 7-37 6-40 (65)
77 2lo3_A SAGA-associated factor 66.9 1.3 4.6E-05 17.7 0.2 13 10-22 18-30 (44)
78 3ng2_A RNF4, snurf, ring finge 61.7 3.9 0.00013 17.2 1.2 42 7-48 8-63 (71)
79 2yrc_A Protein transport prote 61.1 9.1 0.00031 16.3 2.7 37 4-45 4-42 (59)
80 1znf_A 31ST zinc finger from X 59.5 4.5 0.00015 12.7 1.1 12 37-48 2-13 (27)
81 2ea6_A Ring finger protein 4; 59.2 3.9 0.00013 17.1 1.0 30 8-37 14-49 (69)
82 2ect_A Ring finger protein 126 59.2 10 0.00035 16.3 3.9 41 8-48 14-64 (78)
83 2d8t_A Dactylidin, ring finger 58.2 9.3 0.00032 16.2 2.2 29 8-37 14-42 (71)
84 4ap4_A E3 ubiquitin ligase RNF 57.6 6.1 0.00021 18.7 1.7 41 8-48 6-60 (133)
85 2kiz_A E3 ubiquitin-protein li 57.6 10 0.00035 15.8 2.7 40 8-47 13-62 (69)
86 2ep4_A Ring finger protein 24; 56.9 11 0.00038 16.0 2.5 40 9-48 15-64 (74)
87 1ard_A Yeast transcription fac 56.7 5.2 0.00018 12.8 1.0 12 37-48 3-14 (29)
88 2ecn_A Ring finger protein 141 55.8 6.6 0.00023 16.5 1.5 38 9-48 15-60 (70)
89 3d00_A Tungsten formylmethanof 54.4 2.7 9.1E-05 22.2 0.0 25 35-66 162-186 (191)
90 2kvh_A Zinc finger and BTB dom 54.4 4.1 0.00014 13.0 0.5 12 37-48 4-15 (27)
91 2ecy_A TNF receptor-associated 54.3 8.4 0.00029 16.0 1.7 27 9-36 15-41 (66)
92 2y43_A E3 ubiquitin-protein li 52.9 7 0.00024 17.8 1.4 38 10-47 23-68 (99)
93 1paa_A Yeast transcription fac 52.7 6.6 0.00023 12.6 1.0 12 37-48 3-14 (30)
94 1wjv_A Cell growth regulating 51.6 0.52 1.8E-05 21.5 -2.6 38 11-48 12-49 (79)
95 2ctu_A Zinc finger protein 483 50.3 4.3 0.00015 16.7 0.4 33 10-48 19-51 (73)
96 1klr_A Zinc finger Y-chromosom 50.2 7.6 0.00026 12.3 1.0 12 37-48 3-14 (30)
97 3mhs_E SAGA-associated factor 49.9 3.5 0.00012 19.5 0.1 15 8-22 74-88 (96)
98 2m0e_A Zinc finger and BTB dom 49.8 7.9 0.00027 12.2 1.2 12 37-48 3-14 (29)
99 4av1_A Poly [ADP-ribose] polym 49.1 8.3 0.00028 20.9 1.4 33 7-39 37-80 (223)
100 2kvf_A Zinc finger and BTB dom 49.0 5.8 0.0002 12.6 0.6 12 37-48 4-15 (28)
101 2csy_A Zinc finger protein 183 48.7 16 0.00055 15.8 2.2 38 9-47 15-60 (81)
102 2m0f_A Zinc finger and BTB dom 48.3 5.9 0.0002 12.6 0.6 11 37-47 3-13 (29)
103 2m0d_A Zinc finger and BTB dom 47.4 6.2 0.00021 12.6 0.6 12 37-48 4-15 (30)
104 1rik_A E6APC1 peptide; E6-bind 47.4 6.4 0.00022 12.6 0.6 12 37-48 3-14 (29)
105 2l0b_A E3 ubiquitin-protein li 46.9 19 0.00067 16.1 2.4 28 10-37 41-70 (91)
106 2lvu_A Zinc finger and BTB dom 52.6 4.1 0.00014 12.8 0.0 12 37-48 3-14 (26)
107 3asl_A E3 ubiquitin-protein li 46.0 17 0.00058 15.8 2.0 28 11-38 20-49 (70)
108 3fl2_A E3 ubiquitin-protein li 45.8 14 0.00047 17.6 1.8 38 10-48 53-99 (124)
109 4ayc_A E3 ubiquitin-protein li 45.2 15 0.0005 17.9 1.9 36 11-47 55-98 (138)
110 2e6s_A E3 ubiquitin-protein li 45.2 19 0.00066 16.0 2.1 28 11-38 28-57 (77)
111 2elr_A Zinc finger protein 406 45.2 9.9 0.00034 12.9 1.0 12 37-48 10-21 (36)
112 2kvg_A Zinc finger and BTB dom 45.0 5.9 0.0002 12.7 0.3 11 37-47 4-14 (27)
113 2xb1_A Pygopus homolog 2, B-ce 44.7 23 0.00078 16.7 2.4 29 9-37 3-35 (105)
114 1p7a_A BF3, BKLF, kruppel-like 44.4 10 0.00034 13.1 1.0 12 37-48 12-23 (37)
115 1f62_A Transcription factor WS 44.2 12 0.00041 14.9 1.3 28 11-38 2-31 (51)
116 2lvr_A Zinc finger and BTB dom 50.1 4.8 0.00016 13.0 0.0 12 37-48 4-15 (30)
117 2jny_A Uncharacterized BCR; st 43.1 11 0.00038 16.5 1.1 14 7-20 8-21 (67)
118 1rim_A E6APC2 peptide; E6-bind 43.0 11 0.00037 12.8 1.0 12 37-48 3-14 (33)
119 2ysm_A Myeloid/lymphoid or mix 42.7 22 0.00074 16.7 2.2 8 30-37 77-84 (111)
120 2hqh_E Restin; beta/BETA struc 42.7 5.8 0.0002 14.1 0.1 8 57-64 2-9 (26)
121 2fqh_A Hypothetical protein TA 42.6 18 0.00062 17.2 1.8 11 11-21 19-29 (109)
122 2elx_A Zinc finger protein 406 42.4 8 0.00027 13.1 0.5 12 37-48 8-19 (35)
123 2ckl_A Polycomb group ring fin 42.4 19 0.00066 16.6 2.0 40 9-48 15-62 (108)
124 1srk_A Zinc finger protein ZFP 41.9 8.2 0.00028 13.1 0.5 12 37-48 8-19 (35)
125 2hf1_A Tetraacyldisaccharide-1 41.9 12 0.00041 16.4 1.1 11 10-20 9-19 (68)
126 3hct_A TNF receptor-associated 41.5 21 0.00071 16.8 2.1 38 10-48 19-65 (118)
127 2kq9_A DNAK suppressor protein 41.3 1.4 4.8E-05 21.2 -2.1 13 9-21 81-93 (112)
128 2js4_A UPF0434 protein BB2007; 40.7 11 0.00039 16.6 1.0 13 8-20 7-19 (70)
129 2lvt_A Zinc finger and BTB dom 46.8 5.8 0.0002 12.8 0.0 12 37-48 3-14 (29)
130 2jr6_A UPF0434 protein NMA0874 40.5 13 0.00045 16.3 1.2 13 8-20 7-19 (68)
131 1twf_J DNA-directed RNA polyme 40.4 12 0.0004 16.7 1.0 12 37-48 5-16 (70)
132 2jvx_A NF-kappa-B essential mo 40.2 9.3 0.00032 13.8 0.5 12 37-48 4-15 (28)
133 1fv5_A First zinc finger of U- 39.7 9.8 0.00034 14.1 0.6 13 36-48 8-20 (36)
134 2elq_A Zinc finger protein 406 39.2 10 0.00034 13.0 0.6 12 37-48 10-21 (36)
135 2xzf_A Formamidopyrimidine-DNA 39.0 9.2 0.00031 21.2 0.6 11 10-20 243-253 (271)
136 1ee8_A MUTM (FPG) protein; bet 38.8 9.7 0.00033 21.1 0.7 11 10-20 236-246 (266)
137 2dip_A Zinc finger SWIM domain 38.5 8 0.00027 18.2 0.3 35 31-66 27-63 (98)
138 2yte_A Zinc finger protein 473 38.5 14 0.00049 13.1 1.0 12 37-48 11-22 (42)
139 1k82_A Formamidopyrimidine-DNA 38.2 9.6 0.00033 21.1 0.6 10 11-20 242-251 (268)
140 3j21_V 50S ribosomal protein L 37.9 24 0.00083 15.4 1.8 26 8-33 3-31 (66)
141 2elo_A Zinc finger protein 406 37.8 10 0.00036 13.0 0.6 12 37-48 10-21 (37)
142 1iym_A EL5; ring-H2 finger, ub 37.8 22 0.00076 13.9 1.9 30 8-37 4-36 (55)
143 1k3x_A Endonuclease VIII; hydr 37.0 10 0.00035 20.9 0.6 10 11-20 236-245 (262)
144 2yt5_A Metal-response element- 36.7 27 0.00094 14.6 2.8 31 8-38 5-39 (66)
145 2en7_A Zinc finger protein 268 36.7 15 0.00051 13.2 1.0 13 36-48 12-24 (44)
146 3u6p_A Formamidopyrimidine-DNA 36.5 11 0.00036 21.0 0.6 9 11-19 247-255 (273)
147 2ytb_A Zinc finger protein 32; 36.5 16 0.00053 13.0 1.0 13 36-48 11-23 (42)
148 3shb_A E3 ubiquitin-protein li 36.3 27 0.00092 15.6 1.9 27 12-38 29-57 (77)
149 2eos_A B-cell lymphoma 6 prote 36.1 16 0.00056 13.0 1.0 12 37-48 12-23 (42)
150 2kwj_A Zinc finger protein DPF 36.1 28 0.00097 16.5 2.0 12 34-45 56-67 (114)
151 2elm_A Zinc finger protein 406 36.0 8.9 0.0003 13.4 0.2 11 37-47 10-20 (37)
152 2ckl_B Ubiquitin ligase protei 35.8 23 0.00078 17.7 1.8 37 11-47 56-101 (165)
153 2elp_A Zinc finger protein 406 35.8 12 0.00039 12.9 0.5 13 36-48 9-21 (37)
154 2elt_A Zinc finger protein 406 35.6 12 0.00041 12.7 0.5 12 37-48 10-21 (36)
155 2elv_A Zinc finger protein 406 35.4 12 0.00041 12.8 0.5 12 37-48 10-21 (36)
156 2kfq_A FP1; protein, de novo p 35.2 11 0.00037 12.7 0.4 10 37-46 3-12 (32)
157 2ysl_A Tripartite motif-contai 35.2 29 0.00099 14.4 2.6 27 9-36 20-46 (73)
158 2enf_A Zinc finger protein 347 34.6 18 0.00062 13.2 1.1 13 36-48 12-24 (46)
159 2emg_A Zinc finger protein 484 34.6 18 0.00061 13.2 1.0 13 36-48 12-24 (46)
160 2els_A Zinc finger protein 406 34.6 12 0.00042 12.7 0.5 12 37-48 10-21 (36)
161 1njq_A Superman protein; zinc- 34.6 12 0.00042 13.1 0.5 12 37-48 7-18 (39)
162 1tot_A CREB-binding protein; z 34.0 7.7 0.00026 16.0 -0.1 8 11-18 8-15 (52)
163 1wd2_A Ariadne-1 protein homol 33.8 21 0.00072 15.0 1.2 17 6-22 3-19 (60)
164 2em6_A Zinc finger protein 224 33.7 19 0.00065 13.2 1.1 13 36-48 12-24 (46)
165 2pk7_A Uncharacterized protein 33.6 14 0.00049 16.2 0.7 12 9-20 8-19 (69)
166 2ely_A Zinc finger protein 224 33.6 22 0.00077 12.9 1.3 15 36-50 12-26 (46)
167 2eon_A ZFP-95, zinc finger pro 33.5 19 0.00066 13.2 1.1 13 36-48 12-24 (46)
168 2eq2_A Zinc finger protein 347 33.4 18 0.00062 13.2 1.0 13 36-48 12-24 (46)
169 2i5o_A DNA polymerase ETA; zin 33.4 11 0.00038 14.7 0.3 13 10-22 10-22 (39)
170 3cw2_K Translation initiation 33.4 33 0.0011 17.2 2.1 16 5-20 99-114 (139)
171 2epc_A Zinc finger protein 32; 33.1 14 0.00046 13.2 0.5 12 37-48 12-23 (42)
172 2ep1_A Zinc finger protein 484 33.1 19 0.00063 13.1 1.0 13 36-48 12-24 (46)
173 1z6u_A NP95-like ring finger p 33.1 28 0.00096 17.3 1.8 38 10-48 79-125 (150)
174 2en9_A Zinc finger protein 28 32.5 20 0.00069 13.1 1.0 13 36-48 12-24 (46)
175 2yti_A Zinc finger protein 347 32.3 19 0.00066 13.1 1.0 13 36-48 12-24 (46)
176 2eov_A Zinc finger protein 484 32.0 21 0.00072 12.9 1.1 13 36-48 12-24 (46)
177 2el5_A Zinc finger protein 268 31.9 15 0.0005 13.1 0.5 13 36-48 10-22 (42)
178 2eop_A Zinc finger protein 268 31.9 21 0.00071 13.0 1.0 13 36-48 12-24 (46)
179 1loi_A Cyclic 3',5'-AMP specif 31.8 8.3 0.00028 13.2 -0.2 10 37-46 6-15 (26)
180 2d8s_A Cellular modulator of i 31.7 39 0.0013 14.9 2.0 40 8-47 14-69 (80)
181 2enh_A Zinc finger protein 28 31.7 21 0.00072 13.0 1.0 13 36-48 12-24 (46)
182 2yth_A Zinc finger protein 224 31.6 21 0.00072 13.0 1.0 13 36-48 12-24 (46)
183 2eq1_A Zinc finger protein 347 31.5 20 0.00068 13.1 0.9 13 36-48 12-24 (46)
184 2eof_A Zinc finger protein 268 31.5 15 0.00052 13.2 0.6 13 36-48 12-24 (44)
185 2emk_A Zinc finger protein 28 31.3 23 0.00078 12.9 1.1 13 36-48 12-24 (46)
186 1jm7_A BRCA1, breast cancer ty 31.1 29 0.00099 15.9 1.6 38 10-48 22-70 (112)
187 2ytn_A Zinc finger protein 347 31.1 22 0.00075 12.9 1.0 13 36-48 12-24 (46)
188 3dpl_R Ring-box protein 1; ubi 31.1 37 0.0013 15.9 2.0 14 8-21 36-49 (106)
189 2eoh_A Zinc finger protein 28 31.1 21 0.00072 13.0 1.0 13 36-48 12-24 (46)
190 2emb_A Zinc finger protein 473 31.0 16 0.00054 13.2 0.6 13 36-48 12-24 (44)
191 2elz_A Zinc finger protein 224 31.0 22 0.00077 12.9 1.1 13 36-48 12-24 (46)
192 2yrm_A B-cell lymphoma 6 prote 31.0 22 0.00075 12.8 1.0 12 37-48 11-22 (43)
193 2epv_A Zinc finger protein 268 31.0 15 0.00053 13.3 0.5 13 36-48 12-24 (44)
194 3j20_Y 30S ribosomal protein S 30.9 19 0.00066 14.7 0.8 10 55-64 34-43 (50)
195 1u5k_A Hypothetical protein; O 30.9 23 0.00079 19.0 1.4 10 9-18 150-159 (244)
196 2eom_A ZFP-95, zinc finger pro 30.8 21 0.00073 13.1 1.0 13 36-48 12-24 (46)
197 2eoj_A Zinc finger protein 268 30.8 16 0.00054 13.2 0.6 13 36-48 12-24 (44)
198 2eou_A Zinc finger protein 473 30.7 21 0.00072 12.9 0.9 12 37-48 13-24 (44)
199 1vq8_U 50S ribosomal protein L 30.7 27 0.00092 15.3 1.3 25 9-33 3-30 (66)
200 2eoq_A Zinc finger protein 224 30.7 22 0.00074 13.0 1.0 13 36-48 12-24 (46)
201 2en2_A B-cell lymphoma 6 prote 30.6 16 0.00053 13.0 0.5 13 36-48 11-23 (42)
202 2yu5_A Zinc finger protein 473 30.1 16 0.00056 13.2 0.5 12 37-48 13-24 (44)
203 1jm7_B BARD1, BRCA1-associated 30.1 44 0.0015 15.6 2.2 39 9-47 22-66 (117)
204 2eq4_A Zinc finger protein 224 30.0 24 0.00081 12.8 1.1 12 37-48 13-24 (46)
205 2em0_A Zinc finger protein 224 29.9 23 0.00077 12.9 1.0 13 36-48 12-24 (46)
206 2epx_A Zinc finger protein 28 29.8 23 0.0008 12.8 1.0 13 36-48 12-24 (47)
207 2ytq_A Zinc finger protein 268 29.8 25 0.00086 12.8 1.1 13 36-48 12-24 (46)
208 2ytf_A Zinc finger protein 268 29.5 17 0.00058 13.3 0.5 13 36-48 12-24 (46)
209 2epz_A Zinc finger protein 28 29.4 24 0.00081 12.8 1.0 13 36-48 12-24 (46)
210 2eoo_A ZFP-95, zinc finger pro 29.3 17 0.00059 13.3 0.5 13 36-48 12-24 (46)
211 2yts_A Zinc finger protein 484 29.1 17 0.00059 13.2 0.5 13 36-48 12-24 (46)
212 2ep3_A Zinc finger protein 484 29.1 17 0.00059 13.3 0.5 13 36-48 12-24 (46)
213 2d8q_A BLU protein, zinc finge 29.1 33 0.0011 14.9 1.5 16 2-17 8-23 (70)
214 2emz_A ZFP-95, zinc finger pro 29.1 24 0.00081 12.9 1.0 13 36-48 12-24 (46)
215 1k81_A EIF-2-beta, probable tr 28.9 23 0.00079 13.3 0.9 27 11-43 2-28 (36)
216 1weo_A Cellulose synthase, cat 28.8 52 0.0018 15.4 2.2 13 8-20 15-27 (93)
217 2emx_A Zinc finger protein 268 28.8 18 0.00061 13.1 0.5 12 37-48 11-22 (44)
218 2csz_A Synaptotagmin-like prot 28.8 42 0.0014 15.1 1.8 15 6-20 22-36 (76)
219 2ept_A Zinc finger protein 32; 28.7 18 0.00061 12.8 0.5 12 37-48 11-22 (41)
220 2ytr_A Zinc finger protein 347 28.6 24 0.00082 12.8 0.9 13 36-48 12-24 (46)
221 3iuf_A Zinc finger protein UBI 28.6 17 0.0006 13.7 0.5 11 37-47 8-18 (48)
222 2eoy_A Zinc finger protein 473 28.6 18 0.00061 13.3 0.5 12 37-48 13-24 (46)
223 2en3_A ZFP-95, zinc finger pro 28.4 18 0.00062 13.2 0.5 12 37-48 13-24 (46)
224 2eow_A Zinc finger protein 347 28.3 18 0.00062 13.2 0.5 12 37-48 13-24 (46)
225 3efo_B SEC24 related gene fami 28.2 46 0.0016 21.4 2.5 33 8-45 97-129 (770)
226 2em3_A Zinc finger protein 28 28.1 18 0.00063 13.2 0.5 13 36-48 12-24 (46)
227 2e6r_A Jumonji/ARID domain-con 28.1 50 0.0017 15.1 2.1 29 10-38 17-47 (92)
228 2yql_A PHD finger protein 21A; 28.0 39 0.0013 13.7 2.3 29 7-38 7-37 (56)
229 2ytm_A Zinc finger protein 28 27.9 26 0.00089 12.8 1.0 13 36-48 12-24 (46)
230 2ecj_A Tripartite motif-contai 27.8 23 0.00079 13.9 0.9 14 9-22 15-28 (58)
231 2yrj_A Zinc finger protein 473 27.8 19 0.00064 13.1 0.5 13 36-48 12-24 (46)
232 2eps_A POZ-, at HOOK-, and zin 27.7 26 0.00089 13.5 1.0 39 9-47 12-52 (54)
233 2emi_A Zinc finger protein 484 27.7 19 0.00065 13.1 0.5 12 37-48 13-24 (46)
234 2eml_A Zinc finger protein 28 27.5 19 0.00065 13.1 0.5 12 37-48 13-24 (46)
235 3ql9_A Transcriptional regulat 27.5 23 0.0008 17.5 0.9 36 8-46 7-44 (129)
236 3eh2_A Protein transport prote 27.5 48 0.0017 21.3 2.5 33 8-45 93-125 (766)
237 2eor_A Zinc finger protein 224 27.4 19 0.00065 13.1 0.5 13 36-48 12-24 (46)
238 2eq3_A Zinc finger protein 347 27.4 20 0.00067 13.0 0.6 13 36-48 12-24 (46)
239 3ny3_A E3 ubiquitin-protein li 27.2 50 0.0017 14.7 1.9 10 14-23 6-15 (75)
240 2epw_A Zinc finger protein 268 27.2 20 0.00067 13.0 0.5 12 37-48 13-24 (46)
241 2em7_A Zinc finger protein 224 27.1 20 0.0007 13.0 0.6 13 36-48 12-24 (46)
242 2el6_A Zinc finger protein 268 27.1 20 0.00068 13.1 0.5 13 36-48 12-24 (46)
243 2emh_A Zinc finger protein 484 26.9 20 0.00067 13.1 0.5 13 36-48 12-24 (46)
244 2yto_A Zinc finger protein 484 26.8 20 0.00069 13.1 0.5 13 36-48 12-24 (46)
245 2ytj_A Zinc finger protein 484 26.7 20 0.00069 13.0 0.5 13 36-48 12-24 (46)
246 2el4_A Zinc finger protein 268 26.6 20 0.0007 13.0 0.5 12 37-48 13-24 (46)
247 2emj_A Zinc finger protein 28 26.6 20 0.0007 13.1 0.5 13 36-48 12-24 (46)
248 2emy_A Zinc finger protein 268 26.5 20 0.0007 13.0 0.5 13 36-48 12-24 (46)
249 2ytt_A Zinc finger protein 473 26.5 28 0.00096 12.6 1.0 13 36-48 12-24 (46)
250 2ep2_A Zinc finger protein 484 26.5 21 0.0007 13.0 0.5 13 36-48 12-24 (46)
251 2em4_A Zinc finger protein 28 26.4 21 0.00071 13.1 0.5 13 36-48 12-24 (46)
252 2yu8_A Zinc finger protein 347 26.4 21 0.00071 13.0 0.5 13 36-48 12-24 (46)
253 2l8e_A Polyhomeotic-like prote 26.3 18 0.00062 14.8 0.4 12 10-21 19-30 (49)
254 2ytp_A Zinc finger protein 484 26.3 21 0.00071 13.1 0.5 12 37-48 13-24 (46)
255 2emf_A Zinc finger protein 484 26.2 22 0.00074 13.0 0.6 12 37-48 13-24 (46)
256 3lrq_A E3 ubiquitin-protein li 26.1 40 0.0014 15.3 1.6 39 10-48 23-70 (100)
257 2eox_A Zinc finger protein 473 26.0 18 0.0006 13.1 0.3 13 36-48 12-24 (44)
258 2eq0_A Zinc finger protein 347 25.9 21 0.00072 13.0 0.5 13 36-48 12-24 (46)
259 3h4n_A Cytochrome C7, cytochro 25.8 4.1 0.00014 17.9 -1.8 11 11-21 27-37 (72)
260 2emp_A Zinc finger protein 347 25.8 22 0.00077 12.9 0.6 13 36-48 12-24 (46)
261 2em2_A Zinc finger protein 28 25.6 22 0.00075 13.0 0.5 13 36-48 12-24 (46)
262 2em5_A ZFP-95, zinc finger pro 25.6 22 0.00075 13.0 0.5 13 36-48 12-24 (46)
263 2yso_A ZFP-95, zinc finger pro 25.6 21 0.00073 13.0 0.5 13 36-48 12-24 (46)
264 2eme_A Zinc finger protein 473 25.5 22 0.00075 12.9 0.5 13 36-48 12-24 (46)
265 2eoe_A Zinc finger protein 347 25.3 23 0.00077 12.9 0.6 13 36-48 12-24 (46)
266 2enc_A Zinc finger protein 224 25.2 22 0.00076 12.9 0.5 13 36-48 12-24 (46)
267 2emm_A ZFP-95, zinc finger pro 25.1 23 0.00077 12.9 0.5 13 36-48 12-24 (46)
268 2lv2_A Insulinoma-associated p 25.0 31 0.0011 15.3 1.1 11 11-21 30-40 (85)
269 2en8_A Zinc finger protein 224 25.0 22 0.00076 12.9 0.5 12 37-48 13-24 (46)
270 2ytg_A ZFP-95, zinc finger pro 25.0 22 0.00076 12.9 0.5 13 36-48 12-24 (46)
271 1dl6_A Transcription factor II 24.9 32 0.0011 14.3 1.0 12 37-48 31-42 (58)
272 2ene_A Zinc finger protein 347 24.8 23 0.00079 12.9 0.5 13 36-48 12-24 (46)
273 1kbe_A Kinase suppressor of RA 24.8 46 0.0016 13.4 1.8 11 10-20 15-25 (49)
274 2em8_A Zinc finger protein 224 24.6 23 0.0008 12.9 0.5 13 36-48 12-24 (46)
275 3e2u_E CAP-Gly domain-containi 24.6 18 0.0006 14.4 0.1 10 55-64 17-26 (42)
276 2epu_A Zinc finger protein 32; 24.6 19 0.00066 13.1 0.3 13 36-48 12-24 (45)
277 2ytd_A Zinc finger protein 473 24.4 24 0.00081 12.8 0.5 13 36-48 12-24 (46)
278 2vut_I AREA, nitrogen regulato 24.3 45 0.0015 13.1 1.6 9 56-64 20-28 (43)
279 2ytk_A Zinc finger protein 347 24.3 24 0.00081 12.8 0.5 13 36-48 12-24 (46)
280 3uk3_C Zinc finger protein 217 24.3 35 0.0012 13.0 1.1 12 37-48 5-16 (57)
281 2eoz_A Zinc finger protein 473 24.3 20 0.00068 13.1 0.3 13 36-48 12-24 (46)
282 2ema_A Zinc finger protein 347 24.0 24 0.00083 12.8 0.5 13 36-48 12-24 (46)
283 2ysj_A Tripartite motif-contai 23.9 43 0.0015 13.5 1.4 12 10-21 21-32 (63)
284 2em9_A Zinc finger protein 224 23.8 25 0.00085 12.7 0.5 13 36-48 12-24 (46)
285 3l11_A E3 ubiquitin-protein li 23.8 53 0.0018 15.2 1.8 26 10-36 16-41 (115)
286 2yur_A Retinoblastoma-binding 23.5 54 0.0018 13.8 2.3 27 9-36 15-42 (74)
287 1pcx_A Protein transport prote 23.4 70 0.0024 20.8 2.7 32 9-45 112-143 (810)
288 1ptq_A Protein kinase C delta 23.3 46 0.0016 12.9 1.6 14 8-21 10-23 (50)
289 1yui_A GAGA-factor; complex (D 23.1 25 0.00086 13.5 0.5 13 36-48 24-36 (54)
290 4b6d_A RAC GTPase-activating p 23.1 46 0.0016 14.0 1.4 12 9-20 19-30 (61)
291 2epq_A POZ-, at HOOK-, and zin 23.1 27 0.00094 12.6 0.6 12 37-48 11-22 (45)
292 3o9x_A Uncharacterized HTH-typ 23.0 68 0.0023 15.1 2.2 40 9-48 2-48 (133)
293 1vfy_A Phosphatidylinositol-3- 22.8 59 0.002 14.0 2.0 11 10-20 12-22 (73)
294 2fnf_X Putative RAS effector N 22.8 56 0.0019 14.2 1.6 9 11-19 37-45 (72)
295 2en1_A Zinc finger protein 224 22.7 22 0.00076 12.9 0.3 12 37-48 13-24 (46)
296 1wfh_A Zinc finger (AN1-like) 22.6 58 0.002 14.1 1.6 13 8-20 14-26 (64)
297 2ct2_A Tripartite motif protei 22.5 60 0.002 13.9 2.4 40 8-47 14-67 (88)
298 2crw_A ARF GAP 3, ADP-ribosyla 22.0 64 0.0022 16.4 1.9 12 7-18 27-38 (149)
299 2epr_A POZ-, at HOOK-, and zin 22.0 29 0.00098 12.8 0.6 34 10-44 13-48 (48)
300 1bbo_A Human enhancer-binding 21.9 40 0.0014 12.8 1.0 12 37-48 2-13 (57)
301 2ysp_A Zinc finger protein 224 21.9 24 0.00084 12.8 0.3 13 36-48 12-24 (46)
302 2pzo_E CAP-Gly domain-containi 21.8 21 0.00073 14.1 0.1 10 55-64 17-26 (42)
303 2adr_A ADR1; transcription reg 21.7 41 0.0014 12.9 1.1 12 37-48 3-14 (60)
304 1wg2_A Zinc finger (AN1-like) 21.6 47 0.0016 14.4 1.2 13 8-20 14-26 (64)
305 2crr_A Stromal membrane-associ 21.5 61 0.0021 16.2 1.8 11 8-18 28-38 (141)
306 2dmi_A Teashirt homolog 3; zin 21.4 69 0.0024 14.3 2.3 10 11-20 21-30 (115)
307 2en6_A Zinc finger protein 268 21.4 24 0.00083 12.8 0.3 13 36-48 12-24 (46)
308 1wil_A KIAA1045 protein; ring 21.3 24 0.00081 16.4 0.2 31 9-39 15-46 (89)
309 2ep0_A Zinc finger protein 28 21.2 30 0.001 12.5 0.5 13 36-48 12-24 (46)
310 1sp2_A SP1F2; zinc finger, tra 21.1 36 0.0012 10.8 1.1 12 37-48 3-16 (31)
311 1rfh_A RAS association (ralgds 20.7 43 0.0015 13.8 1.0 10 10-19 23-32 (59)
312 2ab3_A ZNF29; zinc finger prot 20.6 27 0.00091 10.7 0.3 11 37-47 3-15 (29)
313 1faq_A RAF-1; transferase, ser 20.6 40 0.0014 13.2 0.9 12 9-20 14-25 (52)
314 2k4x_A 30S ribosomal protein S 20.6 62 0.0021 13.4 1.7 10 10-19 19-28 (55)
315 2iqj_A Stromal membrane-associ 20.5 51 0.0017 16.4 1.4 11 8-18 26-36 (134)
316 1ef4_A Subunit N, DNA-directed 20.5 40 0.0014 14.2 0.9 11 10-20 4-14 (55)
317 2zkr_u 60S ribosomal protein L 20.3 50 0.0017 17.1 1.3 25 9-33 3-30 (157)
318 3vk6_A E3 ubiquitin-protein li 20.2 40 0.0014 16.1 0.9 13 9-21 37-49 (101)
319 2kr4_A Ubiquitin conjugation f 20.2 58 0.002 14.4 1.4 26 10-36 15-40 (85)
320 1rmd_A RAG1; V(D)J recombinati 20.1 64 0.0022 14.9 1.7 38 10-48 24-70 (116)
321 1m2v_B SEC24, protein transpor 20.1 89 0.0031 20.8 2.7 32 9-45 228-259 (926)
No 1
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.82 E-value=1.4e-20 Score=86.90 Aligned_cols=62 Identities=23% Similarity=0.419 Sum_probs=54.9
Q ss_pred ccccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecch-hhhc
Q psy10221 4 TIITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK-QDYA 66 (67)
Q Consensus 4 ~~~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~-~~y~ 66 (67)
++....+.|.+|+++|.+.+.+.+.++.||++||+|..|+++|.+.. ++.+++.+||+ .||.
