Query psy10229
Match_columns 231
No_of_seqs 244 out of 1254
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 21:11:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tvt_A Disks large 1 tumor sup 100.0 7.2E-51 2.5E-55 366.9 13.8 198 10-231 5-228 (292)
2 1kjw_A Postsynaptic density pr 100.0 1.9E-41 6.5E-46 305.0 14.6 202 11-231 2-233 (295)
3 2xkx_A Disks large homolog 4; 100.0 3.1E-39 1E-43 319.6 17.3 202 10-230 427-658 (721)
4 3kfv_A Tight junction protein 100.0 2.7E-36 9.3E-41 274.2 12.0 182 11-230 5-236 (308)
5 3tsz_A Tight junction protein 100.0 2E-34 6.8E-39 268.3 13.8 183 9-230 105-327 (391)
6 3shw_A Tight junction protein 100.0 4.9E-33 1.7E-37 264.9 14.4 170 32-230 112-319 (468)
7 4dey_A Voltage-dependent L-typ 100.0 2.4E-29 8.2E-34 230.8 7.6 191 8-230 36-268 (337)
8 1ex7_A Guanylate kinase; subst 100.0 3E-28 1E-32 206.2 11.6 110 112-230 1-131 (186)
9 3ney_A 55 kDa erythrocyte memb 99.9 2.8E-24 9.5E-29 183.7 8.3 111 106-225 13-143 (197)
10 1kgd_A CASK, peripheral plasma 99.8 1.8E-18 6.3E-23 142.1 8.9 111 110-229 3-133 (180)
11 3a00_A Guanylate kinase, GMP k 99.7 6.1E-18 2.1E-22 139.4 9.6 109 112-229 1-130 (186)
12 3tau_A Guanylate kinase, GMP k 99.7 1E-17 3.6E-22 140.7 10.2 110 111-229 7-136 (208)
13 2qor_A Guanylate kinase; phosp 99.7 4.6E-16 1.6E-20 129.6 12.0 111 110-229 10-142 (204)
14 1lvg_A Guanylate kinase, GMP k 99.6 1.6E-14 5.3E-19 120.8 10.6 110 111-229 3-132 (198)
15 1s96_A Guanylate kinase, GMP k 99.5 5.6E-14 1.9E-18 120.6 12.2 111 110-229 14-145 (219)
16 3tr0_A Guanylate kinase, GMP k 99.3 4.2E-11 1.4E-15 98.0 12.4 108 112-229 7-134 (205)
17 3lnc_A Guanylate kinase, GMP k 99.2 3.8E-11 1.3E-15 101.4 9.7 109 111-229 26-156 (231)
18 1z6g_A Guanylate kinase; struc 99.1 7.6E-10 2.6E-14 93.6 12.1 111 110-229 21-153 (218)
19 2j41_A Guanylate kinase; GMP, 99.0 3.8E-09 1.3E-13 86.2 11.3 109 111-229 5-134 (207)
20 1znw_A Guanylate kinase, GMP k 98.2 1.4E-05 4.7E-10 66.2 11.9 111 109-229 17-149 (207)
21 1gvn_B Zeta; postsegregational 97.5 3.4E-05 1.2E-09 68.0 2.4 103 111-227 32-153 (287)
22 3a8t_A Adenylate isopentenyltr 96.7 0.0011 3.8E-08 60.7 4.4 103 112-229 40-189 (339)
23 3eph_A TRNA isopentenyltransfe 96.4 0.00033 1.1E-08 65.7 -1.6 70 113-197 3-96 (409)
24 3exa_A TRNA delta(2)-isopenten 96.1 0.0019 6.6E-08 58.8 1.9 71 112-197 3-97 (322)
25 3foz_A TRNA delta(2)-isopenten 95.9 0.0024 8.2E-08 58.0 1.8 74 111-198 9-105 (316)
26 2csi_A RIM-BP2, RIM binding pr 94.9 0.014 4.8E-07 41.2 2.6 37 13-50 10-55 (76)
27 2ege_A Uncharacterized protein 94.7 0.023 7.9E-07 40.0 3.2 37 13-50 10-55 (75)
28 1qhx_A CPT, protein (chloramph 94.5 0.099 3.4E-06 40.9 6.9 26 112-137 3-31 (178)
29 2lx7_A GAS-7, growth arrest-sp 93.4 0.038 1.3E-06 38.0 2.3 28 23-50 9-44 (60)
30 1nm7_A Peroxisomal membrane pr 93.0 0.044 1.5E-06 38.6 2.0 33 19-51 9-54 (69)
31 2csq_A RIM-BP2, RIM binding pr 92.9 0.018 6.3E-07 42.6 -0.0 19 32-50 39-66 (97)
32 2ze6_A Isopentenyl transferase 92.9 0.043 1.5E-06 46.8 2.3 22 113-134 2-26 (253)
33 1g2b_A Spectrin alpha chain; c 92.5 0.048 1.6E-06 36.8 1.6 28 22-50 26-61 (62)
34 3tlx_A Adenylate kinase 2; str 92.2 0.071 2.4E-06 45.1 2.7 99 112-223 29-146 (243)
35 2ke9_A Caskin-2; SH3 domain, A 91.8 0.11 3.8E-06 37.5 3.0 18 34-51 35-60 (83)
36 2fei_A CD2-associated protein; 91.8 0.083 2.8E-06 36.3 2.2 27 23-50 7-41 (65)
37 1hsq_A Phospholipase C-gamma ( 91.8 0.13 4.4E-06 35.5 3.2 29 21-50 10-46 (71)
38 1k4u_S Phagocyte NADPH oxidase 91.6 0.077 2.6E-06 35.6 1.9 26 24-50 12-45 (62)
39 2ed1_A 130 kDa phosphatidylino 91.5 0.083 2.8E-06 37.1 2.0 26 25-51 18-51 (76)
40 1sem_A SEM-5; SRC-homology 3 ( 91.4 0.06 2.1E-06 35.5 1.1 25 25-50 10-42 (58)
41 1tg0_A BBC1 protein, myosin ta 91.3 0.084 2.9E-06 36.2 1.8 19 34-52 23-49 (68)
42 2d8j_A FYN-related kinase; SH3 91.3 0.13 4.6E-06 35.8 2.9 27 24-51 14-48 (77)
43 1jo8_A ABP1P, actin binding pr 91.2 0.079 2.7E-06 35.1 1.6 26 25-51 8-41 (58)
44 1b07_A Protein (proto-oncogene 91.2 0.082 2.8E-06 36.2 1.7 25 25-50 11-43 (65)
45 1k1z_A VAV; SH3, proto-oncogen 91.2 0.15 5.3E-06 35.7 3.2 19 33-51 33-60 (78)
46 3rnj_A Brain-specific angiogen 91.1 0.088 3E-06 35.9 1.8 17 35-51 25-50 (67)
47 2c95_A Adenylate kinase 1; tra 91.1 0.26 8.8E-06 38.9 4.8 24 111-134 8-34 (196)
48 2v54_A DTMP kinase, thymidylat 91.0 0.86 2.9E-05 36.1 7.9 22 112-133 4-28 (204)
49 2dl4_A Protein STAC; SH3 domai 90.9 0.1 3.4E-06 35.8 1.9 26 24-50 14-47 (68)
50 2g6f_X RHO guanine nucleotide 90.8 0.075 2.6E-06 35.3 1.1 18 33-50 19-44 (59)
51 2oaw_A Spectrin alpha chain, b 90.7 0.096 3.3E-06 35.2 1.6 26 25-51 9-42 (65)
52 2cud_A SRC-like-adapter; SH3 d 90.7 0.1 3.6E-06 37.0 1.9 29 22-51 22-57 (79)
53 1uti_A GRB2-related adaptor pr 90.7 0.079 2.7E-06 35.0 1.2 25 25-50 9-41 (58)
54 1awj_A ITK; transferase, regul 90.6 0.19 6.6E-06 35.2 3.2 30 20-50 23-60 (77)
55 2gqi_A RAS GTPase-activating p 90.6 0.13 4.6E-06 35.5 2.3 27 23-50 13-48 (71)
56 2b86_A Cytoplasmic protein NCK 90.5 0.11 3.6E-06 36.2 1.8 26 25-51 12-44 (67)
57 1y0m_A 1-phosphatidylinositol- 90.4 0.12 4E-06 34.6 1.9 26 24-50 10-43 (61)
58 1uj0_A Signal transducing adap 90.4 0.12 4E-06 34.7 1.9 26 25-51 13-46 (62)
59 1zlm_A Osteoclast stimulating 90.4 0.083 2.8E-06 35.0 1.1 26 24-50 10-43 (58)
60 2bz8_A SH3-domain kinase bindi 90.4 0.088 3E-06 34.8 1.2 17 34-50 17-41 (58)
61 2ecz_A Sorbin and SH3 domain-c 90.4 0.14 4.9E-06 35.0 2.3 27 25-52 15-49 (70)
62 1zx6_A YPR154WP; SH3 domain, p 90.3 0.088 3E-06 34.8 1.1 25 25-50 10-42 (58)
63 2ak5_A RHO guanine nucleotide 90.3 0.089 3E-06 35.5 1.2 17 34-50 22-46 (64)
64 2nwm_A Vinexin; cell adhesion; 90.2 0.091 3.1E-06 36.1 1.2 25 25-50 9-41 (65)
65 4esr_A Jouberin; AHI-1, AHI1, 90.2 0.11 3.9E-06 35.4 1.7 25 25-50 14-46 (69)
66 3crm_A TRNA delta(2)-isopenten 90.1 0.044 1.5E-06 49.6 -0.6 23 112-134 5-30 (323)
67 1w70_A Neutrophil cytosol fact 90.1 0.093 3.2E-06 35.0 1.1 25 25-50 12-44 (60)
68 2l0a_A STAM-1, signal transduc 90.1 0.11 3.8E-06 36.6 1.6 18 34-51 33-58 (72)
69 1wi7_A SH3-domain kinase bindi 90.1 0.13 4.4E-06 35.1 1.9 26 24-50 14-47 (68)
70 1cka_A C-CRK N-terminal SH3 do 90.1 0.12 3.9E-06 34.1 1.5 27 24-51 8-42 (57)
71 3t61_A Gluconokinase; PSI-biol 90.0 0.8 2.7E-05 36.7 6.9 100 112-228 18-125 (202)
72 2gnc_A SLIT-ROBO RHO GTPase-ac 90.0 0.096 3.3E-06 35.0 1.1 17 34-50 22-46 (60)
73 2vwf_A Growth factor receptor- 90.0 0.13 4.3E-06 33.9 1.7 26 24-50 9-42 (58)
74 1aww_A ATK, AMGX1, BPK, bruton 90.0 0.21 7.2E-06 33.9 2.9 28 22-50 13-48 (67)
75 2rqv_A BUD emergence protein 1 90.0 0.16 5.4E-06 38.8 2.5 29 23-52 11-47 (108)
76 2ew3_A SH3-containing GRB2-lik 89.9 0.099 3.4E-06 36.2 1.2 25 25-50 11-43 (68)
77 3h0h_A Proto-oncogene tyrosine 89.8 0.12 4.3E-06 35.6 1.7 27 24-51 22-56 (73)
78 1x2k_A OSTF1, osteoclast stimu 89.8 0.14 4.7E-06 35.0 1.9 25 25-50 15-47 (68)
79 2o9s_A Ponsin; SH3 domain, sig 89.8 0.14 4.7E-06 34.9 1.8 19 34-52 22-48 (67)
80 2jw4_A Cytoplasmic protein NCK 89.6 0.19 6.4E-06 34.9 2.5 29 22-51 12-47 (72)
81 3c0c_A Endophilin-A2; endocyto 89.6 0.11 3.6E-06 36.2 1.1 28 22-50 18-53 (73)
82 2lj0_A Sorbin and SH3 domain-c 89.6 0.16 5.5E-06 35.2 2.0 28 23-51 12-47 (65)
83 3ulr_B SRC substrate cortactin 89.6 0.11 3.7E-06 35.0 1.1 24 26-50 18-49 (65)
84 2iim_A Proto-oncogene tyrosine 89.5 0.14 4.9E-06 34.2 1.7 27 24-51 13-46 (62)
85 1x2q_A Signal transducing adap 89.4 0.17 5.8E-06 36.5 2.1 26 25-51 25-58 (88)
86 3ngp_A Spectrin alpha chain, b 89.3 0.12 4E-06 34.4 1.1 24 26-50 15-46 (62)
87 1ruw_A Myosin-3 isoform, MYO3; 89.3 0.15 5E-06 34.9 1.7 20 32-51 17-44 (69)
88 4eaq_A DTMP kinase, thymidylat 89.3 0.33 1.1E-05 40.8 4.2 25 111-135 25-52 (229)
89 1x2p_A Protein arginine N-meth 89.3 0.18 6.2E-06 34.3 2.1 25 25-50 15-47 (68)
90 3zvl_A Bifunctional polynucleo 89.2 1.1 3.6E-05 41.1 7.9 88 109-229 255-352 (416)
91 3dl0_A Adenylate kinase; phosp 89.1 0.4 1.4E-05 38.8 4.5 20 115-134 3-25 (216)
92 2ysq_A RHO guanine nucleotide 88.9 0.17 5.9E-06 35.8 1.9 18 34-51 26-51 (81)
93 2kxd_A 11-MER peptide, SH3 dom 88.9 0.17 5.7E-06 35.2 1.8 17 34-50 15-39 (73)
94 1wie_A RIM binding protein 2; 88.9 0.36 1.2E-05 35.5 3.6 19 32-50 37-64 (96)
95 2xmf_A Myosin 1E SH3; motor pr 88.9 0.17 5.7E-06 33.7 1.7 25 25-50 13-45 (60)
96 1udl_A Intersectin 2, KIAA1256 88.9 0.25 8.7E-06 36.2 2.8 27 23-50 40-74 (98)
97 2egc_A SH3 and PX domain-conta 88.8 0.16 5.4E-06 35.6 1.6 19 34-52 25-51 (75)
98 1wxb_A Epidermal growth factor 88.8 0.19 6.5E-06 34.4 2.0 27 23-50 13-46 (68)
99 2k2m_A EPS8-like protein 1; al 88.8 0.17 5.7E-06 34.8 1.6 28 23-51 14-48 (68)
100 3eg3_A Proto-oncogene tyrosine 88.8 0.13 4.5E-06 34.2 1.1 25 25-50 13-46 (63)
101 3kb2_A SPBC2 prophage-derived 88.8 0.95 3.3E-05 34.6 6.2 21 114-134 3-26 (173)
102 3trf_A Shikimate kinase, SK; a 88.7 0.41 1.4E-05 37.6 4.2 22 112-133 5-29 (185)
103 1uhf_A Intersectin 2; beta bar 88.7 0.21 7.3E-06 34.3 2.2 25 25-50 16-47 (69)
104 2v1q_A SLA1, cytoskeleton asse 88.7 0.18 6E-06 33.4 1.7 26 25-51 10-44 (60)
105 2ebp_A SAM and SH3 domain-cont 88.7 0.17 5.8E-06 35.4 1.7 18 33-50 26-51 (73)
106 1z9q_A Neutrophil cytosol fact 88.7 0.16 5.5E-06 36.5 1.6 28 22-50 23-58 (79)
107 2drm_A Acanthamoeba myosin IB; 88.7 0.18 6.1E-06 33.1 1.7 17 34-50 19-43 (58)
108 1gl5_A Tyrosine-protein kinase 88.7 0.17 5.7E-06 34.5 1.6 27 24-51 9-43 (67)
109 1gcq_C VAV proto-oncogene; SH3 88.6 0.18 6.1E-06 34.5 1.7 18 34-51 26-52 (70)
110 1i07_A Epidermal growth factor 88.5 0.19 6.5E-06 33.4 1.7 27 24-51 8-41 (60)
111 2eyx_A V-CRK sarcoma virus CT1 88.4 0.13 4.5E-06 35.2 0.9 17 34-50 24-48 (67)
112 3u23_A CD2-associated protein; 88.4 0.14 4.9E-06 34.2 1.1 18 33-50 22-47 (65)
113 2i0n_A Class VII unconventiona 88.3 0.13 4.5E-06 36.5 0.9 17 34-50 26-51 (80)
114 1ugv_A KIAA0621, olygophrenin- 88.3 0.18 6.1E-06 35.0 1.6 28 22-50 15-51 (72)
115 1ujy_A RHO guanine nucleotide 88.3 0.18 6E-06 35.3 1.5 17 34-50 26-50 (76)
116 2eqi_A Phospholipase C, gamma 88.3 0.21 7.1E-06 34.1 1.9 18 34-51 23-48 (69)
117 2dbm_A SH3-containing GRB2-lik 88.3 0.15 5.3E-06 35.3 1.2 17 34-50 23-47 (73)
118 2dl3_A Sorbin and SH3 domain-c 88.1 0.19 6.5E-06 34.2 1.6 17 34-50 23-47 (68)
119 1yn8_A NBP2, NAP1-binding prot 88.0 0.21 7.2E-06 32.8 1.7 25 26-51 10-42 (59)
120 4f14_A Nebulette; SH3 domain, 88.0 0.21 7.1E-06 33.3 1.7 25 26-51 15-47 (64)
121 2ega_A SH3 and PX domain-conta 88.0 0.28 9.7E-06 33.5 2.4 28 22-50 13-48 (70)
122 4e6r_A Cytoplasmic protein NCK 87.9 0.17 5.7E-06 33.1 1.1 23 26-49 10-40 (58)
123 2djq_A SH3 domain containing r 87.9 0.2 6.7E-06 34.2 1.5 25 25-50 15-47 (68)
124 2rhm_A Putative kinase; P-loop 87.8 1.5 5.1E-05 34.2 7.0 22 112-133 5-29 (193)
125 2fpe_A C-JUN-amino-terminal ki 87.8 0.21 7.2E-06 33.4 1.6 26 24-50 10-43 (62)
126 2v1r_A Peroxisomal membrane pr 87.7 0.23 7.9E-06 34.8 1.9 28 23-50 20-60 (80)
127 2vkn_A Protein SSU81; membrane 87.7 0.23 7.8E-06 34.1 1.8 18 34-51 23-47 (70)
128 3cqt_A P59-FYN, proto-oncogene 87.7 0.2 6.9E-06 35.6 1.6 28 23-51 11-46 (79)
129 2j6f_A CD2-associated protein; 87.7 0.17 5.9E-06 33.9 1.1 25 25-50 9-42 (62)
130 2yup_A Vinexin; sorbin and SH3 87.7 0.24 8.2E-06 35.8 2.0 26 25-51 25-58 (90)
131 2dmo_A Neutrophil cytosol fact 87.6 0.19 6.5E-06 34.4 1.3 27 23-50 13-47 (68)
132 1x69_A Cortactin isoform A; SH 87.6 0.19 6.6E-06 35.4 1.4 26 24-50 24-57 (79)
133 3fb4_A Adenylate kinase; psych 87.6 1.5 5.1E-05 35.2 7.0 19 115-133 3-24 (216)
134 1zuy_A Myosin-5 isoform; SH3 d 87.6 0.22 7.4E-06 32.6 1.6 18 34-51 17-42 (58)
135 4glm_A Dynamin-binding protein 87.6 0.18 6.2E-06 34.5 1.2 17 34-50 29-53 (72)
136 2pqh_A Spectrin alpha chain, b 87.5 0.18 6E-06 35.8 1.1 17 34-50 18-42 (80)
137 2dl8_A SLIT-ROBO RHO GTPase-ac 87.3 0.23 7.8E-06 34.3 1.6 17 34-50 25-49 (72)
138 2dbk_A CRK-like protein; struc 87.3 0.22 7.6E-06 35.9 1.6 17 34-50 34-58 (88)
139 2dnu_A RUH-061, SH3 multiple d 87.2 0.28 9.5E-06 33.6 2.0 28 23-51 14-49 (71)
140 1ue9_A Intersectin 2; beta bar 87.2 0.27 9.4E-06 34.5 2.0 18 34-51 23-48 (80)
141 3thk_A Spectrin alpha chain, b 87.2 0.26 8.8E-06 33.9 1.8 24 26-50 14-45 (73)
142 1csk_A C-SRC SH3 domain; phosp 87.2 0.24 8.3E-06 34.0 1.7 25 25-50 19-52 (71)
143 2bzy_A CRK-like protein, CRKL 87.2 0.15 5.3E-06 34.8 0.6 18 33-50 18-43 (67)
144 2lcs_A NAP1-binding protein 2; 87.1 0.24 8.3E-06 34.6 1.7 26 25-51 13-46 (73)
145 2x3w_D Syndapin I, protein kin 87.0 0.23 7.9E-06 32.8 1.4 18 34-51 19-45 (60)
146 2j05_A RAS GTPase-activating p 87.0 0.25 8.5E-06 33.4 1.7 27 23-50 11-46 (65)
147 4d8k_A Tyrosine-protein kinase 87.0 0.22 7.7E-06 40.1 1.7 27 24-51 19-52 (175)
148 2jte_A CD2-associated protein; 87.0 0.19 6.7E-06 33.7 1.1 26 24-50 13-48 (64)
149 2yun_A Nostrin; nitric oxide s 87.0 0.23 8E-06 34.9 1.6 17 34-50 23-47 (79)
150 2yuq_A Tyrosine-protein kinase 86.8 0.24 8.2E-06 35.4 1.5 28 22-50 24-59 (85)
151 2ed0_A ABL interactor 2; coile 86.8 0.2 6.7E-06 35.3 1.0 25 25-50 25-57 (78)
152 2yuo_A CIP85, RUN and TBC1 dom 86.8 0.2 7E-06 35.1 1.1 17 34-50 23-47 (78)
153 1wxt_A Hypothetical protein FL 86.8 0.26 9E-06 33.7 1.6 17 34-50 23-46 (68)
154 2dil_A Proline-serine-threonin 86.7 0.31 1.1E-05 33.2 2.0 26 24-50 15-48 (69)
155 2kym_A BUD emergence protein 1 86.7 0.37 1.3E-05 37.1 2.6 26 25-51 11-44 (120)
156 1zuu_A BZZ1 protein; SH3 domai 86.6 0.28 9.7E-06 32.1 1.7 26 25-51 9-43 (58)
157 1s1n_A Nephrocystin 1; beta ba 86.6 0.24 8.1E-06 33.7 1.3 25 25-50 18-50 (68)
158 2o2o_A SH3-domain kinase-bindi 86.6 0.26 8.9E-06 36.3 1.7 26 24-50 25-58 (92)
159 2kgt_A Tyrosine-protein kinase 86.5 0.34 1.2E-05 33.2 2.2 27 24-51 17-50 (72)
160 1w1f_A Tyrosine-protein kinase 86.5 0.29 9.8E-06 32.9 1.7 26 25-51 15-47 (65)
161 2ydl_A SH3 domain-containing k 86.4 0.23 7.8E-06 34.4 1.2 26 24-50 9-44 (69)
162 1j3t_A Intersectin 2; beta bar 86.4 0.36 1.2E-05 33.5 2.2 25 25-50 18-49 (74)
163 2p5t_B PEZT; postsegregational 86.3 0.77 2.6E-05 38.7 4.7 24 111-134 31-57 (253)
164 1tuc_A Alpha-spectrin; capping 86.2 0.16 5.4E-06 34.4 0.3 17 34-50 5-29 (63)
165 1x6g_A Megakaryocyte-associate 86.2 0.29 1E-05 34.8 1.7 26 24-50 24-58 (81)
166 2a28_A BZZ1 protein; SH3 domai 86.1 0.35 1.2E-05 31.3 2.0 25 25-50 8-41 (54)
167 3qwx_X Cell death abnormality 86.1 0.27 9.2E-06 39.6 1.7 28 22-50 123-158 (174)
168 2yt6_A Adult MALE urinary blad 86.1 0.34 1.2E-05 36.0 2.1 29 22-51 32-68 (109)
169 2oi3_A Tyrosine-protein kinase 86.1 0.34 1.1E-05 34.4 2.0 28 23-51 31-65 (86)
170 1jqq_A PEX13P, peroxisomal mem 86.0 0.27 9.3E-06 35.5 1.5 26 25-50 22-60 (92)
171 2cuc_A SH3 domain containing r 85.9 0.36 1.2E-05 32.9 2.0 28 22-50 12-47 (70)
172 2kxc_A Brain-specific angiogen 85.8 0.31 1.1E-05 33.0 1.6 18 34-51 23-49 (67)
173 2dl7_A KIAA0769 protein; SH3 d 85.8 0.25 8.6E-06 34.2 1.1 17 34-50 24-51 (73)
174 1oot_A Hypothetical 40.4 kDa p 85.7 0.33 1.1E-05 32.1 1.7 25 25-50 11-45 (60)
175 2fpf_A C-JUN-amino-terminal ki 85.7 0.32 1.1E-05 33.5 1.6 27 23-50 12-46 (71)
176 2cre_A HEF-like protein; SH3 d 85.6 0.39 1.3E-05 32.8 2.1 25 25-50 15-50 (71)
177 1wyx_A CRK-associated substrat 85.5 0.26 9E-06 33.6 1.1 17 34-50 19-46 (69)
178 2cub_A Cytoplasmic protein NCK 85.5 0.34 1.2E-05 34.9 1.8 24 26-50 26-57 (88)
179 3reb_B Tyrosine-protein kinase 85.3 0.33 1.1E-05 34.9 1.7 25 26-51 12-43 (90)
180 2ct3_A Vinexin; SH3 domian, st 85.2 0.32 1.1E-05 33.1 1.5 26 25-51 15-48 (70)
181 2jmc_A Spectrin alpha chain, b 85.1 0.2 7E-06 35.2 0.4 17 34-50 7-31 (77)
182 1gbq_A GRB2; complex (signal t 85.1 0.28 9.6E-06 34.1 1.1 17 34-50 25-50 (74)
183 1u5s_A Cytoplasmic protein NCK 85.0 0.41 1.4E-05 32.7 2.0 27 23-50 12-48 (71)
184 2dl5_A KIAA0769 protein; SH3 d 84.9 0.33 1.1E-05 34.1 1.4 26 25-51 21-55 (78)
185 2rqr_A CED-12 homolog, engulfm 84.7 0.38 1.3E-05 37.0 1.8 28 23-51 65-99 (119)
186 1ukz_A Uridylate kinase; trans 84.7 2 6.9E-05 34.1 6.3 26 109-134 12-40 (203)
187 4ag1_C Fynomer; hydrolase-de n 84.6 0.34 1.1E-05 34.8 1.4 25 26-51 15-47 (84)
188 1neg_A Spectrin alpha chain, b 84.6 0.3 1E-05 35.3 1.1 25 24-49 24-56 (83)
189 2ekh_A SH3 and PX domain-conta 84.6 0.37 1.3E-05 34.1 1.6 25 25-50 16-48 (80)
190 2epd_A RHO GTPase-activating p 84.4 0.23 7.7E-06 34.8 0.4 17 34-50 26-50 (76)
191 2dm1_A Protein VAV-2; RHO fami 84.4 0.32 1.1E-05 33.7 1.2 25 25-50 15-49 (73)
192 2da9_A SH3-domain kinase bindi 84.4 0.4 1.4E-05 32.8 1.6 25 25-50 15-49 (70)
193 1uff_A Intersectin 2; beta bar 84.2 0.32 1.1E-05 35.4 1.1 26 24-50 12-47 (93)
194 2ct4_A CDC42-interacting prote 84.2 0.44 1.5E-05 32.6 1.8 27 24-51 14-49 (70)
195 2jxb_A T-cell surface glycopro 83.9 0.44 1.5E-05 34.2 1.8 26 25-51 39-71 (86)
196 1spk_A RSGI RUH-010, riken cDN 83.7 0.55 1.9E-05 32.2 2.1 18 34-51 24-50 (72)
197 2bdt_A BH3686; alpha-beta prot 83.6 2.3 7.7E-05 33.5 6.1 19 113-131 3-24 (189)
198 1nn5_A Similar to deoxythymidy 83.6 1.7 5.9E-05 34.5 5.4 25 110-134 7-34 (215)
199 4eun_A Thermoresistant glucoki 83.5 1.7 5.8E-05 34.9 5.4 24 110-133 27-53 (200)
200 2jt4_A Cytoskeleton assembly c 83.3 0.43 1.5E-05 32.5 1.4 26 25-51 14-48 (71)
201 2k9g_A SH3 domain-containing k 83.1 0.38 1.3E-05 33.1 1.1 17 34-50 25-51 (73)
202 1x43_A Endophilin B1, SH3 doma 82.8 0.46 1.6E-05 33.5 1.5 25 25-50 25-59 (81)
203 1wx6_A Cytoplasmic protein NCK 82.8 0.56 1.9E-05 33.7 2.0 25 25-50 25-59 (91)
204 1uhc_A KIAA1010 protein; beta 82.8 0.46 1.6E-05 33.4 1.5 28 22-50 18-57 (79)
205 1nks_A Adenylate kinase; therm 82.7 2.2 7.5E-05 33.0 5.6 23 113-135 2-27 (194)
206 2dlp_A KIAA1783 protein; SH3 d 82.6 0.46 1.6E-05 33.9 1.4 25 25-50 16-50 (85)
207 1ly1_A Polynucleotide kinase; 82.3 3.3 0.00011 31.7 6.4 19 113-131 3-24 (181)
208 2vli_A Antibiotic resistance p 81.8 8.6 0.0003 29.5 8.8 23 112-134 5-30 (183)
209 2d8h_A SH3YL1 protein; SH3 dom 81.6 0.4 1.4E-05 33.7 0.7 17 34-50 33-59 (80)
210 2bwj_A Adenylate kinase 5; pho 81.5 1.6 5.5E-05 34.2 4.4 22 112-133 12-36 (199)
211 1u3o_A Huntingtin-associated p 81.4 0.81 2.8E-05 33.7 2.3 32 20-52 20-61 (82)
212 2m0y_A Dedicator of cytokinesi 81.3 0.38 1.3E-05 33.1 0.5 26 25-51 19-51 (74)
213 3lw7_A Adenylate kinase relate 81.2 4.1 0.00014 30.5 6.5 19 114-133 3-24 (179)
214 1x6b_A RHO guanine exchange fa 80.5 0.72 2.5E-05 32.4 1.8 28 23-51 23-57 (79)
215 2enm_A Sorting nexin-9; SH3-li 80.4 0.8 2.7E-05 31.8 2.0 18 34-51 26-52 (77)
216 2z0h_A DTMP kinase, thymidylat 80.3 0.82 2.8E-05 35.9 2.3 20 114-133 2-24 (197)
217 1i1j_A Melanoma derived growth 80.1 0.73 2.5E-05 35.0 1.8 30 22-52 27-67 (108)
218 1gri_A Growth factor bound pro 79.8 0.72 2.5E-05 37.9 1.9 28 22-50 163-198 (217)
219 3v9p_A DTMP kinase, thymidylat 79.5 0.61 2.1E-05 39.6 1.3 79 111-198 24-118 (227)
220 2dvj_A V-CRK sarcoma virus CT1 79.4 0.91 3.1E-05 38.3 2.4 28 22-50 141-176 (230)
221 2kbt_A Chimera of proto-oncoge 79.3 0.66 2.2E-05 36.8 1.4 27 23-50 11-46 (142)
222 2rf0_A Mitogen-activated prote 78.2 0.82 2.8E-05 33.3 1.5 29 22-51 34-75 (89)
223 2gks_A Bifunctional SAT/APS ki 76.7 2.9 9.9E-05 39.9 5.3 99 112-225 372-482 (546)
224 3jv3_A Intersectin-1; SH3 doma 76.3 0.8 2.7E-05 38.9 1.1 24 26-50 11-42 (283)
225 1ltq_A Polynucleotide kinase; 75.8 5.6 0.00019 33.6 6.4 21 113-133 3-26 (301)
226 1ri9_A FYN-binding protein; SH 74.6 0.94 3.2E-05 34.7 1.0 20 32-51 55-82 (102)
227 1ng2_A Neutrophil cytosolic fa 74.1 1.7 6E-05 35.5 2.6 28 22-50 16-51 (193)
228 2plr_A DTMP kinase, probable t 73.8 6.2 0.00021 30.9 5.8 24 112-135 4-30 (213)
229 1knq_A Gluconate kinase; ALFA/ 73.6 28 0.00095 26.5 10.0 22 112-133 8-32 (175)
230 3d3q_A TRNA delta(2)-isopenten 73.6 0.9 3.1E-05 41.3 0.8 22 113-134 8-32 (340)
231 3vaa_A Shikimate kinase, SK; s 73.4 2.9 9.9E-05 33.4 3.8 23 111-133 24-49 (199)
232 1wxu_A Peroxisomal biogenesis 73.2 1.5 5.3E-05 31.6 1.9 18 34-51 33-62 (93)
233 3a98_A DOCK2, dedicator of cyt 72.8 1.4 4.7E-05 36.2 1.7 29 22-51 22-57 (184)
234 1bb9_A Amphiphysin 2; transfer 71.3 1.6 5.5E-05 33.3 1.7 27 24-51 51-90 (115)
235 2cdn_A Adenylate kinase; phosp 71.1 4.2 0.00014 32.3 4.2 23 111-133 19-44 (201)
236 2pz1_A RHO guanine nucleotide 70.3 1.4 4.6E-05 40.6 1.2 28 23-51 36-71 (466)
237 1fmk_A C-SRC, P60-SRC, tyrosin 69.4 1.6 5.5E-05 39.6 1.5 29 22-51 7-43 (452)
238 2h8h_A Proto-oncogene tyrosine 69.3 1.6 5.5E-05 40.7 1.5 29 22-51 90-126 (535)
239 3qwy_A Cell death abnormality 69.1 1.8 6.1E-05 38.0 1.7 27 23-50 153-187 (308)
240 2e5k_A Suppressor of T-cell re 68.5 1.9 6.5E-05 31.1 1.5 27 23-50 22-60 (94)
241 1opk_A P150, C-ABL, proto-onco 68.4 1.7 5.9E-05 40.0 1.5 32 19-51 45-85 (495)
242 1ng2_A Neutrophil cytosolic fa 65.8 2 6.7E-05 35.2 1.2 26 24-50 88-121 (193)
243 4gox_A Polyketide synthase; ol 65.6 5.2 0.00018 33.9 3.9 30 111-140 22-54 (313)
244 1gri_A Growth factor bound pro 65.0 2.4 8.1E-05 34.7 1.6 17 34-50 16-41 (217)
245 2gtj_A FYN-binding protein; SH 64.2 1.6 5.6E-05 33.0 0.4 19 33-51 42-70 (96)
246 1v1c_A Obscurin; muscle, sarco 63.9 6.6 0.00022 28.1 3.5 42 22-63 10-60 (71)
247 3o5z_A Phosphatidylinositol 3- 63.7 2.9 0.0001 30.1 1.7 18 25-43 19-36 (90)
248 1k9a_A Carboxyl-terminal SRC k 63.2 2.5 8.6E-05 38.3 1.5 28 23-51 17-53 (450)
249 1qcf_A Haematopoetic cell kina 63.1 2.6 9E-05 38.1 1.6 28 22-50 13-47 (454)
250 2xb4_A Adenylate kinase; ATP-b 62.7 15 0.0005 29.9 6.0 20 114-133 2-24 (223)
251 2eyz_A V-CRK sarcoma virus CT1 61.5 3.5 0.00012 36.1 2.0 27 23-50 140-174 (304)
252 1mv3_A MYC box dependent inter 61.0 3.1 0.00011 35.4 1.6 28 23-51 148-188 (213)
253 3i5r_A Phosphatidylinositol 3- 59.8 4 0.00014 28.6 1.7 11 33-43 20-30 (83)
254 2dyb_A Neutrophil cytosol fact 59.7 2.7 9.4E-05 37.4 1.1 28 22-50 179-214 (341)
255 3umf_A Adenylate kinase; rossm 58.8 28 0.00097 29.0 7.2 24 110-133 27-53 (217)
256 4edh_A DTMP kinase, thymidylat 54.5 27 0.00094 28.7 6.4 23 112-134 6-31 (213)
257 3ehr_A Osteoclast-stimulating 54.3 5.8 0.0002 31.4 2.1 33 19-52 16-56 (222)
258 2eyz_A V-CRK sarcoma virus CT1 54.0 5 0.00017 35.1 1.8 32 19-50 239-279 (304)
259 2lqn_A CRK-like protein; SH2, 57.4 3 0.0001 36.5 0.0 29 22-51 130-166 (303)
260 3syl_A Protein CBBX; photosynt 48.5 74 0.0025 26.4 8.2 22 111-132 66-90 (309)
261 3lv8_A DTMP kinase, thymidylat 48.3 16 0.00054 30.9 3.9 24 111-134 26-52 (236)
262 4gbm_A CURM sulfotransferase; 47.5 11 0.00038 32.0 2.9 28 112-139 32-61 (323)
263 1m7g_A Adenylylsulfate kinase; 47.2 70 0.0024 25.3 7.6 24 110-133 23-49 (211)
264 2zej_A Dardarin, leucine-rich 43.6 11 0.00037 29.1 2.0 19 114-132 4-25 (184)
265 3pqc_A Probable GTP-binding pr 42.7 27 0.00091 26.4 4.2 23 111-133 22-47 (195)
266 2lqn_A CRK-like protein; SH2, 48.3 5.3 0.00018 34.9 0.0 18 33-50 254-279 (303)
267 1svi_A GTP-binding protein YSX 41.7 19 0.00065 27.5 3.2 29 104-132 15-46 (195)
268 1y63_A LMAJ004144AAA protein; 41.6 24 0.00081 27.6 3.8 25 108-132 6-33 (184)
269 3haj_A Human pacsin2 F-BAR; pa 41.0 5.7 0.00019 37.1 0.0 18 34-51 444-470 (486)
270 2cjw_A GTP-binding protein GEM 40.6 22 0.00075 27.8 3.5 19 114-132 8-29 (192)
271 1zp6_A Hypothetical protein AT 40.0 20 0.00067 27.7 3.0 23 110-132 7-32 (191)
272 3tmk_A Thymidylate kinase; pho 38.2 39 0.0013 28.0 4.8 25 111-135 4-31 (216)
273 2de0_X Alpha-(1,6)-fucosyltran 38.0 12 0.0004 35.9 1.6 30 21-51 446-483 (526)
274 3pvs_A Replication-associated 37.6 40 0.0014 31.0 5.2 105 111-229 49-172 (447)
275 1kht_A Adenylate kinase; phosp 35.8 28 0.00095 26.6 3.3 22 113-134 4-28 (192)
276 1uj2_A Uridine-cytidine kinase 35.3 29 0.001 28.6 3.6 32 103-134 13-47 (252)
277 3iij_A Coilin-interacting nucl 34.9 24 0.00084 27.1 2.8 23 111-133 10-35 (180)
278 4dhe_A Probable GTP-binding pr 34.6 40 0.0014 26.4 4.1 26 108-133 25-53 (223)
279 1qf9_A UMP/CMP kinase, protein 34.6 32 0.0011 26.1 3.5 22 112-133 6-30 (194)
280 3pvl_A Myosin VIIA isoform 1; 34.6 11 0.00036 37.0 0.8 17 34-50 592-621 (655)
281 2dyk_A GTP-binding protein; GT 34.2 28 0.00095 25.4 3.0 20 114-133 3-25 (161)
282 2g3y_A GTP-binding protein GEM 34.1 30 0.001 28.1 3.3 19 114-132 39-60 (211)
283 2zq5_A Putative uncharacterize 34.0 25 0.00085 31.3 3.1 25 112-136 91-117 (384)
284 1zak_A Adenylate kinase; ATP:A 32.6 26 0.00089 28.0 2.7 23 112-134 5-30 (222)
285 4dkx_A RAS-related protein RAB 32.2 31 0.001 28.3 3.1 18 115-132 16-36 (216)
286 1jbk_A CLPB protein; beta barr 31.5 37 0.0013 25.2 3.3 24 110-133 41-67 (195)
287 1ug1_A KIAA1010 protein; struc 31.4 22 0.00075 26.6 1.9 23 20-43 20-42 (92)
288 1kag_A SKI, shikimate kinase I 31.2 39 0.0013 25.5 3.4 23 112-134 4-29 (173)
289 2il1_A RAB12; G-protein, GDP, 30.8 25 0.00086 27.2 2.3 18 115-132 29-49 (192)
290 2z6v_A Putative uncharacterize 30.0 22 0.00077 32.1 2.1 27 111-137 105-133 (414)
291 1gtv_A TMK, thymidylate kinase 29.9 24 0.00082 27.7 2.0 21 114-134 2-25 (214)
292 3uie_A Adenylyl-sulfate kinase 29.5 42 0.0014 26.4 3.4 24 110-133 23-49 (200)
293 1m8p_A Sulfate adenylyltransfe 29.3 38 0.0013 32.3 3.7 21 112-132 396-419 (573)
294 1np6_A Molybdopterin-guanine d 29.3 38 0.0013 27.0 3.2 22 113-134 7-31 (174)
295 1kao_A RAP2A; GTP-binding prot 29.0 37 0.0013 24.6 2.9 19 114-132 5-26 (167)
296 3clv_A RAB5 protein, putative; 28.7 49 0.0017 24.8 3.6 20 113-132 8-30 (208)
297 2wji_A Ferrous iron transport 28.6 36 0.0012 25.5 2.8 20 113-132 4-26 (165)
298 2iwr_A Centaurin gamma 1; ANK 28.5 52 0.0018 24.5 3.7 19 114-132 9-30 (178)
299 1wms_A RAB-9, RAB9, RAS-relate 28.1 43 0.0015 24.8 3.1 20 114-133 9-31 (177)
300 2qi2_A Pelota, cell division p 28.1 1.4E+02 0.0048 26.6 7.0 26 113-138 190-217 (347)
301 2nzj_A GTP-binding protein REM 27.7 38 0.0013 25.0 2.7 19 114-132 6-27 (175)
302 1ek0_A Protein (GTP-binding pr 27.6 41 0.0014 24.6 2.9 18 115-132 6-26 (170)
303 2wwf_A Thymidilate kinase, put 27.5 44 0.0015 26.0 3.2 22 112-133 10-34 (212)
304 1z2a_A RAS-related protein RAB 27.3 41 0.0014 24.5 2.9 19 114-132 7-28 (168)
305 3t5g_A GTP-binding protein RHE 27.3 33 0.0011 25.8 2.3 21 112-132 6-29 (181)
306 2p65_A Hypothetical protein PF 27.1 47 0.0016 24.7 3.2 24 110-133 41-67 (187)
307 2qu8_A Putative nucleolar GTP- 27.1 45 0.0015 26.6 3.2 31 102-132 17-52 (228)
308 3bc1_A RAS-related protein RAB 26.8 42 0.0014 25.1 2.9 20 113-132 12-34 (195)
309 1ky3_A GTP-binding protein YPT 26.6 42 0.0014 24.8 2.9 20 113-132 9-31 (182)
310 3shw_A Tight junction protein 26.6 58 0.002 30.6 4.3 39 153-191 340-379 (468)
311 1tev_A UMP-CMP kinase; ploop, 26.4 47 0.0016 25.2 3.2 22 112-133 3-27 (196)
312 2wjg_A FEOB, ferrous iron tran 26.3 41 0.0014 25.4 2.8 20 113-132 8-30 (188)
313 3qwy_A Cell death abnormality 26.2 14 0.00048 32.1 0.0 18 33-50 264-289 (308)
314 1r2q_A RAS-related protein RAB 26.2 45 0.0015 24.3 2.9 19 114-132 8-29 (170)
315 1z0j_A RAB-22, RAS-related pro 26.1 44 0.0015 24.4 2.9 20 114-133 8-30 (170)
316 3q72_A GTP-binding protein RAD 26.1 26 0.00088 25.8 1.5 18 115-132 5-25 (166)
317 1c1y_A RAS-related protein RAP 25.7 46 0.0016 24.2 2.9 19 114-132 5-26 (167)
318 3ap1_A Protein-tyrosine sulfot 25.6 53 0.0018 28.6 3.7 27 112-138 45-74 (337)
319 3bos_A Putative DNA replicatio 25.5 54 0.0018 25.6 3.4 22 111-132 51-75 (242)
320 1z08_A RAS-related protein RAB 25.5 46 0.0016 24.4 2.9 19 114-132 8-29 (170)
321 1u8z_A RAS-related protein RAL 25.4 47 0.0016 24.1 2.9 19 114-132 6-27 (168)
322 2erx_A GTP-binding protein DI- 25.4 45 0.0015 24.4 2.7 19 114-132 5-26 (172)
323 2qby_B CDC6 homolog 3, cell di 25.3 52 0.0018 28.1 3.5 22 111-132 44-68 (384)
324 2hxs_A RAB-26, RAS-related pro 25.3 49 0.0017 24.5 3.0 19 114-132 8-29 (178)
325 1g16_A RAS-related protein SEC 25.3 42 0.0014 24.5 2.6 19 114-132 5-26 (170)
326 1r8s_A ADP-ribosylation factor 24.9 51 0.0017 24.1 3.0 19 115-133 3-24 (164)
327 2f9l_A RAB11B, member RAS onco 24.8 47 0.0016 25.7 2.9 20 113-132 6-28 (199)
328 2oil_A CATX-8, RAS-related pro 24.7 48 0.0016 25.2 2.9 20 113-132 26-48 (193)
