Query psy10226
Match_columns 208
No_of_seqs 170 out of 1747
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 21:07:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i1n_A Discs, large homolog 3; 99.7 3.3E-17 1.1E-21 116.8 13.3 91 12-102 2-92 (102)
2 3gsl_A Disks large homolog 4; 99.7 9.2E-17 3.1E-21 126.4 15.4 121 11-131 2-190 (196)
3 3gge_A PDZ domain-containing p 99.7 8.1E-17 2.8E-21 113.2 12.4 79 13-98 4-84 (95)
4 2fe5_A Presynaptic protein SAP 99.7 7E-17 2.4E-21 113.3 11.9 88 13-100 2-89 (94)
5 2byg_A Channel associated prot 99.7 1.2E-16 4.1E-21 117.0 11.9 89 14-102 24-112 (117)
6 1r6j_A Syntenin 1; PDZ, membra 99.7 8.4E-17 2.9E-21 110.6 10.1 74 14-100 4-78 (82)
7 2awx_A Synapse associated prot 99.7 1.4E-16 4.7E-21 114.2 11.3 89 14-102 3-91 (105)
8 1i16_A Interleukin 16, LCF; cy 99.7 1.2E-16 4.2E-21 119.0 10.7 90 11-102 26-116 (130)
9 3egg_C Spinophilin; PP1, serin 99.7 2.3E-16 7.9E-21 122.8 12.0 91 12-102 78-169 (170)
10 1uhp_A Hypothetical protein KI 99.7 4.1E-16 1.4E-20 112.1 12.3 92 9-100 3-97 (107)
11 3b76_A E3 ubiquitin-protein li 99.7 3.8E-16 1.3E-20 114.6 11.8 88 13-102 23-111 (118)
12 2jik_A Synaptojanin-2 binding 99.7 6.1E-16 2.1E-20 109.9 12.4 90 13-102 6-95 (101)
13 1wha_A KIAA0147 protein, scrib 99.7 3.4E-16 1.2E-20 112.2 10.9 96 8-103 1-97 (105)
14 2eno_A Synaptojanin-2-binding 99.7 9.3E-16 3.2E-20 112.5 13.4 96 5-100 7-103 (120)
15 1wf8_A Neurabin-I; PDZ domain, 99.7 6.2E-16 2.1E-20 111.2 11.9 92 9-102 4-98 (107)
16 1uep_A Membrane associated gua 99.7 4.3E-16 1.5E-20 111.3 11.0 89 10-103 5-95 (103)
17 2d92_A INAD-like protein; PDZ 99.7 3.5E-16 1.2E-20 112.7 10.6 89 13-102 14-103 (108)
18 1wi4_A Synip, syntaxin binding 99.7 9.7E-16 3.3E-20 110.8 11.3 80 10-93 11-90 (109)
19 2jil_A GRIP1 protein, glutamat 99.7 1.7E-15 5.7E-20 106.8 12.2 90 13-103 2-91 (97)
20 1ujd_A KIAA0559 protein; PDZ d 99.7 4.6E-16 1.6E-20 113.8 9.4 91 12-102 10-107 (117)
21 2q9v_A Membrane-associated gua 99.7 6.9E-16 2.4E-20 107.3 9.9 83 13-100 1-85 (90)
22 2xkx_A Disks large homolog 4; 99.7 1.7E-15 5.9E-20 141.4 15.7 130 3-132 48-245 (721)
23 1ueq_A Membrane associated gua 99.7 2.3E-15 8E-20 110.9 13.1 88 6-98 11-100 (123)
24 2vwr_A Ligand of NUMB protein 99.7 1.9E-15 6.4E-20 106.2 12.0 85 12-102 1-87 (95)
25 4amh_A Disks large homolog 1; 99.6 8.5E-16 2.9E-20 110.5 10.1 84 19-102 7-90 (106)
26 2csj_A TJP2 protein; PDZ domai 99.6 1.7E-15 5.8E-20 110.6 11.5 90 9-100 9-100 (117)
27 3cbz_A Dishevelled-2; PDZ doma 99.6 6.5E-16 2.2E-20 111.4 9.2 86 13-101 4-93 (108)
28 1g9o_A NHE-RF; PDZ domain, com 99.6 2E-15 6.7E-20 105.2 11.3 80 13-99 2-81 (91)
29 1d5g_A Human phosphatase HPTP1 99.6 2.6E-15 8.8E-20 105.7 12.0 87 13-101 4-90 (96)
30 3o46_A Maguk P55 subfamily mem 99.6 1.7E-15 5.9E-20 106.1 10.9 82 13-100 3-84 (93)
31 3r0h_A INAD, inactivation-NO-a 99.6 6.1E-15 2.1E-19 117.3 15.3 119 13-134 17-199 (206)
32 2qg1_A Multiple PDZ domain pro 99.6 2.4E-15 8.2E-20 105.0 11.4 85 12-102 2-87 (92)
33 2h2b_A Tight junction protein 99.6 6.7E-15 2.3E-19 105.6 13.9 93 8-102 1-95 (107)
34 3l4f_D SH3 and multiple ankyri 99.6 4.1E-15 1.4E-19 111.1 12.9 93 8-101 21-121 (132)
35 2dmz_A INAD-like protein; PDZ 99.6 2.7E-15 9.2E-20 111.3 11.7 99 2-100 3-102 (129)
36 1ufx_A KIAA1526 protein; PDZ d 99.6 1.2E-15 4.1E-20 109.3 9.4 74 15-92 7-80 (103)
37 2g5m_B Neurabin-2; spinophilin 99.6 1.2E-15 4.1E-20 110.6 9.5 90 11-102 1-93 (113)
38 3axa_A Afadin, nectin-3, prote 99.6 2.5E-15 8.6E-20 107.7 10.9 89 10-101 7-95 (106)
39 3i4w_A Disks large homolog 4; 99.6 3.8E-15 1.3E-19 106.2 11.4 87 10-102 7-93 (104)
40 3hpk_A Protein interacting wit 99.6 5.7E-15 1.9E-19 109.0 12.7 88 11-103 16-104 (125)
41 2r4h_A Membrane-associated gua 99.6 3.2E-15 1.1E-19 108.4 11.1 85 11-100 21-105 (112)
42 2fne_A Multiple PDZ domain pro 99.6 8.6E-16 2.9E-20 112.4 8.0 88 12-101 23-110 (117)
43 4e34_A Golgi-associated PDZ an 99.6 2.5E-15 8.7E-20 103.8 10.0 81 14-100 2-84 (87)
44 2iwo_A Multiple PDZ domain pro 99.6 1.2E-15 4.1E-20 112.1 8.8 90 11-102 21-111 (120)
45 2jre_A C60-1 PDZ domain peptid 99.6 5.8E-15 2E-19 106.1 12.1 93 10-102 8-102 (108)
46 2dkr_A LIN-7 homolog B; LIN-7B 99.6 4.2E-15 1.4E-19 103.9 11.0 85 13-102 4-88 (93)
47 2he4_A Na(+)/H(+) exchange reg 99.6 3.4E-15 1.1E-19 103.9 10.5 83 12-101 2-84 (90)
48 2cs5_A Tyrosine-protein phosph 99.6 1.6E-15 5.4E-20 111.1 9.0 91 2-98 3-100 (119)
49 2dc2_A GOPC, golgi associated 99.6 2.6E-15 9.1E-20 107.3 10.0 84 13-102 8-93 (103)
50 2ehr_A INAD-like protein; PDZ 99.6 5.6E-15 1.9E-19 107.8 11.8 92 11-102 12-108 (117)
51 2daz_A INAD-like protein; PDZ 99.6 5.5E-15 1.9E-19 109.0 11.8 87 12-102 23-109 (124)
52 1um1_A KIAA1849 protein, RSGI 99.6 7.5E-15 2.6E-19 105.9 12.3 90 11-102 5-94 (110)
53 2dlu_A INAD-like protein; PDZ 99.6 6.9E-15 2.4E-19 106.3 11.8 80 13-99 14-93 (111)
54 1qav_A Alpha-1 syntrophin (res 99.6 4.5E-15 1.5E-19 103.2 10.3 84 13-101 3-87 (90)
55 2i04_A Membrane-associated gua 99.6 7.1E-15 2.4E-19 101.1 11.2 80 16-100 2-83 (85)
56 2db5_A INAD-like protein; PDZ 99.6 3.2E-15 1.1E-19 110.9 9.9 84 14-99 25-110 (128)
57 1q7x_A PDZ2B domain of PTP-BAS 99.6 3.9E-15 1.3E-19 107.1 10.0 88 13-102 8-100 (108)
58 1wi2_A Riken cDNA 2700099C19; 99.6 8E-15 2.7E-19 104.8 11.3 91 4-101 5-96 (104)
59 1wg6_A Hypothetical protein (r 99.6 1.7E-15 5.8E-20 112.4 7.8 89 13-102 24-120 (127)
60 1n7e_A AMPA receptor interacti 99.6 1.1E-14 3.9E-19 102.6 11.7 83 13-100 4-86 (97)
61 1uew_A Membrane associated gua 99.6 1.9E-14 6.4E-19 104.6 12.9 91 8-99 4-98 (114)
62 2opg_A Multiple PDZ domain pro 99.6 1.8E-14 6.3E-19 101.6 12.4 85 14-102 4-88 (98)
63 2kpk_A Membrane-associated gua 99.6 6.1E-15 2.1E-19 109.6 10.4 84 10-98 14-99 (129)
64 1wfg_A Regulating synaptic mem 99.6 1.2E-14 4E-19 108.4 11.6 90 11-102 24-125 (131)
65 1n7t_A 99-MER peptide of densi 99.6 1.1E-14 3.6E-19 103.9 10.9 92 8-102 5-99 (103)
66 1uju_A Scribble; PDZ domain, c 99.6 3.1E-15 1E-19 108.2 7.9 91 13-103 8-103 (111)
67 2uzc_A Human pdlim5, PDZ and L 99.6 1E-14 3.5E-19 100.9 10.3 81 14-101 3-83 (88)
68 1v62_A KIAA1719 protein; struc 99.6 1.1E-14 3.7E-19 106.4 10.9 86 10-99 11-97 (117)
69 1mfg_A ERB-B2 interacting prot 99.6 3.2E-14 1.1E-18 99.9 12.9 85 15-102 4-91 (95)
70 2ego_A General receptor for ph 99.6 1.6E-14 5.4E-19 101.8 11.3 88 12-100 2-92 (96)
71 2f5y_A Regulator of G-protein 99.6 1.4E-14 4.8E-19 101.0 10.9 80 13-102 2-81 (91)
72 1tp5_A Presynaptic density pro 99.6 1.3E-14 4.4E-19 106.1 10.9 91 6-102 6-96 (119)
73 1ihj_A INAD; intermolecular di 99.6 1.7E-14 5.8E-19 101.8 10.8 88 15-102 6-95 (98)
74 2v90_A PDZ domain-containing p 99.6 1.6E-14 5.6E-19 101.6 10.6 85 13-101 2-86 (96)
75 1m5z_A GRIP, AMPA receptor int 99.6 2.8E-14 9.6E-19 99.3 11.7 84 12-102 4-89 (91)
76 3r68_A Na(+)/H(+) exchange reg 99.6 9.7E-15 3.3E-19 102.4 9.2 81 13-100 4-84 (95)
77 3nfk_A Tyrosine-protein phosph 99.6 7.7E-15 2.6E-19 105.3 8.7 85 11-100 14-104 (107)
78 1kwa_A Hcask/LIN-2 protein; PD 99.6 1.9E-14 6.4E-19 100.0 10.3 78 15-100 2-81 (88)
79 2q3g_A PDZ and LIM domain prot 99.6 2E-14 6.7E-19 99.7 10.3 83 13-102 2-84 (89)
80 2djt_A Unnamed protein product 99.6 1.6E-14 5.4E-19 103.1 10.1 88 11-101 8-95 (104)
81 2d90_A PDZ domain containing p 99.6 1.9E-14 6.7E-19 102.3 10.5 82 11-99 3-84 (102)
82 2o2t_A Multiple PDZ domain pro 99.6 7.7E-15 2.6E-19 107.0 8.4 89 12-102 18-108 (117)
83 2koj_A Partitioning defective 99.6 4.9E-14 1.7E-18 101.7 12.4 89 10-100 7-97 (111)
84 1x5q_A LAP4 protein; PDZ domai 99.6 1.2E-13 4.1E-18 99.5 14.3 96 6-102 7-103 (110)
85 2eei_A PDZ domain-containing p 99.6 9.4E-15 3.2E-19 104.6 8.2 84 9-99 3-86 (106)
86 2w4f_A Protein LAP4; structura 99.6 4.7E-14 1.6E-18 99.2 11.6 89 13-102 2-91 (97)
87 3soe_A Membrane-associated gua 99.6 4.7E-14 1.6E-18 102.5 11.7 79 13-102 11-91 (113)
88 3qe1_A Sorting nexin-27, G pro 99.6 6.2E-14 2.1E-18 100.5 12.1 89 13-102 5-100 (107)
89 2iwn_A Multiple PDZ domain pro 99.6 4.9E-14 1.7E-18 98.9 11.3 89 12-101 2-90 (97)
90 1rgw_A ZAsp protein; PDZ, cyph 99.5 2E-14 6.7E-19 98.8 8.6 79 15-100 2-80 (85)
91 1q3o_A Shank1; PDZ, GKAP, pept 99.5 1E-13 3.5E-18 99.8 12.5 87 13-100 6-100 (109)
92 2kv8_A RGS12, regulator of G-p 99.5 7.4E-15 2.5E-19 100.6 6.1 78 14-101 2-79 (83)
93 1wfv_A Membrane associated gua 99.5 5.7E-15 1.9E-19 105.1 5.6 86 10-100 7-92 (103)
94 1nf3_C PAR-6B; semi-CRIB motif 99.5 1.9E-14 6.5E-19 106.8 8.5 93 9-101 24-122 (128)
95 1x6d_A Interleukin-16; PDZ dom 99.5 5.4E-14 1.9E-18 102.8 10.8 80 13-96 14-94 (119)
96 2vsp_A PDZ domain-containing p 99.5 1.1E-14 3.8E-19 101.5 6.8 81 14-101 3-83 (91)
97 2qkv_A Inactivation-NO-after-p 99.5 4.9E-14 1.7E-18 99.3 10.0 84 10-101 4-88 (96)
98 2dls_A PDZ-rhogef, RHO guanine 99.5 1.6E-13 5.3E-18 96.1 12.3 79 13-102 7-85 (93)
99 2ejy_A 55 kDa erythrocyte memb 99.5 5.7E-14 2E-18 99.4 10.0 79 15-100 13-92 (97)
100 2la8_A Inactivation-NO-after-p 99.5 3.2E-14 1.1E-18 102.3 8.8 78 13-98 1-79 (106)
101 2kom_A Partitioning defective 99.5 1.9E-13 6.4E-18 100.4 13.0 90 10-101 26-117 (121)
102 1um7_A Synapse-associated prot 99.5 2.7E-14 9.3E-19 103.2 8.2 89 8-102 9-97 (113)
103 3e17_A Tight junction protein 99.5 7.3E-14 2.5E-18 97.0 9.8 72 17-99 3-76 (88)
104 2yt7_A Amyloid beta A4 precurs 99.5 2E-13 6.8E-18 97.0 12.1 86 13-101 8-96 (101)
105 1z87_A Alpha-1-syntrophin; pro 99.5 1.8E-14 6.3E-19 119.2 7.5 84 12-101 75-160 (263)
106 1whd_A RGS3, regulator of G-pr 99.5 3.5E-14 1.2E-18 100.8 7.8 87 6-102 7-93 (100)
107 2pa1_A PDZ and LIM domain prot 99.5 9.9E-14 3.4E-18 95.8 9.8 78 18-101 4-82 (87)
108 2eeg_A PDZ and LIM domain prot 99.5 6.3E-14 2.1E-18 98.3 8.9 81 13-100 7-87 (94)
109 2gzv_A PRKCA-binding protein; 99.5 1.8E-13 6.1E-18 99.6 11.5 84 12-100 22-106 (114)
110 1v6b_A Harmonin isoform A1; st 99.5 7.5E-14 2.6E-18 102.1 9.5 80 15-99 19-102 (118)
111 2jxo_A Ezrin-radixin-moesin-bi 99.5 1.9E-13 6.6E-18 96.3 11.1 81 12-99 7-88 (98)
112 2dm8_A INAD-like protein; PDZ 99.5 5.4E-14 1.8E-18 102.2 8.4 82 14-99 17-98 (116)
113 3bpu_A Membrane-associated gua 99.5 2.6E-13 8.8E-18 93.8 11.1 79 14-101 3-83 (88)
114 1v5q_A GRIP1 homolog, glutamat 99.5 2.7E-13 9.3E-18 99.6 11.9 91 8-99 9-102 (122)
115 1wf7_A Enigma homologue protei 99.5 6E-14 2.1E-18 100.0 8.0 80 13-99 4-83 (103)
116 3khf_A Microtubule-associated 99.5 1.1E-13 3.7E-18 97.8 9.0 84 17-101 5-90 (99)
117 3ngh_A PDZ domain-containing p 99.5 1.7E-13 5.8E-18 98.0 9.9 80 15-101 2-82 (106)
118 1va8_A Maguk P55 subfamily mem 99.5 3.3E-13 1.1E-17 97.9 11.3 80 14-101 25-105 (113)
119 2krg_A Na(+)/H(+) exchange reg 99.5 9.6E-13 3.3E-17 106.0 14.3 83 11-100 6-89 (216)
120 2iwq_A Multiple PDZ domain pro 99.5 3.2E-13 1.1E-17 99.5 10.6 92 10-101 20-116 (123)
121 2pkt_A PDZ and LIM domain prot 99.5 3.8E-13 1.3E-17 93.5 10.5 81 15-102 4-84 (91)
122 2fcf_A Multiple PDZ domain pro 99.5 3.7E-13 1.3E-17 95.7 10.3 90 13-102 3-97 (103)
123 2vsv_A Rhophilin-2; scaffold p 99.5 2.2E-13 7.6E-18 98.4 9.0 77 14-100 23-100 (109)
124 2yuy_A RHO GTPase activating p 99.5 5.7E-14 1.9E-18 103.9 5.8 90 12-102 6-118 (126)
125 2z17_A Pleckstrin homology SEC 99.5 3.9E-13 1.3E-17 95.9 9.5 87 12-99 13-102 (104)
126 2edz_A PDZ domain-containing p 99.5 7.2E-13 2.5E-17 96.1 11.1 90 6-102 5-95 (114)
127 2eeh_A PDZ domain-containing p 99.5 5.6E-13 1.9E-17 94.4 10.2 85 10-101 6-91 (100)
128 3k1r_A Harmonin; protein-prote 99.4 2.4E-13 8.2E-18 107.5 9.0 82 13-101 83-165 (192)
129 1ujv_A Membrane associated gua 99.4 2.3E-12 7.8E-17 90.8 13.0 83 9-102 5-89 (96)
130 3kzd_A TIAM-1, T-lymphoma inva 99.4 5.8E-13 2E-17 93.6 9.5 83 10-99 2-87 (94)
131 3gsl_A Disks large homolog 4; 99.4 7.5E-13 2.6E-17 103.8 11.3 90 14-103 100-189 (196)
132 1wif_A RSGI RUH-020, riken cDN 99.4 3.4E-13 1.2E-17 99.9 8.1 79 14-100 27-107 (126)
133 2e7k_A Maguk P55 subfamily mem 99.4 2.7E-13 9.2E-18 94.6 7.1 78 14-100 6-84 (91)
134 2edp_A Fragment, shroom family 99.4 1.4E-13 4.8E-18 97.6 5.4 85 10-102 7-92 (100)
135 2edv_A FERM and PDZ domain-con 99.4 2.3E-13 8E-18 95.8 6.4 79 13-102 7-87 (96)
136 2qbw_A PDZ-fibronectin fusion 99.4 1.4E-12 4.9E-17 102.7 11.5 76 25-102 2-80 (195)
137 1uit_A Human discs large 5 pro 99.4 1.3E-12 4.5E-17 95.1 10.4 77 15-99 20-96 (117)
138 2qt5_A Glutamate receptor-inte 99.4 1.9E-12 6.5E-17 102.5 11.9 86 13-103 6-92 (200)
139 2lob_A Golgi-associated PDZ an 99.1 2E-14 6.8E-19 104.4 0.0 81 13-99 26-108 (112)
140 1x5n_A Harmonin; PDZ domain, u 99.4 2.7E-12 9.4E-17 92.9 11.2 84 9-99 10-94 (114)
141 2kjd_A Sodium/hydrogen exchang 99.4 2.4E-12 8.4E-17 95.0 11.1 82 11-99 6-88 (128)
142 3sfj_A TAX1-binding protein 3; 99.4 1.8E-12 6.1E-17 92.3 10.0 84 17-101 7-102 (104)
143 1y7n_A Amyloid beta A4 precurs 99.4 3.1E-12 1.1E-16 89.1 10.4 71 16-99 13-85 (90)
144 1vb7_A PDZ and LIM domain 2; P 99.4 5.4E-13 1.8E-17 93.4 6.1 74 22-101 13-86 (94)
145 1p1d_A PDZ45, glutamate recept 99.4 4E-12 1.4E-16 100.5 10.7 90 12-102 4-96 (196)
146 2vz5_A TAX1-binding protein 3; 99.4 2.9E-12 1E-16 96.3 9.4 89 13-102 22-122 (139)
147 1qau_A Neuronal nitric oxide s 99.4 7.4E-12 2.5E-16 90.3 10.8 81 15-102 2-85 (112)
148 1uez_A KIAA1526 protein; PDZ d 99.4 8.7E-13 3E-17 93.5 5.7 79 13-98 7-87 (101)
149 3tsv_A Tight junction protein 99.3 8.4E-12 2.9E-16 92.0 10.6 75 20-102 34-110 (124)
150 1v5l_A PDZ and LIM domain 3; a 99.3 1.4E-12 4.6E-17 93.0 5.3 77 16-99 7-83 (103)
151 2d8i_A T-cell lymphoma invasio 99.3 6.5E-12 2.2E-16 91.3 9.1 80 13-99 14-96 (114)
152 3shw_A Tight junction protein 99.3 6.9E-12 2.4E-16 111.4 11.0 79 15-102 2-82 (468)
153 1vae_A Rhophilin 2, rhophilin, 99.3 9.1E-13 3.1E-17 95.4 4.1 74 15-98 16-90 (111)
154 3r0h_A INAD, inactivation-NO-a 99.3 1.2E-11 4.2E-16 98.0 10.8 85 12-104 111-196 (206)
155 3suz_A Amyloid beta A4 precurs 99.3 1.1E-12 3.8E-17 114.3 3.4 82 14-98 204-288 (388)
156 3cyy_A Tight junction protein 99.3 4.8E-11 1.6E-15 82.8 11.0 75 15-100 3-79 (92)
157 3qik_A Phosphatidylinositol 3, 99.3 2.5E-11 8.6E-16 86.0 9.4 78 13-99 16-96 (101)
158 2qt5_A Glutamate receptor-inte 99.3 4.8E-11 1.7E-15 94.4 11.3 88 14-102 106-193 (200)
159 1uf1_A KIAA1526 protein; PDZ d 99.2 5.9E-11 2E-15 87.6 10.8 78 14-98 20-98 (128)
160 2eaq_A LIM domain only protein 99.2 7.7E-11 2.6E-15 81.5 10.5 80 13-101 2-86 (90)
161 3tsz_A Tight junction protein 99.2 4.2E-11 1.4E-15 104.4 11.0 80 14-102 9-90 (391)
162 1b8q_A Protein (neuronal nitri 99.2 1.5E-11 5E-16 90.8 6.9 80 13-99 7-89 (127)
163 2xkx_A Disks large homolog 4; 99.2 7.1E-11 2.4E-15 110.3 12.6 88 14-107 307-394 (721)
164 2rcz_A Tight junction protein 99.2 1.2E-10 4E-15 78.6 10.3 66 24-100 12-77 (81)
165 1wh1_A KIAA1095 protein; PDZ d 99.2 4.9E-11 1.7E-15 87.7 7.1 85 9-98 14-101 (124)
166 1w9e_A Syntenin 1; cell adhesi 99.2 2.8E-10 9.5E-15 87.5 11.1 79 13-100 3-83 (166)
167 2yub_A LIMK-2, LIM domain kina 99.0 2.1E-09 7.1E-14 78.4 9.1 80 17-99 15-100 (118)
168 1p1d_A PDZ45, glutamate recept 99.0 2.1E-09 7.2E-14 84.7 9.7 83 16-101 109-192 (196)
169 1w9e_A Syntenin 1; cell adhesi 98.6 2.1E-07 7.2E-12 71.2 10.2 71 16-99 90-161 (166)
170 3suz_A Amyloid beta A4 precurs 98.5 9.1E-09 3.1E-13 89.5 0.0 63 24-99 307-369 (388)
171 2pzd_A Serine protease HTRA2; 98.4 8.6E-07 2.9E-11 63.5 7.5 53 43-99 34-86 (113)
172 3rle_A Golgi reassembly-stacki 98.4 5.9E-07 2E-11 71.5 6.7 57 43-100 15-72 (209)
173 2kl1_A YLBL protein; structure 98.4 6E-07 2.1E-11 62.5 5.5 54 43-100 4-59 (94)
174 2kjp_A Uncharacterized protein 98.3 2.4E-07 8.1E-12 64.3 3.1 51 45-99 2-54 (91)
175 1fc6_A Photosystem II D1 prote 98.3 1.7E-06 5.8E-11 75.0 9.1 71 24-100 84-155 (388)
176 3i18_A LMO2051 protein; alpha- 98.3 2.6E-06 8.9E-11 59.8 7.9 54 43-100 6-61 (100)
177 2l97_A HTRA, putative serine p 98.3 3E-06 1E-10 62.8 8.1 54 43-100 56-111 (134)
178 2p3w_A Probable serine proteas 98.2 2.7E-06 9.3E-11 60.8 6.9 53 43-99 34-86 (112)
179 2zpm_A Regulator of sigma E pr 98.2 2.5E-06 8.7E-11 58.4 5.4 52 45-99 5-57 (91)
180 3id1_A Regulator of sigma E pr 98.2 5.6E-06 1.9E-10 57.6 7.1 50 47-99 5-56 (95)
181 4a8c_A Periplasmic PH-dependen 98.1 8.5E-06 2.9E-10 71.7 9.4 55 43-100 362-416 (436)
182 3k50_A Putative S41 protease; 98.1 2.8E-06 9.5E-11 74.2 5.4 72 24-102 73-144 (403)
183 2i6v_A General secretion pathw 98.1 3.3E-06 1.1E-10 57.6 4.1 53 45-100 20-74 (87)
184 2i4s_A General secretion pathw 98.0 1.6E-05 5.5E-10 56.1 6.8 53 45-100 38-92 (105)
185 1y8t_A Hypothetical protein RV 98.0 1.3E-05 4.5E-10 67.6 7.5 55 43-100 241-297 (324)
186 3stj_A Protease DEGQ; serine p 97.9 2E-05 6.8E-10 67.4 7.5 56 43-101 262-319 (345)
187 3rle_A Golgi reassembly-stacki 97.9 2.3E-05 7.8E-10 62.2 7.2 69 25-99 95-165 (209)
188 4a8c_A Periplasmic PH-dependen 97.9 1.8E-05 6.2E-10 69.6 6.9 56 43-101 262-319 (436)
189 1te0_A Protease DEGS; two doma 97.9 3.5E-05 1.2E-09 64.9 8.1 55 43-100 243-299 (318)
190 4fgm_A Aminopeptidase N family 97.9 1.8E-05 6.2E-10 72.3 6.8 65 25-101 485-551 (597)
191 2hga_A Conserved protein MTH13 97.9 5.1E-05 1.7E-09 55.5 7.9 53 43-99 24-78 (125)
192 3pv2_A DEGQ; trypsin fold, PDZ 97.8 1.7E-05 5.8E-10 70.1 5.2 55 43-100 385-439 (451)
193 1lcy_A HTRA2 serine protease; 97.8 4.3E-05 1.5E-09 64.6 6.9 53 43-99 255-307 (325)
194 3pv2_A DEGQ; trypsin fold, PDZ 97.8 2.2E-05 7.5E-10 69.4 5.2 56 44-102 282-339 (451)
195 3qo6_A Protease DO-like 1, chl 97.6 5E-05 1.7E-09 64.8 5.3 54 44-100 251-317 (348)
196 1ky9_A Protease DO, DEGP, HTRA 97.6 1.1E-05 3.6E-10 71.4 0.0 53 43-98 382-434 (448)
197 3num_A Serine protease HTRA1; 97.4 2.5E-05 8.4E-10 66.2 0.0 53 43-99 253-305 (332)
198 1k32_A Tricorn protease; prote 97.2 0.00071 2.4E-08 64.9 8.0 68 24-102 736-813 (1045)
199 1ky9_A Protease DO, DEGP, HTRA 97.1 9.4E-05 3.2E-09 65.3 0.8 54 44-100 286-341 (448)
200 4fln_A Protease DO-like 2, chl 96.4 0.0058 2E-07 55.1 6.7 36 43-80 276-311 (539)
201 4fln_A Protease DO-like 2, chl 95.9 0.014 5E-07 52.5 6.9 54 42-98 413-467 (539)
202 1r6j_A Syntenin 1; PDZ, membra 93.5 0.14 4.9E-06 34.1 5.1 41 89-130 41-81 (82)
203 3gge_A PDZ domain-containing p 91.6 0.39 1.3E-05 33.0 5.5 44 91-134 48-93 (95)
204 3soe_A Membrane-associated gua 89.1 0.97 3.3E-05 31.9 5.9 42 91-132 51-94 (113)
205 3e17_A Tight junction protein 88.4 1.1 3.7E-05 29.6 5.6 44 91-134 41-84 (88)
206 1v62_A KIAA1719 protein; struc 85.3 3.1 0.00011 28.9 6.8 43 91-133 62-104 (117)
207 2csj_A TJP2 protein; PDZ domai 84.0 2.7 9.3E-05 29.1 6.0 44 91-134 64-107 (117)
208 3cbz_A Dishevelled-2; PDZ doma 83.9 2.7 9.1E-05 28.8 5.9 42 91-132 53-97 (108)
209 3egg_C Spinophilin; PP1, serin 83.0 2.2 7.4E-05 32.2 5.4 39 91-129 131-169 (170)
210 2dc2_A GOPC, golgi associated 83.0 2.3 7.9E-05 28.8 5.2 44 91-134 55-98 (103)
211 3o46_A Maguk P55 subfamily mem 82.8 2.4 8.3E-05 28.0 5.2 41 91-131 48-88 (93)
212 1kwa_A Hcask/LIN-2 protein; PD 82.8 2.2 7.5E-05 28.1 4.9 41 91-131 45-85 (88)
213 3b76_A E3 ubiquitin-protein li 82.6 1.9 6.5E-05 30.3 4.7 42 91-132 73-114 (118)
214 2iwo_A Multiple PDZ domain pro 82.4 2.9 9.9E-05 29.3 5.7 42 91-132 73-114 (120)
215 2db5_A INAD-like protein; PDZ 82.4 4.3 0.00015 28.5 6.6 42 91-132 74-116 (128)
216 1ueq_A Membrane associated gua 82.2 6.5 0.00022 27.4 7.5 42 91-132 64-107 (123)
217 2d90_A PDZ domain containing p 81.8 6.1 0.00021 26.4 7.0 43 91-133 49-91 (102)
218 1wg6_A Hypothetical protein (r 81.2 3.1 0.00011 29.5 5.5 42 91-132 75-123 (127)
219 2qkv_A Inactivation-NO-after-p 81.2 3.8 0.00013 27.3 5.7 43 91-133 51-93 (96)
220 2la8_A Inactivation-NO-after-p 80.9 4.8 0.00016 27.5 6.2 44 91-134 45-88 (106)
221 2he4_A Na(+)/H(+) exchange reg 80.6 4.1 0.00014 26.6 5.6 42 91-132 47-88 (90)
222 1uhp_A Hypothetical protein KI 80.6 3.6 0.00012 27.9 5.5 42 91-132 61-102 (107)
223 2byg_A Channel associated prot 80.3 3.1 0.00011 29.0 5.2 41 91-131 74-114 (117)
224 2yt7_A Amyloid beta A4 precurs 80.2 4.2 0.00015 27.3 5.7 41 91-131 57-99 (101)
225 2d92_A INAD-like protein; PDZ 79.7 3.6 0.00012 28.0 5.3 41 91-131 64-105 (108)
226 1ujd_A KIAA0559 protein; PDZ d 78.6 3.7 0.00013 28.5 5.1 42 91-132 69-110 (117)
227 1wf8_A Neurabin-I; PDZ domain, 78.5 4.5 0.00015 27.4 5.4 43 91-133 60-102 (107)
228 4amh_A Disks large homolog 1; 78.3 4.6 0.00016 27.5 5.4 42 91-132 52-93 (106)
229 1ujv_A Membrane associated gua 78.1 6.2 0.00021 26.3 6.0 41 91-131 49-91 (96)
230 3qe1_A Sorting nexin-27, G pro 78.0 5.8 0.0002 26.7 5.9 42 91-132 62-103 (107)
231 2qg1_A Multiple PDZ domain pro 78.0 5.9 0.0002 25.8 5.8 41 91-131 49-89 (92)
232 2awx_A Synapse associated prot 77.9 4.6 0.00016 27.3 5.3 44 91-134 53-96 (105)
233 1n7t_A 99-MER peptide of densi 77.8 6 0.0002 26.5 5.9 41 91-131 61-101 (103)
234 2kv8_A RGS12, regulator of G-p 77.8 4.6 0.00016 25.9 5.1 40 91-130 42-81 (83)
235 2edv_A FERM and PDZ domain-con 77.5 4.3 0.00015 27.0 5.0 41 91-131 49-89 (96)
236 1v6b_A Harmonin isoform A1; st 77.5 4.4 0.00015 28.2 5.2 43 90-132 62-108 (118)
237 1wfg_A Regulating synaptic mem 77.4 4.8 0.00017 28.6 5.5 42 91-132 85-128 (131)
238 2f5y_A Regulator of G-protein 77.2 5.7 0.00019 26.0 5.5 44 91-134 43-86 (91)
239 2eei_A PDZ domain-containing p 76.4 9.4 0.00032 25.6 6.6 44 91-134 51-94 (106)
240 3l4f_D SH3 and multiple ankyri 76.1 5.8 0.0002 28.2 5.7 41 91-131 84-124 (132)
241 3axa_A Afadin, nectin-3, prote 76.0 7 0.00024 26.3 5.9 43 91-133 58-100 (106)
242 1wha_A KIAA0147 protein, scrib 76.0 5 0.00017 27.1 5.1 42 91-132 58-99 (105)
243 2dm8_A INAD-like protein; PDZ 75.8 12 0.0004 25.6 7.1 44 91-134 63-106 (116)
244 1d5g_A Human phosphatase HPTP1 75.5 7.4 0.00025 25.6 5.8 40 91-130 53-92 (96)
245 1n7e_A AMPA receptor interacti 75.3 7.5 0.00026 25.7 5.8 42 91-132 50-91 (97)
246 2jik_A Synaptojanin-2 binding 75.1 6.9 0.00023 26.0 5.6 41 91-131 57-97 (101)
247 2fne_A Multiple PDZ domain pro 74.9 6.3 0.00022 27.4 5.5 41 91-131 73-113 (117)
248 2ehr_A INAD-like protein; PDZ 74.8 6.3 0.00022 27.1 5.5 42 91-132 70-111 (117)
249 1va8_A Maguk P55 subfamily mem 74.8 6.4 0.00022 27.0 5.5 41 91-131 68-108 (113)
250 3khf_A Microtubule-associated 74.7 8.1 0.00028 25.6 5.8 42 90-131 52-93 (99)
251 2vsp_A PDZ domain-containing p 74.6 6.4 0.00022 25.7 5.2 42 91-132 46-87 (91)
252 1mfg_A ERB-B2 interacting prot 74.5 6.5 0.00022 25.8 5.2 40 91-130 53-92 (95)
253 1qav_A Alpha-1 syntrophin (res 74.4 5.6 0.00019 25.9 4.8 39 91-129 50-88 (90)
254 2dlu_A INAD-like protein; PDZ 74.3 6.8 0.00023 26.6 5.5 42 91-132 58-99 (111)
255 2v90_A PDZ domain-containing p 74.1 8.2 0.00028 25.4 5.7 43 91-133 49-91 (96)
256 2kpk_A Membrane-associated gua 74.1 20 0.00067 25.1 8.1 41 91-131 63-105 (129)
257 3hpk_A Protein interacting wit 73.9 6.6 0.00022 27.4 5.4 40 91-130 65-104 (125)
258 1i16_A Interleukin 16, LCF; cy 73.8 3.6 0.00012 29.2 4.0 41 91-131 77-118 (130)
259 2uzc_A Human pdlim5, PDZ and L 73.4 9.1 0.00031 24.6 5.7 40 91-130 46-85 (88)
260 2dkr_A LIN-7 homolog B; LIN-7B 73.2 8.2 0.00028 25.1 5.5 40 91-130 50-89 (93)
261 4e34_A Golgi-associated PDZ an 73.2 6.4 0.00022 25.3 4.9 38 91-128 48-85 (87)
262 1uep_A Membrane associated gua 73.1 5.1 0.00018 26.9 4.5 42 91-132 54-97 (103)
263 2ego_A General receptor for ph 73.0 9 0.00031 25.2 5.7 40 91-130 56-95 (96)
264 3r68_A Na(+)/H(+) exchange reg 72.9 6.9 0.00024 25.6 5.1 43 91-133 48-90 (95)
265 2cs5_A Tyrosine-protein phosph 72.8 6.2 0.00021 27.2 5.0 41 91-131 62-106 (119)
266 2vwr_A Ligand of NUMB protein 72.5 9.1 0.00031 25.1 5.6 42 91-132 49-90 (95)
267 2eno_A Synaptojanin-2-binding 72.4 7 0.00024 27.1 5.2 42 91-132 67-108 (120)
268 1nf3_C PAR-6B; semi-CRIB motif 72.3 7.3 0.00025 27.4 5.3 41 91-131 85-125 (128)
269 3ngh_A PDZ domain-containing p 72.1 8.5 0.00029 25.8 5.5 42 91-132 45-86 (106)
270 1wfv_A Membrane associated gua 72.1 7.4 0.00025 25.9 5.1 42 91-132 56-97 (103)
271 2djt_A Unnamed protein product 72.0 7.8 0.00027 25.9 5.3 41 91-131 58-98 (104)
272 2fe5_A Presynaptic protein SAP 72.0 8.9 0.0003 25.0 5.5 40 91-130 53-92 (94)
273 2i1n_A Discs, large homolog 3; 71.9 8.7 0.0003 25.6 5.5 42 91-132 54-95 (102)
274 2o2t_A Multiple PDZ domain pro 71.7 11 0.00036 25.9 6.0 42 91-132 69-111 (117)
275 1y7n_A Amyloid beta A4 precurs 71.4 7.8 0.00027 25.5 5.0 39 91-129 50-88 (90)
276 1v5q_A GRIP1 homolog, glutamat 71.3 11 0.00039 26.1 6.1 42 91-132 65-108 (122)
277 1whd_A RGS3, regulator of G-pr 71.2 11 0.00037 25.1 5.8 41 91-131 55-95 (100)
278 2opg_A Multiple PDZ domain pro 71.1 11 0.00038 24.8 5.8 42 91-132 50-91 (98)
279 2daz_A INAD-like protein; PDZ 70.9 7.5 0.00026 27.1 5.1 42 91-132 71-112 (124)
280 2r4h_A Membrane-associated gua 70.9 9.3 0.00032 26.1 5.5 40 91-130 69-108 (112)
281 2i04_A Membrane-associated gua 70.9 10 0.00034 24.2 5.4 39 91-129 45-85 (85)
282 1ihj_A INAD; intermolecular di 70.8 10 0.00034 25.0 5.5 40 91-130 57-96 (98)
283 2jil_A GRIP1 protein, glutamat 70.6 11 0.00036 24.8 5.6 42 91-132 52-93 (97)
284 1uew_A Membrane associated gua 70.5 8.6 0.00029 26.3 5.3 42 91-132 63-104 (114)
285 3nfk_A Tyrosine-protein phosph 70.4 6.8 0.00023 26.4 4.6 39 91-129 64-106 (107)
286 1q3o_A Shank1; PDZ, GKAP, pept 70.3 9.4 0.00032 25.8 5.4 41 91-131 64-104 (109)
287 1wi4_A Synip, syntaxin binding 70.2 7.7 0.00026 26.5 4.9 41 91-131 61-105 (109)
288 2q3g_A PDZ and LIM domain prot 69.7 8.8 0.0003 24.8 5.0 40 91-130 46-85 (89)
289 1z87_A Alpha-1-syntrophin; pro 69.5 27 0.00092 28.1 8.7 43 91-133 123-165 (263)
290 1rgw_A ZAsp protein; PDZ, cyph 69.4 8.2 0.00028 24.6 4.7 40 91-130 44-83 (85)
291 1um1_A KIAA1849 protein, RSGI 69.1 11 0.00036 25.5 5.5 42 91-132 56-97 (110)
292 1m5z_A GRIP, AMPA receptor int 69.0 12 0.00039 24.3 5.5 40 91-130 51-90 (91)
293 1ufx_A KIAA1526 protein; PDZ d 68.4 5.3 0.00018 27.1 3.7 41 91-131 52-97 (103)
294 2pa1_A PDZ and LIM domain prot 68.0 12 0.00043 23.9 5.4 41 91-131 45-85 (87)
295 2g5m_B Neurabin-2; spinophilin 67.5 8.7 0.0003 26.1 4.7 43 91-133 55-97 (113)
296 2fcf_A Multiple PDZ domain pro 67.4 12 0.00042 24.8 5.5 42 91-132 59-100 (103)
297 1q7x_A PDZ2B domain of PTP-BAS 67.1 8.5 0.00029 26.0 4.6 42 91-132 62-103 (108)
298 2edz_A PDZ domain-containing p 66.5 12 0.00042 25.5 5.4 41 91-131 57-97 (114)
299 2jre_A C60-1 PDZ domain peptid 66.4 11 0.00039 25.3 5.1 41 91-131 64-104 (108)
300 2ejy_A 55 kDa erythrocyte memb 65.8 8.2 0.00028 26.0 4.2 40 91-130 56-95 (97)
301 2vsv_A Rhophilin-2; scaffold p 65.6 13 0.00045 25.5 5.4 43 91-133 63-106 (109)
302 2rcz_A Tight junction protein 65.5 15 0.00052 22.8 5.4 39 91-129 41-79 (81)
303 1v5l_A PDZ and LIM domain 3; a 65.5 20 0.00067 23.9 6.2 44 91-134 48-91 (103)
304 2iwq_A Multiple PDZ domain pro 65.3 14 0.0005 25.7 5.7 42 91-132 79-120 (123)
305 2koj_A Partitioning defective 65.3 16 0.00056 24.5 5.8 42 91-132 59-102 (111)
306 2iwn_A Multiple PDZ domain pro 65.3 14 0.00049 24.0 5.4 40 91-130 53-92 (97)
307 2eeg_A PDZ and LIM domain prot 64.9 16 0.00055 23.8 5.6 40 91-130 51-90 (94)
308 2yuy_A RHO GTPase activating p 64.8 7.1 0.00024 27.3 3.9 41 91-131 80-120 (126)
309 1wf7_A Enigma homologue protei 64.4 28 0.00096 23.0 7.0 42 91-132 48-89 (103)