T Consensus 4 ~~~~~~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~cy~ 66 (76)
T 2cu8_A 4 GSSGMASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGG-HAEHDGKPFCHKPCYA 66 (76)
T ss_dssp SCCCCCCBCTTTCCBCCTTTEEEETTEEEETTTCBCSSSCCBCCTTS-CEEETTEEECTTTHHH
T ss_pred ccCCCCCCCcCCCCEeECCeEEEECCeEeeCCCCCCCCCCCccCCCc-eEeECCEEecchHHHH
Confidence 45667789999999999777889999999999999999999998754 57899999999 7985
No 2
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.82 E-value=9.4e-21 Score=88.67 Aligned_cols=62 Identities=26% Similarity=0.421 Sum_probs=53.5
Q ss_pred ccCCccccccCccccCceeeeecCceeccccccccccccccCCCCcee-eeCCeecchhhhcC
Q psy10221 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCF-IKDEAVYCKQDYAK 67 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~-~~~~~~~C~~~y~k 67 (67)
..+...|.+|+++|.+.+.+.++++.||++||+|..|+++|....++. ++++++||+.||.+
T Consensus 12 ~~~~~~C~~C~~~I~~~e~v~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~ 74 (82)
T 2co8_A 12 AGAGDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQ 74 (82)
T ss_dssp CCSSCBCSSSCCBCCTTTBCCBTTBCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCC
T ss_pred CCCCCCCcccCCCcccceEEEECCCeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHh
Confidence 445689999999999777888999999999999999999998876432 47999999999964
No 3
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.81 E-value=2.8e-20 Score=86.73 Aligned_cols=58 Identities=33% Similarity=0.744 Sum_probs=52.3
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.+.+.|..|+++|.+.+.+.++++.||++||+|..|+++|.+ . ++.+++++||+.||.
T Consensus 13 ~~~~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~C~~~L~~-~-~~~~~g~~yC~~~y~ 70 (80)
T 2dj7_A 13 RGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILTG-E-YISKDGVPYCESDYH 70 (80)
T ss_dssp SSCSCCTTTCCCCSSSCCEEETTEEECTTTCBCSSSCCBCSS-C-CEEETTEEECTTHHH
T ss_pred CCCCCCcCcCCeeCCCeEEEECCcccccccCCcCcCCCCcCC-C-eEEECCEEECHHHHH
Confidence 456789999999997778999999999999999999999985 3 688999999999985
No 4
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=99.81 E-value=1.4e-20 Score=87.86 Aligned_cols=61 Identities=31% Similarity=0.604 Sum_probs=51.4
Q ss_pred cccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 5 ~~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
+..+.+.|..|+++|.+.+.+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 3 ~~~~~~~C~~C~~~I~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~~~~yC~~cy~ 63 (81)
T 1a7i_A 3 NWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTT-VAIHDAEVYCKSCYG 63 (81)
T ss_dssp -----CBCSSSCCBCSSTTEEEETTEEEESSSEECSSSCCEECSSC-CEEETTEEECSHHHH
T ss_pred CCCCCCcCcCcCccccCceeEEeCCcccccccCccCCCCCCCCCCC-eEeeCCEEECHHHHH
Confidence 4667899999999998777889999999999999999999998765 578999999999985
No 5
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.81 E-value=2.4e-20 Score=85.62 Aligned_cols=58 Identities=17% Similarity=0.484 Sum_probs=51.5
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|.+|+++|.+. .+.++++.||++||+|..|+++|..+..++.+++++||+.||.
T Consensus 4 ~~~~C~~C~~~I~~~-~v~a~~~~wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~ 61 (73)
T 1wig_A 4 GSSGCDSCEKYITGR-VLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQ 61 (73)
T ss_dssp SCCSCSSSCCCCSSC-CBCCSSCCBCTTTSCCSSSCCCCCSSCCCEEETTEEECTTHHH
T ss_pred CcCCcccCCCEecCe-eEEeCCCCCCCCcCEeCCCCCCCCCCCeeEeeCCEEEChHHCh
Confidence 467999999999984 6889999999999999999999985455688999999999985
No 6
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.80 E-value=5.7e-20 Score=83.66 Aligned_cols=58 Identities=28% Similarity=0.617 Sum_probs=52.0
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.+...|..|+++|.+. .+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 3 ~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~~-f~~~~g~~yC~~c~~ 60 (70)
T 2d8x_A 3 SGSSGCHQCGEFIIGR-VIKAMNNSWHPECFRCDLCQEVLADIG-FVKNAGRHLCRPCHN 60 (70)
T ss_dssp CCSSBCSSSCCBCCSC-CEEETTEEECTTTSBCSSSCCBCSSSC-CEEETTEEECHHHHH
T ss_pred CCCCcCccCCCEecce-EEEECcccccccCCEeCCCCCcCCCCc-cEeECCeEECHHHhh
Confidence 4678999999999964 689999999999999999999999864 577999999999985
No 7
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.80 E-value=7.4e-20 Score=83.68 Aligned_cols=60 Identities=18% Similarity=0.542 Sum_probs=52.3
Q ss_pred cCCccccccCccccC---ceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 7 TELRYCVACGESITD---KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~---~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
...+.|.+|+++|.+ .+.+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.+
T Consensus 3 ~~~~~C~~C~~~I~~~~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~-f~~~~g~~yC~~c~~~ 65 (72)
T 1x4l_A 3 SGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRG-FLTERDDILCPDCGKD 65 (72)
T ss_dssp SCSCSBTTTTBCCCCSSSCSCEECSSCEECTTTCBCSSSCCBCTTSC-CEECSSSEECHHHHHT
T ss_pred CCCCCCcCCCccccCCCCcceEEECCcccCcccCEeccCCCcCCCCc-cEeECCEEEChhHcCc
Confidence 457899999999995 45788999999999999999999998654 5779999999999864
No 8
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.80 E-value=1.8e-19 Score=83.14 Aligned_cols=59 Identities=22% Similarity=0.629 Sum_probs=52.0
Q ss_pred CCccccccCccccC---ceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 8 ELRYCVACGESITD---KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 8 ~~~~C~~C~~~i~~---~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
-.+.|..|+++|.+ .+.+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.+
T Consensus 4 ~~~~C~~C~~~I~~~g~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~-f~~~~g~~yC~~cy~~ 65 (76)
T 1x68_A 4 GSSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKG-FLTQNKEIFCQKCGSG 65 (76)
T ss_dssp CCCCCTTTCCCCCTTTTCCEEEETTEEEEGGGCBCTTTCCBCSSSC-EEEETTEEEETTTTCC
T ss_pred cCCCCccCCCcccCCCCceeEEECCcccCcccCChhhCCCcCCCCc-eEeECCEEECHHHhhh
Confidence 45789999999995 45789999999999999999999998644 6789999999999964
No 9
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=99.80 E-value=4.8e-20 Score=90.72 Aligned_cols=59 Identities=32% Similarity=0.749 Sum_probs=52.9
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCC-CCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~-~~~~~~~~~~~~C~~~y~ 66 (67)
+.+.|.+|+++|.+.+.+.+.++.||++||+|+.|+++|.+ +..++.+++++||+.||.
T Consensus 2 ~~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~g~~~~~~~g~~yC~~~y~ 61 (114)
T 1j2o_A 2 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 61 (114)
T ss_dssp CCBCBSSSCSCBCSSEEEECSSSEECTTTCCCSSSCSCCCCSSSCCCCBTTBCCCHHHHH
T ss_pred cCCCCcCCCCeeCCcEEEEECchhHHHhcCcccccCCchhcCCCeeEEECCeeechHHHH
Confidence 46889999999998888999999999999999999999985 334688999999999985
No 10
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=99.79 E-value=5.4e-20 Score=91.64 Aligned_cols=59 Identities=36% Similarity=0.908 Sum_probs=52.2
Q ss_pred CccccccCccccCceeeeecCceeccccccccccccccCC-CCceeeeCCeecchhhhcC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~-~~~~~~~~~~~~C~~~y~k 67 (67)
.+.|.+|+++|.+.+++.+.++.||+.||+|..|+++|.+ +..++.++|.+||+.||.+
T Consensus 61 ~~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~ 120 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 120 (123)
T ss_dssp CSBBSSSSSBCCSSSEEEETTEEEETTTSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHH
T ss_pred CCcCcCCCCCcCCcEEEEeCCcEEcccccCcCcCCCcccccCCceEEECCEEeCHHHhhh
Confidence 5789999999998877899999999999999999999973 3446889999999999863
No 11
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=99.79 E-value=6e-20 Score=82.76 Aligned_cols=57 Identities=23% Similarity=0.602 Sum_probs=50.8
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|++|+++|.+ +.+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 4 ~~~~C~~C~~~I~~-~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~y~ 60 (66)
T 1nyp_A 4 GVPICGACRRPIEG-RVVNAMGKQWHVEHFVCAKCEKPFLGHR-HYERKGLAYCETHYN 60 (66)
T ss_dssp CCCEETTTTEECCS-CEECCTTSBEETTTCBCTTTCCBCSSSC-CEEETTEEECHHHHH
T ss_pred CCCCCcccCCEecc-eEEEECccccccCcCEECCCCCCCCCCc-eEeECCcEECHHHHH
Confidence 46789999999994 5788999999999999999999998754 578999999999985
No 12
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=1.6e-19 Score=82.53 Aligned_cols=59 Identities=22% Similarity=0.571 Sum_probs=51.6
Q ss_pred cCCccccccCccccCc-eeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDK-YLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|.+|+++|.+. ..+.+.++.||+.||+|..|+++|.+. .++.+++.+||+.||.
T Consensus 3 ~~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~-~~~~~~~~~yC~~cy~ 62 (72)
T 1x61_A 3 SGSSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQ-HFYAVERRAYCEGCYV 62 (72)
T ss_dssp SCCCCCSSSCSCCCSSSCCEECSSSEECTTTCBCSSSCCBCTTS-CEEESSSCEEEHHHHH
T ss_pred CCCCCCccCCCccCCCceEEEECCCeEcccCCcccccCCcCCcC-cCEeeCCeEECHHHHH
Confidence 4568999999999963 478899999999999999999999754 4688999999999985
No 13
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=1.9e-19 Score=81.69 Aligned_cols=58 Identities=28% Similarity=0.643 Sum_probs=51.4
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|..|+++|.+. .+.+.++.||++||+|..|+++|.+. .++.+++++||+.||.
T Consensus 3 ~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~-~~~~~~~~~yC~~cy~ 60 (69)
T 2cur_A 3 SGSSGCVKCNKAITSG-GITYQDQPWHADCFVCVTCSKKLAGQ-RFTAVEDQYYCVDCYK 60 (69)
T ss_dssp CCCCCCSSSCCCCCTT-CEEETTEEECTTTTBCTTTCCBCTTS-CEEECSSCEEEHHHHH
T ss_pred CCcCCCcccCCEeCcc-eEEECccccccCcCEECCCCCCCCCC-ccEeECCEEECHHHhH
Confidence 4578999999999875 68899999999999999999999864 4678999999999985
No 14
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=2e-19 Score=82.16 Aligned_cols=58 Identities=28% Similarity=0.619 Sum_probs=51.7
Q ss_pred CCccccccCccccCc-eeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDK-YLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|..|+++|.+. +.+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 4 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~~~~yC~~cy~ 62 (72)
T 1wyh_A 4 GSSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRS-FVPDKGAHYCVPCYE 62 (72)
T ss_dssp CCCBCSSSCCBCCSSSCEECSTTCCEETTTCBCTTTCCBTTTSC-EEEETTEEEEHHHHH
T ss_pred cCCCCccCCCccccCccEEEECccccCcccCeECCCCCcCCCCc-cCCcCCeEECHHHHH
Confidence 467999999999963 6788999999999999999999998764 678999999999985
No 15
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=2.8e-19 Score=81.65 Aligned_cols=58 Identities=26% Similarity=0.566 Sum_probs=51.6
Q ss_pred CCccccccCccccCc-eeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDK-YLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|..|+++|.+. ..+.+.++.||++||+|..|+++|.+. .++.+++.+||+.||.
T Consensus 4 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~-~~~~~~~~~yC~~cy~ 62 (72)
T 1x4k_A 4 GSSGCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTK-SFIPKDNQNFCVPCYE 62 (72)
T ss_dssp CCCCBSSSCCCCCSSSCEEEETTEEEETTTTCCSSSCCCCCSS-SEEEETTEEEEHHHHH
T ss_pred cCCCCccCCCcccCCceEEEECcCeecccCCcccccCCccCCC-ccCccCCeEECHHHHh
Confidence 357899999999975 478899999999999999999999876 4678999999999985
No 16
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=2.4e-19 Score=82.71 Aligned_cols=56 Identities=23% Similarity=0.513 Sum_probs=50.4
Q ss_pred ccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecch-hhhc
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCK-QDYA 66 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~-~~y~ 66 (67)
+.|.+|+++|.+.+.+.+.++.||++||+|..|+++|.+.. ++.+++.+||+ .||.
T Consensus 1 p~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~cy~ 57 (76)
T 1iml_A 1 PKCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGG-HAEHEGKPYCNHPCYS 57 (76)
T ss_dssp CBCTTTSSBCCGGGEEEETTEEEETTTCBCTTTCCBCCTTT-EEEETTEEEETTTHHH
T ss_pred CcCCCCCCEEECceEEEECCccccCCCCCccccCccCCCCc-eECcCCeEeeCHHHHH
Confidence 57999999999667889999999999999999999998864 67899999999 6985
No 17
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.78 E-value=1.5e-19 Score=85.95 Aligned_cols=58 Identities=22% Similarity=0.535 Sum_probs=52.6
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
....|..|+++|.+.+.+.+.++.||+.||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~y~ 71 (91)
T 2d8y_A 14 ARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGT-YASLHGRIYCKPHFN 71 (91)
T ss_dssp SSCBCTTTCCBCCTTSEEECSSSEEETTTCBCTTTCCBCCTTT-CCCSSSCCCCHHHHH
T ss_pred CCCcCccCCCccCCceeEEECCCEECCCCCeeCCCCCCCCCCC-cEeECCEEECHHHHH
Confidence 4679999999999877889999999999999999999998865 578999999999985
No 18
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=3.6e-19 Score=82.26 Aligned_cols=58 Identities=26% Similarity=0.625 Sum_probs=51.5
Q ss_pred CCccccccCccccC----ceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITD----KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~----~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.++.|++|+++|.+ .+.+.+.++.||+.||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 14 ~~~~C~~C~~~I~~~g~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-f~~~~~~~yC~~cy~ 75 (77)
T 2egq_A 14 VAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKR-FVFHQEQVYCPDCAK 75 (77)
T ss_dssp CCCCCSSSCCCCCCCSSCCCEEEETTEEEETTTCBCSSSCCBCTTSC-CCEETTEECCHHHHH
T ss_pred hCccCcccCCcccCCCCCceeEEECcceeCcccCEehhcCCCCCCCc-cEeECCEEEChHHhc
Confidence 45899999999994 56789999999999999999999998754 578999999999985
No 19
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=99.77 E-value=2.6e-19 Score=81.61 Aligned_cols=59 Identities=17% Similarity=0.484 Sum_probs=51.7
Q ss_pred cCCccccccCccccCce-eeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKY-LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.....|.+|+++|...+ ++.+.++.||++||+|..|+++|.+.. ++.++|++||+.||.
T Consensus 9 ~~~~~C~~C~~~i~~~e~~~~~~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~y~ 68 (72)
T 3f6q_B 9 SASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGL-FYEFEGRKYCEHDFQ 68 (72)
T ss_dssp CTTCBCTTTCCBCCTTCEEEEETTEEEETTTSSCTTTCCCCGGGC-CEEETTEEECHHHHH
T ss_pred cCCccchhcCccccCCceEEEeCcCeeCcCCCcccCCCCCCCCCC-eEeECCeEeCHHHHH
Confidence 45679999999999655 467999999999999999999998764 578999999999985
No 20
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.77 E-value=3.4e-19 Score=81.06 Aligned_cols=58 Identities=24% Similarity=0.621 Sum_probs=51.0
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|..|+++|.+. .+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 3 ~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~~~~yC~~cy~ 60 (70)
T 2d8z_A 3 SGSSGCVQCKKPITTG-GVTYREQPWHKECFVCTACRKQLSGQR-FTARDDFAYCLNCFC 60 (70)
T ss_dssp CCCCBCSSSCCBCCSS-EEESSSSEEETTTSBCSSSCCBCTTSC-CEESSSSEECHHHHH
T ss_pred CCCCCCcccCCeeccc-eEEECccccCCCCCccCCCCCcCCcCc-eEeeCCeEECHHHHH
Confidence 3567899999999975 588999999999999999999998654 578999999999985
No 21
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.77 E-value=4e-19 Score=84.29 Aligned_cols=58 Identities=24% Similarity=0.539 Sum_probs=51.1
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|..|+++|.+ +.+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 23 ~~~~~C~~C~~~I~~-~~v~a~~~~~H~~CF~C~~C~~~L~~~~-f~~~~g~~yC~~cy~ 80 (90)
T 2dar_A 23 KRTPMCAHCNQVIRG-PFLVALGKSWHPEEFNCAHCKNTMAYIG-FVEEKGALYCELCYE 80 (90)
T ss_dssp TCCCBBSSSCCBCCS-CEEEETTEEECTTTCBCSSSCCBCSSSC-BEESSSCEECHHHHH
T ss_pred CCCCCCccCCCEecc-eEEEECCccccccCCccCCCCCCCCCCE-eEeECCEEECHHHHH
Confidence 356789999999975 4688999999999999999999998754 578999999999985
No 22
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=99.77 E-value=3.8e-19 Score=84.21 Aligned_cols=58 Identities=26% Similarity=0.670 Sum_probs=51.3
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.....|..|++.|.+. .+.+.++.||++||+|..|+++|.+.. ++.+++.+||+.||.