329 1oix_A RAS-related protein RAB 24.6 44 0.0015 25.9 2.7 21 113-133 30-53 (191)
330 4dsu_A GTPase KRAS, isoform 2B 24.6 48 0.0017 24.8 2.9 18 115-132 7-27 (189)
331 2y8e_A RAB-protein 6, GH09086P 24.6 50 0.0017 24.4 2.9 19 114-132 16-37 (179)
332 1m2o_B GTP-binding protein SAR 24.5 57 0.0019 25.1 3.3 20 114-133 25-47 (190)
333 3q85_A GTP-binding protein REM 24.5 48 0.0016 24.3 2.8 18 115-132 5-25 (169)
334 3sr0_A Adenylate kinase; phosp 24.4 39 0.0013 27.6 2.4 19 115-133 3-24 (206)
335 2fh5_B SR-beta, signal recogni 24.2 66 0.0023 24.9 3.7 20 113-132 8-30 (214)
336 3c8u_A Fructokinase; YP_612366 24.2 56 0.0019 25.9 3.3 25 110-134 20-47 (208)
337 1upt_A ARL1, ADP-ribosylation 24.1 51 0.0018 24.2 2.9 20 113-132 8-30 (171)
338 1zd8_A GTP:AMP phosphotransfer 24.0 55 0.0019 26.2 3.2 23 112-134 7-32 (227)
339 2a9k_A RAS-related protein RAL 24.0 51 0.0018 24.5 2.9 20 113-132 19-41 (187)
340 3t1o_A Gliding protein MGLA; G 23.9 53 0.0018 24.7 3.0 25 113-137 15-42 (198)
341 1ksh_A ARF-like protein 2; sma 23.9 56 0.0019 24.6 3.1 22 112-133 18-42 (186)
342 2g6b_A RAS-related protein RAB 23.8 52 0.0018 24.4 2.9 20 114-133 12-34 (180)
343 3kfv_A Tight junction protein 23.8 70 0.0024 28.4 4.1 39 153-191 257-296 (308)
344 3tkl_A RAS-related protein RAB 23.7 51 0.0018 24.9 2.9 19 114-132 18-39 (196)
345 3ihw_A Centg3; RAS, centaurin, 23.6 51 0.0017 25.4 2.9 19 114-132 22-43 (184)
346 2jaq_A Deoxyguanosine kinase; 23.5 44 0.0015 25.7 2.4 22 114-135 2-26 (205)
347 1z0f_A RAB14, member RAS oncog 23.5 53 0.0018 24.2 2.9 20 113-132 16-38 (179)
348 2ce2_X GTPase HRAS; signaling 23.3 49 0.0017 23.8 2.6 18 115-132 6-26 (166)
349 2gj8_A MNME, tRNA modification 23.3 67 0.0023 24.3 3.5 20 114-133 6-28 (172)
350 2w58_A DNAI, primosome compone 23.3 61 0.0021 25.2 3.3 21 113-133 55-78 (202)
351 2fn4_A P23, RAS-related protei 22.9 55 0.0019 24.1 2.9 20 113-132 10-32 (181)
352 1via_A Shikimate kinase; struc 22.9 48 0.0016 25.3 2.6 20 114-133 6-28 (175)
353 3vqt_A RF-3, peptide chain rel 22.9 1.5E+02 0.0052 27.9 6.5 106 109-221 28-161 (548)
354 2qmh_A HPR kinase/phosphorylas 22.8 58 0.002 27.4 3.2 24 111-134 33-59 (205)
355 2efe_B Small GTP-binding prote 22.7 56 0.0019 24.3 2.9 19 114-132 14-35 (181)
356 3asz_A Uridine kinase; cytidin 22.7 55 0.0019 25.6 2.9 24 111-134 5-31 (211)
357 2yc2_C IFT27, small RAB-relate 22.7 23 0.00077 27.2 0.6 19 114-132 22-43 (208)
358 3tsz_A Tight junction protein 22.6 46 0.0016 30.1 2.7 40 152-191 347-387 (391)
359 1x3s_A RAS-related protein RAB 22.6 56 0.0019 24.6 2.9 19 114-132 17-38 (195)
360 3tw8_B RAS-related protein RAB 22.5 44 0.0015 24.7 2.2 19 114-132 11-32 (181)
361 1z06_A RAS-related protein RAB 22.4 56 0.0019 24.8 2.9 20 113-132 21-43 (189)
362 2lkc_A Translation initiation 22.4 83 0.0028 23.2 3.8 21 112-132 8-31 (178)
363 2gf9_A RAS-related protein RAB 22.3 57 0.0019 24.8 2.9 20 113-132 23-45 (189)
364 2ged_A SR-beta, signal recogni 22.3 56 0.0019 24.7 2.9 22 112-133 48-72 (193)
365 2qz4_A Paraplegin; AAA+, SPG7, 22.2 68 0.0023 25.7 3.5 26 110-135 37-65 (262)
366 3dz8_A RAS-related protein RAB 22.2 53 0.0018 25.1 2.7 20 114-133 25-47 (191)
367 2bov_A RAla, RAS-related prote 22.1 57 0.002 24.9 2.9 20 113-132 15-37 (206)
368 1rz3_A Hypothetical protein rb 22.1 41 0.0014 26.6 2.1 25 109-133 19-46 (201)
369 3c5c_A RAS-like protein 12; GD 21.9 58 0.002 25.0 2.9 20 113-132 22-44 (187)
370 1vg8_A RAS-related protein RAB 21.9 58 0.002 24.9 2.9 20 113-132 9-31 (207)
371 2bme_A RAB4A, RAS-related prot 21.7 53 0.0018 24.6 2.6 19 114-132 12-33 (186)
372 2a5j_A RAS-related protein RAB 21.7 60 0.002 24.8 2.9 19 114-132 23-44 (191)
373 3ptw_A Malonyl COA-acyl carrie 21.7 1.5E+02 0.0051 26.0 5.8 83 110-204 161-278 (336)
374 1zbd_A Rabphilin-3A; G protein 21.7 57 0.0019 25.0 2.8 19 114-132 10-31 (203)
375 3kkq_A RAS-related protein M-R 21.6 58 0.002 24.4 2.8 19 114-132 20-41 (183)
376 3lxx_A GTPase IMAP family memb 21.6 57 0.002 26.3 2.9 24 111-134 28-54 (239)
377 2y3a_B Phosphatidylinositol 3- 21.5 4.9 0.00017 35.9 -4.0 19 34-52 119-148 (302)
378 1mh1_A RAC1; GTP-binding, GTPa 21.5 61 0.0021 24.1 2.9 19 114-132 7-28 (186)
379 1nrj_B SR-beta, signal recogni 21.4 59 0.002 25.3 2.9 21 113-133 13-36 (218)
380 1m7b_A RND3/RHOE small GTP-bin 21.4 54 0.0019 24.8 2.6 19 114-132 9-30 (184)
381 3cm0_A Adenylate kinase; ATP-b 21.4 62 0.0021 24.6 2.9 22 112-133 4-28 (186)
382 1uf9_A TT1252 protein; P-loop, 21.3 65 0.0022 24.8 3.1 22 111-132 7-31 (203)
383 1zd9_A ADP-ribosylation factor 21.3 61 0.0021 24.7 2.9 19 114-132 24-45 (188)
384 1nst_A NST1, heparan sulfate N 21.1 57 0.0019 28.0 2.9 33 112-144 46-82 (325)
385 4bas_A ADP-ribosylation factor 21.1 49 0.0017 25.1 2.3 22 111-132 16-40 (199)
386 2cxx_A Probable GTP-binding pr 21.0 49 0.0017 24.8 2.3 18 115-132 4-24 (190)
387 2qt1_A Nicotinamide riboside k 21.0 72 0.0025 24.9 3.3 23 112-134 21-46 (207)
388 2p5s_A RAS and EF-hand domain 20.9 63 0.0022 24.9 2.9 22 111-132 27-51 (199)
389 1e6c_A Shikimate kinase; phosp 20.8 70 0.0024 23.9 3.1 21 113-133 3-26 (173)
390 1njg_A DNA polymerase III subu 20.5 76 0.0026 24.2 3.3 22 112-133 45-69 (250)
391 3tvt_A Disks large 1 tumor sup 20.4 27 0.00092 30.6 0.6 39 153-191 245-283 (292)
392 3llu_A RAS-related GTP-binding 20.3 70 0.0024 24.6 3.1 24 111-134 19-45 (196)
393 2atv_A RERG, RAS-like estrogen 20.2 75 0.0026 24.3 3.2 21 112-132 28-51 (196)
394 3con_A GTPase NRAS; structural 20.2 67 0.0023 24.2 2.9 19 114-132 23-44 (190)
395 3n70_A Transport activator; si 20.1 96 0.0033 23.0 3.7 24 110-133 22-48 (145)
No 1
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=7.2e-51 Score=366.88 Aligned_cols=198 Identities=45% Similarity=0.767 Sum_probs=155.8
Q ss_pred EEEeeeccccccCCCCCCCCCCCCCccCCCCccc--------cccccccccCCCCccceeeecccccccccccCCCCCCC
Q psy10229 10 TFMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKMSRNNTAKITFRGKCKTRFFDRKNSYLPMN 81 (231)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~~~~~~~~~~l~~~~r~~~~~rk~~~~~~~ 81 (231)
+|.++|||||-...|+++||. ||+|++|||| +||||+++...+....+||+.... ...++.....
T Consensus 5 s~yvRa~fdY~~~~D~~~P~~---gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~-~~e~~~~~~~--- 77 (292)
T 3tvt_A 5 SLYVRALFDYDPNRDDGLPSR---GLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKR-RWERKMRARD--- 77 (292)
T ss_dssp CCEEEECSCBCC------------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHH-HHHHHHHC-----
T ss_pred eEEEEEeccCCCCCCCCCCCC---cCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChH-HHHHHHHHhh---
Confidence 688999999999999999997 7899999999 699999987655556789975432 1222211100
Q ss_pred CCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCChHHHHHHHHhhCCCCcccccCCC----------CCcchhH
Q psy10229 82 PGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLKDRINDDLISEFPEQFGSCVPPL----------GKMYDRS 151 (231)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV 151 (231)
.....++++++||+|++++++++|||||+||+|++|+++|++++|++|+++|||| |+|||||
T Consensus 78 --------~~~~~~~~~~~YE~V~~~~~~~~RpvVl~Gp~K~tl~~~Ll~~~p~~f~~sVs~TTR~pR~gE~dG~dY~Fv 149 (292)
T 3tvt_A 78 --------RSVKSEENVLSYEAVQRLSINYTRPVIILGPLKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFV 149 (292)
T ss_dssp ----------------CCCEEEEEEEECSSCCCEEEESTTHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBTTTBEEC
T ss_pred --------ccccccccccchheEEeccCCCCCeEEEeCCCHHHHHHHHHHhChhhccccccCCccCCcCCccCCcccccc
Confidence 0123456789999999999999999999999999999999999999999999999 9999998
Q ss_pred ---HHHHHHHhc-cCceeEEeccCCccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCC
Q psy10229 152 ---MKMEQEFGE-FFTAVVQGDMPEDIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKS 223 (231)
Q Consensus 152 ---e~fe~~i~~-~Fd~iE~g~~~g~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS 223 (231)
++|+++|++ .| |||++++||+| ++|++++++ |++||||||+||+++|+..+++|++|||+|||
T Consensus 150 ~s~e~fe~~i~~~~f--lE~a~~~gn~YGT~~~~V~~~~~~-------gk~viLdid~qg~~~lk~~~~~pi~IFI~PpS 220 (292)
T 3tvt_A 150 SSREQMERDIQNHLF--IEAGQYNDNLYGTSVASVREVAEK-------GKHCILDVSGNAIKRLQVAQLYPVAVFIKPKS 220 (292)
T ss_dssp SCHHHHHHHHHTTCE--EEEEEETTEEEEEEHHHHHHHHHH-------TCEEEECCCTHHHHHHHHTTCCCEEEEECCSC
T ss_pred CCHHHHHHHHhcCce--EEEEEEccceeEEehHHHHHHHHc-------CCcEEEeccchhhhhcccccccceEEEEECCC
Confidence 789999999 99 99999999999 899999999 99999999999999999999999999999999
Q ss_pred HHHHhhcC
Q psy10229 224 VESIICRR 231 (231)
Q Consensus 224 ~e~L~~~r 231 (231)
+++|++++
T Consensus 221 ~e~L~~r~ 228 (292)
T 3tvt_A 221 VDSVMEMN 228 (292)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99998763
No 2
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=100.00 E-value=1.9e-41 Score=304.96 Aligned_cols=202 Identities=43% Similarity=0.699 Sum_probs=165.7
Q ss_pred EEeeeccccccCCCCCCCCCCCCCccCCCCccc--------cccccccccCCCCccceeeeccc----ccccccccCCCC
Q psy10229 11 FMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKMSRNNTAKITFRGKC----KTRFFDRKNSYL 78 (231)
Q Consensus 11 ~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~~~~~~~~~~l~~~~----r~~~~~rk~~~~ 78 (231)
|.+++.+||-...++.+| +.+|+|++|||| +||||++.+..+.....|+.... ++...+.|..
T Consensus 2 ~~vrAlydy~~~~~~~~p---~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~~~~~-- 76 (295)
T 1kjw_A 2 FYIRALFDYDKTKDCGFL---SQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAK-- 76 (295)
T ss_dssp EEEEESSCBCHHHHHCCC---SSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTSCC----
T ss_pred EEEEEeeccCCCCCCCCC---CcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHHHHHhhhccc--
Confidence 668888888777777777 468899999999 59999988643322356774321 1111111110
Q ss_pred CCCCCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCChHHHHHHHHhhCCCCcccccCCC----------CCcc
Q psy10229 79 PMNPGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLKDRINDDLISEFPEQFGSCVPPL----------GKMY 148 (231)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk~~l~~~Ll~~~P~~F~~~vp~T----------G~dY 148 (231)
+. .. .+++.++.+.+++||+|+++++...|||||+||+|++|+++|++.+|+.|.++|||| |++|
T Consensus 77 ---~~-~~-~~~~~~~~~~~~~Ye~V~~~~~~~~r~ivl~GPgK~tl~~~L~~~~~~~~~~~vs~TTR~~R~gE~~G~dY 151 (295)
T 1kjw_A 77 ---DW-GS-SSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDY 151 (295)
T ss_dssp ----C-CS-CCSSCCCCCCCCCEEEEEEEECCSCCCEEEESTTHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBTTTB
T ss_pred ---cc-Cc-ccccccccCCCCCcceeeeecCCCCCEEEEECCCHHHHHHHHHhhCccceeeeeeecccCCCCccccCcee
Confidence 11 11 122356678899999999999999999999999999999999999999999999998 9999
Q ss_pred hhH---HHHHHHHhc-cCceeEEeccCCccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEc
Q psy10229 149 DRS---MKMEQEFGE-FFTAVVQGDMPEDIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIK 220 (231)
Q Consensus 149 ~FV---e~fe~~i~~-~Fd~iE~g~~~g~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ 220 (231)
||| ++|+++|++ .| |||++++||+| ++|++++++ |++|||||+++|+++|+..+++|++|||.
T Consensus 152 ~Fv~s~eef~~~i~~g~f--lE~~~~~g~~YGt~~~~V~~~~~~-------G~~vildid~~g~~~l~~~~~~pi~IfI~ 222 (295)
T 1kjw_A 152 HFVSSREKMEKDIQAHKF--IEAGQYNSHLYGTSVQSVREVAEQ-------GKHCILDVSANAVRRLQAAHLHPIAIFIR 222 (295)
T ss_dssp EECSCHHHHHHHHHTTCE--EEEEEETTEEEEEEHHHHHHHHHT-------TCEEEECCCTTHHHHHHHTTCCCEEEEEC
T ss_pred EecCCHHHHHHHHHCCCc--EEEEEEcCcEeeeeHHHHHHHHhc-------CCeEEEEeCHHHHHHHHhcccCCeEEEEE
Confidence 999 899999999 99 99999999999 789999999 99999999999999999999999999999
Q ss_pred CCCHHHHhhcC
Q psy10229 221 PKSVESIICRR 231 (231)
Q Consensus 221 ppS~e~L~~~r 231 (231)
|||+++|++++
T Consensus 223 pps~~~L~~L~ 233 (295)
T 1kjw_A 223 PRSLENVLEIN 233 (295)
T ss_dssp CSSHHHHHHHC
T ss_pred CCCHHHHHHHH
Confidence 99999998753
No 3
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-39 Score=319.63 Aligned_cols=202 Identities=43% Similarity=0.688 Sum_probs=167.2
Q ss_pred EEEeeeccccccCCCCCCCCCCCCCccCCCCccc--------cccccccccCCCCccceeeeccc----ccccccccCCC
Q psy10229 10 TFMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKMSRNNTAKITFRGKC----KTRFFDRKNSY 77 (231)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~~~~~~~~~~l~~~~----r~~~~~rk~~~ 77 (231)
.|.++++|+|-...|+..| +.||+|++|||| +||||++.+..+.....|+.... ++...+.+.
T Consensus 427 ~~~vrAl~dy~~~~d~~~p---~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~~~-- 501 (721)
T 2xkx_A 427 GFYIRALFDYDKTKDCGFL---SQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKA-- 501 (721)
T ss_pred ceeEEEeeccCcCCCCCCc---cccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHHHHhhhccc--
Confidence 4677888888777777777 568999999998 59999998654433456774321 110011110
Q ss_pred CCCCCCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCChHHHHHHHHhhCCCCcccccCCC----------CCc
Q psy10229 78 LPMNPGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLKDRINDDLISEFPEQFGSCVPPL----------GKM 147 (231)
Q Consensus 78 ~~~~~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk~~l~~~Ll~~~P~~F~~~vp~T----------G~d 147 (231)
.++.. .++..++.+.+++||+|+++++.+.|||||+||+|++|+++|++.+|+.|.++|||| |+|
T Consensus 502 ---~~~~~--~~~~~~~~~~~~~Ye~V~~~~~~~~r~vvl~GP~K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~d 576 (721)
T 2xkx_A 502 ---KDWGS--SSGSQGREDSVLSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRD 576 (721)
T ss_pred ---ccccC--cchhhcccccCCCceeeecccCCCCCEEEEECCCHHHHHHHHHHhCccceeecccccccCCCCCccCCce
Confidence 01111 122356788899999999999999999999999999999999999999999999999 999
Q ss_pred chhH---HHHHHHHhc-cCceeEEeccCCccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEE
Q psy10229 148 YDRS---MKMEQEFGE-FFTAVVQGDMPEDIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFI 219 (231)
Q Consensus 148 Y~FV---e~fe~~i~~-~Fd~iE~g~~~g~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI 219 (231)
|||| ++|+++|++ +| +||++++||+| ++|++++++ |++|||||+++|+++|+..+++|++|||
T Consensus 577 Y~Fv~s~~~f~~~i~~~~f--lE~~~~~g~~YGt~~~~v~~~~~~-------g~~~ildi~~~~~~~l~~~~~~p~~ifi 647 (721)
T 2xkx_A 577 YHFVSSREKMEKDIRAHKF--IEAGQYNSHLYGTSVQSVREVAEQ-------GKHCILDVSANAVRRLQAAHLHPIAIFI 647 (721)
T ss_pred eEEecCHHHHHHHHhcCCc--eEEEEECCccceeeHHHHHHHHHC-------CCcEEEeCCHHHHHHHHhcccCCEEEEE
Confidence 9998 889999999 99 99999999999 889999999 9999999999999999999999999999
Q ss_pred cCCCHHHHhhc
Q psy10229 220 KPKSVESIICR 230 (231)
Q Consensus 220 ~ppS~e~L~~~ 230 (231)
+|||+++|+++
T Consensus 648 ~pps~~~L~~l 658 (721)
T 2xkx_A 648 RPRSLENVLEI 658 (721)
T ss_pred eCCcHHHHHHH
Confidence 99999999874
No 4
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=274.21 Aligned_cols=182 Identities=19% Similarity=0.258 Sum_probs=125.2
Q ss_pred EEeeeccccccCCCCCCCCCCCCCccCCCCccc--------c---------ccccccccCCCCccceeee----------
Q psy10229 11 FMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL--------E---------WHGRKKKMSRNNTAKITFR---------- 63 (231)
Q Consensus 11 ~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil--------~---------Wwqa~~~~~~~~~~~~~l~---------- 63 (231)
|.++++|+|-. .. +-+|+|++|||| + ||||++++..+.....|++
T Consensus 5 fyVRalfdy~~-------~~-~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq~~ 76 (308)
T 3kfv_A 5 FYIRTHFELEP-------SP-PSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQLA 76 (308)
T ss_dssp EEEEECSCBCC-------CS-SSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHHHH
T ss_pred EEEEEecCcCC-------CC-cccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHHHH
Confidence 56677666532 22 467899999999 5 9999998654332333431
Q ss_pred ------------------cccccccccccCCCCCCCCCCCCCCCCCCC----CCcceecceeeeeccCCCCceEEEECCC
Q psy10229 64 ------------------GKCKTRFFDRKNSYLPMNPGLNSIFSFPPG----TEEGVLSYEPVTQMQIDYARPVIILGPL 121 (231)
Q Consensus 64 ------------------~~~r~~~~~rk~~~~~~~~~l~~~~~~~~~----~~~~~~~Ye~V~~~~~~~~RpVVL~GPs 121 (231)
...|++||+++.+.....+.... +..+. ++.++++||+|++++++++|||||+||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~r~~f~~~~~~r~~~k~~~~~--~~~d~~~~~~~~~~~~YE~V~~~~~~~~RPvVl~GP~ 154 (308)
T 3kfv_A 77 SLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRRGAKKTTQR--SREDLSALTRQGRYPPYERVVLREASFKRPVVILGPV 154 (308)
T ss_dssp HHHHHHCC-------------------------------------CCCHHHHHHHTCCSEEEEEEEECSSCCCEEEESTT
T ss_pred HHHHhhhhcccccccccccccccchhhhccccccccccccc--cccccccccccCCCcCchheeccccCCCCeEEEeCcc
Confidence 11355688765422111111111 11111 2346789999999999999999999999
Q ss_pred hHHHHHHHHhhCCCCcccccCCCCCcchhHHHHHHHHhc-cCceeEEeccCCccchHHHHHHHhcCCCCCCCcEEEEEec
Q psy10229 122 KDRINDDLISEFPEQFGSCVPPLGKMYDRSMKMEQEFGE-FFTAVVQGDMPEDIYQKVKEVIQEQSGPSIWGKHCILDVS 200 (231)
Q Consensus 122 k~~l~~~Ll~~~P~~F~~~vp~TG~dY~FVe~fe~~i~~-~Fd~iE~g~~~g~~Y~sV~~v~~~~~~~~~wGk~cILDv~ 200 (231)
+++|+++|++++|++|++|||.+ ++|++ +| | ..++|++++++ ||+||||||
T Consensus 155 k~~l~~~L~~~~P~~F~~~v~~~-----------r~i~~~~f--i--------s~~~V~~vl~~-------Gk~~ILDId 206 (308)
T 3kfv_A 155 ADIAMQKLTAEMPDQFEIAETVS-----------RTDSPSKI--I--------KLDTVRVIAEK-------DKHALLDVT 206 (308)
T ss_dssp HHHHHHHHHHHCTTTEEECCCC-------------------C--C--------CHHHHHHHHHT-------TCEEEECCC
T ss_pred HHHHHHHHHHhCccccccccccc-----------ccccCCCe--e--------cHHHHHHHHHC-------CCcEEEEEC
Confidence 99999999999999999999954 45777 88 6 45999999999 999999999
Q ss_pred HHHHHHHHHcCCCcEEEEEcCCCHHHHhhc
Q psy10229 201 GNAIKRLQVASLYPVAIFIKPKSVESIICR 230 (231)
Q Consensus 201 ~qgvk~Lr~~~~~PivIFI~ppS~e~L~~~ 230 (231)
+||+++|+.+.++|++|||+|||+++|+++
T Consensus 207 ~QGa~~lk~~~~~pi~IFI~PPS~eeL~~r 236 (308)
T 3kfv_A 207 PSAIERLNYVQYYPIVVFFIPESRPALKAL 236 (308)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEEeCCCHHHHHHH
Confidence 999999999999999999999999999974
No 5
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=2e-34 Score=268.31 Aligned_cols=183 Identities=19% Similarity=0.273 Sum_probs=127.3
Q ss_pred EEEEeeeccccccCCCCCCCCCCCCCccCCCCccc-----------cccccccccCCCCccceeeecc------------
Q psy10229 9 ITFMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL-----------EWHGRKKKMSRNNTAKITFRGK------------ 65 (231)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil-----------~Wwqa~~~~~~~~~~~~~l~~~------------ 65 (231)
-.|.++++|||- |-. +.+|+|++|||| +||||++.+..+.....|++..
T Consensus 105 ~~~~vral~dy~-------~~~-~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~~~~~~~ 176 (391)
T 3tsz_A 105 DSFYIRTHFEYE-------KES-PYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQY 176 (391)
T ss_dssp CCEEEEECSCBC-------CSS-TTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHHHHSSCC
T ss_pred cccccccccccC-------CCC-CCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHHHHHHHh
Confidence 345566665553 221 358899999999 3999999875432234566311
Q ss_pred --------cccccccccC---CCCCCCCCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCChHHHHHHHHhhCC
Q psy10229 66 --------CKTRFFDRKN---SYLPMNPGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLKDRINDDLISEFP 134 (231)
Q Consensus 66 --------~r~~~~~rk~---~~~~~~~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk~~l~~~Ll~~~P 134 (231)
.+.+|++++. +.....+... ..+..++++++++||+|++++++++|||||+|||.++|+++|++++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~--~~~~~~~~~~~~~YE~V~~~~~~~~r~iVlsGPsg~tl~~~L~~~~p 254 (391)
T 3tsz_A 177 TLPKTAGGDRADFWRFRGLRSSKRNLRKSRE--DLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEP 254 (391)
T ss_dssp C-----------------------------------------CCCSEEEEEEEECSSCCCEEEESTTHHHHHHHHHHHCT
T ss_pred hhccccccccccccccccccccccccccccc--ccccccccccCCCcceEECcCCCCCCEEEEECCCHHHHHHHHHhhCc
Confidence 0223333210 0000011111 12245678899999999999999999999999999999999999999
Q ss_pred CCcccccCCC------CCcchhHHHHHHHHhccCceeEEeccCCccchHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHH
Q psy10229 135 EQFGSCVPPL------GKMYDRSMKMEQEFGEFFTAVVQGDMPEDIYQKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQ 208 (231)
Q Consensus 135 ~~F~~~vp~T------G~dY~FVe~fe~~i~~~Fd~iE~g~~~g~~Y~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr 208 (231)
+.|.++++++ |++|||| ..++|++++++ ||+||||||+||+++|+
T Consensus 255 ~~~~~~tr~pR~gE~dG~~Y~Fv----------------------~~~~V~~~~~~-------Gk~~iLdId~qg~~~l~ 305 (391)
T 3tsz_A 255 DIYQIAKSEPRDAGTDQRSSGII----------------------RLHTIKQIIDQ-------DKHALLDVTPNAVDRLN 305 (391)
T ss_dssp TTEEECCCCCCCSSSCCC--CCC----------------------CHHHHHHHHTT-------TCEEEECCCHHHHHHHH
T ss_pred cccccccCCCCCcccCCccCCcC----------------------cHHHHHHHHHc-------CCEEEEEeCHHHHHHHH
Confidence 9999887776 8999884 23899999999 99999999999999999
Q ss_pred HcCCCcEEEEEcCCCHHHHhhc
Q psy10229 209 VASLYPVAIFIKPKSVESIICR 230 (231)
Q Consensus 209 ~~~~~PivIFI~ppS~e~L~~~ 230 (231)
.++++|++|||+|||+++|+++
T Consensus 306 ~~~~~p~~IFI~PPS~~~L~~~ 327 (391)
T 3tsz_A 306 YAQWYPIVVFLNPDSKQGVKTM 327 (391)
T ss_dssp HTTCCCEEEEEECCCHHHHHHH
T ss_pred hCCCCCEEEEEeCcCHHHHHHH
Confidence 9999999999999999999965
No 6
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=264.91 Aligned_cols=170 Identities=19% Similarity=0.268 Sum_probs=117.1
Q ss_pred CCCccCCCCccc-----------cccccccccCCCCccceeeec--------------------ccccccccccCCC-CC
Q psy10229 32 GLNSIFSFPPIL-----------EWHGRKKKMSRNNTAKITFRG--------------------KCKTRFFDRKNSY-LP 79 (231)
Q Consensus 32 ~~gl~F~~gdil-----------~Wwqa~~~~~~~~~~~~~l~~--------------------~~r~~~~~rk~~~-~~ 79 (231)
..+|+|++|||| +||||++++..+.....|++. ..|++||+.+... .+
T Consensus 112 ~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~f~~~~~~r~~k 191 (468)
T 3shw_A 112 PYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSK 191 (468)
T ss_dssp TTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHC----------------------
T ss_pred CCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHHHHHHHhhhhhccccccccchhhhccccccc
Confidence 368899999999 499999987644323456531 1134555332110 00
Q ss_pred CCCCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCChHHHHHHHHhhCCCCcccccCCC------CCcchhHHH
Q psy10229 80 MNPGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLKDRINDDLISEFPEQFGSCVPPL------GKMYDRSMK 153 (231)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk~~l~~~Ll~~~P~~F~~~vp~T------G~dY~FVe~ 153 (231)
+++.......+..++++++++||+|++++++++|||||+|||...|+++|++++|++|.++++-. |++|||+
T Consensus 192 k~~~~~~~~~~~~~~~~~~~~YEeV~~~~~~~~r~iVlsGPsG~Gl~~~Ll~~~p~~f~s~~TRpR~gE~dG~~Y~FT-- 269 (468)
T 3shw_A 192 RNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIYQIAKSEPRDAGTDQRSSGII-- 269 (468)
T ss_dssp ---------------CCCCCSEEEEEEECCSSCCCEEEESTTHHHHHHHHHHHCTTTEEECCCBC----------CBC--
T ss_pred cccccchhhcccccccccCCCcceeEcccCCCCCEEEEECCCHHHHHHHHHHhCCCceeeecCCCCCcccccccCCcc--
Confidence 11001111224567888999999999999999999999999977799999999999998876221 6777661
Q ss_pred HHHHHhccCceeEEeccCCccchHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhhc
Q psy10229 154 MEQEFGEFFTAVVQGDMPEDIYQKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIICR 230 (231)
Q Consensus 154 fe~~i~~~Fd~iE~g~~~g~~Y~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~~ 230 (231)
..++|++++++ ||+|||||++||+++|+.++++|++|||+|||+++|+++
T Consensus 270 --------------------s~~~V~~vl~~-------Gk~~iLdId~qg~~~l~~~~~~p~~IFI~PPS~e~L~~~ 319 (468)
T 3shw_A 270 --------------------RLHTIKQIIDQ-------DKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTM 319 (468)
T ss_dssp --------------------CHHHHHHHHTT-------TCEEEECCCHHHHHHHHHTTCCCEEEEEECSCHHHHHHH
T ss_pred --------------------cHHHHHHHHHC-------CCeEEEEeCHHHHHHHHhcCCCCEEEEEeCcCHHHHHHH
Confidence 23899999999 999999999999999999999999999999999999864
No 7
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=99.95 E-value=2.4e-29 Score=230.85 Aligned_cols=191 Identities=16% Similarity=0.240 Sum_probs=123.6
Q ss_pred eEEEEeeeccccccCCCCCCCCCCCCCccCCCCccc--------cccccccccCCCCccceeeeccc------ccccccc
Q psy10229 8 RITFMGKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKMSRNNTAKITFRGKC------KTRFFDR 73 (231)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~~~~~~~~~~l~~~~------r~~~~~r 73 (231)
-..|.++|.|||-...|++.||. ++||+|++|||| +||||++++..+ ..|++... |.+.-.+
T Consensus 36 ~~~~~vrAlfdY~~~~d~d~P~~-e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g---~~GlIPS~~~~E~~~~~~~~~ 111 (337)
T 4dey_A 36 PVAFAVRTNVSYSAAHEDDVPVP-GMAISFEAKDFLHVKEKFNNDWWIGRLVKEGC---EIGFIPSPVKLENMRLQHEQR 111 (337)
T ss_dssp CCCEEEEESSCBCCCGGGCCSST-TCBCCBCTTCEEEEEEECSSSEEEEEESSTTC---CCEEEECHHHHHHHHHHHHHH
T ss_pred CccEEEEEccccCCCCCCCCCcc-cccccccCCCEEEEEecCCCCeEEEEECCCCC---CccEecCHHHHHHHHHhhhhc
Confidence 34688999999999999999998 899999999999 599999986432 36764221 1111100
Q ss_pred cC--CC--CCCCCCCCCCCCCCCCCCcceecceeeeeccCCCCceEEEECCCh------HHHHHHHHhhCCCCcccccCC
Q psy10229 74 KN--SY--LPMNPGLNSIFSFPPGTEEGVLSYEPVTQMQIDYARPVIILGPLK------DRINDDLISEFPEQFGSCVPP 143 (231)
Q Consensus 74 k~--~~--~~~~~~l~~~~~~~~~~~~~~~~Ye~V~~~~~~~~RpVVL~GPsk------~~l~~~Ll~~~P~~F~~~vp~ 143 (231)
.+ +. ..+.+.+++ ..+.+++||+|. ..|||||+||+. +-+.++|+...|.+|+.+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~-------k~~~~~~Ye~vp-----~~RPvvlvGP~~~g~~~td~m~~~l~d~l~~~F~~~i~~ 179 (337)
T 4dey_A 112 AKEFKLHSKEKRMPFFK-------KTEHTPPYDVVP-----SMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISI 179 (337)
T ss_dssp CC--------------------------CCSEEEEC-----SSCCEEEECSSCTTSHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred cccCCCCcccccccccc-------cCCCCCCccccC-----CCCceEEECCccccchhHHHHHHHHHHhhHHhcCCccce
Confidence 00 00 001111111 136789999995 459999999992 346677777777778888877
Q ss_pred C---------CCcc--hhH--HHHHHHHhc-cCceeEEeccCCccchHHHHHHH---hcCCCCCCCcEEEEEecHH-HHH
Q psy10229 144 L---------GKMY--DRS--MKMEQEFGE-FFTAVVQGDMPEDIYQKVKEVIQ---EQSGPSIWGKHCILDVSGN-AIK 205 (231)
Q Consensus 144 T---------G~dY--~FV--e~fe~~i~~-~Fd~iE~g~~~g~~Y~sV~~v~~---~~~~~~~wGk~cILDv~~q-gvk 205 (231)
| ++.| +++ ..|++.+.. .| +|+. +.|+++.+ + |++||||||+| |++
T Consensus 180 tR~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~~--~ev~-------seVe~i~~v~~~-------Gk~vILDIDvQnGa~ 243 (337)
T 4dey_A 180 TRVTADISLAKRSVLNNPSKHAIIERSNTRSSL--AEVQ-------SEIERIFELART-------LQLVVLDADTINHPA 243 (337)
T ss_dssp EEECSCGGGC-------------------CCCH--HHHH-------HHHHHHHHHTTT-------CCEEEEEETTCCSGG
T ss_pred Eeecchhhhcchhhhhcccchhhhcccccccch--HHHH-------hHHHHHHHHHhC-------CCEEEEEeCcHHHHH
Confidence 7 3332 222 344544444 44 3321 44555444 6 99999999998 999
Q ss_pred HHHHcCCCcEEEEEcCCCHHHHhhc
Q psy10229 206 RLQVASLYPVAIFIKPKSVESIICR 230 (231)
Q Consensus 206 ~Lr~~~~~PivIFI~ppS~e~L~~~ 230 (231)
+|+...++|++|||.|||+++|+++
T Consensus 244 qlk~~~~~~i~IFI~PPS~eeLe~R 268 (337)
T 4dey_A 244 QLSKTSLAPIVVYVKISSPKVLQRL 268 (337)
T ss_dssp GTTTSSCCCEEEEECCSCHHHHHHH
T ss_pred HHHhcCCCCEEEEEECcCHHHHHHH
Confidence 9999999999999999999999975
No 8
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.95 E-value=3e-28 Score=206.24 Aligned_cols=110 Identities=32% Similarity=0.576 Sum_probs=104.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCccc
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPEDIY 175 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~~Y 175 (231)
.|||||+||| |++|+++|++++|+.|.++|||| |+||||| ++|++++++ +| +||++++||+|
T Consensus 1 ~RpIVi~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~f--lE~~~~~g~~Y 78 (186)
T 1ex7_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEF--IEWAQFSGNYY 78 (186)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCE--EEEEEEcCcee
Confidence 3899999999 99999999999999999999999 8999999 999999999 99 99999999999
Q ss_pred ----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHc-CCCcEEEEEcCCCHHHHhhc
Q psy10229 176 ----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVA-SLYPVAIFIKPKSVESIICR 230 (231)
Q Consensus 176 ----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~-~~~PivIFI~ppS~e~L~~~ 230 (231)
++|++++++ |++||||++++|+++|+.. .+.|++|||.|||.++|++.
