RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10225
(207 letters)
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 86.7 bits (214), Expect = 4e-23
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPSK 78
+ RALFDYD TKD G S+ L F +GD+LHV +A D+EWWQARRV + IG +PSK
Sbjct: 3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSK 62
Query: 79 KRWERKQRARDRTVKFQGH 97
+R ER++ +R + +
Sbjct: 63 RRVERREWSRLKAKDWGSS 81
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium
channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 83.1 bits (205), Expect = 9e-22
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 21 RALFDYDPTKDDGLPSR--GLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPSK 78
R Y ++D +P + F D LHV +++WW R V + IG +PS
Sbjct: 25 RTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCE---IGFIPSP 81
Query: 79 KRWERKQRARDRTVK 93
+ E + ++ K
Sbjct: 82 VKLENMRLQHEQRAK 96
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 83.6 bits (206), Expect = 2e-21
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 21 RALFDYDPTKDDGLPSRG--LPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPSK 78
R Y D+ P +G + F D LH+ ++WW R V GD I +PS
Sbjct: 27 RTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGD---IAFIPSP 83
Query: 79 KRWERKQRARDRTVKFQGHVP 99
+R E + +++ + G+
Sbjct: 84 QRLESIRLKQEQKARRSGNPS 104
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 78.2 bits (192), Expect = 2e-19
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 21 RALFDYDPTKDD--GLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPSK 78
+ Y D+ +PS + F D LH+ +++WW R V + IG +PS
Sbjct: 27 KTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCE---IGFIPSP 83
Query: 79 KRWERKQRARDRT 91
R E + +++
Sbjct: 84 LRLENIRIQQEQK 96
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 50.9 bits (122), Expect = 6e-10
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+ RALFD++ ++ LP F GDIL + + +++WW A G G++P
Sbjct: 3 YVRALFDFNGNDEEDLP-----FKKGDILRIRDKPEEQWWNAE--DSEGKR---GMIPV 51
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 50.8 bits (122), Expect = 7e-10
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 18 SFSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
++ +ALFD+DP +D L F GD +HV + SD WW+ G+ P
Sbjct: 2 TYVQALFDFDPQEDGELG-----FRRGDFIHVMDNSDPNWWKGAC------HGQTGMFPR 50
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 50.1 bits (120), Expect = 1e-09
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
F +ALFD++P + L F GD++ + N D WW+ + + GI PS
Sbjct: 4 FVQALFDFNPQESGELA-----FKRGDVITLINKDDPNWWEGQL---NNRR---GIFPS 51
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 49.0 bits (117), Expect = 3e-09
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 9/59 (15%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
++ A +DYD +D+ L F D + DD+WW + G+ PS
Sbjct: 2 WATAEYDYDAAEDNELT-----FVENDKIINIEFVDDDWWLGEL----EKDGSKGLFPS 51
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 49.0 bits (117), Expect = 5e-09
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+ALFDY ++D L F I+ + WW+ G ++ PS
Sbjct: 10 KALFDYKAQREDELT-----FIKSAIIQNVEKQEGGWWRGD----YGGKKQ-LWFPS 56
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 48.1 bits (115), Expect = 7e-09
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
RAL+D++ +D+ L F +G+++ V + SD WWQ +G G+ PS
Sbjct: 6 RALYDFEAVEDNELT-----FKHGELITVLDDSDANWWQGEN------HRGTGLFPS 51
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 48.2 bits (115), Expect = 8e-09
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY P + L GD + S+ WW+AR +G E G +PS
Sbjct: 12 VALYDYMPMNANDLQ-----LRKGDEYFILEESNLPWWRAR--DKNGQE---GYIPS 58
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 47.8 bits (114), Expect = 9e-09
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY + GDIL + N+++ +WW+ G VP+
Sbjct: 4 LALYDYQEKSPREVT-----MKKGDILTLLNSTNKDWWKVEV------NDRQGFVPA 49
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId:
9606]}
Length = 62
Score = 47.8 bits (114), Expect = 9e-09
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
ALF Y+ T+ + L F GDI+ V + ++EW + + +GI P
Sbjct: 9 EALFSYEATQPEDLE-----FQEGDIILVLSKVNEEWLEGES------KGKVGIFPK 54