T Consensus 23 ~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~y~ 80 (89)
T 1x64_A 23 QRMPLCDKCGSGIVGA-VVKARDKYRHPECFVCADCNLNLKQKG-YFFVEGELYCETHAR 80 (89)
T ss_dssp CSCCBCTTTCCBCCSC-CEESSSCEECTTTCCCSSSCCCTTTSC-CEEETTEEECHHHHH
T ss_pred CcCCCcccCCCEeccc-EEEECCceECccCCEecCCCCCCCCCC-eEeECCEEECHHHHH
Confidence 3457899999999984 688999999999999999999998765 578899999999985
No 23
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=99.77 E-value=6.2e-19 Score=79.29 Aligned_cols=58 Identities=21% Similarity=0.501 Sum_probs=50.7
Q ss_pred CccccccCccccC-ceeeeecCceec--cccccccccccccCCCCceeeeCCeecc-hhhhcC
Q psy10221 9 LRYCVACGESITD-KYLLQVSDKSWH--AQCLRCCICQLVLDRHPSCFIKDEAVYC-KQDYAK 67 (67)
Q Consensus 9 ~~~C~~C~~~i~~-~~~~~~~~~~~h--~~cf~C~~C~~~l~~~~~~~~~~~~~~C-~~~y~k 67 (67)
++.|.+|+++|.+ .+.+.+.++.|| ++||+|+.|+++|.+.. ++.++|++|| .+||.|
T Consensus 2 a~~C~~C~~~I~~~~~~v~a~~~~wH~~~~CF~C~~C~~~L~~~~-f~~~~g~~yC~~~C~~k 63 (65)
T 2iyb_E 2 AVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQK-FMPVEGMVFCSVECKKR 63 (65)
T ss_dssp CEECTTTSSEECTTSCEEEETTEEEETTTTTSBCTTTCCBCTTSC-CEEETTEEESSHHHHHT
T ss_pred cCCCcCCCCeeccCceEEEECCCccCCCCCCEECCCCCCcCCCCc-eEEECCEEecCHHHhhh
Confidence 4689999999995 367899999999 99999999999998754 5789999999 888854
No 24
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.77 E-value=4.1e-19 Score=82.57 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=51.5
Q ss_pred ccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
....++|..|+++|.+ +.+.+.++.||++||+|..|+++|.+. . +.+++.+||+.||.+
T Consensus 12 ~~~~~~C~~C~~~I~~-~~v~a~~~~~H~~CF~C~~C~~~L~~~-~-f~~~g~~yC~~cy~~ 70 (79)
T 2cor_A 12 GLGKYICQKCHAIIDE-QPLIFKNDPYHPDHFNCANCGKELTAD-A-RELKGELYCLPCHDK 70 (79)
T ss_dssp CCCCCBCTTTCCBCCS-CCCCCSSSCCCTTTSBCSSSCCBCCTT-C-EEETTEEECHHHHHT
T ss_pred ccCCCCCccCCCEecc-eEEEECcceeCCCCCEeCCCCCccCCC-C-EeECCEEeCHHHHHH
Confidence 3456899999999995 468899999999999999999999875 3 589999999999864
No 25
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.77 E-value=2.9e-19 Score=82.54 Aligned_cols=61 Identities=16% Similarity=0.445 Sum_probs=52.6
Q ss_pred cccCCccccccCccccC-ceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 5 IITELRYCVACGESITD-KYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 5 ~~~~~~~C~~C~~~i~~-~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.......|.+|+++|.+ ..++.+.++.||+.||+|..|+++|.+.. ++.++|.+||+.||.
T Consensus 7 ~~~~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~~y~ 68 (77)
T 1g47_A 7 NALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGL-FYEFEGRKYCEHDFQ 68 (77)
T ss_dssp SCCCCCBCSSSCCBCCSTTTCEEETTEEECTTTCCCTTTCCCCGGGC-SEEETTEEECHHHHH
T ss_pred cCCCCCCchhcCCccCCCceEEEeCccEeccccCeECCCCCCCCCCC-eEeECCeEeCHHHHH
Confidence 34556899999999984 44578999999999999999999998765 578999999999985
No 26
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=99.76 E-value=7.8e-19 Score=87.93 Aligned_cols=58 Identities=33% Similarity=0.761 Sum_probs=52.2
Q ss_pred CccccccCccccCceeeeecCceeccccccccccccccCC-CCceeeeCCeecchhhhc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~-~~~~~~~~~~~~C~~~y~ 66 (67)
.+.|.+|+++|.+.+++.++++.||++||+|..|+++|.. +..++.++|.+||+.||.
T Consensus 2 ~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 60 (131)
T 2xjy_A 2 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 60 (131)
T ss_dssp CCBBTTTCCBCCSSEEEEETTEEEETTTCBCTTTCCBCSSTTCCEEEETTEEECHHHHH
T ss_pred cccCcCCCCEeCCcEEEEECCCcccHHHcccCcCCCccccCCCeEEEECCEEeecCchh
Confidence 5789999999999877899999999999999999999974 345788999999999985
No 27
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=99.76 E-value=1.9e-19 Score=89.48 Aligned_cols=60 Identities=35% Similarity=0.872 Sum_probs=53.0
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCC-CCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~-~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|.+|+++|.+.+++.+.++.||++||+|..|+++|.+ +..++.+++.+||+.||.
T Consensus 3 ~~~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~ 63 (122)
T 1m3v_A 3 LSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYI 63 (122)
T ss_dssp SCCCCBSSSSSCCCSSCCEEETTEEECHHHHCCSSSCCCTTTSEECCEEETTEEECHHHHH
T ss_pred CCCCCCcccCCEeCCcEEEEECCceeHhhCCCcCCCCCcccccCCeEEEECCeeecHHHHH
Confidence 456899999999998877899999999999999999999973 234688999999999985
No 28
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=81.49 Aligned_cols=59 Identities=31% Similarity=0.667 Sum_probs=51.5
Q ss_pred CCccccccCcccc-CceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 8 ELRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 8 ~~~~C~~C~~~i~-~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
-.+.|.+|+++|. +..++.+.++.||+.||+|+.|+++|.+.. ++.+++++||+.||.+
T Consensus 14 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-f~~~~~~~~C~~c~~~ 73 (82)
T 2ehe_A 14 FANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEP-FTCQDSELLCNDCYCS 73 (82)
T ss_dssp CSCBCTTTCCBCCSSCCBCCCSSCCCBTTTSBCTTTCCBCSSCC-EEEETTEEEETTTSSC
T ss_pred cCCcCccCCCccccCcEEEEeCCccccccCCeecCCCCccCCCc-cEeeCCEEECHHHHhh
Confidence 3578999999999 455788899999999999999999998654 6789999999999864
No 29
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=99.75 E-value=2.5e-18 Score=82.86 Aligned_cols=60 Identities=25% Similarity=0.606 Sum_probs=52.8
Q ss_pred cCCccccccCcccc-CceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 7 TELRYCVACGESIT-DKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 7 ~~~~~C~~C~~~i~-~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
...+.|.+|+++|. +.+.+.+.++.||+.||+|..|+++|.+.. ++.+++++||+.||.+
T Consensus 3 ~~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~cy~~ 63 (101)
T 2cup_A 3 SGSSGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANET-FVAKDNKILCNKCTTR 63 (101)
T ss_dssp SCCCBCSSSCCBCCSSSCEEEETTEEEETTTCCCSSSCCCTTSSC-CEEETTEEECHHHHTT
T ss_pred CCCCcCcccCCcccCCceEEEECccChhhcCCcccccCCCCCcCe-eECcCCEEEChhHhhh
Confidence 45689999999998 467899999999999999999999997644 5789999999999864
No 30
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.75 E-value=1.7e-19 Score=83.77 Aligned_cols=58 Identities=24% Similarity=0.662 Sum_probs=51.5
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
+..+.|..|+++|.+. .+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 13 ~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~cy~ 70 (79)
T 1x62_A 13 QKLPMCDKCGTGIVGV-FVKLRDRHRHPECYVCTDCGTNLKQKG-HFFVEDQIYCEKHAR 70 (79)
T ss_dssp CCCCCCSSSCCCCCSS-CEECSSCEECTTTTSCSSSCCCHHHHC-CEESSSCEECHHHHH
T ss_pred CCCCccccCCCCccCc-EEEECcceeCcCcCeeCCCCCCCCCCC-eEeECCEEECHHHHH
Confidence 4568999999999985 789999999999999999999997644 578999999999985
No 31
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.75 E-value=1.6e-18 Score=80.91 Aligned_cols=58 Identities=24% Similarity=0.557 Sum_probs=50.9
Q ss_pred CCccccccCccccCce-eeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKY-LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|.+|+++|.+.+ .+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 14 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~~~~yC~~cy~ 72 (82)
T 1x63_A 14 DSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGS-FFPKGEDFYCVTCHE 72 (82)
T ss_dssp CSCBCSSSCCBCCSSSCEEECSSCEEETTTCCCSSSCCCCTTSC-EEEETTEEEEHHHHH
T ss_pred cCCcCccCCcccccCceEEEECccccccccCchhhCCCccCCCc-cEeeCCEEECHHHHH
Confidence 3579999999999543 588999999999999999999998764 678999999999985
No 32
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.75 E-value=9.3e-19 Score=81.57 Aligned_cols=59 Identities=27% Similarity=0.750 Sum_probs=50.7
Q ss_pred ccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeee-CCeecchhhhc
Q psy10221 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIK-DEAVYCKQDYA 66 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~-~~~~~C~~~y~ 66 (67)
....+.|.+|+++|.+. .+.+.++.||++||+|..|+++|.+.. ++.. ++++||+.||.
T Consensus 12 ~~~~~~C~~C~~~I~~~-~~~a~~~~~H~~CF~C~~C~~~L~~~~-f~~~~~g~~yC~~cy~ 71 (81)
T 2dlo_A 12 VATLEKCATCSQPILDR-ILRAMGKAYHPGCFTCVVCHRGLDGIP-FTVDATSQIHCIEDFH 71 (81)
T ss_dssp CSSCCBCTTTCCBCCSC-CEEETTEEECTTTCBCSSSCCBCTTSC-EECCTTCCCEEHHHHH
T ss_pred hcCCCccccCCCeecce-eEEECCccccHHhcCcccCCCccCCCe-eEECCCCEEECHHHHH
Confidence 35678999999999975 789999999999999999999998654 4444 78999999985
No 33
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.75 E-value=8.2e-19 Score=81.74 Aligned_cols=58 Identities=16% Similarity=0.541 Sum_probs=50.2
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCcee-eeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCF-IKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~-~~~~~~~C~~~y~ 66 (67)
-.++|.+|+++|.+ +.+.+.++.||++||+|..|+++|..+..+. .+++++||+.||.
T Consensus 14 ~~~~C~~C~~~I~~-~~~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~~~~~C~~c~~ 72 (81)
T 1x6a_A 14 FGEFCHGCSLLMTG-PFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHN 72 (81)
T ss_dssp SSCBCTTTCCBCCS-CCBCCTTCCBCTTSCBCTTTCCBCCTTSCEEECSSSCEEEHHHHH
T ss_pred cCCcCccCCCCcCc-eEEEECCceeccccCCccCCCCccCCCCcEEEeeCCEEECHHHHH
Confidence 45789999999995 4788999999999999999999997655555 4899999999985
No 34
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=99.75 E-value=1.5e-18 Score=86.50 Aligned_cols=57 Identities=23% Similarity=0.521 Sum_probs=51.9
Q ss_pred CccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.+.|.+|+++|.+++.+.+.++.||++||+|..|+++|.+. .++.++|++||+.||.
T Consensus 3 ~~~C~~C~~~I~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~-~f~~~~g~~yC~~cy~ 59 (126)
T 2xqn_T 3 KPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGE-IYVMVNDKPVCKPCYV 59 (126)
T ss_dssp CCBBTTTSSBCCSSCEEEETTEEECGGGSBCTTTCCBCTTS-EEEEETTEEEEHHHHH
T ss_pred CCCCccCCCEeCCceEEeeCCCCccCCCCCcCCCCCCCCcC-EEEeECCEEechHHhC
Confidence 57899999999987788999999999999999999999864 4678999999999985
No 35
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.74 E-value=1.7e-18 Score=80.43 Aligned_cols=57 Identities=23% Similarity=0.575 Sum_probs=51.0
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.|.+|+++|.+. .+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 14 ~~~~C~~C~~~I~~~-~v~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~~~~yC~~~y~ 70 (80)
T 1x3h_A 14 FSPKCGGCNRPVLEN-YLSAMDTVWHPECFVCGDCFTSFSTGS-FFELDGRPFCELHYH 70 (80)
T ss_dssp CSCBCTTTCCBCCSS-CEEETTEEECTTTCBCSSSCCBSCSSC-CEESSSCEECHHHHH
T ss_pred cCCccccCCCeecce-eEEECCCeEecCcCChhhCCCCCCCCc-EEeECCEEECHHHHH
Confidence 357999999999984 689999999999999999999998765 578999999999985
No 36
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=99.74 E-value=3.8e-18 Score=89.47 Aligned_cols=60 Identities=35% Similarity=0.912 Sum_probs=53.6
Q ss_pred cccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 5 ~~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.+.|..|+++|.+.+++.+.++.||+.||+|..|+++|.+.. +.++|.+||+.||.
T Consensus 56 ~~~~~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~--f~~~g~~yC~~~y~ 115 (182)
T 2jtn_A 56 GTPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERC--FSRGESVYCKDDFF 115 (182)
T ss_dssp CCCSCCBCBTSSSBCCCSEEEEETTEEECSSTTSCTTTCCCCSSCC--EEETTEEECHHHHH
T ss_pred CCCCCCcCccCCCCccCceeEEecCCeEccccCccCCCCCccCCCc--eeECCEeeecCccc
Confidence 3556789999999999887788999999999999999999998754 57999999999985
No 37
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.74 E-value=2.6e-18 Score=79.82 Aligned_cols=58 Identities=28% Similarity=0.610 Sum_probs=51.3
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|.+|+++|.+. .+.+.++.||++||+|..|+++|.+. .++.+++.+||+.||.
T Consensus 13 ~~~~~C~~C~~~I~~~-~v~a~~~~~H~~CF~C~~C~~~L~~~-~~~~~~~~~yC~~cy~ 70 (80)
T 2cuq_A 13 KFAPRCARCSKTLTQG-GVTYRDQPWHRECLVCTGCQTPLAGQ-QFTSRDEDPYCVACFG 70 (80)
T ss_dssp CSSCCCTTTCCCCCSC-CEESSSSEECTTTCBCSSSCCBCTTC-CEEECSSSEEEHHHHH
T ss_pred ccCCcCCCCCCEecCc-EEEECCchhhhhhCCcccCCCcCCCC-eeEeECCEEECHHHHH
Confidence 3468999999999975 68899999999999999999999765 4678999999999985
No 38
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=99.72 E-value=2.3e-18 Score=90.71 Aligned_cols=60 Identities=35% Similarity=0.872 Sum_probs=53.1
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCC-CCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR-HPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~-~~~~~~~~~~~~C~~~y~ 66 (67)
...+.|..|+++|.+.+++.++++.||++||+|..|+++|.. +..++.++|.+||+.||.
T Consensus 3 l~~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~g~~~~~~~g~~yC~~cy~ 63 (188)
T 1rut_X 3 LSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYI 63 (188)
T ss_dssp -CCCBBTTTCCBCCCSEEEEETTEEECGGGCBCTTTCCBHHHHCSEEEEETTEEECHHHHH
T ss_pred CCCCcCccCCCEeCCceeEEecCcEecccCcccCCCCcccccCCceEEEeCCccccccccc
Confidence 346899999999998878899999999999999999999975 445788999999999985
No 39
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=99.72 E-value=1.4e-17 Score=77.55 Aligned_cols=59 Identities=17% Similarity=0.461 Sum_probs=49.9
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
-.+.|..|+++|.+ +.+.+.++.||++||+|..|+++|..+..+...++.+||..||.+
T Consensus 14 ~~~~C~~C~~~I~~-~~v~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~~~~C~~C~~~ 72 (81)
T 1v6g_A 14 YGTRCFSCDQFIEG-EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP 72 (81)
T ss_dssp CCCBCTTTCCBCCS-CCEEETTEEECTTTSSCSSSCCCCCSSSCEEEETTEEEEHHHHSC
T ss_pred hCCcCccccCEecc-ceEEECCceeCccCCccccCCCCCCCCCEEEeCCCCEEChhhhcc
Confidence 45799999999996 478999999999999999999999876654445666899999864
No 40
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=99.72 E-value=4.2e-18 Score=84.69 Aligned_cols=58 Identities=24% Similarity=0.602 Sum_probs=50.2
Q ss_pred CccccccCccccCc-eeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 9 LRYCVACGESITDK-YLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 9 ~~~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
...|..|++.|... .++.+.++.||+.||+|..|+++|..+..++.+++.+||+.||.
T Consensus 8 ~~~C~~C~~~I~~~e~~~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~g~~yC~~cy~ 66 (123)
T 2l3k_A 8 DGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFSVGDRYLLINSDIVCEQDIY 66 (123)
T ss_dssp SCCCSSSSCCCCTTCCCCCCSSCCCCTTTCBCTTTCCBCCTTCEEEECSSSEEEGGGHH
T ss_pred CCcccCCCCeecCCceEEEECCcccccccCccccCCCCCCCCCcEEeeCCEEEcHHHhH
Confidence 35899999999963 45789999999999999999999965555788999999999985
No 41
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=99.71 E-value=7.2e-18 Score=87.59 Aligned_cols=58 Identities=36% Similarity=0.973 Sum_probs=50.5
Q ss_pred cCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.+.+.|.+|+++|.+.+++.++++.||++||+|..|+++|.+.. +.++|.+||+.||.
T Consensus 4 ~~~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~--f~~~g~~yC~~~y~ 61 (169)
T 2rgt_A 4 PEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERC--FSRGESVYCKDDFF 61 (169)
T ss_dssp ---CBBSSSSSBCCSSSCEECSSCEECTTTSBCTTTCCBCCSCC--EESSSCEECHHHHH
T ss_pred CCCCccccCCCccCCcEEEEECCcEEccccCccCCCCCcCCCCC--cccCCeeeeccccc
Confidence 45789999999999887788999999999999999999998754 57999999999985
No 42
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=99.69 E-value=1.5e-17 Score=87.79 Aligned_cols=60 Identities=23% Similarity=0.545 Sum_probs=53.7
Q ss_pred ccCCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 6 ITELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
..+.+.|..|+++|.+.+.+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 4 ~~~~~~C~~C~~~I~~~~~v~a~g~~wH~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~cy~ 63 (192)
T 1b8t_A 4 WGGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTT-VAVHGDEIYCKSCYG 63 (192)
T ss_dssp CCCCEECTTTCCEECSSCCEEETTEEECTTTCBCTTTCCBCCSSS-EEEETTEEEEHHHHH
T ss_pred CCCCCcCccCCCeecceeEEEeCCceecCCCCcCcccCCcCCCCe-eEecCCEeeChhhhH
Confidence 455789999999999777888999999999999999999998864 688999999999985
No 43
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=99.67 E-value=4.4e-17 Score=86.03 Aligned_cols=58 Identities=33% Similarity=0.659 Sum_probs=51.8
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
+.+.|.+|+++|.+.+.+.+.++.||++||+|..|+++|.+.. ++.+++++||+.||.
T Consensus 114 ~~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~-~~~~~g~~yC~~cy~ 171 (192)
T 1b8t_A 114 GSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTT-LADKDGEIYCKGCYA 171 (192)
T ss_dssp CCEECTTTSCEECSSSCEEETTEEECTTTCBCTTTCCBCCSSS-EEEETTEEEEHHHHH
T ss_pred CCCcCCCCCCEecCcEEEecCCCccchhcCCccccCCCCCCCc-ccccCCEEeCHHHHH
Confidence 3567999999999777888999999999999999999998754 678999999999985
No 44
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=99.64 E-value=2.8e-16 Score=78.60 Aligned_cols=56 Identities=25% Similarity=0.631 Sum_probs=49.5
Q ss_pred cccccCccccCc-eeeeecCceeccccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 11 YCVACGESITDK-YLLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 11 ~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.|..|+++|.+. ..+.+.++.||++||+|..|+++|..+..++..++++||+.||.
T Consensus 68 ~C~~C~~~I~~~e~~~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~~~~C~~c~~ 124 (131)
T 2xjy_A 68 LCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 124 (131)
T ss_dssp ECTTTCCEECTTSEEEEETTEEEEGGGCBCTTTCCBCCTTCEEEEETTEEEEGGGHH
T ss_pred ChhhcCCccCccceeEeeCCceECccCcccCCCCCCCCCCCEEEEECCEEEcHHHHH
Confidence 899999999964 46789999999999999999999965555778999999999985
No 45
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=99.60 E-value=1.1e-15 Score=80.52 Aligned_cols=57 Identities=23% Similarity=0.607 Sum_probs=49.8
Q ss_pred cccccCccccCce-eeeecCceeccccccccccccccCCCCceeeeCCeecchhhhcC
Q psy10221 11 YCVACGESITDKY-LLQVSDKSWHAQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYAK 67 (67)
Q Consensus 11 ~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~k 67 (67)
.|..|+++|...+ ++.+.++.||+.||+|..|+++|..+..++..++++||+.||.+
T Consensus 71 ~C~~C~~~I~~~e~~i~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~g~~yC~~c~~~ 128 (188)
T 1rut_X 71 ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPT 128 (188)
T ss_dssp ECTTTCCEECTTSEEEEETTEEECGGGCBCTTTCCBCCTTCEEEEETTEEEEGGGCCT
T ss_pred ccccCCCccccCcEEEEcCCCEEeCCCCeECCCCCCCCCCCeEEEECCeEECHHHHHH
Confidence 7999999999643 57899999999999999999999765556789999999999863
No 46
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=99.58 E-value=1.9e-15 Score=75.16 Aligned_cols=58 Identities=21% Similarity=0.519 Sum_probs=49.7
Q ss_pred CCccccccCccccC-ceeeeecCceec--cccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITD-KYLLQVSDKSWH--AQCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~-~~~~~~~~~~~h--~~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
-.+.|.+|+++|.+ ...+.+.++.|| ++||+|..|+++|.+ ..++.+++++||+.+|.
T Consensus 62 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~~~CF~C~~C~~~l~~-~~f~~~~~~~yC~~~~~ 122 (126)
T 2xqn_T 62 HAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIG-QKFMPVEGMVFCSVECK 122 (126)
T ss_dssp SCCBCTTTCSBCCTTSCEEEETTEEEESSTTTSBCTTTCCBCTT-SEEEEETTEEESSHHHH
T ss_pred cCccCcccCCcCCcCceEEECCCCEeeCCCCCcCcCCCCCccCC-CeeEeECCEEcchHHhh
Confidence 35789999999995 346889999999 999999999999985 44678999999997764
No 47
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=99.54 E-value=5.8e-15 Score=76.63 Aligned_cols=58 Identities=26% Similarity=0.618 Sum_probs=48.9
Q ss_pred CccccccCccccCce-eeeecCceeccccccccccccccCCCCcee-eeCCeecchhhhc
Q psy10221 9 LRYCVACGESITDKY-LLQVSDKSWHAQCLRCCICQLVLDRHPSCF-IKDEAVYCKQDYA 66 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~-~~~~~~~C~~~y~ 66 (67)
.+.|.+|+++|.+.+ ++.+.++.||+.||+|..|+++|..+..++ ..++++||+.||.
T Consensus 65 ~~~C~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~~C~~c~~ 124 (169)
T 2rgt_A 65 GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYE 124 (169)
T ss_dssp SCBCTTTCCBCCTTSEEEEETTEEEEGGGCBCTTTCCBCCTTCEEEECTTSCEEEHHHHH
T ss_pred cccccccccccCCCcEEEEcCCceEeeCCCcCCCCCCCCCCCCceEEccCCeEECHHHHH
Confidence 578999999999754 457999999999999999999998655444 4689999999985
No 48
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=99.52 E-value=6.7e-15 Score=77.13 Aligned_cols=59 Identities=25% Similarity=0.586 Sum_probs=49.4
Q ss_pred CCccccccCccccCce-eeeecCceeccccccccccccccCCCCcee-eeCCeecchhhhc
Q psy10221 8 ELRYCVACGESITDKY-LLQVSDKSWHAQCLRCCICQLVLDRHPSCF-IKDEAVYCKQDYA 66 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C~~C~~~l~~~~~~~-~~~~~~~C~~~y~ 66 (67)
-.+.|..|+++|.+.+ ++.+.++.||+.||+|..|+++|..+..++ ..++++||+.||.