T Consensus 79 Gt~~~~v~~~l~~-------g~~vil~id~~g~~~~k~~~~~~~~~Ifi~pps~e~L~~R 131 (186)
T 1ex7_A 79 GSTVASVKQVSKS-------GKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKR 131 (186)
T ss_dssp EEEHHHHHHHHHH-------TSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHH
T ss_pred eeecceeeehhhC-------CCEEEecCCHHHHHHHHHhcccCceEEEEeCCCHHHHHHH
Confidence 889999999 9999999999999999985 56899999999999999863
No 9
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.90 E-value=2.8e-24 Score=183.72 Aligned_cols=111 Identities=24% Similarity=0.466 Sum_probs=102.8
Q ss_pred eccCCCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEec
Q psy10229 106 QMQIDYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGD 169 (231)
Q Consensus 106 ~~~~~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~ 169 (231)
.+++...++|||+||| |++|.++|+..+|+.|..++++| |++|+|+ ++|++++.+ .| +||++
T Consensus 13 ~~~~~~g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~f--le~~~ 90 (197)
T 3ney_A 13 NLYFQGRKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEF--LEFGS 90 (197)
T ss_dssp ---CCSCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCE--EEEEE
T ss_pred cCCCCCCCEEEEECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCeeccccceeccHHHhhhhhhhhhh--hhhhh
Confidence 3566788999999999 99999999999998899999987 8999999 999999999 99 99999
Q ss_pred cCCccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHH
Q psy10229 170 MPEDIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVE 225 (231)
Q Consensus 170 ~~g~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e 225 (231)
+.||+| ++|++++++ |++||||+|+||+++|+...+.|++|||.|||++
T Consensus 91 ~~~n~YGt~~~~v~~~l~~-------G~~vildid~qg~~~~~~~~~~~~~Ifi~Pps~~ 143 (197)
T 3ney_A 91 YQGNMFGTKFETVHQIHKQ-------NKIAILDIEPQTLKIVRTAELSPFIVFIAPTDQG 143 (197)
T ss_dssp ETTEEEEEEHHHHHHHHHT-------TCEEEEECCGGGHHHHCSTTTCEEEEEEEECCBS
T ss_pred hhceecccchhhHHHHHhc-------CCeEEEEECHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 999999 779999999 9999999999999999999999999999999985
No 10
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.75 E-value=1.8e-18 Score=142.08 Aligned_cols=111 Identities=24% Similarity=0.496 Sum_probs=100.6
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCc
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPED 173 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~ 173 (231)
...++++|+||| |+||.+.|...+|..|..+++|| |++|+|+ ++|.+++.+ .| +|++++.+|
T Consensus 3 ~~g~~i~i~GpsGsGKSTL~~~L~~~~~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~--l~~~~~~~n 80 (180)
T 1kgd_A 3 HMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEY--LEYGSHEDA 80 (180)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCc--eEEEEEcCc
Confidence 456899999999 99999999999886677788876 7899999 889999998 99 999999999
Q ss_pred cc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 174 IY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 174 ~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
+| ++|++++++ |++||||++++|+++++...+.+++|||.|||.++|++
T Consensus 81 ~yg~~~~~i~~~l~~-------g~~vil~id~~g~~~~~~~~~~~~~ifi~~p~~~~l~~ 133 (180)
T 1kgd_A 81 MYGTKLETIRKIHEQ-------GLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLN 133 (180)
T ss_dssp EEEEEHHHHHHHHHT-------TCEEEEECCGGGHHHHSSTTTCEEEEEEECCSCCTTSC
T ss_pred cccccHHHHHHHHHC-------CCeEEEEECHHHHHHHHHhCCCcEEEEEECCCHHHHHh
Confidence 99 679999999 99999999999999999887889999999999988765
No 11
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.74 E-value=6.1e-18 Score=139.41 Aligned_cols=109 Identities=31% Similarity=0.570 Sum_probs=97.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCccc
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPEDIY 175 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~~Y 175 (231)
+++++|+||+ |+||.+.|....|..|+.+++|| |.+|+|+ +.|..++.+ .| +|++++.+++|
T Consensus 1 ~~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~y 78 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEF--IEWAQFSGNYY 78 (186)
T ss_dssp CCCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcce--eeEEEEeceec
Confidence 3789999999 99999999999998898888877 7899999 889999998 99 99999999999
Q ss_pred ----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHH-cCCCcEEEEEcCCCHHHHhh
Q psy10229 176 ----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQV-ASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 176 ----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~-~~~~PivIFI~ppS~e~L~~ 229 (231)
++|++++++ |++||||++++|++.|+. ..+.+++|||.|||.+.|++
T Consensus 79 g~~~~~i~~~l~~-------g~~~il~~~~~g~~~l~~~~~~~~~~i~i~~p~~~~l~~ 130 (186)
T 3a00_A 79 GSTVASVKQVSKS-------GKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKK 130 (186)
T ss_dssp EEEHHHHHHHHHT-------TCEEEEECCHHHHHHHHTCGGGCCEEEEEECSCC-----
T ss_pred cCcHHHHHHHHHc-------CCeEEEEEcHHHHHHHHHhcCCCeEEEEEECcCHHHHHH
Confidence 689999999 999999999999999999 88999999999999888875
No 12
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1e-17 Score=140.71 Aligned_cols=110 Identities=15% Similarity=0.261 Sum_probs=101.5
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCcc
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPEDI 174 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~~ 174 (231)
..+.|+|+||+ |+||.+.|...+|..|..++++| |++|+|+ ++|++++.+ .| +|++++.|++
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~--le~~~~~~~~ 84 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKM--LEYAEYVGNY 84 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTTCCCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCCcEEEEEecccccCcCcccCCceeEEecHHHHHHHHhcCcE--EEEEEEcccc
Confidence 46789999999 99999999999887788888877 7899999 889999999 99 9999999999
Q ss_pred c----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 175 Y----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 175 Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
| +.+++++++ |++||||++++|+.+++.....|++|||.|||.++|++
T Consensus 85 yg~~~~~i~~~l~~-------g~~vild~~~~g~~~~~~~~~~~~~i~i~~ps~~~l~~ 136 (208)
T 3tau_A 85 YGTPLEYVEEKLAA-------GVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKN 136 (208)
T ss_dssp EEEEHHHHHHHHHT-------TCCEEEECCHHHHHHHHHHCTTSEEEEEECTTTTTSSC
T ss_pred CCCcHHHHHHHHHc-------CCeEEEEeeHHHHHHHHHhCCCeEEEEEeCCCHHHHHH
Confidence 9 779999999 99999999999999999999999999999999887764
No 13
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.67 E-value=4.6e-16 Score=129.64 Aligned_cols=111 Identities=24% Similarity=0.471 Sum_probs=99.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCc
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPED 173 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~ 173 (231)
...++|+|+||+ |+||.++|.+..|..|..+++|| |.+|+|+ ++|++++.+ .| +|++++.|+
T Consensus 10 ~~~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 87 (204)
T 2qor_A 10 ARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQF--LEFDKYANN 87 (204)
T ss_dssp CCCCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCE--EEEEEETTE
T ss_pred ccCCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCC--EEeHHhCCC
Confidence 356889999999 99999999999886688888887 6799999 889999998 99 999999999
Q ss_pred cc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCC--CcEEEEEcCCCHHHHhh
Q psy10229 174 IY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASL--YPVAIFIKPKSVESIIC 229 (231)
Q Consensus 174 ~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~--~PivIFI~ppS~e~L~~ 229 (231)
.| ++|++++++ |+.||+|+++++++.++.... .+++|||.|+|.+.|.+
T Consensus 88 ~~~~~~~~i~~~l~~-------g~~vi~d~~~~~~~~l~~~~~~~~~~~i~l~~~s~e~l~~ 142 (204)
T 2qor_A 88 FYGTLKSEYDLAVGE-------GKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLG 142 (204)
T ss_dssp EEEEEHHHHHHHHHT-------TCEEEEECCHHHHHHHHHCSSCSCCEEEEEECSCHHHHHH
T ss_pred eecCCHHHHHHHHHc-------CCeEEEEECHHHHHHHHHhcCCCCeEEEEEcCCCHHHHHH
Confidence 99 679999999 999999999999999987655 67999999999998875
No 14
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.56 E-value=1.6e-14 Score=120.81 Aligned_cols=110 Identities=26% Similarity=0.512 Sum_probs=98.7
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCcc
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPEDI 174 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~~ 174 (231)
..++++|+||+ |+||.+.|...+|..|+.+++|| |.+|+|+ ++|.+.+.+ .| +|++++.+|+
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~~L~~~~~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~--l~~~~~~~n~ 80 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDF--IEHAEFSGNL 80 (198)
T ss_dssp --CCEEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCE--EEEEEETTEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCchhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCC--EeeeeecCcc
Confidence 35789999999 99999999998888888888775 7889998 889999988 99 9999999999
Q ss_pred c----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 175 Y----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 175 Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
| +.++++++. |+.|++|++++|++.++...+.|.+|||.||+++.|.+
T Consensus 81 ~g~~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~p~~~ilde 132 (198)
T 1lvg_A 81 YGTSKEAVRAVQAM-------NRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQ 132 (198)
T ss_dssp EEEEHHHHHHHHHT-------TCEEEEECCHHHHHHHTTSSCCCEEEEEECSCHHHHHH
T ss_pred CCCCHHHHHHHHHc-------CCcEEEECCHHHHHHHHhcCCCcEEEEEeCCCHHHHHH
Confidence 9 689999998 99999999999999998878899999999999888765
No 15
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.53 E-value=5.6e-14 Score=120.56 Aligned_cols=111 Identities=17% Similarity=0.249 Sum_probs=97.7
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCCC-CcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFPE-QFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPE 172 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P~-~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g 172 (231)
...++++|+||| |+||.+.|....|. .+..++++| |.+|+|+ +.|+.++.+ .| +|+.++.|
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f--~E~~~~~~ 91 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAF--LEHAEVFG 91 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHH--HHHHHHHh
Confidence 356899999999 99999999998873 456677776 6889999 789999988 99 99999999
Q ss_pred ccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 173 DIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 173 ~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
++| +.|++++++ |++||||+|++++++++..-..+++|||.||++++|++
T Consensus 92 ~~yg~~~~~v~~~l~~-------G~illLDLD~~~~~~i~~~l~~~~tI~i~th~~~~l~~ 145 (219)
T 1s96_A 92 NYYGTSREAIEQVLAT-------GVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDR 145 (219)
T ss_dssp EEEEEEHHHHHHHHTT-------TCEEEEECCHHHHHHHHHHCTTCEEEEEECSSHHHHHH
T ss_pred ccCCCCHHHHHHHHhc-------CCeEEEEECHHHHHHHHHHccCCEEEEEECCCHHHHHH
Confidence 988 579999999 99999999999999999876678999999999998875
No 16
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.27 E-value=4.2e-11 Score=98.02 Aligned_cols=108 Identities=20% Similarity=0.301 Sum_probs=92.9
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCccc
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPEDIY 175 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~~Y 175 (231)
...++|+||+ |+||.+.|....|. +.....++ |..|+|. ..|...... .| ++++.+.++.|
T Consensus 7 g~ii~l~Gp~GsGKSTl~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 83 (205)
T 3tr0_A 7 ANLFIISAPSGAGKTSLVRALVKALAE-IKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAF--LEHATIYERHY 83 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSSS-EEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCE--EEEEEETTEEE
T ss_pred CcEEEEECcCCCCHHHHHHHHHhhCCC-eEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcE--Eeeeeeecccc
Confidence 4678999999 99999999998873 33333322 7889999 778888877 99 99999999988
Q ss_pred ----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 176 ----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 176 ----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
+.+++++++ |++||+|++++++..++.....+.+||+.||+.+.+.+
T Consensus 84 ~~~~~~i~~~l~~-------g~~vi~d~~~~~~~~~~~~~~~~~~v~~~~~~~e~l~~ 134 (205)
T 3tr0_A 84 GTEKDWVLRQLKA-------GRDVLLEIDWQGARQIRELFPPALSIFILPPSIEALRE 134 (205)
T ss_dssp EEEHHHHHHHHHT-------TCEEEEECCHHHHHHHHHHCTTCEEEEEECSCHHHHHH
T ss_pred cchHHHHHHHHHc-------CCeEEEEECHHHHHHHHHhCCCcEEEEEECcCHHHHHH
Confidence 689999999 99999999999999999998899999999999988865
No 17
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.22 E-value=3.8e-11 Score=101.35 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=88.9
Q ss_pred CCceEEEECCC---hHHHHHHHH-hhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCc
Q psy10229 111 YARPVIILGPL---KDRINDDLI-SEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPED 173 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll-~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~ 173 (231)
....++|+||+ |+||.+.|. ...|. +...+++| |.+|+|+ +.|...+.. .| ++++.+.++
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 102 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQKNN-IVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEI--IEHAEVFGN 102 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC----C-EEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCCCC-cccccccCCCCCCccccCCCeEEEecHHHhhhhhhcCce--ehhhhhccc
Confidence 45789999999 999999999 87764 45555544 7889999 788888888 99 999999999
Q ss_pred cc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcC-CCcEEEEEcCCCHHHHhh
Q psy10229 174 IY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVAS-LYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 174 ~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~-~~PivIFI~ppS~e~L~~ 229 (231)
.| ..+++++++ |+.||+|+++++...++... ..+.+|||.||+.+.|.+
T Consensus 103 ~~~~~~~~i~~~~~~-------~~~vild~~~~g~~~~~~~~~~~~~~v~v~~~~~~~l~~ 156 (231)
T 3lnc_A 103 FYGVPRKNLEDNVDK-------GVSTLLVIDWQGAFKFMEMMREHVVSIFIMPPSMEELRR 156 (231)
T ss_dssp EEEEECTTHHHHHHH-------TCEEEEECCHHHHHHHHHHSGGGEEEEEEECSCHHHHHH
T ss_pred cCCCCHHHHHHHHHc-------CCeEEEEcCHHHHHHHHHhcCCCeEEEEEECCcHHHHHH
Confidence 98 679999999 99999999999999998865 567899999999998865
No 18
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.10 E-value=7.6e-10 Score=93.64 Aligned_cols=111 Identities=24% Similarity=0.448 Sum_probs=92.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCc
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPED 173 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~ 173 (231)
.....++|+||+ |+||.+.|...+|..+...+++| |.+|.|. +.|..++.. .| +|++.+.++
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~~L~g~~pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--l~~~~~~~~ 98 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDF--LEYDNYANN 98 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHHHHHHHSTTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhccch--hhhhhcccc
Confidence 356889999999 99999999998873333344332 7789998 778888866 89 999999999
Q ss_pred cc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcC--CCcEEEEEcCCCHHHHhh
Q psy10229 174 IY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVAS--LYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 174 ~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~--~~PivIFI~ppS~e~L~~ 229 (231)
.| ..++++++. ++.+++|++++|.+++|.+- ..|..||+.+|++..|.+
T Consensus 99 ~~g~~~~~i~~~l~~-------~~~~il~~~lsggq~qR~~i~~~~~~~~ll~~~~~~~Lde 153 (218)
T 1z6g_A 99 FYGTLKSEYDKAKEQ-------NKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLS 153 (218)
T ss_dssp EEEEEHHHHHHHHHT-------TCEEEEEECHHHHHHHTTCSSCCSCEEEEEECSCHHHHHH
T ss_pred cCCCcHHHHHHHHhC-------CCcEEEEecHHHHHHHHHHhcCCCcEEEEEeCcCHHHHHH
Confidence 88 678999999 99999999999999999876 577999999999988865
No 19
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=98.98 E-value=3.8e-09 Score=86.18 Aligned_cols=109 Identities=18% Similarity=0.300 Sum_probs=84.8
Q ss_pred CCceEEEECCC---hHHHHHHHHhhC-CCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCCc
Q psy10229 111 YARPVIILGPL---KDRINDDLISEF-PEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPED 173 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~-P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g~ 173 (231)
....|+|+||+ |+|+.+.|.... | .++..+.++ |..|.|. +.|...+.+ .+ +++..+.++
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDPST-SYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQF--IEYAEYVGN 81 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCTTC-CEECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEETTE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhhCC-CeEEecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCe--EEEEeECCe
Confidence 45689999999 999999998877 5 344344332 5778888 678888888 88 999999998
Q ss_pred cc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 174 IY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 174 ~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
+| +.++++++. |+.||+|+.+.+...++.....+++||+.||+.+.+.+
T Consensus 82 ~~g~~~~~i~~~l~~-------g~~vv~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 134 (207)
T 2j41_A 82 YYGTPVQYVKDTMDE-------GHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRE 134 (207)
T ss_dssp EEEEEHHHHHHHHHT-------TCEEEEECCGGGHHHHHHHCTTSEEEEEECCC------
T ss_pred ecCCCHHHHHHHHHc-------CCeEEEEECHHHHHHHHHhcCCeEEEEEECCCHHHHHH
Confidence 77 678888888 99999999999998888765578999999988776543
No 20
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.22 E-value=1.4e-05 Score=66.21 Aligned_cols=111 Identities=17% Similarity=0.254 Sum_probs=86.1
Q ss_pred CCCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCC----------CCcchhH--HHHHHHHhc-cCceeEEeccCC
Q psy10229 109 IDYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQGDMPE 172 (231)
Q Consensus 109 ~~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g~~~g 172 (231)
......++|+||+ |+|+.+.|....|..+ ..++++ |..|.|. ..|...... .| +++..+.+
T Consensus 17 i~~Gei~~l~GpnGsGKSTLl~~l~gl~~~i~-~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~l--~~~~~~~~ 93 (207)
T 1znw_A 17 AAVGRVVVLSGPSAVGKSTVVRCLRERIPNLH-FSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGEL--LEWAEIHG 93 (207)
T ss_dssp --CCCEEEEECSTTSSHHHHHHHHHHHSTTCE-ECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCE--EEEEEEGG
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHhhCCceE-EcccccccCCcccccCCCeeEecCHHHHHHHHhcCCc--eeehhhcC
Confidence 3456889999999 9999999988876432 222221 6778888 667777776 78 88887777
Q ss_pred --ccc----hHHHHHHHhcCCCCCCCcEEEEEecHHHHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 173 --DIY----QKVKEVIQEQSGPSIWGKHCILDVSGNAIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 173 --~~Y----~sV~~v~~~~~~~~~wGk~cILDv~~qgvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
.+| ..+++.+++ ++.++++++..++..++........+++..|++..|.+
T Consensus 94 n~~~~g~~~~~~~~~~~~-------~~~~~~~l~~~gl~~~~~~~~~~lS~l~~~p~~~~LDe 149 (207)
T 1znw_A 94 GLHRSGTLAQPVRAAAAT-------GVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQA 149 (207)
T ss_dssp GTEEEEEEHHHHHHHHHH-------TCCEEEECCHHHHHHHHHHCTTSEEEEEECSCHHHHHH
T ss_pred chhhcCCcHHHHHHHHHc-------CCeEEEEeCHHHHHHHHHhcCCcEEEEEECCCHHHHHH
Confidence 455 568888888 89999999999999998888888899999998876654
No 21
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=97.50 E-value=3.4e-05 Score=67.99 Aligned_cols=103 Identities=8% Similarity=0.103 Sum_probs=64.6
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCcccccCCCCCcchhH--HHHHHHHhccCceeEEe-ccCCccc-----hHHH
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQFGSCVPPLGKMYDRS--MKMEQEFGEFFTAVVQG-DMPEDIY-----QKVK 179 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~TG~dY~FV--e~fe~~i~~~Fd~iE~g-~~~g~~Y-----~sV~ 179 (231)
.+..|||+||+ |+|+.++|.+.++..+ ..|+. |+.+. ..|+.+++. | .++. ++.+++| ..|+
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~~~~~~~-~~Is~---D~~R~~~~~~~~~~~~-~--~~~a~~~~~~~~~~~~~~~v~ 104 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFEETQGNV-IVIDN---DTFKQQHPNFDELVKL-Y--EKDVVKHVTPYSNRMTEAIIS 104 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCC-EEECT---HHHHTTSTTHHHHHHH-H--GGGCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCe-EEEec---hHhHHhchhhHHHHHH-c--cchhhhhhhHHHHHHHHHHHH
Confidence 45678999999 9999999999876432 34543 33332 233333332 3 3433 3335555 4567
Q ss_pred HHHHhcCCCCCCCcEEEEEecHHHHH---HH----HHcCCC-cEEEEEcCCCHHHH
Q psy10229 180 EVIQEQSGPSIWGKHCILDVSGNAIK---RL----QVASLY-PVAIFIKPKSVESI 227 (231)
Q Consensus 180 ~v~~~~~~~~~wGk~cILDv~~qgvk---~L----r~~~~~-PivIFI~ppS~e~L 227 (231)
+.+++ |+.+|||++.++.. .+ +..++. -+++|+.||+...+
T Consensus 105 ~~l~~-------g~~vIld~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~~l 153 (287)
T 1gvn_B 105 RLSDQ-------GYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYL 153 (287)
T ss_dssp HHHHH-------TCCEEECCCCCCSHHHHHHHHHHHTTTCEEEEEEECCCHHHHHH
T ss_pred HHHhc-------CCeEEEECCCCCHHHHHHHHHHHHhCCCcEEEEEEECCHHHHHH
Confidence 77888 99999999887754 33 333333 25677788887753
No 22
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=96.72 E-value=0.0011 Score=60.66 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=57.6
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCc--------ccccCCC----------CCcchhH--HHH-HHHHhc-cCceeE
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQF--------GSCVPPL----------GKMYDRS--MKM-EQEFGE-FFTAVV 166 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F--------~~~vp~T----------G~dY~FV--e~f-e~~i~~-~Fd~iE 166 (231)
.+.|||+||+ |++|...|.+..+.-| -..++.+ |+.|||+ .++ ...+.. .| .+
T Consensus 40 ~~lIvI~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F--~~ 117 (339)
T 3a8t_A 40 EKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADF--RS 117 (339)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHH--HH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHH--HH
Confidence 3578999999 9999999999876322 1122222 8889987 332 222222 22 11
Q ss_pred EeccCCccchHHHHHHHhcCCCCCCCcEEEEE-------------------ecHHHHH---HHHHcCCCcEEEEEcCCCH
Q psy10229 167 QGDMPEDIYQKVKEVIQEQSGPSIWGKHCILD-------------------VSGNAIK---RLQVASLYPVAIFIKPKSV 224 (231)
Q Consensus 167 ~g~~~g~~Y~sV~~v~~~~~~~~~wGk~cILD-------------------v~~qgvk---~Lr~~~~~PivIFI~ppS~ 224 (231)
. -...|+++.++ |+.+|+- +|++++. .+.....+...||..+|+.
T Consensus 118 ~------a~~~i~~i~~~-------g~~pIlvGGtglYi~all~g~~~p~~~d~~~a~~~~~~~~~~~~~~~~i~L~~~r 184 (339)
T 3a8t_A 118 L------AGKAVSEITGR-------RKLPVLVGGSNSFIHALLVDRFDSSGPGVFEEGSHSVVSSELRYDCCFLWVDVSV 184 (339)
T ss_dssp H------HHHHHHHHHHT-------TCEEEEECCCHHHHHHHHBSSCCTTCC-------------CBSSEEEEEEEECCH
T ss_pred H------HHHHHHHHHhc-------CCeEEEEcCHHHHHHHHHhCCCCCcccChhhhcccCccccccccCeEEEEEeCCH
Confidence 1 11667788888 9998884 4555444 2222222345566666788
Q ss_pred HHHhh
Q psy10229 225 ESIIC 229 (231)
Q Consensus 225 e~L~~ 229 (231)
++|.+
T Consensus 185 e~L~~ 189 (339)
T 3a8t_A 185 KVLTD 189 (339)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88865
No 23
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=96.36 E-value=0.00033 Score=65.74 Aligned_cols=70 Identities=17% Similarity=0.301 Sum_probs=49.6
Q ss_pred ceEEEECCC---hHHHHHHHHhhCCCCcc--------cccCCC----------CCcchhH--HHHHHHHhc-cCceeEEe
Q psy10229 113 RPVIILGPL---KDRINDDLISEFPEQFG--------SCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQG 168 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P~~F~--------~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~g 168 (231)
+.|+|+||+ |++|..+|.+.++..+- ..+++| |+.|||+ ..+.+.+.. .| +|++
T Consensus 3 ~~i~i~GptgsGKttla~~La~~~~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F--~~~a 80 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRF--ETEC 80 (409)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHH--HHHH
T ss_pred cEEEEECcchhhHHHHHHHHHHHCCCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHH--HHHH
Confidence 467899999 99999999988774221 123433 8999998 445555555 55 4443
Q ss_pred ccCCccchHHHHHHHhcCCCCCCCcEEEE
Q psy10229 169 DMPEDIYQKVKEVIQEQSGPSIWGKHCIL 197 (231)
Q Consensus 169 ~~~g~~Y~sV~~v~~~~~~~~~wGk~cIL 197 (231)
...|+++.++ |+++||
T Consensus 81 ------~~~i~~i~~~-------g~~pil 96 (409)
T 3eph_A 81 ------MNAIEDIHRR-------GKIPIV 96 (409)
T ss_dssp ------HHHHHHHHTT-------TCEEEE
T ss_pred ------HHHHHHHHhc-------CCCEEE
Confidence 3778888888 999888
No 24
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=96.07 E-value=0.0019 Score=58.79 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=48.2
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCc--------ccccCCC----------CCcchhH--HHHHHHHhc-cCceeEE
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQF--------GSCVPPL----------GKMYDRS--MKMEQEFGE-FFTAVVQ 167 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F--------~~~vp~T----------G~dY~FV--e~fe~~i~~-~Fd~iE~ 167 (231)
.+.|||+||+ |++|..+|.+.++..+ -..++.+ |+.|||+ .++++.+.. .| .
T Consensus 3 ~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F--~-- 78 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADF--Q-- 78 (322)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHH--H--
T ss_pred CcEEEEECCCcCCHHHHHHHHHHhCccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHH--H--
Confidence 4568899999 9999999999877321 1233333 8999998 444443333 33 2
Q ss_pred eccCCccchHHHHHHHhcCCCCCCCcEEEE
Q psy10229 168 GDMPEDIYQKVKEVIQEQSGPSIWGKHCIL 197 (231)
Q Consensus 168 g~~~g~~Y~sV~~v~~~~~~~~~wGk~cIL 197 (231)
+...+.|+++.++ |+++||
T Consensus 79 ----~~a~~~i~~i~~~-------gk~pIl 97 (322)
T 3exa_A 79 ----DLATPLITEIHER-------GRLPFL 97 (322)
T ss_dssp ----HHHHHHHHHHHHT-------TCEEEE
T ss_pred ----HHHHHHHHHHHhC-------CCcEEE
Confidence 2123788888888 999987
No 25
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=95.91 E-value=0.0024 Score=58.00 Aligned_cols=74 Identities=14% Similarity=0.224 Sum_probs=48.3
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCc--------ccccCCC----------CCcchhH--HHHHHHHhccCceeEE
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQF--------GSCVPPL----------GKMYDRS--MKMEQEFGEFFTAVVQ 167 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F--------~~~vp~T----------G~dY~FV--e~fe~~i~~~Fd~iE~ 167 (231)
.++.|||+||+ |++|..+|.+.++..+ -..++.+ |+.|||+ .++.+.+..
T Consensus 9 ~~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~qvY~~~~igTakp~~~E~~~v~hhlid~~~~~e~~s~------- 81 (316)
T 3foz_A 9 LPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSA------- 81 (316)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCH-------
T ss_pred CCcEEEEECCCccCHHHHHHHHHHhCCCcEEecccccccccccccCCCCCHHHHcCCCEEEeccCCccccccH-------
Confidence 45678999999 9999999999877321 1223333 8889997 333333222
Q ss_pred eccCCccchHHHHHHHhcCCCCCCCcEEEEE
Q psy10229 168 GDMPEDIYQKVKEVIQEQSGPSIWGKHCILD 198 (231)
Q Consensus 168 g~~~g~~Y~sV~~v~~~~~~~~~wGk~cILD 198 (231)
|+|.......|+++.++ |+++||-
T Consensus 82 ~~f~~~a~~~i~~i~~~-------g~~pilV 105 (316)
T 3foz_A 82 ADFRRDALAEMADITAA-------GRIPLLV 105 (316)
T ss_dssp HHHHHHHHHHHHHHHHT-------TCEEEEE
T ss_pred HHHHHHHHHHHHHHHhC-------CCcEEEE
Confidence 22211122678889998 9999874
No 26
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.92 E-value=0.014 Score=41.22 Aligned_cols=37 Identities=11% Similarity=-0.113 Sum_probs=28.1
Q ss_pred eeeccccccCCCCCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 13 GKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 13 ~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
.++.++|-...++..|+. +-.|+|++|||+ .||+++.
T Consensus 10 ~~Al~dy~~~~~~~~~~~-~~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 55 (76)
T 2csi_A 10 MVALYDYDPRESSPNVDV-EAELTFCTGDIITVFGEIDEDGFYYGEL 55 (76)
T ss_dssp EECSSCCCTTTTSCSSST-TTSCCCCTTCEEEEESSCCSSSEEEEEE
T ss_pred EEEcccCCCCCcccCCCC-CCcccCCCCCEEEEeEecCCCCeEEEEE
Confidence 456677766777777876 456799999999 2999875
No 27
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.66 E-value=0.023 Score=40.04 Aligned_cols=37 Identities=0% Similarity=-0.224 Sum_probs=25.8
Q ss_pred eeeccccccCCCCCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 13 GKCKTRFFDRKNSYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 13 ~~~~~~~~~~~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
.++.++|-...++..|+. +-.|+|++|||+ .||+++.
T Consensus 10 ~~Alydy~~~~~~~~~~~-~~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 55 (75)
T 2ege_A 10 MIAALDYDPGDGQMGGQG-KGRLALRAGDVVMVYGPMDDQGFYYGEL 55 (75)
T ss_dssp EEESSCBCTTTTCCCSSS-CCBCCBCTTCEEEEESCCCTTCEEEEES
T ss_pred EEECCCCCCCccccCCCC-CCcceECCCCEEEEeEccCCCCEEEEEE
Confidence 345555555555666664 456799999998 3999885
No 28
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=94.46 E-value=0.099 Score=40.91 Aligned_cols=26 Identities=35% Similarity=0.420 Sum_probs=21.4
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCc
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQF 137 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F 137 (231)
++.|+|+||+ |+||.+.|.+..+..|
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l~~~~ 31 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPW 31 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcCCCe
Confidence 3678999999 9999999998876433
No 29
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=93.42 E-value=0.038 Score=38.00 Aligned_cols=28 Identities=14% Similarity=0.251 Sum_probs=19.5
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.|-.++=.|+|+.|||+ .||.++.
T Consensus 9 lydy~~~~~~e~Ls~~~Gd~i~v~~~~~~~Ww~g~~ 44 (60)
T 2lx7_A 9 LYPFSGERHGQGLRFAAGELITLLQVPDGGWWEGEK 44 (60)
T ss_dssp SCCCCSCCCSSCCCCCTTCEEEBSCCCTTSCEEEEC
T ss_pred CcccCCCCCCCCccCCCCCEEEEeEecCCCeEEEEe
Confidence 345555544223699999998 4999975
No 30
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=92.95 E-value=0.044 Score=38.61 Aligned_cols=33 Identities=18% Similarity=0.475 Sum_probs=25.1
Q ss_pred cccCCCCCCCCCCCCCccCCCCccc-------------cccccccc
Q psy10229 19 FFDRKNSYLPMNPGLNSIFSFPPIL-------------EWHGRKKK 51 (231)
Q Consensus 19 ~~~~~~~~~p~~~~~gl~F~~gdil-------------~Wwqa~~~ 51 (231)
++-+..+|.|.+++-.|+|++|||+ .||+++..
T Consensus 9 ~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~ 54 (69)
T 1nm7_A 9 FARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTK 54 (69)
T ss_dssp CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEET
T ss_pred EEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeC
Confidence 3446677888876557799999998 39999863
No 31
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.89 E-value=0.018 Score=42.62 Aligned_cols=19 Identities=11% Similarity=0.015 Sum_probs=16.0
Q ss_pred CCCccCCCCccc---------ccccccc
Q psy10229 32 GLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 32 ~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+-.|+|+.|||| .||+++.
T Consensus 39 ~~eLsf~~Gd~i~vl~~~~~~gWw~g~~ 66 (97)
T 2csq_A 39 EEELPFKEGQIIKVYGDKDADGFYRGET 66 (97)
T ss_dssp TTBCCBCTTCEEEEEEEECTTCEEEEEE
T ss_pred CCccCCCCCCEEEEEEecCCCCeEEEEE
Confidence 456799999998 2999986
No 32
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=92.86 E-value=0.043 Score=46.84 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=18.3
Q ss_pred ceEEEECCC---hHHHHHHHHhhCC
Q psy10229 113 RPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
+.|+|+||+ |+||...|.+..+
T Consensus 2 ~li~I~G~~GSGKSTla~~La~~~~ 26 (253)
T 2ze6_A 2 LLHLIYGPTCSGKTDMAIQIAQETG 26 (253)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCcCHHHHHHHHHhcCC
Confidence 368899999 9999999987643
No 33
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=92.49 E-value=0.048 Score=36.83 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=19.3
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|+.|||+ .||+++.