310 2e7k_A Maguk P55 subfamily mem 64.4 10 0.00036 24.8 4.5 39 91-130 49-87 (91)
311 1g9o_A NHE-RF; PDZ domain, com 64.2 19 0.00065 23.2 5.8 41 91-131 46-86 (91)
312 1vb7_A PDZ and LIM domain 2; P 63.9 15 0.00051 24.0 5.2 41 91-131 49-89 (94)
313 2qbw_A PDZ-fibronectin fusion 63.8 13 0.00043 27.8 5.4 39 91-129 42-80 (195)
314 2q9v_A Membrane-associated gua 63.5 9 0.00031 24.8 4.0 40 91-130 47-88 (90)
315 2dmz_A INAD-like protein; PDZ 63.3 10 0.00035 26.5 4.6 42 91-132 66-107 (129)
316 1wi2_A Riken cDNA 2700099C19; 62.9 18 0.00061 24.2 5.6 39 91-130 60-98 (104)
317 3i4w_A Disks large homolog 4; 62.4 14 0.00047 24.5 4.9 40 91-130 55-94 (104)
318 2pkt_A PDZ and LIM domain prot 62.2 17 0.00059 23.4 5.3 41 91-131 46-86 (91)
319 3dor_A Protein CT_858, CPAF; m 61.7 13 0.00045 33.5 5.8 31 44-79 96-126 (583)
320 3cyy_A Tight junction protein 61.5 19 0.00065 23.1 5.4 41 91-131 43-83 (92)
321 2kom_A Partitioning defective 61.1 20 0.00068 24.8 5.7 40 91-130 78-119 (121)
322 1uju_A Scribble; PDZ domain, c 60.9 4.8 0.00017 27.4 2.3 43 91-133 64-106 (111)
323 1um7_A Synapse-associated prot 60.2 18 0.00063 24.3 5.3 41 91-131 59-99 (113)
324 2dls_A PDZ-rhogef, RHO guanine 59.2 24 0.00083 22.9 5.6 41 91-132 48-88 (93)
325 3bpu_A Membrane-associated gua 59.1 22 0.00077 22.7 5.4 40 91-130 44-85 (88)
326 1uit_A Human discs large 5 pro 56.7 30 0.001 23.5 6.0 44 91-134 61-104 (117)
327 1x5q_A LAP4 protein; PDZ domai 56.5 23 0.0008 23.7 5.3 41 91-131 65-105 (110)
328 2gzv_A PRKCA-binding protein; 56.4 25 0.00084 24.1 5.5 40 91-130 70-109 (114)
329 2w4f_A Protein LAP4; structura 55.5 28 0.00097 22.5 5.5 41 91-131 53-93 (97)
330 2edp_A Fragment, shroom family 54.3 15 0.00051 24.4 3.9 47 84-131 47-94 (100)
331 1vae_A Rhophilin 2, rhophilin, 53.9 32 0.0011 23.5 5.7 43 91-133 55-98 (111)
332 1wif_A RSGI RUH-020, riken cDN 53.0 20 0.0007 25.3 4.6 40 91-130 69-110 (126)
333 2eeh_A PDZ domain-containing p 50.9 30 0.001 22.7 5.1 40 91-131 55-94 (100)
334 2h2b_A Tight junction protein 50.6 34 0.0012 22.7 5.3 42 91-132 57-98 (107)
335 1tp5_A Presynaptic density pro 50.4 28 0.00095 23.7 4.9 41 91-131 58-98 (119)
336 2z17_A Pleckstrin homology SEC 50.1 16 0.00054 24.4 3.5 37 91-127 67-103 (104)
337 3sfj_A TAX1-binding protein 3; 49.5 35 0.0012 22.5 5.2 39 91-129 64-103 (104)
338 3k1r_A Harmonin; protein-prote 45.8 26 0.00088 26.3 4.5 41 91-132 129-169 (192)
339 2yub_A LIMK-2, LIM domain kina 45.4 59 0.002 22.3 6.0 42 91-132 65-106 (118)
340 3tsv_A Tight junction protein 43.3 39 0.0014 23.4 4.9 42 91-132 70-113 (124)
341 2krg_A Na(+)/H(+) exchange reg 42.2 44 0.0015 25.8 5.4 40 91-130 52-92 (216)
342 2vz5_A TAX1-binding protein 3; 38.7 50 0.0017 23.4 4.9 42 91-132 83-125 (139)
343 1x6d_A Interleukin-16; PDZ dom 35.9 64 0.0022 21.8 4.9 40 91-130 62-102 (119)
344 2jxo_A Ezrin-radixin-moesin-bi 34.2 70 0.0024 20.6 4.8 40 91-130 52-92 (98)
345 3qik_A Phosphatidylinositol 3, 33.9 81 0.0028 21.4 5.0 40 91-130 58-100 (101)
346 3shw_A Tight junction protein 32.5 56 0.0019 28.6 5.0 41 91-131 42-84 (468)
347 1qau_A Neuronal nitric oxide s 32.4 93 0.0032 20.6 5.3 42 91-132 46-88 (112)
348 2d8i_A T-cell lymphoma invasio 32.3 89 0.0031 21.3 5.2 40 91-132 63-102 (114)
349 3v0r_A Major allergen ALT A 1; 31.8 50 0.0017 23.7 3.7 33 2-34 5-41 (133)
350 2lob_A Golgi-associated PDZ an 35.3 12 0.00039 25.8 0.0 38 91-128 73-110 (112)
351 2xvc_A ESCRT-III, SSO0910; cel 28.4 32 0.0011 21.1 1.9 40 80-119 10-49 (59)
352 3bbo_O Ribosomal protein L16; 28.1 57 0.0019 23.5 3.6 34 54-92 88-121 (135)
353 1x5n_A Harmonin; PDZ domain, u 27.8 76 0.0026 21.1 4.2 39 91-130 60-98 (114)
354 3m3h_A OPRT, oprtase, orotate 25.9 57 0.002 25.6 3.5 37 60-96 131-167 (234)
355 3tsz_A Tight junction protein 24.9 94 0.0032 26.2 5.0 42 91-132 50-93 (391)
356 3kzd_A TIAM-1, T-lymphoma inva 24.3 91 0.0031 20.7 3.9 37 90-128 53-89 (94)
357 3dez_A OPRT, oprtase, orotate 23.8 65 0.0022 25.4 3.5 37 60-96 143-179 (243)
358 3cam_A Cold-shock domain famil 22.1 1.5E+02 0.005 18.2 4.6 45 18-71 6-50 (67)
359 3i2z_B RNA chaperone, negative 21.3 1.6E+02 0.0053 18.3 4.5 44 17-71 9-54 (71)
360 2kjd_A Sodium/hydrogen exchang 20.5 1.9E+02 0.0066 19.4 5.2 41 91-131 52-93 (128)
361 2j3t_D Trafficking protein par 20.4 69 0.0024 25.1 2.9 23 57-80 52-74 (219)
362 2ftc_I Mitochondrial ribosomal 20.0 74 0.0025 22.3 2.8 35 56-94 77-111 (118)
No 1
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.74 E-value=3.3e-17 Score=116.80 Aligned_cols=91 Identities=65% Similarity=0.988 Sum_probs=82.5
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
+|+.++|.|.|+..+|||++.++.+.+......+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 2 ~~~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 2 MFKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp CEEEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred CceEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 68999999999989999999998886554557799999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
.+..+.|...|
T Consensus 82 ~g~~v~l~v~R 92 (102)
T 2i1n_A 82 AGPVVRLVVRR 92 (102)
T ss_dssp SCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 88888886544
No 2
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.73 E-value=9.2e-17 Score=126.41 Aligned_cols=121 Identities=65% Similarity=0.935 Sum_probs=105.6
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+|+.++|+|.|+..+|||+|.++.+.+...+..++||..|.++|+|+++|+|+.||+|++|||..+.++++.+++.+++
T Consensus 2 ~~~~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 2 GSMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp -CEEEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCcEEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46889999999999999999999988765555779999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEE--------------------------------------------------------------------eeee
Q psy10226 91 RAGNVVTL--------------------------------------------------------------------LGEK 102 (208)
Q Consensus 91 ~~~~~v~l--------------------------------------------------------------------~~~~ 102 (208)
..+..+.| +|++
T Consensus 82 ~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~ 161 (196)
T 3gsl_A 82 EAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSV 161 (196)
T ss_dssp TSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred hCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCC
Confidence 98887766 6666
Q ss_pred eCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 103 NLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
.+....+.++..+++..+..+.|.+.+..
T Consensus 162 ~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 190 (196)
T 3gsl_A 162 GLEDVMHEDAVAALKNTYDVVYLKVAKPS 190 (196)
T ss_dssp ECSSCBHHHHHHHHHSCCEEEEEEEEEES
T ss_pred cCCCCCHHHHHHHHHcCCCeEEEEEeCCC
Confidence 77777788888888887778888887654
No 3
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.72 E-value=8.1e-17 Score=113.24 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=69.9
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|+|.|..++|||+|.++. ...+||++|.+||+|+++|+|++||+|++|||+++.+++|.+++++|+++
T Consensus 4 g~~k~V~l~K~~~~LG~tI~~~g-------~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~ 76 (95)
T 3gge_A 4 GIEKEVNVYKSEDSLGLTITDNG-------VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKEL 76 (95)
T ss_dssp EEEEEEEEECCSSCCCEEEECSS-------SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CeEEEEEEEECCCCceEEEEcCC-------CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhC
Confidence 46789999998899999999631 34689999999999999999999999999999999999999999999986
Q ss_pred CC--EEEE
Q psy10226 93 GN--VVTL 98 (208)
Q Consensus 93 ~~--~v~l 98 (208)
.. .++|
T Consensus 77 ~~g~~~~L 84 (95)
T 3gge_A 77 KKEELFTM 84 (95)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 43 5555
No 4
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.72 E-value=7e-17 Score=113.27 Aligned_cols=88 Identities=50% Similarity=0.735 Sum_probs=79.2
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
|+.++|+|.|+..+|||++.++.+.+......+++|..|.++|||+++|+|++||+|++|||..+.++++.+++.+++..
T Consensus 2 ~~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 2 MTIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CCEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 67899999999889999999988765444567999999999999999999999999999999999999999999999988
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..+.|..
T Consensus 82 ~~~v~l~v 89 (94)
T 2fe5_A 82 SDMVYLKV 89 (94)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 88777754
No 5
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=1.2e-16 Score=117.02 Aligned_cols=89 Identities=52% Similarity=0.732 Sum_probs=78.6
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.+.|.|.|+..+|||+|.++.+.+....+.+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+|+.++
T Consensus 24 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 103 (117)
T 2byg_A 24 TVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTS 103 (117)
T ss_dssp EEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45688899988899999999887654445678999999999999999999999999999999999999999999999988
Q ss_pred CEEEEeeee
Q psy10226 94 NVVTLLGEK 102 (208)
Q Consensus 94 ~~v~l~~~~ 102 (208)
..+.|.+.+
T Consensus 104 ~~v~l~v~R 112 (117)
T 2byg_A 104 EVVYLKVGK 112 (117)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 888885543
No 6
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.70 E-value=8.4e-17 Score=110.61 Aligned_cols=74 Identities=26% Similarity=0.424 Sum_probs=67.0
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
+.+.|+|+|+ .++|||++.++ +|..+.+|+||+++| |+.||+|++|||+++.+++|++++++||++
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g------------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~ 70 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG------------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS 70 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT------------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred ceEEEEEEECCCCCeEEEEECC------------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 4678999998 45799999872 489999999999999 999999999999999999999999999999
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..|+|..
T Consensus 71 g~~V~L~v 78 (82)
T 1r6j_A 71 GTVVTITI 78 (82)
T ss_dssp CSEEEEEE
T ss_pred CCEEEEEE
Confidence 99988843
No 7
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.70 E-value=1.4e-16 Score=114.23 Aligned_cols=89 Identities=51% Similarity=0.755 Sum_probs=78.0
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.++|.|.|+..+|||+|.++.+.+....+.+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46789999988899999999887654444679999999999999999999999999999999999999999999999888
Q ss_pred CEEEEeeee
Q psy10226 94 NVVTLLGEK 102 (208)
Q Consensus 94 ~~v~l~~~~ 102 (208)
..+.|.+.+
T Consensus 83 ~~v~l~v~R 91 (105)
T 2awx_A 83 DFVYLKVAK 91 (105)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 888775433
No 8
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.69 E-value=1.2e-16 Score=119.01 Aligned_cols=90 Identities=27% Similarity=0.399 Sum_probs=76.8
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+.+.+.|.|.|+..+|||+|.++.+.+. +..++||..|.+|++|+++|.|++||+|++|||+++.+++|++++++|+
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~--~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~ 103 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLH--GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIK 103 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSS--SCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHH
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35678899999988899999999887432 2568999999999999999559999999999999999999999999999
Q ss_pred hCCC-EEEEeeee
Q psy10226 91 RAGN-VVTLLGEK 102 (208)
Q Consensus 91 ~~~~-~v~l~~~~ 102 (208)
.+++ .+.|++.+
T Consensus 104 ~~~~~~v~l~v~r 116 (130)
T 1i16_A 104 ALPDGPVTIVIRR 116 (130)
T ss_dssp TSCSSEEEEEEEE
T ss_pred hCCCceEEEEEEe
Confidence 8855 46665433
No 9
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.69 E-value=2.3e-16 Score=122.83 Aligned_cols=91 Identities=32% Similarity=0.507 Sum_probs=78.4
Q ss_pred CcceEEEEEEeCCCcccEEEec-cCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAG-GTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~g-g~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
+++.+.|.|.|+..+|||+|.+ +.+........++||..|.+||+|+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4677889999988899999999 222222234678999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEeeee
Q psy10226 91 RAGNVVTLLGEK 102 (208)
Q Consensus 91 ~~~~~v~l~~~~ 102 (208)
.++..|.|++.|
T Consensus 158 ~~g~~v~L~V~R 169 (170)
T 3egg_C 158 NTKGRVRFMIGR 169 (170)
T ss_dssp HCCSEEEEEEEE
T ss_pred cCCCEEEEEEEe
Confidence 999999886544
No 10
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=4.1e-16 Score=112.14 Aligned_cols=92 Identities=30% Similarity=0.457 Sum_probs=78.8
Q ss_pred CCCCcceEEEEEEeCCCcccEEEeccCCC---CCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 9 GDSEWEYEEIRLERGGAGLGFSIAGGTDN---PHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~~~~lGf~i~gg~~~---~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
...+++.++|.|.|+..+|||+|.++.+. +......++||..|.++|+|+++|.|++||+|++|||+++.+++|.++
T Consensus 3 ~~~~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~ 82 (107)
T 1uhp_A 3 SGSSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQA 82 (107)
T ss_dssp CCCSSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHH
T ss_pred CCcCcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 35678999999999988999999998753 222235689999999999999993399999999999999999999999
Q ss_pred HHHHHhCCCEEEEee
Q psy10226 86 VEALKRAGNVVTLLG 100 (208)
Q Consensus 86 v~~l~~~~~~v~l~~ 100 (208)
+.+++..+..+.|.+
T Consensus 83 ~~~~~~~~~~v~l~v 97 (107)
T 1uhp_A 83 VEAFKTAKEPIVVQV 97 (107)
T ss_dssp HHHHHHCCSSEEEEE
T ss_pred HHHHHcCCCcEEEEE
Confidence 999998888777744
No 11
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.68 E-value=3.8e-16 Score=114.59 Aligned_cols=88 Identities=30% Similarity=0.568 Sum_probs=76.4
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.+.|.|.|+ ..+|||+|.++.+.. ....++||..|.++|+|+++|+|++||+|++|||.++.+++|.+++.+|++
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~--~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 100 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAGGASHR--EWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR 100 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEECSCST--TCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS
T ss_pred CCcEEEEEEeCCCCccCEEEecCCCCC--CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34567889887 688999999987542 236789999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
++..+.|.+.+
T Consensus 101 ~~~~v~L~v~R 111 (118)
T 3b76_A 101 TSSSIVLKALE 111 (118)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99888885443
No 12
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.68 E-value=6.1e-16 Score=109.94 Aligned_cols=90 Identities=42% Similarity=0.654 Sum_probs=78.9
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...++|.|.|+..+|||++.++.+.+......+++|..|.++|+|+++|+|+.||+|++|||..+.++++.+++.+++..
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45778999998899999999988764333457999999999999999999999999999999999999999999999988
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|.+.+
T Consensus 86 g~~v~l~v~R 95 (101)
T 2jik_A 86 GYAVSLRVQH 95 (101)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8888886544
No 13
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=3.4e-16 Score=112.16 Aligned_cols=96 Identities=35% Similarity=0.547 Sum_probs=82.0
Q ss_pred CCCCCcceEEEEEEeCCCcccEEEeccCCCCCC-CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHH
Q psy10226 8 GGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHI-GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAV 86 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~-~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av 86 (208)
|+....+.++|.|.|+..+|||+|.++.+.+.+ ..+.+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++
T Consensus 1 ~s~~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 80 (105)
T 1wha_A 1 GSSGSSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAV 80 (105)
T ss_dssp CCCCCCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCCCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345667888999999888999999998874222 2357899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEeeeee
Q psy10226 87 EALKRAGNVVTLLGEKN 103 (208)
Q Consensus 87 ~~l~~~~~~v~l~~~~~ 103 (208)
.+|+..+..+.|.+.+.
T Consensus 81 ~~l~~~g~~v~l~v~R~ 97 (105)
T 1wha_A 81 SLLTAASPTIALLLERE 97 (105)
T ss_dssp HHHTSCCSCEEEEEEEC
T ss_pred HHHHcCCCeEEEEEEEC
Confidence 99998888888865553
No 14
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=9.3e-16 Score=112.49 Aligned_cols=96 Identities=42% Similarity=0.622 Sum_probs=81.8
Q ss_pred cccCCCC-CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHH
Q psy10226 5 KVNGGDS-EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHS 83 (208)
Q Consensus 5 ~~~~~~~-~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~ 83 (208)
..|+... .++.+.|.|.|+..+|||+|.++.+.+......+++|..|.++++|+++|+|++||+|++|||+.+.+++|.
T Consensus 7 ~~~g~~~~~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 86 (120)
T 2eno_A 7 GMNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ 86 (120)
T ss_dssp CCSSCCCEEEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHH
T ss_pred CcCCCCCCCCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 4555544 467779999998899999999988754333467999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEee
Q psy10226 84 AAVEALKRAGNVVTLLG 100 (208)
Q Consensus 84 ~av~~l~~~~~~v~l~~ 100 (208)
+++.+++..+..+.|.+
T Consensus 87 ~~~~~~~~~g~~v~l~v 103 (120)
T 2eno_A 87 DAVDLFRNAGYAVSLRV 103 (120)
T ss_dssp HHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHcCCCeEEEEE
Confidence 99999998887777743
No 15
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=6.2e-16 Score=111.16 Aligned_cols=92 Identities=35% Similarity=0.556 Sum_probs=80.1
Q ss_pred CCCCcceEEEEEEeCCCcccEEEec---cCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 9 GDSEWEYEEIRLERGGAGLGFSIAG---GTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~~~~lGf~i~g---g~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
...+++.+.|.|.|+..+|||+|.+ +.+.. ....++||..|.++|+|+++|+|++||+|++|||+.+.++++.++
T Consensus 4 ~~~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~--~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 81 (107)
T 1wf8_A 4 GSSGLELFPVELEKDEDGLGISIIGMGVGADAG--LEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFA 81 (107)
T ss_dssp CCCCEEEEEEEEECBTTBSCEEEEEEEESCCTT--CCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHH
T ss_pred CcCCceEEEEEEEECCCcccEEEEecCCCCCCC--CCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3556888999999988899999998 44432 236789999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+.+++..+..+.|.+.|
T Consensus 82 ~~~~~~~~~~v~l~v~R 98 (107)
T 1wf8_A 82 ATVLRNTKGNVRFVIGR 98 (107)
T ss_dssp HHHHHHCCSEEEEEEEE
T ss_pred HHHHhcCCCeEEEEEEe
Confidence 99999988888886544
No 16
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=4.3e-16 Score=111.30 Aligned_cols=89 Identities=28% Similarity=0.470 Sum_probs=79.1
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+|+.+.|.|.|+..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++++|
T Consensus 5 ~~~~~~~~v~l~~~~~g~G~~i~~g~~~-----~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 79 (103)
T 1uep_A 5 SSGYKELDVHLRRMESGFGFRILGGDEP-----GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLM 79 (103)
T ss_dssp SSSEEEECCEEESSSSSCCEEECCCCST-----TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCCceEEEEEEEeCCCccCEEEeeecCC-----CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678999999999988999999987653 46899999999999999999999999999999999999999999999
Q ss_pred HhC--CCEEEEeeeee
Q psy10226 90 KRA--GNVVTLLGEKN 103 (208)
Q Consensus 90 ~~~--~~~v~l~~~~~ 103 (208)
+.+ +..|.|.+.|.
T Consensus 80 ~~~~~g~~v~l~v~R~ 95 (103)
T 1uep_A 80 HHAARNGQVNLTVRRK 95 (103)
T ss_dssp HHHHHHTEEEEEEEEE
T ss_pred HhCCCCCcEEEEEEeC
Confidence 987 67888865543
No 17
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=112.75 Aligned_cols=89 Identities=29% Similarity=0.286 Sum_probs=75.9
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|.|.|+..+|||+|.++.+. ......++||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|+..
T Consensus 14 ~~~~~v~l~k~~~glG~~i~~~~~~-~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKDCKGLGFSILDYQDP-LDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEECSSCCSEEEEEEECS-SCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEECCCccCEEEeccccc-CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3457899999988999999997662 122367899999999999999999999999999999999999999999999986
Q ss_pred -CCEEEEeeee
Q psy10226 93 -GNVVTLLGEK 102 (208)
Q Consensus 93 -~~~v~l~~~~ 102 (208)
+..+.|++.|
T Consensus 93 ~~~~v~l~v~R 103 (108)
T 2d92_A 93 PPGLVHLGICS 103 (108)
T ss_dssp CSEEEEEEEEC
T ss_pred CCCeEEEEEEc
Confidence 4577775544
No 18
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.66 E-value=9.7e-16 Score=110.77 Aligned_cols=80 Identities=30% Similarity=0.576 Sum_probs=70.6
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
....+.+.|.|.|+ .+|||+|.|+.+... ..++||..|.++|+|+++|+|++||+|++|||+++.+++|++++++|
T Consensus 11 ~~~~~~~~v~l~k~-~glG~~i~gg~~~~~---~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l 86 (109)
T 1wi4_A 11 DRDPAFRVITVTKE-TGLGLKILGGINRNE---GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 86 (109)
T ss_dssp CCCTTEEEEEECCS-SCCCEEEEECSSSSS---CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHH
T ss_pred CCCCcEEEEEEeCC-CccCEEEEeccCCCC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44456788999886 899999999877532 34799999999999999999999999999999999999999999999
Q ss_pred HhCC
Q psy10226 90 KRAG 93 (208)
Q Consensus 90 ~~~~ 93 (208)
+.+.
T Consensus 87 ~~~~ 90 (109)
T 1wi4_A 87 TRAK 90 (109)
T ss_dssp HHSC
T ss_pred Hccc
Confidence 9875
No 19
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.66 E-value=1.7e-15 Score=106.81 Aligned_cols=90 Identities=28% Similarity=0.520 Sum_probs=78.0
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
|+.++|.|.|+..+|||++.++.+... ....+++|..|.++|||+++|+|++||+|++|||+.+.++++.++..+|+..
T Consensus 2 ~~~~~v~l~k~~~~lG~~i~~~~~~~~-~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (97)
T 2jil_A 2 MRTVEVTLHKEGNTFGFVIRGGAHDDR-NKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 80 (97)
T ss_dssp EEEEEEEEECBTTBCSEEEEEECCSCC---CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred ceEEEEEEEeCCCccCEEEeCcccCCC-CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 677899999988899999999875421 2256899999999999999999999999999999999999999999999998
Q ss_pred CCEEEEeeeee
Q psy10226 93 GNVVTLLGEKN 103 (208)
Q Consensus 93 ~~~v~l~~~~~ 103 (208)
+..+.|...|.
T Consensus 81 g~~v~l~v~R~ 91 (97)
T 2jil_A 81 GQEAALLIEYD 91 (97)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 88888865553
No 20
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=4.6e-16 Score=113.77 Aligned_cols=91 Identities=21% Similarity=0.398 Sum_probs=78.6
Q ss_pred CcceEEEEEEeCC-------CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 12 EWEYEEIRLERGG-------AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 12 ~~~~~~v~l~k~~-------~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
.+..++|.|.|.. .+|||+|.++.+.+......++||..|.++|+|+++|+|++||+|++|||+++.+++|.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 4566789999875 789999999887543334568999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEeeee
Q psy10226 85 AVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 85 av~~l~~~~~~v~l~~~~ 102 (208)
++.+|+..+..+.|.+.+
T Consensus 90 ~~~~l~~~~~~v~l~v~R 107 (117)
T 1ujd_A 90 VQSIISQQSGEAEICVRL 107 (117)
T ss_dssp HHHHHSCCSSCEEEEEES
T ss_pred HHHHHhcCCCEEEEEEEE
Confidence 999999988888886544
No 21
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.65 E-value=6.9e-16 Score=107.34 Aligned_cols=83 Identities=34% Similarity=0.531 Sum_probs=73.2
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
++.++|.|.|+..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|++.
T Consensus 1 ~~~~~v~l~~~~~g~G~~~~~g~~~-----~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2q9v_A 1 SMEQDIFLWRKETGFGFRILGGNEP-----GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQA 75 (90)
T ss_dssp CEEEEEEEECBTTBCCEEEEECSST-----TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred CCcEEEEEEECCCccCEEEEccccC-----CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4678899999988999999997653 35799999999999999999999999999999999999999999999987
Q ss_pred CC--EEEEee
Q psy10226 93 GN--VVTLLG 100 (208)
Q Consensus 93 ~~--~v~l~~ 100 (208)
+. .+.|..
T Consensus 76 ~~~~~v~l~v 85 (90)
T 2q9v_A 76 AKQGHVNLTV 85 (90)
T ss_dssp HHHTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 43 777754
No 22
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.65 E-value=1.7e-15 Score=141.42 Aligned_cols=130 Identities=64% Similarity=0.901 Sum_probs=111.8
Q ss_pred cccccCCCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCH
Q psy10226 3 CEKVNGGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPH 82 (208)
Q Consensus 3 ~~~~~~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~ 82 (208)
.+.+|+...+|+.++|.|.|+..+|||+|.||.+.+....+.++||..|.+||+|+++|+|+.||+|++|||+++.+++|
T Consensus 48 s~~~~~~~~~~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 127 (721)
T 2xkx_A 48 PGYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTH 127 (721)
T ss_pred ccccCCCCCCceEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 35678888899999999999888999999999987655567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEE----------------------------------------------------------------
Q psy10226 83 SAAVEALKRAGNVVTL---------------------------------------------------------------- 98 (208)
Q Consensus 83 ~~av~~l~~~~~~v~l---------------------------------------------------------------- 98 (208)
.+++.+|+.++..|.|
T Consensus 128 ~~~~~~l~~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD 207 (721)
T 2xkx_A 128 SAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGD 207 (721)
T ss_pred HHHHHHhhccccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCC
Confidence 9999999876654333
Q ss_pred ----eeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 99 ----LGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 99 ----~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+|++.+.+..+.++..+++..+..+.|.+.+...