T Consensus 118 f~~kC~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~yC~~cy~ 178 (182)
T 2jtn_A 118 FGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYE 178 (182)
T ss_dssp TSCCCTTTCCCCCSSCCCCEETTEECCTTTCCCTTTCCCCCTTCEEEECTTSCEECHHHHH
T ss_pred cccccccCCCccCCCceEEecCCCCEEeCCCcCCCCCCCCCCCCceEEccCCEEECHHHHH
Confidence 3578999999998654 457899999999999999999998655444 4689999999985
No 49
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=98.87 E-value=1.8e-09 Score=51.64 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=31.0
Q ss_pred CCccccccCccccCc-eeeeecCceeccccccccccc
Q psy10221 8 ELRYCVACGESITDK-YLLQVSDKSWHAQCLRCCICQ 43 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~-~~~~~~~~~~h~~cf~C~~C~ 43 (67)
-.+.|.+|+++|.+. ..+.+.++.||++||+|..|+
T Consensus 65 ~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~ 101 (101)
T 2cup_A 65 DSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFSGPSSG 101 (101)
T ss_dssp CCCBCSSSCCBCCSSSCEEESSSCEEETTTCCCTTCC
T ss_pred cCCccccCCCccccCCeEEEeCCcchHHhCCCCCCCC
Confidence 357899999999943 468899999999999999985
No 50
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=98.85 E-value=8.8e-10 Score=42.59 Aligned_cols=29 Identities=28% Similarity=0.662 Sum_probs=26.7
Q ss_pred CccccccCccccCceeeeecCceeccccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL 37 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf 37 (67)
.+.|..|++.|+.++.+.+.++.||..||
T Consensus 3 ~~~C~~C~k~Vy~~Ek~~~~g~~~Hk~CF 31 (31)
T 1zfo_A 3 NPNCARCGKIVYPTEKVNCLDKFWHKACF 31 (31)
T ss_dssp CCBCSSSCSBCCGGGCCCSSSSCCCGGGC
T ss_pred CCcCCccCCEEecceeEEECCeEecccCC
Confidence 46899999999988899999999999997
No 51
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=97.58 E-value=3.4e-05 Score=37.90 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=13.6
Q ss_pred CceeeeCCeecchhhhc
Q psy10221 50 PSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 50 ~~~~~~~~~~~C~~~y~ 66 (67)
..++.+++++||..||.
T Consensus 95 ~~f~~~~~~~yC~~~~~ 111 (122)
T 1m3v_A 95 GEFGDEDERLITRLENT 111 (122)
T ss_dssp CTTCCTTCCCCEECTTT
T ss_pred CccEecCCEeEccCcch
Confidence 44567899999999875
No 52
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=96.06 E-value=0.0028 Score=30.64 Aligned_cols=57 Identities=11% Similarity=0.036 Sum_probs=35.0
Q ss_pred ccccccCccccC--ceeeeecCcee---------cccccccc-----ccccccCCCCceeeeCCeecchhhhc
Q psy10221 10 RYCVACGESITD--KYLLQVSDKSW---------HAQCLRCC-----ICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 10 ~~C~~C~~~i~~--~~~~~~~~~~~---------h~~cf~C~-----~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
-.|..|++++.+ .......++.| .+.|..|. .|+..+..+..++.+++++||..||.
T Consensus 31 F~C~~C~~~L~~~g~~~~~~~g~~yC~~~y~~~f~~~c~~c~~~~~~~~~~~~~~g~~f~~~~~~~~C~~~~~ 103 (114)
T 1j2o_A 31 LSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLGGSGGHMGSGGDVMVVGEPTLMGGEFGDEDERLITRLENT 103 (114)
T ss_dssp CCCSSSCSCCCCSSSCCCCBTTBCCCHHHHHHHHTSCCSSCBSCSCCCSSCSSTTSSBCCCSSSCCCEEEECT
T ss_pred CcccccCCchhcCCCeeEEECCeeechHHHHHHhCcccCcCCCCceeEcCCccCCCCeeEEcCCEeecchhhh
Confidence 368889988864 22334444443 33443332 24555444555678999999999875
No 53
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=89.28 E-value=0.12 Score=23.76 Aligned_cols=33 Identities=24% Similarity=0.527 Sum_probs=27.0
Q ss_pred CccccccCccccCceeeeecCceeccccccccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCI 41 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~ 41 (67)
...|.-|.+.+++...+.--...-|..||.|+.
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr 47 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSR 47 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCeeeccccH
Confidence 357899999999887777777778999999864
No 54
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.20 E-value=0.24 Score=22.26 Aligned_cols=36 Identities=14% Similarity=0.312 Sum_probs=26.2
Q ss_pred cccccCCccccccCccccCceeeeecCceecccccc
Q psy10221 3 KTIITELRYCVACGESITDKYLLQVSDKSWHAQCLR 38 (67)
Q Consensus 3 ~~~~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~ 38 (67)
+.|......|+.|...|.....-..=+..||..|+.
T Consensus 9 ~~y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 9 ETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp CCCSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHH
T ss_pred hhccCCCCcCcchhhHcccCCccCCCCchhhHHHHH
Confidence 456677889999999998654433445678988874
No 55
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=88.64 E-value=0.4 Score=20.43 Aligned_cols=26 Identities=19% Similarity=0.423 Sum_probs=16.6
Q ss_pred cccccccccCCCCceeeeCCeecc-hhh
Q psy10221 38 RCCICQLVLDRHPSCFIKDEAVYC-KQD 64 (67)
Q Consensus 38 ~C~~C~~~l~~~~~~~~~~~~~~C-~~~ 64 (67)
.|..|+...+..+ .+.++|+.|| +.|
T Consensus 9 aC~~C~c~Vs~~e-ai~~dGK~YCSe~C 35 (55)
T 1jjd_A 9 ACEPCLCNVDPSK-AIDRNGLYYCSEAC 35 (55)
T ss_dssp SSTTCCCCBCTTT-SEESSSCEESSHHH
T ss_pred cCCCCeeEechHH-hhhcCCeEEehHHH
Confidence 4566777666533 4678888887 444
No 56
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=87.91 E-value=0.37 Score=26.29 Aligned_cols=44 Identities=16% Similarity=0.362 Sum_probs=30.0
Q ss_pred cccCCccccccCccccCceeeeecCceeccccc----------cccccccccCC
Q psy10221 5 IITELRYCVACGESITDKYLLQVSDKSWHAQCL----------RCCICQLVLDR 48 (67)
Q Consensus 5 ~~~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf----------~C~~C~~~l~~ 48 (67)
+......|..|...|..+..-..=+..||..|+ .|-.|+..+..
T Consensus 176 ~~~~i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 176 YPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp CTTTCCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred cCCCCCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 444578999999999865332223677999987 56666666543
No 57
>2das_A Zinc finger MYM-type protein 5; trash domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.17
Probab=85.90 E-value=0.69 Score=20.03 Aligned_cols=27 Identities=15% Similarity=0.610 Sum_probs=18.6
Q ss_pred cccccccccccCCCCceeeeCC--eecch
Q psy10221 36 CLRCCICQLVLDRHPSCFIKDE--AVYCK 62 (67)
Q Consensus 36 cf~C~~C~~~l~~~~~~~~~~~--~~~C~ 62 (67)
-..|+.|+++|..+...|.+.| ++||.
T Consensus 20 ~v~C~~CKk~lqKGQtAyqrkGs~~LFCS 48 (62)
T 2das_A 20 KITCANCKKPLQKGQTAYQRKGSAHLFCS 48 (62)
T ss_dssp SCBCTTTCCBCCTTSCCEECTTCCCEESS
T ss_pred ccChhhccchhhcCceeeeecCchhheec
Confidence 3578888888877766666544 56663
No 58
>2gvi_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.87A {Thermoplasma acidophilum} SCOP: d.81.3.1 g.39.1.18
Probab=84.78 E-value=0.31 Score=25.95 Aligned_cols=30 Identities=23% Similarity=0.415 Sum_probs=22.2
Q ss_pred cccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 36 CLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 36 cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
-..|..|+-...... ....+|+.+|..|+.
T Consensus 172 ~~~C~~CGE~~~~~~-~~~~~g~~~C~~C~~ 201 (204)
T 2gvi_A 172 KVRCDVCGEYTYEAD-AKLLNGKPVCKPDYY 201 (204)
T ss_dssp EEECTTTCCEEEGGG-CEEETTEEECHHHHH
T ss_pred ceECCCCCCchhhcc-eeeeCCcEEChhhhc
Confidence 357888988775532 245789999999985
No 59
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=84.09 E-value=0.7 Score=19.60 Aligned_cols=42 Identities=17% Similarity=0.417 Sum_probs=26.7
Q ss_pred cCCccccccCccccCceeeeecCceeccccc--------cccccccccCC
Q psy10221 7 TELRYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
.....|.-|...+.+...+..=+..||..|. .|-.|..++..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 3456788898887764333344566776665 36677777654
No 60
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=82.21 E-value=1.4 Score=18.34 Aligned_cols=27 Identities=11% Similarity=0.255 Sum_probs=12.9
Q ss_pred cccccccccCCCCceeeeCCeecchhh
Q psy10221 38 RCCICQLVLDRHPSCFIKDEAVYCKQD 64 (67)
Q Consensus 38 ~C~~C~~~l~~~~~~~~~~~~~~C~~~ 64 (67)
+|+.|+++-..........+...|..|
T Consensus 13 ~CSFCGk~~~ev~~LIaGpgv~IC~eC 39 (51)
T 2ds5_A 13 YCSFCGKSQHEVRKLIAGPSVYICDEC 39 (51)
T ss_dssp BCTTTCCBTTTSSCEEECSSCEEEHHH
T ss_pred EecCCCCCHHHhcccCCCCCCEehHHH
Confidence 566666665544432222333445544
No 61
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=82.19 E-value=1.3 Score=19.56 Aligned_cols=11 Identities=18% Similarity=0.528 Sum_probs=5.1
Q ss_pred cccccccccCC
Q psy10221 38 RCCICQLVLDR 48 (67)
Q Consensus 38 ~C~~C~~~l~~ 48 (67)
+|+.|+++-..
T Consensus 20 ~CSFCGK~e~e 30 (67)
T 1ovx_A 20 YCSFCGKSQHE 30 (67)
T ss_dssp CCTTTCCCTTT
T ss_pred EecCCCCCHHH
Confidence 34555544443
No 62
>2dmj_A Poly (ADP-ribose) polymerase family, member 1; zinc finger, PARP-1, ADPRT, NAD(+) ADP-ribosyltransferase 1, poly(ADP-ribose) synthetase 1; NMR {Homo sapiens}
Probab=81.76 E-value=0.82 Score=21.88 Aligned_cols=31 Identities=26% Similarity=0.553 Sum_probs=19.5
Q ss_pred CCccccccCccccCcee-eee----c------Cceecccccc
Q psy10221 8 ELRYCVACGESITDKYL-LQV----S------DKSWHAQCLR 38 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~-~~~----~------~~~~h~~cf~ 38 (67)
+-..|..|++.|...++ +.. . ...+|..||.
T Consensus 24 ~Ra~Ck~C~~kI~KgelRig~~v~~~~~~g~~~~W~H~~Cf~ 65 (106)
T 2dmj_A 24 GRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFW 65 (106)
T ss_dssp SCCBCSSSCCBCCTTCEEEEEEEEETTTTEEEEEEEETTHHH
T ss_pred CCCcchhhCCccCCCCEEEEEEecCCCCCCCcCEeECcCccc
Confidence 34689999999985443 211 0 1346888876
No 63
>1v9x_A Poly (ADP-ribose) polymerase; PARP, DNA repair, inflammation, cell death, structural genomics; NMR {Arabidopsis thaliana}
Probab=80.38 E-value=1.6 Score=21.25 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=20.0
Q ss_pred cCCccccccCccccCcee-eeec----------Cceecccccc
Q psy10221 7 TELRYCVACGESITDKYL-LQVS----------DKSWHAQCLR 38 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~-~~~~----------~~~~h~~cf~ 38 (67)
.+-..|..|++.|...++ +... ...+|..||.
T Consensus 18 S~RA~Ck~Ck~kI~KgeLRiG~~v~~~~~dG~~~~W~H~~Cf~ 60 (114)
T 1v9x_A 18 SSRSSCKTCKSVINKENFRLGKLVQSTHFDGIMPMWNHASCIL 60 (114)
T ss_dssp CSCCBCSSSCCBCCSSSEEEEECCCCSSSSCCCCEEEEHHHHH
T ss_pred CCCCCchhhCCccCCCCEEEEEEecCcccCCCcceeECccccc
Confidence 344689999999985443 2211 2245788875
No 64
>3odc_A Poly [ADP-ribose] polymerase 1; protein-DNA complex, PARP zinc finger, DNA binding protein-D complex; 2.80A {Homo sapiens} PDB: 3ode_A 2l31_A
Probab=75.78 E-value=1.4 Score=21.31 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=12.9
Q ss_pred cCCccccccCccccCce
Q psy10221 7 TELRYCVACGESITDKY 23 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~ 23 (67)
++-..|..|++.|...+
T Consensus 17 S~Ra~Ck~C~~kI~Kg~ 33 (111)
T 3odc_A 17 SNRSTCKGCMEKIEKGQ 33 (111)
T ss_dssp SSCCBCTTTCCBCCTTC
T ss_pred cCCccccccCCCccCCc
Confidence 44578999999998443
No 65
>3od8_A Poly [ADP-ribose] polymerase 1; protein-DNA complex, PARP zinc finger, DNA binding protein-D complex; 2.40A {Homo sapiens} PDB: 3oda_A 4dqy_A*
Probab=75.76 E-value=1.3 Score=21.61 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=20.6
Q ss_pred cCCccccccCccccCcee-eee-------cC---ceeccccccc
Q psy10221 7 TELRYCVACGESITDKYL-LQV-------SD---KSWHAQCLRC 39 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~-~~~-------~~---~~~h~~cf~C 39 (67)
.+-..|..|++.|...++ +.. .+ ..+|..||.=
T Consensus 36 S~RA~Ck~C~~kI~KgeLRiG~~v~~~~~~G~~~~WyH~~Cf~~ 79 (116)
T 3od8_A 36 SGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWK 79 (116)
T ss_dssp SSCCBCTTTCCBCCTTSEEEEEEEECSSSSSEEEEEEEHHHHHH
T ss_pred cCCccCcccCCccCCCCEEEEEEeccCCcCCCCCeeECCccChh
Confidence 345789999999985433 211 12 2468888763
No 66
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=72.65 E-value=3.9 Score=16.27 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=17.2
Q ss_pred CCccccccCccccCc---eeeeecCceeccccc
Q psy10221 8 ELRYCVACGESITDK---YLLQVSDKSWHAQCL 37 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~---~~~~~~~~~~h~~cf 37 (67)
....|..|...+.+. ..+..=+..||..|+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci 36 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCY 36 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHH
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHH
Confidence 346788888887542 122233556666664
No 67
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.52 E-value=4.7 Score=17.35 Aligned_cols=30 Identities=33% Similarity=0.750 Sum_probs=18.6
Q ss_pred CCccccccCccccCceeeee--cCceeccccc
Q psy10221 8 ELRYCVACGESITDKYLLQV--SDKSWHAQCL 37 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~--~~~~~h~~cf 37 (67)
+...|.-|...+.+...+.. =+..||..|+
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci 53 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCV 53 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHH
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHH
Confidence 44678888888775433322 3556777665
No 68
>1uw0_A DNA ligase III; DNA repair, zinc finger, PARP-like finger, cell division, DNA replication, nuclear protein; HET: DNA; NMR {Homo sapiens} SCOP: g.39.1.12
Probab=70.67 E-value=2 Score=20.88 Aligned_cols=17 Identities=24% Similarity=0.372 Sum_probs=12.8
Q ss_pred cCCccccccCccccCce
Q psy10221 7 TELRYCVACGESITDKY 23 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~ 23 (67)
.+-..|.+|++.|...+
T Consensus 13 SgRA~Ck~C~~kI~Kge 29 (117)
T 1uw0_A 13 RGTAGCKKCKEKIVKGV 29 (117)
T ss_dssp SSCEECTTSSCEECTTC
T ss_pred CCCccchhhCcccCCCC
Confidence 34568999999998543
No 69
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.19 E-value=0.94 Score=19.61 Aligned_cols=14 Identities=21% Similarity=0.705 Sum_probs=7.8
Q ss_pred ceeccccccccccccc
Q psy10221 30 KSWHAQCLRCCICQLV 45 (67)
Q Consensus 30 ~~~h~~cf~C~~C~~~ 45 (67)
..+|+ ..|..|++.
T Consensus 7 ~v~H~--~~Cd~C~~~ 20 (63)
T 2e5r_A 7 GVFHP--VECSYCHSE 20 (63)
T ss_dssp SCCSC--SCCSSSCCC
T ss_pred CceeC--CCCcCCCCc
Confidence 34455 566666653
No 70
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=69.88 E-value=0.93 Score=20.01 Aligned_cols=11 Identities=27% Similarity=0.754 Sum_probs=8.1
Q ss_pred eCCeecchhhh
Q psy10221 55 KDEAVYCKQDY 65 (67)
Q Consensus 55 ~~~~~~C~~~y 65 (67)
=++.+||..||
T Consensus 25 CdgDLYC~rC~ 35 (67)
T 2d8v_A 25 CDGDLYCARCF 35 (67)
T ss_dssp TTSEEECSSHH
T ss_pred CCCceehHHHH
Confidence 46778888776
No 71
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.69 E-value=4 Score=17.46 Aligned_cols=40 Identities=20% Similarity=0.558 Sum_probs=25.3
Q ss_pred CccccccCccccCceeeeecCceeccccc--------cccccccccCC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
...|..|...+.+...+..=+..|+..|. .|-.|...+..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 15 YILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp GGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred CCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 35788898887764333345666666664 46667776654
No 72
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.69 E-value=5.7 Score=17.56 Aligned_cols=32 Identities=22% Similarity=0.525 Sum_probs=19.0
Q ss_pred cCCccccccCccccCc-------------eeee-ecCceecccccc
Q psy10221 7 TELRYCVACGESITDK-------------YLLQ-VSDKSWHAQCLR 38 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~-------------~~~~-~~~~~~h~~cf~ 38 (67)
.....|+-|...+.+. .++. .=+..||..|+.
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~ 58 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMS 58 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHH
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHH
Confidence 3456688888777531 1122 246778888863
No 73
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=68.23 E-value=0.72 Score=18.68 Aligned_cols=16 Identities=6% Similarity=0.185 Sum_probs=12.0
Q ss_pred eeeeCCeecchhhhcC
Q psy10221 52 CFIKDEAVYCKQDYAK 67 (67)
Q Consensus 52 ~~~~~~~~~C~~~y~k 67 (67)
+...+-+++|..||.|
T Consensus 22 ~mSVnTQP~CHEC~er 37 (49)
T 2eqg_A 22 FMSVNTQPLCHECSER 37 (49)
T ss_dssp BCCTTTTTSCHHHHHH
T ss_pred EEEecCccchHHHHHH
Confidence 3446889999999853
No 74
>2lbz_A Thuricin17, thurincin H; helical loops, crosslinked, antimicrobial protein; HET: DSG 2TL DSN; NMR {Bacillus thuringiensis}
Probab=68.01 E-value=2.5 Score=15.18 Aligned_cols=13 Identities=38% Similarity=0.935 Sum_probs=9.6
Q ss_pred ccccccccccccC
Q psy10221 35 QCLRCCICQLVLD 47 (67)
Q Consensus 35 ~cf~C~~C~~~l~ 47 (67)
.|+.|..|+..|-
T Consensus 6 sclvcaacsvell 18 (31)
T 2lbz_A 6 SCLVCAACSVELL 18 (31)
T ss_dssp GGGGGGGCCSCSG
T ss_pred HHHHHHHhHHHHH
Confidence 5788888887664
No 75
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=67.79 E-value=2.7 Score=17.26 Aligned_cols=41 Identities=17% Similarity=0.500 Sum_probs=24.9
Q ss_pred CccccccCccccCce------eeeecCceeccccc--------cccccccccCCC
Q psy10221 9 LRYCVACGESITDKY------LLQVSDKSWHAQCL--------RCCICQLVLDRH 49 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~------~~~~~~~~~h~~cf--------~C~~C~~~l~~~ 49 (67)
...|..|...+.+.. .+..=+..||..|+ .|-.|..++...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 346777777765421 23344667777776 467777777643
No 76
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=66.95 E-value=4.6 Score=17.46 Aligned_cols=31 Identities=19% Similarity=0.427 Sum_probs=18.6
Q ss_pred cCCccccccCccccCc-eeeeec---Cceeccccc
Q psy10221 7 TELRYCVACGESITDK-YLLQVS---DKSWHAQCL 37 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~-~~~~~~---~~~~h~~cf 37 (67)
.....|..|+++..+. ..+.-. ...||..|-
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cv 40 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICT 40 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhcc
Confidence 4456899999998743 334444 456787663
No 77
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=66.94 E-value=1.3 Score=17.73 Aligned_cols=13 Identities=31% Similarity=0.820 Sum_probs=10.2
Q ss_pred ccccccCccccCc
Q psy10221 10 RYCVACGESITDK 22 (67)
Q Consensus 10 ~~C~~C~~~i~~~ 22 (67)
..|..|+++|.-.
T Consensus 18 RvC~~CgkPi~ls 30 (44)
T 2lo3_A 18 RVCEKCGKPLALT 30 (44)
T ss_dssp EECTTTCCEEETT
T ss_pred hhhcccCCcchHH
Confidence 5799999998743
No 78
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=61.68 E-value=3.9 Score=17.22 Aligned_cols=42 Identities=17% Similarity=0.451 Sum_probs=25.7
Q ss_pred cCCccccccCccccCc----e--eeeecCceeccccc--------cccccccccCC
Q psy10221 7 TELRYCVACGESITDK----Y--LLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~----~--~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
.+...|..|...+.+. . .+..=+..||..|+ .|-.|..++..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 3456788888877542 1 22234566777765 56677776654
No 79
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=61.08 E-value=9.1 Score=16.28 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=23.2
Q ss_pred ccccCCccccc--cCccccCceeeeecCceeccccccccccccc
Q psy10221 4 TIITELRYCVA--CGESITDKYLLQVSDKSWHAQCLRCCICQLV 45 (67)
Q Consensus 4 ~~~~~~~~C~~--C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~ 45 (67)
....+..+|.+ |...|-+--.+...++.| +|..|...
T Consensus 4 ~~~~~pvRC~r~~CraylNP~~~~~~~~~~W-----~C~~C~~~ 42 (59)
T 2yrc_A 4 GSSGEPVLCSRTTCRAVLNPLCQVDYRAKLW-----ACNFCYQR 42 (59)
T ss_dssp SSCCCCCBCSCTTTCCBCCTTSEEEGGGTEE-----ECSSSCCE
T ss_pred cCCCCCcccCCCCCCeEECCceEEECCCCEE-----EcccCCCc
Confidence 34556678988 887776643344445666 56666654
No 80
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=59.50 E-value=4.5 Score=12.74 Aligned_cols=12 Identities=17% Similarity=0.681 Sum_probs=7.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++....
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 467777776643
No 81
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.19 E-value=3.9 Score=17.06 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=16.9
Q ss_pred CCccccccCccccCc----e--eeeecCceeccccc
Q psy10221 8 ELRYCVACGESITDK----Y--LLQVSDKSWHAQCL 37 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~----~--~~~~~~~~~h~~cf 37 (67)
....|..|...+.+. . .+..=+..||..|+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci 49 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCL 49 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHH
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHH
Confidence 345688888776542 1 22233556666665
No 82
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=59.15 E-value=10 Score=16.27 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=25.6
Q ss_pred CCccccccCccccCceeee--ecCceecccccc--------ccccccccCC
Q psy10221 8 ELRYCVACGESITDKYLLQ--VSDKSWHAQCLR--------CCICQLVLDR 48 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~--~~~~~~h~~cf~--------C~~C~~~l~~ 48 (67)
....|..|...+.+...+. .=+..||..|+. |-.|...+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 3467999988887543332 335667777753 6667666654
No 83
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.23 E-value=9.3 Score=16.16 Aligned_cols=29 Identities=10% Similarity=0.303 Sum_probs=17.8
Q ss_pred CCccccccCccccCceeeeecCceeccccc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCL 37 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf 37 (67)
....|..|...+.+. ++..=+..||..|+
T Consensus 14 ~~~~C~IC~~~~~~~-~~~~CgH~fC~~Ci 42 (71)
T 2d8t_A 14 TVPECAICLQTCVHP-VSLPCKHVFCYLCV 42 (71)
T ss_dssp SCCBCSSSSSBCSSE-EEETTTEEEEHHHH
T ss_pred CCCCCccCCcccCCC-EEccCCCHHHHHHH
Confidence 345788898887664 33344555666553
No 84
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=57.61 E-value=6.1 Score=18.69 Aligned_cols=41 Identities=17% Similarity=0.450 Sum_probs=19.6
Q ss_pred CCccccccCccccCc----e--eeeecCceeccccc--------cccccccccCC
Q psy10221 8 ELRYCVACGESITDK----Y--LLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~----~--~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
+...|.-|...+.+. . .+..=+..||..|+ .|-.|...+..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 344566666555432 0 22223445555444 45556666544
No 85
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=57.61 E-value=10 Score=15.81 Aligned_cols=40 Identities=18% Similarity=0.450 Sum_probs=23.0
Q ss_pred CCccccccCccccCceee--eecCceecccccc--------ccccccccC
Q psy10221 8 ELRYCVACGESITDKYLL--QVSDKSWHAQCLR--------CCICQLVLD 47 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~--~~~~~~~h~~cf~--------C~~C~~~l~ 47 (67)
....|..|...+.....+ ..=+..||..|+. |-.|...+.