T Consensus 26 alydy~a~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 26 ALYDYQEKSP-REVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp ECSCBCCSST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred EeeeECCCCC-CccCCCCCCEEEEEEecCCCEEEEEe
Confidence 3445555443 35699999999 5999864
No 34
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=92.18 E-value=0.071 Score=45.07 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=52.3
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCC-------CCcchhHHHHHHHHhc-cCceeEEeccCCccchHHHH
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPL-------GKMYDRSMKMEQEFGE-FFTAVVQGDMPEDIYQKVKE 180 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~T-------G~dY~FVe~fe~~i~~-~Fd~iE~g~~~g~~Y~sV~~ 180 (231)
+..|+|+||+ |+|+.++|.+.+.- ...++.++ |.. .-+++.+.+.+ .+ ++..... ..+.+
T Consensus 29 ~~~I~l~G~~GsGKsT~a~~L~~~~g~-~~is~~~~~r~~~~~~~~--~g~~i~~~~~~g~~--~~~~~~~----~~~~~ 99 (243)
T 3tlx_A 29 DGRYIFLGAPGSGKGTQSLNLKKSHCY-CHLSTGDLLREAAEKKTE--LGLKIKNIINEGKL--VDDQMVL----SLVDE 99 (243)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCC-EEEEHHHHHHHHTTSSSH--HHHHHHHHHHTTCC--CCHHHHH----HHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC-eEEecHHHHHHHHhccch--HHHHHHHHHhcCCC--CcHHHHH----HHHHH
Confidence 4458999999 99999999886532 11222111 110 11455555555 55 4432221 22222
Q ss_pred HHHhcCCCCCCCcEEEEEecHHHHHHHHH-------cCCCc-EEEEEcCCC
Q psy10229 181 VIQEQSGPSIWGKHCILDVSGNAIKRLQV-------ASLYP-VAIFIKPKS 223 (231)
Q Consensus 181 v~~~~~~~~~wGk~cILDv~~qgvk~Lr~-------~~~~P-ivIFI~ppS 223 (231)
.+.+ ..-++.+|||..|..+.+.+. .+..| .+|++..|.
T Consensus 100 ~l~~----~~~~~~~ildg~p~~~~q~~~l~~~l~~~~~~~d~vi~l~~p~ 146 (243)
T 3tlx_A 100 KLKT----PQCKKGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPD 146 (243)
T ss_dssp HTTS----GGGSSEEEEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred HHhc----ccccCCEEecCCCCcHHHHHHHHHHHHHcCCCCceEEEEeCCH
Confidence 2221 122788999987777665543 22333 455555554
No 35
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=91.83 E-value=0.11 Score=37.52 Aligned_cols=18 Identities=0% Similarity=-0.186 Sum_probs=15.3
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 35 eLsf~~GDiI~V~~~~~~gWw~G~~~ 60 (83)
T 2ke9_A 35 ALNVRAGDVITVLEQHPDGRWKGHIH 60 (83)
T ss_dssp BCCBCTTCEEEESCSSCSSCEEEEEC
T ss_pred cccccCCCEEEEEEecCCCeEEEEEC
Confidence 4699999999 49999864
No 36
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=91.82 E-value=0.083 Score=36.33 Aligned_cols=27 Identities=19% Similarity=0.302 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.|-.+ -.|+|+.|||+ .||+++.
T Consensus 7 lydy~~~~~-~eLs~~~Gd~i~v~~~~~~gWw~g~~ 41 (65)
T 2fei_A 7 LFEYIPQNE-DELELKVGDIIDINEEVEEGWWSGTL 41 (65)
T ss_dssp SSCCCCCST-TBCCCCTTCEEECCCCSSSSEEEEES
T ss_pred CccCCcCCc-CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 344555443 35699999999 4999974
No 37
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=91.79 E-value=0.13 Score=35.51 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=20.9
Q ss_pred cCCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 21 DRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 21 ~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
-+..+|.|-.+ -.|+|+.|||+ .||+++.
T Consensus 10 ~al~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (71)
T 1hsq_A 10 KALFDYKAQRE-DELTFIKSAIIQNVEKQEGGWWRGDY 46 (71)
T ss_dssp CCSSCCCCSSS-SSCCCCTTCCCBSCCCBTTTEECCBC
T ss_pred EECCCCCcCCC-CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 34555666553 35699999999 4999986
No 38
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=91.61 E-value=0.077 Score=35.62 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 12 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (62)
T 1k4u_S 12 FSYEATQP-EDLEFQEGDIILVLSKVNEEWLEGES 45 (62)
T ss_dssp SCBCCCSS-SBCCBCSSCEEEEEEESSSSCEEEEC
T ss_pred CCCCcCCC-CCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 34444442 34699999999 4999984
No 39
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=91.54 E-value=0.083 Score=37.06 Aligned_cols=26 Identities=15% Similarity=0.121 Sum_probs=18.5
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.+..+ -.|+|+.|||+ .||+++..
T Consensus 18 dy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 51 (76)
T 2ed1_A 18 DCQADND-DELTFIEGEVIIVTGEEDQEWWIGHIE 51 (76)
T ss_dssp CCCCSSS-SBCCCCSSCEEEESSCCSSSEEEEEET
T ss_pred cCCCCCc-CCcCcCCCCEEEEEEecCCCEEEEEEC
Confidence 3444442 34699999999 49999864
No 40
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=91.41 E-value=0.06 Score=35.54 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|++||++ .||+++.
T Consensus 10 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1sem_A 10 DFNPQES-GELAFKRGDVITLINKDDPNWWEGQL 42 (58)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEECSSSSEEEEEE
T ss_pred CCCCCCC-CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 4444442 35699999999 4999986
No 41
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=91.26 E-value=0.084 Score=36.17 Aligned_cols=19 Identities=16% Similarity=0.132 Sum_probs=16.0
Q ss_pred CccCCCCccc--------ccccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~~ 52 (231)
.|+|+.|||+ .||+++..+
T Consensus 23 eLsf~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (68)
T 1tg0_A 23 DLNFEKDQEIIVTSVEDAEWYFGEYQD 49 (68)
T ss_dssp BCCBCTTCEEEEEEECSSSEEEEEEEC
T ss_pred CCCCCCCCEEEEEEecCCCeEEEEECC
Confidence 4699999999 499998764
No 42
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=91.26 E-value=0.13 Score=35.77 Aligned_cols=27 Identities=15% Similarity=0.143 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
.+|.|..+ -.|+|+.|||| .||+++..
T Consensus 14 ydy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 48 (77)
T 2d8j_A 14 FDYQARTA-EDLSFRAGDKLQVLDTSHEGWWLARHL 48 (77)
T ss_dssp SCBCCSSS-SBCCBCTTCCEEEEECCSSSEEEEEEC
T ss_pred cCCCCCCC-CccCCCCCCEEEEEECCCCCeEEEEEC
Confidence 33444442 35699999999 49999876
No 43
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=91.22 E-value=0.079 Score=35.09 Aligned_cols=26 Identities=12% Similarity=0.150 Sum_probs=18.3
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||.++..
T Consensus 8 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 41 (58)
T 1jo8_A 8 DYDAAED-NELTFVENDKIINIEFVDDDWWLGELE 41 (58)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred eECCCCC-CCcccCCCCEEEEEEecCCCcEEEEEC
Confidence 3444432 34699999999 49999865
No 44
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=91.18 E-value=0.082 Score=36.23 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+..+ -.|+|++|||+ +||+++.
T Consensus 11 dy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (65)
T 1b07_A 11 DFNGNDE-EDLPFKKGDILRIRDKPEEQWWNAED 43 (65)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEECSSSSEEEEEC
T ss_pred cCCCCCC-CccCCcCCCEEEEEEecCCCeEEEEE
Confidence 3444432 34699999999 4999984
No 45
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=91.17 E-value=0.15 Score=35.73 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=15.3
Q ss_pred CCccCCCCccc---------cccccccc
Q psy10229 33 LNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 33 ~gl~F~~gdil---------~Wwqa~~~ 51 (231)
-.|+|+.|||+ .||+++..
T Consensus 33 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~~ 60 (78)
T 1k1z_A 33 GFLRLNPGDIVELTKAEAEHNWWEGRNT 60 (78)
T ss_dssp CCCCBCTTCEEEEEECCSSCSCEEEEET
T ss_pred CccCCCCCCEEEEEEcCCCCCeEEEEEC
Confidence 34699999998 49999853
No 46
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=91.09 E-value=0.088 Score=35.87 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=14.5
Q ss_pred ccCCCCccc---------cccccccc
Q psy10229 35 SIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 35 l~F~~gdil---------~Wwqa~~~ 51 (231)
|+|++|||+ .||+++..
T Consensus 25 Lsf~~Gd~i~v~~~~~~~gW~~g~~~ 50 (67)
T 3rnj_A 25 LSFKEGDLITLLVPEARDGWHYGESE 50 (67)
T ss_dssp CCBCTTCEEEECSSSCBTTEEEEEET
T ss_pred ccCCCCCEEEEeeccCCCCCEEEEEC
Confidence 699999998 49999854
No 47
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=91.07 E-value=0.26 Score=38.89 Aligned_cols=24 Identities=8% Similarity=0.297 Sum_probs=19.4
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
..+.|+|.||. |+|+.+.|.+.+.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~La~~l~ 34 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCEKIVQKYG 34 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34678999999 9999999987643
No 48
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=91.02 E-value=0.86 Score=36.10 Aligned_cols=22 Identities=9% Similarity=0.116 Sum_probs=19.2
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.+.|+|.||. |+|+.+.|.+.+
T Consensus 4 ~~~I~l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 4 GALIVFEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHTS
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 4678999998 999999999876
No 49
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.87 E-value=0.1 Score=35.83 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|-. +-.|+|+.||++ .||+++.
T Consensus 14 ~dy~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2dl4_A 14 YKFVPQE-NEDLEMRPGDIITLLEDSNEDWWKGKI 47 (68)
T ss_dssp SCCCCSS-TTBCCCCTTCEEEEEECCCSSEEEEEC
T ss_pred eeECCCC-cCCcCCCCCCEEEEEEeCCCCEEEEEE
Confidence 3444444 235699999999 4999984
No 50
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=90.77 E-value=0.075 Score=35.31 Aligned_cols=18 Identities=17% Similarity=0.261 Sum_probs=15.0
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.||++ .||.++.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 44 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEGGWWEGTH 44 (59)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 35699999999 4999975
No 51
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=90.72 E-value=0.096 Score=35.18 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=18.8
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||+++..
T Consensus 9 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 42 (65)
T 2oaw_A 9 DYQEKSP-REVTMKKGDILTLLNSTNKDWWKVEVK 42 (65)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEECCSSSEEEEEEE
T ss_pred cCCccCC-CCCCCCCCCEEEEEEcCCCCEEEEEEc
Confidence 3444442 35699999999 49999876
No 52
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.72 E-value=0.1 Score=37.00 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+..+|.+..+ -.|+|+.|||| .||+++..
T Consensus 22 Alydy~a~~~-~eLs~~~Gd~i~v~~~~~~Ww~~~~~ 57 (79)
T 2cud_A 22 VLSDYPSPDI-SPPIFRRGEKLRVISDEGGWWKAISL 57 (79)
T ss_dssp ESSCSSCTTT-SCCSSCTTCEEEEEEEETTEEEEEET
T ss_pred EccCCCCCCC-CcCCCCCCCEEEEEecCCCeEEEEEC
Confidence 3344445442 34699999999 59999864
No 53
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=90.70 E-value=0.079 Score=35.01 Aligned_cols=25 Identities=8% Similarity=0.209 Sum_probs=17.9
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.||++ .||.++.
T Consensus 9 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 1uti_A 9 DFEALEE-DELGFRSGEVVEVLDSSNPSWWTGRL 41 (58)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCCCCCc-CCCCCCCCCEEEEEEECCCCEEEEEE
Confidence 4444432 35699999999 4999986
No 54
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=90.59 E-value=0.19 Score=35.19 Aligned_cols=30 Identities=10% Similarity=0.145 Sum_probs=21.4
Q ss_pred ccCCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 20 FDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 20 ~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+-+..+|.+..+ -.|+|+.||++ .||+++.
T Consensus 23 ~~alydy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 60 (77)
T 1awj_A 23 VIALYDYQTNDP-QELALRCDEEYYLLDSSEIHWWRVQD 60 (77)
T ss_dssp CCCCCCBCCCCT-TSCCBCSSSCCSCCCTTSSSBCCCCC
T ss_pred EEECccCCCCCc-CCcCCCCCCEEEEEEecCCCCEEEEE
Confidence 345555666553 35699999999 5999975
No 55
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.56 E-value=0.13 Score=35.46 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=18.5
Q ss_pred CCCCCC-CCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLP-MNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p-~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.| -. +-.|+|+.|||| .||+++.
T Consensus 13 lydy~~~~~-~~eLsf~~Gd~i~v~~~~~~~W~~g~~ 48 (71)
T 2gqi_A 13 ILPYTKVPD-TDEISFLKGDMFIVHNELEDGWMWVTN 48 (71)
T ss_dssp SSCCCCCTT-SSCCCCCTTCBCCCCEECSSSCEEEEC
T ss_pred CcccCCCCC-CCCCCCCCCCEEEEEEecCCCEEEEEE
Confidence 334455 33 234699999999 4999974
No 56
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=90.54 E-value=0.11 Score=36.17 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+|.+.. +-.|+|+.|||+ .||+++..
T Consensus 12 dy~a~~-~~ELsf~~Gd~i~vl~~~~~Ww~~~~~ 44 (67)
T 2b86_A 12 DYTAQQ-DQELDIKKNERLWLLDDSKTWWRVRNA 44 (67)
T ss_dssp CBCCSS-TTSCCBCTTCEEEEEECSSSSCEEECT
T ss_pred eECCCC-CCccccCCCCEEEEEecCCCeEEEEeC
Confidence 344433 235699999999 49999854
No 57
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=90.45 E-value=0.12 Score=34.59 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|-.+ -.|+|++||++ .||+++.
T Consensus 10 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (61)
T 1y0m_A 10 FDYKAQRE-DELTFTKSAIIQNVEKQDGGWWRGDY 43 (61)
T ss_dssp SCBCCCST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCCCcCCC-CCcCCcCCCEEEEEEecCCCEEEEEE
Confidence 34445443 35699999999 4999976
No 58
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=90.40 E-value=0.12 Score=34.75 Aligned_cols=26 Identities=8% Similarity=0.328 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|++||++ .||+++..
T Consensus 13 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 46 (62)
T 1uj0_A 13 DFEAVED-NELTFKHGELITVLDDSDANWWQGENH 46 (62)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred cCCCCCc-CCcCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 3444432 24699999999 49999864
No 59
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=90.39 E-value=0.083 Score=34.98 Aligned_cols=26 Identities=19% Similarity=0.395 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|..+ -.|+|+.||++ .||.++.
T Consensus 10 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 43 (58)
T 1zlm_A 10 YTFEPRTP-DELYFEEGDIIYITDMSDTNWWKGTS 43 (58)
T ss_dssp SCBCCSST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ccCCCCCC-CCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 34444432 34699999999 4999985
No 60
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=90.38 E-value=0.088 Score=34.83 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=14.6
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.||++ .||.++.
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 2bz8_A 17 ELTISVGEIITNIRKEDGGWWEGQI 41 (58)
T ss_dssp BCCBCTTCEEEEEECCTTTEEEEEE
T ss_pred EeeECCCCEEEEEEeCCCCEEEEEE
Confidence 4699999999 4999985
No 61
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=90.36 E-value=0.14 Score=34.99 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=19.1
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~ 52 (231)
+|.|-.+ -.|+|++|||+ .||+++..+
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (70)
T 2ecz_A 15 NFNGDTQ-VEMSFRKGERITLLRQVDENWYEGRIPG 49 (70)
T ss_dssp CCCCCST-TBCCCCTTCBCEEEEEEETTEEEEEETT
T ss_pred cCCCCCc-CCcCCCCCCEEEEEEecCCCeEEEEECC
Confidence 4444442 34699999999 499998753
No 62
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=90.32 E-value=0.088 Score=34.84 Aligned_cols=25 Identities=12% Similarity=0.077 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.||++ .||.++.
T Consensus 10 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1zx6_A 10 QFDPQQD-GDLGLKPGDKVQLLEKLSPEWYKGSC 42 (58)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred eECCCCC-CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 4445442 35699999999 4999985
No 63
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=90.30 E-value=0.089 Score=35.46 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=14.6
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (64)
T 2ak5_A 22 ELSFSKGDVIHVTRVEEGGWWEGTH 46 (64)
T ss_dssp BCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred cccCCCCCEEEEeEecCCCEEEEEE
Confidence 5699999999 4999985
No 64
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=90.25 E-value=0.091 Score=36.05 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.||++ .||.++.
T Consensus 9 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (65)
T 2nwm_A 9 DFQAQSP-KELTLQKGDIVYIHKEVDKNWLEGEH 41 (65)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCTTTCEEEEE
T ss_pred eECCCCc-CccCCcCCCEEEEEEecCCCEEEEEE
Confidence 3444432 34699999999 4999984
No 65
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=90.23 E-value=0.11 Score=35.42 Aligned_cols=25 Identities=12% Similarity=0.151 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+.. +-.|+|++||++ .||+++.
T Consensus 14 dy~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (69)
T 4esr_A 14 DYTANR-SDELTIHRGDIIRVFFKDNEDWWYGSI 46 (69)
T ss_dssp CBCCCS-TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred cCCCCC-cCcCCCCCCCEEEEEEecCCCeEEEEe
Confidence 344444 345799999999 5999975
No 66
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=90.12 E-value=0.044 Score=49.57 Aligned_cols=23 Identities=22% Similarity=0.547 Sum_probs=20.2
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
++.|+|+||+ |++|...|.+..+
T Consensus 5 ~~~i~i~GptGsGKTtla~~La~~l~ 30 (323)
T 3crm_A 5 PPAIFLMGPTAAGKTDLAMALADALP 30 (323)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 4578999999 9999999998866
No 67
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=90.09 E-value=0.093 Score=35.04 Aligned_cols=25 Identities=12% Similarity=0.279 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.||++ .||.++.
T Consensus 12 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~~ 44 (60)
T 1w70_A 12 DFTGNSK-LELNFKAGDVIFLLSRINKDWLEGTV 44 (60)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred cCCcCCC-CCccCCCCCEEEEEEeCCCCeEEEEE
Confidence 3444432 24699999999 4999985
No 68
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=90.06 E-value=0.11 Score=36.61 Aligned_cols=18 Identities=17% Similarity=0.405 Sum_probs=15.0
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||| .||+++..
T Consensus 33 eLsf~~Gd~i~Vl~~~~~gWw~g~~~ 58 (72)
T 2l0a_A 33 ELTFKAGEIITVLDDSDPNWWKGETH 58 (72)
T ss_dssp BCCBCTTCEEEEEEEEETTEEEEECS
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEEC
Confidence 4699999999 49999853
No 69
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=90.05 E-value=0.13 Score=35.11 Aligned_cols=26 Identities=27% Similarity=0.340 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|..+ -.|+|+.|||+ .||.++.
T Consensus 14 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1wi7_A 14 FSYLPQND-DELELKVGDIIEVVGEVEEGWWEGVL 47 (68)
T ss_dssp SCBCCSST-TBCCBCTTCEECCCEEEETTEEEECS
T ss_pred ccCCcCCC-CCccCcCCCEEEEEEcCCCCeEEEEE
Confidence 34445442 34699999999 4999984
No 70
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=90.05 E-value=0.12 Score=34.06 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
.+|.|..+ -.|+|+.||++ .||+++..
T Consensus 8 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 42 (57)
T 1cka_A 8 FDFNGNDE-EDLPFKKGDILRIRDKPEEQWWNAEDS 42 (57)
T ss_dssp SCBCCSST-TBCCBCTTCEEEEEECSSSSEEEEECT
T ss_pred CcCCCCCC-CCCCCCCCCEEEEEEecCCCcEEEEeC
Confidence 34445442 34699999999 49999843
No 71
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=90.02 E-value=0.8 Score=36.67 Aligned_cols=100 Identities=6% Similarity=0.092 Sum_probs=52.7
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCCCCcchhHHHHHHHHhc-cCceeEEeccCCccchHHHHHHHhcCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPLGKMYDRSMKMEQEFGE-FFTAVVQGDMPEDIYQKVKEVIQEQSG 187 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~TG~dY~FVe~fe~~i~~-~Fd~iE~g~~~g~~Y~sV~~v~~~~~~ 187 (231)
.+.|+|+||+ |+|+.+.|.+...-.+ + .+ .++.........-.. .| -+... ...+..+.+.+..
T Consensus 18 ~~~I~l~G~~GsGKSTla~~L~~~lg~~~---i-~~-d~~~~~~~~~~~~~g~~~--~~~~~--~~~~~~l~~~~~~--- 85 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGEAIAEACGYPF---I-EG-DALHPPENIRKMSEGIPL--TDDDR--WPWLAAIGERLAS--- 85 (202)
T ss_dssp SSCEEEECSTTSCHHHHHHHHHHHHTCCE---E-EG-GGGCCHHHHHHHHHTCCC--CHHHH--HHHHHHHHHHHTS---
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCEE---E-eC-CcCcchhhHHHHhcCCCC--Cchhh--HHHHHHHHHHHhc---
Confidence 4579999999 9999999987643111 1 11 111111111111111 22 11000 0112556666666
Q ss_pred CCCCCcEEEEEe---cHHHHHHHHHcCCC-cEEEEEcCCCHHHHh
Q psy10229 188 PSIWGKHCILDV---SGNAIKRLQVASLY-PVAIFIKPKSVESII 228 (231)
Q Consensus 188 ~~~wGk~cILDv---~~qgvk~Lr~~~~~-PivIFI~ppS~e~L~ 228 (231)
|+.+|+|. .......++..... ..+|++.+| .+++.
T Consensus 86 ----~~~vivd~~~~~~~~~~~l~~~~~~~~~vi~l~~~-~e~~~ 125 (202)
T 3t61_A 86 ----REPVVVSCSALKRSYRDKLRESAPGGLAFVFLHGS-ESVLA 125 (202)
T ss_dssp ----SSCCEEECCCCSHHHHHHHHHTSTTCCEEEEEECC-HHHHH
T ss_pred ----CCCEEEECCCCCHHHHHHHHHhcCCCeEEEEEeCC-HHHHH
Confidence 89999995 46666777765433 356777665 44443
No 72
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=90.02 E-value=0.096 Score=34.96 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=14.7
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.||++ .||.++.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (60)
T 2gnc_A 22 ELSFKKGASLLLYHRASEDWWEGRH 46 (60)
T ss_dssp BCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999986
No 73
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=90.02 E-value=0.13 Score=33.93 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|..+ -.|+|++||++ .||.++.
T Consensus 9 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 2vwf_A 9 FDFDPQED-GELGFRRGDFIHVMDNSDPNWWKGAC 42 (58)
T ss_dssp SCBCCCST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ceECCCCc-CCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 34445443 35699999999 4999986
No 74
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=90.01 E-value=0.21 Score=33.91 Aligned_cols=28 Identities=18% Similarity=0.313 Sum_probs=19.5
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.|..+ -.|+|+.||++ .||+++.
T Consensus 13 al~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (67)
T 1aww_A 13 ALYDYMPMNA-NDLQLRKGDEYFILEESNLPWWRARD 48 (67)
T ss_dssp BSSCCCCSSS-SSCCCCSSCEEECCCCCSSSEECCBC
T ss_pred ECccCCCCCC-CCccCCCCCEEEEEEccCCCcEEEEE
Confidence 3444555543 35699999998 4999984
No 75
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=89.96 E-value=0.16 Score=38.81 Aligned_cols=29 Identities=14% Similarity=-0.017 Sum_probs=19.9
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~ 52 (231)
..+|.+-.+ -.|+|++|||+ .||+++..+
T Consensus 11 lydy~a~~~-~ELsf~~Gd~i~vl~~~~~~Ww~g~~~g 47 (108)
T 2rqv_A 11 LYDFKAEKA-DELTTYVGENLFICAHHNCEWFIAKPIG 47 (108)
T ss_dssp SSCCCCCSS-SBCCCCSSEEECCCCEETTTEEEECCSS
T ss_pred CCCcCCCCC-CcCCcCCCCEEEEeEecCCCEEEEEECC
Confidence 334445442 24699999998 599998743
No 76
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=89.90 E-value=0.099 Score=36.17 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=17.9
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 11 dy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (68)
T 2ew3_A 11 DFEPENQ-GELGFKEGDIITLTNQIDENWYEGMI 43 (68)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEEESSSSEEEEEE
T ss_pred eECCCCC-CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 3444432 35699999999 4999985
No 77
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=89.85 E-value=0.12 Score=35.55 Aligned_cols=27 Identities=11% Similarity=0.219 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
.+|.|.. +-.|+|+.||++ .||+++..
T Consensus 22 ~dy~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 56 (73)
T 3h0h_A 22 YDYEAIT-EDDLSFHKGEKFQILNSSEGDWWEARSL 56 (73)
T ss_dssp SCBCCSS-TTBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred ccCCCCC-CCcceEeCCCEEEEEEecCCCeEEEEEC
Confidence 3444544 345699999998 49999874
No 78
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.84 E-value=0.14 Score=35.04 Aligned_cols=25 Identities=20% Similarity=0.429 Sum_probs=17.9
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.|||+ .||+++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2k_A 15 TFEPRTP-DELYFEEGDIIYITDMSDTNWWKGTS 47 (68)
T ss_dssp CCCCCST-TBCCCCSSCEEEEEECSCSSEEEEES
T ss_pred eECCCCC-CcccCCCCCEEEEEEcCCCCEEEEEE
Confidence 4444432 35699999999 4999985
No 79
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=89.79 E-value=0.14 Score=34.90 Aligned_cols=19 Identities=11% Similarity=0.127 Sum_probs=15.8
Q ss_pred CccCCCCccc--------ccccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~~ 52 (231)
.|+|+.||++ .||+++..+
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 48 (67)
T 2o9s_A 22 EMSFRKGERITLLRQVDENWYEGRIPG 48 (67)
T ss_dssp BCCBCTTCEEEEEEECSSSEEEEECTT
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEECC
Confidence 4699999999 499998753
No 80
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=89.64 E-value=0.19 Score=34.87 Aligned_cols=29 Identities=14% Similarity=0.171 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+..+|.+..+ -.|+|+.|||+ .||+++..
T Consensus 12 alydy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 47 (72)
T 2jw4_A 12 AKFDYVAQQE-QELDIKKNERLWLLDDSKSWWRVRNS 47 (72)
T ss_dssp CSSCCCCSST-TSCCCCTTCEEEEEECSSSSEEEECT
T ss_pred ECcCCCcCCC-CcccCCCCCEEEEEECCCCEEEEEEC
Confidence 3444555543 34699999999 49999854
No 81
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=89.58 E-value=0.11 Score=36.21 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|++||++ .||.++.
T Consensus 18 al~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (73)
T 3c0c_A 18 ALYDFEPEND-GELGFREGDLITLTNQIDENWYEGML 53 (73)
T ss_dssp ESSCBCCSST-TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred ECccCCCCCC-CCccCcCCCEEEEEEecCCCEEEEEE
Confidence 4444555443 35699999999 4999975
No 82
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=89.57 E-value=0.16 Score=35.22 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
..+|.|-.+ -.|+|+.|||+ .||.++..
T Consensus 12 lydy~a~~~-~ELs~~~Gd~i~v~~~~~~gWw~g~~~ 47 (65)
T 2lj0_A 12 LYSYIPQND-DELELRDGDIVDVMEKCDDGWFVGTSR 47 (65)
T ss_dssp SSCBCCSST-TBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred ceeECCCCc-CCcCCCCCCEEEEeEeCCCCEEEEEEC
Confidence 344555543 34699999999 49998754
No 83
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=89.55 E-value=0.11 Score=34.95 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=17.2
Q ss_pred CCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
|.+..+ -.|+|+.||++ .||.++.
T Consensus 18 y~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (65)
T 3ulr_B 18 YQAAGD-DEISFDPDDIITNIEMIDDGWWRGVC 49 (65)
T ss_dssp BCCCST-TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ECCCCc-CEeeEecCCEEEEEEecCCCEEEEEE
Confidence 344432 35699999999 4999984
No 84
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=89.48 E-value=0.14 Score=34.23 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
.+|.+..+ -.|+|+.||++ .||+++..
T Consensus 13 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 46 (62)
T 2iim_A 13 HSYEPSHD-GDLGFEKGEQLRILEQSGEWWKAQSL 46 (62)
T ss_dssp SCBCCCST-TBCCBCTTCEEEEEECCSSEEEEEET
T ss_pred ccCCCCCC-CCcCCCCCCEEEEEEcCCCEEEEEEC
Confidence 34444442 35699999999 49999863
No 85
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.40 E-value=0.17 Score=36.48 Aligned_cols=26 Identities=12% Similarity=0.342 Sum_probs=18.3
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.+..+ -.|+|+.|||+ .||+++..
T Consensus 25 dy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 58 (88)
T 1x2q_A 25 DFEAVED-NELTFKHGEIIIVLDDSDANWWKGENH 58 (88)
T ss_dssp CCCCCSS-SCCCCCSSCEEEEEECSCSSSEEEEET
T ss_pred cCCCCCc-CccCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 4444442 34699999999 49999864
No 86
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=89.34 E-value=0.12 Score=34.40 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=17.4
Q ss_pred CCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
|.|.. +-.|+|++||++ .||+++.
T Consensus 15 y~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 46 (62)
T 3ngp_A 15 YQEKS-PRELTVKKGDILTLLNSTNKDWWKIEV 46 (62)
T ss_dssp BCCCS-TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCCC-CCCccCCCCCEEEEeEecCCCeEEEEE
Confidence 44443 235699999998 5999974
No 87
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=89.30 E-value=0.15 Score=34.93 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=16.3
Q ss_pred CCCccCCCCccc--------cccccccc
Q psy10229 32 GLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 32 ~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+-.|+|+.||++ .||+++..
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (69)
T 1ruw_A 17 SSELPLKKGDIVFISRDEPSGWSLAKLL 44 (69)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred CCcccCCCCCEEEEEEecCCCeEEEEEC
Confidence 345699999999 49999865
No 88
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=89.30 E-value=0.33 Score=40.79 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=20.9
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
....|+|.||+ |+|+.++|.+..+.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~~ 52 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLVK 52 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHTT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 45778999999 99999999887653
No 89
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.28 E-value=0.18 Score=34.35 Aligned_cols=25 Identities=12% Similarity=0.259 Sum_probs=17.7
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+-.+ -.|+|+.|||+ .||.++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2p_A 15 DYAATDE-TQLSFLRGEKILILRQTTADWWWGER 47 (68)
T ss_dssp CCCCSST-TBCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred eECCCCc-CCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 3444432 34699999999 4999985
No 90
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=89.20 E-value=1.1 Score=41.08 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=49.9
Q ss_pred CCCCceEEEECCC---hHHHHHHHHhhCCCCcccccCCCCCcchhHHHHHHHHhccCceeEEeccCCccchHHHHHHHhc
Q psy10229 109 IDYARPVIILGPL---KDRINDDLISEFPEQFGSCVPPLGKMYDRSMKMEQEFGEFFTAVVQGDMPEDIYQKVKEVIQEQ 185 (231)
Q Consensus 109 ~~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~TG~dY~FVe~fe~~i~~~Fd~iE~g~~~g~~Y~sV~~v~~~~ 185 (231)
...++.|||+||+ |+|+.++|.+... + ..+. + + .+ + .+ +.+...+.+.+.+
T Consensus 255 ~~~~~lIil~G~pGSGKSTla~~L~~~~~--~-~~i~-~-------D--------~~---~--~~-~~~~~~~~~~l~~- 308 (416)
T 3zvl_A 255 SPNPEVVVAVGFPGAGKSTFIQEHLVSAG--Y-VHVN-R-------D--------TL---G--SW-QRCVSSCQAALRQ- 308 (416)
T ss_dssp CSSCCEEEEESCTTSSHHHHHHHHTGGGT--C-EECC-G-------G--------GS---C--SH-HHHHHHHHHHHHT-
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHhcC--c-EEEc-c-------c--------hH---H--HH-HHHHHHHHHHHhc-
Confidence 4456788999999 9999999987542 1 0111 1 1 11 0 00 1112566677777
Q ss_pred CCCCCCCcEEEEEec---H---HHH-HHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 186 SGPSIWGKHCILDVS---G---NAI-KRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 186 ~~~~~wGk~cILDv~---~---qgv-k~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
|+.+|+|.. . +.+ +.++..+....+||+ .++.+++.+
T Consensus 309 ------g~~vIiD~~~~~~~~r~~~~~~~~~~~~~~~~v~l-~~~~e~l~~ 352 (416)
T 3zvl_A 309 ------GKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNF-CATIEQARH 352 (416)
T ss_dssp ------TCCEEEESCCCSHHHHHHHHHHHHHHTCCEEEEEE-CCCHHHHHH
T ss_pred ------CCcEEEeCCCCCHHHHHHHHHHHHHcCCeEEEEEE-eCCHHHHHH
Confidence 999999943 1 222 223344555566666 455666543
No 91
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=89.14 E-value=0.4 Score=38.81 Aligned_cols=20 Identities=10% Similarity=0.456 Sum_probs=17.4
Q ss_pred EEEECCC---hHHHHHHHHhhCC
Q psy10229 115 VIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~~P 134 (231)
|+|+||+ |+|+.+.|.+.+.
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~~ 25 (216)
T 3dl0_A 3 LVLMGLPGAGKGTQGERIVEKYG 25 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 7889999 9999999988753
No 92
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.93 E-value=0.17 Score=35.79 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=15.0
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 51 (81)
T 2ysq_A 26 ELAFKAGDVIKVLDASNKDWWWGQID 51 (81)
T ss_dssp SCCCCTTCEEEEEECCSSSEEEEECS
T ss_pred cCCCCCCCEEEEEEEcCcCEEEEEEC
Confidence 4699999999 49999853
No 93
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=88.92 E-value=0.17 Score=35.16 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=14.3
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 15 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 39 (73)
T 2kxd_A 15 EVTMKKGDILTLLNSTNKDWWKVEV 39 (73)
T ss_dssp CCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred EeeEcCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999974
No 94
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=88.88 E-value=0.36 Score=35.48 Aligned_cols=19 Identities=5% Similarity=-0.095 Sum_probs=15.9
Q ss_pred CCCccCCCCccc---------ccccccc
Q psy10229 32 GLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 32 ~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+-.|+|+.|||| .||+++.
T Consensus 37 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 64 (96)
T 1wie_A 37 EAELPLTAGKYLYVYGDMDEDGFYEGEL 64 (96)
T ss_dssp TTBCCCCTTCEEEEESSCCSSSCCEEEE
T ss_pred CCeeeECCCCEEEEeEecCCCCEEEEEE
Confidence 456799999998 4999985
No 95
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=88.87 E-value=0.17 Score=33.68 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=17.7
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.||++ .||.++.
T Consensus 13 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (60)
T 2xmf_A 13 AYDAQDT-DELSFNANDIIDIIKEDPSGWWTGRL 45 (60)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCCcCCc-CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 3444432 34699999999 4999986
No 96
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=88.86 E-value=0.25 Score=36.24 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.+..+ -.|+|+.|||| .||+++.
T Consensus 40 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 74 (98)
T 1udl_A 40 MYDYAANNE-DELSFSKGQLINVMNKDDPDWWQGEI 74 (98)
T ss_dssp SSCCCCSST-TSCCCCTTCEEEECBCCSSSEEBCBS
T ss_pred CCCCCCCCC-CccCCcCCCEEEEEEecCCCEEEEEE
Confidence 344445442 35699999999 4999974
No 97
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.84 E-value=0.16 Score=35.60 Aligned_cols=19 Identities=11% Similarity=-0.020 Sum_probs=15.6
Q ss_pred CccCCCCccc--------ccccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~~ 52 (231)
.|+|+.|||+ .||+++...
T Consensus 25 eLs~~~Gd~i~vl~~~~~gWw~g~~~~ 51 (75)
T 2egc_A 25 TAGFQEGVSMEVLERNPNGWWYCQILD 51 (75)
T ss_dssp SCCBCTTCEEEECEECTTSEEEEEECC
T ss_pred cCCCCCCCEEEEEEcCCCCeEEEEeCC
Confidence 3599999999 399998753
No 98
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.83 E-value=0.19 Score=34.39 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCCccCCCCccc-------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~ 50 (231)
..+|.+..+ -.|+|+.||++ .||+++.
T Consensus 13 lydy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~~~~ 46 (68)
T 1wxb_A 13 LYDFTARNA-NELSVLKDEVLEVLEDGRQWWKLRS 46 (68)
T ss_dssp SSCBCCSSS-SBCCBCTTCEEEEEECSSSEEEEEC
T ss_pred CccCCCCCC-CccCCCCCCEEEEEEcCCCEEEEEE
Confidence 334444442 35699999999 5999985
No 99
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=88.80 E-value=0.17 Score=34.76 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=19.3
Q ss_pred CCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
..+|.+..+ -.|+|+.|||+ .||+++..
T Consensus 14 lydy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~~~~~ 48 (68)
T 2k2m_A 14 NYDFQARNS-SELSVKQRDVLEVLDDSRKWWKVRDP 48 (68)
T ss_dssp SSCBCCCSS-SBCCBCTTCEEEEEECSSSEEEEECT
T ss_pred CccCCCCCC-CcccCCCCCEEEEEEcCCCeEEEEeC
Confidence 334444442 35699999999 59999753
No 100
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=88.78 E-value=0.13 Score=34.23 Aligned_cols=25 Identities=12% Similarity=0.206 Sum_probs=17.8
Q ss_pred CCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.||++ .||+++.
T Consensus 13 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~W~~~~~ 46 (63)
T 3eg3_A 13 DFVASGD-NTLSITKGEKLRVLGYNHNGEWCEAQT 46 (63)
T ss_dssp CBCCCSS-SBCCBCTTCEEEEEEECTTSSEEEEEE
T ss_pred eECCCCC-CccCCCCCCEEEEEEeCCCCCeEEEEE
Confidence 3444442 34699999998 3999886
No 101
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=88.75 E-value=0.95 Score=34.58 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=17.9
Q ss_pred eEEEECCC---hHHHHHHHHhhCC
Q psy10229 114 PVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~P 134 (231)
.|+|+||+ |+|+.+.|.+...