T Consensus 208 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 208 KILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 245 (721)
T ss_pred EEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4555667777888889998888889999987654
No 23
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=2.3e-15 Score=110.92 Aligned_cols=88 Identities=30% Similarity=0.562 Sum_probs=76.4
Q ss_pred ccCCCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 6 VNGGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 6 ~~~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
.+.....++.++|.|.|+..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+.+.++++.++
T Consensus 11 ~~~~~~~~~~~~v~l~~~~~glG~~~~~g~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 85 (123)
T 1ueq_A 11 RDASQLKGTFLSTTLKKSNMGFGFTIIGGDEP-----DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADV 85 (123)
T ss_dssp SSSTTCCSEEEEEEEECCTTSCSEEEECCSSS-----SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHH
T ss_pred cCcccCCCcEEEEEEEeCCCceeEEEecccCC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 34455667888999999988999999987653 4579999999999999999999999999999999999999999
Q ss_pred HHHHHh--CCCEEEE
Q psy10226 86 VEALKR--AGNVVTL 98 (208)
Q Consensus 86 v~~l~~--~~~~v~l 98 (208)
+++|++ .+..+.|
T Consensus 86 ~~~l~~~~~g~~v~l 100 (123)
T 1ueq_A 86 VKLFQSVPIGQSVNL 100 (123)
T ss_dssp HHHHHTSCTTCEEEE
T ss_pred HHHHHhCCCCCeEEE
Confidence 999997 3566666
No 24
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.65 E-value=1.9e-15 Score=106.22 Aligned_cols=85 Identities=28% Similarity=0.447 Sum_probs=75.6
Q ss_pred CcceEEEEEEeC--CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 12 EWEYEEIRLERG--GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 12 ~~~~~~v~l~k~--~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
++++++|.|.|. +.+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.++
T Consensus 1 e~~~~~v~l~k~~~~~~lG~~~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (95)
T 2vwr_A 1 SMEILQVALHKRDSGEQLGIKLVRRTD------EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQII 74 (95)
T ss_dssp CEEEEEEEEECSSTTCCCCEEEEECSS------SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEEEEEECCCCCcccEEEEeccC------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 578899999995 4689999998655 45899999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEeeee
Q psy10226 90 KRAGNVVTLLGEK 102 (208)
Q Consensus 90 ~~~~~~v~l~~~~ 102 (208)
+..+..+.|...|
T Consensus 75 ~~~g~~v~l~v~R 87 (95)
T 2vwr_A 75 QASGERVNLTIAR 87 (95)
T ss_dssp HHCCSEEEEEEEE
T ss_pred HcCCCEEEEEEEc
Confidence 9888888886544
No 25
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.65 E-value=8.5e-16 Score=110.46 Aligned_cols=84 Identities=50% Similarity=0.751 Sum_probs=71.8
Q ss_pred EEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEE
Q psy10226 19 RLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTL 98 (208)
Q Consensus 19 ~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l 98 (208)
.+..+..+|||+|.||.+......+.+++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++.+++..+..+.|
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 34445889999999999876555567999999999999999999999999999999999999999999999999888888
Q ss_pred eeee
Q psy10226 99 LGEK 102 (208)
Q Consensus 99 ~~~~ 102 (208)
.+.|
T Consensus 87 ~v~R 90 (106)
T 4amh_A 87 KVAK 90 (106)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6544
No 26
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.64 E-value=1.7e-15 Score=110.61 Aligned_cols=90 Identities=37% Similarity=0.656 Sum_probs=77.5
Q ss_pred CCCCcceEEEEEEeC-CCcccEEEeccCCCCCCC-CCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHH
Q psy10226 9 GDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIG-DDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAV 86 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~-~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av 86 (208)
.+.+|+.++|.|.|+ ..+|||+|.++.+.+... +..+++|..|.++|+|+ +| |++||+|++|||+++.+++|.+++
T Consensus 9 ~~~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~ 86 (117)
T 2csj_A 9 EEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAV 86 (117)
T ss_dssp SCEEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHH
T ss_pred ccccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHH
Confidence 456789999999998 489999999988754321 35689999999999997 77 999999999999999999999999
Q ss_pred HHHHhCCCEEEEee
Q psy10226 87 EALKRAGNVVTLLG 100 (208)
Q Consensus 87 ~~l~~~~~~v~l~~ 100 (208)
.+++..+..+.|.+
T Consensus 87 ~~l~~~~~~v~l~v 100 (117)
T 2csj_A 87 QQLRKSGKIAAIVV 100 (117)
T ss_dssp HHHHHSCSEEEEEE
T ss_pred HHHhcCCCeEEEEE
Confidence 99998888888743
No 27
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.64 E-value=6.5e-16 Score=111.43 Aligned_cols=86 Identities=29% Similarity=0.451 Sum_probs=73.8
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.++|.|.|+ ..+|||+|.++.+. ....++||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~---~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 80 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNE---RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRD 80 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSS---TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCC---CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 46788999985 68899999998653 236799999999999999999999999999999999999999999999997
Q ss_pred C---CCEEEEeee
Q psy10226 92 A---GNVVTLLGE 101 (208)
Q Consensus 92 ~---~~~v~l~~~ 101 (208)
+ +..+.|.+.
T Consensus 81 ~~~~~~~v~l~v~ 93 (108)
T 3cbz_A 81 IVHKPGPIVLTVA 93 (108)
T ss_dssp HHTSSSCEEEEEE
T ss_pred cccCCCeEEEEEE
Confidence 6 345666443
No 28
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.64 E-value=2e-15 Score=105.22 Aligned_cols=80 Identities=31% Similarity=0.419 Sum_probs=72.2
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
|+.++|.|.|+..+|||++.++.+ ..+++|..|.++|||+++| |+.||+|++|||.++.++++.+++.+++..
T Consensus 2 ~~~r~v~l~r~~~g~G~~~~~~~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 1g9o_A 2 MLPRLCCLEKGPNGYGFHLHGEKG------KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA 74 (91)
T ss_dssp CCCEEEEEECBTTBCCEEEEECTT------CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCCcccEEEEecCC------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 678899999998899999998654 4589999999999999999 999999999999999999999999999988
Q ss_pred CCEEEEe
Q psy10226 93 GNVVTLL 99 (208)
Q Consensus 93 ~~~v~l~ 99 (208)
++.+.++
T Consensus 75 ~~~~~~~ 81 (91)
T 1g9o_A 75 LNAVRLL 81 (91)
T ss_dssp SSEEEEE
T ss_pred CCcEEEE
Confidence 7766553
No 29
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.64 E-value=2.6e-15 Score=105.65 Aligned_cols=87 Identities=38% Similarity=0.601 Sum_probs=76.3
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|.|.|+..+|||++.++.+.. ....+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.+++..
T Consensus 4 g~~~~v~l~k~~~~lG~~i~~g~~~~--~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 81 (96)
T 1d5g_A 4 GDIFEVELAKNDNSLGISVTGGVNTS--VRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 81 (96)
T ss_dssp TCEEEEEEECSSSSCCEEEECCSSSC--SSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCEEEEEEEeCCCCCCEEEECCCCCC--CCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35778999999899999999977642 1246899999999999999999999999999999999999999999999988
Q ss_pred CCEEEEeee
Q psy10226 93 GNVVTLLGE 101 (208)
Q Consensus 93 ~~~v~l~~~ 101 (208)
+..+.|...
T Consensus 82 g~~v~l~v~ 90 (96)
T 1d5g_A 82 GQVVHLLLE 90 (96)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 888887543
No 30
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.64 E-value=1.7e-15 Score=106.06 Aligned_cols=82 Identities=24% Similarity=0.370 Sum_probs=72.7
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
-..+.|.|.|++.+|||++.++. ...+++|..|.++|+|+++|+|+.||+|++|||..+.+++|++++.+|+.+
T Consensus 3 ~~~r~v~l~k~~~~lG~~i~~~~------~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (93)
T 3o46_A 3 DSVKIIRLVKNREPLGATIKKDE------QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS 76 (93)
T ss_dssp -CCEEEEEEESSSCCCEEEEECT------TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred ccEEEEEEEeCCCCccEEEEecC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34678999998889999999852 146899999999999999999999999999999999999999999999998
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
++.+.|.+
T Consensus 77 ~~~v~l~v 84 (93)
T 3o46_A 77 QGAITFKI 84 (93)
T ss_dssp CEEEEEEE
T ss_pred CCeEEEEE
Confidence 88777754
No 31
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.64 E-value=6.1e-15 Score=117.29 Aligned_cols=119 Identities=24% Similarity=0.327 Sum_probs=104.1
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCC--CCHHHHHHHHH
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVD--VPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~--~t~~~av~~l~ 90 (208)
.+...|+|.|+..+|||+|.+|.+... ..+++|..|.++|+|+++|+|+.||+|++|||+.+.+ ++|.+++.+++
T Consensus 17 ~~~~~v~~~~~~~~lG~~i~~g~~~~~---~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 93 (206)
T 3r0h_A 17 NKKILIELKVEKKPMGVIVCGGKNNHV---TTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH 93 (206)
T ss_dssp TSCEEEEEECTTSCCCEEEECCSSSSC---CSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCcCEEEecccCCCC---CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH
Confidence 356689999999999999999887532 2589999999999999999999999999999999999 99999999999
Q ss_pred hCCCE-EEE-------------------------------------------------------------eeeeeCCCCC
Q psy10226 91 RAGNV-VTL-------------------------------------------------------------LGEKNLENVT 108 (208)
Q Consensus 91 ~~~~~-v~l-------------------------------------------------------------~~~~~~~~~~ 108 (208)
..+.. +.| +|++.+....
T Consensus 94 ~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~ 173 (206)
T 3r0h_A 94 TTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLP 173 (206)
T ss_dssp SCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCC
T ss_pred hcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 87766 655 7888999989
Q ss_pred HHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 109 HEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 109 ~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.++..+++.....+.|.+.|+.+..
T Consensus 174 ~~~~~~~l~~~~~~v~L~V~R~~~~~ 199 (206)
T 3r0h_A 174 FQVCYALFKGANGKVSMEVTRPKPTL 199 (206)
T ss_dssp HHHHHHHHHTCCSEEEEEEEEECCCC
T ss_pred HHHHHHHHHcCCCeEEEEEEeCCCCC
Confidence 99999999999999999999875544
No 32
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.64 E-value=2.4e-15 Score=104.98 Aligned_cols=85 Identities=34% Similarity=0.489 Sum_probs=74.3
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.|+.++|.|.|. ..+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||..+.++++.++..+++
T Consensus 2 ~~~~~~v~l~k~~~~~lG~~~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (92)
T 2qg1_A 2 MSDTLTIGLQKKPGKGLGLSIVGKRN------DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLK 75 (92)
T ss_dssp --CEEEEEEECCTTSCCSEEEECCSS------SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCcccEEEEeccC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 467889999996 6889999998654 458999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEeeee
Q psy10226 91 RAGNVVTLLGEK 102 (208)
Q Consensus 91 ~~~~~v~l~~~~ 102 (208)
..+..+.|...|
T Consensus 76 ~~~~~v~l~v~R 87 (92)
T 2qg1_A 76 CSLGTVTLEVGR 87 (92)
T ss_dssp HCCSEEEEEEEC
T ss_pred cCCCeEEEEEEc
Confidence 888888885443
No 33
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.64 E-value=6.7e-15 Score=105.59 Aligned_cols=93 Identities=38% Similarity=0.667 Sum_probs=79.7
Q ss_pred CCCCCcceEEEEEEeC-CCcccEEEeccCCCCCC-CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 8 GGDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHI-GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~-~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
|+..+|+.++|.|.|+ +.+|||++.++.+.+.. ....+++|..|.++|+|+ +| |++||+|++|||+.+.++++.++
T Consensus 1 gs~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~ 78 (107)
T 2h2b_A 1 GSHMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFA 78 (107)
T ss_dssp CCCCCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHH
Confidence 5678899999999997 68999999998775322 135689999999999999 88 99999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+..++..+..+.|...|
T Consensus 79 ~~~~~~~g~~v~l~v~R 95 (107)
T 2h2b_A 79 VQQLRKSGKNAKITIRR 95 (107)
T ss_dssp HHHHHTCCSEEEEEEEE
T ss_pred HHHhhCCCCEEEEEEEE
Confidence 98888888888875443
No 34
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.63 E-value=4.1e-15 Score=111.07 Aligned_cols=93 Identities=25% Similarity=0.400 Sum_probs=77.9
Q ss_pred CCCCCcceEEEEEEeC-CCcccEEEeccCCCC-------CCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCC
Q psy10226 8 GGDSEWEYEEIRLERG-GAGLGFSIAGGTDNP-------HIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVD 79 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~-------~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~ 79 (208)
.+....+.+.|+|.|. ..+|||+|.++.+.. ......+++|..|.+||+|+++| |+.||+|++|||..+.+
T Consensus 21 ~s~~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~ 99 (132)
T 3l4f_D 21 GSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVK 99 (132)
T ss_dssp SCCCCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTT
T ss_pred CCCcCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 4455567779999995 688999999987632 11123479999999999999999 99999999999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEeee
Q psy10226 80 VPHSAAVEALKRAGNVVTLLGE 101 (208)
Q Consensus 80 ~t~~~av~~l~~~~~~v~l~~~ 101 (208)
++|.+++.+|++++..+.|.+.
T Consensus 100 ~~~~~~~~~l~~~g~~v~l~v~ 121 (132)
T 3l4f_D 100 VGHRQVVNMIRQGGNTLMVKVV 121 (132)
T ss_dssp SCHHHHHHHHHHTTTEEEEEEE
T ss_pred CCHHHHHHHHHcCCCEEEEEEE
Confidence 9999999999999998888543
No 35
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.63 E-value=2.7e-15 Score=111.33 Aligned_cols=99 Identities=35% Similarity=0.534 Sum_probs=82.7
Q ss_pred ccccccCCCCCcceEEEEEEe-CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCC
Q psy10226 2 SCEKVNGGDSEWEYEEIRLER-GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDV 80 (208)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~l~k-~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~ 80 (208)
||..-.....+++.+.|.|.| +..+|||++.++.+........+++|..|.++|+|+++|+|++||+|++|||+.+.++
T Consensus 3 s~~~~~~~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~ 82 (129)
T 2dmz_A 3 SGSSGGSDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGF 82 (129)
T ss_dssp CCCCCCCSSCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTC
T ss_pred CCcCCCCCCCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 444444556789999999976 5788999999987654323457899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCEEEEee
Q psy10226 81 PHSAAVEALKRAGNVVTLLG 100 (208)
Q Consensus 81 t~~~av~~l~~~~~~v~l~~ 100 (208)
++.+++.+|+..+..+.|.+
T Consensus 83 ~~~~~~~~l~~~~~~v~l~v 102 (129)
T 2dmz_A 83 ANHDVVEVLRNAGQVVHLTL 102 (129)
T ss_dssp CHHHHHHHHHHCCSSEEEEE
T ss_pred CHHHHHHHHHcCCCeEEEEE
Confidence 99999999998777777743
No 36
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=1.2e-15 Score=109.25 Aligned_cols=74 Identities=30% Similarity=0.448 Sum_probs=66.1
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.|.|.|+..+|||+|.++.+.. ...+||..|.++++|+++|+|++||+|++|||+++.+++|++++.+|+++
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~----~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTR----QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSS----CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred eEEEEEEcCCCcCCeEEECCCCCC----CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 567889888899999999987742 23359999999999999999999999999999999999999999999974
No 37
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.63 E-value=1.2e-15 Score=110.64 Aligned_cols=90 Identities=33% Similarity=0.541 Sum_probs=77.5
Q ss_pred CCcceEEEEEEeCCCcccEEEec---cCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAG---GTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~g---g~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
++++.+.|.|.|+..+|||++.+ +.+.. ....+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.
T Consensus 1 g~~~~~~v~l~k~~~glG~~l~~~~~~~~~~--~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 78 (113)
T 2g5m_B 1 GHMELFPVELEKDSEGLGISIIGMGAGADMG--LEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAAS 78 (113)
T ss_dssp CCCEEEEEECCCCSSCCCCEEEEEECCCCSS--SCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHH
T ss_pred CCeEEEEEEEEeCCCCCCEEEEecCCCCcCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35788999999998999999998 44431 23579999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeee
Q psy10226 88 ALKRAGNVVTLLGEK 102 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~ 102 (208)
+++..+..+.|...|
T Consensus 79 ~~~~~g~~v~l~v~R 93 (113)
T 2g5m_B 79 VLRNTKGRVRFMIGR 93 (113)
T ss_dssp HHHHSCSSCEEEEEE
T ss_pred HHhcCCCeEEEEEEe
Confidence 999888877775433
No 38
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.63 E-value=2.5e-15 Score=107.71 Aligned_cols=89 Identities=31% Similarity=0.479 Sum_probs=75.3
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+.+.++|.| |+..+|||+|.++.+.. ....+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.++
T Consensus 7 ~~~~~~~~v~l-~~~~glG~~i~~~~~~~--~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~ 83 (106)
T 3axa_A 7 HKEPEIITVTL-KKQNGMGLSIVAAKGAG--QDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELM 83 (106)
T ss_dssp ---CCEEEEEE-ECSSSCSEEEEEEECSS--CSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCceEEEEEE-CCCCccCEEEEeecCCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44567788888 88899999999876532 2356899999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEeee
Q psy10226 90 KRAGNVVTLLGE 101 (208)
Q Consensus 90 ~~~~~~v~l~~~ 101 (208)
+..+..+.|...
T Consensus 84 ~~~g~~v~l~v~ 95 (106)
T 3axa_A 84 TRTSSVVTLEVA 95 (106)
T ss_dssp HTCCSEEEEEEE
T ss_pred HcCCCeEEEEEE
Confidence 988888888543
No 39
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.63 E-value=3.8e-15 Score=106.21 Aligned_cols=87 Identities=38% Similarity=0.611 Sum_probs=77.3
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
....+.+.|.|.|+..+|||++.++.+ ..+++|..|.++|+|+++|+|+.||+|++|||..+.++++.+++.++
T Consensus 7 ~~~~~~~~v~l~k~~~glG~~~~~~~~------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (104)
T 3i4w_A 7 DIPREPRRIVIHRGSTGLGFNIVGGEX------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 80 (104)
T ss_dssp CCCSSCEEEEEECBTTBTSEEEEECC-------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCccEEEEEEeCCCccCEEEECCCC------CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 445678899999988899999998654 34899999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEeeee
Q psy10226 90 KRAGNVVTLLGEK 102 (208)
Q Consensus 90 ~~~~~~v~l~~~~ 102 (208)
+..+..+.|...+
T Consensus 81 ~~~~~~v~l~v~r 93 (104)
T 3i4w_A 81 KNAGQTVTIIAQY 93 (104)
T ss_dssp HTSCSEEEEEEEE
T ss_pred HcCCCeEEEEEEE
Confidence 9999988886554
No 40
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.62 E-value=5.7e-15 Score=109.03 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=78.2
Q ss_pred CCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 11 SEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 11 ~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+..++|.|.|. ..+|||++.++.+. ..+++|..|.+||+|+++|+|+.||+|++|||.++.+++|.+++.+|
T Consensus 16 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~-----~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 90 (125)
T 3hpk_A 16 IPTVPGKVTLQKDAQNLIGISIGGGAQY-----CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 90 (125)
T ss_dssp CCEEEEEEEEECCTTSCCCEEEEECSSC-----CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcCCCeEEEEEeCCCCCcCEEEeccCCC-----CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4467778999996 67899999998763 46899999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEeeeee
Q psy10226 90 KRAGNVVTLLGEKN 103 (208)
Q Consensus 90 ~~~~~~v~l~~~~~ 103 (208)
++.++.+.|...+.
T Consensus 91 ~~~~~~v~l~v~r~ 104 (125)
T 3hpk_A 91 QEVKGEVTIHYNKL 104 (125)
T ss_dssp HHSCSEEEEEEEEE
T ss_pred HcCCCeEEEEEEEC
Confidence 99999888876553
No 41
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.62 E-value=3.2e-15 Score=108.42 Aligned_cols=85 Identities=32% Similarity=0.631 Sum_probs=74.8
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+++.++|.|.|+..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++
T Consensus 21 ~~~~~~~v~l~~~~~glG~~l~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 95 (112)
T 2r4h_A 21 QSMDFYTVELERGAKGFGFSLRGGREY-----NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIK 95 (112)
T ss_dssp --CCEEEEEEECBTTBTSEEEEECGGG-----TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCccCEEEeccccC-----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 346778999999888999999987653 458999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEee
Q psy10226 91 RAGNVVTLLG 100 (208)
Q Consensus 91 ~~~~~v~l~~ 100 (208)
..+..+.|.+
T Consensus 96 ~~g~~v~l~v 105 (112)
T 2r4h_A 96 NGGRRVRLFL 105 (112)
T ss_dssp TTTTEEEEEE
T ss_pred cCCCeEEEEE
Confidence 8888887754
No 42
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=8.6e-16 Score=112.44 Aligned_cols=88 Identities=44% Similarity=0.645 Sum_probs=76.3
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
..+.++|.|.|+..+|||+|.++.+.+. +..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 100 (117)
T 2fne_A 23 MPQCKSITLERGPDGLGFSIVGGYGSPH--GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKR 100 (117)
T ss_dssp CCEEEEEEECCBTTBTSEEEEEEEEETT--EEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCccEEEEEEeCCCcccEEEecccCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3556789999988899999999765421 24589999999999999999999999999999999999999999999998
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
.++.+.|.+.
T Consensus 101 ~~~~v~l~v~ 110 (117)
T 2fne_A 101 TKGTVTLMVL 110 (117)
T ss_dssp CCSSEEEEEE
T ss_pred CCCeEEEEEE
Confidence 8887777543
No 43
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.62 E-value=2.5e-15 Score=103.79 Aligned_cols=81 Identities=32% Similarity=0.500 Sum_probs=71.7
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccc-cCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAAS-DGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~-~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
+.+.|.|.|+ ..+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||.++.+++|.+++.++++
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~-----~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 75 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQ 75 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CEEEEEEEECCCCcccEEEEccCCC-----CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3578999996 67899999987653 45799999999999999 57 99999999999999999999999999999
Q ss_pred CCCEEEEee
Q psy10226 92 AGNVVTLLG 100 (208)
Q Consensus 92 ~~~~v~l~~ 100 (208)
++..+.|..
T Consensus 76 ~~~~v~l~v 84 (87)
T 4e34_A 76 QRGEIEFEV 84 (87)
T ss_dssp CCSEEEEEE
T ss_pred CCCeEEEEE
Confidence 988888753
No 44
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.62 E-value=1.2e-15 Score=112.15 Aligned_cols=90 Identities=29% Similarity=0.478 Sum_probs=72.4
Q ss_pred CCcceEEEEEEeCC-CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGG-AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 11 ~~~~~~~v~l~k~~-~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
...+.+.|.|.|+. .+|||+|.++.+.+. ...++||..|.++|+|+++|.|++||+|++|||.++.+++|.+++.+|
T Consensus 21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~--~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPL--GDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ----CEEEEEEC----CCCEEEEEEEEETT--EEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCcEEEEEEcCCCCCCCEEEecccCCCC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44667899999974 699999999775321 245899999999999999944999999999999999999999999999
Q ss_pred HhCCCEEEEeeee
Q psy10226 90 KRAGNVVTLLGEK 102 (208)
Q Consensus 90 ~~~~~~v~l~~~~ 102 (208)
+..++.+.|.+.+
T Consensus 99 ~~~~~~v~l~v~r 111 (120)
T 2iwo_A 99 KNASGSIEMQVVA 111 (120)
T ss_dssp HHCCSEEEEEEEC
T ss_pred HcCCCeEEEEEEE
Confidence 9999888885543
No 45
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.62 E-value=5.8e-15 Score=106.08 Aligned_cols=93 Identities=41% Similarity=0.605 Sum_probs=79.3
Q ss_pred CCCcceEEEEEE--eCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 10 DSEWEYEEIRLE--RGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 10 ~~~~~~~~v~l~--k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
..+++.+.|.|. ++..+|||++.++.+........+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.
T Consensus 8 ~~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 87 (108)
T 2jre_A 8 ASGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVE 87 (108)
T ss_dssp SSSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHH
T ss_pred ccCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 466888899995 457889999999876543334668999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeee
Q psy10226 88 ALKRAGNVVTLLGEK 102 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~ 102 (208)
+|+..+..+.|.+.+
T Consensus 88 ~l~~~g~~v~l~v~R 102 (108)
T 2jre_A 88 VLRNAGNPVRLLLIR 102 (108)
T ss_dssp HHHHHCSEEEEEEEE
T ss_pred HHHcCCCeEEEEEEe
Confidence 999888888875543
No 46
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=4.2e-15 Score=103.86 Aligned_cols=85 Identities=38% Similarity=0.590 Sum_probs=74.3
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...++|+|.|+..+|||++.++.+. ..+++|..|.++|+|+++|.|++||+|++|||+.+.++++.+++.+++..
T Consensus 4 ~~~r~v~l~k~~~glG~~l~~~~~~-----~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (93)
T 2dkr_A 4 GSSGVVELPKTDEGLGFNIMGGKEQ-----NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA 78 (93)
T ss_dssp SCSCEEEEECCTTCCCEEEECSSSS-----SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CCCEEEEEEeCCCCccEEEecccCC-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567899999999999999987653 45899999999999999955999999999999999999999999999988
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|...+
T Consensus 79 ~~~v~l~v~r 88 (93)
T 2dkr_A 79 QGSVKLVVRS 88 (93)
T ss_dssp CSEEEEEECC
T ss_pred CCcEEEEEEe
Confidence 8887775443
No 47
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.62 E-value=3.4e-15 Score=103.89 Aligned_cols=83 Identities=27% Similarity=0.402 Sum_probs=73.6
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
+.+.+.|.|.|+..+|||++.++.+ ..+++|..|.++|+|+++| |++||+|++|||..+.+++|.++..+|+.
T Consensus 2 ~~~~r~v~l~k~~~g~G~~~~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2he4_A 2 MLRPRLCHLRKGPQGYGFNLHSDKS------RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKA 74 (90)
T ss_dssp TTCCEEEEEECBTTBCCEEEEECSS------SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred CCCcEEEEEEECCCCccEEEEccCC------CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4567899999998899999998554 3589999999999999999 99999999999999999999999999998
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
.+..+.|...
T Consensus 75 ~~~~v~l~v~ 84 (90)
T 2he4_A 75 REDEARLLVV 84 (90)
T ss_dssp SSSEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 8888877543
No 48
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=1.6e-15 Score=111.07 Aligned_cols=91 Identities=23% Similarity=0.352 Sum_probs=76.8
Q ss_pred ccccccCCCCCcceEEEEEEeCC-CcccEEEeccCCCCCCCCCCcEEEEEECCCCccccc--CCCCCCCEEEEECCeecC
Q psy10226 2 SCEKVNGGDSEWEYEEIRLERGG-AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASD--GRLQVNDVIHQVNHVTVV 78 (208)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~l~k~~-~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~--G~L~~gD~Il~Vng~~l~ 78 (208)
|+...++...+.+.++|.|.|+. .+|||++.++.+. ..+++|..|.++|+|+++ | |++||+|++|||..+.
T Consensus 3 ~~~~~~~~~~~~~~~~v~l~k~~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~ 76 (119)
T 2cs5_A 3 SGSSGNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQ-----KMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIA 76 (119)
T ss_dssp SCCCCCCCCCSSCCEEEEECCCSSSCCSEEEEEEGGG-----TEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTT
T ss_pred cccccCCCcCCCCeEEEEEEeCCCCCcCEEEecccCC-----CCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECC
Confidence 55666776677778899999974 5699999997663 457999999999999999 6 9999999999999999
Q ss_pred CCCHHHHHHHHHhCCC----EEEE
Q psy10226 79 DVPHSAAVEALKRAGN----VVTL 98 (208)
Q Consensus 79 ~~t~~~av~~l~~~~~----~v~l 98 (208)
+++|.+++.+++..+. .+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~l 100 (119)
T 2cs5_A 77 EHTHDQVVLFIKASCERHSGELML 100 (119)
T ss_dssp SSCHHHHHHHHHHHHHCCSSCEEE
T ss_pred CCCHHHHHHHHHhccccCCCEEEE
Confidence 9999999999987643 5555
No 49
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.62 E-value=2.6e-15 Score=107.27 Aligned_cols=84 Identities=31% Similarity=0.437 Sum_probs=72.9
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCccccc-CCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASD-GRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~-G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
...+.|.|.|. ..+|||+|.++.+. ..+++|..|.++|+|+++ | |++||+|++|||.++.++++.+++.+|+
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~-----~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 81 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 81 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHH
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCC-----CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34568888886 67899999997663 458999999999999996 6 9999999999999999999999999999
Q ss_pred hCCCEEEEeeee
Q psy10226 91 RAGNVVTLLGEK 102 (208)
Q Consensus 91 ~~~~~v~l~~~~ 102 (208)
.+++.+.|...+
T Consensus 82 ~~~~~v~l~v~~ 93 (103)
T 2dc2_A 82 QQRGEIEFEVVY 93 (103)
T ss_dssp HCCSEEEEEEEE
T ss_pred hCCCcEEEEEEe
Confidence 998888886544
No 50
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=5.6e-15 Score=107.79 Aligned_cols=92 Identities=28% Similarity=0.371 Sum_probs=77.5
Q ss_pred CCcceEEEEEEeC-CCcccEEEeccCCCCC----CCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 11 SEWEYEEIRLERG-GAGLGFSIAGGTDNPH----IGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 11 ~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~----~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
...+.++|.|.|+ ..+|||+|.++.+... .....+++|..|.++|+|+++|+|++||+|++|||+++.+++|.++
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 91 (117)
T 2ehr_A 12 HWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEA 91 (117)
T ss_dssp CBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHH
T ss_pred cCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3445678999997 6889999999876421 1124689999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+.+|+..+..+.|.+.+
T Consensus 92 ~~~~~~~g~~v~l~v~r 108 (117)
T 2ehr_A 92 VEAIKNAGNPVVFIVQS 108 (117)
T ss_dssp HHHHHTSCSSEEEEECC
T ss_pred HHHHHcCCCeEEEEEEE
Confidence 99999988888875433
No 51
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=5.5e-15 Score=109.01 Aligned_cols=87 Identities=32% Similarity=0.507 Sum_probs=77.0
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
..+.+.|.|.|+..+|||+|.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||+.+.+++|.+++.+++.
T Consensus 23 ~~~~~~v~l~k~~~glG~~l~~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 98 (124)
T 2daz_A 23 PGELHIIELEKDKNGLGLSLAGNKDRS----RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKT 98 (124)
T ss_dssp SSEEEEEEEECCSSCCCEEEECBSSTT----SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHH
T ss_pred CCceEEEEEEeCCCccCEEEeccCCCC----cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456779999999889999999977642 4689999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
.+..+.|.+.+
T Consensus 99 ~~~~v~l~v~R 109 (124)
T 2daz_A 99 APSKVKLVFIR 109 (124)
T ss_dssp SCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 88888885443
No 52
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=7.5e-15 Score=105.91 Aligned_cols=90 Identities=32% Similarity=0.524 Sum_probs=78.7
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
...+.++|.|.|+..+|||++.++.+.+. ...+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 5 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 5 SSGYVFTVELERGPSGLGMGLIDGMHTHL--GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp SCCCEEEEEEECCTTCCCEEEEETTTSTT--CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred CCCcEEEEEEEECCCccCEEEeCCcCCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34567889999988899999999876532 3568999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEeeee
Q psy10226 91 RAGNVVTLLGEK 102 (208)
Q Consensus 91 ~~~~~v~l~~~~ 102 (208)
..+..+.|.+.|
T Consensus 83 ~~~~~v~l~v~R 94 (110)
T 1um1_A 83 HGGKKMRFLVAK 94 (110)
T ss_dssp TCCSEEEEEEEC
T ss_pred cCCCeEEEEEEe
Confidence 988888886544
No 53
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.61 E-value=6.9e-15 Score=106.25 Aligned_cols=80 Identities=35% Similarity=0.651 Sum_probs=70.9
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.+.|.|.|+..+|||.+.++.+ .+++|..|.++|+|+++|+|+.||+|++|||+.+.++++.+++.+|+..
T Consensus 14 ~~~~~v~l~~~~~~lG~~l~~~~~-------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (111)
T 2dlu_A 14 GHVEEVELINDGSGLGFGIVGGKT-------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC 86 (111)
T ss_dssp SEEEEEEEECCSSCCCEEEECCSS-------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCccCEEEeccCC-------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 346789999988899999997543 4799999999999999999999999999999999999999999999887
Q ss_pred CCEEEEe
Q psy10226 93 GNVVTLL 99 (208)
Q Consensus 93 ~~~v~l~ 99 (208)
+..+.|.
T Consensus 87 g~~v~l~ 93 (111)
T 2dlu_A 87 GNSVRML 93 (111)
T ss_dssp CSEEEEE
T ss_pred CCeEEEE
Confidence 7777774
No 54
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.61 E-value=4.5e-15 Score=103.24 Aligned_cols=84 Identities=35% Similarity=0.505 Sum_probs=73.4
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.++|.|.|. ..+|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||..+.++++.+++.+++.
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~-----~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~ 77 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGREN-----KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK 77 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCC-----CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35678999995 78899999987653 4589999999999999993399999999999999999999999999999
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
.+..+.|...
T Consensus 78 ~~~~v~l~v~ 87 (90)
T 1qav_A 78 TGKEVVLEVK 87 (90)
T ss_dssp CCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 8888888543
No 55
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.61 E-value=7.1e-15 Score=101.07 Aligned_cols=80 Identities=31% Similarity=0.539 Sum_probs=70.6
Q ss_pred EEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC--C
Q psy10226 16 EEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA--G 93 (208)
Q Consensus 16 ~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~--~ 93 (208)
.+|+|.|+..+|||++.++.+. ..+++|..|.++|+|+++|+|+.||+|++|||..+.++++.++.++|+.. +
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~-----~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 76 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEP-----DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 76 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCST-----TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTT
T ss_pred EEEEEEECCCCCCEEEEcccCC-----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 4788999888999999986542 46799999999999999999999999999999999999999999999986 6
Q ss_pred CEEEEee
Q psy10226 94 NVVTLLG 100 (208)
Q Consensus 94 ~~v~l~~ 100 (208)
..+.|..
T Consensus 77 ~~v~l~v 83 (85)
T 2i04_A 77 ASVDLEL 83 (85)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 7777643
No 56
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.61 E-value=3.2e-15 Score=110.85 Aligned_cols=84 Identities=30% Similarity=0.514 Sum_probs=73.4
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecC-CCCHHHHHHHHHh
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVV-DVPHSAAVEALKR 91 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~-~~t~~~av~~l~~ 91 (208)
+.+.|.|.|+ ..+|||+|.++.+.. ....++||..|.++|+|+++|+|++||+|++|||+++. +++|.+++.+|+.
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~--~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQN--LGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSS--SSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCccCEEEecccCCC--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4568999997 478999999987642 22458999999999999999999999999999999998 9999999999998
Q ss_pred CCCEEEEe
Q psy10226 92 AGNVVTLL 99 (208)
Q Consensus 92 ~~~~v~l~ 99 (208)
.+..+.|.
T Consensus 103 ~~~~v~l~ 110 (128)
T 2db5_A 103 TTGSLRLI 110 (128)
T ss_dssp CCSEEEEE
T ss_pred CCCeEEEE
Confidence 88877774
No 57
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=3.9e-15 Score=107.06 Aligned_cols=88 Identities=39% Similarity=0.611 Sum_probs=77.1
Q ss_pred cceEEEEEEeCCCcccEEEe-----ccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 13 WEYEEIRLERGGAGLGFSIA-----GGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~-----gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
.+.++|.|.|+..+|||+|. +|.+... ...+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.
T Consensus 8 ~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 85 (108)
T 1q7x_A 8 GDIFEVELAKNDNSLGISVTVLFDKGGVNTSV--RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVE 85 (108)
T ss_dssp SSEEEEEEESSSCSCCEEESSSSSSBCBCTTS--SSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHH
T ss_pred CcEEEEEEEECCCCccEEEEEeccCCCccccC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45778999999899999999 7776421 2568999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeee
Q psy10226 88 ALKRAGNVVTLLGEK 102 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~ 102 (208)
+++..+..+.|...+
T Consensus 86 ~~~~~g~~v~l~v~R 100 (108)
T 1q7x_A 86 TLRNTGQVVHLLLEK 100 (108)
T ss_dssp HHHHTTSEEEEEEEC
T ss_pred HHHcCCCeEEEEEEe
Confidence 999988888885543
No 58
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.60 E-value=8e-15 Score=104.82 Aligned_cols=91 Identities=34% Similarity=0.506 Sum_probs=77.8
Q ss_pred ccccCCCCCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCH
Q psy10226 4 EKVNGGDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPH 82 (208)
Q Consensus 4 ~~~~~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~ 82 (208)
+..+.....+..++|.|.|. ..+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||+.+.++++
T Consensus 5 S~~~~~~~~~~~~~v~l~k~~~~~lG~~~~~~~~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 78 (104)
T 1wi2_A 5 SSGNNELTQFLPRIVTLKKPPGAQLGFNIRGGKAS-----QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEH 78 (104)
T ss_dssp CCSCCCCCSSCCEEEEECCCTTCCCSEEEECCSSS-----CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCH
T ss_pred cccccCcCCCCCEEEEEEeCCCCCccEEEEcccCC-----CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 34455666788999999997 47899999987653 4589999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEeee
Q psy10226 83 SAAVEALKRAGNVVTLLGE 101 (208)
Q Consensus 83 ~~av~~l~~~~~~v~l~~~ 101 (208)
.+++++|+. +..+.|.+.
T Consensus 79 ~~~~~~l~~-~~~v~l~v~ 96 (104)
T 1wi2_A 79 SKAVEILKT-AREISMRVR 96 (104)
T ss_dssp HHHHHHHHH-SSSEEEEEE
T ss_pred HHHHHHHhC-CCEEEEEEE
Confidence 999999998 666777543
No 59
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.60 E-value=1.7e-15 Score=112.39 Aligned_cols=89 Identities=37% Similarity=0.565 Sum_probs=72.9
Q ss_pred cceEEEEEE-eCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLE-RGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~-k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
...++|.|. ++..+|||+|.++.+.. .....++||..|.++|+|+++|+|++||+|++|||+++.+++|.+++.+|+.
T Consensus 24 ~~~~~v~l~k~~~~glG~~i~~~~~~~-~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 102 (127)
T 1wg6_A 24 QLTLEIPLNDSGSAGLGVSLKGNKSRE-TGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRR 102 (127)
T ss_dssp EEEEEEECSSSTTTCCCCEEEEEEETT-TTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHH
T ss_pred ceEEEEEEeeCCCCccCeEEecccCCC-CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 334566666 45889999999876531 1124589999999999999999999999999999999999999999999997
Q ss_pred C-------CCEEEEeeee
Q psy10226 92 A-------GNVVTLLGEK 102 (208)
Q Consensus 92 ~-------~~~v~l~~~~ 102 (208)
+ +..|.|.+.|
T Consensus 103 ~~~~~g~~~~~v~l~v~R 120 (127)
T 1wg6_A 103 SMSMEGNIRGMIQLVILR 120 (127)
T ss_dssp HHHHHHHHTCEEEEEEEE
T ss_pred hhccccCCCCEEEEEEEe
Confidence 6 6788876544
No 60
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.60 E-value=1.1e-14 Score=102.64 Aligned_cols=83 Identities=31% Similarity=0.426 Sum_probs=72.6
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|.|.|...+|||++.++.+. ..+++|..|.++++|+++|+|+.||+|++|||+.+.++++.+++.+|+..
