Query psy10231
Match_columns 607
No_of_seqs 398 out of 1469
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 21:15:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10231.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10231hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 1.4E-43 3.1E-48 361.6 38.8 405 64-576 62-472 (485)
2 KOG0254|consensus 100.0 2.5E-39 5.4E-44 347.2 37.5 433 34-577 55-502 (513)
3 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-38 3.7E-43 345.4 35.9 415 35-566 178-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 8.1E-39 1.8E-43 343.3 31.4 439 33-571 25-501 (502)
5 PRK10077 xylE D-xylose transpo 100.0 4.3E-37 9.4E-42 329.2 40.7 417 34-576 22-475 (479)
6 TIGR00898 2A0119 cation transp 100.0 2.9E-36 6.3E-41 324.8 35.3 388 45-568 110-504 (505)
7 PF00083 Sugar_tr: Sugar (and 100.0 1.3E-42 2.8E-47 368.9 -20.2 422 34-572 10-450 (451)
8 TIGR00879 SP MFS transporter, 100.0 4.8E-35 1E-39 313.2 35.6 417 35-567 39-479 (481)
9 PRK10642 proline/glycine betai 100.0 1.4E-34 3E-39 309.3 32.6 384 32-566 24-437 (490)
10 KOG0252|consensus 100.0 4.2E-34 9.1E-39 279.6 16.2 428 33-572 50-511 (538)
11 KOG0253|consensus 100.0 1.3E-32 2.7E-37 260.8 25.6 393 42-566 96-527 (528)
12 KOG0255|consensus 100.0 1.3E-31 2.8E-36 289.2 37.1 388 56-572 112-506 (521)
13 COG2814 AraJ Arabinose efflux 100.0 1.3E-31 2.9E-36 265.7 32.4 358 31-557 20-385 (394)
14 TIGR00903 2A0129 major facilit 100.0 3E-32 6.6E-37 278.9 28.0 346 42-555 9-362 (368)
15 PRK09556 uhpT sugar phosphate 100.0 8.4E-32 1.8E-36 286.5 28.1 375 38-556 43-447 (467)
16 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.2E-32 1.1E-36 282.9 26.1 374 34-546 18-409 (412)
17 PRK12307 putative sialic acid 100.0 2.5E-31 5.3E-36 280.3 30.0 357 32-539 26-389 (426)
18 PRK11551 putative 3-hydroxyphe 100.0 4.3E-31 9.3E-36 276.6 30.9 362 34-555 25-393 (406)
19 COG2271 UhpC Sugar phosphate p 100.0 9.5E-32 2.1E-36 262.3 23.8 372 42-557 47-433 (448)
20 PRK11663 regulatory protein Uh 100.0 1.1E-31 2.4E-36 282.8 25.3 379 37-561 36-427 (434)
21 PRK10406 alpha-ketoglutarate t 100.0 1.2E-30 2.6E-35 274.9 32.4 361 33-556 31-422 (432)
22 PRK03545 putative arabinose tr 100.0 1.6E-30 3.5E-35 270.5 32.7 347 42-558 27-380 (390)
23 PRK09952 shikimate transporter 100.0 2.3E-30 5E-35 272.8 33.1 373 32-562 30-436 (438)
24 TIGR00891 2A0112 putative sial 100.0 2.2E-30 4.7E-35 271.1 31.4 370 32-541 20-399 (405)
25 PRK14995 methyl viologen resis 100.0 1.4E-29 3E-34 271.0 36.2 390 31-533 13-413 (495)
26 PRK09705 cynX putative cyanate 100.0 6.1E-30 1.3E-34 265.9 32.1 354 41-565 26-388 (393)
27 PRK03893 putative sialic acid 100.0 7.9E-30 1.7E-34 274.3 30.8 408 31-549 27-444 (496)