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 58899999 9999999987643
No 102
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=88.75 E-value=0.41 Score=37.59 Aligned_cols=22 Identities=14% Similarity=0.289 Sum_probs=18.4
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.+.|+|+||+ |+|+.+.|.+..
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l 29 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 4568999999 999999998753
No 103
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=88.73 E-value=0.21 Score=34.29 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc-------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 16 dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~ 47 (69)
T 1uhf_A 16 PYSSVEP-GDLTFTEGEEILVTQKDGEWWTGSI 47 (69)
T ss_dssp CBCCSSS-SBCCBCTTCEEEECEEETTEEEECS
T ss_pred eECCCCc-CccCCCCCCEEEEEEeCCCEEEEEe
Confidence 3444432 34699999999 5999974
No 104
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=88.72 E-value=0.18 Score=33.35 Aligned_cols=26 Identities=4% Similarity=0.072 Sum_probs=18.2
Q ss_pred CCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||.++..
T Consensus 10 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 44 (60)
T 2v1q_A 10 DFMAESQ-DELTIKSGDKVYILDDKKSKDWWMCQLV 44 (60)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEESSSCSSEEEEEET
T ss_pred eECCCCC-CCccCCCCCEEEEEeCCCCCCCEEEEEC
Confidence 3444443 25699999998 49999863
No 105
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=88.71 E-value=0.17 Score=35.38 Aligned_cols=18 Identities=6% Similarity=-0.326 Sum_probs=14.8
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.|||+ .||+++.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~gWw~g~~ 51 (73)
T 2ebp_A 26 DSLKLKKGDIIDIISKPPMGTWMGLL 51 (73)
T ss_dssp SBCCBCSSCEEEEEECCSSSCEEEEC
T ss_pred CccCCCCCCEEEEEEeCCCCeEEEEE
Confidence 35699999999 4999965
No 106
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=88.70 E-value=0.16 Score=36.51 Aligned_cols=28 Identities=11% Similarity=0.181 Sum_probs=19.8
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+-.+ -.|+|+.|||+ .||.++.
T Consensus 23 Alydy~a~~~-~eLsf~~Gd~I~Vl~~~~~gWw~g~~ 58 (79)
T 1z9q_A 23 ALFDFTGNSK-LELNFKAGDVIFLLSRINKDWLEGTV 58 (79)
T ss_dssp ESSCCCCSST-TBCCCCTTCCBCCCEESSSSEEEEEE
T ss_pred EcCccCCCCC-CcccccCCCEEEEeEecCCCEEEEEE
Confidence 4445555443 35699999999 4999984
No 107
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=88.69 E-value=0.18 Score=33.14 Aligned_cols=17 Identities=12% Similarity=0.222 Sum_probs=14.6
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++||++ .||+++.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (58)
T 2drm_A 19 ELTFKEGDTIIVHQKDPAGWWEGEL 43 (58)
T ss_dssp BCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999986
No 108
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=88.68 E-value=0.17 Score=34.52 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
.+|.|..+ -.|+|+.||++ .||+++..
T Consensus 9 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 43 (67)
T 1gl5_A 9 YDFQATEA-HDLRLERGQEYIILEKNDLHWWRARDK 43 (67)
T ss_dssp SCBCCSSS-SBCCBCTTCEEEEEECSSSSEEEEECS
T ss_pred ccCCCCCC-CeecCCcCCEEEEEEccCCCcEEEEEC
Confidence 34445442 35699999999 49999843
No 109
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=88.57 E-value=0.18 Score=34.53 Aligned_cols=18 Identities=11% Similarity=0.208 Sum_probs=15.0
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~g~~~ 52 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEAEHNWWEGRNT 52 (70)
T ss_dssp BCCBCTTCEEEEEECCTTCSEEEEEET
T ss_pred cCCcCCCCEEEEEeCCCCCCCeEEEeC
Confidence 5699999998 49999743
No 110
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=88.48 E-value=0.19 Score=33.40 Aligned_cols=27 Identities=11% Similarity=0.248 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
.+|.|..+ -.|+|+.||++ .||+++..
T Consensus 8 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~~~~~ 41 (60)
T 1i07_A 8 YDFVARNS-SELSVMKDDVLEILDDRRQWWKVRNA 41 (60)
T ss_dssp SCBCCSST-TBCCBCTTCEEEECGGGCCEEEEECT
T ss_pred ccCCCCCC-CcccCCCCCEEEEEEcCCCeEEEEEC
Confidence 34445443 35699999998 59999754
No 111
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=88.44 E-value=0.13 Score=35.19 Aligned_cols=17 Identities=0% Similarity=-0.117 Sum_probs=14.4
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||+++.
T Consensus 24 eLs~~~Gd~i~v~~~~~~gWw~g~~ 48 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSGQWEGEC 48 (67)
T ss_dssp BCCBCSSEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCCEEEEEEecCCCEEEEEE
Confidence 5699999999 4999954
No 112
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=88.43 E-value=0.14 Score=34.18 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=14.8
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.||++ .||+++.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 47 (65)
T 3u23_A 22 DELELKVGDIIDINEEVEEGWWSGTL 47 (65)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 34699999998 4999984
No 113
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=88.34 E-value=0.13 Score=36.48 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=14.4
Q ss_pred CccCCCCccc--------c-cccccc
Q psy10229 34 NSIFSFPPIL--------E-WHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~-Wwqa~~ 50 (231)
.|+|+.|||+ . ||.++.
T Consensus 26 eLsf~~Gd~i~v~~~~~~~gWw~g~~ 51 (80)
T 2i0n_A 26 LLPFKRNDIITITFKDQENKWFMGQL 51 (80)
T ss_dssp SCCBCSSEEEEEEEESSSSSEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCCEEEEEE
Confidence 4699999999 4 999974
No 114
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=88.32 E-value=0.18 Score=35.00 Aligned_cols=28 Identities=7% Similarity=0.069 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+..+|.|-.+ -.|+|+.|||+ .||+++.
T Consensus 15 alydy~~~~~-~eLsf~~Gd~i~v~~~~~~~~Ww~g~~ 51 (72)
T 1ugv_A 15 ALYACKAEHD-SELSFTAGTVFDNVHPSQEPGWLEGTL 51 (72)
T ss_dssp ESSCBCCCSS-SBCCBCTTCEEBSCCBCSSTTEEEEES
T ss_pred EccccCCcCC-CEeCCcCCCEEEEEEecCCCCeEEEEE
Confidence 3344445442 34699999998 4999874
No 115
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=88.29 E-value=0.18 Score=35.25 Aligned_cols=17 Identities=12% Similarity=0.143 Sum_probs=14.6
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||+++.
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (76)
T 1ujy_A 26 ELSVCKGDIIYVTRVEEGGWWEGTL 50 (76)
T ss_dssp SCCBCSSCCEEESSCCSSSCEEEEE
T ss_pred cccCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999985
No 116
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=88.28 E-value=0.21 Score=34.14 Aligned_cols=18 Identities=11% Similarity=0.265 Sum_probs=15.0
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||.++..
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 48 (69)
T 2eqi_A 23 ELTFCRGALIHNVSKEPGGWWKGDYG 48 (69)
T ss_dssp CCCBCTTCEEESCCCCSSSCEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCeEEEEEC
Confidence 4699999999 49999854
No 117
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=88.27 E-value=0.15 Score=35.27 Aligned_cols=17 Identities=18% Similarity=0.190 Sum_probs=14.6
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++|||| .||.++.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (73)
T 2dbm_A 23 ELGFKEGDIITLTNQIDENWYEGML 47 (73)
T ss_dssp CCCBCTTCEEECCBCSSSSEEEEEE
T ss_pred CccCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999975
No 118
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=88.06 E-value=0.19 Score=34.17 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=14.4
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++||++ .||.++.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~W~~g~~ 47 (68)
T 2dl3_A 23 ELPLQKGDIVYIYKQIDQNWYEGEH 47 (68)
T ss_dssp BCCBCTTCEEEEEECCSTTEEEEEC
T ss_pred CccCCCCCEEEEeEecCCCEEEEEE
Confidence 4699999999 4999984
No 119
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=88.05 E-value=0.21 Score=32.84 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=17.8
Q ss_pred CCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
|.|..+ -.|+|+.||++ .||+++..
T Consensus 10 ~~~~~~-~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (59)
T 1yn8_A 10 FEPEND-NELRLAEGDIVFISYKHGQGWLVAENE 42 (59)
T ss_dssp BCCCST-TBCCBCTTCEEEEEEEEETTEEEEECT
T ss_pred CCCCCC-CCcCCCCCCEEEEEEcCCCCeEEEEEC
Confidence 344432 34699999999 39999865
No 120
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=88.05 E-value=0.21 Score=33.28 Aligned_cols=25 Identities=12% Similarity=0.134 Sum_probs=17.9
Q ss_pred CCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
|.|..+ -.|+|++||++ .||+++..
T Consensus 15 y~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 47 (64)
T 4f14_A 15 YSAQDE-DEVSFRDGDYIVNVQPIDDGWMYGTVQ 47 (64)
T ss_dssp BCCCST-TBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred eCCcCC-CcCCCCCCCEEEEEEeCCCCeEEEEEC
Confidence 444432 34699999998 49999874
No 121
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.96 E-value=0.28 Score=33.55 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|+.||++ .||.++.
T Consensus 13 al~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (70)
T 2ega_A 13 VVSNYKKQEN-SELSLQAGEVVDVIEKNESGWWFVST 48 (70)
T ss_dssp CCSCCCCCSS-SSCCCCTTCBCEEEEECTTSEEEEEC
T ss_pred ECceECCCCC-CcccCCCCCEEEEEEccCCCeEEEEE
Confidence 3444555442 34699999999 4999975
No 122
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=87.90 E-value=0.17 Score=33.14 Aligned_cols=23 Identities=9% Similarity=0.160 Sum_probs=16.2
Q ss_pred CCCCCCCCCccCCCCccc--------cccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRK 49 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~ 49 (231)
|.|..+ -.|+|+.||++ .||++.
T Consensus 10 y~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~ 40 (58)
T 4e6r_A 10 YVAERE-DELSLVXGSRVTVMEXCSDGWWRGS 40 (58)
T ss_dssp BCCCST-TBCCBCTTCEEEEEEECTTSEEEEE
T ss_pred CCCCCC-CEeeEeCCCEEEEeEcCCCCEEEEE
Confidence 344432 34699999998 499994
No 123
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=87.90 E-value=0.2 Score=34.19 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+..+ -.|+|++||++ .||.++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2djq_A 15 NYRGKNP-GDLKFNKGDVILLRRQLDENWYQGEI 47 (68)
T ss_dssp CCCSCCT-TCCCCCTTCEEEEEECCCSSEEEEEE
T ss_pred CCCCCCc-CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 3444432 24699999999 4999984
No 124
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=87.81 E-value=1.5 Score=34.24 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=18.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
+..|+|.||+ |+|+.+.|.+..
T Consensus 5 ~~~I~l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 5 PALIIVTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHc
Confidence 4678999999 999999998754
No 125
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=87.79 E-value=0.21 Score=33.38 Aligned_cols=26 Identities=12% Similarity=0.146 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|..+ -.|+|+.|||+ .||+++.
T Consensus 10 ~~y~~~~~-~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (62)
T 2fpe_A 10 FRFVPRHE-DELELEVDDPLLVELQAEDYWYEAYN 43 (62)
T ss_dssp SCBCCSST-TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred ccCCccCc-CcCcCCCCCEEEEEEecCCCEEEEEE
Confidence 34455442 34699999999 4999974
No 126
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=87.71 E-value=0.23 Score=34.84 Aligned_cols=28 Identities=14% Similarity=0.476 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCccCCCCccc-------------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------------~Wwqa~~ 50 (231)
..+|.+..++..|+|++|||| .||.++.
T Consensus 20 lydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~ 60 (80)
T 2v1r_A 20 LYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (80)
T ss_dssp SSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEC
T ss_pred CccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEe
Confidence 334445443336799999998 2999986
No 127
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=87.69 E-value=0.23 Score=34.09 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=15.1
Q ss_pred CccCCCCccc-------cccccccc
Q psy10229 34 NSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil-------~Wwqa~~~ 51 (231)
.|+|++|||+ .||+++..
T Consensus 23 eLsf~~Gd~i~v~~~~~~Ww~g~~~ 47 (70)
T 2vkn_A 23 EISFEQNEILQVSDIEGRWWKARRA 47 (70)
T ss_dssp BCCBCTTCEEEEECTTSSEEEEECT
T ss_pred cccCCCCCEEEEEEcCCCeEEEEEC
Confidence 5699999999 49999754
No 128
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=87.68 E-value=0.2 Score=35.58 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=19.8
Q ss_pred CCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
..+|.+.. +-.|+|+.||++ .||.++..
T Consensus 11 lydy~~~~-~~eLs~~~Gd~i~vl~~~~~~Ww~g~~~ 46 (79)
T 3cqt_A 11 LYDYEART-EDDLSFHKGEKFQILNSSEGDWWEARSL 46 (79)
T ss_dssp SSCBCCCS-TTBCCBCTTCEEEEEECTTSSEEEEEET
T ss_pred CccCCCCC-cCcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 34445544 235699999999 49999874
No 129
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=87.68 E-value=0.17 Score=33.90 Aligned_cols=25 Identities=12% Similarity=0.206 Sum_probs=17.4
Q ss_pred CCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 9 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 42 (62)
T 2j6f_A 9 DYDAVHD-DELTIRVGEIIRNVKKLQEEGWLEGEL 42 (62)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEEECSSTTEEEEEE
T ss_pred cCCcCCc-CCcCCcCCCEEEEEEecCCCCEEEEEE
Confidence 3444432 34699999998 4999984
No 130
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.65 E-value=0.24 Score=35.80 Aligned_cols=26 Identities=8% Similarity=0.114 Sum_probs=18.5
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.+.. +-.|+|+.|||| .||.++..
T Consensus 25 dy~~~~-~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 58 (90)
T 2yup_A 25 TFKGDL-EVELSFRKGEHICLIRKVNENWYEGRIT 58 (90)
T ss_dssp CCCCCS-SSBCCCCTTCEEEESSCCCSSEEEEECT
T ss_pred cCCcCC-cCcCCCCCCCEEEEEEEcCCCeEEEEEC
Confidence 344443 234699999999 49999864
No 131
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.64 E-value=0.19 Score=34.39 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 13 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2dmo_A 13 LFGFVPETK-EELQVMPGNIVFVLKKGNDNWATVMF 47 (68)
T ss_dssp CSSCCCCSS-SSCCCCTTCEEEECEECSSSCEEEEE
T ss_pred CcCCCcCCc-CCCCCCCCCEEEEEEeCCCCEEEEEe
Confidence 334455443 24699999999 4998854
No 132
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.63 E-value=0.19 Score=35.38 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 24 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 57 (79)
T 1x69_A 24 YDYQAAGD-DEISFDPDDIITNIEMIDDGWWRGVC 57 (79)
T ss_dssp SCCCCSSS-SBCCCCTTCEEEEEEECSSSEEEEEE
T ss_pred ccCCCCCC-CCcCcCCCCEEEEeEecCCCeEEEEE
Confidence 34444442 34699999999 4999984
No 133
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=87.63 E-value=1.5 Score=35.24 Aligned_cols=19 Identities=16% Similarity=0.555 Sum_probs=16.7
Q ss_pred EEEECCC---hHHHHHHHHhhC
Q psy10229 115 VIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~~ 133 (231)
|+|+||+ |+|+.+.|.+.+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQAEQIIEKY 24 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7889999 999999998765
No 134
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=87.59 E-value=0.22 Score=32.64 Aligned_cols=18 Identities=11% Similarity=0.102 Sum_probs=15.3
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 17 eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 4699999999 39999865
No 135
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=87.56 E-value=0.18 Score=34.46 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=14.5
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++||++ .||+++.
T Consensus 29 eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (72)
T 4glm_A 29 ELDFEVGDKIRILATLEDGWLEGSL 53 (72)
T ss_dssp BCCBCTTCEEEEEEECSTTEEEEEE
T ss_pred cCCCCCCCEEEEEEccCCCEEEEEE
Confidence 4699999998 4999984
No 136
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=87.55 E-value=0.18 Score=35.75 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=14.8
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (80)
T 2pqh_A 18 EVTMKKGDILTLLNSTNKDWWKVEV 42 (80)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEE
Confidence 5699999999 4999986
No 137
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.31 E-value=0.23 Score=34.35 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=14.7
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++|||+ .||.++.
T Consensus 25 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (72)
T 2dl8_A 25 ELSFKKGASLLLYQRASDDWWEGRH 49 (72)
T ss_dssp BCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred EeccCCCCEEEEEeecCCCEEEEEE
Confidence 4699999999 4999986
No 138
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.28 E-value=0.22 Score=35.91 Aligned_cols=17 Identities=6% Similarity=-0.076 Sum_probs=14.2
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||+++.
T Consensus 34 eLsf~~Gd~i~v~~~~~~~Ww~g~~ 58 (88)
T 2dbk_A 34 ALALEVGDIVKVTRMNINGQWEGEV 58 (88)
T ss_dssp BCCBCTTCEEEEEEECTTSCEEEEC
T ss_pred cccCCCCCEEEEEEecCCCEEEEEe
Confidence 4699999999 4999854
No 139
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.25 E-value=0.28 Score=33.60 Aligned_cols=28 Identities=11% Similarity=0.033 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
..+|.+..+ -.|+|+.|||+ .||.++..
T Consensus 14 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (71)
T 2dnu_A 14 VQPYTSQSK-DEIGFEKGVTVEVIRKNLEGWWYIRYL 49 (71)
T ss_dssp SSCBCCSST-TBCCBCTTCEEEECCCCSSSEEEEEET
T ss_pred CCccCCCCC-CCCcCCCCCEEEEeECCCCCeEEEEEC
Confidence 334444442 34699999999 49999865
No 140
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=87.22 E-value=0.27 Score=34.50 Aligned_cols=18 Identities=6% Similarity=0.208 Sum_probs=15.4
Q ss_pred CccCCCCccc--------cccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||.++..
T Consensus 23 eLs~~~Gd~i~v~~~~~~gWw~g~~~ 48 (80)
T 1ue9_A 23 QLSLAPGQLILILKKNTSGWWQGELQ 48 (80)
T ss_dssp BCCCCTTCEEEEEEECSSSEEEEEEC
T ss_pred CCCCCCCCEEEEEEecCCCcEEEEEC
Confidence 4699999999 49999875
No 141
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=87.20 E-value=0.26 Score=33.90 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=17.2
Q ss_pred CCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
|.+.. +-.|+|+.|||+ .||+++.
T Consensus 14 y~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (73)
T 3thk_A 14 YQEKS-PREVTMKKGDILTLLNSTNKDWWKVEV 45 (73)
T ss_dssp BCCCS-TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCC-CCccCCCCCCEEEEEECCCCCeEEEEE
Confidence 34433 234699999999 4999974
No 142
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=87.17 E-value=0.24 Score=33.99 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=17.4
Q ss_pred CCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.||++ .||+++.
T Consensus 19 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 52 (71)
T 1csk_A 19 NFHGTAE-QDLPFCKGDVLTIVAVTKDPNWYKAKN 52 (71)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEEECSSTTEEEEEC
T ss_pred eECcCCC-CcCCCCCCCEEEEeECCCCCCCEEEEe
Confidence 3344432 34699999998 4999984
No 143
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=87.16 E-value=0.15 Score=34.76 Aligned_cols=18 Identities=6% Similarity=-0.095 Sum_probs=14.6
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.|||+ .||.++.
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (67)
T 2bzy_A 18 TALALEVGDIVKVTRMNINGQWEGEV 43 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CccccCCCCEEEEEEecCCCeEEEEe
Confidence 35699999999 4999854
No 144
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=87.15 E-value=0.24 Score=34.62 Aligned_cols=26 Identities=15% Similarity=0.238 Sum_probs=18.3
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.+-.+ -.|+|+.||++ .||+++..
T Consensus 13 dy~a~~~-~eLs~~~Gd~i~v~~~~~~gWw~g~~~ 46 (73)
T 2lcs_A 13 DFEPEND-NELRLAEGDIVFISYKHGQGWLVAENE 46 (73)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEEEETTTEEEEECT
T ss_pred cCCCCCC-CccCCcCCCEEEEEEEcCCCEEEEEEC
Confidence 3444432 34699999999 39999864
No 145
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=87.04 E-value=0.23 Score=32.83 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=14.5
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|++||++ .||.++..
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~W~~g~~~ 45 (60)
T 2x3w_D 19 ELSFKAGDELTKLGEEDEQGWCRGRLD 45 (60)
T ss_dssp BCCBCTTCEEEECSCCCSSSEEEEECS
T ss_pred cccCCCCCEEEEEEccCCCCceEEEeC
Confidence 5699999998 39998743
No 146
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=87.04 E-value=0.25 Score=33.40 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=18.4
Q ss_pred CCCCCC-CCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLP-MNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p-~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.| .. +-.|+|+.|||+ .||.++.
T Consensus 11 lydy~~~~~-~~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (65)
T 2j05_A 11 ILPYTKVPD-TDEISFLKGDMFIVHNELEDGWMWVTN 46 (65)
T ss_dssp SSCBCCCTT-SSBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred ccccCCCCC-CCcCcCCCCCEEEEeEecCCCEEEEEE
Confidence 334445 33 235699999999 4999974
No 147
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=87.03 E-value=0.22 Score=40.10 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=19.7
Q ss_pred CCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
.+|.+.. +-.|+|++|||| +||+++..
T Consensus 19 ydy~~~~-~~eLs~~~Gd~i~v~~~~~~Ww~~~~~ 52 (175)
T 4d8k_A 19 HSYEPSH-DGDLGFEKGEQLRILEQSGEWWKAQSL 52 (175)
T ss_dssp SCBCCCS-SSBCCBCTTCEEEEEECCSSEEEEEET
T ss_pred cCcCCcC-CcccccccCCEEEEEccCCCEEEEEEC
Confidence 3444544 345699999999 59999974
No 148
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=87.01 E-value=0.19 Score=33.70 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
.+|.+..+ -.|+|+.||++ .||.++.
T Consensus 13 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 48 (64)
T 2jte_A 13 FPYTGTNE-DELTFREGEIIHLISKETGEAGWWKGEL 48 (64)
T ss_dssp SCBCCSSS-SBCCBCTTCEEEEEESCSSSTTEEEEEE
T ss_pred ccCCccCC-CccCCCCCCEEEEEECCCCCCCEEEEEE
Confidence 34445442 35699999998 3999974
No 149
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.01 E-value=0.23 Score=34.85 Aligned_cols=17 Identities=12% Similarity=0.057 Sum_probs=14.5
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (79)
T 2yun_A 23 ELNLEKGDIVIIHEKKEEGWWFGSL 47 (79)
T ss_dssp BCCBCTTCEEEEEECCSSSCEEEES
T ss_pred CcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 4699999999 4999984
No 150
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.81 E-value=0.24 Score=35.44 Aligned_cols=28 Identities=11% Similarity=0.169 Sum_probs=19.7
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|+.||+| .||+++.
T Consensus 24 alydy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 59 (85)
T 2yuq_A 24 ALYDYQTNDP-QELALRRNEEYCLLDSSEIHWWRVQD 59 (85)
T ss_dssp ESSCCCCSCS-SBCCCCBTEEEEEEECCSSSEEEEEC
T ss_pred ECcCCCCCCC-CcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 3445555442 35699999999 5999975
No 151
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.79 E-value=0.2 Score=35.31 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+.. +-.|+|++|||| .||.++.
T Consensus 25 dy~~~~-~~eLsf~~Gd~i~v~~~~~~gWw~g~~ 57 (78)
T 2ed0_A 25 DYTKDK-EDELSFQEGAIIYVIKKNDDGWYEGVM 57 (78)
T ss_dssp CBCCSS-TTBCCBCSSCEEEEEEECSSSEEEEEE
T ss_pred cCCccC-cCcccccCCCEEEEEEeCCCCEEEEEE
Confidence 344443 235699999999 4999984
No 152
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=86.77 E-value=0.2 Score=35.09 Aligned_cols=17 Identities=12% Similarity=-0.068 Sum_probs=14.3
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (78)
T 2yuo_A 23 ELGFRKNDIITIISQKDEHCWVGEL 47 (78)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CccCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999874
No 153
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=86.75 E-value=0.26 Score=33.66 Aligned_cols=17 Identities=18% Similarity=0.118 Sum_probs=14.7
Q ss_pred CccCCCCccc-------ccccccc
Q psy10229 34 NSIFSFPPIL-------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil-------~Wwqa~~ 50 (231)
.|+|+.||++ .||+++.
T Consensus 23 eLs~~~Gd~i~v~~~~~~Ww~~~~ 46 (68)
T 1wxt_A 23 ELTVVQGEKLEVLDHSKRWWLVKN 46 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEEEEC
T ss_pred cCCCCCCCEEEEEEcCCCEEEEEE
Confidence 5699999999 4999985
No 154
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=86.74 E-value=0.31 Score=33.25 Aligned_cols=26 Identities=27% Similarity=0.364 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|..+ -.|+|+.|||+ .||.++.
T Consensus 15 ~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (69)
T 2dil_A 15 YDYTAQNP-DELDLSAGDILEVILEGEDGWWTVER 48 (69)
T ss_dssp SCBCCSSS-SSCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ccCCccCc-CccCCCCCCEEEEEECCCCCEEEEEE
Confidence 34444442 24699999999 4999986
No 155
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=86.72 E-value=0.37 Score=37.08 Aligned_cols=26 Identities=19% Similarity=0.038 Sum_probs=18.2
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.+-.+ -.|+|+.|||+ .||+++..
T Consensus 11 dy~a~~~-~ELsf~~Gd~i~vl~~~~~~Ww~g~~~ 44 (120)
T 2kym_A 11 EFKAERD-DELDVSPGENLSICAHYDYEWFIAKPI 44 (120)
T ss_dssp CBCCCST-TCCCBCTTCEEEEEEEETTTEEEEEES
T ss_pred cCCCCCC-CccCCCCCCEEEEEEecCCCEEEEEEC
Confidence 3344432 24699999999 49999863
No 156
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=86.60 E-value=0.28 Score=32.13 Aligned_cols=26 Identities=8% Similarity=0.180 Sum_probs=18.2
Q ss_pred CCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||+++..
T Consensus 9 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~W~~g~~~ 43 (58)
T 1zuu_A 9 AYVQKDD-DEITITPGDKISLVARDTGSGWTKINND 43 (58)
T ss_dssp CBCCCST-TBCCBCTTCCEEEEECCSSSSEEEEEET
T ss_pred eECCcCC-CcccCCCCCEEEEeEcCCCCCCEEEEEC
Confidence 3444442 35699999998 49999864
No 157
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=86.56 E-value=0.24 Score=33.67 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.|||+ .||.++.
T Consensus 18 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (68)
T 1s1n_A 18 DFTAQQV-GDLTFKKGEILLVIEKKPDGWWIAKD 50 (68)
T ss_dssp CBCCSSS-SCCCBCSSEEEEECSCCSSSEEEEEC
T ss_pred cCCCCCC-CcCCCCCCCEEEEEEcCCCCeEEEEE
Confidence 3344432 34699999999 4999985
No 158
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=86.55 E-value=0.26 Score=36.28 Aligned_cols=26 Identities=27% Similarity=0.340 Sum_probs=18.4
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 25 ydy~a~~~-~eLsf~~Gd~i~V~~~~~~gWw~g~~ 58 (92)
T 2o2o_A 25 FSYLPQND-DELELKVGDIIEVVGEVEEGWWEGVL 58 (92)
T ss_dssp SCBCCCSS-SCCCBCSSCEEECCCGGGSSCBCCEE
T ss_pred cccCCCCC-ccccccCCCEEEEeEecCCCEEEEEE
Confidence 34445443 34699999999 4999985
No 159
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=86.53 E-value=0.34 Score=33.21 Aligned_cols=27 Identities=7% Similarity=0.080 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
.+|.+..+ -.|+|+.||++ .||+++..
T Consensus 17 ydy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 50 (72)
T 2kgt_A 17 WDFKSRTD-EELSFRAGDVFHVARKEEQWWWATLL 50 (72)
T ss_dssp TTCBCSST-TSCBCCTTCCEEEEEECSSCEEEEEE
T ss_pred ccCCCCCc-CCcCCCCCCEEEEeeCCCCEEEEEEc
Confidence 34444442 34699999998 49999875
No 160
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=86.46 E-value=0.29 Score=32.88 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=18.2
Q ss_pred CCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||+++..
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 47 (65)
T 1w1f_A 15 PYDGIHP-DDLSFKKGEKMKVLEEHGEWWKAKSL 47 (65)
T ss_dssp CBCCCSS-SCCCBCTTCEEEEEEECSSEEEEEET
T ss_pred eECCcCC-CcCCCCCCCEEEEEEcCCCEEEEEEC
Confidence 3444432 24699999999 49999873
No 161
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=86.39 E-value=0.23 Score=34.44 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
.+|.|-.+ -.|+|+.|||+ .||+++.
T Consensus 9 ydy~a~~~-~eLs~~~Gd~i~vl~~~~~~~gWw~g~~ 44 (69)
T 2ydl_A 9 FPYEAQND-DELTIKEGDIVTLINKDCIDVGWWEGEL 44 (69)
T ss_dssp SCBCCCST-TBCCBCTTCEEEEEESCCSSTTEEEEEE
T ss_pred ccCCCCCC-CccccCCCCEEEEEEcCCCCCCEEEEEE
Confidence 34444442 35699999998 3999985
No 162
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=86.35 E-value=0.36 Score=33.51 Aligned_cols=25 Identities=20% Similarity=0.212 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc-------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.|||+ .||.++.
T Consensus 18 dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~ 49 (74)
T 1j3t_A 18 SWTAKKD-NHLNFSKHDIITVLEQQENWWFGEV 49 (74)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEEECSSEEEEES
T ss_pred CCCCCCC-CccCCCCCCEEEEEecCCCEEEEEE
Confidence 3344432 24699999999 4999985
No 163
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=86.26 E-value=0.77 Score=38.66 Aligned_cols=24 Identities=21% Similarity=0.220 Sum_probs=19.9
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
.+..|+|+||+ |+|+.+.|....+
T Consensus 31 ~~~~i~l~G~~GsGKSTla~~L~~~l~ 57 (253)
T 2p5t_B 31 QPIAILLGGQSGAGKTTIHRIKQKEFQ 57 (253)
T ss_dssp SCEEEEEESCGGGTTHHHHHHHHHHTT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 34568899999 9999999988764
No 164
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=86.24 E-value=0.16 Score=34.40 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=14.3
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||+++.
T Consensus 5 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 29 (63)
T 1tuc_A 5 EVTMKKGDILTLLNSTNKDWWKVEV 29 (63)
T ss_dssp CCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999963
No 165
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.17 E-value=0.29 Score=34.77 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
.+|.+..+ -.|+|++|||| .||+++.
T Consensus 24 ydy~~~~~-~eLsf~~Gd~i~v~~~~~~~~Ww~g~~ 58 (81)
T 1x6g_A 24 CEHTRPKP-GELAFRKGDVVTILEACENKSWYRVKH 58 (81)
T ss_dssp SCBSSCCT-TCCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCCCcCCC-CCCCCCCCCEEEEEeccCCCCeEEEEe
Confidence 34444442 24699999999 3999974
No 166
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=86.15 E-value=0.35 Score=31.32 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=17.8
Q ss_pred CCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
+|.|..+ -.|+|+.|||+ .||.++.
T Consensus 8 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 41 (54)
T 2a28_A 8 AYEAQGD-DEISIDPGDIITVIRGDDGSGWTYGEC 41 (54)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred cCCcCCC-CCccCCCCCEEEEEEecCCCCEEEEEE
Confidence 4444442 34699999998 3999886
No 167
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=86.12 E-value=0.27 Score=39.59 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.|.. +-.|+|++|||+ +||+++.
T Consensus 123 alydy~~~~-~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 158 (174)
T 3qwx_X 123 GTFKFTGER-ETDLPFEQGERLEILSKTNQDWWEARN 158 (174)
T ss_dssp ESSCBCCSS-TTBCCBCTTCEEEEEECCSSSEEEEEC
T ss_pred EecCcccCC-CCccccccCCEEEEEEccCCCeEEEEE
Confidence 334444544 346799999999 4999985
No 168
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=86.10 E-value=0.34 Score=35.97 Aligned_cols=29 Identities=10% Similarity=0.135 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+..+|.+.. +-.|+|+.|||| .||+++..
T Consensus 32 al~dy~~~~-~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 68 (109)
T 2yt6_A 32 ALYDYEART-TEDLSFKKGERFQIINNTEGDWWEARSI 68 (109)
T ss_dssp ESSCCCCSS-TTSCCCCTTCEEEEEECSCTTCEEEEES
T ss_pred ECccCCCCC-CCccCCCCCCEEEEEEccCCCcEEEEEC
Confidence 344455544 245699999999 49999863
No 169
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=86.07 E-value=0.34 Score=34.45 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
..+|.+..+ -.|+|++||++ .||+++..
T Consensus 31 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 65 (86)
T 2oi3_A 31 LYDYEAIHH-EDLSFQKGDQMVVLEESGEWWKARSL 65 (86)
T ss_dssp SSCCCCSSS-SCCCCCTTCEEEEEEESSSEEEEEET
T ss_pred CccCCCCCC-CcCcCCCCCEEEEEEcCCCeEEEEEC
Confidence 334444442 24699999999 49999874
No 170
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=86.05 E-value=0.27 Score=35.53 Aligned_cols=26 Identities=15% Similarity=0.557 Sum_probs=18.3
Q ss_pred CCCCCCCCCCccCCCCccc-------------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------------~Wwqa~~ 50 (231)
+|.+..++..|+|+.|||+ .||+++.
T Consensus 22 dy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~ 60 (92)
T 1jqq_A 22 DFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (92)
T ss_dssp BBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEe
Confidence 3344443336799999998 2999986
No 171
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=85.91 E-value=0.36 Score=32.88 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.|-.+ -.|+|+.||++ .||.++.
T Consensus 12 al~~y~~~~~-~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (70)
T 2cuc_A 12 ALHTYSAHRP-EELDLQKGEGIRVLGKYQDGWLKGLS 47 (70)
T ss_dssp CCSCBCCCST-TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred ECeeECcCCC-CcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 3344445442 34699999999 4999984
No 172
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=85.83 E-value=0.31 Score=33.04 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=15.1
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||.++..
T Consensus 23 eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 49 (67)
T 2kxc_A 23 LLSFAQGDVITLLIPEEKDGWLYGEHD 49 (67)
T ss_dssp BCCBCTTCEEEESSSSCBTTEEEEEES
T ss_pred CCcCCCCCEEEEeECCCCCCcEEEEEC
Confidence 4699999998 49999865
No 173
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.76 E-value=0.25 Score=34.16 Aligned_cols=17 Identities=12% Similarity=0.083 Sum_probs=14.1
Q ss_pred CccCCCCccc-----------ccccccc
Q psy10229 34 NSIFSFPPIL-----------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil-----------~Wwqa~~ 50 (231)
.|+|++|||| .||+++.
T Consensus 24 eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~ 51 (73)
T 2dl7_A 24 ELSFPEGAIIRILNKENQDDDGFWEGEF 51 (73)
T ss_dssp BCCBCTTCEEEEEECCCSSSSSCEEEEE
T ss_pred cCCCCCCCEEEEEECCCCCCCCcEEEEE
Confidence 4699999998 3999884
No 174
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=85.71 E-value=0.33 Score=32.08 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=17.6
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.|..+ -.|+|++||++ .||.++.
T Consensus 11 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 45 (60)
T 1oot_A 11 SFAGEES-GDLPFRKGDVITILKKSDSQNDWWTGRV 45 (60)
T ss_dssp CBCCCST-TBCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred cCCcCCc-CEeeEcCCCEEEEEEeCCCCCCeEEEEE
Confidence 3444432 34699999998 3999986
No 175
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=85.68 E-value=0.32 Score=33.45 Aligned_cols=27 Identities=11% Similarity=0.115 Sum_probs=18.7
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.|-.+ -.|+|+.|||+ .||.++.
T Consensus 12 l~~y~~~~~-~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (71)
T 2fpf_A 12 IFRFVPRHE-DELELEVDDPLLVELQAEDYWYEAYN 46 (71)
T ss_dssp CSCBCCSST-TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CeeECccCC-CcccCcCCcEEEEeEecCCCEEEEEE
Confidence 344455442 34699999999 4999985
No 176
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.65 E-value=0.39 Score=32.76 Aligned_cols=25 Identities=24% Similarity=0.157 Sum_probs=17.1
Q ss_pred CCCCCCCCCCccCCCCccc-----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-----------~Wwqa~~ 50 (231)
+|.|-.+ -.|+|++|||+ .||.++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 50 (71)
T 2cre_A 15 DNCPDCS-DELAFSRGDILTILEQHVPESEGWWKCLL 50 (71)
T ss_dssp CCCCSSS-SBCCCCSSCCEEEEESCCTTSTTEEEEES
T ss_pred ccCcCCC-CCCCCCCCCEEEEeEcCCCCCCCcEEEEE
Confidence 3444432 34699999998 3999873
No 177
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=85.51 E-value=0.26 Score=33.60 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=14.3
Q ss_pred CccCCCCccc-----------ccccccc
Q psy10229 34 NSIFSFPPIL-----------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil-----------~Wwqa~~ 50 (231)
.|+|+.||++ .||.++.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 46 (69)
T 1wyx_A 19 ELSFRKGDIMTVLEQDTQGLDGWWLCSL 46 (69)
T ss_dssp BCCBCTTCEEEEEETTGGGCTTEEEEEE
T ss_pred ccCCcCCCEEEEeECCCCCCCCcEEEEE
Confidence 5699999998 3999984
No 178
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.50 E-value=0.34 Score=34.93 Aligned_cols=24 Identities=8% Similarity=0.073 Sum_probs=17.5
Q ss_pred CCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
|.|.. +-.|+|+.|||+ .||.++.
T Consensus 26 y~~~~-~~eLs~~~Gd~i~v~~~~~~gWw~g~~ 57 (88)
T 2cub_A 26 YMAER-EDELSLIKGTKVIVMEKCSDGWWRGSY 57 (88)
T ss_dssp CCCCS-TTBCCCCTTEEEEEEEECTTSEEEEEE
T ss_pred cCCCC-CCCcCCCCCCEEEEEEccCCCeEEEEE
Confidence 34443 234699999999 4999986
No 179
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=85.31 E-value=0.33 Score=34.91 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=18.2
Q ss_pred CCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
|.|.. +-.|+|+.||++ .||+++..