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 62 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCcccc
Confidence 346788898877643222 2335667776653 555555553
No 86
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.85 E-value=11 Score=15.96 Aligned_cols=40 Identities=23% Similarity=0.585 Sum_probs=25.3
Q ss_pred CccccccCccccCceeee--ecCceeccccc--------cccccccccCC
Q psy10221 9 LRYCVACGESITDKYLLQ--VSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~--~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
...|..|...+.+...+. .=+..||..|+ .|-.|..++..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccc
Confidence 467999988887543332 33566777775 45667666654
No 87
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=56.69 E-value=5.2 Score=12.77 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=8.0
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 1ard_A 3 FVCEVCTRAFAR 14 (29)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCcccCC
Confidence 567777776643
No 88
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.83 E-value=6.6 Score=16.51 Aligned_cols=38 Identities=26% Similarity=0.645 Sum_probs=23.2
Q ss_pred CccccccCccccCceeeeecCceeccccc--------cccccccccCC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
...|..|...+.+ .+..=+..||..|+ .|-.|..++..
T Consensus 15 ~~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 15 EEECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTC
T ss_pred CCCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccC
Confidence 4578888887766 34444556666664 25556665543
No 89
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=54.39 E-value=2.7 Score=22.22 Aligned_cols=25 Identities=12% Similarity=0.307 Sum_probs=16.6
Q ss_pred ccccccccccccCCCCceeeeCCeecchhhhc
Q psy10221 35 QCLRCCICQLVLDRHPSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 35 ~cf~C~~C~~~l~~~~~~~~~~~~~~C~~~y~ 66 (67)
.-..|..|+-.... .|+.+|..|+.
T Consensus 162 ~~~~C~~CGE~~~~-------~g~~~C~~C~~ 186 (191)
T 3d00_A 162 KIVLCPQCREAYPA-------QDGELCLSCQG 186 (191)
T ss_dssp CEEECTTTCCEEEG-------GGCSSCHHHHT
T ss_pred CCEECCcCCCChhh-------CCCcCCccccC
Confidence 34568888754432 27889999875
No 90
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.36 E-value=4.1 Score=13.00 Aligned_cols=12 Identities=17% Similarity=0.589 Sum_probs=7.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++.+..
T Consensus 4 ~~C~~C~k~f~~ 15 (27)
T 2kvh_A 4 FSCSLCPQRSRD 15 (27)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCcChhhCC
Confidence 567777776543
No 91
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.30 E-value=8.4 Score=16.01 Aligned_cols=27 Identities=11% Similarity=0.257 Sum_probs=14.2
Q ss_pred CccccccCccccCceeeeecCceecccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQC 36 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~c 36 (67)
...|..|...+.+.. ...=+..|+..|
T Consensus 15 ~~~C~IC~~~~~~p~-~~~CgH~fC~~C 41 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPK-QTECGHRFCESC 41 (66)
T ss_dssp CEECTTTCCEESSCC-CCSSSCCCCHHH
T ss_pred CCCCCCCChHhcCee-ECCCCCHHHHHH
Confidence 456888877776542 223334444443
No 92
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=52.95 E-value=7 Score=17.78 Aligned_cols=38 Identities=16% Similarity=0.467 Sum_probs=23.0
Q ss_pred ccccccCccccCceeeeecCceeccccc--------cccccccccC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLD 47 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~ 47 (67)
..|.-|...+.+...+..=+..|+..|+ .|-.|...+.
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVT 68 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCC
Confidence 4688888877764222234566666664 4666666654
No 93
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=52.67 E-value=6.6 Score=12.65 Aligned_cols=12 Identities=25% Similarity=0.791 Sum_probs=8.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 567788776654
No 94
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=51.60 E-value=0.52 Score=21.54 Aligned_cols=38 Identities=26% Similarity=0.505 Sum_probs=22.3
Q ss_pred cccccCccccCceeeeecCceeccccccccccccccCC
Q psy10221 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR 48 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~ 48 (67)
.|..|+..|.-..+-....+.....-|.|.+|+..+..
T Consensus 12 ~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~ 49 (79)
T 1wjv_A 12 TCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWG 49 (79)
T ss_dssp EESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred EcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCC
Confidence 58889888875433222222222234888888887753
No 95
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.29 E-value=4.3 Score=16.71 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=20.7
Q ss_pred ccccccCccccCceeeeecCceeccccccccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~l~~ 48 (67)
-.|..|++.......+.. ..-|.|..|++....
T Consensus 19 ~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~ 51 (73)
T 2ctu_A 19 QKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQ 51 (73)
T ss_dssp EECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSC
T ss_pred eeCCcccchhCCHHHhCc------CCCCCCCCCChhhcC
Confidence 367888887764333322 344788888877654
No 96
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=50.16 E-value=7.6 Score=12.34 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=8.2
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++.+..
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 567778776654
No 97
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 4fip_D 4fjc_D 4fk5_E 3m99_D
Probab=49.94 E-value=3.5 Score=19.48 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=11.4
Q ss_pred CCccccccCccccCc
Q psy10221 8 ELRYCVACGESITDK 22 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~ 22 (67)
.-.+|..|++||...
T Consensus 74 ~YRvCn~CGkPI~l~ 88 (96)
T 3mhs_E 74 QYRVCEKCGKPLALT 88 (96)
T ss_dssp CCEEETTTCCEECGG
T ss_pred cchhhhccCCceeHH
Confidence 346899999999743
No 98
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=49.82 E-value=7.9 Score=12.16 Aligned_cols=12 Identities=17% Similarity=0.592 Sum_probs=7.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++.+..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 467777776644
No 99
>4av1_A Poly [ADP-ribose] polymerase 1; transferase, PARP1, DNA-binding domain, DBD, DNA repair, CAN poly- ADP(ribosyl)ation; 3.10A {Homo sapiens} PDB: 2l30_A
Probab=49.09 E-value=8.3 Score=20.94 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=20.5
Q ss_pred cCCccccccCccccCcee-eee-------c---Cceeccccccc
Q psy10221 7 TELRYCVACGESITDKYL-LQV-------S---DKSWHAQCLRC 39 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~-~~~-------~---~~~~h~~cf~C 39 (67)
++-..|..|++.|...++ +.. . ...+|..||.=
T Consensus 37 S~RA~Ck~Ck~kI~Kg~LRig~~v~~~~~dG~~~~W~H~~Cf~~ 80 (223)
T 4av1_A 37 SGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWK 80 (223)
T ss_dssp STTCBCTTTCCBCCTTCEEEEEEEEETTTTEEEEEEEEHHHHTT
T ss_pred CCCccCcccCCccCCCceEEEEEecCCCCCCCCceeEChhhhhh
Confidence 345789999999985433 211 0 13468888763
No 100
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=49.00 E-value=5.8 Score=12.63 Aligned_cols=12 Identities=17% Similarity=0.589 Sum_probs=7.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++....
T Consensus 4 ~~C~~C~k~f~~ 15 (28)
T 2kvf_A 4 YSCSVCGKRFSL 15 (28)
T ss_dssp EECSSSCCEESC
T ss_pred ccCCCCCcccCC
Confidence 567777776543
No 101
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.75 E-value=16 Score=15.80 Aligned_cols=38 Identities=18% Similarity=0.528 Sum_probs=24.8
Q ss_pred CccccccCccccCceeeeecCceeccccc--------cccccccccC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLD 47 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~ 47 (67)
...|..|...+.+. ++..=+..|+..|+ .|-.|..++.
T Consensus 15 ~~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 15 PFRCFICRQAFQNP-VVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CSBCSSSCSBCCSE-EECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCcCCCchhcCe-eEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 35788998888764 34444566666664 4667777764
No 102
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=48.31 E-value=5.9 Score=12.56 Aligned_cols=11 Identities=27% Similarity=0.673 Sum_probs=6.9
Q ss_pred ccccccccccC
Q psy10221 37 LRCCICQLVLD 47 (67)
Q Consensus 37 f~C~~C~~~l~ 47 (67)
|.|..|++...
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 46777776554
No 103
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=47.42 E-value=6.2 Score=12.60 Aligned_cols=12 Identities=17% Similarity=0.517 Sum_probs=7.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++.+..
T Consensus 4 ~~C~~C~~~f~~ 15 (30)
T 2m0d_A 4 YQCDYCGRSFSD 15 (30)
T ss_dssp EECTTTCCEESC
T ss_pred ccCCCCCcccCC
Confidence 567777776543
No 104
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=47.36 E-value=6.4 Score=12.56 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=7.9
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 567777776654
No 105
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=46.95 E-value=19 Score=16.07 Aligned_cols=28 Identities=14% Similarity=0.392 Sum_probs=15.9
Q ss_pred ccccccCccccCceeee--ecCceeccccc
Q psy10221 10 RYCVACGESITDKYLLQ--VSDKSWHAQCL 37 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~--~~~~~~h~~cf 37 (67)
..|..|...+.....+. .=+..||..|+
T Consensus 41 ~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci 70 (91)
T 2l0b_A 41 MCCPICCSEYVKGDVATELPCHHYFHKPCV 70 (91)
T ss_dssp SEETTTTEECCTTCEEEEETTTEEEEHHHH
T ss_pred CCCcccChhhcCCCcEEecCCCChHHHHHH
Confidence 46888877776433322 23455666664
No 106
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.56 E-value=4.1 Score=12.85 Aligned_cols=12 Identities=17% Similarity=0.310 Sum_probs=8.5
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~k~f~~ 14 (26)
T 2lvu_A 3 YVCERCGKRFVQ 14 (26)
Confidence 567788877654
No 107
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=45.96 E-value=17 Score=15.81 Aligned_cols=28 Identities=29% Similarity=0.562 Sum_probs=16.2
Q ss_pred cccccCccccCceeeee--cCceecccccc
Q psy10221 11 YCVACGESITDKYLLQV--SDKSWHAQCLR 38 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~--~~~~~h~~cf~ 38 (67)
.|..|++.-.+..++.- =.+.||..|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCC
Confidence 35566765444434432 24679998874
No 108
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=45.78 E-value=14 Score=17.55 Aligned_cols=38 Identities=26% Similarity=0.597 Sum_probs=24.3
Q ss_pred ccccccCccccCceeeeecCceeccccc---------cccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL---------RCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf---------~C~~C~~~l~~ 48 (67)
..|..|...+.+. +...=+..|+..|+ .|-.|..++..
T Consensus 53 ~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVFRP-ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCSSE-EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHcCc-EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 4688888877764 33344556666664 66677777654
No 109
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=45.23 E-value=15 Score=17.92 Aligned_cols=36 Identities=22% Similarity=0.628 Sum_probs=23.0
Q ss_pred cccccCccccCceeeeecCceeccccc--------cccccccccC
Q psy10221 11 YCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLD 47 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~ 47 (67)
.|.-|...+.+. ++..=+..|+..|. .|-.|..++.
T Consensus 55 ~C~iC~~~~~~~-~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 55 QCIICSEYFIEA-VTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp BCTTTCSBCSSE-EEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred CCcccCcccCCc-eECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 588898887764 34444566666663 3566666664
No 110
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.22 E-value=19 Score=16.00 Aligned_cols=28 Identities=25% Similarity=0.557 Sum_probs=14.9
Q ss_pred cccccCccccCceeee--ecCceecccccc
Q psy10221 11 YCVACGESITDKYLLQ--VSDKSWHAQCLR 38 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~--~~~~~~h~~cf~ 38 (67)
.|..|++.-....++. .=+..||..|+.
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLN 57 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccC
Confidence 4556665443333333 224678888764
No 111
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.21 E-value=9.9 Score=12.94 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=8.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++.+..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elr_A 10 HLCDMCGKKFKS 21 (36)
T ss_dssp CBCTTTCCBCSS
T ss_pred eecCcCCCCcCc
Confidence 678888877654
No 112
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=45.00 E-value=5.9 Score=12.67 Aligned_cols=11 Identities=27% Similarity=0.673 Sum_probs=7.2
Q ss_pred ccccccccccC
Q psy10221 37 LRCCICQLVLD 47 (67)
Q Consensus 37 f~C~~C~~~l~ 47 (67)
+.|..|++...
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 56777776654
No 113
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=44.69 E-value=23 Score=16.72 Aligned_cols=29 Identities=24% Similarity=0.544 Sum_probs=17.6
Q ss_pred CccccccCccccC-ceeeeec---Cceeccccc
Q psy10221 9 LRYCVACGESITD-KYLLQVS---DKSWHAQCL 37 (67)
Q Consensus 9 ~~~C~~C~~~i~~-~~~~~~~---~~~~h~~cf 37 (67)
.-.|..|.++..+ ...+.-. ...||..|-
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CV 35 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECT 35 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccC
Confidence 3468899998653 2334433 455787664
No 114
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=44.42 E-value=10 Score=13.08 Aligned_cols=12 Identities=25% Similarity=0.681 Sum_probs=8.8
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 12 ~~C~~C~k~f~~ 23 (37)
T 1p7a_A 12 FQCPDCDRSFSR 23 (37)
T ss_dssp BCCTTTCCCBSS
T ss_pred ccCCCCCcccCc
Confidence 778888876653
No 115
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=44.18 E-value=12 Score=14.92 Aligned_cols=28 Identities=32% Similarity=0.669 Sum_probs=15.9
Q ss_pred cccccCccccCceeeee--cCceecccccc
Q psy10221 11 YCVACGESITDKYLLQV--SDKSWHAQCLR 38 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~--~~~~~h~~cf~ 38 (67)
.|..|++.-.+..++.= =++.||..|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~ 31 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLR 31 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCC
Confidence 46677765443333332 24678988864
No 116
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=50.05 E-value=4.8 Score=13.02 Aligned_cols=12 Identities=25% Similarity=0.504 Sum_probs=8.8
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 678888887654
No 117
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=43.13 E-value=11 Score=16.46 Aligned_cols=14 Identities=14% Similarity=0.166 Sum_probs=8.9
Q ss_pred cCCccccccCcccc
Q psy10221 7 TELRYCVACGESIT 20 (67)
Q Consensus 7 ~~~~~C~~C~~~i~ 20 (67)
...-.|..|+.++.
T Consensus 8 LeiL~CP~ck~~L~ 21 (67)
T 2jny_A 8 LEVLACPKDKGPLR 21 (67)
T ss_dssp TCCCBCTTTCCBCE
T ss_pred HHHhCCCCCCCcCe
Confidence 34457777877654
No 118
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=43.02 E-value=11 Score=12.82 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=8.0
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~k~F~~ 14 (33)
T 1rim_A 3 FACPECPKRFMR 14 (33)
T ss_dssp CCCSSSCCCCSS
T ss_pred ccCCCCCchhCC
Confidence 567777776643
No 119
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=42.75 E-value=22 Score=16.69 Aligned_cols=8 Identities=50% Similarity=1.132 Sum_probs=3.7
Q ss_pred ceeccccc
Q psy10221 30 KSWHAQCL 37 (67)
Q Consensus 30 ~~~h~~cf 37 (67)
+.||..|+
T Consensus 77 ~~yH~~Cl 84 (111)
T 2ysm_A 77 KGYHTFCL 84 (111)
T ss_dssp CEEEGGGS
T ss_pred cHHhHHhc
Confidence 34555444
No 120
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=42.70 E-value=5.8 Score=14.12 Aligned_cols=8 Identities=25% Similarity=0.551 Sum_probs=4.4
Q ss_pred Ceecchhh
Q psy10221 57 EAVYCKQD 64 (67)
Q Consensus 57 ~~~~C~~~ 64 (67)
.++||+.|
T Consensus 2 ~RpYCe~C 9 (26)
T 2hqh_E 2 SRPYCEIC 9 (26)
T ss_dssp --CEETTT
T ss_pred CCccchHH
Confidence 35778766
No 121
>2fqh_A Hypothetical protein TA0938; structural genomics, Zn-binding,, ontario centre for structural proteomics, OCSP, unknown function; NMR {Thermoplasma acidophilum}
Probab=42.61 E-value=18 Score=17.17 Aligned_cols=11 Identities=36% Similarity=0.842 Sum_probs=5.8
Q ss_pred cccccCccccC
Q psy10221 11 YCVACGESITD 21 (67)
Q Consensus 11 ~C~~C~~~i~~ 21 (67)
-|+-|+.+..+
T Consensus 19 GCALCG~tWg~ 29 (109)
T 2fqh_A 19 GCALCGATWGD 29 (109)
T ss_dssp SCSSCCCSCCC
T ss_pred ceeeeCCchHH
Confidence 35555555544
No 122
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.42 E-value=8 Score=13.07 Aligned_cols=12 Identities=17% Similarity=0.495 Sum_probs=8.4
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 2elx_A 8 YVCALCLKKFVS 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCcchhCC
Confidence 678888876643
No 123
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=42.41 E-value=19 Score=16.56 Aligned_cols=40 Identities=25% Similarity=0.572 Sum_probs=25.8
Q ss_pred CccccccCccccCceeeeecCceeccccc--------cccccccccCC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL--------RCCICQLVLDR 48 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf--------~C~~C~~~l~~ 48 (67)
...|..|...+.+...+..=+..|+..|+ .|-.|...+..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 45788898887764222245666766663 57777777654
No 124
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=41.88 E-value=8.2 Score=13.12 Aligned_cols=12 Identities=25% Similarity=0.639 Sum_probs=8.5
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 1srk_A 8 FVCRICLSAFTT 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCcccCC
Confidence 678888876653
No 125
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=41.85 E-value=12 Score=16.39 Aligned_cols=11 Identities=18% Similarity=0.546 Sum_probs=6.9
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
-.|..|+.++.
T Consensus 9 L~CP~ck~~L~ 19 (68)
T 2hf1_A 9 LVCPLCKGPLV 19 (68)
T ss_dssp CBCTTTCCBCE
T ss_pred eECCCCCCcCe
Confidence 46777776554
No 126
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=41.50 E-value=21 Score=16.81 Aligned_cols=38 Identities=13% Similarity=0.377 Sum_probs=25.0
Q ss_pred ccccccCccccCceeeeecCceeccccc---------cccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL---------RCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf---------~C~~C~~~l~~ 48 (67)
..|..|...+.+. +...=+..|+..|+ .|-.|..++..
T Consensus 19 ~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 19 YECPICLMALREA-VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GBCTTTCSBCSSE-EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCcCChhhcCe-EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 4788898887764 33344556666664 67777777754
No 127
>2kq9_A DNAK suppressor protein; zinc binding protein, structural genomics, PSI-2, protein ST initiative; NMR {Agrobacterium tumefaciens str}
Probab=41.27 E-value=1.4 Score=21.22 Aligned_cols=13 Identities=38% Similarity=1.048 Sum_probs=8.8
Q ss_pred CccccccCccccC
Q psy10221 9 LRYCVACGESITD 21 (67)
Q Consensus 9 ~~~C~~C~~~i~~ 21 (67)
-..|..|+++|..
T Consensus 81 yg~C~~Cg~~I~~ 93 (112)
T 2kq9_A 81 FGTCVKCGKRISE 93 (112)
T ss_dssp CSEETTTTEECCH
T ss_pred cCeeCCCCCcccH
Confidence 4567777777764
No 128
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=40.67 E-value=11 Score=16.58 Aligned_cols=13 Identities=15% Similarity=0.618 Sum_probs=8.3
Q ss_pred CCccccccCcccc
Q psy10221 8 ELRYCVACGESIT 20 (67)
Q Consensus 8 ~~~~C~~C~~~i~ 20 (67)
..-.|..|+.++.
T Consensus 7 ~iL~CP~ck~~L~ 19 (70)
T 2js4_A 7 DILVCPVCKGRLE 19 (70)
T ss_dssp CCCBCTTTCCBEE
T ss_pred hheECCCCCCcCE
Confidence 3456777777654
No 129
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=46.79 E-value=5.8 Score=12.77 Aligned_cols=12 Identities=17% Similarity=0.722 Sum_probs=8.5
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|++....
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 567888877654
No 130
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=40.50 E-value=13 Score=16.25 Aligned_cols=13 Identities=8% Similarity=0.312 Sum_probs=8.2
Q ss_pred CCccccccCcccc
Q psy10221 8 ELRYCVACGESIT 20 (67)
Q Consensus 8 ~~~~C~~C~~~i~ 20 (67)
..-.|..|+.++.
T Consensus 7 ~iL~CP~ck~~L~ 19 (68)
T 2jr6_A 7 DILVCPVTKGRLE 19 (68)
T ss_dssp CCCBCSSSCCBCE
T ss_pred hheECCCCCCcCe
Confidence 3456777776554
No 131
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=40.36 E-value=12 Score=16.66 Aligned_cols=12 Identities=33% Similarity=0.800 Sum_probs=8.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
.+|.+|++.+++
T Consensus 5 VRCFTCGkvi~~ 16 (70)
T 1twf_J 5 VRCFSCGKVVGD 16 (70)
T ss_dssp SBCTTTCCBCTT
T ss_pred eecCCCCCChHH
Confidence 367778888865
No 132
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=40.18 E-value=9.3 Score=13.78 Aligned_cols=12 Identities=25% Similarity=0.462 Sum_probs=8.6
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
+.|..|+..+.+
T Consensus 4 ~~CpvCk~q~Pd 15 (28)
T 2jvx_A 4 FCCPKCQYQAPD 15 (28)
T ss_dssp EECTTSSCEESS
T ss_pred ccCccccccCcC
Confidence 577788877765
No 133
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=39.72 E-value=9.8 Score=14.11 Aligned_cols=13 Identities=15% Similarity=0.544 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 8 p~~C~~CgK~F~~ 20 (36)
T 1fv5_A 8 RFMCLPCGIAFSS 20 (36)
T ss_dssp CCEETTTTEECSC
T ss_pred CeECCCCCCccCC
Confidence 3788888887764
No 134
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.20 E-value=10 Score=13.02 Aligned_cols=12 Identities=17% Similarity=0.849 Sum_probs=8.6
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elq_A 10 FKCSLCEYATRS 21 (36)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 678888876654
No 135
>2xzf_A Formamidopyrimidine-DNA glycosylase; hydrolase-DNA complex; HET: VET; 1.80A {Lactococcus lactis subsp} PDB: 1pm5_A* 1xc8_A* 1pji_A* 2xzu_A* 3c58_A* 1tdz_A* 1nnj_A 1kfv_A 1pjj_A*
Probab=39.00 E-value=9.2 Score=21.19 Aligned_cols=11 Identities=36% Similarity=0.924 Sum_probs=5.6
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
..|..|+.+|.
T Consensus 243 ~pC~~CG~~I~ 253 (271)
T 2xzf_A 243 EKCSRCGAEIQ 253 (271)
T ss_dssp SBCTTTCCBCE
T ss_pred CCCCCCCCEee
Confidence 34555555554
No 136
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=38.76 E-value=9.7 Score=21.08 Aligned_cols=11 Identities=36% Similarity=0.869 Sum_probs=5.9
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
..|..|+.+|.
T Consensus 236 ~pC~~CG~~I~ 246 (266)
T 1ee8_A 236 LPCPACGRPVE 246 (266)
T ss_dssp SBCTTTCCBCE
T ss_pred CCCCCCCCEee
Confidence 34555655554
No 137
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=38.52 E-value=8 Score=18.22 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=18.8
Q ss_pred eecccccccccccc-ccCCC-CceeeeCCeecchhhhc
Q psy10221 31 SWHAQCLRCCICQL-VLDRH-PSCFIKDEAVYCKQDYA 66 (67)
Q Consensus 31 ~~h~~cf~C~~C~~-~l~~~-~~~~~~~~~~~C~~~y~ 66 (67)
..|+. ..|..|+. ++.+. ..+..-.+--+|..||.