28 PRK15075 citrate-proton sympor 100.0 1.6E-29 3.6E-34 266.4 30.4 347 30-536 21-397 (434)
29 TIGR00893 2A0114 d-galactonate 100.0 8.3E-30 1.8E-34 265.5 27.6 379 37-555 7-396 (399)
30 PRK05122 major facilitator sup 100.0 1.9E-29 4.2E-34 263.4 29.9 356 28-557 19-388 (399)
31 PRK10489 enterobactin exporter 100.0 1.6E-29 3.6E-34 265.4 27.2 375 31-569 24-410 (417)
32 TIGR00890 2A0111 Oxalate/Forma 100.0 3.5E-29 7.6E-34 259.1 28.2 349 42-551 21-375 (377)
33 PRK11273 glpT sn-glycerol-3-ph 100.0 3.6E-29 7.7E-34 265.2 28.3 369 43-557 48-434 (452)
34 PRK12382 putative transporter; 100.0 3.8E-28 8.3E-33 252.9 32.6 353 31-557 22-388 (392)
35 PRK10504 putative transporter; 100.0 4.3E-28 9.3E-33 258.9 33.1 390 33-537 19-419 (471)
36 PRK10091 MFS transport protein 100.0 3.6E-28 7.7E-33 252.0 31.0 361 30-559 9-377 (382)
37 PLN00028 nitrate transmembrane 100.0 2.9E-28 6.4E-33 259.1 27.3 362 37-557 49-432 (476)
38 TIGR00895 2A0115 benzoate tran 100.0 3.6E-28 7.8E-33 253.6 26.8 362 35-530 28-397 (398)
39 PRK10213 nepI ribonucleoside t 100.0 2.1E-27 4.5E-32 246.8 32.1 340 43-553 39-386 (394)
40 PRK09874 drug efflux system pr 100.0 1.2E-27 2.6E-32 250.7 29.9 379 14-557 4-397 (408)
41 PRK03699 putative transporter; 100.0 3.4E-28 7.4E-33 253.2 25.5 354 32-554 15-376 (394)
42 TIGR00712 glpT glycerol-3-phos 100.0 5.5E-28 1.2E-32 255.1 25.8 378 43-563 46-438 (438)
43 TIGR00711 efflux_EmrB drug res 100.0 1.2E-27 2.7E-32 256.6 28.8 393 31-534 9-411 (485)
44 PRK15034 nitrate/nitrite trans 100.0 5.7E-27 1.2E-31 241.4 30.5 365 41-558 51-454 (462)
45 TIGR00881 2A0104 phosphoglycer 100.0 2.2E-28 4.9E-33 253.2 20.2 363 35-539 6-378 (379)
46 TIGR00892 2A0113 monocarboxyla 100.0 3.4E-28 7.3E-33 257.3 21.2 366 43-553 38-416 (455)
47 PRK03633 putative MFS family t 100.0 7.8E-27 1.7E-31 241.9 30.0 351 30-553 12-367 (381)
48 TIGR00900 2A0121 H+ Antiporter 100.0 4E-27 8.7E-32 242.6 26.7 345 33-535 8-365 (365)
49 TIGR00897 2A0118 polyol permea 100.0 3.6E-26 7.7E-31 238.6 32.7 363 36-556 25-399 (402)
50 TIGR00894 2A0114euk Na(+)-depe 100.0 4.8E-27 1E-31 250.3 26.4 361 56-556 70-448 (465)
51 TIGR00899 2A0120 sugar efflux 100.0 1.7E-26 3.6E-31 239.2 29.7 357 31-555 4-371 (375)
52 PRK15402 multidrug efflux syst 100.0 3.3E-26 7.2E-31 239.5 31.8 353 39-550 28-387 (406)
53 KOG2532|consensus 100.0 7.8E-27 1.7E-31 242.1 25.5 357 55-557 66-446 (466)
54 TIGR00710 efflux_Bcr_CflA drug 100.0 3.9E-26 8.4E-31 237.3 30.5 338 36-533 17-361 (385)
55 cd06174 MFS The Major Facilita 100.0 4.7E-26 1E-30 233.1 29.5 334 33-555 8-349 (352)
56 PF07690 MFS_1: Major Facilita 100.0 4.8E-27 1E-31 240.8 21.1 337 33-524 5-352 (352)
57 PRK15403 multidrug efflux syst 99.9 1.6E-25 3.4E-30 234.0 31.6 150 39-191 31-185 (413)