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~-----~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 78 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEP-----FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA 78 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSST-----TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4577899988878899999986542 35899999999999999999999999999999999999999999999977
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..+.|..
T Consensus 79 g~~v~l~v 86 (97)
T 1n7e_A 79 GETVTLKI 86 (97)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 77777744
No 61
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=1.9e-14 Score=104.56 Aligned_cols=91 Identities=30% Similarity=0.509 Sum_probs=76.4
Q ss_pred CCCCCcceEEEEEEeC-CCcccEEEeccCCCCCCCC--CCcEEEEEECCCCcccc-cCCCCCCCEEEEECCeecCCCCHH
Q psy10226 8 GGDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGD--DTSIYITKLIPGGAAAS-DGRLQVNDVIHQVNHVTVVDVPHS 83 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~--~~~i~I~~v~~gg~A~~-~G~L~~gD~Il~Vng~~l~~~t~~ 83 (208)
+...+++.++|.|.|. ..+|||+|.++.+...... ..+++|..|.++|+|++ +| |++||+|++|||..+.+++|+
T Consensus 4 g~~~~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~ 82 (114)
T 1uew_A 4 GSSGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHA 82 (114)
T ss_dssp CCSCCCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHH
T ss_pred CCCCcccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHH
Confidence 5567788999999985 6789999999876432111 23679999999999999 88 999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEe
Q psy10226 84 AAVEALKRAGNVVTLL 99 (208)
Q Consensus 84 ~av~~l~~~~~~v~l~ 99 (208)
+++++|+..+..+.|.
T Consensus 83 ~~~~~l~~~g~~v~l~ 98 (114)
T 1uew_A 83 DIVKLIKDAGLSVTLR 98 (114)
T ss_dssp HHHHHHHHTTTEEEEE
T ss_pred HHHHHHHcCCCeEEEE
Confidence 9999999877777774
No 62
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=101.60 Aligned_cols=85 Identities=33% Similarity=0.488 Sum_probs=74.8
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.++|.|.|+..+|||++.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+++..+
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~----~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTL----LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTST----TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEecCCCCC----CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4678999999889999999876642 258999999999999999999999999999999999999999999999888
Q ss_pred CEEEEeeee
Q psy10226 94 NVVTLLGEK 102 (208)
Q Consensus 94 ~~v~l~~~~ 102 (208)
..+.|...+
T Consensus 80 ~~v~l~v~R 88 (98)
T 2opg_A 80 QRVRLTLYR 88 (98)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEc
Confidence 888775443
No 63
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.60 E-value=6.1e-15 Score=109.59 Aligned_cols=84 Identities=30% Similarity=0.558 Sum_probs=73.0
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
+...+.++|.|.|+..+|||++.++.+. ..+++|..|.++|+|+++|+|+.||+|++|||+.+.+++|.+++++|
T Consensus 14 ~~~g~~~~v~l~~~~~g~G~~i~g~~~~-----~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 88 (129)
T 2kpk_A 14 ELKGKFIHTKLRKSSRGFGFTVVGGDEP-----DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 88 (129)
T ss_dssp TSCSEEEEEEEEECSSCCSEEEEEEEET-----TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred hcCCcEEEEEEEECCCcccEEEeCccCC-----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3345667899999988999999986542 45799999999999999999999999999999999999999999999
Q ss_pred HhC--CCEEEE
Q psy10226 90 KRA--GNVVTL 98 (208)
Q Consensus 90 ~~~--~~~v~l 98 (208)
+.. +..+.|
T Consensus 89 ~~~~~g~~v~l 99 (129)
T 2kpk_A 89 QSIPIGASVDL 99 (129)
T ss_dssp HHSCTTEEEEE
T ss_pred HhCCCCCeEEE
Confidence 987 556666
No 64
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.59 E-value=1.2e-14 Score=108.41 Aligned_cols=90 Identities=21% Similarity=0.287 Sum_probs=74.4
Q ss_pred CCcceEEEEEEeC----------CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCC
Q psy10226 11 SEWEYEEIRLERG----------GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDV 80 (208)
Q Consensus 11 ~~~~~~~v~l~k~----------~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~ 80 (208)
.+..+..+.|.|. ..+|||+|.+|.+.. .+..++||..|.++|+|+++|+|++||+|++|||+.+.++
T Consensus 24 ~~~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~--~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~ 101 (131)
T 1wfg_A 24 GDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTE--SGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGA 101 (131)
T ss_dssp SSEEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECS--SSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTC
T ss_pred CCceeeEEEEeccceeEEEecCCCCCCCEEEecCccCC--CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 3444556777765 567999999987653 2356899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCC--CEEEEeeee
Q psy10226 81 PHSAAVEALKRAG--NVVTLLGEK 102 (208)
Q Consensus 81 t~~~av~~l~~~~--~~v~l~~~~ 102 (208)
+|++++.+|+.++ ..+.|++.|
T Consensus 102 ~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 102 TFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp CHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEEEEEc
Confidence 9999999999864 777775443
No 65
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.59 E-value=1.1e-14 Score=103.89 Aligned_cols=92 Identities=36% Similarity=0.532 Sum_probs=77.5
Q ss_pred CCCCCcceEEEEEEeCCCcccEEEeccCC---CCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 8 GGDSEWEYEEIRLERGGAGLGFSIAGGTD---NPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~~~~lGf~i~gg~~---~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
+.+..++.+.|.+.|+. +|||++.++.+ .+......+++|..|.++|+|++ | |++||+|++|||..+.++++.+
T Consensus 5 ~~~~~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~ 81 (103)
T 1n7t_A 5 GHELAKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQ 81 (103)
T ss_dssp CSSSSCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHH
T ss_pred ccCcccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHH
Confidence 34556778889998864 89999999764 33323467999999999999999 8 9999999999999999999999
Q ss_pred HHHHHHhCCCEEEEeeee
Q psy10226 85 AVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 85 av~~l~~~~~~v~l~~~~ 102 (208)
++.+++..+..+.|...|
T Consensus 82 ~~~~~~~~g~~v~l~v~R 99 (103)
T 1n7t_A 82 AVSLLKTFQNTVELIIVR 99 (103)
T ss_dssp HHHHHHHCCSEEEEEEEC
T ss_pred HHHHhhcCCCeEEEEEEe
Confidence 999999888888886544
No 66
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=3.1e-15 Score=108.20 Aligned_cols=91 Identities=35% Similarity=0.583 Sum_probs=77.1
Q ss_pred cceEEEEEEeC-CCcccEEEeccCC----CCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTD----NPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~----~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
...++|.|.|+ +.+|||+|.++.+ .+......+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.
T Consensus 8 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 8 PGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp CSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred CccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34567889897 5899999999874 222234678999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeeee
Q psy10226 88 ALKRAGNVVTLLGEKN 103 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~~ 103 (208)
+|+..+..+.|.+.+.
T Consensus 88 ~l~~~g~~v~l~v~r~ 103 (111)
T 1uju_A 88 LLRSVGDTLTVLVCDG 103 (111)
T ss_dssp HHSSCSSEEEECCCCC
T ss_pred HHHcCCCeEEEEEEEC
Confidence 9999888888865443
No 67
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.59 E-value=1e-14 Score=100.94 Aligned_cols=81 Identities=23% Similarity=0.409 Sum_probs=71.1
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
..+.|.| ++..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||..+.++++.++..+++..+
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~-----~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 75 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDF-----NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCT 75 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred cEEEEEE-cCCCcccEEEECcCCC-----CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4667888 6678899999987764 4589999999999999999 9999999999999999999999999999888
Q ss_pred CEEEEeee
Q psy10226 94 NVVTLLGE 101 (208)
Q Consensus 94 ~~v~l~~~ 101 (208)
..+.|...
T Consensus 76 ~~v~l~v~ 83 (88)
T 2uzc_A 76 GSLNMTLQ 83 (88)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 88877543
No 68
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=1.1e-14 Score=106.42 Aligned_cols=86 Identities=17% Similarity=0.245 Sum_probs=74.0
Q ss_pred CCCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 10 DSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 10 ~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
......+.|.|.|. +.+|||++.++.+. ...++||..|.++|+|+++|+|++||+|++|||+.+.+++|++++++
T Consensus 11 ~~~~~~~~v~l~k~~~~~lG~~i~~~~~~----~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~ 86 (117)
T 1v62_A 11 ANASGPLMVEIVKTPGSALGISLTTTSLR----NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKL 86 (117)
T ss_dssp CCSSSSEEEEEECCTTCCCCCEEEEECCS----SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHH
T ss_pred cCCCCcEEEEEEcCCCCcccEEEEccCCC----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 33456788999997 57899999987653 13459999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEe
Q psy10226 89 LKRAGNVVTLL 99 (208)
Q Consensus 89 l~~~~~~v~l~ 99 (208)
|++.+..+.|.
T Consensus 87 l~~~g~~v~l~ 97 (117)
T 1v62_A 87 LASISEKVRLE 97 (117)
T ss_dssp HHSCSSEEEEE
T ss_pred HHhCCCeEEEE
Confidence 99877777773
No 69
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.59 E-value=3.2e-14 Score=99.88 Aligned_cols=85 Identities=38% Similarity=0.560 Sum_probs=71.7
Q ss_pred eEEEEEEeCCCcccEEEeccCC---CCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTD---NPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~---~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.++|.+.|+. +|||+|.++.+ .+......+++|..|.++|+|++ | |++||+|++|||..+.++++.+++.+++.
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 3467777754 89999999774 33333467999999999999999 8 99999999999999999999999999998
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
.+..+.|.+.|
T Consensus 81 ~~~~v~l~v~R 91 (95)
T 1mfg_A 81 FQNTVELIIVR 91 (95)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 88888886544
No 70
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.59 E-value=1.6e-14 Score=101.75 Aligned_cols=88 Identities=25% Similarity=0.410 Sum_probs=71.3
Q ss_pred CcceEEEEEEeC-CCcccEEEec-cCCCC-CCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAG-GTDNP-HIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~g-g~~~~-~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
+.+.++|.|.|+ ..+|||+|.+ +.... ......+++|..|.++|||+++| |++||+|++|||..+.++++.++..+
T Consensus 2 ~~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 80 (96)
T 2ego_A 2 SQQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDI 80 (96)
T ss_dssp CCCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 345788999997 4789999997 21100 01124589999999999999999 99999999999999999999999999
Q ss_pred HHhCCCEEEEee
Q psy10226 89 LKRAGNVVTLLG 100 (208)
Q Consensus 89 l~~~~~~v~l~~ 100 (208)
|+..++.+.|.+
T Consensus 81 l~~~~~~v~l~v 92 (96)
T 2ego_A 81 IKASGNVLRLET 92 (96)
T ss_dssp HHHTTTEEEEEE
T ss_pred HHhCCCeEEEEE
Confidence 998888777743
No 71
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=1.4e-14 Score=101.04 Aligned_cols=80 Identities=26% Similarity=0.426 Sum_probs=71.1
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...++|.|.|+..+|||.+.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+++.+|+..
T Consensus 2 ~~~r~v~l~~~~~g~G~~l~~---------~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 71 (91)
T 2f5y_A 2 MRYRQITIPRGKDGFGFTICC---------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 71 (91)
T ss_dssp CEEEEEEEECBTTBTSEEEEC---------SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEEeCCCCccEEEec---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356789999998899999987 3468999999999999999 999999999999999999999999999988
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|...+
T Consensus 72 ~~~v~l~v~R 81 (91)
T 2f5y_A 72 PSEIILLVWR 81 (91)
T ss_dssp SSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8877775544
No 72
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.58 E-value=1.3e-14 Score=106.09 Aligned_cols=91 Identities=37% Similarity=0.602 Sum_probs=80.1
Q ss_pred ccCCCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 6 VNGGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 6 ~~~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
++.....++.++|.|.|+..+|||++.++.+ ..+++|..|.++|+|+++|+|++||+|++|||..+.++++.++
T Consensus 6 ~~~~~~~~~~~~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 79 (119)
T 1tp5_A 6 LGEEDIPREPRRIVIHRGSTGLGFNIVGGED------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQA 79 (119)
T ss_dssp GGGSCCCCSCEEEEEECTTSCCCEEEEECGG------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHH
T ss_pred cCCCCCCCccEEEEEEECCCCccEEEecCCC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4445667899999999988889999998553 3589999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+.+++..+..+.|...+
T Consensus 80 ~~~~~~~~~~v~l~v~r 96 (119)
T 1tp5_A 80 AIALKNAGQTVTIIAQY 96 (119)
T ss_dssp HHHHHTSCSEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEE
Confidence 99999988888886544
No 73
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.58 E-value=1.7e-14 Score=101.77 Aligned_cols=88 Identities=25% Similarity=0.374 Sum_probs=75.2
Q ss_pred eEEEEEEe-CCCcccEEEeccCCCCCC-CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 15 YEEIRLER-GGAGLGFSIAGGTDNPHI-GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 15 ~~~v~l~k-~~~~lGf~i~gg~~~~~~-~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.++|.|.| +..+|||+|.++.+.... ....+++|..|.++|||+++|+|++||+|++|||..+.++++.++..+|+..
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 85 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 56899999 588999999998764311 1245899999999999999999999999999999999999999999999998
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|...|
T Consensus 86 g~~v~l~v~R 95 (98)
T 1ihj_A 86 DFKIELEIQT 95 (98)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 8888886543
No 74
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=101.56 Aligned_cols=85 Identities=22% Similarity=0.341 Sum_probs=73.5
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
+..+.|.|.|+..+|||++.+..+. ....+++|..|.++|||+++| |++||+|++|||..+.++++.+++.+|+..
T Consensus 2 ~~~r~v~l~k~~~~~G~~l~~~~~~---~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (96)
T 2v90_A 2 MKPRCLHLEKGPQGFGFLLREEKGL---DGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ 77 (96)
T ss_dssp CCCEEEEEECBTTBSCEEEEEEECT---TSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCCEEEEEEeCCCcccEEEEeccCC---CCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5678999999988999999984432 124589999999999999999 999999999999999999999999999988
Q ss_pred CCEEEEeee
Q psy10226 93 GNVVTLLGE 101 (208)
Q Consensus 93 ~~~v~l~~~ 101 (208)
+..+.|...
T Consensus 78 g~~v~l~v~ 86 (96)
T 2v90_A 78 GSCVSLTVV 86 (96)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 778877543
No 75
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.58 E-value=2.8e-14 Score=99.29 Aligned_cols=84 Identities=27% Similarity=0.468 Sum_probs=73.0
Q ss_pred CcceEEEEEEeCC--CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 12 EWEYEEIRLERGG--AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 12 ~~~~~~v~l~k~~--~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+++.|.|.|.. .+|||++.++.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+++.++
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~ 76 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLL------EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLI 76 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTT------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCccEEEEeccC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3567889999963 589999998654 4589999999999999999 999999999999999999999999999
Q ss_pred HhCCCEEEEeeee
Q psy10226 90 KRAGNVVTLLGEK 102 (208)
Q Consensus 90 ~~~~~~v~l~~~~ 102 (208)
+..+..+.|...|
T Consensus 77 ~~~g~~v~l~v~R 89 (91)
T 1m5z_A 77 AESGNKLDLVISR 89 (91)
T ss_dssp HTSTTEEEEEEEE
T ss_pred HcCCCEEEEEEEe
Confidence 9888888875543
No 76
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.57 E-value=9.7e-15 Score=102.39 Aligned_cols=81 Identities=28% Similarity=0.529 Sum_probs=71.4
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.+.|.|.|+..+|||.+.++.+ ..+++|..|.++|||+++| |+.||+|++|||..+.+++|.+++.+|+..
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~------~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPE------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG 76 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC--------CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCcEEEEEecCCCcccEEEEecCC------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456789999998999999998544 3489999999999999999 999999999999999999999999999998
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
++.+.++.
T Consensus 77 ~~~~~~~~ 84 (95)
T 3r68_A 77 GDQTTLLV 84 (95)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 88877743
No 77
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.57 E-value=7.7e-15 Score=105.26 Aligned_cols=85 Identities=22% Similarity=0.353 Sum_probs=72.7
Q ss_pred CCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccC-CCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 11 SEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDG-RLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 11 ~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G-~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
.+...+.|.|.|+ ..+|||++.++.+. ..+++|..|.++|+|+++| +|+.||+|++|||.++.+++|.+++.+
T Consensus 14 ~~~~~~~v~l~~~~~~~~G~~~~gg~~~-----~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~ 88 (107)
T 3nfk_A 14 PHDNLVLIRMKPDENGRFGFNVKGGYDQ-----KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLF 88 (107)
T ss_dssp --CCCEEEEECCCTTSCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCCEEEEEEEcCCCCCCCEEEEccCCC-----CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3455778999987 48899999997663 4589999999999999999 699999999999999999999999999
Q ss_pred HHhCCC----EEEEee
Q psy10226 89 LKRAGN----VVTLLG 100 (208)
Q Consensus 89 l~~~~~----~v~l~~ 100 (208)
|+..+. .+.|.+
T Consensus 89 i~~~~~~~~~~v~l~v 104 (107)
T 3nfk_A 89 IKASCERHSGELMLLV 104 (107)
T ss_dssp HHCGGGSBTTBEEEEE
T ss_pred HHhccccCCcEEEEEE
Confidence 998764 777754
No 78
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=1.9e-14 Score=99.97 Aligned_cols=78 Identities=14% Similarity=0.282 Sum_probs=68.1
Q ss_pred eEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccc-cCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 15 YEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAAS-DGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 15 ~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~-~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.|+|.|+ +.+|||++.++. ..+++|..|.++|+|++ +| |++||+|++|||.++.+++|++++++|+..
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~-------~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 73 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE-------LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREM 73 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC-------GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHC
T ss_pred eEEEEEEeCCCCceeEEEEeCC-------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 468999998 688999999732 34799999999999999 56 999999999999999999999999999987
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
.+.+.|..
T Consensus 74 ~~~v~l~v 81 (88)
T 1kwa_A 74 RGSITFKI 81 (88)
T ss_dssp CEEEEEEE
T ss_pred CCcEEEEE
Confidence 76666643
No 79
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.57 E-value=2e-14 Score=99.75 Aligned_cols=83 Identities=28% Similarity=0.471 Sum_probs=71.3
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
++.++|.+. +..+|||++.++.+. ..+++|..|.++|+|+++| |++||+|++|||..+.++++.+++.+++..
T Consensus 2 ~~~~~v~~~-~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (89)
T 2q3g_A 2 MDSFKVVLE-GPAPWGFRLQGGKDF-----NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC 74 (89)
T ss_dssp EEEEEEEEE-SSSCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC
T ss_pred ccEEEEEEc-CCCcccEEEECcCCC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456677775 457899999987663 4589999999999999999 999999999999999999999999999988
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|...|
T Consensus 75 g~~v~l~v~R 84 (89)
T 2q3g_A 75 GERLSLGLSR 84 (89)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 8888775443
No 80
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=103.11 Aligned_cols=88 Identities=30% Similarity=0.490 Sum_probs=76.1
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+.+.+.|.|.|+..+|||++.++.+.. ...+++|..|.++++|+++|+|+.||+|++|||+.+.++++.+++.+++
T Consensus 8 ~~~~~~~v~l~~~~~g~G~~l~~~~~~~---~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 8 QASGHFSVELVRGYAGFGLTLGGGRDVA---GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp SCCCCEEEEEECCSSSCCEEEECCEETT---EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCceEEEEEEeCCCCccEEEEeccCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4456788999998889999999876531 1458999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEeee
Q psy10226 91 RAGNVVTLLGE 101 (208)
Q Consensus 91 ~~~~~v~l~~~ 101 (208)
..+..+.|.+.
T Consensus 85 ~~g~~v~l~v~ 95 (104)
T 2djt_A 85 AGGPQLHLVIR 95 (104)
T ss_dssp HTCSEEEEEEC
T ss_pred cCCCeEEEEEE
Confidence 88888877543
No 81
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.57 E-value=1.9e-14 Score=102.33 Aligned_cols=82 Identities=29% Similarity=0.522 Sum_probs=72.9
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.++..+.|.|.|+..+|||++.++.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+++.+|+
T Consensus 3 ~~~~~r~v~l~k~~~g~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (102)
T 2d90_A 3 SGSSGRVVVIKKGSNGYGFYLRAGPE------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIR 75 (102)
T ss_dssp SCSSSEEEEEECCSSSSSCEEEECSS------SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCCCCEEEEEeeCCCCccEEEEeecC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778899999998899999998433 4589999999999999999 9999999999999999999999999998
Q ss_pred hCCCEEEEe
Q psy10226 91 RAGNVVTLL 99 (208)
Q Consensus 91 ~~~~~v~l~ 99 (208)
..+..+.|.
T Consensus 76 ~~g~~v~l~ 84 (102)
T 2d90_A 76 KGGDQTTLL 84 (102)
T ss_dssp HSTTEEEEE
T ss_pred cCCCEEEEE
Confidence 877777774
No 82
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.57 E-value=7.7e-15 Score=106.99 Aligned_cols=89 Identities=27% Similarity=0.452 Sum_probs=76.6
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecC-CCCHHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVV-DVPHSAAVEAL 89 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~-~~t~~~av~~l 89 (208)
..+.+.|.|.|. ..+|||++.++.+.. ....+++|..|.++|+|+++|+|++||+|++|||..+. ++++.+++.+|
T Consensus 18 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~--~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 18 GRHVEVFELLKPPSGGLGFSVVGLRSEN--RGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISIL 95 (117)
T ss_dssp TSCEEEEEEECCSSSCSSCCEEEEECCC----CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHH
T ss_pred CCeEEEEEEEECCCCCCCEEEeecccCC--CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 356889999997 688999999877542 22568999999999999999999999999999999998 99999999999
Q ss_pred HhCCCEEEEeeee
Q psy10226 90 KRAGNVVTLLGEK 102 (208)
Q Consensus 90 ~~~~~~v~l~~~~ 102 (208)
+..+..+.|.+.+
T Consensus 96 ~~~~~~v~l~v~R 108 (117)
T 2o2t_A 96 QKAKDTVQLVIAR 108 (117)
T ss_dssp HHCCSEEEEEEES
T ss_pred HcCCCEEEEEEEe
Confidence 9988888885443
No 83
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.56 E-value=4.9e-14 Score=101.66 Aligned_cols=89 Identities=33% Similarity=0.527 Sum_probs=76.0
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+++.+.+.+.++..+|||++.++.+.. .+..+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.+|
T Consensus 7 ~~~~~~~~~~l~~~~~glG~~~~~~~~~~--~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (111)
T 2koj_A 7 KKVGKRLNIQLKKGTEGLGFSITSRDVTI--GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLL 84 (111)
T ss_dssp SSSCEEEEEEEECBTTBTCEEEEECSCSS--SSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cccCcEEEEEEEECCCccCEEEEeccCCC--CCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44677888999988899999999866531 2246899999999999999999999999999999999999999999999
Q ss_pred HhC--CCEEEEee
Q psy10226 90 KRA--GNVVTLLG 100 (208)
Q Consensus 90 ~~~--~~~v~l~~ 100 (208)
+.. +..+.|.+
T Consensus 85 ~~~~~g~~v~l~v 97 (111)
T 2koj_A 85 RSTKMEGTVSLLV 97 (111)
T ss_dssp HHCCCSSEEEEEE
T ss_pred HhCCCCCeEEEEE
Confidence 975 67777744
No 84
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=1.2e-13 Score=99.51 Aligned_cols=96 Identities=35% Similarity=0.487 Sum_probs=80.7
Q ss_pred ccCCCCCcceEEEEEEeCCCcccEEEeccCCCCC-CCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 6 VNGGDSEWEYEEIRLERGGAGLGFSIAGGTDNPH-IGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 6 ~~~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~-~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
.......++.+.+.|.++..+|||+|.++.+... .....+++|..|.++|||+++| |++||+|++|||+.+.++++.+
T Consensus 7 ~~~~~~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~ 85 (110)
T 1x5q_A 7 GEPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHE 85 (110)
T ss_dssp CCCCCCCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CCcccCCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHH
Confidence 3344556777889999988999999998876421 2236789999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCCEEEEeeee
Q psy10226 85 AVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 85 av~~l~~~~~~v~l~~~~ 102 (208)
++..++..+..+.|.+.|
T Consensus 86 ~~~~~~~~g~~v~l~v~R 103 (110)
T 1x5q_A 86 AVEALRGAGTAVQMRVWR 103 (110)
T ss_dssp HHHHHHSCCSEEEEEEEE
T ss_pred HHHHhhCCCCeEEEEEEE
Confidence 999998888888886544
No 85
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=9.4e-15 Score=104.63 Aligned_cols=84 Identities=29% Similarity=0.449 Sum_probs=73.7
Q ss_pred CCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 9 GDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
...+...+.|.|.|+..+|||.+.+..+ ..+++|..|.++|+|+++| |++||+|++|||..+.++++.+++.+
T Consensus 3 ~~~~~~~r~v~l~k~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 75 (106)
T 2eei_A 3 SGSSGQPRLCYLVKEGGSYGFSLKTVQG------KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEK 75 (106)
T ss_dssp SCCCSSSEEEEEECCSSSCSCCEECCSS------CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEeccC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3556788899999998899999987543 4589999999999999999 99999999999999999999999998
Q ss_pred HHhCCCEEEEe
Q psy10226 89 LKRAGNVVTLL 99 (208)
Q Consensus 89 l~~~~~~v~l~ 99 (208)
++..+..+.|.
T Consensus 76 ~~~~~~~v~l~ 86 (106)
T 2eei_A 76 VKKSGSRVMFL 86 (106)
T ss_dssp HHHHCSEEEEE
T ss_pred HHhCCCeEEEE
Confidence 88777777663
No 86
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.56 E-value=4.7e-14 Score=99.25 Aligned_cols=89 Identities=37% Similarity=0.545 Sum_probs=75.8
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCC-CCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPH-IGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~-~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
|+.+.+.+.++..+|||+|.++.+... .....+++|..|.++|||+++| |++||+|++|||..+.++++.+++..++.
T Consensus 2 ~~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 2 MEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp -CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 567789999988899999999876422 1235789999999999999999 99999999999999999999999988888
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
.+..+.|...|
T Consensus 81 ~g~~v~l~v~R 91 (97)
T 2w4f_A 81 AGTAVQMRVWR 91 (97)
T ss_dssp SCSEEEEEEEC
T ss_pred CCCeEEEEEEe
Confidence 88888885443
No 87
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.56 E-value=4.7e-14 Score=102.45 Aligned_cols=79 Identities=32% Similarity=0.438 Sum_probs=67.0
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|+|.|+..||||+|.++. .+.+|..|.+ +++.+| |++||+|++|||.++.+++|.+++++|+++
T Consensus 11 ~~~~~V~L~Kg~~G~GFsI~~~~--------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~ 79 (113)
T 3soe_A 11 GLLVTIPLIKGPKGFGFAIADSP--------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQF 79 (113)
T ss_dssp CEEEEEEEECBTTBSSEEEEEET--------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCEEEEEEEECCCcccEEEeCCC--------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56789999999899999997632 2678999988 466677 999999999999999999999999999986
Q ss_pred --CCEEEEeeee
Q psy10226 93 --GNVVTLLGEK 102 (208)
Q Consensus 93 --~~~v~l~~~~ 102 (208)
+..+.|++.|
T Consensus 80 ~~G~~v~L~V~R 91 (113)
T 3soe_A 80 PVGADVPLLILR 91 (113)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 5678886554
No 88
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.55 E-value=6.2e-14 Score=100.50 Aligned_cols=89 Identities=22% Similarity=0.332 Sum_probs=73.1
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCC-------CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHI-------GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~-------~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
...+.|.|.|+..+|||++.++.+.... .....+||..|.++|+|+++| |+.||+|++|||..+.+++|.++
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 4567899999878999999987543110 002345799999999999999 99999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+.+|++.+..+.|...+
T Consensus 84 ~~~l~~~g~~v~l~v~r 100 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLS 100 (107)
T ss_dssp HHHHHHCSSEEEEEEEC
T ss_pred HHHHHcCCCEEEEEEEc
Confidence 99999988888885443
No 89
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.55 E-value=4.9e-14 Score=98.89 Aligned_cols=89 Identities=27% Similarity=0.408 Sum_probs=75.1
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
+++..+|.|.++..+|||++.++.+... ....+++|..|.++|+|+++|+|++||+|++|||+.+.++++.+++.+++.
T Consensus 2 ~~~~~~v~l~~~~~~lG~~i~~~~~~~~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (97)
T 2iwn_A 2 MSETFDVELTKNVQGLGITIAGYIGDKK-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 80 (97)
T ss_dssp EEEEEEEEEECBTTBSCEEEECCCCC-----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred CcEEEEEEEecCCCCCcEEEEccCCCCC-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4677789998888899999998754321 225689999999999999999999999999999999999999999999998
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
.+..+.|.+.
T Consensus 81 ~~~~v~l~v~ 90 (97)
T 2iwn_A 81 TGQTVLLTLM 90 (97)
T ss_dssp CCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 8888877543
No 90
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.55 E-value=2e-14 Score=98.77 Aligned_cols=79 Identities=25% Similarity=0.411 Sum_probs=68.3
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.+.|.| ++..+|||++.++.+. ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+++.+++..+.
T Consensus 2 ~~~v~l-~~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 74 (85)
T 1rgw_A 2 AYSVTL-TGPGPWGFRLQGGKDF-----NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASY 74 (85)
T ss_dssp EEEEEE-CCSSCCCEEECCCGGG-----TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSS
T ss_pred cEEEEE-eCCCccCEEEEeccCC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCC
Confidence 456777 4567899999987664 4578999999999999999 99999999999999999999999999988777
Q ss_pred EEEEee
Q psy10226 95 VVTLLG 100 (208)
Q Consensus 95 ~v~l~~ 100 (208)
.+.|..
T Consensus 75 ~v~l~v 80 (85)
T 1rgw_A 75 NLSLTL 80 (85)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 777754
No 91
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.54 E-value=1e-13 Score=99.80 Aligned_cols=87 Identities=25% Similarity=0.430 Sum_probs=72.6
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCC-------CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHI-------GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~-------~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
.+.+.|.|.|. ..+|||+|.++.+.... ....+++|..|.++|+|+++| |+.||+|++|||..+.+++|.+
T Consensus 6 ~~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~ 84 (109)
T 1q3o_A 6 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 84 (109)
T ss_dssp EEEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHH
T ss_pred cCcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 45668899864 77899999997763210 113379999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCCEEEEee
Q psy10226 85 AVEALKRAGNVVTLLG 100 (208)
Q Consensus 85 av~~l~~~~~~v~l~~ 100 (208)
++.+|+..+..+.|.+
T Consensus 85 ~~~~l~~~~~~v~l~v 100 (109)
T 1q3o_A 85 VVNMIRQGGNTLMVKV 100 (109)
T ss_dssp HHHHHHHTTTEEEEEE
T ss_pred HHHHHHhCCCEEEEEE
Confidence 9999998888877744
No 92
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.54 E-value=7.4e-15 Score=100.61 Aligned_cols=78 Identities=24% Similarity=0.472 Sum_probs=69.3
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
..++|.|.|+..+|||++.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.+++|.+++.+++..+
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~---------~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 71 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSG---------QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCS 71 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCC---------SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS
T ss_pred CcEEEEEEeCCCcccEEEEc---------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56789999998899999876 3368999999999999999 9999999999999999999999999998877
Q ss_pred CEEEEeee
Q psy10226 94 NVVTLLGE 101 (208)
Q Consensus 94 ~~v~l~~~ 101 (208)
..+.|...
T Consensus 72 ~~v~l~v~ 79 (83)
T 2kv8_A 72 GVLHMVIA 79 (83)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEE
Confidence 77777543
No 93
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=5.7e-15 Score=105.11 Aligned_cols=86 Identities=34% Similarity=0.662 Sum_probs=75.6
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+++.+.+.|.++..+|||++.++.+. ..+++|..|.++|+|+++|+|+.||+|++|||..+.++++.+++.++
T Consensus 7 ~~~~~~~~v~l~~~~~g~G~~~~~~~~~-----~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 81 (103)
T 1wfv_A 7 GQDFDYFTVDMEKGAKGFGFSIRGGREY-----KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELI 81 (103)
T ss_dssp CCCSCCEECCEECCTTSSSBCCEEETTT-----TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred ccCceEEEEEEecCCCcCCEEEeccccC-----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567788899999888899999987653 45899999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEee
Q psy10226 90 KRAGNVVTLLG 100 (208)
Q Consensus 90 ~~~~~~v~l~~ 100 (208)
+..+..+.|.+
T Consensus 82 ~~~g~~v~l~v 92 (103)
T 1wfv_A 82 KSGGRRVRLLL 92 (103)
T ss_dssp HHHCSEECEEE
T ss_pred HcCCCeEEEEE
Confidence 88788777754
No 94
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.54 E-value=1.9e-14 Score=106.76 Aligned_cols=93 Identities=25% Similarity=0.324 Sum_probs=76.6
Q ss_pred CCCCcceEEEEEEeC--CCcccEEEeccCCCCCC----CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCH
Q psy10226 9 GDSEWEYEEIRLERG--GAGLGFSIAGGTDNPHI----GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPH 82 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~--~~~lGf~i~gg~~~~~~----~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~ 82 (208)
....++.+.|.|.|. +.+|||+|.++.+.... ....+++|..|.++|+|+++|+|++||+|++|||..+.+++|
T Consensus 24 ~~~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 24 DILPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp TTSCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred ccCCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 345577889999997 57899999987542000 012479999999999999999899999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEeee
Q psy10226 83 SAAVEALKRAGNVVTLLGE 101 (208)
Q Consensus 83 ~~av~~l~~~~~~v~l~~~ 101 (208)
++++.+|+..+..+.|.+.
T Consensus 104 ~~~~~~l~~~~~~v~l~v~ 122 (128)
T 1nf3_C 104 DQVTDMMIANSRNLIITVR 122 (128)
T ss_dssp HHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEE
Confidence 9999999988888877543
No 95
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.54 E-value=5.4e-14 Score=102.79 Aligned_cols=80 Identities=29% Similarity=0.483 Sum_probs=69.3
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.+.|.|.|. ..+|||+|.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+.+.+++|.+++.+|+.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 89 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADLE----NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQ 89 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSSS----CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCCC----CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 44567778885 788999999977631 4589999999999999999999999999999999999999999999988
Q ss_pred CCCEE
Q psy10226 92 AGNVV 96 (208)
Q Consensus 92 ~~~~v 96 (208)
.+..+
T Consensus 90 ~~~~~ 94 (119)
T 1x6d_A 90 AREPR 94 (119)
T ss_dssp TTSSS
T ss_pred CCCCe
Confidence 76543
No 96
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.54 E-value=1.1e-14 Score=101.48 Aligned_cols=81 Identities=33% Similarity=0.481 Sum_probs=70.6
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.+.|.|.|+..+|||++.+..+ ..+++|..|.++|+|+++| |++||+|++|||..+.++++.++..+|+..+
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 75 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRG------LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG 75 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTT------CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSC
T ss_pred CcEEEEEEeCCCcccEEEEeccC------CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46789999988899999987544 3578999999999999999 9999999999999999999999999999887
Q ss_pred CEEEEeee
Q psy10226 94 NVVTLLGE 101 (208)
Q Consensus 94 ~~v~l~~~ 101 (208)
..+.|...
T Consensus 76 ~~v~l~v~ 83 (91)
T 2vsp_A 76 KNVTLLVC 83 (91)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEE
Confidence 78877543
No 97
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.53 E-value=4.9e-14 Score=99.33 Aligned_cols=84 Identities=24% Similarity=0.341 Sum_probs=73.6
Q ss_pred CCCcceEEEEEEe-CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 10 DSEWEYEEIRLER-GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 10 ~~~~~~~~v~l~k-~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
..+++.+++.|.+ ...+|||++.+. ..+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++.+
T Consensus 4 ~~~~~~~~v~l~~~~~~glG~~~~~~--------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~ 75 (96)
T 2qkv_A 4 RNSLEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYAL 75 (96)
T ss_dssp CCCCCCEEEEEECBTTBCCCEEEEEC--------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred hHHCceEEEEEEeCCCCCccEEEEeC--------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4568888999977 478899999871 3479999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEeee
Q psy10226 89 LKRAGNVVTLLGE 101 (208)
Q Consensus 89 l~~~~~~v~l~~~ 101 (208)
++..++.+.|.+.