T Consensus 27 ~~H~g-v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~ 63 (98)
T 2dip_A 27 DKHLG-IPCNNCKQFPIEGKCYKCTECIEYHLCQECFD 63 (98)
T ss_dssp SSCCC-CCCSSSCCSSCCSCEEEESSSSSCEEEHHHHH
T ss_pred cccCC-CCCcCCCCCCcccCeEECCCCCCccHHHHHHc
Confidence 45654 67888886 44331 11112234557777764
No 138
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.47 E-value=14 Score=13.09 Aligned_cols=12 Identities=17% Similarity=0.598 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 11 ~~C~~C~k~f~~ 22 (42)
T 2yte_A 11 YSCAECKETFSD 22 (42)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCCccCC
Confidence 788888887654
No 139
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=38.24 E-value=9.6 Score=21.10 Aligned_cols=10 Identities=40% Similarity=0.963 Sum_probs=4.6
Q ss_pred cccccCcccc
Q psy10221 11 YCVACGESIT 20 (67)
Q Consensus 11 ~C~~C~~~i~ 20 (67)
.|..|+.+|.
T Consensus 242 pC~~CG~~I~ 251 (268)
T 1k82_A 242 PCRVCGTPIV 251 (268)
T ss_dssp BCTTTCCBCE
T ss_pred CCCCCCCEee
Confidence 3444444443
No 140
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=37.94 E-value=24 Score=15.42 Aligned_cols=26 Identities=12% Similarity=0.288 Sum_probs=17.3
Q ss_pred CCccccccCccccCcee---eeecCceec
Q psy10221 8 ELRYCVACGESITDKYL---LQVSDKSWH 33 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~---~~~~~~~~h 33 (67)
....|..|+..|+++.. +...++.++
T Consensus 3 ~~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~ 31 (66)
T 3j21_V 3 RWNVCSYCGKPFEPGTGKMYVRNDGRVLF 31 (66)
T ss_dssp CCCBCTTTCSBCCTTCCEEEECSSSCEEE
T ss_pred ceeEecCcCCcccCCCCeEEEecCCcEEE
Confidence 35689999999996543 334455554
No 141
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.83 E-value=10 Score=13.03 Aligned_cols=12 Identities=17% Similarity=0.675 Sum_probs=8.7
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 10 ~~C~~C~k~f~~ 21 (37)
T 2elo_A 10 YSCPVCEKSFSE 21 (37)
T ss_dssp CEETTTTEECSS
T ss_pred cCCCCCCCccCC
Confidence 678888877654
No 142
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=37.82 E-value=22 Score=13.87 Aligned_cols=30 Identities=20% Similarity=0.468 Sum_probs=17.6
Q ss_pred CCccccccCccccCceeeee---cCceeccccc
Q psy10221 8 ELRYCVACGESITDKYLLQV---SDKSWHAQCL 37 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~---~~~~~h~~cf 37 (67)
+...|.-|...+.+...+.. =+..||..|+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci 36 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECV 36 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHH
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHH
Confidence 34578888888775332222 3455666665
No 143
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=36.98 E-value=10 Score=20.87 Aligned_cols=10 Identities=40% Similarity=0.876 Sum_probs=4.7
Q ss_pred cccccCcccc
Q psy10221 11 YCVACGESIT 20 (67)
Q Consensus 11 ~C~~C~~~i~ 20 (67)
.|..|+.+|.
T Consensus 236 pC~~CG~~I~ 245 (262)
T 1k3x_A 236 PCERCGSIIE 245 (262)
T ss_dssp BCTTTCCBCE
T ss_pred CCCCCCCEeE
Confidence 3445554443
No 144
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=36.74 E-value=27 Score=14.61 Aligned_cols=31 Identities=16% Similarity=0.431 Sum_probs=19.0
Q ss_pred CCccccccCcccc--Cceeee--ecCceecccccc
Q psy10221 8 ELRYCVACGESIT--DKYLLQ--VSDKSWHAQCLR 38 (67)
Q Consensus 8 ~~~~C~~C~~~i~--~~~~~~--~~~~~~h~~cf~ 38 (67)
....|..|+..-. +..++. .=+..||..|..
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~ 39 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHT 39 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSS
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCC
Confidence 4567889987632 233333 235679988864
No 145
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.68 E-value=15 Score=13.22 Aligned_cols=13 Identities=15% Similarity=0.306 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2en7_A 12 PYVCNECGKAFRS 24 (44)
T ss_dssp SSCCTTTCCCCSS
T ss_pred CeECCCCCCccCC
Confidence 3788888887654
No 146
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=36.53 E-value=11 Score=21.00 Aligned_cols=9 Identities=44% Similarity=1.054 Sum_probs=4.3
Q ss_pred cccccCccc
Q psy10221 11 YCVACGESI 19 (67)
Q Consensus 11 ~C~~C~~~i 19 (67)
.|..|+.+|
T Consensus 247 pC~~CG~~I 255 (273)
T 3u6p_A 247 PCKRCGTPI 255 (273)
T ss_dssp BCTTTCCBC
T ss_pred CCCCCCCeE
Confidence 444444444
No 147
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.48 E-value=16 Score=12.99 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 11 ~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 11 PYRCDQCGKAFSQ 23 (42)
T ss_dssp SBCCTTTTCCBSS
T ss_pred CeeCCCccchhCC
Confidence 3788888887654
No 148
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=36.32 E-value=27 Score=15.56 Aligned_cols=27 Identities=30% Similarity=0.587 Sum_probs=14.3
Q ss_pred ccccCccccCceeee--ecCceecccccc
Q psy10221 12 CVACGESITDKYLLQ--VSDKSWHAQCLR 38 (67)
Q Consensus 12 C~~C~~~i~~~~~~~--~~~~~~h~~cf~ 38 (67)
|..|++.-.+..++. .=++.||..|+.
T Consensus 29 C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 3shb_A 29 CHLCGGRQDPDKQLMCDECDMAFHIYCLD 57 (77)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEETTTSS
T ss_pred CCccCCCCCCcceeEeCCCCCccCcccCC
Confidence 455555544333332 224678888764
No 149
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.12 E-value=16 Score=13.01 Aligned_cols=12 Identities=25% Similarity=0.587 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2eos_A 12 YPCEICGTRFRH 23 (42)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCCCCCccCC
Confidence 678888887654
No 150
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=36.06 E-value=28 Score=16.51 Aligned_cols=12 Identities=25% Similarity=0.875 Sum_probs=6.9
Q ss_pred cccccccccccc
Q psy10221 34 AQCLRCCICQLV 45 (67)
Q Consensus 34 ~~cf~C~~C~~~ 45 (67)
+.|-.|..|+..
T Consensus 56 ~~C~~C~~C~~~ 67 (114)
T 2kwj_A 56 IECKSCILCGTS 67 (114)
T ss_dssp GGGCCCTTTTCC
T ss_pred cccCccCccccc
Confidence 555566666554
No 151
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.99 E-value=8.9 Score=13.44 Aligned_cols=11 Identities=18% Similarity=0.416 Sum_probs=7.9
Q ss_pred ccccccccccC
Q psy10221 37 LRCCICQLVLD 47 (67)
Q Consensus 37 f~C~~C~~~l~ 47 (67)
|.|..|++...
T Consensus 10 ~~C~~C~k~f~ 20 (37)
T 2elm_A 10 YYCSQCHYSSI 20 (37)
T ss_dssp EECSSSSCEEE
T ss_pred eECCCCCcccC
Confidence 67888887654
No 152
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=35.77 E-value=23 Score=17.71 Aligned_cols=37 Identities=19% Similarity=0.487 Sum_probs=22.8
Q ss_pred cccccCccccCceeeeecCceeccccc---------cccccccccC
Q psy10221 11 YCVACGESITDKYLLQVSDKSWHAQCL---------RCCICQLVLD 47 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~~~~~~h~~cf---------~C~~C~~~l~ 47 (67)
.|..|...+.+...+..=+..|+..|+ .|-.|..++.
T Consensus 56 ~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 56 MCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp BCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 688888887764222244566666654 3666776664
No 153
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.75 E-value=12 Score=12.94 Aligned_cols=13 Identities=15% Similarity=0.736 Sum_probs=9.0
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elp_A 9 AMKCPYCDFYFMK 21 (37)
T ss_dssp CEECSSSSCEECS
T ss_pred CeECCCCChhhcc
Confidence 3678888876654
No 154
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.61 E-value=12 Score=12.71 Aligned_cols=12 Identities=17% Similarity=0.451 Sum_probs=8.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elt_A 10 YKCPQCSYASAI 21 (36)
T ss_dssp EECSSSSCEESS
T ss_pred CCCCCCCcccCC
Confidence 678888876543
No 155
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.37 E-value=12 Score=12.78 Aligned_cols=12 Identities=25% Similarity=0.722 Sum_probs=8.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elv_A 10 YDCHICERKFKN 21 (36)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCccCC
Confidence 677888876543
No 156
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=35.16 E-value=11 Score=12.67 Aligned_cols=10 Identities=20% Similarity=0.607 Sum_probs=6.9
Q ss_pred cccccccccc
Q psy10221 37 LRCCICQLVL 46 (67)
Q Consensus 37 f~C~~C~~~l 46 (67)
|.|..|++..
T Consensus 3 ~~C~~C~k~f 12 (32)
T 2kfq_A 3 FACPACPKRF 12 (32)
T ss_dssp SSSSSSCTTH
T ss_pred CCCCCCCccc
Confidence 5677777764
No 157
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.16 E-value=29 Score=14.44 Aligned_cols=27 Identities=11% Similarity=0.317 Sum_probs=14.5
Q ss_pred CccccccCccccCceeeeecCceecccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQC 36 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~c 36 (67)
...|..|...+.+. .+..=+..|+..|
T Consensus 20 ~~~C~IC~~~~~~~-~~~~CgH~fC~~C 46 (73)
T 2ysl_A 20 EVICPICLDILQKP-VTIDCGHNFCLKC 46 (73)
T ss_dssp CCBCTTTCSBCSSE-EECTTCCEEEHHH
T ss_pred CCEeccCCcccCCe-EEcCCCChhhHHH
Confidence 45788888777654 2223344444444
No 158
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.65 E-value=18 Score=13.20 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2enf_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 3788889887654
No 159
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.61 E-value=18 Score=13.23 Aligned_cols=13 Identities=23% Similarity=0.508 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emg_A 12 PFICSECGKVFTH 24 (46)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CEECCccCcccCC
Confidence 3788889887654
No 160
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.60 E-value=12 Score=12.75 Aligned_cols=12 Identities=25% Similarity=0.622 Sum_probs=8.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2els_A 10 FTCEYCNKVFKF 21 (36)
T ss_dssp EECTTTCCEESS
T ss_pred EECCCCCceeCC
Confidence 677778776543
No 161
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=34.58 E-value=12 Score=13.14 Aligned_cols=12 Identities=17% Similarity=0.633 Sum_probs=8.6
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 7 ~~C~~C~k~f~~ 18 (39)
T 1njq_A 7 YTCSFCKREFRS 18 (39)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCcccCC
Confidence 678888877654
No 162
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=34.03 E-value=7.7 Score=15.98 Aligned_cols=8 Identities=25% Similarity=0.750 Sum_probs=4.7
Q ss_pred cccccCcc
Q psy10221 11 YCVACGES 18 (67)
Q Consensus 11 ~C~~C~~~ 18 (67)
.|..|++.
T Consensus 8 ~Cd~C~~~ 15 (52)
T 1tot_A 8 TCNECKHH 15 (52)
T ss_dssp EETTTTEE
T ss_pred ECCCCCCC
Confidence 46666654
No 163
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=33.80 E-value=21 Score=15.05 Aligned_cols=17 Identities=18% Similarity=0.458 Sum_probs=13.0
Q ss_pred ccCCccccccCccccCc
Q psy10221 6 ITELRYCVACGESITDK 22 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~~~ 22 (67)
......|..|+.+|+-.
T Consensus 3 ~~~~k~CP~C~~~Iek~ 19 (60)
T 1wd2_A 3 AANTKECPKCHVTIEKD 19 (60)
T ss_dssp CCCCCCCTTTCCCCSSC
T ss_pred cccceECcCCCCeeEeC
Confidence 34567899999999753
No 164
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.71 E-value=19 Score=13.17 Aligned_cols=13 Identities=23% Similarity=0.925 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em6_A 12 CYKCDVCGKEFSQ 24 (46)
T ss_dssp CCBCSSSCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 3788889887654
No 165
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=33.65 E-value=14 Score=16.19 Aligned_cols=12 Identities=17% Similarity=0.562 Sum_probs=7.9
Q ss_pred CccccccCcccc
Q psy10221 9 LRYCVACGESIT 20 (67)
Q Consensus 9 ~~~C~~C~~~i~ 20 (67)
.-.|..|+.++.
T Consensus 8 iL~CP~ck~~L~ 19 (69)
T 2pk7_A 8 ILACPICKGPLK 19 (69)
T ss_dssp TCCCTTTCCCCE
T ss_pred heeCCCCCCcCe
Confidence 456777776654
No 166
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=33.64 E-value=22 Score=12.95 Aligned_cols=15 Identities=20% Similarity=0.527 Sum_probs=10.9
Q ss_pred cccccccccccCCCC
Q psy10221 36 CLRCCICQLVLDRHP 50 (67)
Q Consensus 36 cf~C~~C~~~l~~~~ 50 (67)
-|.|..|++.+....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 12 PFKCVECGKGFSRRS 26 (46)
T ss_dssp SBCCSSSCCCBSSTT
T ss_pred CcccCccCcccCCHH
Confidence 378888988876543
No 167
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.53 E-value=19 Score=13.19 Aligned_cols=13 Identities=15% Similarity=0.513 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eon_A 12 PYKCQVCGKAFRV 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred ccCCCCCCcccCc
Confidence 3788888887654
No 168
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.43 E-value=18 Score=13.19 Aligned_cols=13 Identities=15% Similarity=0.460 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 12 PYQCNECGKAFSQ 24 (46)
T ss_dssp SSSCCSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 3788889887654
No 169
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=33.38 E-value=11 Score=14.67 Aligned_cols=13 Identities=23% Similarity=0.440 Sum_probs=10.1
Q ss_pred ccccccCccccCc
Q psy10221 10 RYCVACGESITDK 22 (67)
Q Consensus 10 ~~C~~C~~~i~~~ 22 (67)
-.|..|++.|...
T Consensus 10 ~~C~~C~~~i~~~ 22 (39)
T 2i5o_A 10 VPCEKCGSLVPVW 22 (39)
T ss_dssp EECTTTCCEEEGG
T ss_pred cccccccCcCCcc
Confidence 4699999988754
No 170
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=33.36 E-value=33 Score=17.23 Aligned_cols=16 Identities=19% Similarity=0.366 Sum_probs=8.9
Q ss_pred cccCCccccccCcccc
Q psy10221 5 IITELRYCVACGESIT 20 (67)
Q Consensus 5 ~~~~~~~C~~C~~~i~ 20 (67)
|...-..|..|+.+-.
T Consensus 99 yI~~yVlC~~C~sPdT 114 (139)
T 3cw2_K 99 FLKAYVECSTCKSLDT 114 (139)
T ss_dssp TSSCCSSCCSSSSSCC
T ss_pred HHHHeeECCCCCCcCc
Confidence 3444456777766543
No 171
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=33.15 E-value=14 Score=13.17 Aligned_cols=12 Identities=17% Similarity=0.454 Sum_probs=9.0
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2epc_A 12 YLCGQCGKSFTQ 23 (42)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCC
Confidence 678888887654
No 172
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.13 E-value=19 Score=13.13 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep1_A 12 PYECSDCGKSFIK 24 (46)
T ss_dssp SSCCSSSCCCCSS
T ss_pred CcCCCCCCchhCC
Confidence 3788889887654
No 173
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=33.11 E-value=28 Score=17.32 Aligned_cols=38 Identities=24% Similarity=0.479 Sum_probs=23.9
Q ss_pred ccccccCccccCceeeeecCceeccccc---------cccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL---------RCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf---------~C~~C~~~l~~ 48 (67)
..|..|...+.+. ++..=+..|+..|+ .|-.|..++..
T Consensus 79 ~~C~IC~~~~~~p-v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 79 FMCVCCQELVYQP-VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp TBCTTTSSBCSSE-EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CEeecCChhhcCC-EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 4688888877764 33344555666553 56677777654
No 174
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.53 E-value=20 Score=13.09 Aligned_cols=13 Identities=15% Similarity=0.631 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2en9_A 12 LFKCNECKKTFTQ 24 (46)
T ss_dssp CCBCTTTCCBCSS
T ss_pred CEECCccCcccCC
Confidence 3788888887654
No 175
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.28 E-value=19 Score=13.10 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2yti_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp TTCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 3788889887654
No 176
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.97 E-value=21 Score=12.94 Aligned_cols=13 Identities=15% Similarity=0.391 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eov_A 12 PYKCSDCGKSFTW 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CccCCccChhhCC
Confidence 3788889887754
No 177
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=31.94 E-value=15 Score=13.11 Aligned_cols=13 Identities=23% Similarity=0.605 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 10 ~~~C~~C~k~f~~ 22 (42)
T 2el5_A 10 PYECSECGKAFNR 22 (42)
T ss_dssp SEECSSSCCEESS
T ss_pred CccCCCcChhhCC
Confidence 3788888887654
No 178
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.91 E-value=21 Score=12.96 Aligned_cols=13 Identities=15% Similarity=0.225 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eop_A 12 PHECRECGKSFSF 24 (46)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeeCCCCCchhCC
Confidence 3788889887754
No 179
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=31.76 E-value=8.3 Score=13.23 Aligned_cols=10 Identities=20% Similarity=0.461 Sum_probs=6.9
Q ss_pred cccccccccc
Q psy10221 37 LRCCICQLVL 46 (67)
Q Consensus 37 f~C~~C~~~l 46 (67)
|-|..|+++.
T Consensus 6 ffcetcskpw 15 (26)
T 1loi_A 6 FFCETCSKPW 15 (26)
T ss_dssp HHHHTSSCTT
T ss_pred HHHHhcCCch
Confidence 4577777775
No 180
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.74 E-value=39 Score=14.95 Aligned_cols=40 Identities=23% Similarity=0.409 Sum_probs=23.6
Q ss_pred CCccccccCccccCce-eeeec-----Cceeccccc----------cccccccccC
Q psy10221 8 ELRYCVACGESITDKY-LLQVS-----DKSWHAQCL----------RCCICQLVLD 47 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~-~~~~~-----~~~~h~~cf----------~C~~C~~~l~ 47 (67)
....|.-|.....+.. ++..= ...+|..|+ .|-.|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 3567999987665322 23221 267888886 4556665553
No 181
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.72 E-value=21 Score=13.03 Aligned_cols=13 Identities=15% Similarity=0.585 Sum_probs=10.0
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2enh_A 12 PYECDVCRKAFSH 24 (46)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CcCCCCcCchhCC
Confidence 4788899887754
No 182
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.56 E-value=21 Score=13.03 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yth_A 12 PFQCEECGKRFTQ 24 (46)
T ss_dssp SBCCSSSCCCBSS
T ss_pred CCCCCCCCcccCC
Confidence 3788888887654
No 183
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.53 E-value=20 Score=13.07 Aligned_cols=13 Identities=15% Similarity=0.416 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 12 PYKCNECGKAFRA 24 (46)
T ss_dssp CCCCTTTTCCCSS
T ss_pred CeECCcCChhhCC
Confidence 3788888887654
No 184
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.50 E-value=15 Score=13.18 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2eof_A 12 PYECNECQKAFNT 24 (44)
T ss_dssp SEECTTTCCEESC
T ss_pred CeECCCCCcccCC
Confidence 3788888887654
No 185
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=31.32 E-value=23 Score=12.92 Aligned_cols=13 Identities=15% Similarity=0.406 Sum_probs=9.9
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2emk_A 12 PYECKECGKAFSQ 24 (46)
T ss_dssp SCBCSSSCCBCSC
T ss_pred ceECCCCCchhCC
Confidence 3788889887754
No 186
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.13 E-value=29 Score=15.85 Aligned_cols=38 Identities=21% Similarity=0.521 Sum_probs=21.6
Q ss_pred ccccccCccccCceeeeecCceeccccc-----------cccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL-----------RCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf-----------~C~~C~~~l~~ 48 (67)
..|..|...+.+. .+..=+..|+..|+ .|-.|..++..
T Consensus 22 ~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 22 LECPICLELIKEP-VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp TSCSSSCCCCSSC-CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCcccChhhcCe-EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 4688888777654 22333444554442 46666666654
No 187
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.12 E-value=22 Score=12.94 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2ytn_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeECCCCCCeeCC
Confidence 3788889887754
No 188
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=31.08 E-value=37 Score=15.95 Aligned_cols=14 Identities=29% Similarity=0.674 Sum_probs=9.8
Q ss_pred CCccccccCccccC
Q psy10221 8 ELRYCVACGESITD 21 (67)
Q Consensus 8 ~~~~C~~C~~~i~~ 21 (67)
....|+-|...+.+
T Consensus 36 ~~d~CaIC~~~~~~ 49 (106)
T 3dpl_R 36 VVDNCAICRNHIMD 49 (106)
T ss_dssp CSCCCSSSCSCTTS
T ss_pred CCCCCccCChhHhC
Confidence 45678888777764
No 189
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.07 E-value=21 Score=13.04 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoh_A 12 PYECKECRKTFIQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCcCchhCC
Confidence 3788888887654
No 190
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.05 E-value=16 Score=13.23 Aligned_cols=13 Identities=23% Similarity=0.582 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2emb_A 12 RYECSKCQATFNL 24 (44)
T ss_dssp SEECTTTCCEESC
T ss_pred CeECCCCCCccCC
Confidence 3788888887654
No 191
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.04 E-value=22 Score=12.95 Aligned_cols=13 Identities=23% Similarity=0.419 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2elz_A 12 PYKCEDCGKGYNR 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CeeCcccCchhCC
Confidence 3788889887754
No 192
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.03 E-value=22 Score=12.80 Aligned_cols=12 Identities=17% Similarity=0.490 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 11 ~~C~~C~k~f~~ 22 (43)
T 2yrm_A 11 FFCNECDCRFSE 22 (43)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCCCCCeeCC
Confidence 788888887654
No 193
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.95 E-value=15 Score=13.33 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=9.3
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (44)
T 2epv_A 12 PYECNECGKAFIW 24 (44)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCcccCc
Confidence 3688888887654
No 194
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.88 E-value=19 Score=14.66 Aligned_cols=10 Identities=10% Similarity=0.225 Sum_probs=5.3
Q ss_pred eCCeecchhh
Q psy10221 55 KDEAVYCKQD 64 (67)
Q Consensus 55 ~~~~~~C~~~ 64 (67)
+.++.+|..|
T Consensus 34 ~~~R~~C~kC 43 (50)
T 3j20_Y 34 HGDRWACGKC 43 (50)
T ss_dssp CSSEEECSSS
T ss_pred CCCeEECCCC
Confidence 4455566554
No 195
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=30.85 E-value=23 Score=18.98 Aligned_cols=10 Identities=30% Similarity=0.860 Sum_probs=4.4
Q ss_pred CccccccCcc
Q psy10221 9 LRYCVACGES 18 (67)
Q Consensus 9 ~~~C~~C~~~ 18 (67)
...|..|+.+
T Consensus 150 l~~C~~cg~~ 159 (244)
T 1u5k_A 150 TARCARCGAP 159 (244)
T ss_dssp CSBCTTTCCB
T ss_pred cCccccCCCC
Confidence 3344444443
No 196
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.79 E-value=21 Score=13.05 Aligned_cols=13 Identities=23% Similarity=0.427 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eom_A 12 GHRCSDCGKFFLQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCCCCeeCC
Confidence 4788889887654
No 197
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.78 E-value=16 Score=13.18 Aligned_cols=13 Identities=38% Similarity=0.938 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2eoj_A 12 PYECCECGKVFSR 24 (44)
T ss_dssp SCEETTTTEECSS
T ss_pred CeeCCCCCCccCC
Confidence 3788888887654
No 198
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.73 E-value=21 Score=12.86 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2eou_A 13 SECQECGKIFRH 24 (44)
T ss_dssp CCCTTTCCCCSS
T ss_pred eECCCCCcccCC
Confidence 788888887654
No 199
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=30.69 E-value=27 Score=15.27 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=16.1
Q ss_pred CccccccCccccCcee---eeecCceec
Q psy10221 9 LRYCVACGESITDKYL---LQVSDKSWH 33 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~---~~~~~~~~h 33 (67)
...|..|+..|+++.. +...++.++
T Consensus 3 ~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~ 30 (66)
T 1vq8_U 3 TRECDYCGTDIEPGTGTMFVHKDGATTH 30 (66)
T ss_dssp -CBCTTTCCBCCSSCCEEEECTTSCEEE
T ss_pred eeEecCcCCcccCCCceEEEeeCCcEEE
Confidence 4679999999986543 334455554
No 200
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.67 E-value=22 Score=12.96 Aligned_cols=13 Identities=23% Similarity=0.490 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 12 PFKCDICGKSFCG 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCcCCchhCC
Confidence 3788889887754
No 201
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.60 E-value=16 Score=13.02 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 11 ~~~C~~C~k~f~~ 23 (42)
T 2en2_A 11 PYKCETCGARFVQ 23 (42)
T ss_dssp SEECTTTCCEESS
T ss_pred CEeCCCcChhhCC
Confidence 3788888887654
No 202
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.10 E-value=16 Score=13.17 Aligned_cols=12 Identities=25% Similarity=0.869 Sum_probs=9.4
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2yu5_A 13 FKCSKCDRVFTQ 24 (44)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 788888887754
No 203
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.08 E-value=44 Score=15.59 Aligned_cols=39 Identities=18% Similarity=0.437 Sum_probs=22.6
Q ss_pred CccccccCccccCceeeeecCceeccccc------cccccccccC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCL------RCCICQLVLD 47 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf------~C~~C~~~l~ 47 (67)
...|..|...+.+...+..=+..|...|+ .|-.|..++.