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 47.8 bits (114), Expect = 1e-08
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
++RAL+D++ ++D L F G+++ V ++S+ WW R G+ P+
Sbjct: 3 WARALYDFEALEEDELG-----FRSGEVVEVLDSSNPSWWTGRL---HNKL---GLFPA 50
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 48.3 bits (115), Expect = 1e-08
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+A F++ T +D L GDI++VT + WW+ G PS
Sbjct: 14 KARFNFKQTNEDELS-----VCKGDIIYVTRVEEGGWWEGTL------NGRTGWFPS 59
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 47.8 bits (114), Expect = 1e-08
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY+ +D L FH G+ + N+S+ +WW+AR + +G+ G +PS
Sbjct: 4 VALYDYEAITEDDLS-----FHKGEKFQILNSSEGDWWEARSLT-TGET---GYIPS 51
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 47.8 bits (114), Expect = 1e-08
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
RA++DY D + F GD + A D+ W +G G++P+
Sbjct: 7 RAMYDYMAADADEVS-----FKDGDAIINVQAIDEGWMYGTV-QRTGRT---GMLPA 54
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 47.5 bits (113), Expect = 1e-08
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY+ + L F G+ L + N ++ +WW A G +PS
Sbjct: 6 VALYDYESRTETDLS-----FKKGERLQIVNNTEGDWWLAHS----LSTGQTGYIPS 53
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 46.8 bits (111), Expect = 4e-08
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 6/57 (10%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+ Y + + L G ++ + + WWQ Q G P+
Sbjct: 11 QVTSAYVASGSEQLS-----LAPGQLILILKKNTSGWWQGELQARGKKRQ-KGWFPA 61
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 46.8 bits (111), Expect = 5e-08
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
A++DY +D L F G +++V N D +WWQ +G G+ PS
Sbjct: 38 IAMYDYAANNEDELS-----FSKGQLINVMNKDDPDWWQGEI---NGVT---GLFPS 83
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 45.6 bits (108), Expect = 9e-08
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+AL+ D L F G + + S + W + G++P
Sbjct: 14 KALYACKAEHDSELS-----FTAGTVFDNVHPSQEPGWLEGTL-----NGKTGLIPE 60
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 45.2 bits (107), Expect = 1e-07
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
A++D+ T+ L G + +D WW+AR G E G +PS
Sbjct: 6 VAMYDFQATEAHDLR-----LERGQEYIILEKNDLHWWRARD--KYGSE---GYIPS 52
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 46.2 bits (109), Expect = 2e-07
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 12/86 (13%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSG-------DEQGIG 73
A+ Y + D + G+ + V + D WW R+ +G + G
Sbjct: 18 VAIKAYTAVEGDEVS-----LLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQD 72
Query: 74 IVPSKKRWERKQRARDRTVKFQGHVP 99
+ ++++ +R R +++ +
Sbjct: 73 VSQAQRQIKRGAPPRRSSIRNAHSIH 98
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN
cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 44.8 bits (106), Expect = 2e-07
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+ +F + + L L F GD+L + + + W + G PS
Sbjct: 11 KTIFPHTAGNNKTL----LSFAQGDVLTLLIPEEKDGWLYGEHDTTKAR---GWFPS 60
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 67
Score = 44.1 bits (104), Expect = 3e-07
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASD-----DEWWQARRVLPSGDEQGIG 73
F+RAL+D+ P + + GD++ + + D +WW+ R + + IG
Sbjct: 7 FARALYDFVPENPEM----EVALKKGDLMAILSKKDPLGRDSDWWKVR----TKNGN-IG 57
Query: 74 IVPS 77
+P
Sbjct: 58 YIPY 61
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 43.7 bits (103), Expect = 4e-07
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL Y+P+ D L F G+ L + S + W G +P
Sbjct: 10 IALHSYEPSHDGDLG-----FEKGEQLRILEQSGEWWKAQSLT-----TGQEGFIPF 56
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 43.2 bits (102), Expect = 6e-07
Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 12/57 (21%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+ Y + L F G+ + VT D EWW GI PS
Sbjct: 12 IALYPYSSVEPGDLT-----FTEGEEILVTQ-KDGEWWTGSI---GDRS---GIFPS 56
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 42.8 bits (101), Expect = 6e-07
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
A +D+ T DD L F GDIL V N D+ W + +G + G +P
Sbjct: 4 IAKYDFKATADDELS-----FKRGDILKVLNEECDQNWYKAEL--NGKD---GFIPK 50