T Consensus 12 y~~~~-~~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 43 (90)
T 3reb_B 12 YVSWS-PDDLSFQKGDQMVVLEESGEWWKARSL 43 (90)
T ss_dssp BCCSS-TTBCCBCTTCEEEEEECSSSEEEEEET
T ss_pred cCcCC-cCcCCCCCCCEEEEEEeCCCEEEEEEC
Confidence 44444 235699999999 59999873
No 180
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.19 E-value=0.32 Score=33.12 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+|.|..+ -.|+|+.||++ .||.++..
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 48 (70)
T 2ct3_A 15 QYRPQNE-DELELREGDRVDVMQQCDDGWFVGVSR 48 (70)
T ss_dssp CBCCSST-TBCCBCTTEEEEEEEECSSSCEEEEES
T ss_pred cCCcCCc-CCccCCCCCEEEEEEECCCCEEEEEEC
Confidence 3344432 24699999999 49999764
No 181
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=85.11 E-value=0.2 Score=35.20 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=14.4
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|+.|||+ .||.++.
T Consensus 7 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 31 (77)
T 2jmc_A 7 EVTMKKGDILTLLNSTNKDWWKVEV 31 (77)
T ss_dssp CCCCCTTCEEECCCCCCSSCCCEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEE
Confidence 4699999999 4999974
No 182
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=85.07 E-value=0.28 Score=34.14 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=14.4
Q ss_pred CccCCCCccc---------ccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~ 50 (231)
.|+|++|||+ .||+++.
T Consensus 25 eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 50 (74)
T 1gbq_A 25 ELSFKRGDILKVLNEECDQNWYKAEL 50 (74)
T ss_dssp BCCBCTTCEEECCBCSSCSSEEEEEE
T ss_pred eeeEcCCCEEEEeEecCCCCEEEEEE
Confidence 5699999998 3999985
No 183
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=85.00 E-value=0.41 Score=32.71 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
..+|.+..+ -.|+|+.||++ .||.++.
T Consensus 12 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 48 (71)
T 1u5s_A 12 LYPFSSVTE-EELNFEKGETMEVIEKPENDPEWWKCKN 48 (71)
T ss_dssp SSCCCCCSS-SBCCCCSSCCEEEEECCCTTTCEEEEEE
T ss_pred cccCCCCCC-CcccCCCCCEEEEEECCCCCCCCEEEEe
Confidence 334445442 35699999998 3999974
No 184
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.88 E-value=0.33 Score=34.13 Aligned_cols=26 Identities=23% Similarity=0.411 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
+|.+..+ -.|+|+.|||| .||+++..
T Consensus 21 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 55 (78)
T 2dl5_A 21 SYKASQP-DELTIEEHEVLEVIEDGDMEDWVKARNK 55 (78)
T ss_dssp CBCCCST-TBCCBCSSEEEEEEECCSSSSEEEEECT
T ss_pred eECCCCC-CCCCCCCCCEEEEEeccCCCCcEEEEeC
Confidence 3344432 35699999998 49999864
No 185
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=84.71 E-value=0.38 Score=36.98 Aligned_cols=28 Identities=4% Similarity=0.068 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
..+|.+-. +-.|+|+.|||+ .||+++..
T Consensus 65 lydy~a~~-~~eLsf~~Gd~i~vl~~~~gWw~g~~~ 99 (119)
T 2rqr_A 65 IYNFQGSG-APQLSLQIGDVVRIQETCGDWYRGYLI 99 (119)
T ss_dssp CSCBCCCS-TTBCCBCTTCEEEEEEEETTEEEEEES
T ss_pred ccccCCCC-CCcccCcCCCEEEEEEcCCCEEEEEEC
Confidence 33444443 335699999999 59999875
No 186
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=84.66 E-value=2 Score=34.10 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=21.0
Q ss_pred CCCCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 109 IDYARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 109 ~~~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
+...+.|+|.||+ |+|+.++|.+.+.
T Consensus 12 ~~~~~~I~l~G~~GsGKsT~~~~L~~~~g 40 (203)
T 1ukz_A 12 PDQVSVIFVLGGPGAGKGTQCEKLVKDYS 40 (203)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 4455678999999 9999999988753
No 187
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=84.61 E-value=0.34 Score=34.81 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=18.3
Q ss_pred CCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
|.+.. +-.|+|+.||++ .||+++..
T Consensus 15 y~a~~-~~eLsf~~Gd~i~vl~~~~~~Ww~g~~~ 47 (84)
T 4ag1_C 15 YNATR-WTDLSFHKGEKFQILEFGPGDWWEARSL 47 (84)
T ss_dssp BCCSB-TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCCCC-CCcccccCCCEEEEEEecCCCeEEEEEC
Confidence 44443 235699999998 49999874
No 188
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=84.58 E-value=0.3 Score=35.27 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCccCCCCccc--------cccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRK 49 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~ 49 (231)
.+|.|.. +-.|+|+.|||+ .||.++
T Consensus 24 ydy~a~~-~~eLsf~~Gd~i~Vl~~~~~gWw~g~ 56 (83)
T 1neg_A 24 YDYQEKS-PREVTMKKGDILTLLNSTNKDWWKVE 56 (83)
T ss_dssp SCBCCSS-TTBCCBCTTCEEEEEECCSSSEEEEE
T ss_pred cccCCCC-CCccccCCCCEEEEEEecCCCEEEEE
Confidence 3444444 235699999999 499984
No 189
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.55 E-value=0.37 Score=34.10 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 16 dy~~~~~-~eLs~~~Gd~i~vl~~~~~gWw~g~~ 48 (80)
T 2ekh_A 16 AYQKVQD-SEISFPAGVEVQVLEKQESGWWYVRF 48 (80)
T ss_dssp CBCCSST-TSCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCCCCCC-CccCcCCCCEEEEEEeCCCCeEEEEE
Confidence 3444432 34699999999 4999974
No 190
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.43 E-value=0.23 Score=34.81 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=14.7
Q ss_pred CccCCCCccc--------ccccccc
Q psy10229 34 NSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil--------~Wwqa~~ 50 (231)
.|+|++|||+ .||.++.
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (76)
T 2epd_A 26 ELSFRRGDVLRLHERASSDWWRGEH 50 (76)
T ss_dssp BCEECTTCEEEEEEEEETTEEEEEE
T ss_pred ccCCCCCCEEEEEEeCCCCEEEEEE
Confidence 4699999999 4999986
No 191
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.43 E-value=0.32 Score=33.66 Aligned_cols=25 Identities=4% Similarity=0.139 Sum_probs=17.3
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.+..+ -.|+|++|||| .||.++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 49 (73)
T 2dm1_A 15 NFAARDM-RELSLREGDVVRIYSRIGGDQGWWKGET 49 (73)
T ss_dssp CBCCCST-TBCCBCTTCEEECCBSSSSSSSCEEEEE
T ss_pred cCCcCCC-CcCCCCCCCEEEEEEecCCCCCeEEEEE
Confidence 3444432 34699999998 3999975
No 192
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.35 E-value=0.4 Score=32.76 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.+-.+ -.|+|+.|||+ .||.++.
T Consensus 15 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 49 (70)
T 2da9_A 15 PYEAQND-DELTIKEGDIVTLINKDCIDVGWWEGEL 49 (70)
T ss_dssp CCCCSST-TBCCCCTTEEEEEEECCCSSTTEEEEEC
T ss_pred CCCCCCc-CEeeEcCCCEEEEEECCCCCCCeEEEEE
Confidence 3444432 34699999998 3999984
No 193
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=84.23 E-value=0.32 Score=35.43 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
.+|.+-.+ -.|+|+.|||| .||.++.
T Consensus 12 ydy~a~~~-~eLsf~~Gd~i~v~~~~~~~~gWw~g~~ 47 (93)
T 1uff_A 12 YPFEARNH-DEMSFNSGDIIQVDEKTVGEPGWLYGSF 47 (93)
T ss_dssp SCBCCCSS-SCCCBCTTCEEEECSSCCCSSSEEEEEE
T ss_pred ccCCCCCC-CCcCCCCCCEEEEeEccCCCCCEEEEEE
Confidence 34444432 34699999998 3999984
No 194
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.15 E-value=0.44 Score=32.56 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=18.4
Q ss_pred CCCCCCCCCCCccCCCCccc--------c-ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------E-WHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~-Wwqa~~~ 51 (231)
.+|.+..+ -.|+|+.||++ + ||+++..
T Consensus 14 ydy~~~~~-~eLs~~~Gd~i~vl~~~~~~gW~~~~~~ 49 (70)
T 2ct4_A 14 YHFEGSSE-GTISMAEGEDLSLMEEDKGDGWTRVRRK 49 (70)
T ss_dssp SCBCCCST-TCCCBCTTCEEEEEECCSSSCEEEEECS
T ss_pred ccCCCCCC-CcCCCCCCCEEEEEeccCCCCeEEEEeC
Confidence 34444442 34699999998 2 9999854
No 195
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=83.86 E-value=0.44 Score=34.19 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=18.2
Q ss_pred CCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+|.+.. +-.|+|+.||++ .||.++..
T Consensus 39 dy~~~~-~~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 71 (86)
T 2jxb_A 39 DYTAQQ-DQELDIKKNERLWLLDDSKTWWRVRNA 71 (86)
T ss_dssp CCCCCS-SSBCCCCTTEEEEEEECCSSEEEEECT
T ss_pred cCCCCC-CCEeccCCCCEEEEEecCCCeEEEEEC
Confidence 444443 235699999999 49999854
No 196
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=83.70 E-value=0.55 Score=32.22 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=15.0
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 24 eLs~~~Gd~i~v~~~~~~~gWw~g~~~ 50 (72)
T 1spk_A 24 LLSFAQGDVLTLLIPEEKDGWLYGEHD 50 (72)
T ss_dssp BCCBCTTCEEEECCSSCBTTEEEEEET
T ss_pred CCcCCCCCEEEEeEccCCCCcEEEEEC
Confidence 4699999998 49999864
No 197
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=83.65 E-value=2.3 Score=33.48 Aligned_cols=19 Identities=32% Similarity=0.433 Sum_probs=16.7
Q ss_pred ceEEEECCC---hHHHHHHHHh
Q psy10229 113 RPVIILGPL---KDRINDDLIS 131 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~ 131 (231)
..++|+||+ |+|+.+.|..
T Consensus 3 ~ii~l~G~~GaGKSTl~~~L~~ 24 (189)
T 2bdt_A 3 KLYIITGPAGVGKSTTCKRLAA 24 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCcHHHHHHHHhc
Confidence 467899999 9999999976
No 198
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=83.59 E-value=1.7 Score=34.50 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=20.1
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
..+..|+|.||+ |+|+.+.|.+..+
T Consensus 7 ~~~~~I~l~G~~GsGKsT~~~~L~~~l~ 34 (215)
T 1nn5_A 7 RRGALIVLEGVDRAGKSTQSRKLVEALC 34 (215)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 345679999998 9999999987643
No 199
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=83.46 E-value=1.7 Score=34.87 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=19.5
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.....|+|+||+ |+|+.+.|....
T Consensus 27 ~~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 27 EPTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 456789999999 999999998764
No 200
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=83.32 E-value=0.43 Score=32.55 Aligned_cols=26 Identities=4% Similarity=0.072 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
+|.+..+ -.|+|+.||++ .||+++..
T Consensus 14 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 48 (71)
T 2jt4_A 14 DFMAESQ-DELTIKSGDKVYILDDKKSKDWWMCQLV 48 (71)
T ss_dssp CBCCSST-TBCCBCTTCEEEEEESSSCSSEEEEEET
T ss_pred cCCCCCC-CcccCCCCCEEEEEECCCCCCCEEEEEC
Confidence 3344432 24699999998 49999864
No 201
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=83.10 E-value=0.38 Score=33.14 Aligned_cols=17 Identities=12% Similarity=0.175 Sum_probs=14.4
Q ss_pred CccCCCCccc----------ccccccc
Q psy10229 34 NSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil----------~Wwqa~~ 50 (231)
.|+|+.||++ .||.++.
T Consensus 25 eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 51 (73)
T 2k9g_A 25 ELTIKEGDIVTLINKDCIDVGWWEGEL 51 (73)
T ss_dssp BCCBCTTCEEEEEECCSSSTTEEEEEE
T ss_pred eeeECCCCEEEEEECCCCCCCEEEEEE
Confidence 4699999998 3999985
No 202
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.81 E-value=0.46 Score=33.51 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=17.4
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 25 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 59 (81)
T 1x43_A 25 DYDAANS-TELSLLADEVITVFSVVGMDSDWLMGER 59 (81)
T ss_dssp CCCCSST-TBCCCCTTCEEEEECCTTCCTTEEEEEE
T ss_pred cCCCCCC-CcCCCCCCCEEEEEEcCCCCCCcEEEEE
Confidence 4444432 35699999998 3999974
No 203
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=82.80 E-value=0.56 Score=33.74 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=17.3
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.+..+ -.|+|++|||| .||.++.
T Consensus 25 dy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 59 (91)
T 1wx6_A 25 PFSSVTE-EELNFEKGETMEVIEKPENDPEWWKCKN 59 (91)
T ss_dssp CCCCSSS-SBCCCCTTCEEEEEECCSSCTTEEEEEC
T ss_pred cCCcCCC-CcccCCCCCEEEEEECCCCCCCcEEEEe
Confidence 3444432 34699999998 3999974
No 204
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=82.80 E-value=0.46 Score=33.36 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCCccCCCCccc------------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL------------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil------------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|+.||++ .||.++.
T Consensus 18 Alydy~~~~~-~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~ 57 (79)
T 1uhc_A 18 AVYTFKARNP-NELSVSANQKLKILEFKDVTGNTEWWLAEV 57 (79)
T ss_dssp ESSCBCCCSS-SBCCBCTTCEEEEEESCCTTSCTTEEEEES
T ss_pred ECccCCCCCC-CccCCCCCCEEEEEECCCCCCCCCeEEEEe
Confidence 4445555543 34699999998 3999973
No 205
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=82.67 E-value=2.2 Score=33.05 Aligned_cols=23 Identities=13% Similarity=0.111 Sum_probs=19.1
Q ss_pred ceEEEECCC---hHHHHHHHHhhCCC
Q psy10229 113 RPVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
+.|+|.||+ |+|+.+.|.+..++
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~~ 27 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 358899999 99999999887653
No 206
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.56 E-value=0.46 Score=33.91 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=17.5
Q ss_pred CCCCCCCCCCccCCCCccc----------ccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil----------~Wwqa~~ 50 (231)
+|.+-.+ -.|+|+.|||+ .||.++.
T Consensus 16 dy~~~~~-~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~ 50 (85)
T 2dlp_A 16 SYITDNC-SLLSFHRGDLIKLLPVATLEPGWQFGSA 50 (85)
T ss_dssp CBCCSSS-SBCCBCTTCEEEECCCSCCCTTEEEEES
T ss_pred CCCccCc-CCccCcCCCEEEEEEccCCCCCeEEEEE
Confidence 3444432 34699999998 3999875
No 207
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=82.26 E-value=3.3 Score=31.70 Aligned_cols=19 Identities=16% Similarity=0.357 Sum_probs=16.9
Q ss_pred ceEEEECCC---hHHHHHHHHh
Q psy10229 113 RPVIILGPL---KDRINDDLIS 131 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~ 131 (231)
+.|+|.||+ |+|+.++|.+
T Consensus 3 ~~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHHHHh
Confidence 568899999 9999999987
No 208
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=81.77 E-value=8.6 Score=29.53 Aligned_cols=23 Identities=26% Similarity=0.456 Sum_probs=18.0
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|+|.|+. |+|+.+.|.+...
T Consensus 5 ~~~I~l~G~~GsGKST~a~~La~~l~ 30 (183)
T 2vli_A 5 SPIIWINGPFGVGKTHTAHTLHERLP 30 (183)
T ss_dssp CCEEEEECCC----CHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 4568899998 9999999987654
No 209
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.60 E-value=0.4 Score=33.72 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=14.6
Q ss_pred CccCCCCccc----------ccccccc
Q psy10229 34 NSIFSFPPIL----------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil----------~Wwqa~~ 50 (231)
.|+|++|||| .||.++.
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~~Ww~g~~ 59 (80)
T 2d8h_A 33 DLNFQAGDRITVISKTDSHFDWWEGKL 59 (80)
T ss_dssp BCEECTTCEEEEEECCSCSSSEEEEEE
T ss_pred eeeEcCCCEEEEeECcCCCCCeEEEEE
Confidence 4699999998 3999986
No 210
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=81.51 E-value=1.6 Score=34.24 Aligned_cols=22 Identities=18% Similarity=0.462 Sum_probs=18.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.+.|+|+||+ |+|+.+.|.+.+
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l 36 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKY 36 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 3568899998 999999998864
No 211
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=81.35 E-value=0.81 Score=33.70 Aligned_cols=32 Identities=3% Similarity=-0.014 Sum_probs=21.9
Q ss_pred ccCCCCCCCCCCCCCccCCCCccc----------ccccccccc
Q psy10229 20 FDRKNSYLPMNPGLNSIFSFPPIL----------EWHGRKKKM 52 (231)
Q Consensus 20 ~~~~~~~~p~~~~~gl~F~~gdil----------~Wwqa~~~~ 52 (231)
+.+-.+|....+ --|+|++||++ +||-+|...
T Consensus 20 ~valydF~Ar~~-~ELS~~kGd~vevle~~~~~peW~lvr~~~ 61 (82)
T 1u3o_A 20 TVVLQDFSAAHS-SELSIQVGQTVELLERPSERPGWCLVRTTE 61 (82)
T ss_dssp EECSSCBCCCST-TCCCBCTTCEEEESSCTTSSTTEEEEEESS
T ss_pred EEEEeeecCCCC-CeeeEcCCCEEEEEecCCCCCCEEEEEECC
Confidence 345555555542 34599999999 599999743
No 212
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=81.31 E-value=0.38 Score=33.13 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=18.6
Q ss_pred CCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+|.|-. +-.|+|+.||++ .||+++..
T Consensus 19 dy~~~~-~~eLs~~~Gd~i~v~~~~~~W~~g~~~ 51 (74)
T 2m0y_A 19 NYDARG-ADELSLQIGDTVHILETYEGWYRGYTL 51 (74)
T ss_dssp EECCCS-SSBCCEETTEEEEEEEBSSSCEEEEES
T ss_pred eeCCCC-cCcccCCCCCEEEEEEcCCCeEEEEEC
Confidence 344443 235699999999 49999874
No 213
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=81.21 E-value=4.1 Score=30.53 Aligned_cols=19 Identities=26% Similarity=0.256 Sum_probs=16.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.|+|+||+ |+|+.+.| +.+
T Consensus 3 ~I~l~G~~GsGKsT~a~~L-~~~ 24 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL-KER 24 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH-HHT
T ss_pred EEEEECCCCCCHHHHHHHH-HHC
Confidence 57889999 99999999 553
No 214
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.49 E-value=0.72 Score=32.39 Aligned_cols=28 Identities=4% Similarity=0.201 Sum_probs=19.3
Q ss_pred CCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
..+|.+..+ -.|+|+.|||+ .||.++..
T Consensus 23 l~dy~~~~~-~eLs~~~Gd~i~v~~~~~gW~~g~~~ 57 (79)
T 1x6b_A 23 TKAFFAKQA-DEVTLQQADVVLVLQQEDGWLYGERL 57 (79)
T ss_dssp SSCCCCCSS-SBCCCCTTEEEEEEEEETTEEEEEET
T ss_pred CeeECCCCc-CCcCCCCCCEEEEEEeCCCEEEEEEC
Confidence 344444442 34699999999 49999864
No 215
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.41 E-value=0.8 Score=31.77 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=14.8
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|+.|||+ .||+++..
T Consensus 26 eLs~~~Gd~i~v~~~~~~~gW~~g~~~ 52 (77)
T 2enm_A 26 ELTVTEGEIITVTNPNVGGGWLEGKNN 52 (77)
T ss_dssp BCCCCTTCEEEEEESCCSSSEEEEECT
T ss_pred eecCCCCCEEEEeEccCCCCeEEEEEC
Confidence 4699999998 49999853
No 216
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=80.29 E-value=0.82 Score=35.93 Aligned_cols=20 Identities=15% Similarity=-0.076 Sum_probs=17.2
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.|+|.||+ |+|+.++|.+..
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899998 999999998864
No 217
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=80.13 E-value=0.73 Score=35.00 Aligned_cols=30 Identities=7% Similarity=0.033 Sum_probs=21.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc---------c--cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL---------E--WHGRKKKM 52 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil---------~--Wwqa~~~~ 52 (231)
+..+|.|-.+ -.|+|++|||+ . ||.++...
T Consensus 27 Alydy~a~~~-~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~ 67 (108)
T 1i1j_A 27 ALQDYMAPDC-RFLTIHRGQVVYVFSKLKGRGRLFWGGSVQG 67 (108)
T ss_dssp ESSCBCCSST-TBCCBCTTCEEEEEEEECGGGTTEEEEEEBC
T ss_pred ECCccCCCCC-CccccCCCCEEEEEEecCCCCCCEEEEEECC
Confidence 4445555553 35699999998 2 99998753
No 218
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=79.84 E-value=0.72 Score=37.91 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=20.4
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.|.. +-.|+|+.|||+ .||+++.
T Consensus 163 al~~y~~~~-~~eL~~~~Gd~i~v~~~~~~~W~~g~~ 198 (217)
T 1gri_A 163 ALFDFDPQE-DGELGFRRGDFIHVMDNSDPNWWKGAC 198 (217)
T ss_dssp ESSCCCCSS-TTBCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred ecCCccCCC-CCcCCCCCCCEEEEEEeCCCCeEEEEE
Confidence 344555554 346799999999 4999986
No 219
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=79.52 E-value=0.61 Score=39.64 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=45.4
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCc---ccccCCC----CCcchhHHHHHHHHhc-cCce-eEEeccCCccch--
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQF---GSCVPPL----GKMYDRSMKMEQEFGE-FFTA-VVQGDMPEDIYQ-- 176 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F---~~~vp~T----G~dY~FVe~fe~~i~~-~Fd~-iE~g~~~g~~Y~-- 176 (231)
....|+|.||. |+|+.++|.+..+..| +..+-.| |.. +-+.+.+.+.+ .++. .|.--|..+.|+
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~rep~~t~--~g~~ir~~l~~~~~~~~~~~llf~a~R~~~~ 101 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTR--LGETLREILLNQPMDLETEALLMFAGRREHL 101 (227)
T ss_dssp CCCEEEEECCC---CHHHHHHHHHHHHHHHGGGTCCEEEEESSSSSH--HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhhccccceeeeeecCCCCCh--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45678999999 9999999988765432 2222112 211 11555555554 3310 122123344443
Q ss_pred --HHHHHHHhcCCCCCCCcEEEEE
Q psy10229 177 --KVKEVIQEQSGPSIWGKHCILD 198 (231)
Q Consensus 177 --sV~~v~~~~~~~~~wGk~cILD 198 (231)
.|+..+++ |+++|+|
T Consensus 102 ~~~i~p~l~~-------g~~VI~D 118 (227)
T 3v9p_A 102 ALVIEPALAR-------GDWVVSD 118 (227)
T ss_dssp HHTHHHHHHT-------TCEEEEE
T ss_pred HHHHHHHHHc-------CCEEEEe
Confidence 35566677 9999999
No 220
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=79.42 E-value=0.91 Score=38.29 Aligned_cols=28 Identities=14% Similarity=0.187 Sum_probs=19.9
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|++|||+ .||+++.
T Consensus 141 al~dy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 176 (230)
T 2dvj_A 141 ALFDFNGNDE-EDLPFKKGDILRIRDKPEEQWWNAED 176 (230)
T ss_dssp CCSCCCCSSS-SSCCCCSSCBCCCCBCSCSSEEEEEC
T ss_pred EeeeecCCCC-CCccCcCCCEEEEEEccCCCcEEEEe
Confidence 4455555542 35699999999 4999983
No 221
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=79.32 E-value=0.66 Score=36.76 Aligned_cols=27 Identities=7% Similarity=0.158 Sum_probs=18.6
Q ss_pred CCCCCCCCCCCCccCCCCccc---------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~ 50 (231)
..+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 11 lydy~a~~~-~ELsf~~Gd~i~Vl~~~~~~gWw~g~~ 46 (142)
T 2kbt_A 11 RYDFCARDR-SELSLKEGDIIKILNKKGQQGWWRGEI 46 (142)
T ss_dssp SSCCCCSSS-SBCCCCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCccCCCCC-CcCCCCCCCEEEEEEecCCCCeEEEEE
Confidence 334445442 34699999998 4999985
No 222
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=78.20 E-value=0.82 Score=33.34 Aligned_cols=29 Identities=7% Similarity=0.000 Sum_probs=20.2
Q ss_pred CCCCCCCCCCCCCccCCCCccc-------------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL-------------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil-------------~Wwqa~~~ 51 (231)
+..+|.|..+ -.|+|+.|||+ .||+++..
T Consensus 34 Alydy~a~~~-~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~ 75 (89)
T 2rf0_A 34 AVFDYEAAGD-EELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP 75 (89)
T ss_dssp ECSCBCCSST-TBCCBCTTCEEEEEECCHHHHSSTTEEEEECT
T ss_pred ECCccCCCCC-CccccCCCCEEEEEeccCCcccCCCEEEEEEC
Confidence 4445555543 35699999998 29999864
No 223
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=76.71 E-value=2.9 Score=39.92 Aligned_cols=99 Identities=11% Similarity=0.028 Sum_probs=51.0
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCCCcccccCCCCCcchhH--HHHHHHHhc--cCceeEEeccCCccchHHHHHHHh
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPEQFGSCVPPLGKMYDRS--MKMEQEFGE--FFTAVVQGDMPEDIYQKVKEVIQE 184 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~vp~TG~dY~FV--e~fe~~i~~--~Fd~iE~g~~~g~~Y~sV~~v~~~ 184 (231)
...|+|+|++ |+|+.+.|.+.... .|..+.++ +.+.+.+.. .|...|....-..+...++.+++.
T Consensus 372 ~~~I~l~G~~GsGKSTia~~La~~L~~--------~G~~~~~ld~D~ir~~l~~~~~f~~~er~~~l~~i~~~~~~~l~~ 443 (546)
T 2gks_A 372 GFCVWLTGLPCAGKSTIAEILATMLQA--------RGRKVTLLDGDVVRTHLSRGLGFSKEDRITNILRVGFVASEIVKH 443 (546)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH--------TTCCEEEECHHHHHHHTCTTCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEccCCCCCCHHHHHHHHHHHhhh--------cCCeEEEECchHhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 4567888988 99999998775321 13444555 444444332 231111000000011345556677
Q ss_pred cCCCCCCCcEEEEEec---HHHHHHHHHcC--CCcEEEEEcCCCHH
Q psy10229 185 QSGPSIWGKHCILDVS---GNAIKRLQVAS--LYPVAIFIKPKSVE 225 (231)
Q Consensus 185 ~~~~~~wGk~cILDv~---~qgvk~Lr~~~--~~PivIFI~ppS~e 225 (231)
|..+|+|.. ......++..- ...++|||..|--.
T Consensus 444 -------G~~VI~d~~~~~~~~r~~~~~~l~~~d~~vV~L~~~~e~ 482 (546)
T 2gks_A 444 -------NGVVICALVSPYRSARNQVRNMMEEGKFIEVFVDAPVEV 482 (546)
T ss_dssp -------TCEEEEECCCCCHHHHHHHHTTSCTTCEEEEEEECCGGG
T ss_pred -------CCEEEEEcCCCCHHHHHHHHHHhhcCCEEEEEEeCCHHH
Confidence 999999942 12222333211 12388999875433
No 224
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=76.29 E-value=0.8 Score=38.92 Aligned_cols=24 Identities=25% Similarity=0.392 Sum_probs=17.4
Q ss_pred CCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 26 YLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 26 ~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
|.|-+ +-.|+|+.||++ .||.++.
T Consensus 11 ~~~~~-~~el~~~~gd~i~v~~~~~~~w~~~~~ 42 (283)
T 3jv3_A 11 YTAQN-DDELAFSKGQIINVLNKEDPDWWKGEV 42 (283)
T ss_dssp BCCSS-TTBCCBCTTCEEEEEECCSTTEEEEEE
T ss_pred cCCCC-CCcCCCCCCCEEEEEecCCCCEEEEEE
Confidence 34444 235699999999 4999974
No 225
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=75.76 E-value=5.6 Score=33.58 Aligned_cols=21 Identities=14% Similarity=0.294 Sum_probs=18.1
Q ss_pred ceEEEECCC---hHHHHHHHHhhC
Q psy10229 113 RPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
+.|+|.||+ |+|+.++|.+.+
T Consensus 3 ~~I~l~G~~GsGKST~a~~L~~~~ 26 (301)
T 1ltq_A 3 KIILTIGCPGSGKSTWAREFIAKN 26 (301)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHhC
Confidence 568999999 999999998754
No 226
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=74.62 E-value=0.94 Score=34.70 Aligned_cols=20 Identities=5% Similarity=-0.265 Sum_probs=16.5
Q ss_pred CCCccCCCCccc--------cccccccc
Q psy10229 32 GLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 32 ~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
.--|+|++|++| +||-+|..
T Consensus 55 ~~DLpfkkGE~LeVI~~~e~~wwLcRNs 82 (102)
T 1ri9_A 55 TRDLQVKPGESLEVIQTTDDTKVLCRNE 82 (102)
T ss_dssp TTBCCCCTTCBCEEEEESSSSEEEEEET
T ss_pred cccCCcCCCCEEEEEEeCCCCEEEEECC
Confidence 446799999999 59999954
No 227
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=74.06 E-value=1.7 Score=35.53 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=19.2
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+.. +-.|+|+.|||+ .||.++.
T Consensus 16 al~dy~~~~-~~eLs~~~Gd~i~vl~~~~~gWw~g~~ 51 (193)
T 1ng2_A 16 AIADYEKTS-GSEMALSTGDVVEVVEKSESGWWFCQM 51 (193)
T ss_dssp CSSCBCCSS-TTCCCBCTTCEEEEEECCTTSCCEEEE
T ss_pred EcCCcCCCC-CCcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 334444544 345699999999 4999984
No 228
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=73.77 E-value=6.2 Score=30.93 Aligned_cols=24 Identities=13% Similarity=-0.139 Sum_probs=19.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhCCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
...|+|.||+ |+|+.+.|.+....
T Consensus 4 ~~~I~i~G~~GsGKsT~~~~L~~~l~~ 30 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQATLLKDWIEL 30 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHTT
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence 3568999998 99999999886543
No 229
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=73.61 E-value=28 Score=26.54 Aligned_cols=22 Identities=9% Similarity=0.321 Sum_probs=18.2
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
...|+|+||+ |+|+.+.|....
T Consensus 8 g~~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 8 HHIYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHhh
Confidence 4578999999 999999887653
No 230
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=73.55 E-value=0.9 Score=41.27 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=19.5
Q ss_pred ceEEEECCC---hHHHHHHHHhhCC
Q psy10229 113 RPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
+.|+|+||+ |++|..+|.+..+
T Consensus 8 ~lI~I~GptgSGKTtla~~La~~l~ 32 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVAKKFN 32 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred ceEEEECCCcCcHHHHHHHHHHHcC
Confidence 578999999 9999999998766
No 231
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=73.44 E-value=2.9 Score=33.44 Aligned_cols=23 Identities=9% Similarity=0.244 Sum_probs=19.2
Q ss_pred CCceEEEECCC---hHHHHHHHHhhC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
..+.|+|+||+ |+|+.+.|.+..
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKL 49 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHc
Confidence 34678999999 999999998754
No 232
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=73.18 E-value=1.5 Score=31.58 Aligned_cols=18 Identities=17% Similarity=0.206 Sum_probs=14.3
Q ss_pred CccCCCCccc------------cccccccc
Q psy10229 34 NSIFSFPPIL------------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil------------~Wwqa~~~ 51 (231)
.|+|+.|||| .||.++..
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~ 62 (93)
T 1wxu_A 33 EISFRAGDMLNLALKEQQPKVRGWLLASLD 62 (93)
T ss_dssp BCCBCSSCBCEECCTTTSCSCSSCEEEESS
T ss_pred ccCcCCCCEEEEEECCCCCCCCCcEEEEeC
Confidence 4699999998 39998643
No 233
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=72.84 E-value=1.4 Score=36.19 Aligned_cols=29 Identities=3% Similarity=0.056 Sum_probs=21.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc-------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL-------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~~ 51 (231)
+..+|.|-.+ -.|+|+.||++ .||+++..
T Consensus 22 Alydf~~~~~-~eLs~~~Gd~i~v~~~~~~W~~g~~~ 57 (184)
T 3a98_A 22 AIYNFQGSGA-PQLSLQIGDVVRIQETCGDWYRGYLI 57 (184)
T ss_dssp ESSCBCCSST-TBCCBCTTCEEEEEEEETTEEEEEET
T ss_pred EeeeeCCCCC-CCCCcCCCCEEEEEecCCCEEEEEEe
Confidence 4445555553 46799999999 49999874
No 234
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=71.26 E-value=1.6 Score=33.26 Aligned_cols=27 Identities=11% Similarity=0.193 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCccCCCCccc---c----------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL---E----------WHGRKKK 51 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil---~----------Wwqa~~~ 51 (231)
.+|.+-.+ -.|+|+.|||| + ||+++..
T Consensus 51 ydy~a~~~-dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~ 90 (115)
T 1bb9_A 51 HDYTATDT-DELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 90 (115)
T ss_dssp SCBCCSST-TBCCBCTTCEEEEECCSCGGGCCTTEEEEEEH
T ss_pred CccCCCCC-CccCcCCCCEEEEeeccCCcccCCCeEEEEeC
Confidence 34444432 34699999998 2 9999764
No 235
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=71.07 E-value=4.2 Score=32.29 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=18.8
Q ss_pred CCceEEEECCC---hHHHHHHHHhhC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.+..|+|.||. |+|+.+.|.+.+
T Consensus 19 ~~~~I~l~G~~GsGKST~a~~La~~l 44 (201)
T 2cdn_A 19 SHMRVLLLGPPGAGKGTQAVKLAEKL 44 (201)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 44568899998 999999998764
No 236
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=70.31 E-value=1.4 Score=40.60 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
..+|.|..+ -.|+|+.|||+ .||+++..
T Consensus 36 l~~~~~~~~-~eL~~~~gd~i~v~~~~~~~Ww~g~~~ 71 (466)
T 2pz1_A 36 LWDHVTMDD-QELGFKAGDVIEVMDATNREWWWGRVA 71 (466)
T ss_dssp SSCBCCCCT-TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred ccccCCCCC-CcCCCCCCCEEEEEEecCCCEEEEEEC
Confidence 344455543 35699999999 59999853
No 237
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=69.41 E-value=1.6 Score=39.59 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=20.1
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+..+|.|-.+ -.|+|++||++ .||+++..
T Consensus 7 al~~~~~~~~-~el~~~~gd~~~v~~~~~~~ww~~~~~ 43 (452)
T 1fmk_A 7 ALYDYESRTE-TDLSFKKGERLQIVNNTEGDWWLAHSL 43 (452)
T ss_dssp ESSCBCCCSS-SBCCBCTTCEEEESCCCSSSEEEEEET
T ss_pred ECCccCCCCC-CCCCccCCCEEEEeccCCCCceEEEEc
Confidence 3344555442 34699999999 49999874
No 238
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=69.28 E-value=1.6 Score=40.71 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+..+|.+-.+ -.|+|++|||+ .||+++..
T Consensus 90 alyd~~~~~~-~el~~~~gd~i~v~~~~~~~ww~~~~~ 126 (535)
T 2h8h_A 90 ALYDYESRTE-TDLSFKKGERLQIVNNTEGDWWLAHSL 126 (535)
T ss_dssp ESSCBCCCSS-SBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred EccccCCcCC-CcCCcCCCCEEEEEEecCCCceEEEEC
Confidence 3344445442 34699999999 59999874
No 239
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=69.07 E-value=1.8 Score=37.99 Aligned_cols=27 Identities=11% Similarity=0.191 Sum_probs=19.2
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.+.. +-.|+|++|||+ +||+++.
T Consensus 153 l~dy~~~~-~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 187 (308)
T 3qwy_A 153 TFKFTGER-ETDLPFEQGERLEILSKTNQDWWEARN 187 (308)
T ss_dssp SSCBCCSS-TTBCCBCTTCEEEEEECCSSSEEEEEC
T ss_pred eceEcCCC-CCcCcCCCCCEEEEEEcCCCCeEEEEe
Confidence 33444444 345799999999 5999985
No 240
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.46 E-value=1.9 Score=31.07 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCCccCCCCccc------------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL------------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil------------~Wwqa~~ 50 (231)
..+|.|-.+ -.|+|+.|||+ .||+++.
T Consensus 22 lydy~~~~~-~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~ 60 (94)
T 2e5k_A 22 IYPYTPQND-DELELVPGDFIFMSPMEQTSTSEGWIYGTS 60 (94)
T ss_dssp CSCBCCSSS-SBCCBCTTCEEEECGGGCCSTTTTEEEEEE
T ss_pred CCcCCCCCC-CCcCCCCCCEEEEEECcCCCCCCCcEEEEE
Confidence 334445442 34699999998 2999884
No 241
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=68.43 E-value=1.7 Score=40.04 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=23.1
Q ss_pred cccCCCCCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 19 FFDRKNSYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 19 ~~~~~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
++-+..+|.+..+ -.|+|++||++ .||.++..
T Consensus 45 ~~~alyd~~~~~~-~els~~~gd~~~v~~~~~~~~w~~~~~~ 85 (495)
T 1opk_A 45 LFVALYDFVASGD-NTLSITKGEKLRVLGYNHNGEWCEAQTK 85 (495)
T ss_dssp EEEESSCBCCCST-TBCCBCTTCEEEEEEECTTSSEEEEECS
T ss_pred EEEEeCCcCCCCC-CCCCccCCCEEEEeecCCCCCceeeeec
Confidence 3445666666653 46699999998 49999864
No 242
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=65.77 E-value=2 Score=35.22 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 24 NSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 24 ~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
.+|.+-.+ -.|+|+.|||+ .||.++.