58 TIGR00883 2A0106 metabolite-pr 99.9 3.3E-26 7.2E-31 238.3 25.7 353 37-546 6-389 (394)
59 PRK11043 putative transporter; 99.9 1.3E-25 2.9E-30 234.6 28.9 331 43-537 25-361 (401)
60 PRK11195 lysophospholipid tran 99.9 1.7E-25 3.6E-30 232.4 28.9 365 29-557 8-379 (393)
61 KOG1330|consensus 99.9 4.3E-27 9.4E-32 231.9 14.8 154 37-193 46-205 (493)
62 PRK10473 multidrug efflux syst 99.9 1.3E-25 2.9E-30 233.8 27.0 147 42-191 21-172 (392)
63 COG2223 NarK Nitrate/nitrite t 99.9 1E-25 2.2E-30 220.9 23.7 358 40-557 30-400 (417)
64 PRK10133 L-fucose transporter; 99.9 3.6E-25 7.8E-30 232.5 29.3 358 34-550 36-425 (438)
65 PRK11102 bicyclomycin/multidru 99.9 4.7E-25 1E-29 228.5 29.8 149 40-191 7-160 (377)
66 TIGR00885 fucP L-fucose:H+ sym 99.9 1.1E-24 2.4E-29 226.8 29.9 364 31-534 10-382 (410)
67 PRK11646 multidrug resistance 99.9 6.9E-25 1.5E-29 228.3 28.3 351 36-553 22-383 (400)
68 PRK11010 ampG muropeptide tran 99.9 1.1E-24 2.4E-29 232.1 29.7 379 18-557 4-402 (491)
69 PRK10054 putative transporter; 99.9 2.9E-25 6.4E-30 230.7 24.5 357 33-555 16-381 (395)
70 KOG2533|consensus 99.9 1.4E-25 3E-30 233.2 20.3 362 44-548 63-446 (495)
71 TIGR00896 CynX cyanate transpo 99.9 1.7E-24 3.6E-29 222.4 28.0 325 41-536 17-351 (355)
72 PF06609 TRI12: Fungal trichot 99.9 1.6E-23 3.4E-28 220.1 34.1 384 43-531 63-465 (599)
73 PRK15011 sugar efflux transpor 99.9 1E-23 2.3E-28 219.3 32.1 362 28-560 19-392 (393)
74 TIGR00889 2A0110 nucleoside tr 99.9 5.5E-24 1.2E-28 222.5 29.4 365 34-564 12-408 (418)
75 TIGR00902 2A0127 phenyl propri 99.9 1.4E-23 3.1E-28 217.5 28.5 350 34-553 14-374 (382)
76 TIGR00886 2A0108 nitrite extru 99.9 3.7E-24 8E-29 220.9 21.9 331 39-519 16-365 (366)
77 PTZ00207 hypothetical protein; 99.9 2.3E-23 4.9E-28 220.6 28.0 463 44-563 47-557 (591)
78 PRK09528 lacY galactoside perm 99.9 2.8E-23 6.1E-28 218.2 27.1 366 35-560 21-405 (420)
79 PRK11652 emrD multidrug resist 99.9 9.8E-23 2.1E-27 212.4 29.5 151 38-191 22-177 (394)
80 PRK11128 putative 3-phenylprop 99.9 1.6E-22 3.4E-27 209.7 29.4 349 33-551 13-372 (382)
81 PRK10207 dipeptide/tripeptide 99.9 2E-22 4.4E-27 213.7 30.3 147 42-191 33-188 (489)
82 PRK11902 ampG muropeptide tran 99.9 3.9E-22 8.4E-27 208.3 31.4 360 33-555 8-387 (402)
83 PRK08633 2-acyl-glycerophospho 99.9 9.5E-23 2.1E-27 241.4 28.9 357 41-554 27-406 (1146)
84 KOG2615|consensus 99.9 5.9E-23 1.3E-27 197.1 21.2 115 59-173 65-179 (451)
85 KOG2504|consensus 99.9 5.7E-24 1.2E-28 223.6 14.6 406 33-559 56-476 (509)
86 TIGR00882 2A0105 oligosacchari 99.9 2.4E-22 5.3E-27 209.5 26.7 358 39-556 17-393 (396)
87 TIGR00806 rfc RFC reduced fola 99.9 2.9E-22 6.3E-27 202.1 22.6 157 42-201 44-207 (511)
88 TIGR00901 2A0125 AmpG-related 99.9 8.6E-22 1.9E-26 202.4 26.5 329 39-517 3-355 (356)