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 65
Score = 42.9 bits (101), Expect = 7e-07
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY+ + L F GD + V S + W R L + E G +PS
Sbjct: 8 VALYDYEAIHHEDLS-----FQKGDQMVVLEESGEWWK--ARSLATRKE---GYIPS 54
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 42.9 bits (101), Expect = 9e-07
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDD--EWWQARRVLPSGDEQGIGIVPS 77
+ L+ + ++ L F G+ + V ++ EWW+ + + Q +G+VP
Sbjct: 10 QTLYPFSSVTEE-----ELNFEKGETMEVIEKPENDPEWWKCK----NARGQ-VGLVPK 58
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus
musculus [TaxId: 10090]}
Length = 53
Score = 42.2 bits (99), Expect = 9e-07
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 10/57 (17%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+DY L + ++ ++S+ WW+ + G PS
Sbjct: 2 IALYDYQTNDPQELA-----LRCDEEYYLLDSSEIHWWRVQD-----KNGHEGYAPS 48
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 42.5 bits (100), Expect = 1e-06
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDE-WWQARRVLPSGDEQGIGIVPS 77
A +++ T + LP F GD+L + + D W++A+ G E GI+P+
Sbjct: 10 IAKYNFHGTAEQDLP-----FCKGDVLTIVAVTKDPNWYKAK--NKVGRE---GIIPA 57
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 42.5 bits (100), Expect = 1e-06
Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 12/57 (21%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+AL + KD+ L F DI+ V ++ W+ G G P
Sbjct: 14 QALCSWTAKKDNHLN-----FSKHDIITVLEQQENWWFGEVH-------GGRGWFPK 58
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 40.9 bits (96), Expect = 4e-06
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 14/60 (23%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDD---EWWQARRVLPSGDEQGIGIVPS 77
AL+DY+P DD LP GD + + + D+ EWW AR + E G VP
Sbjct: 8 YALWDYEPQNDD-----ELPMKEGDCMTIIHREDEDEIEWWWARL---NDKE---GYVPR 56
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 41.0 bits (96), Expect = 5e-06
Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 15/61 (24%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASD----DEWWQARRVLPSGDEQGIGIVP 76
A++ + + L L + D EWW A +G + G VP
Sbjct: 17 FAVYTFKARNPNELS-----VSANQKLKILEFKDVTGNTEWWLAEV---NGKK---GYVP 65
Query: 77 S 77
S
Sbjct: 66 S 66
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 40.5 bits (95), Expect = 5e-06
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 12/58 (20%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASD-DEWWQARRVLPSGDEQGIGIVPS 77
AL+D+ + D+ L G+ L V + EW +A+ + G G VPS
Sbjct: 4 VALYDFVASGDNTLS-----ITKGEKLRVLGYNHNGEWCEAQT------KNGQGWVPS 50
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 40.5 bits (94), Expect = 8e-06
Identities = 8/57 (14%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+ DY K++ + G+++ V + + G VP
Sbjct: 11 TVIKDYYALKENEIC-----VSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPG 62
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 39.4 bits (92), Expect = 1e-05
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
AL+ + + LP F GD++ + SD + + +G E GI P+
Sbjct: 5 VALYSFAGEESGDLP-----FRKGDVITILKKSDSQNDWWTGRV-NGRE---GIFPA 52
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 40.1 bits (93), Expect = 1e-05
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 21 RALFDYDPTKDDGLPSRG-LPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
A + Y+P LP G L+V D++ + + D Q G+VPS
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGEL---LDGQ-RGLVPS 74
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 39.6 bits (92), Expect = 2e-05
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 14/66 (21%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASD-----DEWWQARRVLPSGDEQG---- 71
+A DY T D L GD++ V + + W + +
Sbjct: 16 QAQHDYTATDTDELQ-----LKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKC 70
Query: 72 IGIVPS 77
G+ P
Sbjct: 71 RGVFPE 76
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 38.4 bits (89), Expect = 2e-05
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 8/58 (13%)
Query: 20 SRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
++ L+ Y DD + GD + + W G+VP+
Sbjct: 2 NKVLYAYVQKDDD-----EITITPGDKISLVARDTGSGWTKINN---DTTGETGLVPT 51