T Consensus 88 ~dy~a~~~-~eLs~~~Gd~i~vl~~~~~gWw~g~~ 121 (193)
T 1ng2_A 88 KAYTAVEG-DEVSLLEGEAVEVIHKLLDGWWVIRK 121 (193)
T ss_dssp SCBCCCST-TBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred cccCCCCC-CcccccCCCEEEEEEecCCCeEEEEE
Confidence 34444432 34699999999 4999985
No 243
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=65.59 E-value=5.2 Score=33.86 Aligned_cols=30 Identities=13% Similarity=0.282 Sum_probs=24.1
Q ss_pred CCceEE-EECCC--hHHHHHHHHhhCCCCcccc
Q psy10229 111 YARPVI-ILGPL--KDRINDDLISEFPEQFGSC 140 (231)
Q Consensus 111 ~~RpVV-L~GPs--k~~l~~~Ll~~~P~~F~~~ 140 (231)
.+.|+| |+|.. .+|+..+|+..||+.++..
T Consensus 22 ~p~PiiFIvG~pRSGTTlL~~iL~~Hp~v~~~~ 54 (313)
T 4gox_A 22 NPNPIAFILSSPRSGSTLLRVMLAGHPGLYSPP 54 (313)
T ss_dssp BCSCEEEEECCTTSSHHHHHHHHHTSTTEECCS
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHcCCCCccCC
Confidence 456775 78987 8999999999999987543
No 244
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=65.02 E-value=2.4 Score=34.72 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=14.2
Q ss_pred CccCCCCccc---------ccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~ 50 (231)
.|+|++||++ .||.++.
T Consensus 16 eLs~~~Gd~i~v~~~~~~~~W~~~~~ 41 (217)
T 1gri_A 16 ELSFKRGDILKVLNEECDQNWYKAEL 41 (217)
T ss_dssp CCCBCTTCEEEC------CCEEEEES
T ss_pred cCCCCCCCEEEEEeccCCCCeEeecc
Confidence 4599999998 3999974
No 245
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=64.22 E-value=1.6 Score=32.99 Aligned_cols=19 Identities=5% Similarity=-0.186 Sum_probs=15.5
Q ss_pred CCccCCCCccc----------cccccccc
Q psy10229 33 LNSIFSFPPIL----------EWHGRKKK 51 (231)
Q Consensus 33 ~gl~F~~gdil----------~Wwqa~~~ 51 (231)
--|+|+.|++| +||-||..
T Consensus 42 ~dLp~~~GE~LeII~~~e~p~g~Wl~RN~ 70 (96)
T 2gtj_A 42 NELSFKQGEQIEIIRITDNPEGKWLGRTA 70 (96)
T ss_dssp SCCEECTTCCEEEEECTTCSSSCCEEECT
T ss_pred ccCCcCCCCEEEEEEccCCCCCeEEEECC
Confidence 45699999999 39999954
No 246
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=63.92 E-value=6.6 Score=28.09 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCC-CccCCCCcccc--------ccccccccCCCCccceeee
Q psy10229 22 RKNSYLPMNPGL-NSIFSFPPILE--------WHGRKKKMSRNNTAKITFR 63 (231)
Q Consensus 22 ~~~~~~p~~~~~-gl~F~~gdil~--------Wwqa~~~~~~~~~~~~~l~ 63 (231)
+--+|.|.+.+- -++++.||+.+ ||.-|-....+.+...|+.
T Consensus 10 v~aDy~p~~~~~~ei~lk~Gd~VeVl~k~~~gwW~vr~~~~~~~~~~eGWV 60 (71)
T 1v1c_A 10 VTADYLPLGAEQDAITLREGQYVEVLDAAHPLRWLVRTKPTKSSPSRQGWV 60 (71)
T ss_dssp ESSCBCCCSCCTTBCCBCTTCEEEEEEEEETTEEEEEECCCTTCCCCEEEE
T ss_pred EEecccccCCCcceeeecCCCEEEEEEcCCCCEEEEEecCCCCCCCcccee
Confidence 445677765422 56999999983 9998876433334455654
No 247
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=63.73 E-value=2.9 Score=30.09 Aligned_cols=18 Identities=6% Similarity=-0.097 Sum_probs=11.8
Q ss_pred CCCCCCCCCCccCCCCccc
Q psy10229 25 SYLPMNPGLNSIFSFPPIL 43 (231)
Q Consensus 25 ~~~p~~~~~gl~F~~gdil 43 (231)
+|.+-. +-.|+|+.|||+
T Consensus 19 dy~a~~-~~ELsf~~GD~I 36 (90)
T 3o5z_A 19 PFRRER-PEDLELLPGDVL 36 (90)
T ss_dssp CBCCCS-TTBCCBCTTCEE
T ss_pred eECCCC-CCccCCcCCCEE
Confidence 344433 234699999997
No 248
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=63.16 E-value=2.5 Score=38.26 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCccCCCCccc---------cccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil---------~Wwqa~~~ 51 (231)
..+|.+..+ -.|+|++|||+ +||+++..
T Consensus 17 ly~~~~~~~-~el~~~~gd~i~v~~~~~~~~ww~~~~~ 53 (450)
T 1k9a_A 17 KYNFHGTAE-QDLPFCKGDVLTIVAVTKDPNWYKAKNK 53 (450)
T ss_dssp SSCBCCSSS-SBCCBCTTCEEEEEEECSSTTEEEEECT
T ss_pred CCCcCccCC-CcCCCCCCCEEEEeeccCCCCceEEEEC
Confidence 334444442 24599999999 49999854
No 249
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=63.11 E-value=2.6 Score=38.10 Aligned_cols=28 Identities=14% Similarity=0.245 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCccCCCCccc-------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL-------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil-------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|++||++ +||+++.
T Consensus 13 al~~~~~~~~-~el~~~~gd~~~v~~~~~~W~~~~~ 47 (454)
T 1qcf_A 13 ALYDYEAIHH-EDLSFQKGDQMVVLEESGEWWKARS 47 (454)
T ss_dssp ESSCBCCCST-TBCCBCTTCEEEEEECCTTEEEEEE
T ss_pred ECcccCCcCC-CcCcccCCCEEEEEecCCCCeEEEE
Confidence 4445555543 35699999999 5999984
No 250
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=62.72 E-value=15 Score=29.92 Aligned_cols=20 Identities=20% Similarity=0.476 Sum_probs=17.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.|+|.||. |+|+.++|.+.+
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~l 24 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKY 24 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37889999 999999998764
No 251
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=61.46 E-value=3.5 Score=36.13 Aligned_cols=27 Identities=15% Similarity=0.201 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
..+|.+..+ -.|+|+.|||+ +||.++.
T Consensus 140 lydy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 174 (304)
T 2eyz_A 140 LFDFNGNDE-EDLPFKKGDILRIRDKPEEQWWNAED 174 (304)
T ss_dssp CSCCCCSCS-SSCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred EeeecCCCC-CcCcccCCCEEEEEEecCCCcEEEEe
Confidence 344445443 35699999999 5999984
No 252
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=60.96 E-value=3.1 Score=35.38 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=18.8
Q ss_pred CCCCCCCCCCCCccCCCCccc---c----------ccccccc
Q psy10229 23 KNSYLPMNPGLNSIFSFPPIL---E----------WHGRKKK 51 (231)
Q Consensus 23 ~~~~~p~~~~~gl~F~~gdil---~----------Wwqa~~~ 51 (231)
..+|.+..+ -.|+|+.|||| + ||+++..
T Consensus 148 LYdY~a~~~-dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~ 188 (213)
T 1mv3_A 148 QHDYTATDT-DELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 188 (213)
T ss_dssp SSCBCCCST-TCCCBCSSCEEEECCCSCGGGSCTTEEEEEEH
T ss_pred CCCcCCCCC-CcCCcCCCCEEEEeecCCCCccCCCeeEEEeC
Confidence 334444442 34699999998 2 9999864
No 253
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=59.83 E-value=4 Score=28.63 Aligned_cols=11 Identities=18% Similarity=0.102 Sum_probs=9.1
Q ss_pred CCccCCCCccc
Q psy10229 33 LNSIFSFPPIL 43 (231)
Q Consensus 33 ~gl~F~~gdil 43 (231)
-.|+|+.|||+
T Consensus 20 ~eLs~~~Gd~I 30 (83)
T 3i5r_A 20 EDIDLHLGDIL 30 (83)
T ss_dssp TBCCBCTTCEE
T ss_pred CccccCCCCEE
Confidence 34699999997
No 254
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=59.69 E-value=2.7 Score=37.40 Aligned_cols=28 Identities=11% Similarity=0.181 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------ccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+..+|.+..+ -.|+|+.|||+ .||.++.
T Consensus 179 alydy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 214 (341)
T 2dyb_A 179 ALFDFTGNSK-LELNFKAGDVIFLLSRINKDWLEGTV 214 (341)
T ss_dssp ESSCBCCSSS-SBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred EEEeeCCCCC-CcCCccCCCEEEEEEecCCCEEEEEE
Confidence 3444555543 35699999999 5999974
No 255
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=58.76 E-value=28 Score=28.97 Aligned_cols=24 Identities=25% Similarity=0.458 Sum_probs=19.9
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
..++.|+|+||. |+|+.++|.+.+
T Consensus 27 ~k~kiI~llGpPGsGKgTqa~~L~~~~ 53 (217)
T 3umf_A 27 AKAKVIFVLGGPGSGKGTQCEKLVQKF 53 (217)
T ss_dssp TSCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 356778889999 999999999864
No 256
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=54.50 E-value=27 Score=28.69 Aligned_cols=23 Identities=26% Similarity=0.241 Sum_probs=19.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|+|.||. |+|+.++|.+...
T Consensus 6 g~~i~~eG~~gsGKsT~~~~l~~~l~ 31 (213)
T 4edh_A 6 GLFVTLEGPEGAGKSTNRDYLAERLR 31 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 4678999999 9999999977654
No 257
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=54.33 E-value=5.8 Score=31.40 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.8
Q ss_pred cccCCCCCCCCCCCCCccCCCCccc--------ccccccccc
Q psy10229 19 FFDRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKKM 52 (231)
Q Consensus 19 ~~~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~~ 52 (231)
.|.+-.+|.|-. ...|+|+.||++ +||++...+
T Consensus 16 ~~~al~d~~~~~-~~el~~~~Gd~~~v~~~~~~~w~~~~~~g 56 (222)
T 3ehr_A 16 VFRALYTFEPRT-PDELYIEEGDIIYITDMSDTNWWKGTSKG 56 (222)
T ss_dssp EEEESSCCCCSS-TTBCCCCTTCEEEEEECCSSSEEEEEETT
T ss_pred EEEEeCCcCCCC-CCcccccCCCEEEEeccccchhHhcccCC
Confidence 344555666665 467899999998 599987653
No 258
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=54.02 E-value=5 Score=35.08 Aligned_cols=32 Identities=3% Similarity=-0.060 Sum_probs=21.2
Q ss_pred cccCCCCCCCC-CCCCCccCCCCccc--------ccccccc
Q psy10229 19 FFDRKNSYLPM-NPGLNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 19 ~~~~~~~~~p~-~~~~gl~F~~gdil--------~Wwqa~~ 50 (231)
+.-+..+|.|. ..+-.|+|+.|||+ .||.++.
T Consensus 239 ~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~g~~ 279 (304)
T 2eyz_A 239 YARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGEC 279 (304)
T ss_dssp CSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEEEEE
T ss_pred EEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEEEEE
Confidence 33455566653 12345699999999 4998765
No 259
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=57.44 E-value=3 Score=36.52 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 22 RKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 22 ~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
+..+|.+..+ -.|+|+.|||+ .||.++..
T Consensus 130 alydy~~~~~-~eLsf~~Gd~i~v~~~~~~~Ww~~~~~ 166 (303)
T 2lqn_A 130 TLYDFPGNDA-EDLPFKKGEILVIIEKPEEQWWSARNK 166 (303)
Confidence 4445555542 35699999999 59999853
No 260
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=48.45 E-value=74 Score=26.38 Aligned_cols=22 Identities=9% Similarity=-0.013 Sum_probs=17.4
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
...+|+|.||. |+++.+.|.+.
T Consensus 66 ~~~~vll~G~~GtGKT~la~~la~~ 90 (309)
T 3syl_A 66 PTLHMSFTGNPGTGKTTVALKMAGL 90 (309)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHH
Confidence 45689999999 99988766554
No 261
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=48.30 E-value=16 Score=30.94 Aligned_cols=24 Identities=17% Similarity=0.189 Sum_probs=19.5
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
..+.|+|.||+ |+|+.++|.+...
T Consensus 26 ~~~~i~~eG~~GsGKsT~~~~l~~~l~ 52 (236)
T 3lv8_A 26 NAKFIVIEGLEGAGKSTAIQVVVETLQ 52 (236)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45788999999 9999999877543
No 262
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=47.51 E-value=11 Score=32.05 Aligned_cols=28 Identities=11% Similarity=0.189 Sum_probs=23.4
Q ss_pred CceEEEECCC--hHHHHHHHHhhCCCCccc
Q psy10229 112 ARPVIILGPL--KDRINDDLISEFPEQFGS 139 (231)
Q Consensus 112 ~RpVVL~GPs--k~~l~~~Ll~~~P~~F~~ 139 (231)
+.+|.|+|.. .+|+..+|+..||+.|+.
T Consensus 32 P~~IFIvG~pRSGTTlL~~iL~~Hp~v~~~ 61 (323)
T 4gbm_A 32 PGIIFILSSPRSGSTLLRVMLAGHSSLFSP 61 (323)
T ss_dssp ECCEEEEECTTSSHHHHHHHHHTCTTEECC
T ss_pred CCcEEEECCCCCHHHHHHHHHHcCCCcccC
Confidence 3568788987 899999999999998754
No 263
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=47.24 E-value=70 Score=25.30 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=19.2
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.....|+|.||+ |+|+.+.|....
T Consensus 23 ~~~~~i~~~G~~GsGKsT~~~~l~~~l 49 (211)
T 1m7g_A 23 QRGLTIWLTGLSASGKSTLAVELEHQL 49 (211)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHh
Confidence 345678999999 999999887754
No 264
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=43.57 E-value=11 Score=29.13 Aligned_cols=19 Identities=21% Similarity=0.440 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|...
T Consensus 4 kv~ivG~~gvGKStLl~~l~~~ 25 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMKT 25 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 37899999 99999999874
No 265
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=42.73 E-value=27 Score=26.42 Aligned_cols=23 Identities=17% Similarity=0.223 Sum_probs=18.7
Q ss_pred CCceEEEECCC---hHHHHHHHHhhC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
...-|+|+|+. |++|.++|+...
T Consensus 22 ~~~~i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 3pqc_A 22 LKGEVAFVGRSNVGKSSLLNALFNRK 47 (195)
T ss_dssp TTCEEEEEEBTTSSHHHHHHHHHTSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHcCc
Confidence 34457889998 999999999864
No 266
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=48.30 E-value=5.3 Score=34.91 Aligned_cols=18 Identities=6% Similarity=-0.095 Sum_probs=14.9
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.|||+ .||.++.
T Consensus 254 ~eLs~~~Gd~i~v~~~~~~gWw~g~~ 279 (303)
T 2lqn_A 254 TALALEVGDIVKVTRMNINGQWEGEV 279 (303)
Confidence 35799999999 4999875
No 267
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=41.67 E-value=19 Score=27.54 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=21.4
Q ss_pred eeeccCCCCceEEEECCC---hHHHHHHHHhh
Q psy10229 104 VTQMQIDYARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 104 V~~~~~~~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
...++.....-|+|+|+. |++|.++|+..
T Consensus 15 ~~~~~~~~~~~i~v~G~~~~GKSsli~~l~~~ 46 (195)
T 1svi_A 15 PEQYPEGGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp GGGSCCSCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred hhhCCCCCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 334444455568899998 99999999875
No 268
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=41.64 E-value=24 Score=27.60 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=20.1
Q ss_pred cCCCCceEEEECCC---hHHHHHHHHhh
Q psy10229 108 QIDYARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 108 ~~~~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.+.....|+|+||+ |+|+.+.|.+.
T Consensus 6 ~~~~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 6 EQPKGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp CCCSSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 33455679999999 99999999876
No 269
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=41.03 E-value=5.7 Score=37.08 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=0.0
Q ss_pred CccCCCCccc---------cccccccc
Q psy10229 34 NSIFSFPPIL---------EWHGRKKK 51 (231)
Q Consensus 34 gl~F~~gdil---------~Wwqa~~~ 51 (231)
.|+|+.|||| .||.++..
T Consensus 444 eLsf~~Gd~i~vl~~~~~~~Ww~g~~~ 470 (486)
T 3haj_A 444 ELSFKAGDELTKMEDEDEQGWCKGRLD 470 (486)
T ss_dssp ---------------------------
T ss_pred cCccCCCCEEEEEEecCCCCeeEEEeC
Confidence 4699999998 39998864
No 270
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=40.61 E-value=22 Score=27.78 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~~ 29 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAGV 29 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 37899998 99999999864
No 271
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=39.97 E-value=20 Score=27.72 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=19.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhh
Q psy10229 110 DYARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.....|+|+||+ |+|+.+.|...
T Consensus 7 ~~g~~i~l~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 7 LGGNILLLSGHPGSGKSTIAEALANL 32 (191)
T ss_dssp CTTEEEEEEECTTSCHHHHHHHHHTC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHhc
Confidence 345789999999 99999999875
No 272
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=38.19 E-value=39 Score=28.03 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=20.9
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
..+.|+|.||. |+|+.+.|.+....
T Consensus 4 ~g~~i~~eG~~g~GKst~~~~l~~~l~~ 31 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCNILYKKLQP 31 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHHHHCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhcc
Confidence 35788999999 99999999887654
No 273
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=38.00 E-value=12 Score=35.85 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=21.3
Q ss_pred cCCCCCCCCCCCCCccCCCCccc--------cccccccc
Q psy10229 21 DRKNSYLPMNPGLNSIFSFPPIL--------EWHGRKKK 51 (231)
Q Consensus 21 ~~~~~~~p~~~~~gl~F~~gdil--------~Wwqa~~~ 51 (231)
-+-.+|.|-++ -.|+|+.|||+ .||.++..
T Consensus 446 ~aly~y~a~~~-dELs~~~GD~i~v~~~~~~gW~~G~~~ 483 (526)
T 2de0_X 446 IAIYAHQPRTA-DEIPMEPGDIIGVAGNHWDGYSKGVNR 483 (526)
T ss_dssp EECSCBCCSST-TBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred EEeecCCCCCC-CcCCcCCCCEEEEccccCCCeeEEEeC
Confidence 35556666653 35699999999 49998743
No 274
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=37.59 E-value=40 Score=30.97 Aligned_cols=105 Identities=14% Similarity=0.127 Sum_probs=53.3
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCCCCccccc-CCCCCcchhH-HHHHHHHh-----c---cCceeE-EeccCCccch
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFPEQFGSCV-PPLGKMYDRS-MKMEQEFG-----E---FFTAVV-QGDMPEDIYQ 176 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~~v-p~TG~dY~FV-e~fe~~i~-----~---~Fd~iE-~g~~~g~~Y~ 176 (231)
...+|+|.||+ |+++.+.|.+.....|.... ...|.. -+ +.++.... . -| |+ ...+....-+
T Consensus 49 ~~~~vLL~GppGtGKTtlAr~ia~~~~~~f~~l~a~~~~~~--~ir~~~~~a~~~~~~~~~~iLf--IDEI~~l~~~~q~ 124 (447)
T 3pvs_A 49 HLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVK--EIREAIERARQNRNAGRRTILF--VDEVHRFNKSQQD 124 (447)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCHH--HHHHHHHHHHHHHHTTCCEEEE--EETTTCC------
T ss_pred CCcEEEEECCCCCcHHHHHHHHHHHhCCCeEEEEeccCCHH--HHHHHHHHHHHhhhcCCCcEEE--EeChhhhCHHHHH
Confidence 34679999999 99999999887655553221 111321 22 22322211 1 12 22 1112112225
Q ss_pred HHHHHHHhcCCCCCCCcEEEEEe---cHH--HHHHHHHcCCCcEEEEEcCCCHHHHhh
Q psy10229 177 KVKEVIQEQSGPSIWGKHCILDV---SGN--AIKRLQVASLYPVAIFIKPKSVESIIC 229 (231)
Q Consensus 177 sV~~v~~~~~~~~~wGk~cILDv---~~q--gvk~Lr~~~~~PivIFI~ppS~e~L~~ 229 (231)
.+...++. |.+.++=. ++. -...|... ..++.+.|++.+++.+
T Consensus 125 ~LL~~le~-------~~v~lI~att~n~~~~l~~aL~sR---~~v~~l~~l~~edi~~ 172 (447)
T 3pvs_A 125 AFLPHIED-------GTITFIGATTENPSFELNSALLSR---ARVYLLKSLSTEDIEQ 172 (447)
T ss_dssp CCHHHHHT-------TSCEEEEEESSCGGGSSCHHHHTT---EEEEECCCCCHHHHHH
T ss_pred HHHHHHhc-------CceEEEecCCCCcccccCHHHhCc---eeEEeeCCcCHHHHHH
Confidence 56677777 77665532 221 12334433 3366689999888764
No 275
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=35.83 E-value=28 Score=26.56 Aligned_cols=22 Identities=9% Similarity=0.175 Sum_probs=18.6
Q ss_pred ceEEEECCC---hHHHHHHHHhhCC
Q psy10229 113 RPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
..|+|.||+ |+|+.+.|.+...
T Consensus 4 ~~I~i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 4 KVVVVTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578999999 9999999987544
No 276
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=35.28 E-value=29 Score=28.55 Aligned_cols=32 Identities=9% Similarity=-0.020 Sum_probs=19.2
Q ss_pred eeeeccCCCCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 103 PVTQMQIDYARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 103 ~V~~~~~~~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
.+..++...+..|.|+||+ |+|+.+.|.+...
T Consensus 13 ~~~~~~~~~~~iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 13 NHQQPNGGEPFLIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp --------CCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred HhhhccCCCcEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 3444444445568899999 9999999987543
No 277
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=34.94 E-value=24 Score=27.06 Aligned_cols=23 Identities=17% Similarity=0.320 Sum_probs=19.0
Q ss_pred CCceEEEECCC---hHHHHHHHHhhC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
..+.|+|+||+ |+++.+.|.+..
T Consensus 10 ~~~~i~i~G~~GsGKst~~~~l~~~~ 35 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGKELASKS 35 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCCHHHHHHHHHHHh
Confidence 34678999999 999999998764
No 278
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=34.58 E-value=40 Score=26.37 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=20.1
Q ss_pred cCCCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 108 QIDYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 108 ~~~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
+.....-|+|+|++ |++|.++|+...
T Consensus 25 ~~~~~~~i~v~G~~~~GKSslin~l~~~~ 53 (223)
T 4dhe_A 25 PPTVQPEIAFAGRSNAGKSTAINVLCNQK 53 (223)
T ss_dssp CCCCSCEEEEEESCHHHHHHHHHHHTTCS
T ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHhCCC
Confidence 33444558899999 999999998753
No 279
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=34.57 E-value=32 Score=26.13 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=18.4
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.+.|+|.||. |+|+.+.|.+.+
T Consensus 6 ~~~I~l~G~~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh
Confidence 4578999998 999999998754
No 280
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=34.57 E-value=11 Score=36.98 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=14.3
Q ss_pred CccCCCCccc-------------ccccccc
Q psy10229 34 NSIFSFPPIL-------------EWHGRKK 50 (231)
Q Consensus 34 gl~F~~gdil-------------~Wwqa~~ 50 (231)
-|+|++|||+ +||.+..
T Consensus 592 ~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~ 621 (655)
T 3pvl_A 592 FLSFAKGDLIILDHDTGEQVMNSGWANGIN 621 (655)
T ss_dssp BCCCCTTCEEEESSCCHHHHHHSSEEEEEE
T ss_pred cccccCCCEEEEccccCcccCCCCeEEEEe
Confidence 4699999999 4999874
No 281
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=34.25 E-value=28 Score=25.40 Aligned_cols=20 Identities=25% Similarity=0.419 Sum_probs=17.1
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|+. |++|.++|....
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~~ 25 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLKKR 25 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 37889998 999999999764
No 282
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=34.07 E-value=30 Score=28.13 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=16.3
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 39 kVvlvG~~~vGKSSLl~r~~~~ 60 (211)
T 2g3y_A 39 RVVLIGEQGVGKSTLANIFAGV 60 (211)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 47899998 99999999853
No 283
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=33.97 E-value=25 Score=31.31 Aligned_cols=25 Identities=20% Similarity=0.406 Sum_probs=22.7
Q ss_pred CceEEEECCC--hHHHHHHHHhhCCCC
Q psy10229 112 ARPVIILGPL--KDRINDDLISEFPEQ 136 (231)
Q Consensus 112 ~RpVVL~GPs--k~~l~~~Ll~~~P~~ 136 (231)
.+||+|+|.. .+|+.++|+..+|+.
T Consensus 91 ~~PIFI~G~PRSGTTlL~~lL~~hp~~ 117 (384)
T 2zq5_A 91 KRPIFVTGLVRTGTTALHRLLGADPAH 117 (384)
T ss_dssp CSCEEEECCTTSSHHHHHHHHTTSTTE
T ss_pred CCCeEEeCCCCCchHHHHHHHccCccc
Confidence 6899999988 899999999999974
No 284
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=32.56 E-value=26 Score=28.03 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=19.3
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|+|+||+ |+|+.+.|.+.+.
T Consensus 5 ~~~I~l~G~~GsGKsT~~~~La~~l~ 30 (222)
T 1zak_A 5 PLKVMISGAPASGKGTQCELIKTKYQ 30 (222)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3568999999 9999999988754
No 285
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=32.19 E-value=31 Score=28.26 Aligned_cols=18 Identities=17% Similarity=0.416 Sum_probs=15.8
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|||+|.+ |++|+.+++..
T Consensus 16 ivlvGd~~VGKTsLi~r~~~~ 36 (216)
T 4dkx_A 16 LVFLGEQSVGKTSLITRFMYD 36 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECcCCcCHHHHHHHHHhC
Confidence 7889998 99999999863
No 286
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=31.50 E-value=37 Score=25.19 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=19.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
...++|+|.||. |+++.+.+....
T Consensus 41 ~~~~~~ll~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 41 RTKNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SSSCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCceEEECCCCCCHHHHHHHHHHHH
Confidence 446789999999 999988887753
No 287
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=31.38 E-value=22 Score=26.57 Aligned_cols=23 Identities=9% Similarity=0.203 Sum_probs=16.6
Q ss_pred ccCCCCCCCCCCCCCccCCCCccc
Q psy10229 20 FDRKNSYLPMNPGLNSIFSFPPIL 43 (231)
Q Consensus 20 ~~~~~~~~p~~~~~gl~F~~gdil 43 (231)
|++...+..+. ++-|+++.|||.
T Consensus 20 Y~~t~~~~~tq-~~dl~l~~GdlV 42 (92)
T 1ug1_A 20 FQAERNFNAAQ-DLDVSLLEGDLV 42 (92)
T ss_dssp EEESSCCCCCS-SSCCCCCTTCEE
T ss_pred EEeccCcCCCC-ceeeeecCCCEE
Confidence 45555555554 678899999998
No 288
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=31.21 E-value=39 Score=25.47 Aligned_cols=23 Identities=26% Similarity=0.635 Sum_probs=18.9
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|+|+||+ |+|+.+.|.....
T Consensus 4 ~~~i~l~G~~GsGKSTl~~~La~~l~ 29 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGRQLAQQLN 29 (173)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhC
Confidence 3568999999 9999999987643
No 289
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=30.79 E-value=25 Score=27.16 Aligned_cols=18 Identities=28% Similarity=0.549 Sum_probs=15.6
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|+. |++|.++|+..
T Consensus 29 i~vvG~~~~GKSsLi~~l~~~ 49 (192)
T 2il1_A 29 VIIIGSRGVGKTSLMERFTDD 49 (192)
T ss_dssp EEEECSTTSSHHHHHHHHCC-
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 7899998 99999999864
No 290
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown function; HET: PLM; 2.60A {Mycobacterium avium}
Probab=30.03 E-value=22 Score=32.06 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=23.6
Q ss_pred CCceEEEECCC--hHHHHHHHHhhCCCCc
Q psy10229 111 YARPVIILGPL--KDRINDDLISEFPEQF 137 (231)
Q Consensus 111 ~~RpVVL~GPs--k~~l~~~Ll~~~P~~F 137 (231)
-.+||+|+|.. .+|+..+|+..+|+..
T Consensus 105 i~~PIFIvG~PRSGTTlL~~lL~~hp~~~ 133 (414)
T 2z6v_A 105 VERPLIVLGMPRTGTTVISYLLDQDPARR 133 (414)
T ss_dssp CCSCEEEEESTTSCCHHHHHHHTTCTTEE
T ss_pred cCCCeEEeCCCCCchHHHHHHHccCCCcC
Confidence 36899999988 8999999999999754
No 291
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=29.86 E-value=24 Score=27.67 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=18.0
Q ss_pred eEEEECCC---hHHHHHHHHhhCC
Q psy10229 114 PVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~P 134 (231)
.|+|.||+ |+|+.++|.+.++
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l~ 25 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAFR 25 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Confidence 57899999 9999999988654
No 292
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=29.49 E-value=42 Score=26.44 Aligned_cols=24 Identities=13% Similarity=0.065 Sum_probs=19.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.....|+|+||+ |+||.+.|....
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~~La~~l 49 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLACALNQML 49 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 356788999999 999999887654
No 293
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=29.29 E-value=38 Score=32.34 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=17.0
Q ss_pred CceEEEECCC---hHHHHHHHHhh
Q psy10229 112 ARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
...|+|.|++ |+|+.+.|.+.
T Consensus 396 ~~~I~l~GlsGSGKSTiA~~La~~ 419 (573)
T 1m8p_A 396 GFTIFLTGYMNSGKDAIARALQVT 419 (573)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHH
T ss_pred ceEEEeecCCCCCHHHHHHHHHHH
Confidence 3457889998 99999988775
No 294
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=29.27 E-value=38 Score=27.02 Aligned_cols=22 Identities=14% Similarity=0.034 Sum_probs=18.3
Q ss_pred ceEEEECCC---hHHHHHHHHhhCC
Q psy10229 113 RPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
+.++|+||+ |+|+.++|+...+
T Consensus 7 ~~i~i~G~sGsGKTTl~~~l~~~l~ 31 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLKKLIPALC 31 (174)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcc
Confidence 467899999 9999999987643
No 295
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=28.95 E-value=37 Score=24.62 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 5 ~i~v~G~~~~GKSsli~~l~~~ 26 (167)
T 1kao_A 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889998 99999999874
No 296
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=28.74 E-value=49 Score=24.76 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=17.1
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
--|+|+|+. |++|+++|+..
T Consensus 8 ~ki~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 8 YKTVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 347889998 99999999985
No 297
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=28.59 E-value=36 Score=25.54 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|...
T Consensus 4 ~~v~lvG~~gvGKStL~~~l~~~ 26 (165)
T 2wji_A 4 YEIALIGNPNVGKSTIFNALTGE 26 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHHCC
T ss_pred cEEEEECCCCCCHHHHHHHHhCC
Confidence 347899999 99999999864
No 298
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=28.45 E-value=52 Score=24.51 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=16.6
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 9 ki~~vG~~~vGKTsli~~l~~~ 30 (178)
T 2iwr_A 9 RLGVLGDARSGKSSLIHRFLTG 30 (178)
T ss_dssp EEEEECCGGGCHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 47899998 99999999975
No 299
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=28.13 E-value=43 Score=24.82 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=16.9
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|+. |++|.++|+...
T Consensus 9 ~i~v~G~~~~GKSsli~~l~~~~ 31 (177)
T 1wms_A 9 KVILLGDGGVGKSSLMNRYVTNK 31 (177)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 37889998 999999998753
No 300
>2qi2_A Pelota, cell division protein pelota related protein; DOM34, cell cycle; 2.90A {Thermoplasma acidophilum} SCOP: b.38.4.1 c.55.4.2 d.79.3.2
Probab=28.10 E-value=1.4e+02 Score=26.64 Aligned_cols=26 Identities=31% Similarity=0.432 Sum_probs=22.2
Q ss_pred ceEEEECCC--hHHHHHHHHhhCCCCcc
Q psy10229 113 RPVIILGPL--KDRINDDLISEFPEQFG 138 (231)
Q Consensus 113 RpVVL~GPs--k~~l~~~Ll~~~P~~F~ 138 (231)
++|||.||. |+.+.+.|..+.+.++.
T Consensus 190 ~~lIlaGPg~~k~~f~~~l~~~~~~~i~ 217 (347)
T 2qi2_A 190 NSIIILGPGFARDRFARYCAQRGVNVIG 217 (347)
T ss_dssp SCEEEEESSSHHHHHHHHHHHTSCCCSC
T ss_pred CeEEEECCHHHHHHHHHHHHHhhcceEE
Confidence 999999999 99998888877777664
No 301
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=27.67 E-value=38 Score=25.01 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|...
T Consensus 6 ki~i~G~~~vGKSsl~~~l~~~ 27 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLASLFAGK 27 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCccHHHHHHHHhcC
Confidence 37889998 99999999864
No 302
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=27.61 E-value=41 Score=24.56 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=16.0
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|+. |++|.++|+..
T Consensus 6 i~v~G~~~~GKssli~~l~~~ 26 (170)
T 1ek0_A 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 7889998 99999999875
No 303
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=27.47 E-value=44 Score=26.04 Aligned_cols=22 Identities=14% Similarity=0.149 Sum_probs=18.5
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
++.|+|.|++ |+|+.+.|.+..
T Consensus 10 ~~~I~l~G~~GsGKST~~~~L~~~l 34 (212)
T 2wwf_A 10 GKFIVFEGLDRSGKSTQSKLLVEYL 34 (212)
T ss_dssp SCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 4678999998 999999998753
No 304
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=27.31 E-value=41 Score=24.53 Aligned_cols=19 Identities=11% Similarity=0.218 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 7 ~i~v~G~~~~GKssl~~~l~~~ 28 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQRYCKG 28 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 47889998 99999999874
No 305
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=27.27 E-value=33 Score=25.77 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=17.2
Q ss_pred CceEEEECCC---hHHHHHHHHhh
Q psy10229 112 ARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..-|+|+|+. |++|.++|+..
T Consensus 6 ~~ki~~~G~~~~GKSsli~~l~~~ 29 (181)
T 3t5g_A 6 SRKIAILGYRSVGKSSLTIQFVEG 29 (181)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEEECcCCCCHHHHHHHHHcC
Confidence 3457889998 99999999953
No 306
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=27.10 E-value=47 Score=24.70 Aligned_cols=24 Identities=25% Similarity=0.282 Sum_probs=19.4
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
...++|+|.||. |+++.+.+.+..
T Consensus 41 ~~~~~vll~G~~G~GKT~la~~~~~~~ 67 (187)
T 2p65_A 41 RTKNNPILLGDPGVGKTAIVEGLAIKI 67 (187)
T ss_dssp SSSCEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CCCCceEEECCCCCCHHHHHHHHHHHH
Confidence 446789999998 999988887754
No 307
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=27.08 E-value=45 Score=26.59 Aligned_cols=31 Identities=10% Similarity=0.071 Sum_probs=19.9
Q ss_pred eeeeeccC--CCCceEEEECCC---hHHHHHHHHhh
Q psy10229 102 EPVTQMQI--DYARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 102 e~V~~~~~--~~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..+.++|. ....-|+|+|++ |++|.++|+..
T Consensus 17 ~~~~~~P~~~~~~~kI~vvG~~~vGKSsLin~l~~~ 52 (228)
T 2qu8_A 17 LYFQGLPSINPHKKTIILSGAPNVGKSSFMNIVSRA 52 (228)
T ss_dssp -----CCSCCTTSEEEEEECSTTSSHHHHHHHHTTT
T ss_pred heeccCCCCCCCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 34445554 334557899998 99999999875
No 308
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=26.81 E-value=42 Score=25.12 Aligned_cols=20 Identities=15% Similarity=0.122 Sum_probs=16.8
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|+..
T Consensus 12 ~ki~v~G~~~~GKSsli~~l~~~ 34 (195)
T 3bc1_A 12 IKFLALGDSGVGKTSVLYQYTDG 34 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 347889998 99999999874
No 309
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=26.63 E-value=42 Score=24.85 Aligned_cols=20 Identities=30% Similarity=0.448 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|+..
T Consensus 9 ~~i~v~G~~~~GKSsli~~l~~~ 31 (182)
T 1ky3_A 9 LKVIILGDSGVGKTSLMHRYVND 31 (182)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 347889998 99999999875
No 310
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=26.61 E-value=58 Score=30.56 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=29.6
Q ss_pred HHHHHHhccCceeEEeccC-CccchHHHHHHHhcCCCCCC
Q psy10229 153 KMEQEFGEFFTAVVQGDMP-EDIYQKVKEVIQEQSGPSIW 191 (231)
Q Consensus 153 ~fe~~i~~~Fd~iE~g~~~-g~~Y~sV~~v~~~~~~~~~w 191 (231)
++|......||.+-.+.-. ...|+.|++++.+++++++|
T Consensus 340 ~~e~~~~~~fD~vIvNddl~d~a~~~L~~ii~~~~~~~~W 379 (468)
T 3shw_A 340 KLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVW 379 (468)
T ss_dssp HHHHHHGGGCSEEEECBTTBCHHHHHHHHHHHHHHTSCEE
T ss_pred HHHHhhhccCCEEEECCCcHHHHHHHHHHHHHHhcCCCEE
Confidence 4555555577777776555 46789999999999999999
No 311
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=26.36 E-value=47 Score=25.19 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=18.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
+..|+|.||. |+|+.+.|.+.+
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKY 27 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 3568899998 999999998754
No 312
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=26.31 E-value=41 Score=25.36 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=17.2
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|...
T Consensus 8 ~~i~lvG~~gvGKStL~~~l~~~ 30 (188)
T 2wjg_A 8 YEIALIGNPNVGKSTIFNALTGE 30 (188)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 457899998 99999999874
No 313
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=26.18 E-value=14 Score=32.13 Aligned_cols=18 Identities=0% Similarity=-0.282 Sum_probs=0.0
Q ss_pred CCccCCCCccc--------ccccccc
Q psy10229 33 LNSIFSFPPIL--------EWHGRKK 50 (231)
Q Consensus 33 ~gl~F~~gdil--------~Wwqa~~ 50 (231)
-.|+|+.|||+ .||.+..