T Consensus 76 ~~~~~~~v~l~v~ 88 (96)
T 2qkv_A 76 FKGANGKVSMEVT 88 (96)
T ss_dssp HHTCSSEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 9988888877543
No 98
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.53 E-value=1.6e-13 Score=96.10 Aligned_cols=79 Identities=28% Similarity=0.450 Sum_probs=68.7
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...+.|.|.|+..+|||.+.+ +.+++|..|.++++|+++| |+.||+|++|||+.+.++++.+++..++ .
T Consensus 7 ~~~r~v~l~~~~~~~G~~l~~---------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~ 75 (93)
T 2dls_A 7 GVQRCVIIQKDQHGFGFTVSG---------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-S 75 (93)
T ss_dssp CCEEEEEEECSSSSCCEEEEC---------SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-S
T ss_pred CCCEEEEEEeCCCceeEEEeC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-C
Confidence 456789999998999999987 3578999999999999999 9999999999999999999998888877 5
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|.+.+
T Consensus 76 g~~v~l~v~R 85 (93)
T 2dls_A 76 GAYVALTLLG 85 (93)
T ss_dssp SSEEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 7777775443
No 99
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.53 E-value=5.7e-14 Score=99.45 Aligned_cols=79 Identities=20% Similarity=0.330 Sum_probs=69.5
Q ss_pred eEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 15 YEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 15 ~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
.+.|.|.|. +++|||++.... +.+++|..|.++|+|+++|+|++||+|++|||.++.++++++++++|+..+
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~-------~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 85 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNE-------KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK 85 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECT-------TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC
T ss_pred cEEEEEEeCCCCCeeEEEEeCC-------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 568999996 678999998632 248999999999999999999999999999999999999999999999887
Q ss_pred CEEEEee
Q psy10226 94 NVVTLLG 100 (208)
Q Consensus 94 ~~v~l~~ 100 (208)
..+.|.+
T Consensus 86 ~~v~L~V 92 (97)
T 2ejy_A 86 GMISLKV 92 (97)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 7777743
No 100
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.53 E-value=3.2e-14 Score=102.27 Aligned_cols=78 Identities=26% Similarity=0.387 Sum_probs=68.4
Q ss_pred cceEEEEEEe-CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLER-GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k-~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
++.++|.|.| ...+|||++.+. ..+++|..|.+||+|+++|+|++||+|++|||..+.++++.+++.+++.
T Consensus 1 ~~~~~v~L~k~~~~glG~~i~~~--------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 72 (106)
T 2la8_A 1 LEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG 72 (106)
T ss_dssp CEEEEEEECCBSSSTTCCEEEEC--------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS
T ss_pred CeEEEEEEEeCCCCccCEEEEeC--------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 4678899986 478899999871 3589999999999999999999999999999999999999999998888
Q ss_pred CCCEEEE
Q psy10226 92 AGNVVTL 98 (208)
Q Consensus 92 ~~~~v~l 98 (208)
.++.+.|
T Consensus 73 ~~~~v~l 79 (106)
T 2la8_A 73 ANGKVSM 79 (106)
T ss_dssp CBSCEEE
T ss_pred CCCeEEE
Confidence 7776666
No 101
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.53 E-value=1.9e-13 Score=100.43 Aligned_cols=90 Identities=33% Similarity=0.516 Sum_probs=76.9
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
..+|+.+.|.+.++..+|||+|.++.+.. .+..+++|..|.++|+|+++|+|++||+|++|||..+.++++.+++++|
T Consensus 26 ~~~~~~~~v~l~~~~~~lG~~l~~~~~~~--~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l 103 (121)
T 2kom_A 26 KKIGKRLNIQLKKGTEGLGFSITSRDVTI--GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLL 103 (121)
T ss_dssp CCSCEEEEEEEECCTTCCCEEEECCCCSS--SSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHH
T ss_pred ccCCeEEEEEEEcCCCcEeEEEEeccCCc--CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 45688889999988889999999866532 1246899999999999999999999999999999999999999999999
Q ss_pred HhC--CCEEEEeee
Q psy10226 90 KRA--GNVVTLLGE 101 (208)
Q Consensus 90 ~~~--~~~v~l~~~ 101 (208)
+.. +..+.|.+.
T Consensus 104 ~~~~~g~~v~l~v~ 117 (121)
T 2kom_A 104 RSTKMEGTVSLLVF 117 (121)
T ss_dssp HHCCSSCEEEEEEE
T ss_pred hcCCCCCEEEEEEE
Confidence 975 677777543
No 102
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.52 E-value=2.7e-14 Score=103.23 Aligned_cols=89 Identities=38% Similarity=0.637 Sum_probs=78.1
Q ss_pred CCCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 8 GGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
......+.+.|.|.|+..+|||+|.++.+ ..+++|..|.++++|+++|+|++||+|++|||+.+.++++.+++.
T Consensus 9 ~~~~~~~~~~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 82 (113)
T 1um7_A 9 PGGDAREPRKIILHKGSTGLGFNIVGGED------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAA 82 (113)
T ss_dssp CCCCCCSEEEEEEECCSSCSSBCCBCCST------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCcCCCceEEEEEEECCCcccEEEEeccC------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34556788899999988899999998654 358999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeee
Q psy10226 88 ALKRAGNVVTLLGEK 102 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~ 102 (208)
+++..+..+.|.+.+
T Consensus 83 ~~~~~~~~v~l~v~r 97 (113)
T 1um7_A 83 ALKRAGQSVTIVAQY 97 (113)
T ss_dssp HHHSCCSEEEEEEEC
T ss_pred HHHhCCCcEEEEEEE
Confidence 999888888886543
No 103
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.52 E-value=7.3e-14 Score=96.96 Aligned_cols=72 Identities=18% Similarity=0.402 Sum_probs=64.6
Q ss_pred EEEEEeC--CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 17 EIRLERG--GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 17 ~v~l~k~--~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.|.|.+. .+.|||.+.+ ++||..|.+||+|+++|+|+.||+|++|||.++.+++|++++++|+.+++
T Consensus 3 ~v~l~~~~~~~~~G~~~~~-----------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 71 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS-----------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG 71 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE-----------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT
T ss_pred EEEEEeCCCCCCCCEEEeC-----------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3556663 5679999976 79999999999999999999999999999999999999999999999988
Q ss_pred EEEEe
Q psy10226 95 VVTLL 99 (208)
Q Consensus 95 ~v~l~ 99 (208)
.+.|.
T Consensus 72 ~v~L~ 76 (88)
T 3e17_A 72 KLQLV 76 (88)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88884
No 104
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.52 E-value=2e-13 Score=97.04 Aligned_cols=86 Identities=27% Similarity=0.399 Sum_probs=70.0
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.+.|.|.|. +.+|||++.+.... ....+++|..|.++|+|+++|.|++||+|++|||..+.+.++++++++|+.
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~---~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWG---SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCS---SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCC---CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45678899885 57899999852211 123479999999999999965599999999999999999999999999998
Q ss_pred --CCCEEEEeee
Q psy10226 92 --AGNVVTLLGE 101 (208)
Q Consensus 92 --~~~~v~l~~~ 101 (208)
.+..+.|.+.
T Consensus 85 ~~~g~~v~l~v~ 96 (101)
T 2yt7_A 85 TKSQTSVTLSIV 96 (101)
T ss_dssp TTTSSEEEEEEC
T ss_pred CCCCCeEEEEEE
Confidence 6777777543
No 105
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.52 E-value=1.8e-14 Score=119.23 Aligned_cols=84 Identities=35% Similarity=0.512 Sum_probs=74.1
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccc-cCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAAS-DGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~-~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
.++.+.|+|.|. ..+|||+|.|+.+. ..++||..|.+||+|++ +| |++||+|++|||+++.+++|.+++.+|
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~-----~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l 148 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGREN-----KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQAL 148 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTT-----TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHH
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCC-----CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 346789999997 68999999998764 56899999999999999 46 999999999999999999999999999
Q ss_pred HhCCCEEEEeee
Q psy10226 90 KRAGNVVTLLGE 101 (208)
Q Consensus 90 ~~~~~~v~l~~~ 101 (208)
+..+..|.|.+.
T Consensus 149 ~~~g~~V~L~V~ 160 (263)
T 1z87_A 149 KKTGKEVVLEVK 160 (263)
T ss_dssp HHCCSCCCEEEE
T ss_pred hcCCCeEEEEEE
Confidence 998887777443
No 106
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=3.5e-14 Score=100.83 Aligned_cols=87 Identities=25% Similarity=0.364 Sum_probs=75.4
Q ss_pred ccCCCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 6 VNGGDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 6 ~~~~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
-.+...+++.+.|.|.++..+|||.+.+ ..+++|..|.++++|+++| |+.||+|++|||..+.++++.++
T Consensus 7 ~~~~~~~~~~~~v~l~~~~~g~G~~~~~---------~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~ 76 (100)
T 1whd_A 7 GEGDPENGEKLQITIRRGKDGFGFTICC---------DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVEL 76 (100)
T ss_dssp TCSSCCCCEEEEEEEECCSSSSSCBCCC---------SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHH
T ss_pred CCCCccccceEEEEEECCCCeeeEEEeC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 3455667888899999988899999877 2478999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCCEEEEeeee
Q psy10226 86 VEALKRAGNVVTLLGEK 102 (208)
Q Consensus 86 v~~l~~~~~~v~l~~~~ 102 (208)
+.+|+..+..+.|.+.|
T Consensus 77 ~~~l~~~~~~v~l~v~R 93 (100)
T 1whd_A 77 AHEIRSCPSEIILLVWR 93 (100)
T ss_dssp HHHHHHCSSEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEE
Confidence 99999887777775433
No 107
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.51 E-value=9.9e-14 Score=95.76 Aligned_cols=78 Identities=27% Similarity=0.423 Sum_probs=66.5
Q ss_pred EEEEe-CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEE
Q psy10226 18 IRLER-GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVV 96 (208)
Q Consensus 18 v~l~k-~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v 96 (208)
+++.+ +..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||..+.++++.++.++|+.....+
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 77 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDF-----HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPL 77 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGG-----TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSE
T ss_pred EEEEECCCCccCEEEecccCC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 33333 577899999987653 4589999999999999999 9999999999999999999999999999877777
Q ss_pred EEeee
Q psy10226 97 TLLGE 101 (208)
Q Consensus 97 ~l~~~ 101 (208)
.|...
T Consensus 78 ~l~v~ 82 (87)
T 2pa1_A 78 RLQLD 82 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77543
No 108
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=6.3e-14 Score=98.27 Aligned_cols=81 Identities=26% Similarity=0.342 Sum_probs=70.1
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...+.|.| ++..+|||++.++.+. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~~~v~l-~~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 79 (94)
T 2eeg_A 7 GMPHSVTL-RGPSPWGFRLVGGRDF-----SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC 79 (94)
T ss_dssp CCCEEEEE-CCSSCCSCCEECCTTT-----TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC
T ss_pred CceEEEEE-eCCCccCEEEECccCC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44567778 4567899999998764 4578999999999999999 999999999999999999999999999888
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..+.|.+
T Consensus 80 g~~v~l~v 87 (94)
T 2eeg_A 80 HDHLTLSV 87 (94)
T ss_dssp CSCEEEEE
T ss_pred CCeEEEEE
Confidence 77777754
No 109
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.51 E-value=1.8e-13 Score=99.57 Aligned_cols=84 Identities=21% Similarity=0.315 Sum_probs=71.9
Q ss_pred CcceEEEEEEeCC-CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 12 EWEYEEIRLERGG-AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 12 ~~~~~~v~l~k~~-~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
....++|.|.|+. .+|||++.++.+. ..+++|..|.++|+|+++|+|+.||+|++|||..+.+.++.++..+|+
T Consensus 22 ~~~~~~V~l~~~~~~~lG~~l~~~~~~-----~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~ 96 (114)
T 2gzv_A 22 SMVPGKVTLQKDAQNLIGISIGGGAQY-----CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 96 (114)
T ss_dssp CCCCEEEEEECCTTSCCSEEEEECCC-------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred cCCCEEEEEEECCCCcEeEEEEeCCCC-----CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3456789999974 5599999986653 357999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEee
Q psy10226 91 RAGNVVTLLG 100 (208)
Q Consensus 91 ~~~~~v~l~~ 100 (208)
..++.+.|.+
T Consensus 97 ~~~~~v~l~v 106 (114)
T 2gzv_A 97 EVKGEVTIHY 106 (114)
T ss_dssp HCCSEEEEEE
T ss_pred cCCCeEEEEE
Confidence 8888777643
No 110
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=7.5e-14 Score=102.12 Aligned_cols=80 Identities=28% Similarity=0.485 Sum_probs=66.2
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC--
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA-- 92 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~-- 92 (208)
.+.+.+.+. .+|||+|.++.+.. ...++|..|.+||+|+++|.|++||+|++|||+.+.+++|++++.+|++.
T Consensus 19 ~~~~~~~~~-~glG~~i~gg~~~~----~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 93 (118)
T 1v6b_A 19 VRLLRIKKE-GSLDLALEGGVDSP----VGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWN 93 (118)
T ss_dssp EEEEEEESC-SCCCCEEEEBTTSS----SCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHH
T ss_pred EEEEEECCC-CccCEEEEcccCCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhh
Confidence 456666665 48999999987653 24599999999999999944999999999999999999999999999864
Q ss_pred --CCEEEEe
Q psy10226 93 --GNVVTLL 99 (208)
Q Consensus 93 --~~~v~l~ 99 (208)
+..+.|.
T Consensus 94 ~~g~~v~l~ 102 (118)
T 1v6b_A 94 QGGDWIDLV 102 (118)
T ss_dssp HTCSEEEEE
T ss_pred cCCCeEEEE
Confidence 5566663
No 111
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.50 E-value=1.9e-13 Score=96.35 Aligned_cols=81 Identities=23% Similarity=0.411 Sum_probs=70.4
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
++..+.|.|.|+..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||..+.++++.++..+|+.
T Consensus 7 ~~~~~~~~l~~~~~g~G~~~~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (98)
T 2jxo_A 7 MLRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (98)
T ss_dssp SSCCEEEEEECTTTCCCEEEECCCS------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cCCcEEEEEEeCCCcccEEEEecCC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567789999988899999998543 3589999999999999999 99999999999999999999999999998
Q ss_pred CCCE-EEEe
Q psy10226 92 AGNV-VTLL 99 (208)
Q Consensus 92 ~~~~-v~l~ 99 (208)
..+. +.|+
T Consensus 80 ~~~~~~~l~ 88 (98)
T 2jxo_A 80 GGDETKLLV 88 (98)
T ss_dssp TTTEEEEEE
T ss_pred CCCcEEEEE
Confidence 7554 3353
No 112
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.50 E-value=5.4e-14 Score=102.24 Aligned_cols=82 Identities=39% Similarity=0.594 Sum_probs=72.0
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.+.|.|.++..+|||++.++.+.. ..+++|..|.++|+|+++|+|+.||+|++|||+.+.++++.+++.+|+..+
T Consensus 17 ~~~~v~l~~~~~glG~~l~~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 92 (116)
T 2dm8_A 17 QEMIIEISKGRSGLGLSIVGGKDTP----LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP 92 (116)
T ss_dssp SCEEEEEECCSSCCCCCCBCCTTSS----CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEeCCCCCC----cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3468899998899999999876642 258999999999999999999999999999999999999999999998877
Q ss_pred CEEEEe
Q psy10226 94 NVVTLL 99 (208)
Q Consensus 94 ~~v~l~ 99 (208)
..+.|.
T Consensus 93 ~~v~l~ 98 (116)
T 2dm8_A 93 QKVRLV 98 (116)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 777774
No 113
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.50 E-value=2.6e-13 Score=93.84 Aligned_cols=79 Identities=28% Similarity=0.461 Sum_probs=66.0
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR-- 91 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~-- 91 (208)
+.++|+|.|+..+|||++.+..+ ..+++|..+ ++|||+ +| |++||+|++|||..+.+++|.+++.+|++
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~------~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 73 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPG------GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESP 73 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTT------SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred cEEEEEEEcCCCceeEEEEecCC------CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 57789999988999999997433 458899887 999999 88 99999999999999999999999999986
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
.+..+.|...
T Consensus 74 ~g~~v~l~v~ 83 (88)
T 3bpu_A 74 KGSEVTLLVQ 83 (88)
T ss_dssp TTCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 4677777543
No 114
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=2.7e-13 Score=99.60 Aligned_cols=91 Identities=22% Similarity=0.254 Sum_probs=74.7
Q ss_pred CCCCCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHH
Q psy10226 8 GGDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAV 86 (208)
Q Consensus 8 ~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av 86 (208)
+.....+.++|.|.|+ ..+|||+|.++..... ....+++|..|.++++|+++|+|++||+|++|||+.+.++++++++
T Consensus 9 g~~~~~~~~~v~l~k~~~~glG~~l~~~~~~~~-~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~ 87 (122)
T 1v5q_A 9 GQVVHTETTEVVLTADPVTGFGIQLQGSVFATE-TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN 87 (122)
T ss_dssp CCCCCEEEEEEEECCCSSSSSCEEEECCSCCSS-SCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHH
T ss_pred CccccceeEEEEEEeCCCCccCEEEecccccCC-cCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4455678889999997 6899999998743211 1245789999999999999999999999999999999999999999
Q ss_pred HHHHhC--CCEEEEe
Q psy10226 87 EALKRA--GNVVTLL 99 (208)
Q Consensus 87 ~~l~~~--~~~v~l~ 99 (208)
++|+.. +..+.|.
T Consensus 88 ~~l~~~~~g~~v~l~ 102 (122)
T 1v5q_A 88 QLLRDSSITSKVTLE 102 (122)
T ss_dssp HHHHHHTTTTCEEEE
T ss_pred HHHHhCCCCCeEEEE
Confidence 999875 4566663
No 115
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=6e-14 Score=100.00 Aligned_cols=80 Identities=23% Similarity=0.408 Sum_probs=69.4
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
.+.++|.|. +..+|||++.++.+. ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+++.+++..
T Consensus 4 g~~~~v~l~-~~~~~G~~l~gg~~~-----~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 76 (103)
T 1wf7_A 4 GSSGSVSLV-GPAPWGFRLQGGKDF-----NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC 76 (103)
T ss_dssp CCCEEEEEE-SSSCCSCCEEEETTT-----TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCEEEEEEe-CCCccCEEEeccccC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345677776 567899999998764 4579999999999999999 999999999999999999999999988887
Q ss_pred CCEEEEe
Q psy10226 93 GNVVTLL 99 (208)
Q Consensus 93 ~~~v~l~ 99 (208)
+..+.|.
T Consensus 77 g~~v~l~ 83 (103)
T 1wf7_A 77 TGSLNMT 83 (103)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 7777774
No 116
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.49 E-value=1.1e-13 Score=97.84 Aligned_cols=84 Identities=24% Similarity=0.295 Sum_probs=69.2
Q ss_pred EEEEEeCCCcccEEEeccCCCCCC--CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 17 EIRLERGGAGLGFSIAGGTDNPHI--GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 17 ~v~l~k~~~~lGf~i~gg~~~~~~--~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.|.|.|+..+|||++.++...... ....+++|..|.++|||+++| |+.||+|++|||..+.++++.+++.+|+..+.
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 578888889999999976542110 012367899999999999999 99999999999999999999999999999888
Q ss_pred EEEEeee
Q psy10226 95 VVTLLGE 101 (208)
Q Consensus 95 ~v~l~~~ 101 (208)
.+.|...
T Consensus 84 ~v~l~v~ 90 (99)
T 3khf_A 84 KISLRTT 90 (99)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888543
No 117
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.49 E-value=1.7e-13 Score=98.02 Aligned_cols=80 Identities=30% Similarity=0.384 Sum_probs=70.7
Q ss_pred eEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 15 YEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 15 ~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
.+.|.|.|. +.+|||.+..+.+ ..+++|..|.+||||+++| |+.||+|++|||..+.+++|.+++.+|++.+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 74 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG 74 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT------CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTT
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC------CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 367889987 5789999998544 4578999999999999999 9999999999999999999999999999889
Q ss_pred CEEEEeee
Q psy10226 94 NVVTLLGE 101 (208)
Q Consensus 94 ~~v~l~~~ 101 (208)
..+.|...
T Consensus 75 ~~v~l~v~ 82 (106)
T 3ngh_A 75 NSVTLLVL 82 (106)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 88888543
No 118
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.48 E-value=3.3e-13 Score=97.86 Aligned_cols=80 Identities=20% Similarity=0.344 Sum_probs=69.7
Q ss_pred ceEEEEEEeCCC-cccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 14 EYEEIRLERGGA-GLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 14 ~~~~v~l~k~~~-~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
..+.|.|.|... +|||++.+. ..+++|..|.++|+|+++|.|+.||+|++|||..+.++++++++.+|+..
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~--------~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 96 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE--------MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM 96 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC--------SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred ceEEEEEEeCCCCceeEEEEeC--------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 566799999855 999999874 35899999999999999993399999999999999999999999999988
Q ss_pred CCEEEEeee
Q psy10226 93 GNVVTLLGE 101 (208)
Q Consensus 93 ~~~v~l~~~ 101 (208)
++.+.|.+.
T Consensus 97 ~~~v~l~v~ 105 (113)
T 1va8_A 97 HGTLTFVLI 105 (113)
T ss_dssp CEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 877777543
No 119
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.47 E-value=9.6e-13 Score=106.04 Aligned_cols=83 Identities=23% Similarity=0.401 Sum_probs=73.7
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+...+.|.|.|+..+|||.|.++.+ ..+++|..|.+|++|+++| |+.||+|++|||+.+.++++.+++.+|+
T Consensus 6 ~~~~~r~v~l~k~~~glG~~l~~~~~------~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~ 78 (216)
T 2krg_A 6 TMLRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (216)
T ss_dssp TTCCCEEEEEECCSSSSCEEECCCSS------SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHH
T ss_pred cccceEEEEEEeCCCCceEEEEecCC------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778899999998899999998553 3489999999999999999 9999999999999999999999999999
Q ss_pred hCCCEE-EEee
Q psy10226 91 RAGNVV-TLLG 100 (208)
Q Consensus 91 ~~~~~v-~l~~ 100 (208)
..+..+ .|++
T Consensus 79 ~~g~~v~~l~V 89 (216)
T 2krg_A 79 AGGDETKLLVV 89 (216)
T ss_dssp HHCSEEEEEEC
T ss_pred hcCCeEEEEEE
Confidence 878777 6654
No 120
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.47 E-value=3.2e-13 Score=99.51 Aligned_cols=92 Identities=28% Similarity=0.411 Sum_probs=73.2
Q ss_pred CCCcceEEEEEEeC-CCcccEEEeccCCCCC----CCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 10 DSEWEYEEIRLERG-GAGLGFSIAGGTDNPH----IGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 10 ~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~----~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
...+..++|.+.|+ ..+|||++.++.+... .....+++|..|.++|||+++|+|++||+|++|||..+.++++.+
T Consensus 20 s~~~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 99 (123)
T 2iwq_A 20 FQSMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ 99 (123)
T ss_dssp ---CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred cccCCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 33456678999986 5789999998654311 112458999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEeee
Q psy10226 85 AVEALKRAGNVVTLLGE 101 (208)
Q Consensus 85 av~~l~~~~~~v~l~~~ 101 (208)
++++|+..++.+.|.+.
T Consensus 100 ~~~~l~~~~~~v~l~v~ 116 (123)
T 2iwq_A 100 AVEAIRKAGNPVVFMVQ 116 (123)
T ss_dssp HHHHHHHCCSSEEEEEE
T ss_pred HHHHHHcCCCeEEEEEE
Confidence 99999988877777543
No 121
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.47 E-value=3.8e-13 Score=93.54 Aligned_cols=81 Identities=27% Similarity=0.468 Sum_probs=69.4
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.+.|.+. +..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||..+.++.+.++..+++..+.
T Consensus 4 ~~~v~~~-~~~~~G~~l~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 76 (91)
T 2pkt_A 4 TQQIDLQ-GPGPWGFRLVGGKDF-----EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTD 76 (91)
T ss_dssp EEEEEEE-SSSCCSEEEEEEGGG-----TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred cEEEEEC-CCCCCCEEEEccCCC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3456665 457899999987653 4589999999999999999 99999999999999999999999999999888
Q ss_pred EEEEeeee
Q psy10226 95 VVTLLGEK 102 (208)
Q Consensus 95 ~v~l~~~~ 102 (208)
.+.|...|
T Consensus 77 ~v~l~v~R 84 (91)
T 2pkt_A 77 NLTLTVAR 84 (91)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 88886544
No 122
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=3.7e-13 Score=95.68 Aligned_cols=90 Identities=29% Similarity=0.443 Sum_probs=70.7
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCC----CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHI----GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~----~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
...++|.|.|. ...|||++.++.+.... ....+++|..|.++|||+++|+|++||+|++|||..+.++++.++..
T Consensus 3 ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 3 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp CSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45678999886 46799999986553110 11358999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEeeee
Q psy10226 88 ALKRAGNVVTLLGEK 102 (208)
Q Consensus 88 ~l~~~~~~v~l~~~~ 102 (208)
+|+..++.+.|.+.+
T Consensus 83 ~l~~~~~~v~l~v~r 97 (103)
T 2fcf_A 83 AIRKAGNPVVFMVQS 97 (103)
T ss_dssp HHHTCCSSEEEEEEC
T ss_pred HHHhCCCcEEEEEEE
Confidence 999887777775433
No 123
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.46 E-value=2.2e-13 Score=98.42 Aligned_cols=77 Identities=22% Similarity=0.282 Sum_probs=67.7
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
..+.|.|.|+..+|||.+.+ ..+++|..|.++++|+++| |+.||+|++|||..+.++++++++++|+..+
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~---------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~ 92 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRG---------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFG 92 (109)
T ss_dssp SCEEEEECCGGGCCCEEEES---------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCEEEEEEeCCCceeEEEeC---------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45789999988899999976 3478999999999999999 9999999999999999999999999998876
Q ss_pred CE-EEEee
Q psy10226 94 NV-VTLLG 100 (208)
Q Consensus 94 ~~-v~l~~ 100 (208)
+. +.|.+
T Consensus 93 ~~~v~l~V 100 (109)
T 2vsv_A 93 EDEIEMKV 100 (109)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 64 66643
No 124
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=5.7e-14 Score=103.85 Aligned_cols=90 Identities=21% Similarity=0.310 Sum_probs=73.8
Q ss_pred CcceEEEEEEeCCCcccEEEeccCCCCC-----------------------CCCCCcEEEEEECCCCcccccCCCCCCCE
Q psy10226 12 EWEYEEIRLERGGAGLGFSIAGGTDNPH-----------------------IGDDTSIYITKLIPGGAAASDGRLQVNDV 68 (208)
Q Consensus 12 ~~~~~~v~l~k~~~~lGf~i~gg~~~~~-----------------------~~~~~~i~I~~v~~gg~A~~~G~L~~gD~ 68 (208)
....++|.|.|+..+|||+|.+...+.. .....+++|..|.++++|+++| |++||+
T Consensus 6 ~~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~ 84 (126)
T 2yuy_A 6 SGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDR 84 (126)
T ss_dssp SSSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCC
T ss_pred CCCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCE
Confidence 3456689999998899999986332110 0123579999999999999999 999999
Q ss_pred EEEECCeecCCCCHHHHHHHHHhCCCEEEEeeee
Q psy10226 69 IHQVNHVTVVDVPHSAAVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 69 Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~~~ 102 (208)
|++|||+.+.+++|.+++.+|+..+..+.|.+.+
T Consensus 85 I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r 118 (126)
T 2yuy_A 85 IIKVNGESVIGKTYSQVIALIQNSDTTLELSVMP 118 (126)
T ss_dssp CCEETTEECSSCCHHHHHHHHHTCTTEEEEECCC
T ss_pred EEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEE
Confidence 9999999999999999999999888888885443
No 125
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.45 E-value=3.9e-13 Score=95.88 Aligned_cols=87 Identities=21% Similarity=0.311 Sum_probs=71.7
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCC--CCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNP--HIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~--~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
.+..+.|.|.|. .++|||+|.+..... ......+++|..|.++++|+++| |++||+|++|||+.+.++++++++++
T Consensus 13 ~~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 13 WSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp CSCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CCcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 455667889986 678999999843210 01124689999999999999999 99999999999999999999999999
Q ss_pred HHhCCCEEEEe
Q psy10226 89 LKRAGNVVTLL 99 (208)
Q Consensus 89 l~~~~~~v~l~ 99 (208)
|+..++.+.|.
T Consensus 92 l~~~~~~v~l~ 102 (104)
T 2z17_A 92 IRSSGNLLTIE 102 (104)
T ss_dssp HHHTTTEEEEE
T ss_pred HHhCCCcEEEE
Confidence 99987777763
No 126
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.45 E-value=7.2e-13 Score=96.08 Aligned_cols=90 Identities=29% Similarity=0.381 Sum_probs=76.3
Q ss_pred ccCCCCCcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHH
Q psy10226 6 VNGGDSEWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSA 84 (208)
Q Consensus 6 ~~~~~~~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~ 84 (208)
+++-....+.+.+.|.++ ...|||.+..+.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.+
T Consensus 5 ~~~~~~~ldp~~~~l~~~~~~~~G~~l~~~~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~ 77 (114)
T 2edz_A 5 SSGMASTFNPRECKLSKQEGQNYGFFLRIEKD------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQ 77 (114)
T ss_dssp CCCCCCCCCCEEEEEECCTTCCCSCEEECCTT------CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHH
T ss_pred hhhHhhcCCCEEEEEeCCCCCcccEEEEEecC------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 334344567888999986 7789999987543 4589999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCCEEEEeeee
Q psy10226 85 AVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 85 av~~l~~~~~~v~l~~~~ 102 (208)
++.+|+..+..+.|...|
T Consensus 78 ~~~~l~~~g~~v~l~v~R 95 (114)
T 2edz_A 78 VVELVRKSGNSVTLLVLD 95 (114)
T ss_dssp HHHHHHHTCSEEEEEEEC
T ss_pred HHHHHHcCCCEEEEEEEE
Confidence 999999888888886543
No 127
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=5.6e-13 Score=94.42 Aligned_cols=85 Identities=26% Similarity=0.462 Sum_probs=70.8
Q ss_pred CCCcceEEEEEEeCC-CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGG-AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~-~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
......++|.|.|.. ..|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||..+.++++.+++..
T Consensus 6 ~~~~~~~~v~l~~~~~~~lG~~~~~~~~~-----~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 79 (100)
T 2eeh_A 6 SGSDIIHSVRVEKSPAGRLGFSVRGGSEH-----GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKV 79 (100)
T ss_dssp SCCCEECCEEECCCSSSSCSEEEECCTTT-----TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHH
T ss_pred CCCCeEEEEEEEECCCCCccEEEEccccC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHh
Confidence 344566789999974 4599999986542 4589999999999999999 99999999999999999999999998
Q ss_pred HHhCCCEEEEeee
Q psy10226 89 LKRAGNVVTLLGE 101 (208)
Q Consensus 89 l~~~~~~v~l~~~ 101 (208)
++. +..+.|...
T Consensus 80 ~~~-~~~v~l~v~ 91 (100)
T 2eeh_A 80 LTS-SSRLHMMVR 91 (100)
T ss_dssp HHS-CSSEEEEEE
T ss_pred hcC-CCEEEEEEE
Confidence 887 666666443
No 128
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.45 E-value=2.4e-13 Score=107.48 Aligned_cols=82 Identities=32% Similarity=0.561 Sum_probs=72.7
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.+.|.|.|. ..+|||++.++.+. ..+++|..|.+||+|+++| |++||+|++|||..+.+++|.+++.+|+.
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~-----~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~ 156 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEF-----GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT 156 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGG-----TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS
T ss_pred CceEEEEEEeCCCCceeEEEEccccc-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC
Confidence 45678999997 78999999987653 4589999999999999999 99999999999999999999999999988
Q ss_pred CCCEEEEeee
Q psy10226 92 AGNVVTLLGE 101 (208)
Q Consensus 92 ~~~~v~l~~~ 101 (208)
+..+.|.+.
T Consensus 157 -~~~v~l~v~ 165 (192)
T 3k1r_A 157 -EKTVSIKVR 165 (192)
T ss_dssp -SSEEEEEEE
T ss_pred -CCeEEEEEE
Confidence 888888543
No 129
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=2.3e-12 Score=90.78 Aligned_cols=83 Identities=24% Similarity=0.447 Sum_probs=69.7
Q ss_pred CCCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 9 GDSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
.....+.+.|.|.|+..+|||+|.+. ..+++|..|.++ |+++| |++||+|++|||.++.+++|.+++++
T Consensus 5 ~~~~~~~~~v~l~~~~~g~G~~i~~~--------~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~ 73 (96)
T 1ujv_A 5 SSGQAELMTLTIVKGAQGFGFTIADS--------PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDI 73 (96)
T ss_dssp CCCCCCCEEEEEECCSSSSSEEEEEE--------TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHH
T ss_pred CCCCceEEEEEEEeCCCceeEEEEcC--------CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34567788999999989999999752 237999999994 67888 99999999999999999999999999
Q ss_pred HHhC--CCEEEEeeee
Q psy10226 89 LKRA--GNVVTLLGEK 102 (208)
Q Consensus 89 l~~~--~~~v~l~~~~ 102 (208)
|+.. +..+.|.+.|
T Consensus 74 l~~~~~g~~v~l~v~R 89 (96)
T 1ujv_A 74 LKDCPIGSETSLIIHR 89 (96)
T ss_dssp HHHSCTTSEEEEEEEC
T ss_pred HHcCCCCCEEEEEEEE
Confidence 9984 6778775544
No 130
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.44 E-value=5.8e-13 Score=93.61 Aligned_cols=83 Identities=20% Similarity=0.314 Sum_probs=66.8
Q ss_pred CCCcceEEEEEEeCC---CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHH
Q psy10226 10 DSEWEYEEIRLERGG---AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAV 86 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~---~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av 86 (208)
.+.+..+.|.|.|.. .+|||++.+.... +..+++|..|.++|+|+++| |+.||+|++|||..+.+++++++.
T Consensus 2 ~~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~----~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~ 76 (94)
T 3kzd_A 2 AMGKVTHSIHIEKSDTAADTYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLK 76 (94)
T ss_dssp --CCEEEEEEEEC------CCSEEEEEECSS----SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHH
T ss_pred CcccceeEEEEEeCCCCcCCcCEEEEecCCC----CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 355778899999974 4799999975432 24589999999999999999 999999999999999999999999
Q ss_pred HHHHhCCCEEEEe
Q psy10226 87 EALKRAGNVVTLL 99 (208)
Q Consensus 87 ~~l~~~~~~v~l~ 99 (208)
.++++ ..+.|.
T Consensus 77 ~~l~~--~~l~lt 87 (94)
T 3kzd_A 77 DFLSQ--PSLGLL 87 (94)
T ss_dssp HHHHS--SEEEEE
T ss_pred HHHhC--CeEEEE
Confidence 99985 345553
No 131
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.44 E-value=7.5e-13 Score=103.84 Aligned_cols=90 Identities=54% Similarity=0.737 Sum_probs=77.4
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
..+.+.+.+...+|||++.++.+........+++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++.+|++++
T Consensus 100 ~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 179 (196)
T 3gsl_A 100 KVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 179 (196)
T ss_dssp EEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC
T ss_pred ccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC
Confidence 34567787777799999998776544444578999999999999999999999999999999999999999999999998
Q ss_pred CEEEEeeeee
Q psy10226 94 NVVTLLGEKN 103 (208)
Q Consensus 94 ~~v~l~~~~~ 103 (208)
..+.|...|.
T Consensus 180 ~~v~l~v~R~ 189 (196)
T 3gsl_A 180 DVVYLKVAKP 189 (196)
T ss_dssp EEEEEEEEEE
T ss_pred CeEEEEEeCC
Confidence 8888876553
No 132
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=3.4e-13 Score=99.87 Aligned_cols=79 Identities=32% Similarity=0.465 Sum_probs=68.9
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR-- 91 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~-- 91 (208)
+.+.+.|.++..+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||..+.+.+|.+++.+|+.
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~--------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~ 98 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQN--------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT 98 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEE--------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC
T ss_pred ceEEEEEecCCceEeEEEEcC--------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 456788999999999999872 3478999999999999999999999999999999999999999999987
Q ss_pred CCCEEEEee
Q psy10226 92 AGNVVTLLG 100 (208)
Q Consensus 92 ~~~~v~l~~ 100 (208)
.+..+.|.+
T Consensus 99 ~G~~v~l~V 107 (126)
T 1wif_A 99 IGTVLQIKA 107 (126)
T ss_dssp SSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 356677743
No 133
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=2.7e-13 Score=94.64 Aligned_cols=78 Identities=27% Similarity=0.377 Sum_probs=67.1
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
..+.|.|.|. ..+|||++.+. ..+++|..|.++|+|+++|.|++||+|++|||..+ +.++++++++|+..