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 38.3 bits (89), Expect = 3e-05
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
RA+ DY+ T + GD++ V S+ WW + + G +P+
Sbjct: 6 RAIADYEKTSGSEMA-----LSTGDVVEVVEKSESGWWFCQM------KAKRGWIPA 51
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 38.1 bits (88), Expect = 6e-05
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 13/59 (22%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDE--WWQARRVLPSGDEQGIGIVPS 77
RAL+ ++ D + F+ GDI+ V + E W + G P
Sbjct: 9 RALYPFEARNHD-----EMSFNSGDIIQVDEKTVGEPGWLYGSF------QGNFGWFPC 56
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 59
Score = 37.2 bits (86), Expect = 9e-05
Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 11/59 (18%)
Query: 19 FSRALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
++++ +D+ L D+L + + WW+ R G VP+
Sbjct: 3 YAKSKYDFVARNSS-----ELSVMKDDVLEILDDRRQ-WWKVRNA-----SGDSGFVPN 50
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 36.8 bits (85), Expect = 1e-04
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 11/57 (19%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
A+ Y + D + G+ + V + D WW R+ + G PS
Sbjct: 4 VAIKAYTAVEGDEVS-----LLEGEAVEVIHKLLDGWWVIRK------DDVTGYFPS 49
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 35.6 bits (82), Expect = 3e-04
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 21 RALFDYDPTKDDGLPSRG-LPFHYGDILHVTNASDDEWWQARRVLPSGDEQGIGIVPS 77
+Y L + GDI+ +T A + W R + + G P
Sbjct: 8 EVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEV---GWFPC 62
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 35.9 bits (82), Expect = 4e-04
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARRVLPSGDEQG 71
RAL+DY +++ + H GDIL V S + +E G
Sbjct: 7 RALYDYKKEREE-----DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIG 52
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 32.8 bits (74), Expect = 0.007
Identities = 14/70 (20%), Positives = 22/70 (31%), Gaps = 10/70 (14%)
Query: 13 STHLFSFSRALFDYDPTKDDGLPSRGLPFHYGDILHVT---NASDDEWWQARRVLPSGDE 69
+H S + AL DY L H G +++V +W +
Sbjct: 17 CSHPISMAVALQDYMAPDCR-----FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGD 71
Query: 70 QG--IGIVPS 77
+G PS
Sbjct: 72 LAARLGYFPS 81
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 27.5 bits (60), Expect = 0.47
Identities = 2/42 (4%), Positives = 12/42 (28%), Gaps = 2/42 (4%)
Query: 21 RALFDYDPTKDDGLPSRGLPFHYGDILHVTNASDDEWWQARR 62
+A +++ +D + ++ + +
Sbjct: 21 QAERNFNAAQDLDVSLL--EGDLVGVIKKKDPMGSQNRWLID 60
>d1eo6a_ d.15.1.3 (A:) Golgi-associated ATPase enhancer of 16 kD,
Gate-16 {Cow (Bos taurus) [TaxId: 9913]}
Length = 116
Score = 25.8 bits (57), Expect = 2.1
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 82 ERKQRARDRTVKFQGHVPVLLEKVSITQFSMIELNTIFKLIEKSVALG 129
R + K+ VPV++EKVS +Q +++++ L+ + +
Sbjct: 13 HRCVESAKIRAKYPDRVPVIVEKVSGSQ--IVDIDKRKYLVPSDITVA 58
>d1heka_ a.61.1.5 (A:) EIAV matrix antigen {Equine infectious
anemia virus, EIAV [TaxId: 11665]}
Length = 116
Score = 24.7 bits (53), Expect = 5.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 45 DILHVTNASDDEWWQARRVLP 65
D+ H TN ++ WQ R V+P
Sbjct: 45 DLFHDTNFVKEKDWQLRDVIP 65
>d1ccwb_ c.1.19.2 (B:) Glutamate mutase, large subunit {Clostridium
cochlearium [TaxId: 1494]}
Length = 483
Score = 25.2 bits (55), Expect = 7.3
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 103 EKVSITQFSMIELNTIFKLIEKSVALGLTRGLKAGQMTSNFKEHKYLDLDV-----PIGT 157
E I + L+ +F+L + +A+G + + G M F KY + +G
Sbjct: 368 EMAVIKAETKCILDKMFELGKGDLAIGTVKAFETGVMDIPFGPSKYNAGKMMPVRDNLGC 427
Query: 158 IRRFQYG 164
+R ++G
Sbjct: 428 VRYLEFG 434
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.412
Gapped
Lambda K H
0.267 0.0655 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 795,364
Number of extensions: 36876
Number of successful extensions: 169
Number of sequences better than 10.0: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 56
Length of query: 207
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 126
Effective length of database: 1,295,466
Effective search space: 163228716
Effective search space used: 163228716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.6 bits)