89 PRK06814 acylglycerophosphoeth 99.9 1.5E-21 3.2E-26 230.5 29.6 347 62-553 52-417 (1140)
90 COG0738 FucP Fucose permease [ 99.9 5.7E-21 1.2E-25 186.2 24.8 373 32-551 21-402 (422)
91 TIGR00924 yjdL_sub1_fam amino 99.9 4.7E-20 1E-24 195.6 33.8 156 37-193 23-188 (475)
92 TIGR00792 gph sugar (Glycoside 99.9 1.9E-21 4.2E-26 205.7 22.0 331 45-536 21-383 (437)
93 PF05977 MFS_3: Transmembrane 99.9 8.5E-21 1.8E-25 200.6 26.3 369 24-555 11-391 (524)
94 TIGR00805 oat sodium-independe 99.9 2.3E-21 4.9E-26 211.3 21.2 134 37-173 46-231 (633)
95 KOG3764|consensus 99.9 8.5E-22 1.9E-26 190.3 14.9 341 56-557 100-453 (464)
96 PRK09584 tppB putative tripept 99.9 1.7E-19 3.7E-24 192.5 33.0 145 44-191 42-195 (500)
97 TIGR02718 sider_RhtX_FptX side 99.8 5.5E-19 1.2E-23 183.9 29.1 359 34-553 11-386 (390)
98 COG2807 CynX Cyanate permease 99.8 1.4E-18 3E-23 167.1 27.7 356 30-556 14-383 (395)
99 TIGR01301 GPH_sucrose GPH fami 99.8 8.1E-19 1.8E-23 182.4 25.4 378 44-563 24-476 (477)
100 PRK15462 dipeptide/tripeptide 99.8 2.4E-16 5.2E-21 164.7 35.3 136 56-191 39-183 (493)
101 PF03825 Nuc_H_symport: Nucleo 99.8 1.2E-16 2.6E-21 164.3 31.5 361 39-561 17-398 (400)
102 PRK10429 melibiose:sodium symp 99.8 1.4E-17 3E-22 177.4 20.0 112 56-167 36-160 (473)
103 TIGR00788 fbt folate/biopterin 99.8 3.4E-17 7.3E-22 173.4 21.3 364 33-535 35-415 (468)
104 PRK09669 putative symporter Ya 99.8 4E-17 8.8E-22 172.7 20.7 122 45-169 31-165 (444)
105 PF01306 LacY_symp: LacY proto 99.7 5.9E-16 1.3E-20 156.1 21.8 189 358-564 212-406 (412)
106 PRK09848 glucuronide transport 99.7 7E-16 1.5E-20 163.5 21.5 331 46-536 31-391 (448)
107 PF13347 MFS_2: MFS/sugar tran 99.7 4.6E-16 1E-20 163.8 19.9 332 44-536 22-387 (428)
108 COG3104 PTR2 Dipeptide/tripept 99.7 2.8E-14 6E-19 144.0 29.9 421 40-559 38-488 (498)
109 PF11700 ATG22: Vacuole efflux 99.7 5E-14 1.1E-18 147.8 33.0 366 63-563 71-472 (477)
110 KOG4686|consensus 99.7 4.2E-16 9.1E-21 143.7 14.0 364 43-555 63-440 (459)
111 PRK11462 putative transporter; 99.7 1.2E-14 2.7E-19 153.7 25.9 115 56-170 39-166 (460)
112 TIGR01272 gluP glucose/galacto 99.6 8.9E-14 1.9E-18 139.1 25.9 287 110-542 5-299 (310)
113 KOG2563|consensus 99.6 1.7E-14 3.7E-19 142.9 18.9 384 26-565 41-457 (480)
114 COG2211 MelB Na+/melibiose sym 99.6 6.8E-14 1.5E-18 142.6 22.1 340 39-536 27-399 (467)
115 COG2270 Permeases of the major 99.6 2E-12 4.4E-17 127.7 27.3 364 61-561 57-431 (438)
116 KOG3626|consensus 99.6 3.8E-13 8.2E-18 142.9 22.3 304 35-448 108-474 (735)
117 KOG2325|consensus 99.5 1.4E-13 3.1E-18 140.5 15.9 128 44-173 55-188 (488)
118 PF03137 OATP: Organic Anion T 99.5 1.8E-15 4E-20 160.8 -0.2 400 37-534 16-515 (539)
119 PRK10642 proline/glycine betai 99.5 7.1E-14 1.5E-18 149.8 11.6 145 56-201 280-434 (490)