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~--------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~ 76 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE--------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA 76 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES--------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC
T ss_pred CcEEEEEEECCCCcEeEEEEec--------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC
Confidence 4556888774 77899999982 35899999999999999887999999999999999 99999999999987
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..+.|.+
T Consensus 77 ~~~v~l~v 84 (91)
T 2e7k_A 77 SGSVILKI 84 (91)
T ss_dssp CSSBCEEE
T ss_pred CCeEEEEE
Confidence 77766643
No 134
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.4e-13 Score=97.64 Aligned_cols=85 Identities=22% Similarity=0.459 Sum_probs=68.6
Q ss_pred CCCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCccccc-CCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy10226 10 DSEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASD-GRLQVNDVIHQVNHVTVVDVPHSAAVEA 88 (208)
Q Consensus 10 ~~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~-G~L~~gD~Il~Vng~~l~~~t~~~av~~ 88 (208)
..+++...|.+. +..+|||++.++.+. ..+++|..|.++|+|+++ | |++||+|++|||..+.++ +.+++.+
T Consensus 7 ~~~~~~~~v~~~-~~~~~G~~~~gg~~~-----~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~ 78 (100)
T 2edp_A 7 GGSFQYVPVQLQ-GGAPWGFTLKGGLEH-----CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALIL 78 (100)
T ss_dssp CCCCEEEEEECC-SCSCCCCCEEEEGGG-----TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHH
T ss_pred CCCcEEEEEEEC-CCCCcCEEEeccCCC-----CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHH
Confidence 445555555553 346899999987653 357999999999999999 6 999999999999999997 8999999
Q ss_pred HHhCCCEEEEeeee
Q psy10226 89 LKRAGNVVTLLGEK 102 (208)
Q Consensus 89 l~~~~~~v~l~~~~ 102 (208)
++..+..+.|.+.|
T Consensus 79 ~~~~~~~v~l~v~R 92 (100)
T 2edp_A 79 IKGSFRILKLIVRR 92 (100)
T ss_dssp HHTCCSSCEEEEEE
T ss_pred HHhCCCeEEEEEEe
Confidence 99877777775433
No 135
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=2.3e-13 Score=95.83 Aligned_cols=79 Identities=20% Similarity=0.336 Sum_probs=68.1
Q ss_pred cceEEEEEEeCC--CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 13 WEYEEIRLERGG--AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k~~--~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
...++|+|.|.. .+|||.+.+ ..+++|..|.++|+|+ +| |++||+|++|||..+.+++|.+++.+++
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~---------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~ 75 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE---------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILR 75 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS---------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHH
T ss_pred CccEEEEEEECCCCCcccEEEec---------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 445689999874 579999987 4578999999999996 77 9999999999999999999999999999
Q ss_pred hCCCEEEEeeee
Q psy10226 91 RAGNVVTLLGEK 102 (208)
Q Consensus 91 ~~~~~v~l~~~~ 102 (208)
..+..+.|.+.|
T Consensus 76 ~~g~~v~l~v~R 87 (96)
T 2edv_A 76 EAEDSLSITVVR 87 (96)
T ss_dssp HCSSCEEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 888888885544
No 136
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.42 E-value=1.4e-12 Score=102.71 Aligned_cols=76 Identities=39% Similarity=0.587 Sum_probs=66.9
Q ss_pred CcccEEEeccCC---CCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEeee
Q psy10226 25 AGLGFSIAGGTD---NPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLGE 101 (208)
Q Consensus 25 ~~lGf~i~gg~~---~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~~ 101 (208)
.+|||+|.||.+ .+......+++|..|.++|+|++ | |++||+|++|||..+.+++|.+++.+++..+..+.|.+.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 689999999874 33333467999999999999999 8 999999999999999999999999999999988888655
Q ss_pred e
Q psy10226 102 K 102 (208)
Q Consensus 102 ~ 102 (208)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 4
No 137
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.3e-12 Score=95.10 Aligned_cols=77 Identities=23% Similarity=0.448 Sum_probs=67.2
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.+.|.|.+...+|||++.++.+ .+++|..|.++++|+++| |++||+|++|||+.+.++++.+++.+++..+.
T Consensus 20 ~~~v~l~~~~~~lG~~~~~~~~-------~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~ 91 (117)
T 1uit_A 20 PRHVKVQKGSEPLGISIVSGEK-------GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCD 91 (117)
T ss_dssp CEEEEEECSSCCCCEEEEECTT-------SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCS
T ss_pred CEEEEEEeCCCCccEEEEccCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4589999888899999998543 489999999999999999 99999999999999999999988877777777
Q ss_pred EEEEe
Q psy10226 95 VVTLL 99 (208)
Q Consensus 95 ~v~l~ 99 (208)
.+.|.
T Consensus 92 ~v~l~ 96 (117)
T 1uit_A 92 TITIL 96 (117)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77774
No 138
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.41 E-value=1.9e-12 Score=102.53 Aligned_cols=86 Identities=30% Similarity=0.462 Sum_probs=74.5
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
...+.|.|.|. ..+|||+|.++.+. ..+++|..|.++|+|+++|.|+.||+|++|||+.+.+++|.+++.+++.
T Consensus 6 ~~~~~v~l~~~~~~~lG~~i~~~~~~-----~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (200)
T 2qt5_A 6 KGSTVVELMKKEGTTLGLTVSGGIDK-----DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN 80 (200)
T ss_dssp EEEEEEEEECCTTCCCCEEEECCTTS-----SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred CCCEEEEEEeCCCCCCCEEEecccCC-----CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34567888875 78899999998764 4578999999999999993399999999999999999999999999999
Q ss_pred CCCEEEEeeeee
Q psy10226 92 AGNVVTLLGEKN 103 (208)
Q Consensus 92 ~~~~v~l~~~~~ 103 (208)
.+..+.|...|.
T Consensus 81 ~g~~v~l~v~R~ 92 (200)
T 2qt5_A 81 VGERVVLEVEYE 92 (200)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEecc
Confidence 999888876654
No 139
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.12 E-value=2e-14 Score=104.41 Aligned_cols=81 Identities=32% Similarity=0.501 Sum_probs=70.2
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccc-cCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAAS-DGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~-~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
...+.|.|.|. ..+|||++.++.+. ..+++|..|.++|+|++ +| |++||+|++|||.++.+.++.+++.+|+
T Consensus 26 ~~~~~v~l~k~~~~glG~~l~~g~~~-----~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~ 99 (112)
T 2lob_A 26 QGIRKVLLLKEDHEGLGISITGGKEH-----GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 99 (112)
Confidence 44567888886 68899999987664 45799999999999999 77 9999999999999999999999999999
Q ss_pred hCCCEEEEe
Q psy10226 91 RAGNVVTLL 99 (208)
Q Consensus 91 ~~~~~v~l~ 99 (208)
..++.+.|.
T Consensus 100 ~~~~~v~l~ 108 (112)
T 2lob_A 100 QQRGEIEFE 108 (112)
Confidence 887777663
No 140
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.40 E-value=2.7e-12 Score=92.89 Aligned_cols=84 Identities=32% Similarity=0.533 Sum_probs=68.7
Q ss_pred CCCCcceEEEEEEe-CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy10226 9 GDSEWEYEEIRLER-GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVE 87 (208)
Q Consensus 9 ~~~~~~~~~v~l~k-~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~ 87 (208)
...+...++|.+.+ +..+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||+.+.++.+.+++.
T Consensus 10 ~~~~~~~~~v~~~~~~~~~lG~~l~~~~~~-----~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~ 83 (114)
T 1x5n_A 10 GNRENKEKKVFISLVGSRGLGCSISSGPIQ-----KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVN 83 (114)
T ss_dssp CCCCCSSEEEEECCCSSCCCCEEEEECCSS-----SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHH
T ss_pred CCCCCCcEEEEEEEcCCCceeEEEeecCCC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 34455556777766 477899999987543 4589999999999999999 9999999999999999999888888
Q ss_pred HHHhCCCEEEEe
Q psy10226 88 ALKRAGNVVTLL 99 (208)
Q Consensus 88 ~l~~~~~~v~l~ 99 (208)
+++.. ..+.|.
T Consensus 84 ~~~~~-~~v~l~ 94 (114)
T 1x5n_A 84 VLKSS-RSLTIS 94 (114)
T ss_dssp HHHHC-SSEEEE
T ss_pred HHhcC-CeEEEE
Confidence 88875 455553
No 141
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.40 E-value=2.4e-12 Score=94.97 Aligned_cols=82 Identities=23% Similarity=0.420 Sum_probs=71.4
Q ss_pred CCcceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 11 SEWEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 11 ~~~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.++..+.|.|.++..+|||.+.++.+ ..+++|..|.++|+|+++| |+.||+|++|||..+.++++.++..+|+
T Consensus 6 ~~~~~r~v~l~~~~~g~G~~l~~~~~------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (128)
T 2kjd_A 6 TMLRPRLCTMKKGPSGYGFNLHSDKS------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (128)
T ss_dssp TTCCCEEEEEECCSSSCCEEEEECSS------SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCCCcEEEEEecCCCcccEEEEecCC------CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45677889999998899999998553 3489999999999999999 9999999999999999999999999999
Q ss_pred hCCC-EEEEe
Q psy10226 91 RAGN-VVTLL 99 (208)
Q Consensus 91 ~~~~-~v~l~ 99 (208)
...+ .+.|.
T Consensus 79 ~~~~~~~~l~ 88 (128)
T 2kjd_A 79 AGGDETKLLV 88 (128)
T ss_dssp TTCSEEEEEE
T ss_pred hCCCCEEEEE
Confidence 8754 44454
No 142
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.40 E-value=1.8e-12 Score=92.26 Aligned_cols=84 Identities=37% Similarity=0.519 Sum_probs=67.0
Q ss_pred EEEEEeC----CCcccEEEeccCCCC-----C--CCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHH
Q psy10226 17 EIRLERG----GAGLGFSIAGGTDNP-----H--IGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAA 85 (208)
Q Consensus 17 ~v~l~k~----~~~lGf~i~gg~~~~-----~--~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~a 85 (208)
.|++.+. ..+|||++.|+.+.. . .....+++|..|.++|+|+++| |++||+|++|||..+.+++|+++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 4555553 225999999877631 0 0236789999999999999999 99999999999999999999999
Q ss_pred HHHHHhC-CCEEEEeee
Q psy10226 86 VEALKRA-GNVVTLLGE 101 (208)
Q Consensus 86 v~~l~~~-~~~v~l~~~ 101 (208)
+.+|+.. +..+.|...
T Consensus 86 ~~~l~~~~g~~v~l~v~ 102 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVT 102 (104)
T ss_dssp HHHHTCTTCSEEEEEEE
T ss_pred HHHHHhCCCCEEEEEEE
Confidence 9999864 567777543
No 143
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=3.1e-12 Score=89.13 Aligned_cols=71 Identities=30% Similarity=0.449 Sum_probs=61.0
Q ss_pred EEEEEEe--CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 16 EEIRLER--GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 16 ~~v~l~k--~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.+.+.+ ...+|||.+.+ + +|..|.++|+|+++| |+.||+|++|||..+.++++.+++.+|++.+
T Consensus 13 ~~~~i~~~~~~~~lG~~~~~-----------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 79 (90)
T 1y7n_A 13 TTVLIRRPDLRYQLGFSVQN-----------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAV 79 (90)
T ss_dssp EEEEEEESSTTSCCCEEEET-----------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred ceEEEEeCCCccccCeEecC-----------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3344444 36789999865 2 899999999999999 9999999999999999999999999999888
Q ss_pred CEEEEe
Q psy10226 94 NVVTLL 99 (208)
Q Consensus 94 ~~v~l~ 99 (208)
..+.|.
T Consensus 80 ~~v~l~ 85 (90)
T 1y7n_A 80 GEIHMK 85 (90)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 887774
No 144
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.38 E-value=5.4e-13 Score=93.44 Aligned_cols=74 Identities=28% Similarity=0.447 Sum_probs=64.6
Q ss_pred eCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEeee
Q psy10226 22 RGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLGE 101 (208)
Q Consensus 22 k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~~ 101 (208)
++..+|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||..+.+++|.++..+|+..+..+.|...
T Consensus 13 ~~~~~lG~~l~~g~~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 86 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDF-----HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLD 86 (94)
T ss_dssp CSSSCCSBCCEEETTT-----TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred cCCCCccEEEecccCC-----CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 3567899999987663 4589999999999999999 999999999999999999999999999987777777543
No 145
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.36 E-value=4e-12 Score=100.45 Aligned_cols=90 Identities=22% Similarity=0.235 Sum_probs=76.6
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
..+.++|.|.|+ ..+|||++.++.+... ....+++|..|.++|||+++|+|+.||+|++|||..+.+++|.++..+|+
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~-~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 82 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATE-TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 82 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSS-SCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHH
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCC-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356778999997 6899999999876432 12568999999999999999999999999999999999999999999999
Q ss_pred hC--CCEEEEeeee
Q psy10226 91 RA--GNVVTLLGEK 102 (208)
Q Consensus 91 ~~--~~~v~l~~~~ 102 (208)
.. +..+.|...|
T Consensus 83 ~~~~g~~v~l~v~R 96 (196)
T 1p1d_A 83 DSSITSKVTLEIEF 96 (196)
T ss_dssp TCCSSSEEEEEEEE
T ss_pred hCCCCCeEEEEEEe
Confidence 87 6778776544
No 146
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.36 E-value=2.9e-12 Score=96.32 Aligned_cols=89 Identities=35% Similarity=0.487 Sum_probs=70.9
Q ss_pred cceEEEEEEeCC----CcccEEEeccCCCCC-----C--CCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCC
Q psy10226 13 WEYEEIRLERGG----AGLGFSIAGGTDNPH-----I--GDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVP 81 (208)
Q Consensus 13 ~~~~~v~l~k~~----~~lGf~i~gg~~~~~-----~--~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t 81 (208)
...+.|.|.+.+ .+|||++.+|.+... . ....+++|..|.++|||+++| |++||+|++|||..+.+++
T Consensus 22 ~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~ 100 (139)
T 2vz5_A 22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVT 100 (139)
T ss_dssp CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred CceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCC
Confidence 445677887742 369999998765210 0 125699999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHh-CCCEEEEeeee
Q psy10226 82 HSAAVEALKR-AGNVVTLLGEK 102 (208)
Q Consensus 82 ~~~av~~l~~-~~~~v~l~~~~ 102 (208)
+.+++.+|+. .+..+.|.+.|
T Consensus 101 ~~~~~~~l~~~~g~~v~l~v~R 122 (139)
T 2vz5_A 101 HDQARKRLTKRSEEVVRLLVTR 122 (139)
T ss_dssp HHHHHHHHCCTTCSEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEEE
Confidence 9999999986 45677775443
No 147
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.35 E-value=7.4e-12 Score=90.25 Aligned_cols=81 Identities=32% Similarity=0.478 Sum_probs=68.9
Q ss_pred eEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCC-CCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 15 YEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRL-QVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 15 ~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L-~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
+++|.|.|+ ..+|||.+.+..+ ..+++|..|.++|+|+++| | +.||+|++|||..+.++++.++..+|+..
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~------~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGI 74 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS------SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred EEEEEEEcCCCCceeEEEEecCC------CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 568899886 6889999998543 4589999999999999999 6 99999999999999999999999999874
Q ss_pred -CCEEEEeeee
Q psy10226 93 -GNVVTLLGEK 102 (208)
Q Consensus 93 -~~~v~l~~~~ 102 (208)
+..+.|...+
T Consensus 75 ~g~~v~l~v~R 85 (112)
T 1qau_A 75 ASETHVVLILR 85 (112)
T ss_dssp CSSSEEEEEEE
T ss_pred CCCcEEEEEEe
Confidence 4667775433
No 148
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=8.7e-13 Score=93.51 Aligned_cols=79 Identities=39% Similarity=0.642 Sum_probs=64.4
Q ss_pred cceEEEEEEe--CCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 13 WEYEEIRLER--GGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k--~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
-+.++|.|.| ...+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||+.+.++.+.+++..++
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 80 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEH-----GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALK 80 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTT-----TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSS
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhc
Confidence 4566777877 367899999987653 4589999999999999999 9999999999999999999987777665
Q ss_pred hCCCEEEE
Q psy10226 91 RAGNVVTL 98 (208)
Q Consensus 91 ~~~~~v~l 98 (208)
.. ..+.|
T Consensus 81 ~~-~~v~l 87 (101)
T 1uez_A 81 GS-KKLVL 87 (101)
T ss_dssp SS-SSCCE
T ss_pred CC-CeEEE
Confidence 43 33444
No 149
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.34 E-value=8.4e-12 Score=91.98 Aligned_cols=75 Identities=33% Similarity=0.540 Sum_probs=64.3
Q ss_pred EEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEE
Q psy10226 20 LERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVT 97 (208)
Q Consensus 20 l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~ 97 (208)
..+.+.+|||.+.++.+ .+++|..|.++|||+++| |+.||+|++|||..+.++++++++.+|++ .+..+.
T Consensus 34 ~~~~~~~lG~~l~~~~~-------~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~ 105 (124)
T 3tsv_A 34 KFRKGDSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 105 (124)
T ss_dssp EEECSSCCCEEEEECTT-------SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEE
T ss_pred EcCCCCceeEEEecCCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 33456789999998543 489999999999999999 99999999999999999999999998884 677888
Q ss_pred Eeeee
Q psy10226 98 LLGEK 102 (208)
Q Consensus 98 l~~~~ 102 (208)
|.+.+
T Consensus 106 l~v~R 110 (124)
T 3tsv_A 106 ILAQK 110 (124)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76544
No 150
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.32 E-value=1.4e-12 Score=92.96 Aligned_cols=77 Identities=30% Similarity=0.471 Sum_probs=65.3
Q ss_pred EEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCE
Q psy10226 16 EEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNV 95 (208)
Q Consensus 16 ~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~ 95 (208)
++|.+ ++..+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||..+.++++.+++.+|+..+..
T Consensus 7 ~~v~~-~~~~~lG~~l~~g~~~-----~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 79 (103)
T 1v5l_A 7 GNVVL-PGPAPWGFRLSGGIDF-----NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQ 79 (103)
T ss_dssp BCCEE-ESSSCCSBCCEEETTT-----TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSE
T ss_pred EEEEE-cCCCCcCEEEeccccC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 34444 4567899999987653 3589999999999999999 999999999999999999999999998877767
Q ss_pred EEEe
Q psy10226 96 VTLL 99 (208)
Q Consensus 96 v~l~ 99 (208)
+.|.
T Consensus 80 v~l~ 83 (103)
T 1v5l_A 80 LCLK 83 (103)
T ss_dssp EECE
T ss_pred EEEE
Confidence 7663
No 151
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=6.5e-12 Score=91.35 Aligned_cols=80 Identities=21% Similarity=0.351 Sum_probs=66.1
Q ss_pred cceEEEEEEeCCC---cccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 13 WEYEEIRLERGGA---GLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 13 ~~~~~v~l~k~~~---~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
.+.+.|.|.|... +|||+|.+..+. +..+++|..|.++++|+++| |++||+|++|||..+..++|.++..+|
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~----~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED----GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFL 88 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET----TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHH
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC----CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 4577899999743 799999874432 12589999999999999999 999999999999999999999998888
Q ss_pred HhCCCEEEEe
Q psy10226 90 KRAGNVVTLL 99 (208)
Q Consensus 90 ~~~~~~v~l~ 99 (208)
+.. .+.|.
T Consensus 89 ~~~--~v~l~ 96 (114)
T 2d8i_A 89 SQP--SLGLL 96 (114)
T ss_dssp TSS--EEEEE
T ss_pred hCC--cEEEE
Confidence 753 55553
No 152
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.32 E-value=6.9e-12 Score=111.38 Aligned_cols=79 Identities=30% Similarity=0.561 Sum_probs=71.2
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--C
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--A 92 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~ 92 (208)
.+.|.|.|+ .+|||.+.|+.+ .++||..|.+||||+++| |++||+|++|||+.+.+++|++++.+|+. .
T Consensus 2 ~r~V~l~k~-~~lG~~i~gg~~-------~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~ 72 (468)
T 3shw_A 2 MKLVKFRKG-DSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 72 (468)
T ss_dssp EEEEEEECC-SSCCEEEEEETT-------TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred ceEEEEecC-CccceEEEccCc-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 467888885 889999998643 489999999999999999 99999999999999999999999999998 7
Q ss_pred CCEEEEeeee
Q psy10226 93 GNVVTLLGEK 102 (208)
Q Consensus 93 ~~~v~l~~~~ 102 (208)
+..+.|.+.+
T Consensus 73 g~~v~L~V~r 82 (468)
T 3shw_A 73 GEEVTILAQK 82 (468)
T ss_dssp TSEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 8899887655
No 153
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.32 E-value=9.1e-13 Score=95.44 Aligned_cols=74 Identities=24% Similarity=0.318 Sum_probs=64.5
Q ss_pred eEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 15 YEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 15 ~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
.+.|.|.|+..+|||.+.+ ..+++|..|.++++|+++| |+.||+|++|||..+.++++++++++|+..++
T Consensus 16 ~r~v~l~~~~~~~G~~l~~---------~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~ 85 (111)
T 1vae_A 16 PRGIHFTVEEGDLGFTLRG---------NTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGG 85 (111)
T ss_dssp CCCCCEECCSSCCSCCEES---------SSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTT
T ss_pred CeEEEEEcCCCcccEEEeC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3468899988899999976 3468999999999999999 99999999999999999999999999987654
Q ss_pred -EEEE
Q psy10226 95 -VVTL 98 (208)
Q Consensus 95 -~v~l 98 (208)
.+.|
T Consensus 86 ~~v~l 90 (111)
T 1vae_A 86 EEVEM 90 (111)
T ss_dssp SEECE
T ss_pred ceEEE
Confidence 3555
No 154
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.31 E-value=1.2e-11 Score=98.03 Aligned_cols=85 Identities=25% Similarity=0.338 Sum_probs=73.0
Q ss_pred CcceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 12 EWEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 12 ~~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+..+++.+.+. ..+|||.+..+ ..++||..|.+||+|+++|+|+.||+|++|||+.+.+++|.+++.+|+
T Consensus 111 ~~~~~~v~l~~~~~~~lG~~~~~~--------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 182 (206)
T 3r0h_A 111 ELEKFNVDLMKKAGKELGLSLSPN--------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK 182 (206)
T ss_dssp CEEEEEEEEECCTTCCCCEEEEEC--------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCcEEEEEEecCCCCccCeEEEcC--------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345567777775 46899999852 358999999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEeeeeeC
Q psy10226 91 RAGNVVTLLGEKNL 104 (208)
Q Consensus 91 ~~~~~v~l~~~~~~ 104 (208)
..+..+.|.+.|..
T Consensus 183 ~~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 183 GANGKVSMEVTRPK 196 (206)
T ss_dssp TCCSEEEEEEEEEC
T ss_pred cCCCeEEEEEEeCC
Confidence 99999988766643
No 155
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.28 E-value=1.1e-12 Score=114.32 Aligned_cols=82 Identities=24% Similarity=0.396 Sum_probs=67.7
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
..++|.|.|. +++|||+|.+... .....+++|..|.+||||+++|+|+.||+|++|||+++.+++|.+++.+|+..
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~---g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 280 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGW---GSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGL 280 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC------CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTC
T ss_pred cceEEEEECCCCCceeEEEEecCC---CCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 4568999886 7889999998432 11244689999999999999999999999999999999999999999999985
Q ss_pred C--CEEEE
Q psy10226 93 G--NVVTL 98 (208)
Q Consensus 93 ~--~~v~l 98 (208)
+ ..+.|
T Consensus 281 ~~~~~v~l 288 (388)
T 3suz_A 281 KNQTQVKL 288 (388)
T ss_dssp TTCSCEEE
T ss_pred cCCCcccc
Confidence 3 33555
No 156
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.28 E-value=4.8e-11 Score=82.75 Aligned_cols=75 Identities=19% Similarity=0.362 Sum_probs=64.5
Q ss_pred eEEEEEEeC--CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 15 YEEIRLERG--GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 15 ~~~v~l~k~--~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
...|.+.+. ...|||.+.. +++|..|.++|+|+++|+|+.||+|++|||..+.++++.++..+|+..
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~~-----------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 71 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLAS-----------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS 71 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEEE-----------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred cEEEEEEeCCCCCCCCEEEeC-----------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345666664 4679998763 789999999999999999999999999999999999999999999987
Q ss_pred CCEEEEee
Q psy10226 93 GNVVTLLG 100 (208)
Q Consensus 93 ~~~v~l~~ 100 (208)
+..+.|..
T Consensus 72 ~~~v~l~v 79 (92)
T 3cyy_A 72 KGKLKMVV 79 (92)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEE
Confidence 77777754
No 157
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.27 E-value=2.5e-11 Score=85.98 Aligned_cols=78 Identities=22% Similarity=0.271 Sum_probs=66.9
Q ss_pred cceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh-
Q psy10226 13 WEYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR- 91 (208)
Q Consensus 13 ~~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~- 91 (208)
+....+.|.+...+|||.+... ..+.+|..|.+||||+++| |++||+|++|||..+...++++++..+++
T Consensus 16 ~~~~~l~l~~~~~g~G~~l~~~--------~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~ 86 (101)
T 3qik_A 16 ILAKRLLILPQEEDYGFDIEEK--------NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQS 86 (101)
T ss_dssp TTEEEEEECCCSSSSSEEEEEE--------TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred eecCeEEEEeCCCcccEEEEcc--------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHh
Confidence 4556778888888999999862 3478999999999999999 99999999999999998999999999987
Q ss_pred --CCCEEEEe
Q psy10226 92 --AGNVVTLL 99 (208)
Q Consensus 92 --~~~~v~l~ 99 (208)
.+..+.|.
T Consensus 87 ~~~g~~v~LL 96 (101)
T 3qik_A 87 FCSRRPLRLL 96 (101)
T ss_dssp HHTTCCEEEE
T ss_pred hccCCeEEEE
Confidence 47777663
No 158
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.25 E-value=4.8e-11 Score=94.35 Aligned_cols=88 Identities=30% Similarity=0.512 Sum_probs=73.8
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
....|.+.+...+|||.+.++.... .....+++|..|.++|+|+++|+|++||+|++|||..+.++++++++++|+..+
T Consensus 106 ~~~~v~l~~~~~~lG~~l~~g~~~~-~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 184 (200)
T 2qt5_A 106 RTVEVTLHKEGNTFGFVIRGGAHDD-RNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 184 (200)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSS-TTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred eEEEEEEecCCCCeEEEEECCCCCC-ccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5667777777788999999865421 112468999999999999999999999999999999999999999999999988
Q ss_pred CEEEEeeee
Q psy10226 94 NVVTLLGEK 102 (208)
Q Consensus 94 ~~v~l~~~~ 102 (208)
..+.|...|
T Consensus 185 ~~v~l~v~R 193 (200)
T 2qt5_A 185 QEATLLIEY 193 (200)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 888886544
No 159
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=5.9e-11 Score=87.63 Aligned_cols=78 Identities=36% Similarity=0.598 Sum_probs=64.0
Q ss_pred ceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 14 EYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 14 ~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
+.+++.+..+ ..+|||.+.++.+. ..+++|..|.++|+|+++| |++||+|++|||..+.++++.+++..++..
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~-----~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEY-----GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTT-----TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred cEEEEEEEECCCCccCEEEECcccC-----CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4456666654 46799999986543 3589999999999999999 999999999999999999998888887764
Q ss_pred CCEEEE
Q psy10226 93 GNVVTL 98 (208)
Q Consensus 93 ~~~v~l 98 (208)
..+.|
T Consensus 94 -~~v~l 98 (128)
T 1uf1_A 94 -RHLIL 98 (128)
T ss_dssp -SEEEE
T ss_pred -CeEEE
Confidence 45555
No 160
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.24 E-value=7.7e-11 Score=81.47 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=65.0
Q ss_pred cceEEEEEEeC-C--CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy10226 13 WEYEEIRLERG-G--AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEAL 89 (208)
Q Consensus 13 ~~~~~v~l~k~-~--~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l 89 (208)
+..+.+.+.+. . ..|||.+... ..+++|..|.++|||+++| |+.||+|++|||..+.+.++.++..+|
T Consensus 2 ~~~~~~~~~~~~~~~~~lG~~~~~~--------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2eaq_A 2 FSDMRISINQTPGKSLDFGFTIKWD--------IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAM 72 (90)
T ss_dssp EEEEEEEEECCTTCSSCCSEEEEEE--------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHH
T ss_pred CCceEEEEEecCCCCCcccEEEEec--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 45567777775 2 3699998752 3489999999999999999 999999999999999888899999888
Q ss_pred Hh--CCCEEEEeee
Q psy10226 90 KR--AGNVVTLLGE 101 (208)
Q Consensus 90 ~~--~~~~v~l~~~ 101 (208)
+. .+..+.|...
T Consensus 73 ~~~~~g~~v~l~v~ 86 (90)
T 2eaq_A 73 AKAQETGHLVMDVR 86 (90)
T ss_dssp HHHHHHTEEEEEEE
T ss_pred HhcCCCCEEEEEEE
Confidence 84 4677776543
No 161
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.24 E-value=4.2e-11 Score=104.42 Aligned_cols=80 Identities=30% Similarity=0.555 Sum_probs=69.4
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR-- 91 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~-- 91 (208)
+.+.|.+.++ .+|||++.++.+ .+++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+.
T Consensus 9 ~~~~v~~~k~-~~lG~~i~gg~~-------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~ 79 (391)
T 3tsz_A 9 SMKLVKFRKG-DSVGLRLAGGND-------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 79 (391)
T ss_dssp CEEEEEEECC-SSCCEEEEEETT-------TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CcEEEEeecC-CceeEEEEecCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc
Confidence 3456777765 479999998653 489999999999999999 99999999999999999999999999995
Q ss_pred CCCEEEEeeee
Q psy10226 92 AGNVVTLLGEK 102 (208)
Q Consensus 92 ~~~~v~l~~~~ 102 (208)
.+..+.|...+
T Consensus 80 ~g~~v~l~v~r 90 (391)
T 3tsz_A 80 KGEEVTILAQK 90 (391)
T ss_dssp TTSEEEEEEEE
T ss_pred CCCeEEEEEee
Confidence 78888886554
No 162
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.23 E-value=1.5e-11 Score=90.76 Aligned_cols=80 Identities=33% Similarity=0.486 Sum_probs=68.1
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCC-CCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRL-QVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L-~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.+.++|.|.|+ ..+|||.+.+..+ ..+++|..|.++|+|+++| | +.||+|++|||+.+.++++.++..+|+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~------~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVS------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLR 79 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTT------SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHH
T ss_pred CceEEEEEEeCCCCcEeEEEEecCC------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778999997 4899999998543 4589999999999999999 6 999999999999999999999999998
Q ss_pred hC-CCEEEEe
Q psy10226 91 RA-GNVVTLL 99 (208)
Q Consensus 91 ~~-~~~v~l~ 99 (208)
.. +..+.|.
T Consensus 80 ~~~g~~v~l~ 89 (127)
T 1b8q_A 80 GIASETHVVL 89 (127)
T ss_dssp SCCSSCEEEE
T ss_pred hCCCCeEEEE
Confidence 64 4566663
No 163
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.22 E-value=7.1e-11 Score=110.30 Aligned_cols=88 Identities=39% Similarity=0.624 Sum_probs=77.9
Q ss_pred ceEEEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCC
Q psy10226 14 EYEEIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAG 93 (208)
Q Consensus 14 ~~~~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~ 93 (208)
+.+.|.|.+...+|||++.++.+ ..+++|..|.+||+|+++|+|++||+|++|||.++.+++|++++.+|++.+
T Consensus 307 ~~~~v~l~~~~~~lG~~i~~~~~------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~ 380 (721)
T 2xkx_A 307 EPRRIVIHRGSTGLGFNIVGGED------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 380 (721)
T ss_pred ceEEEEEEECCCCccEEEeccCC------CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 56788999988889999998544 358999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeeeeeCCCC
Q psy10226 94 NVVTLLGEKNLENV 107 (208)
Q Consensus 94 ~~v~l~~~~~~~~~ 107 (208)
..+.|++.+....+
T Consensus 381 ~~v~L~v~r~~~~~ 394 (721)
T 2xkx_A 381 QTVTIIAQYKPEEY 394 (721)
T ss_pred CeEEEEEEeCchhh
Confidence 99988877665543
No 164
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.22 E-value=1.2e-10 Score=78.64 Aligned_cols=66 Identities=20% Similarity=0.381 Sum_probs=59.1
Q ss_pred CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEee
Q psy10226 24 GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLG 100 (208)
Q Consensus 24 ~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~ 100 (208)
...|||.+.+ +++|..|.++|+|+++|+|+.||+|++|||..+.++++.++..+|+..++.+.|..
T Consensus 12 ~~~~g~~~~~-----------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 12 NEEYGLRLAS-----------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp TCCCCEEEEE-----------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCEEEeC-----------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 5679998874 78999999999999999999999999999999999999999999998777777644
No 165
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=4.9e-11 Score=87.66 Aligned_cols=85 Identities=35% Similarity=0.510 Sum_probs=66.8
Q ss_pred CCCCcceEEEEEEeC--CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHH
Q psy10226 9 GDSEWEYEEIRLERG--GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAV 86 (208)
Q Consensus 9 ~~~~~~~~~v~l~k~--~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av 86 (208)
...+++.+.+.+.+. ..+|||++....+.. ...+++|..|.++++|+++|+|++||+|++|||+.+.. +.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~---~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~ 88 (124)
T 1wh1_A 14 DREELELEEVDLYRMNSQDKLGLTVCYRTDDE---DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAV 88 (124)
T ss_dssp CCSSCEECCBCCCCSSTTCCCCEEEECCCCCS---SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHH
T ss_pred CcCcceEEEEEEEecCCCCcccEEEEecCCCC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHH
Confidence 345677778888886 347999999855431 14689999999999999999999999999999999984 77888
Q ss_pred HHHHhC-CCEEEE
Q psy10226 87 EALKRA-GNVVTL 98 (208)
Q Consensus 87 ~~l~~~-~~~v~l 98 (208)
.+|+.. +..+.|
T Consensus 89 ~~l~~~~g~~v~l 101 (124)
T 1wh1_A 89 ALLTSEENKNFSL 101 (124)
T ss_dssp HHHTCSSCCSCCE
T ss_pred HHHHhCCCCEEEE
Confidence 877753 344444
No 166
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.16 E-value=2.8e-10 Score=87.53 Aligned_cols=79 Identities=20% Similarity=0.266 Sum_probs=67.7
Q ss_pred cceEEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy10226 13 WEYEEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR 91 (208)
Q Consensus 13 ~~~~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~ 91 (208)
.+.++|.|.|+ ..+|||.+... ..+++|..|.++|||+++| |+.||+|++|||..+.+++++.+..+++.
T Consensus 3 ~~~r~v~l~k~~~~~lG~~~~~~--------~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (166)
T 1w9e_A 3 MDPREVILCKDQDGKIGLRLKSI--------DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQ 73 (166)
T ss_dssp CCCEEEEEECCTTSCCSEEEEEE--------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCcEeEEEEeC--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 45788999996 66799999873 3589999999999999999 99999999999999999998778888876
Q ss_pred CC-CEEEEee
Q psy10226 92 AG-NVVTLLG 100 (208)
Q Consensus 92 ~~-~~v~l~~ 100 (208)
.. ..+.|..
T Consensus 74 ~~~~~v~l~v 83 (166)
T 1w9e_A 74 AFGEKITMTI 83 (166)
T ss_dssp CCSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 54 4777765
No 167
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.99 E-value=2.1e-09 Score=78.43 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=59.7
Q ss_pred EEEEEe---C-CCcccEEEeccCCCCCCCCCCcEEEEEECC--CCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy10226 17 EIRLER---G-GAGLGFSIAGGTDNPHIGDDTSIYITKLIP--GGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK 90 (208)
Q Consensus 17 ~v~l~k---~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~--gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~ 90 (208)
.|+|.+ . .+.|||.+.-.... .....+++|..|.+ +++|+++| |+.||+|++|||..+..++|.++..+|+
T Consensus 15 ~v~l~~~~~~~~g~~G~~v~l~~~~--~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 15 SVTLISMPATTECRRGFSVTVESAS--SNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp EEEEEEECSCSSSSCSSEEEEECTT--SSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred eeEEeccCCccCCCceEEEEecccc--ccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 455544 3 23466666532111 11246899999999 99999999 9999999999999999999999999988
Q ss_pred hCCCEEEEe
Q psy10226 91 RAGNVVTLL 99 (208)
Q Consensus 91 ~~~~~v~l~ 99 (208)
..+..+.|.