T Consensus 264 ~ELs~~~Gd~i~v~~~~~~~ww~g~~ 289 (308)
T 3qwy_A 264 TQLRVKKGQTVLVTQKMSNGMYKAEL 289 (308)
T ss_dssp --------------------------
T ss_pred ccceeCCCCEEEEEEEcCCCcEEEEE
Confidence 35699999999 4996654
No 314
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=26.18 E-value=45 Score=24.32 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=16.3
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1r2q_A 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889998 99999999864
No 315
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=26.12 E-value=44 Score=24.42 Aligned_cols=20 Identities=25% Similarity=0.303 Sum_probs=17.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|+. |++|.++|+...
T Consensus 8 ~i~v~G~~~~GKSsli~~l~~~~ 30 (170)
T 1z0j_A 8 KVCLLGDTGVGKSSIMWRFVEDS 30 (170)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHcCC
Confidence 37889998 999999999764
No 316
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=26.11 E-value=26 Score=25.82 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=15.5
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|++ |++|.++|...
T Consensus 5 i~~vG~~~~GKSsli~~l~~~ 25 (166)
T 3q72_A 5 VLLLGAPGVGKSALARIFGGV 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHcCc
Confidence 6788988 99999999754
No 317
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=25.66 E-value=46 Score=24.22 Aligned_cols=19 Identities=16% Similarity=0.403 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 5 ki~v~G~~~~GKssli~~l~~~ 26 (167)
T 1c1y_A 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889998 99999999874
No 318
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=25.60 E-value=53 Score=28.60 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=22.7
Q ss_pred Cce-EEEECCC--hHHHHHHHHhhCCCCcc
Q psy10229 112 ARP-VIILGPL--KDRINDDLISEFPEQFG 138 (231)
Q Consensus 112 ~Rp-VVL~GPs--k~~l~~~Ll~~~P~~F~ 138 (231)
.+| |+|+|.. .+|+...++..+|+.+.
T Consensus 45 ~~P~ifIvG~pRSGTTlL~~~L~~hp~i~~ 74 (337)
T 3ap1_A 45 AMPLIFVGGVPRSGTTLMRAMLDAHPEVRC 74 (337)
T ss_dssp TSCCEEEECSSSSSHHHHHHHHHTSTTEEC
T ss_pred CCCCEEEECCCCChHHHHHHHHhcCCCCcC
Confidence 455 8888888 89999999999999763
No 319
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=25.47 E-value=54 Score=25.59 Aligned_cols=22 Identities=9% Similarity=0.320 Sum_probs=18.7
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..++|+|.||. |+++.+.|...
T Consensus 51 ~~~~~ll~G~~G~GKT~la~~l~~~ 75 (242)
T 3bos_A 51 GVQAIYLWGPVKSGRTHLIHAACAR 75 (242)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHH
Confidence 56899999999 99998888765
No 320
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=25.46 E-value=46 Score=24.39 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 8 ~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1z08_A 8 KVVLLGEGCVGKTSLVLRYCEN 29 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 47889998 99999999865
No 321
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=25.44 E-value=47 Score=24.05 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 6 ~i~v~G~~~~GKssl~~~l~~~ 27 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 47889998 99999999875
No 322
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=25.37 E-value=45 Score=24.37 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~ 26 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVLRFVKG 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889998 99999999874
No 323
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=25.31 E-value=52 Score=28.10 Aligned_cols=22 Identities=18% Similarity=0.218 Sum_probs=18.2
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..+.|+|.||. |+++.+.+.+.
T Consensus 44 ~~~~vll~G~~G~GKT~la~~l~~~ 68 (384)
T 2qby_B 44 VKFSNLFLGLTGTGKTFVSKYIFNE 68 (384)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHH
Confidence 45679999999 99998888765
No 324
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=25.28 E-value=49 Score=24.54 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=16.3
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|...
T Consensus 8 ki~v~G~~~~GKssl~~~l~~~ 29 (178)
T 2hxs_A 8 KIVVLGDGASGKTSLTTCFAQE 29 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHGG
T ss_pred EEEEECcCCCCHHHHHHHHHhC
Confidence 37889998 99999999864
No 325
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=25.27 E-value=42 Score=24.54 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=16.3
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 5 ~i~v~G~~~~GKssli~~l~~~ 26 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLVRFVED 26 (170)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHhC
Confidence 37889998 99999999864
No 326
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=24.94 E-value=51 Score=24.07 Aligned_cols=19 Identities=21% Similarity=0.130 Sum_probs=16.4
Q ss_pred EEEECCC---hHHHHHHHHhhC
Q psy10229 115 VIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~~ 133 (231)
|+|+|++ |++|.++|....
T Consensus 3 i~~~G~~~~GKssl~~~l~~~~ 24 (164)
T 1r8s_A 3 ILMVGLDAAGKTTILYKLKLGE 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6889998 999999998753
No 327
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=24.78 E-value=47 Score=25.70 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=17.1
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+||+ |++|.++|...
T Consensus 6 ~kv~lvG~~g~GKSTLl~~l~~~ 28 (199)
T 2f9l_A 6 FKVVLIGDSGVGKSNLLSRFTRN 28 (199)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEEECcCCCCHHHHHHHHhcC
Confidence 347899999 99999999875
No 328
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=24.73 E-value=48 Score=25.24 Aligned_cols=20 Identities=15% Similarity=0.300 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|+++|+..
T Consensus 26 ~ki~v~G~~~~GKSsLi~~l~~~ 48 (193)
T 2oil_A 26 FKVVLIGESGVGKTNLLSRFTRN 48 (193)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred eEEEEECcCCCCHHHHHHHHhcC
Confidence 347889998 99999999875
No 329
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=24.60 E-value=44 Score=25.87 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=17.5
Q ss_pred ceEEEECCC---hHHHHHHHHhhC
Q psy10229 113 RPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.-|+|+||+ |++|.++|....
T Consensus 30 ~kv~lvG~~g~GKSTLl~~l~~~~ 53 (191)
T 1oix_A 30 FKVVLIGDSGVGKSNLLSRFTRNE 53 (191)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHSC
T ss_pred eEEEEECcCCCCHHHHHHHHhcCC
Confidence 347899999 999999998753
No 330
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=24.58 E-value=48 Score=24.76 Aligned_cols=18 Identities=22% Similarity=0.469 Sum_probs=16.0
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|+. |++|.++|+..
T Consensus 7 i~v~G~~~~GKSsli~~l~~~ 27 (189)
T 4dsu_A 7 LVVVGADGVGKSALTIQLIQN 27 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 7889998 99999999874
No 331
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=24.55 E-value=50 Score=24.37 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=16.2
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 16 ~i~v~G~~~~GKssli~~l~~~ 37 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLITRFMYD 37 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37888998 99999999864
No 332
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=24.54 E-value=57 Score=25.14 Aligned_cols=20 Identities=20% Similarity=0.198 Sum_probs=17.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|++ |++|.++|....
T Consensus 25 ki~~vG~~~vGKSsli~~l~~~~ 47 (190)
T 1m2o_B 25 KLLFLGLDNAGKTTLLHMLKNDR 47 (190)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 57889998 999999999753
No 333
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=24.48 E-value=48 Score=24.35 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=15.6
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|++ |++|.++|...
T Consensus 5 i~ivG~~~~GKSsli~~l~~~ 25 (169)
T 3q85_A 5 VMLVGESGVGKSTLAGTFGGL 25 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhc
Confidence 7889999 99999999753
No 334
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=24.39 E-value=39 Score=27.65 Aligned_cols=19 Identities=32% Similarity=0.466 Sum_probs=16.3
Q ss_pred EEEECCC---hHHHHHHHHhhC
Q psy10229 115 VIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~~ 133 (231)
|||+||. |+|+.++|.+.+
T Consensus 3 Iil~GpPGsGKgTqa~~La~~~ 24 (206)
T 3sr0_A 3 LVFLGPPGAGKGTQAKRLAKEK 24 (206)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6788998 999999999864
No 335
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=24.24 E-value=66 Score=24.93 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|+..
T Consensus 8 ~ki~vvG~~~~GKTsli~~l~~~ 30 (214)
T 2fh5_B 8 RAVLFVGLCDSGKTLLFVRLLTG 30 (214)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 457889998 99999999874
No 336
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=24.17 E-value=56 Score=25.89 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=19.8
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
.....|.|+||+ |+||.+.|....+
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~~l~~~~~ 47 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSNPLAAALS 47 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 345678899999 9999998877643
No 337
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=24.12 E-value=51 Score=24.16 Aligned_cols=20 Identities=30% Similarity=0.215 Sum_probs=16.8
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|...
T Consensus 8 ~~i~v~G~~~~GKssl~~~l~~~ 30 (171)
T 1upt_A 8 MRILILGLDGAGKTTILYRLQVG 30 (171)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred cEEEEECCCCCCHHHHHHHHhcC
Confidence 347889998 99999999864
No 338
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=24.02 E-value=55 Score=26.22 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=19.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|+|+||. |+|+.+.|.+.+.
T Consensus 7 ~~~I~l~G~~GsGKsT~a~~La~~l~ 32 (227)
T 1zd8_A 7 LLRAVIMGAPGSGKGTVSSRITTHFE 32 (227)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHSS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 3568999999 9999999987654
No 339
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=23.97 E-value=51 Score=24.49 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|+..
T Consensus 19 ~ki~v~G~~~~GKSsli~~l~~~ 41 (187)
T 2a9k_A 19 HKVIMVGSGGVGKSALTLQFMYD 41 (187)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhhC
Confidence 347889998 99999999874
No 340
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=23.91 E-value=53 Score=24.66 Aligned_cols=25 Identities=24% Similarity=0.223 Sum_probs=19.2
Q ss_pred ceEEEECCC---hHHHHHHHHhhCCCCc
Q psy10229 113 RPVIILGPL---KDRINDDLISEFPEQF 137 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~P~~F 137 (231)
.-|+|+|++ |++|.+.|...++..+
T Consensus 15 ~ki~vvG~~~~GKssL~~~l~~~~~~~~ 42 (198)
T 3t1o_A 15 FKIVYYGPGLSGKTTNLKWIYSKVPEGR 42 (198)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHTSCGGG
T ss_pred cEEEEECCCCCCHHHHHHHHHhhccccc
Confidence 347899998 9999988877666543
No 341
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=23.89 E-value=56 Score=24.61 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=18.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
..-|+|+|+. |++|.++|....
T Consensus 18 ~~~i~v~G~~~~GKssl~~~l~~~~ 42 (186)
T 1ksh_A 18 ELRLLMLGLDNAGKTTILKKFNGED 42 (186)
T ss_dssp CEEEEEECSTTSSHHHHHHHHTTCC
T ss_pred eeEEEEECCCCCCHHHHHHHHhcCC
Confidence 3457889998 999999998754
No 342
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=23.83 E-value=52 Score=24.44 Aligned_cols=20 Identities=15% Similarity=0.145 Sum_probs=16.8
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|++ |++|.++|+...
T Consensus 12 ~i~v~G~~~~GKssli~~l~~~~ 34 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKDGA 34 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECcCCCCHHHHHHHHHhCC
Confidence 37889998 999999998753
No 343
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=23.80 E-value=70 Score=28.38 Aligned_cols=39 Identities=31% Similarity=0.610 Sum_probs=28.7
Q ss_pred HHHHHHhccCceeE-EeccCCccchHHHHHHHhcCCCCCC
Q psy10229 153 KMEQEFGEFFTAVV-QGDMPEDIYQKVKEVIQEQSGPSIW 191 (231)
Q Consensus 153 ~fe~~i~~~Fd~iE-~g~~~g~~Y~sV~~v~~~~~~~~~w 191 (231)
++|......||.+. ...-....|..+++++.++++.++|
T Consensus 257 eiE~~~~~~FD~vI~VNDdle~A~~~L~~iI~~~~~epqW 296 (308)
T 3kfv_A 257 KLRKHSSHLFTATIPLNGTSDTWYQELKAIIREQQTRPIW 296 (308)
T ss_dssp HHHHHHGGGCSEEEEECSSSTHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHhhhccCcEEEEcCCCHHHHHHHHHHHHHHhcCCCeE
Confidence 45544444677676 5655566789999999999999999
No 344
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=23.73 E-value=51 Score=24.92 Aligned_cols=19 Identities=11% Similarity=0.261 Sum_probs=16.6
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
=|+|+|+. |++|.++|+..
T Consensus 18 ki~v~G~~~~GKSsli~~l~~~ 39 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFADD 39 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 37889999 99999999974
No 345
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=23.60 E-value=51 Score=25.35 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
=|+|+|++ |++|.++|+..
T Consensus 22 ki~ivG~~~vGKSsL~~~~~~~ 43 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVHRYLTG 43 (184)
T ss_dssp EEEEECCTTSCHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 47889998 99999999874
No 346
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=23.49 E-value=44 Score=25.69 Aligned_cols=22 Identities=18% Similarity=0.410 Sum_probs=18.1
Q ss_pred eEEEECCC---hHHHHHHHHhhCCC
Q psy10229 114 PVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
.|+|.||+ |+|+.+.|.+....
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~~ 26 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLGY 26 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHCC
T ss_pred EEEEECCCccCHHHHHHHHHHhcCC
Confidence 47899999 99999999886543
No 347
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=23.45 E-value=53 Score=24.18 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|...
T Consensus 16 ~~i~v~G~~~~GKSsli~~l~~~ 38 (179)
T 1z0f_A 16 FKYIIIGDMGVGKSCLLHQFTEK 38 (179)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 447889998 99999999875
No 348
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=23.32 E-value=49 Score=23.83 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=15.9
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+++|+. |++|.++|...
T Consensus 6 i~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 7888988 99999999875
No 349
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=23.30 E-value=67 Score=24.32 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=17.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
-|+|+|++ |++|.++|....
T Consensus 6 ki~ivG~~g~GKStLl~~l~~~~ 28 (172)
T 2gj8_A 6 KVVIAGRPNAGKSSLLNALAGRE 28 (172)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47899998 999999998753
No 350
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=23.28 E-value=61 Score=25.15 Aligned_cols=21 Identities=14% Similarity=0.338 Sum_probs=18.0
Q ss_pred ceEEEECCC---hHHHHHHHHhhC
Q psy10229 113 RPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
++|+|.||. |+++...|....
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~ 78 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANEL 78 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 899999999 999988887653
No 351
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=22.92 E-value=55 Score=24.15 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=17.1
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|+..
T Consensus 10 ~~i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 10 HKLVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 457889998 99999999875
No 352
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=22.92 E-value=48 Score=25.27 Aligned_cols=20 Identities=15% Similarity=0.469 Sum_probs=17.2
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.|+|+||+ |+||.+.|.+..
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l 28 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDL 28 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHc
Confidence 58899999 999999998764
No 353
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=22.86 E-value=1.5e+02 Score=27.88 Aligned_cols=106 Identities=14% Similarity=0.137 Sum_probs=55.8
Q ss_pred CCCCceEEEECCC---hHHHHHHHHhhCCCCccc--------ccCCCCCcchhHHHHHHHHh--ccCceeEEeccCCccc
Q psy10229 109 IDYARPVIILGPL---KDRINDDLISEFPEQFGS--------CVPPLGKMYDRSMKMEQEFG--EFFTAVVQGDMPEDIY 175 (231)
Q Consensus 109 ~~~~RpVVL~GPs---k~~l~~~Ll~~~P~~F~~--------~vp~TG~dY~FVe~fe~~i~--~~Fd~iE~g~~~g~~Y 175 (231)
+.+.|-|.|+|.. |+||.++|+-.-- .... ....|--||.- +|-++.|. .....++|..+.=|+.
T Consensus 28 ~~r~RNiaIiaHvdaGKTTLtE~lL~~tG-~i~~~G~V~~~~~~~~~~~D~~~-~EreRGITI~s~~~~~~~~~~~iNlI 105 (548)
T 3vqt_A 28 AARRRTFAIISHPDAGKTTLTEKLLLFGG-AIQMAGSVKARKAARHATSDWMA-MERERGISVTTSVMQFPYRDRVVNLL 105 (548)
T ss_dssp HHTEEEEEEECCTTSSHHHHHHHHHHHTT-CHHHHHHHHHC---------------------CTTTEEEEEETTEEEEEE
T ss_pred ccccceEEEEeCCCCCHHHHHHHHHHhcC-cccccceeecCccccccccCChH-HHHHCCCcEeeceEEEEECCEEEEEE
Confidence 4578999999887 9999999985321 1100 00011011111 22233332 1222356655433332
Q ss_pred ---------hHHHHHHHhcCCCCCCCcEEEEE----ecHHHHHHHHHcC--CCcEEEEEcC
Q psy10229 176 ---------QKVKEVIQEQSGPSIWGKHCILD----VSGNAIKRLQVAS--LYPVAIFIKP 221 (231)
Q Consensus 176 ---------~sV~~v~~~~~~~~~wGk~cILD----v~~qgvk~Lr~~~--~~PivIFI~p 221 (231)
..|...+... .|-++|+| |.+|....++.+. --|+++||.=
T Consensus 106 DTPGHvDF~~Ev~raL~~~-----DgAvlVvda~~GV~~qT~~v~~~a~~~~lp~i~fINK 161 (548)
T 3vqt_A 106 DTPGHQDFSEDTYRVLTAV-----DSALVVIDAAKGVEAQTRKLMDVCRMRATPVMTFVNK 161 (548)
T ss_dssp CCCCGGGCSHHHHHHHHSC-----SEEEEEEETTTBSCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eCCCcHHHHHHHHHHHHhc-----CceEEEeecCCCcccccHHHHHHHHHhCCceEEEEec
Confidence 5566666653 27777887 5888888887653 3488899964
No 354
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=22.82 E-value=58 Score=27.38 Aligned_cols=24 Identities=25% Similarity=0.286 Sum_probs=20.4
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
..+.|+|+||+ |+++...|.+...
T Consensus 33 ~g~~ilI~GpsGsGKStLA~~La~~g~ 59 (205)
T 2qmh_A 33 YGLGVLITGDSGVGKSETALELVQRGH 59 (205)
T ss_dssp TTEEEEEECCCTTTTHHHHHHHHTTTC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 46789999999 9999999988644
No 355
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=22.70 E-value=56 Score=24.29 Aligned_cols=19 Identities=16% Similarity=0.466 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 14 ki~v~G~~~~GKSsli~~l~~~ 35 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVKD 35 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 47889998 99999999875
No 356
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=22.70 E-value=55 Score=25.63 Aligned_cols=24 Identities=17% Similarity=0.109 Sum_probs=18.8
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
....|.|+||+ |+|+.+.|....+
T Consensus 5 ~~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 5 KPFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34568899999 9999998877543
No 357
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=22.69 E-value=23 Score=27.23 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=3.8
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|+..
T Consensus 22 ~i~v~G~~~~GKssli~~l~~~ 43 (208)
T 2yc2_C 22 KVAVVGEATVGKSALISMFTSK 43 (208)
T ss_dssp EEEEC-----------------
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 47889998 99999999875
No 358
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=22.56 E-value=46 Score=30.14 Aligned_cols=40 Identities=25% Similarity=0.453 Sum_probs=28.6
Q ss_pred HHHHHHHhccCceeEEeccCC-ccchHHHHHHHhcCCCCCC
Q psy10229 152 MKMEQEFGEFFTAVVQGDMPE-DIYQKVKEVIQEQSGPSIW 191 (231)
Q Consensus 152 e~fe~~i~~~Fd~iE~g~~~g-~~Y~sV~~v~~~~~~~~~w 191 (231)
+++|....+.||.+-.+.-.. ..|+.+++++.+++++++|
T Consensus 347 ~~~e~~~~~~fd~vivNd~l~~~a~~~l~~ii~~~~~~~~W 387 (391)
T 3tsz_A 347 HKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVW 387 (391)
T ss_dssp HHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHHHHHSEEE
T ss_pred HHHHHhccccCcEEEECCCcHHHHHHHHHHHHHHhcCCCee
Confidence 345555555777677666555 4788999999888888888
No 359
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=22.55 E-value=56 Score=24.60 Aligned_cols=19 Identities=16% Similarity=0.347 Sum_probs=16.6
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 17 ~i~v~G~~~~GKssli~~l~~~ 38 (195)
T 1x3s_A 17 KILIIGESGVGKSSLLLRFTDD 38 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 47889998 99999999875
No 360
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=22.54 E-value=44 Score=24.73 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=16.3
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 11 ~i~v~G~~~~GKssl~~~l~~~ 32 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLLRFADN 32 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHCSC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 47889998 99999999864
No 361
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=22.43 E-value=56 Score=24.83 Aligned_cols=20 Identities=15% Similarity=0.258 Sum_probs=16.9
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|++ |++|.++|+..
T Consensus 21 ~ki~v~G~~~~GKSsli~~l~~~ 43 (189)
T 1z06_A 21 FKIIVIGDSNVGKTCLTYRFCAG 43 (189)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHcC
Confidence 457889998 99999999864
No 362
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=22.36 E-value=83 Score=23.20 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=17.5
Q ss_pred CceEEEECCC---hHHHHHHHHhh
Q psy10229 112 ARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..-|+|+|++ |++|.++|+..
T Consensus 8 ~~~i~v~G~~~~GKssl~~~l~~~ 31 (178)
T 2lkc_A 8 PPVVTIMGHVDHGKTTLLDAIRHS 31 (178)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 4457889998 99999999874
No 363
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=22.33 E-value=57 Score=24.79 Aligned_cols=20 Identities=10% Similarity=0.145 Sum_probs=17.1
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|+..
T Consensus 23 ~ki~vvG~~~~GKSsli~~l~~~ 45 (189)
T 2gf9_A 23 FKLLLIGNSSVGKTSFLFRYADD 45 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 457889998 99999999875
No 364
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=22.25 E-value=56 Score=24.75 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
..-|+|+|++ |++|.++|....
T Consensus 48 ~~~i~vvG~~g~GKSsll~~l~~~~ 72 (193)
T 2ged_A 48 QPSIIIAGPQNSGKTSLLTLLTTDS 72 (193)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHSS
T ss_pred CCEEEEECCCCCCHHHHHHHHhcCC
Confidence 3457889998 999999999753
No 365
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=22.20 E-value=68 Score=25.74 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=21.0
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhCCC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEFPE 135 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~P~ 135 (231)
..+++|+|.||+ |+++.+.|......
T Consensus 37 ~~~~~vll~G~~GtGKT~la~~la~~~~~ 65 (262)
T 2qz4_A 37 KVPKGALLLGPPGCGKTLLAKAVATEAQV 65 (262)
T ss_dssp CCCCEEEEESCTTSSHHHHHHHHHHHHTC
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHhCC
Confidence 456889999999 99999988876443
No 366
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=22.16 E-value=53 Score=25.06 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=17.0
Q ss_pred eEEEECCC---hHHHHHHHHhhC
Q psy10229 114 PVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~~ 133 (231)
=|+|+|+. |++|.++|+...
T Consensus 25 ki~v~G~~~~GKSsli~~l~~~~ 47 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLFRYADDT 47 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhcCC
Confidence 47889988 999999999764
No 367
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=22.08 E-value=57 Score=24.86 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=16.8
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|+..
T Consensus 15 ~ki~v~G~~~~GKSsli~~l~~~ 37 (206)
T 2bov_A 15 HKVIMVGSGGVGKSALTLQFMYD 37 (206)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 347889998 99999999875
No 368
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=22.07 E-value=41 Score=26.62 Aligned_cols=25 Identities=16% Similarity=0.041 Sum_probs=19.3
Q ss_pred CCCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 109 IDYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 109 ~~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
......|.|+||+ |+|+.+.|....
T Consensus 19 ~~~~~~i~i~G~~GsGKstl~~~l~~~~ 46 (201)
T 1rz3_A 19 TAGRLVLGIDGLSRSGKTTLANQLSQTL 46 (201)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3445678899999 999999887643
No 369
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=21.88 E-value=58 Score=24.97 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
--|+|+|++ |++|.++|+..
T Consensus 22 ~ki~vvG~~~vGKTsLi~~l~~~ 44 (187)
T 3c5c_A 22 VNLAILGRRGAGKSALTVKFLTK 44 (187)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCcHHHHHHHHHhC
Confidence 347889998 99999999874
No 370
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=21.86 E-value=58 Score=24.94 Aligned_cols=20 Identities=30% Similarity=0.473 Sum_probs=17.0
Q ss_pred ceEEEECCC---hHHHHHHHHhh
Q psy10229 113 RPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.-|+|+|+. |++|.++|+..
T Consensus 9 ~ki~v~G~~~~GKSsli~~l~~~ 31 (207)
T 1vg8_A 9 LKVIILGDSGVGKTSLMNQYVNK 31 (207)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEECcCCCCHHHHHHHHHcC
Confidence 347889998 99999999875
No 371
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=21.74 E-value=53 Score=24.58 Aligned_cols=19 Identities=16% Similarity=0.399 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 12 ki~v~G~~~~GKSsli~~l~~~ 33 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIEK 33 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 47889998 99999999874
No 372
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=21.68 E-value=60 Score=24.77 Aligned_cols=19 Identities=21% Similarity=0.265 Sum_probs=16.6
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|...
T Consensus 23 ki~v~G~~~~GKSsli~~l~~~ 44 (191)
T 2a5j_A 23 KYIIIGDTGVGKSCLLLQFTDK 44 (191)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHhcC
Confidence 47889998 99999999875
No 373
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}
Probab=21.68 E-value=1.5e+02 Score=26.03 Aligned_cols=83 Identities=14% Similarity=0.273 Sum_probs=49.2
Q ss_pred CCCceEEEECCC--hHHHHHHHHhhCCCCcccc--cCCCCCcchhH------HHHHHHHhc-cCce---eEEeccCCccc
Q psy10229 110 DYARPVIILGPL--KDRINDDLISEFPEQFGSC--VPPLGKMYDRS------MKMEQEFGE-FFTA---VVQGDMPEDIY 175 (231)
Q Consensus 110 ~~~RpVVL~GPs--k~~l~~~Ll~~~P~~F~~~--vp~TG~dY~FV------e~fe~~i~~-~Fd~---iE~g~~~g~~Y 175 (231)
+.++-+||+|+. -+.+.+.|.+.. .+... |++. ||-- ++|.+.++. .|.. --+....|..|
T Consensus 161 Nsp~~~VisG~~~al~~~~~~l~~~g--~~~~~L~v~~a---fHS~~m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~ 235 (336)
T 3ptw_A 161 NSPGQIVISGELVALEKAMEFIKEVG--GRAIKLPVSAP---FHCSMLQPAAEKLEDELNKISINKLNGIVMSNVKGEAY 235 (336)
T ss_dssp EETTEEEEEEEHHHHHHHHHHHHHTT--CEEEECSCSSC---TTSGGGHHHHHHHHHHHTTSCCCCCCSEEEETTTTEEC
T ss_pred ecCCcEEEEcCHHHHHHHHHHHHhcC--CcEEECCCCCC---cccHHHHHHHHHHHHHHhcCCCCCCCceEEECCCCccc
Confidence 456778999988 455666665543 33222 3322 3321 677777777 6621 01222222211
Q ss_pred ---------------------hHHHHHHHhcCCCCCCCcEEEEEecHHHH
Q psy10229 176 ---------------------QKVKEVIQEQSGPSIWGKHCILDVSGNAI 204 (231)
Q Consensus 176 ---------------------~sV~~v~~~~~~~~~wGk~cILDv~~qgv 204 (231)
++|+.+.+. |-.++++|.|..+
T Consensus 236 ~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-------g~~~fvEiGP~~~ 278 (336)
T 3ptw_A 236 LEDDNIIELLTSQVKKPVLFINDIEKMIES-------GVDTFIEIGPGKA 278 (336)
T ss_dssp CTTSCHHHHHHHHTTSCBCHHHHHHHHHHT-------TCCEEEEESSCSH
T ss_pred CChhhHHHHHHHHhhcceeHHHHHHHHHhC-------CCCEEEEeCCcHH
Confidence 788888888 9999999999643
No 374
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=21.65 E-value=57 Score=25.04 Aligned_cols=19 Identities=16% Similarity=0.252 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 10 ki~v~G~~~~GKSsli~~l~~~ 31 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLFRYADD 31 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 47889998 99999999874
No 375
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=21.62 E-value=58 Score=24.37 Aligned_cols=19 Identities=11% Similarity=0.328 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 20 ki~v~G~~~~GKSsl~~~l~~~ 41 (183)
T 3kkq_A 20 KLVVVGDGGVGKSALTIQFFQK 41 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 46889998 99999999864
No 376
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=21.58 E-value=57 Score=26.27 Aligned_cols=24 Identities=8% Similarity=0.241 Sum_probs=19.1
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...-|+|+|++ |++|.++|+....
T Consensus 28 ~~~~i~lvG~~g~GKStlin~l~g~~~ 54 (239)
T 3lxx_A 28 SQLRIVLVGKTGAGKSATGNSILGRKV 54 (239)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHTSCC
T ss_pred CceEEEEECCCCCCHHHHHHHHcCCCc
Confidence 34457899999 9999999997543
No 377
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=21.48 E-value=4.9 Score=35.90 Aligned_cols=19 Identities=5% Similarity=-0.214 Sum_probs=15.9
Q ss_pred CccCCCCccc-----------ccccccccc
Q psy10229 34 NSIFSFPPIL-----------EWHGRKKKM 52 (231)
Q Consensus 34 gl~F~~gdil-----------~Wwqa~~~~ 52 (231)
-|+|++||++ +|||+++..
T Consensus 119 eLsf~kgd~~~ier~ln~~~pdw~~l~k~r 148 (302)
T 2y3a_B 119 DLRAQASDNREIDKRMNSLKPDLMQLRKIR 148 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhhhhhhHHHhHHhhhccCChHHHHHhhcc
Confidence 4699999998 599999863
No 378
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=21.46 E-value=61 Score=24.08 Aligned_cols=19 Identities=11% Similarity=0.146 Sum_probs=16.2
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|++ |++|.++|...
T Consensus 7 ~i~~~G~~~~GKssl~~~l~~~ 28 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLISYTTN 28 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889998 99999999864
No 379
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=21.45 E-value=59 Score=25.31 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=17.6
Q ss_pred ceEEEECCC---hHHHHHHHHhhC
Q psy10229 113 RPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.-|+|+|++ |++|.++|....
T Consensus 13 ~~i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 13 PSIIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 447889998 999999999753
No 380
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=21.41 E-value=54 Score=24.84 Aligned_cols=19 Identities=11% Similarity=0.321 Sum_probs=16.5
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|...
T Consensus 9 ki~v~G~~~vGKSsli~~l~~~ 30 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLHVFAKD 30 (184)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 47889998 99999999874
No 381
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=21.39 E-value=62 Score=24.62 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=18.0
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
...|+|+||. |+|+.+.|.+..
T Consensus 4 g~~I~l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3468999999 999999998753
No 382
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=21.33 E-value=65 Score=24.76 Aligned_cols=22 Identities=23% Similarity=0.069 Sum_probs=18.1
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
.+..|.|+||+ |+|+.+.|.+.
T Consensus 7 ~~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 7 HPIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHC
Confidence 44568899998 99999998874
No 383
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=21.30 E-value=61 Score=24.71 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 24 ki~v~G~~~~GKSsli~~l~~~ 45 (188)
T 1zd9_A 24 ELTLVGLQYSGKTTFVNVIASG 45 (188)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 37889988 99999999874
No 384
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP, haparin sulfate, haparin sulfate biosynthesis, glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP: c.37.1.5
Probab=21.15 E-value=57 Score=28.04 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=25.1
Q ss_pred Cce-EEEECCC--hHHHHHHHHhhCCCCcccc-cCCC
Q psy10229 112 ARP-VIILGPL--KDRINDDLISEFPEQFGSC-VPPL 144 (231)
Q Consensus 112 ~Rp-VVL~GPs--k~~l~~~Ll~~~P~~F~~~-vp~T 144 (231)
..| |+|+|.. .+|....++..||+.+... .||+
T Consensus 46 ~~p~~~IiG~pKsGTT~L~~~L~~HP~i~~~~~~p~~ 82 (325)
T 1nst_A 46 RFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSET 82 (325)
T ss_dssp TSEEEEECCCTTSSHHHHHHHHHTSTTEEECCCBTTT
T ss_pred cCCCEEEECCCCccHHHHHHHHHhCcCcccCCCCCCC
Confidence 345 7889998 7888999999999977542 3555
No 385
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=21.10 E-value=49 Score=25.12 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=18.0
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
...-|+|+|++ |++|.++|+..
T Consensus 16 ~~~ki~v~G~~~~GKSsl~~~l~~~ 40 (199)
T 4bas_A 16 TKLQVVMCGLDNSGKTTIINQVKPA 40 (199)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHSCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhcC
Confidence 44458899998 99999999864
No 386
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=21.02 E-value=49 Score=24.80 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=15.9
Q ss_pred EEEECCC---hHHHHHHHHhh
Q psy10229 115 VIILGPL---KDRINDDLISE 132 (231)
Q Consensus 115 VVL~GPs---k~~l~~~Ll~~ 132 (231)
|+|+|+. |++|.++|+..
T Consensus 4 i~v~G~~~~GKSsli~~l~~~ 24 (190)
T 2cxx_A 4 IIFAGRSNVGKSTLIYRLTGK 24 (190)
T ss_dssp EEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCc
Confidence 6788998 99999999875
No 387
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=20.97 E-value=72 Score=24.95 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=18.8
Q ss_pred CceEEEECCC---hHHHHHHHHhhCC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...|.|+||+ |+|+.+.|...++
T Consensus 21 ~~~i~i~G~~GsGKSTl~~~L~~~~~ 46 (207)
T 2qt1_A 21 TFIIGISGVTNSGKTTLAKNLQKHLP 46 (207)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTTST
T ss_pred CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 4567899998 9999999987653
No 388
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=20.87 E-value=63 Score=24.88 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=17.8
Q ss_pred CCceEEEECCC---hHHHHHHHHhh
Q psy10229 111 YARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
...-|+|+|+. |++|.++|+..
T Consensus 27 ~~~ki~v~G~~~~GKSsli~~l~~~ 51 (199)
T 2p5s_A 27 KAYKIVLAGDAAVGKSSFLMRLCKN 51 (199)
T ss_dssp -CEEEEEESSTTSSHHHHHHHHHHC
T ss_pred CCeEEEEECcCCCCHHHHHHHHHhC
Confidence 34557899998 99999999875
No 389
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=20.85 E-value=70 Score=23.93 Aligned_cols=21 Identities=14% Similarity=0.483 Sum_probs=17.6
Q ss_pred ceEEEECCC---hHHHHHHHHhhC
Q psy10229 113 RPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 113 RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
+.|+|.||+ |+|+.+.|.+..
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHh
Confidence 468899998 999999998753
No 390
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=20.54 E-value=76 Score=24.24 Aligned_cols=22 Identities=18% Similarity=0.185 Sum_probs=18.1
Q ss_pred CceEEEECCC---hHHHHHHHHhhC
Q psy10229 112 ARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
.++++|.||. |+++.+.+.+..
T Consensus 45 ~~~~ll~G~~G~GKT~l~~~~~~~~ 69 (250)
T 1njg_A 45 HHAYLFSGTRGVGKTSIARLLAKGL 69 (250)
T ss_dssp CSEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3578999999 999998887754
No 391
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=20.44 E-value=27 Score=30.60 Aligned_cols=39 Identities=72% Similarity=1.174 Sum_probs=25.7
Q ss_pred HHHHHHhccCceeEEeccCCccchHHHHHHHhcCCCCCC
Q psy10229 153 KMEQEFGEFFTAVVQGDMPEDIYQKVKEVIQEQSGPSIW 191 (231)
Q Consensus 153 ~fe~~i~~~Fd~iE~g~~~g~~Y~sV~~v~~~~~~~~~w 191 (231)
+++..+...||.+-.+.-....|+.|++++.+++++++|
T Consensus 245 k~e~e~~~~fD~vIvNddle~a~~~l~~iI~~e~~~~~W 283 (292)
T 3tvt_A 245 KMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIW 283 (292)
T ss_dssp HHHHHHTTTCSEEECCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHhhhhhCCEEEECcCHHHHHHHHHHHHHHhhCCCeE
Confidence 345555445655554443344568899999998888888
No 392
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=20.35 E-value=70 Score=24.60 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=18.0
Q ss_pred CCceEEEECCC---hHHHHHHHHhhCC
Q psy10229 111 YARPVIILGPL---KDRINDDLISEFP 134 (231)
Q Consensus 111 ~~RpVVL~GPs---k~~l~~~Ll~~~P 134 (231)
...=|+|+|++ |++|.++|...+.
T Consensus 19 ~~~ki~~vG~~~vGKTsLi~~l~~~~~ 45 (196)
T 3llu_A 19 SKPRILLMGLRRSGKSSIQKVVFHKMS 45 (196)
T ss_dssp -CCEEEEEESTTSSHHHHHHHHHSCCC
T ss_pred cceEEEEECCCCCCHHHHHHHHHhcCC
Confidence 34458899998 9999998887543
No 393
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=20.20 E-value=75 Score=24.30 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=17.7
Q ss_pred CceEEEECCC---hHHHHHHHHhh
Q psy10229 112 ARPVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 112 ~RpVVL~GPs---k~~l~~~Ll~~ 132 (231)
..-|+|+|+. |++|.++|+..
T Consensus 28 ~~ki~v~G~~~vGKSsli~~l~~~ 51 (196)
T 2atv_A 28 EVKLAIFGRAGVGKSALVVRFLTK 51 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHhC
Confidence 3458899998 99999999875
No 394
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=20.16 E-value=67 Score=24.24 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=16.4
Q ss_pred eEEEECCC---hHHHHHHHHhh
Q psy10229 114 PVIILGPL---KDRINDDLISE 132 (231)
Q Consensus 114 pVVL~GPs---k~~l~~~Ll~~ 132 (231)
-|+|+|+. |++|.++|+..
T Consensus 23 ki~vvG~~~~GKSsli~~l~~~ 44 (190)
T 3con_A 23 KLVVVGAGGVGKSALTIQLIQN 44 (190)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECcCCCCHHHHHHHHHcC
Confidence 47889998 99999999875
No 395
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=20.09 E-value=96 Score=23.04 Aligned_cols=24 Identities=13% Similarity=-0.110 Sum_probs=19.5
Q ss_pred CCCceEEEECCC---hHHHHHHHHhhC
Q psy10229 110 DYARPVIILGPL---KDRINDDLISEF 133 (231)
Q Consensus 110 ~~~RpVVL~GPs---k~~l~~~Ll~~~ 133 (231)
....||+|.||. |+++.+.|....
T Consensus 22 ~~~~~vll~G~~GtGKt~lA~~i~~~~ 48 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGARYLHQFG 48 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHHHHHHHSS
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHhC
Confidence 456899999999 888888887653
Done!