120 TIGR00880 2_A_01_02 Multidrug 99.5 3.5E-13 7.6E-18 117.9 10.0 133 67-199 3-141 (141)
121 PF03209 PUCC: PUCC protein; 99.4 9.5E-10 2.1E-14 109.4 28.9 319 56-533 9-363 (403)
122 TIGR00895 2A0115 benzoate tran 99.3 1.1E-11 2.4E-16 129.1 14.9 179 372-563 18-197 (398)
123 TIGR01299 synapt_SV2 synaptic 99.3 1E-11 2.2E-16 136.5 13.1 136 65-200 598-737 (742)
124 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.7E-10 3.6E-15 120.9 20.1 179 372-563 9-194 (412)
125 TIGR00893 2A0114 d-galactonate 99.3 4.3E-11 9.3E-16 124.4 14.9 163 388-563 11-174 (399)
126 PRK11663 regulatory protein Uh 99.3 1E-10 2.2E-15 123.5 17.5 174 375-561 27-201 (434)
127 COG2814 AraJ Arabinose efflux 99.3 4.3E-10 9.4E-15 112.7 20.3 173 374-559 16-189 (394)
128 TIGR00710 efflux_Bcr_CflA drug 99.3 1.7E-10 3.8E-15 119.7 18.1 168 384-564 18-186 (385)
129 PRK03545 putative arabinose tr 99.3 3.5E-10 7.6E-15 117.7 20.3 160 390-562 28-188 (390)
130 PRK10213 nepI ribonucleoside t 99.2 4.3E-10 9.4E-15 117.0 19.9 181 368-562 18-199 (394)
131 TIGR00889 2A0110 nucleoside tr 99.2 3E-11 6.4E-16 126.6 11.0 143 61-203 250-409 (418)
132 PRK10473 multidrug efflux syst 99.2 3.7E-10 8E-15 117.6 18.2 178 373-563 5-183 (392)
133 PRK09874 drug efflux system pr 99.2 8.1E-10 1.8E-14 115.7 20.7 171 377-561 20-196 (408)
134 PRK10054 putative transporter; 99.2 3.9E-10 8.4E-15 117.4 17.8 167 382-562 18-186 (395)
135 PF03092 BT1: BT1 family; Int 99.2 1.4E-10 3E-15 121.4 14.4 144 44-191 10-169 (433)
136 PRK11551 putative 3-hydroxyphe 99.2 3.9E-10 8.4E-15 118.1 17.9 168 382-562 26-194 (406)
137 PRK15011 sugar efflux transpor 99.2 8.2E-11 1.8E-15 122.5 12.5 142 56-198 246-392 (393)
138 KOG2816|consensus 99.2 9E-11 2E-15 121.9 12.5 125 70-199 70-202 (463)
139 PRK09528 lacY galactoside perm 99.2 1.9E-10 4.1E-15 121.0 14.8 144 57-200 257-407 (420)
140 TIGR00711 efflux_EmrB drug res 99.2 2.1E-10 4.5E-15 123.1 15.3 176 375-563 6-182 (485)
141 COG2271 UhpC Sugar phosphate p 99.2 1.4E-10 3.1E-15 114.7 12.3 182 369-563 27-211 (448)
142 TIGR00891 2A0112 putative sial 99.2 1.2E-09 2.6E-14 114.1 19.6 177 372-562 13-192 (405)
143 PRK14995 methyl viologen resis 99.2 7.9E-10 1.7E-14 118.7 18.5 178 372-562 7-186 (495)
144 PRK10091 MFS transport protein 99.2 1E-09 2.2E-14 113.9 18.6 164 387-563 19-183 (382)
145 TIGR00890 2A0111 Oxalate/Forma 99.2 7.4E-11 1.6E-15 121.8 9.9 135 56-190 234-375 (377)
146 PLN00028 nitrate transmembrane 99.2 2.5E-09 5.4E-14 114.1 21.5 168 378-559 43-220 (476)
147 PRK10504 putative transporter; 99.2 1.5E-09 3.3E-14 116.0 19.9 171 378-561 17-188 (471)
148 PRK15403 multidrug efflux syst 99.2 1.7E-09 3.7E-14 113.3 19.7 156 395-563 40-196 (413)