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 35688888777664222244555555553 4666766653
No 204
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.99 E-value=24 Score=12.78 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=9.4
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq4_A 13 YNCKECGKSFSR 24 (46)
T ss_dssp CCBTTTTBCCSC
T ss_pred eECCCCCCccCc
Confidence 788889887754
No 205
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=29.89 E-value=23 Score=12.90 Aligned_cols=13 Identities=15% Similarity=0.700 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2em0_A 12 TWKCRECDMCFSQ 24 (46)
T ss_dssp CCCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 3788889887654
No 206
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.84 E-value=23 Score=12.84 Aligned_cols=13 Identities=15% Similarity=0.340 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (47)
T 2epx_A 12 PYECIECGKAFIQ 24 (47)
T ss_dssp SBCCSSSCCCBSS
T ss_pred CEECCccCchhCC
Confidence 3788888887654
No 207
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.77 E-value=25 Score=12.79 Aligned_cols=13 Identities=15% Similarity=0.401 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytq_A 12 PYGCSECGKAFSS 24 (46)
T ss_dssp SCBCSSSCCBCSC
T ss_pred CcCCCccChhhCC
Confidence 3788888887754
No 208
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.54 E-value=17 Score=13.26 Aligned_cols=13 Identities=23% Similarity=0.626 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 12 PFECSECQKAFNT 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCcccCC
Confidence 3788888887654
No 209
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.43 E-value=24 Score=12.83 Aligned_cols=13 Identities=15% Similarity=0.409 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2epz_A 12 PFDCIDCGKAFSD 24 (46)
T ss_dssp SBCCTTTCCCBSS
T ss_pred CeECCCCCceeCC
Confidence 3788888887654
No 210
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.25 E-value=17 Score=13.31 Aligned_cols=13 Identities=23% Similarity=0.409 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 12 PYGCNECGKNFGR 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CEEccccCcccCC
Confidence 3788889887754
No 211
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.13 E-value=17 Score=13.22 Aligned_cols=13 Identities=15% Similarity=0.222 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yts_A 12 PYICNECGKSFIQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CEECCCCChhhCC
Confidence 3788888887654
No 212
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.12 E-value=17 Score=13.26 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep3_A 12 PYRCAECGKAFTD 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCchhCC
Confidence 3788888887654
No 213
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=29.11 E-value=33 Score=14.88 Aligned_cols=16 Identities=19% Similarity=0.546 Sum_probs=9.9
Q ss_pred ccccccCCccccccCc
Q psy10221 2 FKTIITELRYCVACGE 17 (67)
Q Consensus 2 ~~~~~~~~~~C~~C~~ 17 (67)
+..+......|..|++
T Consensus 8 ~~~~~~~~~~C~~C~~ 23 (70)
T 2d8q_A 8 LEAVAPERPRCAYCSA 23 (70)
T ss_dssp CCCCCCCCCBCSSSCC
T ss_pred HHhccCCCCcCCCCCC
Confidence 4445555667777765
No 214
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.08 E-value=24 Score=12.87 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emz_A 12 PFKCNECGKGFGR 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 3788888887654
No 215
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=28.85 E-value=23 Score=13.32 Aligned_cols=27 Identities=22% Similarity=0.593 Sum_probs=14.4
Q ss_pred cccccCccccCceeeeecCceeccccccccccc
Q psy10221 11 YCVACGESITDKYLLQVSDKSWHAQCLRCCICQ 43 (67)
Q Consensus 11 ~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~ 43 (67)
.|..|+.+-.. +...++.+.. +|..|+
T Consensus 2 lC~~C~~peT~---l~~~~~~~~l---~C~aCG 28 (36)
T 1k81_A 2 ICRECGKPDTK---IIKEGRVHLL---KCMACG 28 (36)
T ss_dssp CCSSSCSCEEE---EEEETTEEEE---EEETTT
T ss_pred CCcCCCCCCcE---EEEeCCcEEE---EhhcCC
Confidence 47778766443 2224555654 444554
No 216
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=28.79 E-value=52 Score=15.40 Aligned_cols=13 Identities=31% Similarity=0.963 Sum_probs=9.9
Q ss_pred CCccccccCcccc
Q psy10221 8 ELRYCVACGESIT 20 (67)
Q Consensus 8 ~~~~C~~C~~~i~ 20 (67)
...+|..|+..|.
T Consensus 15 ~~qiCqiCGD~VG 27 (93)
T 1weo_A 15 DGQFCEICGDQIG 27 (93)
T ss_dssp SSCBCSSSCCBCC
T ss_pred CCCccccccCccc
Confidence 4578888888875
No 217
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.79 E-value=18 Score=13.06 Aligned_cols=12 Identities=17% Similarity=0.695 Sum_probs=9.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 11 ~~C~~C~k~f~~ 22 (44)
T 2emx_A 11 FGCSCCEKAFSS 22 (44)
T ss_dssp EECSSSSCEESS
T ss_pred ccCCCCCcccCC
Confidence 788888887754
No 218
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.76 E-value=42 Score=15.12 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=10.6
Q ss_pred ccCCccccccCcccc
Q psy10221 6 ITELRYCVACGESIT 20 (67)
Q Consensus 6 ~~~~~~C~~C~~~i~ 20 (67)
..+...|..|.+++.
T Consensus 22 ~~~~r~CarC~~~LG 36 (76)
T 2csz_A 22 HYSDRTCARCQESLG 36 (76)
T ss_dssp TCCCCBCSSSCCBCS
T ss_pred CCCccchhhhCcccc
Confidence 345567888888775
No 219
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.72 E-value=18 Score=12.79 Aligned_cols=12 Identities=17% Similarity=0.484 Sum_probs=8.8
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 11 ~~C~~C~k~f~~ 22 (41)
T 2ept_A 11 YECQECGKSFRQ 22 (41)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCCcCC
Confidence 678888877654
No 220
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.64 E-value=24 Score=12.78 Aligned_cols=13 Identities=15% Similarity=0.490 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 12 PYKCNECGKAFSQ 24 (46)
T ss_dssp TTCCTTTCCCCSS
T ss_pred CcCCCCCCCccCC
Confidence 3788888887654
No 221
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=28.63 E-value=17 Score=13.71 Aligned_cols=11 Identities=27% Similarity=0.564 Sum_probs=7.8
Q ss_pred ccccccccccC
Q psy10221 37 LRCCICQLVLD 47 (67)
Q Consensus 37 f~C~~C~~~l~ 47 (67)
|.|..|++.+.
T Consensus 8 ~~C~~C~k~F~ 18 (48)
T 3iuf_A 8 YACDICGKRYK 18 (48)
T ss_dssp EECTTTCCEES
T ss_pred EECCCcCcccC
Confidence 67788887654
No 222
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.61 E-value=18 Score=13.26 Aligned_cols=12 Identities=17% Similarity=0.658 Sum_probs=9.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoy_A 13 FKCNKCEKTFSC 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECcCCCCcCCC
Confidence 788888887654
No 223
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.35 E-value=18 Score=13.19 Aligned_cols=12 Identities=17% Similarity=0.598 Sum_probs=9.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2en3_A 13 FQCKECGMNFSW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCcccChhhCC
Confidence 788888887754
No 224
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.31 E-value=18 Score=13.16 Aligned_cols=12 Identities=17% Similarity=0.537 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eow_A 13 YKCNECGKAFRA 24 (46)
T ss_dssp EECTTSCCEESS
T ss_pred eeccccCChhcC
Confidence 788888887654
No 225
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=28.22 E-value=46 Score=21.41 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=21.1
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLV 45 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~ 45 (67)
+..+|..|+.-|-+--.+...++.| +|..|+..
T Consensus 97 ~pvRC~rCrayiNPf~~f~~~g~~w-----~Cn~C~~~ 129 (770)
T 3efo_B 97 GPVRCNRCKAYMCPFMQFIEGGRRY-----QCGFCNCV 129 (770)
T ss_dssp CSCBCTTTCCBSCTTCEEEGGGTEE-----ECTTTCCE
T ss_pred CCCccCCCCCCcCCceEEecCCCEE-----Eecccccc
Confidence 4568999988777643344455666 56666554
No 226
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.15 E-value=18 Score=13.18 Aligned_cols=13 Identities=15% Similarity=0.572 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2em3_A 12 PYECKVCSKAFTQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCcccCC
Confidence 3788888887654
No 227
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.12 E-value=50 Score=15.10 Aligned_cols=29 Identities=31% Similarity=0.588 Sum_probs=17.2
Q ss_pred ccccccCccccCceeeee--cCceecccccc
Q psy10221 10 RYCVACGESITDKYLLQV--SDKSWHAQCLR 38 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~--~~~~~h~~cf~ 38 (67)
..|..|+..-.+..++.- =...||..|..
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~ 47 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCLL 47 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSSS
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccCC
Confidence 468888876543333332 24568888764
No 228
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.05 E-value=39 Score=13.72 Aligned_cols=29 Identities=28% Similarity=0.659 Sum_probs=17.6
Q ss_pred cCCccccccCccccCceeee--ecCceecccccc
Q psy10221 7 TELRYCVACGESITDKYLLQ--VSDKSWHAQCLR 38 (67)
Q Consensus 7 ~~~~~C~~C~~~i~~~~~~~--~~~~~~h~~cf~ 38 (67)
.....|..|++. ..++. .=.+.||..|..
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ 37 (56)
T 2yql_A 7 GHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLD 37 (56)
T ss_dssp SSCCSCSSSCCS---SCCEECSSSSCEECSSSSS
T ss_pred CCCCCCccCCCC---CeEEEcCCCCcceECccCC
Confidence 345678888864 22332 235678988864
No 229
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.94 E-value=26 Score=12.78 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 12 PYKCMECGKAFGD 24 (46)
T ss_dssp SSSBTTTTBCCSS
T ss_pred CcCCCCCCchhCC
Confidence 3788889887754
No 230
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.84 E-value=23 Score=13.93 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=8.9
Q ss_pred CccccccCccccCc
Q psy10221 9 LRYCVACGESITDK 22 (67)
Q Consensus 9 ~~~C~~C~~~i~~~ 22 (67)
...|..|...+.+.
T Consensus 15 ~~~C~IC~~~~~~p 28 (58)
T 2ecj_A 15 EASCSVCLEYLKEP 28 (58)
T ss_dssp CCBCSSSCCBCSSC
T ss_pred CCCCccCCcccCcc
Confidence 34677777766654
No 231
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.77 E-value=19 Score=13.10 Aligned_cols=13 Identities=23% Similarity=0.516 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 12 PYRCGECGKAFAQ 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CeECCCCCCccCC
Confidence 3788888887654
No 232
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.71 E-value=26 Score=13.46 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=21.1
Q ss_pred CccccccCccccCceeeeecCceec--cccccccccccccC
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWH--AQCLRCCICQLVLD 47 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h--~~cf~C~~C~~~l~ 47 (67)
.-.|..|++.......+..=-+..| ..-|.|..|++.+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence 3468888887764322211000022 23478889988664
No 233
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.68 E-value=19 Score=13.13 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emi_A 13 YECSECGKAFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred CCCCCCCcccCC
Confidence 788888887654
No 234
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.53 E-value=19 Score=13.12 Aligned_cols=12 Identities=17% Similarity=0.742 Sum_probs=9.2
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eml_A 13 YECSVCGKAFSH 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCcCCccCC
Confidence 788888887654
No 235
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=27.52 E-value=23 Score=17.54 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=18.7
Q ss_pred CCccccccCccccCceeeeecCceecc--cccccccccccc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHA--QCLRCCICQLVL 46 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~--~cf~C~~C~~~l 46 (67)
+.-.|..|++.+... .......|| .-..|..|....
T Consensus 7 ~~~~Ct~Cg~~~~~~---~~~~~~~HPll~v~~C~~C~~~y 44 (129)
T 3ql9_A 7 GIVSCTACGQQVNHF---QKDSIYRHPSLQVLICKNCFKYY 44 (129)
T ss_dssp CSCBCTTTCCBCCCC---BTTTEEECTTTCCEEEHHHHHHH
T ss_pred CceEeccCCCCCccc---CCCccccCCCcCceeCHhHHhhh
Confidence 345788888887421 111122343 245666676644
No 236
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=27.45 E-value=48 Score=21.31 Aligned_cols=33 Identities=15% Similarity=0.505 Sum_probs=20.9
Q ss_pred CCccccccCccccCceeeeecCceeccccccccccccc
Q psy10221 8 ELRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLV 45 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~ 45 (67)
+..+|..|+.-|-+--.+...++.| +|..|+..
T Consensus 93 ~pvRC~rCrayiNPf~~f~~~g~~w-----~Cn~C~~~ 125 (766)
T 3eh2_A 93 GPLRCNRCKAYMCPFMQFIEGGRRF-----QCCFCSCI 125 (766)
T ss_dssp CCCBCTTTCCBCCTTCEEEGGGTEE-----ECTTTCCE
T ss_pred CCCccCCCCCEeCCceEEecCCCEE-----Eecccccc
Confidence 4578999988776643344455666 56666554
No 237
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.43 E-value=19 Score=13.10 Aligned_cols=13 Identities=15% Similarity=0.266 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eor_A 12 PYNCEECGKAFIH 24 (46)
T ss_dssp SEECTTTCCEESS
T ss_pred CccCCCCCCCcCC
Confidence 3788888887654
No 238
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.37 E-value=20 Score=13.05 Aligned_cols=13 Identities=15% Similarity=0.363 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq3_A 12 PYECNQCGKAFSV 24 (46)
T ss_dssp SSEETTTTEECSS
T ss_pred CeECCCCChhhCC
Confidence 3788888887654
No 239
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=27.18 E-value=50 Score=14.67 Aligned_cols=10 Identities=20% Similarity=0.358 Sum_probs=5.4
Q ss_pred ccCccccCce
Q psy10221 14 ACGESITDKY 23 (67)
Q Consensus 14 ~C~~~i~~~~ 23 (67)
.|+..+...+
T Consensus 6 ~Cg~vf~~ge 15 (75)
T 3ny3_A 6 LCGRVFKVGE 15 (75)
T ss_dssp CCCCBCCTTC
T ss_pred ccCCcccCCC
Confidence 4666665443
No 240
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.18 E-value=20 Score=13.05 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=9.5
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2epw_A 13 CKCTECGKAFCW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCCccCC
Confidence 788889887765
No 241
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.12 E-value=20 Score=13.03 Aligned_cols=13 Identities=15% Similarity=0.168 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em7_A 12 PYKCEECGKGFIC 24 (46)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCccchhCC
Confidence 3788888887654
No 242
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=27.10 E-value=20 Score=13.12 Aligned_cols=13 Identities=15% Similarity=0.536 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2el6_A 12 PYKCSQCEKSFSG 24 (46)
T ss_dssp SEECSSSSCEESS
T ss_pred CeECCCCCcccCC
Confidence 3788889887754
No 243
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.94 E-value=20 Score=13.09 Aligned_cols=13 Identities=15% Similarity=0.483 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2emh_A 12 PYICTVCGKAFTD 24 (46)
T ss_dssp SEECTTTCCEESS
T ss_pred CcCCCCCCchhCC
Confidence 3788888887754
No 244
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.79 E-value=20 Score=13.09 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yto_A 12 PYKCSDCGKAFTR 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CEECcccCCccCC
Confidence 3788888887654
No 245
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.69 E-value=20 Score=13.05 Aligned_cols=13 Identities=15% Similarity=0.306 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 12 PYICAECGKAFTI 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCChhhCC
Confidence 3788888887654
No 246
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=26.60 E-value=20 Score=12.99 Aligned_cols=12 Identities=17% Similarity=0.506 Sum_probs=9.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2el4_A 13 YGCSQCAKTFSL 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 788888887654
No 247
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=26.58 E-value=20 Score=13.07 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2emj_A 12 PFECAECGKSFSI 24 (46)
T ss_dssp SEECSSSSCEESS
T ss_pred CEECCCCCcccCC
Confidence 3788888887654
No 248
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.53 E-value=20 Score=13.03 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2emy_A 12 PYECHECGKAFSR 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CcCCCCCCcccCc
Confidence 3788888887654
No 249
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.50 E-value=28 Score=12.64 Aligned_cols=13 Identities=15% Similarity=0.416 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytt_A 12 PYQCSECGKSFSG 24 (46)
T ss_dssp TTCCSSSCCCCSS
T ss_pred CeeCCCCCcccCC
Confidence 3788888887654
No 250
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.50 E-value=21 Score=13.03 Aligned_cols=13 Identities=23% Similarity=0.641 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 12 PYECSICGKSFTK 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCcccCC
Confidence 3788888887654
No 251
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.40 E-value=21 Score=13.06 Aligned_cols=13 Identities=15% Similarity=0.406 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em4_A 12 PYECIECGKAFKT 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCCccCC
Confidence 3788888887654
No 252
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.38 E-value=21 Score=13.02 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.8
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yu8_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCcCCchhCC
Confidence 3788889887754
No 253
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=26.34 E-value=18 Score=14.78 Aligned_cols=12 Identities=25% Similarity=0.542 Sum_probs=7.5
Q ss_pred ccccccCccccC
Q psy10221 10 RYCVACGESITD 21 (67)
Q Consensus 10 ~~C~~C~~~i~~ 21 (67)
..|..|+++|..
T Consensus 19 ~~C~~CG~~i~~ 30 (49)
T 2l8e_A 19 LKCEYCGKYAPA 30 (49)
T ss_dssp EECTTTCCEEEG
T ss_pred CcChhccCcccc
Confidence 457777766654
No 254
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.31 E-value=21 Score=13.05 Aligned_cols=12 Identities=25% Similarity=0.672 Sum_probs=8.9
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytp_A 13 YECSECGKAFAR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCcccCC
Confidence 778888887654
No 255
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.18 E-value=22 Score=12.99 Aligned_cols=12 Identities=25% Similarity=0.719 Sum_probs=9.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emf_A 13 FECTECGKAFTR 24 (46)
T ss_dssp EECSSSCCEESC
T ss_pred eECCCCCchhCC
Confidence 788888887654
No 256
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=26.06 E-value=40 Score=15.28 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=22.6
Q ss_pred ccccccCccccCceeeeecCceecccc---------ccccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQC---------LRCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~c---------f~C~~C~~~l~~ 48 (67)
..|..|...+.+...+..=+..|+..| ..|-.|..++..
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 468888887765422133355565555 356667766643
No 257
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.01 E-value=18 Score=13.08 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (44)
T 2eox_A 12 SYNCNECGKAFTR 24 (44)
T ss_dssp CEEETTTTEEESS
T ss_pred CeECcccCcccCC
Confidence 3788888887654
No 258
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.93 E-value=21 Score=13.00 Aligned_cols=13 Identities=31% Similarity=0.649 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eq0_A 12 PYKCHECGKVFRR 24 (46)
T ss_dssp CEECTTTCCEESS
T ss_pred CeECCCCCchhCC
Confidence 3788888887654
No 259
>3h4n_A Cytochrome C7, cytochrome C3; multiheme cytochrome, geobacter sulfurreducen electron transport; HET: HEM; 1.35A {Geobacter sulfurreducens} SCOP: a.138.1.1
Probab=25.85 E-value=4.1 Score=17.90 Aligned_cols=11 Identities=36% Similarity=0.688 Sum_probs=6.7
Q ss_pred cccccCccccC
Q psy10221 11 YCVACGESITD 21 (67)
Q Consensus 11 ~C~~C~~~i~~ 21 (67)
.|..|...+.+
T Consensus 27 ~C~~CH~~~~~ 37 (72)
T 3h4n_A 27 ECKACHETEAG 37 (72)
T ss_dssp GGGGTSSSTTC
T ss_pred ChhhhcCCCcC
Confidence 46666666553
No 260
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.75 E-value=22 Score=12.91 Aligned_cols=13 Identities=15% Similarity=0.289 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emp_A 12 PYMCNECGKAFSV 24 (46)
T ss_dssp SEECSSSCCEESC
T ss_pred CeECCCCCchhCC
Confidence 3788888887654
No 261
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.59 E-value=22 Score=12.98 Aligned_cols=13 Identities=15% Similarity=0.496 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em2_A 12 PFKCKECGKAFRQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CEECCcCCchhCC
Confidence 3788888887654
No 262
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.59 E-value=22 Score=12.98 Aligned_cols=13 Identities=15% Similarity=0.309 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em5_A 12 SHQCHECGRGFTL 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCcCCCccCC
Confidence 3788888887654
No 263
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.58 E-value=21 Score=12.97 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yso_A 12 SHQCRECGEIFFQ 24 (46)
T ss_dssp CEECTTTCCEESS
T ss_pred CEEccccChhhCC
Confidence 3788888887754
No 264
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.50 E-value=22 Score=12.90 Aligned_cols=13 Identities=15% Similarity=0.281 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eme_A 12 PYVCDYCGKAFGL 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCChhhCC
Confidence 3788888887654
No 265
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.25 E-value=23 Score=12.86 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eoe_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SSEETTTTEECSS
T ss_pred CeECCCcChhhCC
Confidence 3788888887654
No 266
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.23 E-value=22 Score=12.91 Aligned_cols=13 Identities=15% Similarity=0.296 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2enc_A 12 PFKCEECGKGFYT 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCCcCCC
Confidence 3788888887654
No 267
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.11 E-value=23 Score=12.86 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emm_A 12 PHKCNECGKSFIQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeeCCCCChhhCC
Confidence 3788888887654
No 268
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=25.03 E-value=31 Score=15.32 Aligned_cols=11 Identities=45% Similarity=1.084 Sum_probs=6.5
Q ss_pred cccccCccccC
Q psy10221 11 YCVACGESITD 21 (67)
Q Consensus 11 ~C~~C~~~i~~ 21 (67)
.|..|++.+..
T Consensus 30 ~C~~Cgk~F~~ 40 (85)
T 2lv2_A 30 LCPVCGESFAS 40 (85)
T ss_dssp ECTTSCCEESS
T ss_pred ECCCCCCCcCc
Confidence 46666666653
No 269
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.03 E-value=22 Score=12.87 Aligned_cols=12 Identities=17% Similarity=0.188 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en8_A 13 HTCDECGKNFCY 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCcCcccCC
Confidence 788888887654
No 270
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.00 E-value=22 Score=12.91 Aligned_cols=13 Identities=15% Similarity=0.501 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 12 PFKCGECGKSYNQ 24 (46)
T ss_dssp SEECTTTCCEESS
T ss_pred CeECCCCCcccCC
Confidence 3788888887654
No 271
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=24.86 E-value=32 Score=14.35 Aligned_cols=12 Identities=33% Similarity=0.711 Sum_probs=8.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
..|..|+.-+..
T Consensus 31 ~vC~~CGlVl~e 42 (58)
T 1dl6_A 31 MICPECGLVVGD 42 (58)
T ss_dssp EECTTTCCEECC
T ss_pred EEeCCCCCEEec
Confidence 567777777654
No 272
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.79 E-value=23 Score=12.87 Aligned_cols=13 Identities=23% Similarity=0.531 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ene_A 12 PYKCNECGKVFRH 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCchhCC
Confidence 3788888887654
No 273
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=24.78 E-value=46 Score=13.42 Aligned_cols=11 Identities=27% Similarity=0.776 Sum_probs=7.5
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
..|..|++.|.