T Consensus 92 ~~g~~v~l~ 100 (118)
T 2yub_A 92 QTSQTLQLL 100 (118)
T ss_dssp CCSSCEEEE
T ss_pred hCCCEEEEE
Confidence 765566663
No 168
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.99 E-value=2.1e-09 Score=84.69 Aligned_cols=83 Identities=18% Similarity=0.348 Sum_probs=68.0
Q ss_pred EEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 16 EEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 16 ~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
+.+.+.+. ...|||++....... ...+++|..|.++|+|+++|+|+.||+|++|||..+.++++.++.++|++.+.
T Consensus 109 ~~v~l~~~~~~~lG~~~~~~~~~~---~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 185 (196)
T 1p1d_A 109 FHVKLPKKHSVELGITISSPSSRK---PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCED 185 (196)
T ss_dssp EEEEECCCSSCCCCCEEECSCSSS---TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTT
T ss_pred EEEEecCCCCCCcCEEEECCCCCC---CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45566543 456999998754421 14589999999999999999999999999999999999999999999998877
Q ss_pred EEEEeee
Q psy10226 95 VVTLLGE 101 (208)
Q Consensus 95 ~v~l~~~ 101 (208)
.+.|...
T Consensus 186 ~v~l~v~ 192 (196)
T 1p1d_A 186 LVKLKIR 192 (196)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 7777543
No 169
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.64 E-value=2.1e-07 Score=71.23 Aligned_cols=71 Identities=25% Similarity=0.436 Sum_probs=59.4
Q ss_pred EEEEEEeC-CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 16 EEIRLERG-GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 16 ~~v~l~k~-~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
+++.|.++ ...|||.+.. + +|..|.++++|+++| |+.||+|++|||..+.++.+.++...+++.+.
T Consensus 90 ~~v~l~~~~~~~lG~~~~~-----------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~ 156 (166)
T 1w9e_A 90 RTITMHKDSTGHVGFIFKN-----------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGT 156 (166)
T ss_dssp EEEEEECCTTSCCSEEEET-----------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred EEEEEecCCCCcEeEEEeC-----------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCC
Confidence 45666543 4568888762 3 899999999999999 99999999999999999999999888888888
Q ss_pred EEEEe
Q psy10226 95 VVTLL 99 (208)
Q Consensus 95 ~v~l~ 99 (208)
.+.+.
T Consensus 157 ~~~l~ 161 (166)
T 1w9e_A 157 VVTIT 161 (166)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77663
No 170
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.54 E-value=9.1e-09 Score=89.51 Aligned_cols=63 Identities=30% Similarity=0.435 Sum_probs=0.0
Q ss_pred CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEe
Q psy10226 24 GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLL 99 (208)
Q Consensus 24 ~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~ 99 (208)
..+|||.+.+ .+|..|.+||+|+++| |++||+|++|||.++.+++|++++.+|+++++.+.|.
T Consensus 307 ~~~lG~~i~~------------g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~ 369 (388)
T 3suz_A 307 KYQLGFSVQN------------GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMK 369 (388)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CCccceEEec------------CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 3457777654 1899999999999999 9999999999999999999999999999988887773
No 171
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.40 E-value=8.6e-07 Score=63.46 Aligned_cols=53 Identities=25% Similarity=0.372 Sum_probs=45.2
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEe
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLL 99 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~ 99 (208)
..+++|..|.++|+|+++| |++||.|++|||..+.+ ..+...+|+. +..+.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~ 86 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQ 86 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEE
Confidence 4689999999999999999 99999999999999984 5777777776 5566664
No 172
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.37 E-value=5.9e-07 Score=71.46 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=45.9
Q ss_pred CCcEEEEEECCCCcccccCCCCCC-CEEEEECCeecCCCCHHHHHHHHHhCCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVN-DVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~g-D~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~ 100 (208)
..+++|..|.++|||+++| |+.| |+|++|||..+..+.+....-+....+..+.|..
T Consensus 15 ~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 72 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLI 72 (209)
T ss_dssp SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEE
Confidence 5689999999999999999 9999 9999999999998876544322334566777754
No 173
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.35 E-value=6e-07 Score=62.46 Aligned_cols=54 Identities=19% Similarity=0.327 Sum_probs=44.4
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA--GNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~--~~~v~l~~ 100 (208)
..+++|..|.++|||++ | |+.||+|++|||..+.+ ..+...+|+.. +..+.|..
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v 59 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTF 59 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEE
Confidence 45799999999999999 8 99999999999999975 46777777763 56666643
No 174
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.34 E-value=2.4e-07 Score=64.26 Aligned_cols=51 Identities=20% Similarity=0.298 Sum_probs=41.7
Q ss_pred cEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCEEEEe
Q psy10226 45 SIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA--GNVVTLL 99 (208)
Q Consensus 45 ~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~--~~~v~l~ 99 (208)
+++|..|.++|||++ | |++||+|++|||..+.+ ..++..+|+.. +..+.|.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~ 54 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLK 54 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEE
Confidence 578889999999999 8 99999999999999985 46777777654 5566663
No 175
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.33 E-value=1.7e-06 Score=75.02 Aligned_cols=71 Identities=24% Similarity=0.365 Sum_probs=58.0
Q ss_pred CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh-CCCEEEEee
Q psy10226 24 GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR-AGNVVTLLG 100 (208)
Q Consensus 24 ~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~-~~~~v~l~~ 100 (208)
..++|+.+.... ....+++|..|.++|||+++| |++||+|++|||..+.+++..++..+|+. .+..+.|.+
T Consensus 84 ~~giG~~~~~~~-----~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v 155 (388)
T 1fc6_A 84 VTGVGLEITYDG-----GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVL 155 (388)
T ss_dssp CBBCSEEEEECT-----TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEE
T ss_pred eEEEEEEEEEee-----cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE
Confidence 357899887521 113579999999999999999 99999999999999999998999988874 456676644
No 176
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.30 E-value=2.6e-06 Score=59.78 Aligned_cols=54 Identities=15% Similarity=0.253 Sum_probs=44.7
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
..+++|..|.++|||+. | |+.||+|++|||..+.. ..+...+|.. .+..+.|..
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v 61 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINY 61 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEE
Confidence 56899999999999995 8 99999999999999975 4677777775 356777743
No 177
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.28 E-value=3e-06 Score=62.77 Aligned_cols=54 Identities=17% Similarity=0.251 Sum_probs=45.1
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
..+++|..|.++|||+ +| |+.||+|++|||..+.++ .+...+|.. .+..+.|..
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v 111 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITY 111 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEE
Confidence 4689999999999999 99 999999999999999864 566677775 367777753
No 178
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.24 E-value=2.7e-06 Score=60.76 Aligned_cols=53 Identities=28% Similarity=0.437 Sum_probs=43.8
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEe
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLL 99 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~ 99 (208)
..+++|..|.++++|+++| |+.||+|++|||..+.. ..+....|+ .+..+.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~ 86 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLE 86 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEE
Confidence 4689999999999999999 99999999999999985 466666664 35556554
No 179
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.17 E-value=2.5e-06 Score=58.45 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=42.4
Q ss_pred cEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC-CCEEEEe
Q psy10226 45 SIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA-GNVVTLL 99 (208)
Q Consensus 45 ~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~-~~~v~l~ 99 (208)
.++|..|.++++|+++| |+.||+|++|||..+.+ ..+....|... +..+.|.
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~ 57 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALE 57 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEE
Confidence 45788999999999999 99999999999999985 56777777753 5566664
No 180
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.16 E-value=5.6e-06 Score=57.59 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=41.0
Q ss_pred EEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC-C-CEEEEe
Q psy10226 47 YITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA-G-NVVTLL 99 (208)
Q Consensus 47 ~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~-~-~~v~l~ 99 (208)
+|..|.++|+|+++| |+.||+|++|||..+.. +.++...|... + ..+.|.
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~ 56 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTIT 56 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEE
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEE
Confidence 788999999999999 99999999999999985 46777777653 2 456664
No 181
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.14 E-value=8.5e-06 Score=71.72 Aligned_cols=55 Identities=29% Similarity=0.341 Sum_probs=48.2
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~ 100 (208)
..+++|..|.++|+|+++| |+.||+|++|||..+.. ++++.++|++.+..+.|.+
T Consensus 362 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v 416 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQI 416 (436)
T ss_pred CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEE
Confidence 3589999999999999999 99999999999999974 6888999988777777743
No 182
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.10 E-value=2.8e-06 Score=74.17 Aligned_cols=72 Identities=21% Similarity=0.243 Sum_probs=53.1
Q ss_pred CCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEeeee
Q psy10226 24 GAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLGEK 102 (208)
Q Consensus 24 ~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~~~ 102 (208)
..||||.+....+.. ..-.++|..|.+||||+++| |+.||+|++|||..+.++. +..+|+..+..+.|...|
T Consensus 73 ~~G~~~~l~~~~~~~---~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R 144 (403)
T 3k50_A 73 SYGFDYTLYKVLDND---TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYK 144 (403)
T ss_dssp BCSEEEEEEECTTCS---SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEE
T ss_pred ccceEEEEEEcCCCC---cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEe
Confidence 456777776532210 11247899999999999999 9999999999999999875 556666666677775433
No 183
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.06 E-value=3.3e-06 Score=57.65 Aligned_cols=53 Identities=15% Similarity=0.052 Sum_probs=41.7
Q ss_pred cEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 45 SIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 45 ~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
++.|..+.++++|+++| |+.||.|++|||..+.+ +.+...++.. .+..+.|..
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v 74 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTV 74 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEEEE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEE
Confidence 66788888888999999 99999999999999985 4566666664 355666643
No 184
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.00 E-value=1.6e-05 Score=56.14 Aligned_cols=53 Identities=15% Similarity=0.036 Sum_probs=40.1
Q ss_pred cEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 45 SIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 45 ~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
+++|....++++|+++| |++||.|++|||..+..+. +...++.. .+..+.|..
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v 92 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTV 92 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEE
Confidence 56677778888889999 9999999999999999764 34444543 456666643
No 185
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.00 E-value=1.3e-05 Score=67.61 Aligned_cols=55 Identities=27% Similarity=0.394 Sum_probs=45.9
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
..+++|..|.+++||+++| |+.||+|++|||..+.++ .+...+|.. .+..+.|..
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v 297 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTF 297 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEE
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEE
Confidence 4589999999999999999 999999999999999864 566667764 467777754
No 186
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.94 E-value=2e-05 Score=67.35 Aligned_cols=56 Identities=18% Similarity=0.360 Sum_probs=47.6
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEeee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLGE 101 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~~ 101 (208)
..+++|..|.++|||+++| |+.||.|++|||..+.. ..+...+|+. .+..+.|...
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~ 319 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKLGLL 319 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEEEEE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEE
Confidence 4689999999999999999 99999999999999984 5677777775 5778887543
No 187
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.92 E-value=2.3e-05 Score=62.19 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=50.5
Q ss_pred CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCC-CCEEEEECCeecCCCCHHHHHHHHHhC-CCEEEEe
Q psy10226 25 AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQV-NDVIHQVNHVTVVDVPHSAAVEALKRA-GNVVTLL 99 (208)
Q Consensus 25 ~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~-gD~Il~Vng~~l~~~t~~~av~~l~~~-~~~v~l~ 99 (208)
..||+++..-... .....+++|..|.++|||+++| |+. ||+|++|||. +.. +++..++|+.. +..+.|.
T Consensus 95 ~~lGi~~~~~~~~--~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~l~ 165 (209)
T 3rle_A 95 GLLGVSIRFCSFD--GANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLKLY 165 (209)
T ss_dssp SSSCEEEEEEECT--TGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEEEE
T ss_pred CccceEEeecChh--HccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEEEE
Confidence 3588888742221 0113589999999999999999 999 9999999997 543 45666777764 5667664
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.90 E-value=1.8e-05 Score=69.63 Aligned_cols=56 Identities=18% Similarity=0.364 Sum_probs=45.4
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHH--hCCCEEEEeee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALK--RAGNVVTLLGE 101 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~--~~~~~v~l~~~ 101 (208)
..+++|..|.++|+|+++| |+.||+|++|||+.+.++ .+...++. ..+..+.|...
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~ 319 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLL 319 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEE
Confidence 4689999999999999999 999999999999999976 44444444 35677877543
No 189
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.89 E-value=3.5e-05 Score=64.91 Aligned_cols=55 Identities=25% Similarity=0.480 Sum_probs=46.4
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
..+++|..|.++|||+++| |+.||+|++|||+.+.. ..+...+|+. .+..+.|..
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v 299 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVV 299 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE
Confidence 4689999999999999999 99999999999999986 4677777774 466777753
No 190
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.88 E-value=1.8e-05 Score=72.33 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.2
Q ss_pred CcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEeee
Q psy10226 25 AGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLGE 101 (208)
Q Consensus 25 ~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~~ 101 (208)
.+||+.+... ..+++|..|.+||||+++| |++||+|++|||..+.. .+...+|+. .+..|.|.+.
T Consensus 485 ~~lG~~~~~~--------~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~ 551 (597)
T 4fgm_A 485 VNFGAKYKAS--------PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAF 551 (597)
T ss_dssp CCCSEEEEEE--------TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEE
T ss_pred cccceEEecc--------CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEE
Confidence 4688887652 3379999999999999999 99999999999999953 344455553 5677777543
No 191
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.88 E-value=5.1e-05 Score=55.47 Aligned_cols=53 Identities=25% Similarity=0.399 Sum_probs=43.7
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEe
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLL 99 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~ 99 (208)
..+++|..|.++++|+++ |+.||+|++|||..+.. ..+....++. .+..+.|.
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~ 78 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINIT 78 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEE
Confidence 458999999999999998 99999999999999985 4666666663 46677774
No 192
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.81 E-value=1.7e-05 Score=70.12 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=47.1
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEee
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLLG 100 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~~ 100 (208)
..+++|..|.++|+|+++| |++||+|++|||..+.+ .++..++|+..+..+.|.+
T Consensus 385 ~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v 439 (451)
T 3pv2_A 385 VIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQV 439 (451)
T ss_dssp EEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEE
T ss_pred CCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEE
Confidence 3588999999999999999 99999999999999985 5788888887666676643
No 193
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.78 E-value=4.3e-05 Score=64.59 Aligned_cols=53 Identities=25% Similarity=0.372 Sum_probs=44.3
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEe
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLL 99 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~ 99 (208)
..+++|..|.++|+|+++| |+.||.|++|||..+.. ..+..++|+. +..+.|.
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~ 307 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQ 307 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEE
Confidence 4689999999999999999 99999999999999985 4666777765 4556664
No 194
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.77 E-value=2.2e-05 Score=69.42 Aligned_cols=56 Identities=20% Similarity=0.431 Sum_probs=46.6
Q ss_pred CcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEeeee
Q psy10226 44 TSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLGEK 102 (208)
Q Consensus 44 ~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~~~ 102 (208)
.+++|..|.++|||+++| |+.||+|++|||..+.++ .+...++.. .+..+.|.+.|
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R 339 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVER 339 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEE
Confidence 689999999999999999 999999999999999865 556666663 56788775444
No 195
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.64 E-value=5e-05 Score=64.78 Aligned_cols=54 Identities=30% Similarity=0.412 Sum_probs=45.7
Q ss_pred CcEEEEEECCCCcccccCCCCC-----------CCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 44 TSIYITKLIPGGAAASDGRLQV-----------NDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 44 ~~i~I~~v~~gg~A~~~G~L~~-----------gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
.+++|..|.++|||+++| |+. ||+|++|||..+.++ .+...+|.+ .+..+.|.+
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v 317 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEV 317 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEE
Confidence 689999999999999999 999 999999999999865 667777754 467777754
No 196
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.56 E-value=1.1e-05 Score=71.40 Aligned_cols=53 Identities=26% Similarity=0.354 Sum_probs=0.0
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEE
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTL 98 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l 98 (208)
..+++|..|.++++|+++| |+.||+|++|||..+.. +++..++|+.....+.|
T Consensus 382 ~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l 434 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLAL 434 (448)
T ss_dssp --------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEE
Confidence 4578999999999999999 99999999999999984 56777777765555555
No 197
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.38 E-value=2.5e-05 Score=66.23 Aligned_cols=53 Identities=30% Similarity=0.518 Sum_probs=0.0
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEEEEe
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVVTLL 99 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v~l~ 99 (208)
..+++|..|.++|||+++| |+.||+|++|||..+.. +.+...+|+. +..+.|.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~ 305 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR-ESTLNMV 305 (332)
T ss_dssp ---------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEE
Confidence 3578999999999999999 99999999999999964 4555666654 5556653
No 198
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.21 E-value=0.00071 Score=64.94 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=53.9
Q ss_pred CCcccEEEeccCCCCCCCCCCcEEEEEECCC--------CcccccC-CCCCCCEEEEECCeecCCCCHHHHHHHHHh-CC
Q psy10226 24 GAGLGFSIAGGTDNPHIGDDTSIYITKLIPG--------GAAASDG-RLQVNDVIHQVNHVTVVDVPHSAAVEALKR-AG 93 (208)
Q Consensus 24 ~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~g--------g~A~~~G-~L~~gD~Il~Vng~~l~~~t~~~av~~l~~-~~ 93 (208)
..++|+.+.-. +.+++|..|.+| |||+++| .|+ ||+|++|||..+.++. +++.+|+. .+
T Consensus 736 ~~g~G~~~~~~--------~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g 804 (1045)
T 1k32_A 736 SGRIACDFKLD--------GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAG 804 (1045)
T ss_dssp CCBCSEEEEEE--------TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTT
T ss_pred cceecEEEEEe--------CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCC
Confidence 45789888651 347899999998 9999999 489 9999999999999876 67778875 46
Q ss_pred CEEEEeeee
Q psy10226 94 NVVTLLGEK 102 (208)
Q Consensus 94 ~~v~l~~~~ 102 (208)
..|.|.+.+
T Consensus 805 ~~v~l~v~r 813 (1045)
T 1k32_A 805 TSARIRLSG 813 (1045)
T ss_dssp SEEEEEEEC
T ss_pred CEEEEEEEC
Confidence 677775443
No 199
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.12 E-value=9.4e-05 Score=65.30 Aligned_cols=54 Identities=22% Similarity=0.396 Sum_probs=44.4
Q ss_pred CcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCEEEEee
Q psy10226 44 TSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKR--AGNVVTLLG 100 (208)
Q Consensus 44 ~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~--~~~~v~l~~ 100 (208)
.+++|..|.++++|+++| |+.||+|++|||..+..+ .+...+|.. .+..+.|..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v 341 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGL 341 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEE
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE
Confidence 589999999999999999 999999999999999976 455666653 466666643
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.39 E-value=0.0058 Score=55.07 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=32.4
Q ss_pred CCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCC
Q psy10226 43 DTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDV 80 (208)
Q Consensus 43 ~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~ 80 (208)
..|++|..|.++|||++ + |+.||.|++|||+.+...
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~ 311 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCE 311 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSS
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcC
Confidence 46999999999999986 4 999999999999999753
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.93 E-value=0.014 Score=52.48 Aligned_cols=54 Identities=4% Similarity=0.146 Sum_probs=46.3
Q ss_pred CCCcEEEEEECCCCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC-EEEE
Q psy10226 42 DDTSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN-VVTL 98 (208)
Q Consensus 42 ~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~-~v~l 98 (208)
+..+++|..|.++++|...| ++.||+|++|||..+.++ .+..++|+++.+ .++|
T Consensus 413 ~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~ 467 (539)
T 4fln_A 413 GEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVF 467 (539)
T ss_dssp TCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEE
T ss_pred CceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEE
Confidence 35689999999999999999 999999999999999975 677888898766 3444
No 202
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=93.47 E-value=0.14 Score=34.09 Aligned_cols=41 Identities=12% Similarity=0.132 Sum_probs=36.9
Q ss_pred HHhCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 89 LKRAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 89 l~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
|+ .++.+.-+|++++.+.+|++++++|+..+..++|.+...
T Consensus 41 l~-~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 41 LL-TEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPA 81 (82)
T ss_dssp CC-SSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CC-CCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEeC
Confidence 44 789999999999999999999999999999999998753
No 203
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=91.65 E-value=0.39 Score=32.97 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=38.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~~~~ 134 (208)
..|+.+.-+|++++.+.+|.+++++|++. +..++|.+..+..++
T Consensus 48 ~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~~~~ 93 (95)
T 3gge_A 48 CVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKSS 93 (95)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEECSCE
T ss_pred CCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECccccc
Confidence 56899999999999999999999999995 558899888876543
No 204
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=89.08 E-value=0.97 Score=31.93 Aligned_cols=42 Identities=31% Similarity=0.441 Sum_probs=37.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+.++.|.+++++|+.+ +..+.|.|.|...
T Consensus 51 ~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 51 QKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 45889999999999999999999999986 6689999998754
No 205
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=88.43 E-value=1.1 Score=29.63 Aligned_cols=44 Identities=11% Similarity=0.213 Sum_probs=37.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+.+.+++++.++++...+.+.|.+.+.....
T Consensus 41 ~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~~~ 84 (88)
T 3e17_A 41 HEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLEHH 84 (88)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC----
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCccc
Confidence 56889999999999999999999999999999999998775544
No 206
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=85.27 E-value=3.1 Score=28.92 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=38.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+.+.+++++..+++..+..+.|.+.+....
T Consensus 62 ~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 62 HPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQS 104 (117)
T ss_dssp CTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTTB
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCCC
Confidence 5688999999999999999999999998899999999886443
No 207
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=83.96 E-value=2.7 Score=29.11 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=38.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+.....
T Consensus 64 ~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 107 (117)
T 2csj_A 64 QENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRPRKVQ 107 (117)
T ss_dssp CTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEECCccc
Confidence 57999999999999999999999999999999999998865443
No 208
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=83.93 E-value=2.7 Score=28.82 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=36.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc---CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT---HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~---~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+..++++++..+++.. ...+.|.+.+...
T Consensus 53 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 53 EPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 56889999999999999999999999887 4579999988644
No 209
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=83.02 E-value=2.2 Score=32.18 Aligned_cols=39 Identities=26% Similarity=0.444 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+.+..+.+++.+|+..+..+.|.|.|
T Consensus 131 ~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R 169 (170)
T 3egg_C 131 QVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGR 169 (170)
T ss_dssp CTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEe
Confidence 568899999999999999999999999999999999876
No 210
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=82.99 E-value=2.3 Score=28.83 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=37.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+.+..+.++..+++.....+.|.+.+.....
T Consensus 55 ~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~~~ 98 (103)
T 2dc2_A 55 HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVALEH 98 (103)
T ss_dssp CSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC---
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCcc
Confidence 56889989999999999999999999999999999998876544
No 211
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=82.85 E-value=2.4 Score=27.96 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=36.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|+..+.+.+++++..+++.....+.|.+.+..
T Consensus 48 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 48 HVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp CTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 56889999999999999999999999999889999998654
No 212
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=82.82 E-value=2.2 Score=28.08 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=36.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|+..+.+++++++.++++.....+.|.+.++.
T Consensus 45 ~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 45 HVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY 85 (88)
T ss_dssp CTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCc
Confidence 57899999999999999999999999998778888887753
No 213
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=82.58 E-value=1.9 Score=30.31 Aligned_cols=42 Identities=26% Similarity=0.339 Sum_probs=37.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+.++++.++..+++..+..+.|.+.+...
T Consensus 73 ~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~~~ 114 (118)
T 3b76_A 73 KTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVKE 114 (118)
T ss_dssp CTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 578999999999999999999999999999999999987643
No 214
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=82.45 E-value=2.9 Score=29.33 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=37.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+.+..+.+++.+++..++.+.|.+.+...
T Consensus 73 ~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 73 RVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGD 114 (120)
T ss_dssp CTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCTT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 468999999999999999999999999999999999987643
No 215
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=82.42 E-value=4.3 Score=28.54 Aligned_cols=42 Identities=19% Similarity=0.428 Sum_probs=37.1
Q ss_pred hCCCEEEEeeeeeCC-CCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLE-NVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~-~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.|.-+|++.+. ++.+.++..+++..+..+.|.+.+...
T Consensus 74 ~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 74 KENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREPV 116 (128)
T ss_dssp CSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 568888889999997 999999999999999999999987643
No 216
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=82.17 E-value=6.5 Score=27.43 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=36.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~~~ 132 (208)
+.|+.|.-+|++.+....+.++..+++. .+..+.|.+.+...
T Consensus 64 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 64 ETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 4588999999999999999999999998 46889999988653
No 217
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=81.78 E-value=6.1 Score=26.40 Aligned_cols=43 Identities=19% Similarity=0.368 Sum_probs=37.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+....
T Consensus 49 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 49 KNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEAE 91 (102)
T ss_dssp CTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTTCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCc
Confidence 5689999999999999999999999988889999999876443
No 218
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=81.17 E-value=3.1 Score=29.46 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=36.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc-------CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT-------HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~-------~~~~~l~v~~~~~ 132 (208)
+.++.|.-+|+..+.++.|.+++.+|+.+ +..+.|.+.|...
T Consensus 75 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 75 RMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp CSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 46888888999999999999999999976 7899999988643
No 219
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=81.16 E-value=3.8 Score=27.28 Aligned_cols=43 Identities=21% Similarity=0.424 Sum_probs=37.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.|..+.
T Consensus 51 ~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~p~ 93 (96)
T 2qkv_A 51 QRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRPKPA 93 (96)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCC-
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeCCcc
Confidence 5789999999999999999999999999988999999886543
No 220
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=80.94 E-value=4.8 Score=27.50 Aligned_cols=44 Identities=18% Similarity=0.380 Sum_probs=38.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+.+..+.++..+++..++.+.|.+.+.....
T Consensus 45 ~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 88 (106)
T 2la8_A 45 QRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKPGS 88 (106)
T ss_dssp CTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEECCSCS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCCCC
Confidence 56899999999999999999999999998888999999875443
No 221
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=80.58 E-value=4.1 Score=26.58 Aligned_cols=42 Identities=29% Similarity=0.407 Sum_probs=37.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|+..+....+.+...+++..+..+.|.+.++..
T Consensus 47 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 47 RAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPST 88 (90)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccCC
Confidence 578999999999999999999999999988899999987653
No 222
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=80.55 E-value=3.6 Score=27.92 Aligned_cols=42 Identities=17% Similarity=0.309 Sum_probs=37.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.+..+
T Consensus 61 ~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 61 QIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp CSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCC
Confidence 568899899999999999999999999999999999987644
No 223
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=80.28 E-value=3.1 Score=28.96 Aligned_cols=41 Identities=46% Similarity=0.590 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.+..
T Consensus 74 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 74 QVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 56889999999999999999999999998999999998753
No 224
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=80.19 E-value=4.2 Score=27.30 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+.+++++.++++. .+..+.|.+.|..
T Consensus 57 ~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 57 SIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp CTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4688999999999999999999999988 6788999988753
No 225
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=79.75 E-value=3.6 Score=28.04 Aligned_cols=41 Identities=32% Similarity=0.258 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc-CCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT-HERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~-~~~~~l~v~~~~ 131 (208)
+.++.+.-+|++.+...+++++..+++.. ...+.|.+.++.
T Consensus 64 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 64 LPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSGP 105 (108)
T ss_dssp CTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 56889999999999999999999999996 568899988764
No 226
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=78.60 E-value=3.7 Score=28.46 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=37.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+...++.++..+++..+..+.|.+.+...
T Consensus 69 ~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 69 MEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESSCC
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEECCc
Confidence 568999999999999999999999999998999999987644
No 227
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=78.51 E-value=4.5 Score=27.42 Aligned_cols=43 Identities=23% Similarity=0.376 Sum_probs=37.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.+....
T Consensus 60 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 60 QVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPS 102 (107)
T ss_dssp CTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Confidence 4688999999999999999999999999999999999886543
No 228
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=78.35 E-value=4.6 Score=27.48 Aligned_cols=42 Identities=38% Similarity=0.461 Sum_probs=37.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|+..+.+..+.++..+++..+..+.|.+.+...
T Consensus 52 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 52 QIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKPGS 93 (106)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECCSS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 568899889999999999999999999999999999998643
No 229
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=78.07 E-value=6.2 Score=26.28 Aligned_cols=41 Identities=24% Similarity=0.450 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+..+.+.++.++++.. +..+.|.+.|..
T Consensus 49 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 49 CEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp CSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 46899999999999999999999999985 688999998764
No 230
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=77.98 E-value=5.8 Score=26.73 Aligned_cols=42 Identities=24% Similarity=0.368 Sum_probs=37.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|+..+....+.++..+++..+..+.|.+.+...
T Consensus 62 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 62 RKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECSSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCC
Confidence 578999999999999999999999999989999999987644
No 231
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=77.96 E-value=5.9 Score=25.83 Aligned_cols=41 Identities=24% Similarity=0.444 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 49 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 49 MQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIS 89 (92)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEccc
Confidence 56889999999999999999999999988899999998764
No 232
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=77.93 E-value=4.6 Score=27.25 Aligned_cols=44 Identities=36% Similarity=0.444 Sum_probs=37.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+.+..+.++...++..+..+.|.+.+.....
T Consensus 53 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 53 QIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPTSMY 96 (105)
T ss_dssp CTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCCC--
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCCCC
Confidence 56889999999999999999999999988899999999876544
No 233
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=77.84 E-value=6 Score=26.51 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+..
T Consensus 61 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 61 QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 101 (103)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEecC
Confidence 56889999999999999999999999988999999998753
No 234
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=77.79 E-value=4.6 Score=25.85 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=35.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+.
T Consensus 42 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 42 RAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 5688999999999999999999999988878888888764
No 235
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.53 E-value=4.3 Score=27.00 Aligned_cols=41 Identities=15% Similarity=0.335 Sum_probs=37.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.|..
T Consensus 49 ~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 49 FPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp CTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 46889999999999999999999999988999999999875
No 236
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=77.48 E-value=4.4 Score=28.18 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=37.0
Q ss_pred HhCCCEEEEeeeeeCCCCCHHHHHHHHHhc----CCeEEEEEccCCc
Q psy10226 90 KRAGNVVTLLGEKNLENVTHEEAVATLKAT----HERVNLLIGKFEP 132 (208)
Q Consensus 90 ~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~----~~~~~l~v~~~~~ 132 (208)
-+.|+.+.-+|+..+.++.++++.++++.. +..+.|.+.+..+
T Consensus 62 L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 62 VVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPP 108 (118)
T ss_dssp SCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCCS
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCCc
Confidence 367899999999999999999999999875 7889999988643
No 237
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=77.38 E-value=4.8 Score=28.60 Aligned_cols=42 Identities=24% Similarity=0.381 Sum_probs=36.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcC--CeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATH--ERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~--~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+.+.+++++..+++... ..+.|.+.+...
T Consensus 85 ~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 85 RPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 568899999999999999999999999875 889999987643
No 238
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=77.21 E-value=5.7 Score=25.98 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+..+..
T Consensus 43 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 43 QQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQV 86 (91)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC---
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCCC
Confidence 57899999999999999999999999988888999998865443
No 239
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.39 E-value=9.4 Score=25.60 Aligned_cols=44 Identities=27% Similarity=0.351 Sum_probs=38.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+....+.++...++..+..+.+.+.+.....
T Consensus 51 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~ 94 (106)
T 2eei_A 51 LADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDKETDK 94 (106)
T ss_dssp CSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCTTTSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCchhh
Confidence 57888888999999999999999999888889999998876544
No 240
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=76.13 E-value=5.8 Score=28.24 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.|.-+|++.+.++.+.+++.+++..+..+.|.+.+..
T Consensus 84 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 84 RMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp CTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 46889999999999999999999999999999999988653
No 241
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=76.03 E-value=7 Score=26.31 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=37.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.++.+.-+|++.+....+.++...++..+..+.|.+.+....
T Consensus 58 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 58 AAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCSS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 5688999999999999999999999999999999999886543
No 242
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=76.00 E-value=5 Score=27.05 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=37.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 58 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 58 QVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp CTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 568999999999999999999999999888899999988643
No 243
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=75.84 E-value=12 Score=25.57 Aligned_cols=44 Identities=30% Similarity=0.454 Sum_probs=37.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.|.-+|++.+....+.++..+++.....+.|.+.+.....
T Consensus 63 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 63 WAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEAHY 106 (116)
T ss_dssp CTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCSSCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCccc
Confidence 56899999999999999999999999988889999998764433
No 244
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=75.47 E-value=7.4 Score=25.57 Aligned_cols=40 Identities=38% Similarity=0.468 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.+.
T Consensus 53 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 92 (96)
T 1d5g_A 53 HKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG 92 (96)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 4688998899999999999999999998888899988765
No 245
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=75.34 E-value=7.5 Score=25.66 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 50 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 50 HIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD 91 (97)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 568899999999999999999999999888899999987543
No 246
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=75.15 E-value=6.9 Score=26.04 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 57 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 97 (101)
T 2jik_A 57 QEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRL 97 (101)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEES
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 56889999999999999999999999988888999987653
No 247
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=74.94 E-value=6.3 Score=27.35 Aligned_cols=41 Identities=39% Similarity=0.548 Sum_probs=36.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.+..
T Consensus 73 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 113 (117)
T 2fne_A 73 KRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD 113 (117)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 46889999999999999999999999988888999998764
No 248
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=74.82 E-value=6.3 Score=27.11 Aligned_cols=42 Identities=21% Similarity=0.432 Sum_probs=36.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 70 ~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 70 KTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp CTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCBSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 457888889999999999999999999989999999987644
No 249
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=74.82 E-value=6.4 Score=27.00 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=36.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+..++++..+++...+.+.|.+.+..
T Consensus 68 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 108 (113)
T 1va8_A 68 HEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSS 108 (113)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 67999999999999999999999999988888999888654
No 250
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=74.67 E-value=8.1 Score=25.57 Aligned_cols=42 Identities=21% Similarity=0.385 Sum_probs=37.7
Q ss_pred HhCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 90 KRAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 90 ~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
-+.|+.+.-+|++.+.+..+.+...+++..+..+.|.+.+..
T Consensus 52 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 93 (99)
T 3khf_A 52 LRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALE 93 (99)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECSC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEECC
Confidence 367899999999999999999999999999999999998754
No 251
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=74.57 E-value=6.4 Score=25.67 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=35.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+.+.++.+..++++..+..+.|.+.+...
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 46 EDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKA 87 (91)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC---
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 568999999999999999999999999888899999987643
No 252
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=74.48 E-value=6.5 Score=25.84 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+.
T Consensus 53 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 53 QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE 92 (95)
T ss_dssp CTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEE
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeC
Confidence 5688999999999999999999999998899999998875
No 253
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=74.35 E-value=5.6 Score=25.89 Aligned_cols=39 Identities=31% Similarity=0.414 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+
T Consensus 50 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r 88 (90)
T 1qav_A 50 FVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY 88 (90)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 568889899999999999999999999988888888865
No 254
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=74.32 E-value=6.8 Score=26.62 Aligned_cols=42 Identities=19% Similarity=0.410 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 58 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 58 QTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPA 99 (111)
T ss_dssp CSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESCT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 568899999999999999999999999888899999987543
No 255
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=74.13 E-value=8.2 Score=25.37 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=37.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+....
T Consensus 49 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 49 QAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEAD 91 (96)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCCTT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCCCc
Confidence 5688888899999999999999999988888999999887543
No 256
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=74.06 E-value=20 Score=25.09 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=36.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+..+.++.++++.. +..+.|.+.+..
T Consensus 63 ~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 63 ETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 46889999999999999999999999987 677999998764
No 257
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=73.94 E-value=6.6 Score=27.41 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=36.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+.+..+.++..+++..++.+.+.+.+.
T Consensus 65 ~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 104 (125)
T 3hpk_A 65 AAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 104 (125)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 5688999999999999999999999999999999999874
No 258
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=73.83 E-value=3.6 Score=29.22 Aligned_cols=41 Identities=24% Similarity=0.374 Sum_probs=34.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCC-eEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHE-RVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~-~~~l~v~~~~ 131 (208)
+.|+.|.-+|++.+.+++|++++++++.... .+.|.+.+..
T Consensus 77 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 77 QPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 4588888899999999999999999999855 5888887753
No 259
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=73.39 E-value=9.1 Score=24.63 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.|.
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (88)
T 2uzc_A 46 RIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRE 85 (88)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 5688999999999999999999999988888899988765
No 260
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.22 E-value=8.2 Score=25.11 Aligned_cols=40 Identities=28% Similarity=0.376 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.++.+.-+|++.+....+.++..+++.....+.|.+.+.