149 PRK05122 major facilitator sup 99.2 1.4E-10 3E-15 121.2 11.0 138 62-199 249-391 (399)
150 cd06174 MFS The Major Facilita 99.2 9.6E-11 2.1E-15 119.6 9.4 149 44-194 195-349 (352)
151 PF07690 MFS_1: Major Facilita 99.1 5.4E-10 1.2E-14 114.3 14.5 164 387-563 12-177 (352)
152 TIGR00881 2A0104 phosphoglycer 99.1 1.9E-10 4.1E-15 118.9 10.6 164 387-563 11-176 (379)
153 PRK15402 multidrug efflux syst 99.1 2.2E-09 4.8E-14 112.4 18.0 163 388-563 30-193 (406)
154 TIGR00900 2A0121 H+ Antiporter 99.1 1.9E-09 4.2E-14 110.7 17.1 162 387-556 15-177 (365)
155 PRK12307 putative sialic acid 99.1 3E-09 6.5E-14 112.2 18.4 157 375-544 22-179 (426)
156 PRK11273 glpT sn-glycerol-3-ph 99.1 2.9E-09 6.3E-14 113.0 18.4 163 390-562 48-212 (452)
157 PRK11646 multidrug resistance 99.1 5.5E-09 1.2E-13 109.0 20.0 162 386-561 25-188 (400)
158 PRK11652 emrD multidrug resist 99.1 5.3E-09 1.1E-13 109.0 19.9 162 389-563 26-188 (394)
159 TIGR00899 2A0120 sugar efflux 99.1 4E-10 8.8E-15 116.5 11.3 141 56-197 229-374 (375)
160 PRK11102 bicyclomycin/multidru 99.1 2.7E-09 5.9E-14 110.5 16.4 162 388-562 8-170 (377)
161 PRK15462 dipeptide/tripeptide 99.1 6.1E-09 1.3E-13 109.4 19.0 159 383-553 21-184 (493)
162 TIGR00712 glpT glycerol-3-phos 99.1 2.4E-09 5.2E-14 113.2 16.2 162 390-562 46-210 (438)
163 PF05631 DUF791: Protein of un 99.1 3E-09 6.5E-14 104.2 14.8 96 43-142 53-150 (354)
164 TIGR00903 2A0129 major facilit 99.1 6.4E-09 1.4E-13 106.8 17.8 162 388-563 8-170 (368)
165 PRK12382 putative transporter; 99.1 7.6E-10 1.6E-14 115.3 10.9 130 63-192 250-384 (392)
166 PRK03893 putative sialic acid 99.0 6E-09 1.3E-13 112.2 18.0 159 372-543 21-180 (496)
167 PRK11043 putative transporter; 99.0 1.7E-08 3.8E-13 105.4 20.8 151 394-557 29-180 (401)
168 PRK03699 putative transporter; 99.0 1.7E-08 3.6E-13 105.2 20.3 170 372-554 8-179 (394)
169 PRK10489 enterobactin exporter 99.0 9.5E-10 2.1E-14 115.6 11.0 155 45-201 244-404 (417)
170 TIGR00924 yjdL_sub1_fam amino 99.0 9.7E-09 2.1E-13 109.3 18.6 162 379-553 18-187 (475)
171 TIGR00886 2A0108 nitrite extru 99.0 9E-09 2E-13 106.0 17.6 167 382-561 12-191 (366)
172 TIGR00880 2_A_01_02 Multidrug 99.0 5.1E-09 1.1E-13 91.2 13.5 135 414-561 7-141 (141)
173 PF01770 Folate_carrier: Reduc 99.0 2.2E-08 4.8E-13 101.0 19.4 154 46-201 26-186 (412)
174 TIGR00892 2A0113 monocarboxyla 99.0 6.7E-09 1.4E-13 110.2 16.5 158 388-559 36-195 (455)
175 TIGR00887 2A0109 phosphate:H+ 99.0 3.2E-08 6.9E-13 106.6 21.9 146 408-563 59-229 (502)
176 TIGR00897 2A0118 polyol permea 99.0 9E-09 2E-13 107.5 16.7 166 386-560 28-195 (402)
177 TIGR00879 SP MFS transporter, 99.0 7.3E-09 1.6E-13 110.6 16.0 145 407-562 73-220 (481)
178 PRK03633 putative MFS family t 99.0 1.4E-09 3E-14 112.9 9.9 144 45-194 221-369 (381)