T Consensus 15 t~C~~C~k~i~ 25 (49)
T 1kbe_A 15 QVCNVCQKSMI 25 (49)
T ss_dssp CCCSSSCCSSC
T ss_pred cCccccCceeE
Confidence 56777777664
No 274
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.59 E-value=23 Score=12.89 Aligned_cols=13 Identities=23% Similarity=0.480 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em8_A 12 PYKCVECGKGYKR 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECcccCchhCC
Confidence 3788888887654
No 275
>3e2u_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskelet associated protein, P150glued; 2.60A {Homo sapiens}
Probab=24.57 E-value=18 Score=14.41 Aligned_cols=10 Identities=30% Similarity=0.607 Sum_probs=5.9
Q ss_pred eCCeecchhh
Q psy10221 55 KDEAVYCKQD 64 (67)
Q Consensus 55 ~~~~~~C~~~ 64 (67)
.+.++||+.|
T Consensus 17 ~~eRpYCe~C 26 (42)
T 3e2u_E 17 GEERPYCEIC 26 (42)
T ss_dssp ---CCEETTT
T ss_pred cccCcccccc
Confidence 3457899887
No 276
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.55 E-value=19 Score=13.06 Aligned_cols=13 Identities=15% Similarity=0.427 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~F~~ 24 (45)
T 2epu_A 12 PFECTHCGKSFRA 24 (45)
T ss_dssp SEEETTTTEEESS
T ss_pred CccCCCCCCccCC
Confidence 3788888887654
No 277
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.43 E-value=24 Score=12.84 Aligned_cols=13 Identities=23% Similarity=0.618 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 12 PYKCSECGKAFHR 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCCeeCC
Confidence 3788888887654
No 278
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=24.34 E-value=45 Score=13.13 Aligned_cols=9 Identities=11% Similarity=0.327 Sum_probs=4.7
Q ss_pred CCeecchhh
Q psy10221 56 DEAVYCKQD 64 (67)
Q Consensus 56 ~~~~~C~~~ 64 (67)
+|..+|..|
T Consensus 20 ~G~~LCNaC 28 (43)
T 2vut_I 20 EGQPLCNAC 28 (43)
T ss_dssp TSCEECHHH
T ss_pred CCCcccHHH
Confidence 344556555
No 279
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.33 E-value=24 Score=12.83 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CEeCCcCCCccCC
Confidence 3788888887654
No 280
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=24.33 E-value=35 Score=12.95 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=8.6
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 5 ~~C~~C~~~f~~ 16 (57)
T 3uk3_C 5 RECSYCGKFFRS 16 (57)
T ss_dssp CBCTTTCCBCSC
T ss_pred ccCCCCcchhCC
Confidence 677888877654
No 281
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.25 E-value=20 Score=13.12 Aligned_cols=13 Identities=15% Similarity=0.383 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoz_A 12 PYSCNVCGKAFVL 24 (46)
T ss_dssp SEEETTTTEEESS
T ss_pred CeECcccChhhCC
Confidence 3788888887654
No 282
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=24.05 E-value=24 Score=12.80 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ema_A 12 RYKCNECGKVFSR 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CcCCCCCcchhCC
Confidence 3788888887654
No 283
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.88 E-value=43 Score=13.48 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=6.2
Q ss_pred ccccccCccccC
Q psy10221 10 RYCVACGESITD 21 (67)
Q Consensus 10 ~~C~~C~~~i~~ 21 (67)
..|..|...+.+
T Consensus 21 ~~C~IC~~~~~~ 32 (63)
T 2ysj_A 21 VICPICLDILQK 32 (63)
T ss_dssp CBCTTTCSBCSS
T ss_pred CCCCcCCchhCC
Confidence 345555555544
No 284
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=23.79 E-value=25 Score=12.73 Aligned_cols=13 Identities=15% Similarity=0.276 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em9_A 12 PYNCKECGKSFRW 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCccccccCC
Confidence 3788888887654
No 285
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=23.78 E-value=53 Score=15.16 Aligned_cols=26 Identities=15% Similarity=0.368 Sum_probs=14.0
Q ss_pred ccccccCccccCceeeeecCceecccc
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQC 36 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~c 36 (67)
..|..|...+.+. +...=+..|+..|
T Consensus 16 ~~C~iC~~~~~~p-~~~~CgH~fC~~C 41 (115)
T 3l11_A 16 CQCGICMEILVEP-VTLPCNHTLCKPC 41 (115)
T ss_dssp HBCTTTCSBCSSC-EECTTSCEECHHH
T ss_pred CCCccCCcccCce-eEcCCCCHHhHHH
Confidence 4588888777654 2223344444443
No 286
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=23.55 E-value=54 Score=13.80 Aligned_cols=27 Identities=22% Similarity=0.580 Sum_probs=16.3
Q ss_pred CccccccCccccCceeeee-cCceecccc
Q psy10221 9 LRYCVACGESITDKYLLQV-SDKSWHAQC 36 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~-~~~~~h~~c 36 (67)
...|..|...+.+. ++.. =+..|+..|
T Consensus 15 ~~~C~IC~~~~~~p-~~~~~CgH~fC~~C 42 (74)
T 2yur_A 15 ELLCLICKDIMTDA-VVIPCCGNSYCDEC 42 (74)
T ss_dssp GGSCSSSCCCCTTC-EECSSSCCEECTTH
T ss_pred CCCCcCCChHHhCC-eEcCCCCCHHHHHH
Confidence 35788888877765 3333 355565555
No 287
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=23.44 E-value=70 Score=20.76 Aligned_cols=32 Identities=22% Similarity=0.636 Sum_probs=19.4
Q ss_pred CccccccCccccCceeeeecCceeccccccccccccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLV 45 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~ 45 (67)
..+|..|+.-|-+--.+...++.| .|..|+..
T Consensus 112 pvRC~~CrayiNPf~~~~~~g~~W-----~C~~C~~~ 143 (810)
T 1pcx_A 112 IVRCRRCRSYMNPFVTFIEQGRRW-----RCNFCRLA 143 (810)
T ss_dssp CCBCTTTCCBCCTTCEEETTTTEE-----ECTTTCCE
T ss_pred CCccCCccCEecCceEEeCCCCEE-----EccCCCCc
Confidence 567888887666532344445555 66666654
No 288
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=23.27 E-value=46 Score=12.89 Aligned_cols=14 Identities=21% Similarity=0.624 Sum_probs=9.2
Q ss_pred CCccccccCccccC
Q psy10221 8 ELRYCVACGESITD 21 (67)
Q Consensus 8 ~~~~C~~C~~~i~~ 21 (67)
....|..|++.|..
T Consensus 10 ~pt~C~~C~~~l~g 23 (50)
T 1ptq_A 10 SPTFCDHCGSLLWG 23 (50)
T ss_dssp SCCBCTTTCCBCCS
T ss_pred CCCCcCCCCceeec
Confidence 44667788777753
No 289
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=23.13 E-value=25 Score=13.47 Aligned_cols=13 Identities=31% Similarity=0.613 Sum_probs=9.7
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 24 ~~~C~~C~k~f~~ 36 (54)
T 1yui_A 24 PATCPICYAVIRQ 36 (54)
T ss_dssp CEECTTTCCEESS
T ss_pred CccCCCCCcccCC
Confidence 4788889887654
No 290
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=23.08 E-value=46 Score=14.02 Aligned_cols=12 Identities=42% Similarity=0.960 Sum_probs=8.5
Q ss_pred CccccccCcccc
Q psy10221 9 LRYCVACGESIT 20 (67)
Q Consensus 9 ~~~C~~C~~~i~ 20 (67)
...|..|++.|.
T Consensus 19 ~~~C~~Cg~~i~ 30 (61)
T 4b6d_A 19 PESCVPCGKRIK 30 (61)
T ss_dssp CEECTTTCCEEC
T ss_pred CcccccccCEEE
Confidence 467888877763
No 291
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.06 E-value=27 Score=12.59 Aligned_cols=12 Identities=33% Similarity=0.860 Sum_probs=9.1
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++.+..
T Consensus 11 ~~C~~C~k~f~~ 22 (45)
T 2epq_A 11 YSCPVCGLRFKR 22 (45)
T ss_dssp SEETTTTEECSC
T ss_pred CcCCCCCcccCC
Confidence 678888887654
No 292
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=23.03 E-value=68 Score=15.13 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=22.9
Q ss_pred CccccccCcccc-C---ceeeeecCceec---cccccccccccccCC
Q psy10221 9 LRYCVACGESIT-D---KYLLQVSDKSWH---AQCLRCCICQLVLDR 48 (67)
Q Consensus 9 ~~~C~~C~~~i~-~---~~~~~~~~~~~h---~~cf~C~~C~~~l~~ 48 (67)
...|..|+.... . ...+...+.... .....|..|+..+.+
T Consensus 2 ~M~Cp~Cg~~~~~~~~~~~~~~~kg~~~~v~~v~~~~C~~CGE~~~d 48 (133)
T 3o9x_A 2 HMKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMN 48 (133)
T ss_dssp CCBCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEECC
T ss_pred CcCCCcCCCCceeeceEEEEEEECCEEEEECCCceeECCCCCCEeec
Confidence 357899987632 1 112334454432 257888888876643
No 293
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=22.83 E-value=59 Score=14.02 Aligned_cols=11 Identities=18% Similarity=0.773 Sum_probs=7.6
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
..|..|++.+.
T Consensus 12 ~~C~~C~~~F~ 22 (73)
T 1vfy_A 12 DACMICSKKFS 22 (73)
T ss_dssp SBCTTTCCBCB
T ss_pred CcccCCCCccC
Confidence 46778877664
No 294
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=22.80 E-value=56 Score=14.18 Aligned_cols=9 Identities=33% Similarity=1.232 Sum_probs=3.7
Q ss_pred cccccCccc
Q psy10221 11 YCVACGESI 19 (67)
Q Consensus 11 ~C~~C~~~i 19 (67)
.|..|+..|
T Consensus 37 ~C~~C~~~l 45 (72)
T 2fnf_X 37 WCDLCGREV 45 (72)
T ss_dssp BCTTTSSBC
T ss_pred chhhhhHHH
Confidence 344444433
No 295
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.71 E-value=22 Score=12.93 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=9.2
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en1_A 13 FKCEECGKRFTQ 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eeCCCCCcccCC
Confidence 788888887654
No 296
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=22.59 E-value=58 Score=14.14 Aligned_cols=13 Identities=15% Similarity=0.557 Sum_probs=7.6
Q ss_pred CCccccccCcccc
Q psy10221 8 ELRYCVACGESIT 20 (67)
Q Consensus 8 ~~~~C~~C~~~i~ 20 (67)
....|..|++.+.
T Consensus 14 ~~~rC~~C~kkvg 26 (64)
T 1wfh_A 14 RPNRCTVCRKRVG 26 (64)
T ss_dssp SCCCCTTTCCCCC
T ss_pred cCCcChhhCCccC
Confidence 3456666666554
No 297
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.54 E-value=60 Score=13.93 Aligned_cols=40 Identities=30% Similarity=0.559 Sum_probs=23.1
Q ss_pred CCccccccCccccCce---eeeecCceecccc-----------ccccccccccC
Q psy10221 8 ELRYCVACGESITDKY---LLQVSDKSWHAQC-----------LRCCICQLVLD 47 (67)
Q Consensus 8 ~~~~C~~C~~~i~~~~---~~~~~~~~~h~~c-----------f~C~~C~~~l~ 47 (67)
....|..|...+.+.. .+..=+..|+..| ..|-.|...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3457888988877522 2223355566555 34566666554
No 298
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.05 E-value=64 Score=16.40 Aligned_cols=12 Identities=25% Similarity=0.780 Sum_probs=7.1
Q ss_pred cCCccccccCcc
Q psy10221 7 TELRYCVACGES 18 (67)
Q Consensus 7 ~~~~~C~~C~~~ 18 (67)
++-..|.-|+.+
T Consensus 27 p~N~~CaDCga~ 38 (149)
T 2crw_A 27 PTNKVCFDCGAK 38 (149)
T ss_dssp TTTSBCSSSCCB
T ss_pred cCCCcCCCCcCC
Confidence 345667777654
No 299
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.98 E-value=29 Score=12.85 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=17.5
Q ss_pred ccccccCccccCceeeeecCceec--ccccccccccc
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWH--AQCLRCCICQL 44 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h--~~cf~C~~C~~ 44 (67)
-.|..|++.......+.. -...| ..-|.|..|++
T Consensus 13 ~~C~~C~k~f~~~~~L~~-H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 13 VACEICGKIFRDVYHLNR-HKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp EEETTTTEEESSHHHHHH-HGGGSCSCCCCCSCCCCC
T ss_pred eeCCCCCcccCCHHHHHH-HHHhcCCCCCccCCCCCC
Confidence 468888887764322211 01112 22377887764
No 300
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=21.94 E-value=40 Score=12.76 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=7.3
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 2 ~~C~~C~~~f~~ 13 (57)
T 1bbo_A 2 YICEECGIRXKK 13 (57)
T ss_dssp CBCTTTCCBCSS
T ss_pred CcCCCCcCcCCC
Confidence 456677766543
No 301
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.86 E-value=24 Score=12.79 Aligned_cols=13 Identities=15% Similarity=0.337 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ysp_A 12 PYKCEKCGKGYNS 24 (46)
T ss_dssp SEEETTTTEEESC
T ss_pred CeECCCCCCccCC
Confidence 3788888887654
No 302
>2pzo_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskeleton associated protein, P150glued; 2.60A {Homo sapiens} PDB: 3e2u_E
Probab=21.81 E-value=21 Score=14.13 Aligned_cols=10 Identities=30% Similarity=0.607 Sum_probs=5.0
Q ss_pred eCCeecchhh
Q psy10221 55 KDEAVYCKQD 64 (67)
Q Consensus 55 ~~~~~~C~~~ 64 (67)
.+.++||..|
T Consensus 17 ~~eRpYCd~C 26 (42)
T 2pzo_E 17 GEERPYCEIC 26 (42)
T ss_dssp ----CEETTT
T ss_pred ccCCcccccc
Confidence 4567888877
No 303
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=21.70 E-value=41 Score=12.95 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=7.9
Q ss_pred ccccccccccCC
Q psy10221 37 LRCCICQLVLDR 48 (67)
Q Consensus 37 f~C~~C~~~l~~ 48 (67)
|.|..|++....
T Consensus 3 ~~C~~C~~~f~~ 14 (60)
T 2adr_A 3 FVCEVCTRAFAR 14 (60)
T ss_dssp BCCTTTCCCBSC
T ss_pred CcCCCCccccCC
Confidence 567777776643
No 304
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=21.58 E-value=47 Score=14.43 Aligned_cols=13 Identities=15% Similarity=0.588 Sum_probs=8.2
Q ss_pred CCccccccCcccc
Q psy10221 8 ELRYCVACGESIT 20 (67)
Q Consensus 8 ~~~~C~~C~~~i~ 20 (67)
....|..|++.+.
T Consensus 14 ~~~rC~~C~kkvg 26 (64)
T 1wg2_A 14 PNNRCFSCNKKVG 26 (64)
T ss_dssp CSCSCTTTCCCCT
T ss_pred cCCcChhhCCccc
Confidence 3456777776654
No 305
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.51 E-value=61 Score=16.24 Aligned_cols=11 Identities=27% Similarity=0.978 Sum_probs=6.1
Q ss_pred CCccccccCcc
Q psy10221 8 ELRYCVACGES 18 (67)
Q Consensus 8 ~~~~C~~C~~~ 18 (67)
+-..|.-|+.+
T Consensus 28 ~N~~CaDCga~ 38 (141)
T 2crr_A 28 DNKYCADCEAK 38 (141)
T ss_dssp GGSSCSSSCCS
T ss_pred cCCcCCCCCCC
Confidence 34566666644
No 306
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.40 E-value=69 Score=14.28 Aligned_cols=10 Identities=20% Similarity=0.667 Sum_probs=5.8
Q ss_pred cccccCcccc
Q psy10221 11 YCVACGESIT 20 (67)
Q Consensus 11 ~C~~C~~~i~ 20 (67)
.|..|++.+.
T Consensus 21 ~C~~C~k~f~ 30 (115)
T 2dmi_A 21 RCKDCSAAYD 30 (115)
T ss_dssp EBSSSSCEES
T ss_pred ECCccCchhc
Confidence 4666666554
No 307
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.39 E-value=24 Score=12.79 Aligned_cols=13 Identities=15% Similarity=0.393 Sum_probs=9.5
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++.+..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2en6_A 12 PYGCNECGKTFSQ 24 (46)
T ss_dssp CEEETTTTEEESS
T ss_pred CeECCCCCcccCc
Confidence 3788888887654
No 308
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=21.28 E-value=24 Score=16.39 Aligned_cols=31 Identities=23% Similarity=0.457 Sum_probs=17.1
Q ss_pred CccccccCccccCce-eeeecCceeccccccc
Q psy10221 9 LRYCVACGESITDKY-LLQVSDKSWHAQCLRC 39 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~-~~~~~~~~~h~~cf~C 39 (67)
-..|..|..--.+.. --+.=++.||..|++-
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHH
T ss_pred CcccCccccccccceeccccccccccHhhccc
Confidence 356777763332211 1234467788888764
No 309
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.16 E-value=30 Score=12.51 Aligned_cols=13 Identities=15% Similarity=0.526 Sum_probs=9.4
Q ss_pred cccccccccccCC
Q psy10221 36 CLRCCICQLVLDR 48 (67)
Q Consensus 36 cf~C~~C~~~l~~ 48 (67)
-|.|..|++....
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 12 PYKCDVCHKSFRY 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeeCcccCcccCC
Confidence 3788888887654
No 310
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=21.14 E-value=36 Score=10.83 Aligned_cols=12 Identities=25% Similarity=0.658 Sum_probs=7.0
Q ss_pred cccc--ccccccCC
Q psy10221 37 LRCC--ICQLVLDR 48 (67)
Q Consensus 37 f~C~--~C~~~l~~ 48 (67)
|.|. .|++....
T Consensus 3 ~~C~~~~C~k~f~~ 16 (31)
T 1sp2_A 3 FMCTWSYCGKRFTR 16 (31)
T ss_dssp CBCCSTTCCCBCSS
T ss_pred cCCcCCCCCcccCC
Confidence 4565 67766543
No 311
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.72 E-value=43 Score=13.85 Aligned_cols=10 Identities=30% Similarity=1.076 Sum_probs=5.5
Q ss_pred ccccccCccc
Q psy10221 10 RYCVACGESI 19 (67)
Q Consensus 10 ~~C~~C~~~i 19 (67)
..|..|+..|
T Consensus 23 t~C~~C~~~i 32 (59)
T 1rfh_A 23 GWCDLCGREV 32 (59)
T ss_dssp EECTTTCSEE
T ss_pred eEchhcchhh
Confidence 4566665555
No 312
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=20.63 E-value=27 Score=10.73 Aligned_cols=11 Identities=18% Similarity=0.513 Sum_probs=6.2
Q ss_pred cccc--ccccccC
Q psy10221 37 LRCC--ICQLVLD 47 (67)
Q Consensus 37 f~C~--~C~~~l~ 47 (67)
+.|. .|++...
T Consensus 3 ~~C~~~~C~k~f~ 15 (29)
T 2ab3_A 3 YVCHFENCGRSFN 15 (29)
T ss_dssp EEECSTTTCEEES
T ss_pred CCCcCCcCcCccC
Confidence 4566 6666543
No 313
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=20.57 E-value=40 Score=13.24 Aligned_cols=12 Identities=25% Similarity=0.742 Sum_probs=8.0
Q ss_pred CccccccCcccc
Q psy10221 9 LRYCVACGESIT 20 (67)
Q Consensus 9 ~~~C~~C~~~i~ 20 (67)
...|..|++.|.
T Consensus 14 pt~C~~C~~~l~ 25 (52)
T 1faq_A 14 LAFCDICQKFLL 25 (52)
T ss_dssp CEECTTSSSEEC
T ss_pred CcCCCCcccccc
Confidence 467777877653
No 314
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=20.57 E-value=62 Score=13.38 Aligned_cols=10 Identities=40% Similarity=1.331 Sum_probs=5.0
Q ss_pred ccccccCccc
Q psy10221 10 RYCVACGESI 19 (67)
Q Consensus 10 ~~C~~C~~~i 19 (67)
..|+.|+..+
T Consensus 19 ~fCPkCG~~~ 28 (55)
T 2k4x_A 19 RFCPRCGPGV 28 (55)
T ss_dssp CCCTTTTTTC
T ss_pred ccCcCCCCce
Confidence 4455555433
No 315
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=20.49 E-value=51 Score=16.36 Aligned_cols=11 Identities=18% Similarity=0.896 Sum_probs=6.5
Q ss_pred CCccccccCcc
Q psy10221 8 ELRYCVACGES 18 (67)
Q Consensus 8 ~~~~C~~C~~~ 18 (67)
+-..|.-|+.+
T Consensus 26 ~N~~CaDCg~~ 36 (134)
T 2iqj_A 26 DNKFCADCQSK 36 (134)
T ss_dssp GGGBCTTTCCB
T ss_pred CCCcCCcCcCC
Confidence 34567777654
No 316
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=20.48 E-value=40 Score=14.18 Aligned_cols=11 Identities=27% Similarity=1.056 Sum_probs=7.0
Q ss_pred ccccccCcccc
Q psy10221 10 RYCVACGESIT 20 (67)
Q Consensus 10 ~~C~~C~~~i~ 20 (67)
.+|..||+.|.
T Consensus 4 VRCFTCGkvi~ 14 (55)
T 1ef4_A 4 VRCLSCGKPVS 14 (55)
T ss_dssp SSCSCTTSCCH
T ss_pred eecCCCCCChh
Confidence 35666777664
No 317
>2zkr_u 60S ribosomal protein L24; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=20.34 E-value=50 Score=17.06 Aligned_cols=25 Identities=16% Similarity=0.216 Sum_probs=16.3
Q ss_pred CccccccCccccCcee---eeecCceec
Q psy10221 9 LRYCVACGESITDKYL---LQVSDKSWH 33 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~---~~~~~~~~h 33 (67)
...|..|+..|+++.. +...++.|+
T Consensus 3 ~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~ 30 (157)
T 2zkr_u 3 VELCSFSGYKIYPGHGRRYARTDGKVFQ 30 (157)
T ss_dssp -CBCTTTCCBCCTTCCEEEECTTSCEEE
T ss_pred eeeecCcCCcccCCCceEEEeeCCcEEE
Confidence 4679999999996543 334455554
No 318
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=20.20 E-value=40 Score=16.06 Aligned_cols=13 Identities=15% Similarity=0.680 Sum_probs=6.1
Q ss_pred CccccccCccccC
Q psy10221 9 LRYCVACGESITD 21 (67)
Q Consensus 9 ~~~C~~C~~~i~~ 21 (67)
...|..|..+|..
T Consensus 37 ~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 37 DKMCPGCSDPVQR 49 (101)
T ss_dssp CCBCTTTCCBCSE
T ss_pred CCCCcCcCCeeee
Confidence 3445555555443
No 319
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=20.16 E-value=58 Score=14.36 Aligned_cols=26 Identities=12% Similarity=-0.120 Sum_probs=12.8
Q ss_pred ccccccCccccCceeeeecCceecccc
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQC 36 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~c 36 (67)
-.|.-|.....+. ++..-|..|-..|
T Consensus 15 ~~CpI~~~~m~dP-V~~~cGhtf~r~~ 40 (85)
T 2kr4_A 15 FRDPLMDTLMTDP-VRLPSGTVMDRSI 40 (85)
T ss_dssp TBCTTTCSBCSSE-EECTTSCEEEHHH
T ss_pred eECcccCchhcCC-eECCCCCEECHHH
Confidence 4566666555553 3333444454444
No 320
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=20.14 E-value=64 Score=14.90 Aligned_cols=38 Identities=16% Similarity=0.370 Sum_probs=22.7
Q ss_pred ccccccCccccCceeeeecCceeccccc---------cccccccccCC
Q psy10221 10 RYCVACGESITDKYLLQVSDKSWHAQCL---------RCCICQLVLDR 48 (67)
Q Consensus 10 ~~C~~C~~~i~~~~~~~~~~~~~h~~cf---------~C~~C~~~l~~ 48 (67)
..|..|...+.+. +...=+..|+..|+ .|-.|..++..
T Consensus 24 ~~C~IC~~~~~~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 24 ISCQICEHILADP-VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp TBCTTTCSBCSSE-EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCcHhcCc-EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 4688888777664 33344555655553 45566666643
No 321
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=20.09 E-value=89 Score=20.75 Aligned_cols=32 Identities=22% Similarity=0.636 Sum_probs=19.1
Q ss_pred CccccccCccccCceeeeecCceeccccccccccccc
Q psy10221 9 LRYCVACGESITDKYLLQVSDKSWHAQCLRCCICQLV 45 (67)
Q Consensus 9 ~~~C~~C~~~i~~~~~~~~~~~~~h~~cf~C~~C~~~ 45 (67)
..+|..|+.-|-+--.+...++.| +|..|+..
T Consensus 228 pvRC~rCrAYiNPf~~~~~~g~~W-----~CnfC~~~ 259 (926)
T 1m2v_B 228 IVRCRRCRSYMNPFVTFIEQGRRW-----RCNFCRLA 259 (926)
T ss_dssp CCBCSSSCCBCCTTCEEETTTTEE-----ECTTTCCE
T ss_pred CCccCCccCEecCceEEeCCCCEE-----EccCCCCC
Confidence 567888877666532344445555 66666654
Done!