T Consensus 50 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 89 (93)
T 2dkr_A 50 KRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSG 89 (93)
T ss_dssp CTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 5688998999999999999999999998888888988764
No 261
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=73.19 E-value=6.4 Score=25.33 Aligned_cols=38 Identities=21% Similarity=0.388 Sum_probs=33.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIG 128 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~ 128 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.
T Consensus 48 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 85 (87)
T 4e34_A 48 HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 85 (87)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 56888888999999999999999999998888888774
No 262
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=73.08 E-value=5.1 Score=26.94 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++.++++.. +..+.|.+.+...
T Consensus 54 ~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 54 HPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 45889999999999999999999999887 7899999987643
No 263
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=72.96 E-value=9 Score=25.24 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=35.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+...++++...+++.....+.|.+.+.
T Consensus 56 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 56 TPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG 95 (96)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 5689999999999999999999999999888888888654
No 264
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=72.86 E-value=6.9 Score=25.62 Aligned_cols=43 Identities=19% Similarity=0.348 Sum_probs=37.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|+..+....+.+...+++.....+.+.+.+....
T Consensus 48 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 48 KNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKELE 90 (95)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC--
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCccc
Confidence 6788999999999999999999999999999999888876543
No 265
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=72.83 E-value=6.2 Score=27.23 Aligned_cols=41 Identities=24% Similarity=0.417 Sum_probs=35.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcC----CeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATH----ERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~----~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++... ..+.|.+.+..
T Consensus 62 ~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 62 NEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp CTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 468899999999999999999999998874 48899988763
No 266
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=72.45 E-value=9.1 Score=25.08 Aligned_cols=42 Identities=29% Similarity=0.311 Sum_probs=37.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+...
T Consensus 49 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 49 SSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPGK 90 (95)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEESC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCc
Confidence 568899999999999999999999999889999999987643
No 267
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.43 E-value=7 Score=27.06 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=36.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.|.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 67 ~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 67 QEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp CTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 468899889999999999999999999888899999987643
No 268
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=72.27 E-value=7.3 Score=27.40 Aligned_cols=41 Identities=5% Similarity=0.070 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.+..
T Consensus 85 ~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 85 AVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp CTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 57899999999999999999999999988888999987653
No 269
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=72.14 E-value=8.5 Score=25.82 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=37.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+...
T Consensus 45 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 45 LDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGDS 86 (106)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECHHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCe
Confidence 679999999999999999999999999889999999987643
No 270
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=72.07 E-value=7.4 Score=25.88 Aligned_cols=42 Identities=24% Similarity=0.408 Sum_probs=36.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 56 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 56 RVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTG 97 (103)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTTC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 568999999999999999999999999888999999987643
No 271
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.05 E-value=7.8 Score=25.92 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 58 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 98 (104)
T 2djt_A 58 EVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPL 98 (104)
T ss_dssp CTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 56889989999999999999999999888889999998754
No 272
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=71.99 E-value=8.9 Score=24.98 Aligned_cols=40 Identities=40% Similarity=0.542 Sum_probs=35.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++.....+.|.+.+.
T Consensus 53 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 53 QIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP 92 (94)
T ss_dssp CTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 5688998999999999999999999998888888988764
No 273
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=71.87 E-value=8.7 Score=25.56 Aligned_cols=42 Identities=26% Similarity=0.410 Sum_probs=37.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+...
T Consensus 54 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 54 GVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQP 95 (102)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 568899899999999999999999999988999999987643
No 274
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=71.69 E-value=11 Score=25.88 Aligned_cols=42 Identities=19% Similarity=0.424 Sum_probs=37.4
Q ss_pred hCCCEEEEeeeeeCC-CCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLE-NVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~-~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+. +..+.++..+++..+..+.|.+.+...
T Consensus 69 ~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 69 KETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSL 111 (117)
T ss_dssp CTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSCC
T ss_pred CCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 568899999999998 999999999999999999999988644
No 275
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=71.42 E-value=7.8 Score=25.54 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+.+.++.+...+++..+..+.|.+.+
T Consensus 50 ~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 50 RVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp CSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 578999999999999999999999999888888888864
No 276
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=71.27 E-value=11 Score=26.09 Aligned_cols=42 Identities=26% Similarity=0.237 Sum_probs=36.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+...++++..++++.. +..+.|.+.+...
T Consensus 65 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 65 QIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp CTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCc
Confidence 56888888999999999999999999887 6789999988644
No 277
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=71.25 E-value=11 Score=25.12 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=36.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.++.+.-+|++.+....+.+...+++.....+.|.+.|..
T Consensus 55 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 95 (100)
T 1whd_A 55 QQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVS 95 (100)
T ss_dssp CSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 67899999999999999999999999988888889887753
No 278
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=71.09 E-value=11 Score=24.75 Aligned_cols=42 Identities=31% Similarity=0.442 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++...++.....+.|.+.+...
T Consensus 50 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 91 (98)
T 2opg_A 50 WAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEA 91 (98)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECSS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCCC
Confidence 568899999999999999999999999888889999987543
No 279
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=70.92 E-value=7.5 Score=27.09 Aligned_cols=42 Identities=24% Similarity=0.337 Sum_probs=37.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 71 ~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 71 RIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNED 112 (124)
T ss_dssp CTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECTT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 568899899999999999999999999998899999988654
No 280
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=70.87 E-value=9.3 Score=26.10 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+.
T Consensus 69 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 69 RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRG 108 (112)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 5688998899999999999999999998888999998765
No 281
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=70.87 E-value=10 Score=24.23 Aligned_cols=39 Identities=18% Similarity=0.345 Sum_probs=32.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+.+..+.++.++++.. +..+.+.+.|
T Consensus 45 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 45 ETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 46889999999999999999999999886 6778887753
No 282
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=70.80 E-value=10 Score=25.00 Aligned_cols=40 Identities=23% Similarity=0.423 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.|.
T Consensus 57 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 57 KVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTF 96 (98)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeC
Confidence 5688999999999999999999999998889999998874
No 283
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=70.59 E-value=11 Score=24.80 Aligned_cols=42 Identities=26% Similarity=0.286 Sum_probs=37.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+...++.++..+++..+..+.|.+.+...
T Consensus 52 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 52 KPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVS 93 (97)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 568899899999999999999999999988899999987543
No 284
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=70.45 E-value=8.6 Score=26.29 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=37.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+...
T Consensus 63 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 63 KVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp CTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCCSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 468889889999999999999999999988999999988644
No 285
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=70.35 E-value=6.8 Score=26.38 Aligned_cols=39 Identities=28% Similarity=0.503 Sum_probs=34.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCC----eEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHE----RVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~----~~~l~v~~ 129 (208)
+.|+.+.-+|++.+....+.++..+++...+ .+.|.+.+
T Consensus 64 ~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 64 NEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 5688999999999999999999999998875 88888765
No 286
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=70.31 E-value=9.4 Score=25.81 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 64 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 64 RMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECC
Confidence 56889999999999999999999999988888888887653
No 287
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=70.17 E-value=7.7 Score=26.48 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=34.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcC----CeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATH----ERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~----~~~~l~v~~~~ 131 (208)
+.++.+.-+|+..+.+++|++++++|+.+. ..+.+.+.+..
T Consensus 61 ~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 61 KPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp CTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 568888889999999999999999998875 56777777653
No 288
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=69.69 E-value=8.8 Score=24.81 Aligned_cols=40 Identities=28% Similarity=0.366 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.|.
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (89)
T 2q3g_A 46 AVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRA 85 (89)
T ss_dssp CTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeC
Confidence 5689999999999999999999999998888889988765
No 289
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=69.45 E-value=27 Score=28.09 Aligned_cols=43 Identities=28% Similarity=0.394 Sum_probs=38.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.|.-+|++.+.+..|.+++.+++..+..+.|.|.+....
T Consensus 123 ~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 123 FVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEV 165 (263)
T ss_dssp CSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSSS
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCccc
Confidence 5789999999999999999999999999999999999986443
No 290
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=69.37 E-value=8.2 Score=24.64 Aligned_cols=40 Identities=25% Similarity=0.358 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+.
T Consensus 44 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 83 (85)
T 1rgw_A 44 SQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 83 (85)
T ss_dssp CCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESC
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeC
Confidence 5688999999999999999999999988878888888764
No 291
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=69.12 E-value=11 Score=25.53 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=37.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++...++..+..+.|.+.+...
T Consensus 56 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 97 (110)
T 1um1_A 56 SLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSDV 97 (110)
T ss_dssp CTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCCH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 568899999999999999999999999999999999988654
No 292
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=68.98 E-value=12 Score=24.28 Aligned_cols=40 Identities=8% Similarity=0.135 Sum_probs=35.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.|.
T Consensus 51 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 51 KPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 6789999999999999999999888988888888888653
No 293
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=68.43 E-value=5.3 Score=27.07 Aligned_cols=41 Identities=20% Similarity=0.435 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh-----cCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA-----THERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~-----~~~~~~l~v~~~~ 131 (208)
+.++.+.-+|+..+..++|++++++|+. ..+.+.+.+.+-.
T Consensus 52 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 52 KVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp CTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 5688888899999999999999999988 4677888887654
No 294
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=67.97 E-value=12 Score=23.92 Aligned_cols=41 Identities=17% Similarity=0.441 Sum_probs=36.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+...++++...+++.....+.|.+.|..
T Consensus 45 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 45 RPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp CTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 57899999999999999999999999988888899888753
No 295
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=67.45 E-value=8.7 Score=26.14 Aligned_cols=43 Identities=26% Similarity=0.438 Sum_probs=37.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|+..+....+.++..+++..+..+.|.+.+....
T Consensus 55 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 55 QVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp CTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Confidence 5688999999999999999999999999999999999886543
No 296
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=67.41 E-value=12 Score=24.78 Aligned_cols=42 Identities=17% Similarity=0.391 Sum_probs=36.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|+..+...++.+...+++...+.+.|.+.+...
T Consensus 59 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 59 KPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 568899999999999999999999999888889998887543
No 297
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=67.05 E-value=8.5 Score=25.96 Aligned_cols=42 Identities=36% Similarity=0.463 Sum_probs=37.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+.+..+.++..+++..+..+.|.+.+...
T Consensus 62 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 62 HKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp CSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 568899999999999999999999999999999999987643
No 298
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=66.49 E-value=12 Score=25.48 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+..
T Consensus 57 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 97 (114)
T 2edz_A 57 LDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDGD 97 (114)
T ss_dssp CTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 56899999999999999999999999888899999998754
No 299
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=66.42 E-value=11 Score=25.25 Aligned_cols=41 Identities=15% Similarity=0.277 Sum_probs=36.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 64 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 64 EPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRRL 104 (108)
T ss_dssp CSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 56888989999999999999999999888889999997754
No 300
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=65.77 E-value=8.2 Score=25.99 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+.+++.+++.++++..+..+.|.+.+.
T Consensus 56 ~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 56 HVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp CTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 5689999999999999999999999998888888888743
No 301
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=65.56 E-value=13 Score=25.51 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=35.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCe-EEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHER-VNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~-~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+....+.+..++++..++. +.|.+.+..+.
T Consensus 63 ~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~~~ 106 (109)
T 2vsv_A 63 REGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLLDE 106 (109)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC--
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECCCc
Confidence 57899999999999999999999999887765 89998877543
No 302
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=65.55 E-value=15 Score=22.83 Aligned_cols=39 Identities=15% Similarity=0.371 Sum_probs=33.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+..+.+.+...+++.....+.+.+.+
T Consensus 41 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 41 QEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 568899899999999999999999998877788888765
No 303
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=65.45 E-value=20 Score=23.89 Aligned_cols=44 Identities=27% Similarity=0.362 Sum_probs=37.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.++.+.-+|++.+..+.+.+...+++..+..+.|.+.+.....
T Consensus 48 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~~~ 91 (103)
T 1v5l_A 48 CPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRL 91 (103)
T ss_dssp CTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTTTT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCeEc
Confidence 56889999999999999999999999988889999998765433
No 304
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=65.30 E-value=14 Score=25.71 Aligned_cols=42 Identities=17% Similarity=0.391 Sum_probs=36.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+...++.++..+++..+..+.|.+.+...
T Consensus 79 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 79 KPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 568899999999999999999999999988899999887543
No 305
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=65.29 E-value=16 Score=24.54 Aligned_cols=42 Identities=29% Similarity=0.408 Sum_probs=36.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++.. +..+.|.+.+...
T Consensus 59 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 59 KAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE 102 (111)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 56889999999999999999999999985 7889999987643
No 306
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=65.27 E-value=14 Score=23.97 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=35.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+++..+....+.++..+++..+..+.|.+.+.
T Consensus 53 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 92 (97)
T 2iwn_A 53 QIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRR 92 (97)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 5688998899999999999999999888888899988764
No 307
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.90 E-value=16 Score=23.83 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=35.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.++.+.-+|++.+..+.+.++..+++..+..+.|.+.+.
T Consensus 51 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (94)
T 2eeg_A 51 CPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSG 90 (94)
T ss_dssp CTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 5789999999999999999999999988888889988765
No 308
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.75 E-value=7.1 Score=27.35 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=36.8
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.++.|.-+|++.+.++.+.++..+++..+..+.|.+.+..
T Consensus 80 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 80 CTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 57888888999999999999999999998999999998764
No 309
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=64.43 E-value=28 Score=23.03 Aligned_cols=42 Identities=26% Similarity=0.366 Sum_probs=36.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.|...
T Consensus 48 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 89 (103)
T 1wf7_A 48 RIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASA 89 (103)
T ss_dssp CTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCSC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 568899899999999999999999998888899999987643
No 310
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.38 E-value=10 Score=24.77 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=34.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.++.+.-+|++.+ +.++++..++++..++.+.|.+.+.
T Consensus 49 ~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 49 HVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSG 87 (91)
T ss_dssp CTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECC
T ss_pred CCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 56899999999999 8999999999998888888888764
No 311
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=64.25 E-value=19 Score=23.18 Aligned_cols=41 Identities=29% Similarity=0.421 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|+..+....+.++..+++...+.+.+.+.+..
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 46 LAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE 86 (91)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCC
Confidence 56899999999999999999999999988777777766543
No 312
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=63.89 E-value=15 Score=24.00 Aligned_cols=41 Identities=20% Similarity=0.445 Sum_probs=36.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.+...+++.....+.|.+.|..
T Consensus 49 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 89 (94)
T 1vb7_A 49 RPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSS 89 (94)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 57899999999999999999999999988788999998763
No 313
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=63.75 E-value=13 Score=27.85 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=36.1
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~ 129 (208)
+.|+.|.-+|++.+....|.+++..++..+..+.|.+.|
T Consensus 42 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 42 QPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 578889889999999999999999999998999999988
No 314
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=63.46 E-value=9 Score=24.76 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=34.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCC--eEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHE--RVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~--~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+.+.++.++..+++.... .+.|.+.+.
T Consensus 47 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 47 RSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 5689999999999999999999999988743 888888764
No 315
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=63.31 E-value=10 Score=26.46 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=37.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+..+++.++..+++..+..+.|.+.+...
T Consensus 66 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 66 QVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKT 107 (129)
T ss_dssp CSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEESS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 678999999999999999999999999988899999987643
No 316
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=62.90 E-value=18 Score=24.16 Aligned_cols=39 Identities=21% Similarity=0.469 Sum_probs=34.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....++++..+++. +..+.|.+.+.
T Consensus 60 ~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l~v~r~ 98 (104)
T 1wi2_A 60 QEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISMRVRFF 98 (104)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEEEEEEC
Confidence 6789999999999999999999999998 78888888765
No 317
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=62.43 E-value=14 Score=24.51 Aligned_cols=40 Identities=25% Similarity=0.389 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+.
T Consensus 55 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 55 RKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 94 (104)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 5688888899999999999999999999999999998875
No 318
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=62.18 E-value=17 Score=23.42 Aligned_cols=41 Identities=29% Similarity=0.452 Sum_probs=36.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.+..
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 86 (91)
T 2pkt_A 46 CIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSE 86 (91)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 56899999999999999999999999988889999998754
No 319
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=61.69 E-value=13 Score=33.55 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=22.7
Q ss_pred CcEEEEEECCCCcccccCCCCCCCEEEEECCeecCC
Q psy10226 44 TSIYITKLIPGGAAASDGRLQVNDVIHQVNHVTVVD 79 (208)
Q Consensus 44 ~~i~I~~v~~gg~A~~~G~L~~gD~Il~Vng~~l~~ 79 (208)
..+||..+..... + +..||+|++|||+++..
T Consensus 96 G~i~V~dv~~~~s----~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 96 GRFYFVDIMTFSS----E-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp SCEEEEEECSSCC----S-SCTTCEEEEETTEEHHH
T ss_pred CcEEEEecccccc----C-CCCCCEEEEECCccHHH
Confidence 3578876633322 4 99999999999988763
No 320
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=61.52 E-value=19 Score=23.15 Aligned_cols=41 Identities=17% Similarity=0.346 Sum_probs=34.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+..+.+.+...+++.....+.+.+.+..
T Consensus 43 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 43 QEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 46889999999999999999999999988788889887754
No 321
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=61.09 E-value=20 Score=24.79 Aligned_cols=40 Identities=28% Similarity=0.386 Sum_probs=34.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc--CCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT--HERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~--~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....++++.++++.. +..+.|.+.|.
T Consensus 78 ~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 78 KAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp CSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 57899999999999999999999999875 67888888764
No 322
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=60.94 E-value=4.8 Score=27.44 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=37.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+.++.+.++..+++..+..+.|.+.+....
T Consensus 64 ~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 64 RVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp CTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 5688888899999999999999999999888999998876443
No 323
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=60.24 E-value=18 Score=24.29 Aligned_cols=41 Identities=32% Similarity=0.407 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.++.+.-+|++.+....+.++..+++..+..+.|.+.+..
T Consensus 59 ~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 59 RRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYRP 99 (113)
T ss_dssp CTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECCH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECc
Confidence 56889999999999999999999999988889999988653
No 324
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=59.17 E-value=24 Score=22.89 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=34.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.++.+.-+|++.+....+.++...++ .+..+.|.+.+...
T Consensus 48 ~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 48 KEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALTLLGSSS 88 (93)
T ss_dssp CSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEEEECCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEEEEECCC
Confidence 568899999999999999988888887 58899999987643
No 325
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=59.09 E-value=22 Score=22.68 Aligned_cols=40 Identities=25% Similarity=0.488 Sum_probs=34.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++...++. .+..+.|.+.+.
T Consensus 44 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 44 KEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQ 85 (88)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEE
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeC
Confidence 5688999999999999999999999985 467888888764
No 326
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=56.71 E-value=30 Score=23.50 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=37.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCccc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEPAL 134 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~~~ 134 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+.....
T Consensus 61 ~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 61 EYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVH 104 (117)
T ss_dssp CTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCCC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchh
Confidence 56899999999999999999888777778889999998765443
No 327
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=56.49 E-value=23 Score=23.71 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=36.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.|..
T Consensus 65 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 105 (110)
T 1x5q_A 65 RVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRES 105 (110)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECS
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECC
Confidence 56899999999999999999988888888899999998764
No 328
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=56.42 E-value=25 Score=24.08 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=34.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|++.+.+..+.++..+++...+.+.|.+.+.
T Consensus 70 ~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 70 AAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKL 109 (114)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 5688999999999999999999999998888888888654
No 329
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=55.51 E-value=28 Score=22.54 Aligned_cols=41 Identities=22% Similarity=0.328 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.|..
T Consensus 53 ~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 93 (97)
T 2w4f_A 53 RVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRER 93 (97)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCS
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCC
Confidence 57899999999999999998888888888999999998753
No 330
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.26 E-value=15 Score=24.39 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=37.3
Q ss_pred HHHHH-HHhCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 84 AAVEA-LKRAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 84 ~av~~-l~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
.|.+. =-+.++.+.-+|++.+... +.++..+++..+..+.|.+.|..
T Consensus 47 pA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~ 94 (100)
T 2edp_A 47 KAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRN 94 (100)
T ss_dssp HHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECC
T ss_pred HHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCC
Confidence 34443 2357899999999999986 88899999988888899998764
No 331
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=53.92 E-value=32 Score=23.47 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=35.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCC-eEEEEEccCCcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHE-RVNLLIGKFEPA 133 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~-~~~l~v~~~~~~ 133 (208)
+.|+.+.-+|++.+....+++..++++.... .+.|.+.+..+.
T Consensus 55 ~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~~~~ 98 (111)
T 1vae_A 55 KEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLLDS 98 (111)
T ss_dssp CTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEecCCC
Confidence 6799999999999999999999999988765 488888776433
No 332
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=53.03 E-value=20 Score=25.30 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=35.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|+..+.+..+.++.++++. .+..+.|.+.|.
T Consensus 69 ~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 69 QPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp CTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4588888899999999999999999987 478899999887
No 333
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.86 E-value=30 Score=22.73 Aligned_cols=40 Identities=23% Similarity=0.390 Sum_probs=34.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++...++. +..+.|.+.+..
T Consensus 55 ~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g 94 (100)
T 2eeh_A 55 CVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHMMVRRMG 94 (100)
T ss_dssp CSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEEEEEECS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEEEEEECC
Confidence 5789999999999999889999998887 688899888753
No 334
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=50.60 E-value=34 Score=22.70 Aligned_cols=42 Identities=19% Similarity=0.336 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+...
T Consensus 57 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 57 QENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKG 98 (107)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESC
T ss_pred CCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCC
Confidence 568899999999999999998888888888899999987543
No 335
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=50.39 E-value=28 Score=23.71 Aligned_cols=41 Identities=24% Similarity=0.375 Sum_probs=36.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+....+.++...++..+..+.|.+.+..
T Consensus 58 ~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 58 RKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 56888888999999999999999999988999999998754
No 336
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=50.05 E-value=16 Score=24.39 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=32.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEE
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLI 127 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v 127 (208)
+.|+.+.-+|++.+.+..+++...+++.....+.|.+
T Consensus 67 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 103 (104)
T 2z17_A 67 QAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIET 103 (104)
T ss_dssp CTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEEE
Confidence 5688888899999999999999999999877777765
No 337
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=49.46 E-value=35 Score=22.46 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=33.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc-CCeEEEEEcc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT-HERVNLLIGK 129 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~-~~~~~l~v~~ 129 (208)
+.|+.+.-+|++.+....++++...++.. +..+.|.+.|
T Consensus 64 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 64 QIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEc
Confidence 56899999999999999999999999764 5678888765
No 338
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=45.77 E-value=26 Score=26.30 Aligned_cols=41 Identities=15% Similarity=0.366 Sum_probs=36.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|+..+.+.++.++..+++. +..+.|.+.+...
T Consensus 129 ~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 129 QVGDEIVRINGYSISSCTHEEVINLIRT-EKTVSIKVRHIGL 169 (192)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEEEEEEECCE
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEEEEEEECCc
Confidence 5688898999999999999999999998 8999999987643
No 339
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=45.38 E-value=59 Score=22.34 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=35.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.+...+++..+..+.|.+.|...
T Consensus 65 ~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~ 106 (118)
T 2yub_A 65 HPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPV 106 (118)
T ss_dssp CTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSS
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCE
Confidence 678999999999999999999999998777788888877543
No 340
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=43.25 E-value=39 Score=23.40 Aligned_cols=42 Identities=26% Similarity=0.342 Sum_probs=35.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....++++...++. .+..+.|.+.+...
T Consensus 70 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 70 EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp CTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 5688898999999999999999998874 67888998887643
No 341
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=42.15 E-value=44 Score=25.85 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=33.6
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeE-EEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERV-NLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~-~l~v~~~ 130 (208)
+.|+.|.-+|++.+.++.+.+...+++..+..+ .|.+.+.
T Consensus 52 ~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R~ 92 (216)
T 2krg_A 52 RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (216)
T ss_dssp CTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEEC
Confidence 568888889999999999999999998877788 7777654
No 342
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=38.69 E-value=50 Score=23.37 Aligned_cols=42 Identities=24% Similarity=0.353 Sum_probs=35.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh-cCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA-THERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~-~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+....+.++..+++. .+..+.|.+.|...
T Consensus 83 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 83 QIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC-
T ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCE
Confidence 5789999999999999999999999987 45789999988644
No 343
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=35.87 E-value=64 Score=21.81 Aligned_cols=40 Identities=28% Similarity=0.454 Sum_probs=32.2
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEE-EEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVN-LLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~-l~v~~~ 130 (208)
+.|+.+.-+|++.+....+.++..+++.....+. +.+.+.
T Consensus 62 ~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 102 (119)
T 1x6d_A 62 QKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK 102 (119)
T ss_dssp CTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4688888899999999999999999988766544 555554
No 344
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=34.19 E-value=70 Score=20.63 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=32.3
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCe-EEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHER-VNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~-~~l~v~~~ 130 (208)
+.|+.+.-+|++.+...++.+..++++..... +.+.+.+.
T Consensus 52 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (98)
T 2jxo_A 52 RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (98)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 67899999999999999999999999887554 44666553
No 345
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=33.94 E-value=81 Score=21.42 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=34.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh---cCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA---THERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~---~~~~~~l~v~~~ 130 (208)
+.|+.+.-+|+..+.....++....++. .+..+.|+|...
T Consensus 58 ~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~~~ 100 (101)
T 3qik_A 58 QVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVATK 100 (101)
T ss_dssp CTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEecC
Confidence 6789999999999988899999999986 588899988753
No 346
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=32.48 E-value=56 Score=28.56 Aligned_cols=41 Identities=27% Similarity=0.356 Sum_probs=36.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~~ 131 (208)
+.|+.|.-+||..+.+.+++++..+|+. .++.++|.+.+..
T Consensus 42 ~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 42 EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 5688899999999999999999999998 7889999998853
No 347
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=32.38 E-value=93 Score=20.58 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=35.7
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhc-CCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKAT-HERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~-~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|+..+....+.+...+++.. +..+.|.+.+...
T Consensus 46 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 88 (112)
T 1qau_A 46 QAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE 88 (112)
T ss_dssp CTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCT
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCc
Confidence 67899999999999999999999999875 5788898887643
No 348
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.31 E-value=89 Score=21.27 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=33.0
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+|++.+..+.+.+...+++.. .+.|.+.+...
T Consensus 63 ~~GD~Il~Ing~~v~~~~~~~~~~~l~~~--~v~l~v~R~p~ 102 (114)
T 2d8i_A 63 KAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVRTYPE 102 (114)
T ss_dssp CTTCCEEEESSCBGGGCCHHHHHHHHTSS--EEEEEEEECCC
T ss_pred CCCCEEEEECCEECCCcCHHHHHHHHhCC--cEEEEEEECCC
Confidence 57899999999999999889998888754 78888877543
No 349
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=31.81 E-value=50 Score=23.70 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=28.1
Q ss_pred ccccccCCCCCcceEEEEEEeCC----CcccEEEecc
Q psy10226 2 SCEKVNGGDSEWEYEEIRLERGG----AGLGFSIAGG 34 (208)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~l~k~~----~~lGf~i~gg 34 (208)
|||+....+.-|++....-+|.. ..++|.|.+-
T Consensus 5 ~cpv~~~gd~vwkIs~F~~RKpeGty~nsvsFnI~aT 41 (133)
T 3v0r_A 5 SCPVTTEGDYVWKISEFYGRKPEGTYYNSLGFNIKAT 41 (133)
T ss_dssp CSSSCCCCTTEEEEEEEEEEETTSSSCSEEEEEEEES
T ss_pred CCccccCCceEEEeeeeeeEcCCCCceeeEEEEEEec
Confidence 79999999999999999998852 4589999983
No 350
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=35.33 E-value=12 Score=25.80 Aligned_cols=38 Identities=21% Similarity=0.388 Sum_probs=31.4
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIG 128 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~ 128 (208)
+.|+.+.-+|++.+.+.++.++..+++..++.+.|.+.
T Consensus 73 ~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 73 HVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 56888888999999999999999999887777776653
No 351
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=28.40 E-value=32 Score=21.08 Aligned_cols=40 Identities=15% Similarity=0.226 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHhCCCEEEEeeeeeCCCCCHHHHHHHHHhc
Q psy10226 80 VPHSAAVEALKRAGNVVTLLGEKNLENVTHEEAVATLKAT 119 (208)
Q Consensus 80 ~t~~~av~~l~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~ 119 (208)
++-++....|++.|+.+.+-.-..-.++..+++...|+.-
T Consensus 10 ~~e~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrL 49 (59)
T 2xvc_A 10 ITERELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEAL 49 (59)
T ss_dssp CCHHHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHH
Confidence 5678899999999999998555555677888888877663
No 352
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=28.09 E-value=57 Score=23.48 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=23.4
Q ss_pred CCcccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhC
Q psy10226 54 GGAAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRA 92 (208)
Q Consensus 54 gg~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~ 92 (208)
|.+-.-.-++++|..|++|.|+ +.+.|.++|+.+
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv-----~~~~A~eAlr~a 121 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGV-----AENIARRAVAIA 121 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSS-----CTTHHHHHHHHH
T ss_pred CCceEEEEEECCCCEEEEEecC-----CHHHHHHHHHHH
Confidence 3455555569999999999993 345666666654
No 353
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=27.84 E-value=76 Score=21.15 Aligned_cols=39 Identities=23% Similarity=0.379 Sum_probs=32.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEccC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIGKF 130 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~~~ 130 (208)
+.++.+.-+|++.+....+.++..+++.. ..+.+.+.+.
T Consensus 60 ~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 60 EIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLTISIVAA 98 (114)
T ss_dssp CTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEEEEECSS
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEEEEEEcC
Confidence 46888988999999999888888888876 5788888776
No 354
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=25.87 E-value=57 Score=25.61 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=33.1
Q ss_pred cCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEE
Q psy10226 60 DGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVV 96 (208)
Q Consensus 60 ~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v 96 (208)
.|.+..|++++-|+++--.+-|...++++|++.|..+
T Consensus 131 ~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~v 167 (234)
T 3m3h_A 131 EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEV 167 (234)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEE
T ss_pred ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEE
Confidence 3557889999999999999999999999999998755
No 355
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=24.88 E-value=94 Score=26.25 Aligned_cols=42 Identities=26% Similarity=0.342 Sum_probs=36.9
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHh--cCCeEEEEEccCCc
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKA--THERVNLLIGKFEP 132 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~--~~~~~~l~v~~~~~ 132 (208)
+.|+.+.-+||..+.+.+++++..+++. .++.+.|.+.+...
T Consensus 50 ~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 50 EEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp CTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCc
Confidence 6788999999999999999999999985 68889999987643
No 356
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=24.30 E-value=91 Score=20.66 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=29.4
Q ss_pred HhCCCEEEEeeeeeCCCCCHHHHHHHHHhcCCeEEEEEc
Q psy10226 90 KRAGNVVTLLGEKNLENVTHEEAVATLKATHERVNLLIG 128 (208)
Q Consensus 90 ~~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~~~~l~v~ 128 (208)
-+.|+.+.-+|++.+..+.+++..++++.. .+++.+.
T Consensus 53 L~~GD~Il~vng~~v~~~~~~~l~~~l~~~--~l~ltV~ 89 (94)
T 3kzd_A 53 LKAGDEILEINNRAADALNSSMLKDFLSQP--SLGLLVR 89 (94)
T ss_dssp CCTTCEEEEETTEEGGGCCHHHHHHHHHSS--EEEEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHhCC--eEEEEEE
Confidence 367899999999999999999999988754 4555443
No 357
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=23.82 E-value=65 Score=25.44 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=33.1
Q ss_pred cCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCCEE
Q psy10226 60 DGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGNVV 96 (208)
Q Consensus 60 ~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~~v 96 (208)
.|.+..|++++-|+++--.+-|-.+++++|++.|..+
T Consensus 143 eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~v 179 (243)
T 3dez_A 143 EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADV 179 (243)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEE
T ss_pred EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEE
Confidence 3557889999999999999999999999999998754
No 358
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=22.08 E-value=1.5e+02 Score=18.23 Aligned_cols=45 Identities=9% Similarity=0.126 Sum_probs=23.9
Q ss_pred EEEEeCCCcccEEEeccCCCCCCCCCCcEEEEEECCCCcccccCCCCCCCEEEE
Q psy10226 18 IRLERGGAGLGFSIAGGTDNPHIGDDTSIYITKLIPGGAAASDGRLQVNDVIHQ 71 (208)
Q Consensus 18 v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~v~~gg~A~~~G~L~~gD~Il~ 71 (208)
|+--....||||-.... +...+|+..-.-..... ..|..||++--
T Consensus 6 Vk~fn~~kGfGFI~~~~-------gg~dvFvH~s~i~~~g~--~~l~~G~~V~f 50 (67)
T 3cam_A 6 VKWFNDAKGFGFITPDE-------GGEDLFAHFSAINMEGF--KTLKEGQRVSF 50 (67)
T ss_dssp EEEEETTTTEEEEEETT-------SCCCEEEEGGGBCGGGG--SSCCTTCEEEE
T ss_pred EEEEECCCCeEEEecCC-------CCccEEEEHHHccccCC--CCCCCCCEEEE
Confidence 44444578999954431 13457765422221111 24889998754
No 359
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=21.27 E-value=1.6e+02 Score=18.29 Aligned_cols=44 Identities=11% Similarity=0.286 Sum_probs=24.2
Q ss_pred EEEEEeCCCcccEEEeccCCCCCCCCCCcEEEEE--ECCCCcccccCCCCCCCEEEE
Q psy10226 17 EIRLERGGAGLGFSIAGGTDNPHIGDDTSIYITK--LIPGGAAASDGRLQVNDVIHQ 71 (208)
Q Consensus 17 ~v~l~k~~~~lGf~i~gg~~~~~~~~~~~i~I~~--v~~gg~A~~~G~L~~gD~Il~ 71 (208)
+|+--....||||-.... +...+|+.. +...+ .. .|..||+|--
T Consensus 9 ~Vk~fn~~kGfGFI~~~~-------g~~dvFvH~s~i~~~g---~~-~l~~G~~V~f 54 (71)
T 3i2z_B 9 NVKWFNESKGFGFITPED-------GSKDVFVHFSAIQTNG---FK-TLAEGQRVEF 54 (71)
T ss_dssp EEEEEETTTTEEEEEETT-------CCCCEEEEGGGBCCSS---CC-CCCTTCEEEE
T ss_pred EEEEEECCCCcEEEecCC-------CCccEEEEhHHccccc---Cc-CCCCCCEEEE
Confidence 444444678999954431 134577653 32222 11 3889998753
No 360
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=20.48 E-value=1.9e+02 Score=19.44 Aligned_cols=41 Identities=17% Similarity=0.275 Sum_probs=33.5
Q ss_pred hCCCEEEEeeeeeCCCCCHHHHHHHHHhcCC-eEEEEEccCC
Q psy10226 91 RAGNVVTLLGEKNLENVTHEEAVATLKATHE-RVNLLIGKFE 131 (208)
Q Consensus 91 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~~~-~~~l~v~~~~ 131 (208)
+.|+.+.-+|++.+...++.+...+++.... .+.+.+.+..
T Consensus 52 ~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g 93 (128)
T 2kjd_A 52 RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRET 93 (128)
T ss_dssp CTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHH
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCC
Confidence 6789999999999999999999999988744 4557777653
No 361
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=20.41 E-value=69 Score=25.07 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=20.5
Q ss_pred ccccCCCCCCCEEEEECCeecCCC
Q psy10226 57 AASDGRLQVNDVIHQVNHVTVVDV 80 (208)
Q Consensus 57 A~~~G~L~~gD~Il~Vng~~l~~~ 80 (208)
+.++| +.+|..++++||.++.+.
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTT
T ss_pred cccCC-ccccceeeecCCccCCCc
Confidence 56778 999999999999999975
No 362
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=20.05 E-value=74 Score=22.27 Aligned_cols=35 Identities=3% Similarity=0.028 Sum_probs=24.1
Q ss_pred cccccCCCCCCCEEEEECCeecCCCCHHHHHHHHHhCCC
Q psy10226 56 AAASDGRLQVNDVIHQVNHVTVVDVPHSAAVEALKRAGN 94 (208)
Q Consensus 56 ~A~~~G~L~~gD~Il~Vng~~l~~~t~~~av~~l~~~~~ 94 (208)
+-.-.-++++|..|++|.| + .+.+.|.++|+.+..
T Consensus 77 ~~~wva~Vk~G~ilfEi~g-~---~~~~~a~eAlr~a~~ 111 (118)
T 2ftc_I 77 IDHYVTPVKAGRLVVEMGG-R---CEFEEVQGFLDQVAH 111 (118)
T ss_pred ccEEEEEECCCCEEEEEec-c---CCHHHHHHHHHHHHh
Confidence 3333345888999999998 2 456777888876543
Done!