179 PRK15034 nitrate/nitrite trans 99.0 9.4E-08 2E-12 99.4 23.0 180 373-561 36-235 (462)
180 PRK09556 uhpT sugar phosphate 99.0 5.9E-09 1.3E-13 111.2 14.2 163 390-560 48-214 (467)
181 TIGR00902 2A0127 phenyl propri 99.0 2.1E-09 4.6E-14 111.5 10.5 141 46-191 227-373 (382)
182 PRK10077 xylE D-xylose transpo 99.0 4.1E-08 8.8E-13 105.2 20.3 154 407-562 57-218 (479)
183 KOG1330|consensus 99.0 6.6E-10 1.4E-14 111.1 5.6 155 401-568 63-219 (493)
184 PRK10207 dipeptide/tripeptide 98.9 2.7E-08 5.9E-13 106.0 17.6 164 370-546 14-182 (489)
185 TIGR00883 2A0106 metabolite-pr 98.9 4.1E-09 8.9E-14 109.5 10.5 141 45-188 240-392 (394)
186 PRK09584 tppB putative tripept 98.9 9.4E-08 2E-12 102.4 21.1 157 382-550 32-193 (500)
187 PRK09952 shikimate transporter 98.9 1.1E-08 2.5E-13 107.9 13.9 145 56-200 280-436 (438)
188 KOG3762|consensus 98.9 1.9E-08 4.1E-13 102.3 14.6 156 387-555 387-544 (618)
189 PRK11195 lysophospholipid tran 98.9 4.7E-08 1E-12 101.7 18.0 155 390-562 22-177 (393)
190 PTZ00207 hypothetical protein; 98.9 1.9E-07 4.1E-12 100.0 21.2 166 386-561 42-208 (591)
191 PF06609 TRI12: Fungal trichot 98.9 4.7E-08 1E-12 104.0 16.1 155 392-560 65-220 (599)
192 COG2223 NarK Nitrate/nitrite t 98.9 7.1E-08 1.5E-12 95.9 16.3 166 383-560 26-195 (417)
193 TIGR00894 2A0114euk Na(+)-depe 98.9 1.2E-08 2.5E-13 108.9 11.5 143 408-561 79-222 (465)
194 PRK09705 cynX putative cyanate 98.8 1.6E-07 3.4E-12 97.8 18.8 149 388-550 26-176 (393)
195 PRK10406 alpha-ketoglutarate t 98.8 2.2E-07 4.8E-12 98.1 19.9 178 378-561 29-221 (432)
196 KOG2615|consensus 98.8 1.4E-08 3E-13 98.9 9.7 163 387-563 44-218 (451)
197 PF05977 MFS_3: Transmembrane 98.8 1.4E-08 3E-13 108.1 10.4 155 36-192 230-389 (524)
198 TIGR00898 2A0119 cation transp 98.8 2.5E-08 5.3E-13 107.7 12.5 135 66-200 359-498 (505)
199 PRK15075 citrate-proton sympor 98.8 1.5E-07 3.2E-12 99.5 18.1 168 372-544 16-198 (434)
200 KOG3098|consensus 98.8 3.7E-06 8E-11 86.5 27.3 102 68-170 56-158 (461)
201 TIGR01301 GPH_sucrose GPH fami 98.8 3.7E-07 7.9E-12 95.7 20.3 176 387-563 20-223 (477)
202 KOG0569|consensus 98.8 2.2E-07 4.8E-12 96.4 18.1 144 409-563 64-209 (485)
203 TIGR00901 2A0125 AmpG-related 98.8 1.8E-07 4E-12 96.0 17.7 163 389-562 6-182 (356)
204 PRK11128 putative 3-phenylprop 98.8 2.3E-08 4.9E-13 103.7 10.9 134 56-191 234-373 (382)
205 TIGR00885 fucP L-fucose:H+ sym 98.8 2.5E-07 5.4E-12 96.7 18.7 157 388-554 20-203 (410)
206 KOG3764|consensus 98.8 2.7E-08 5.9E-13 97.6 10.1 147 406-565 107-254 (464)
207 PRK11902 ampG muropeptide tran 98.8 3.7E-07 8.1E-12 95.4 19.4 169 381-562 9-185 (402)
208 TIGR00882 2A0105 oligosacchari 98.8 3E-08 6.5E-13 103.4 10.9 134 58-191 250-389 (396)
209 PF11700 ATG22: Vacuole efflux 98.8 9.1E-08 2E-12 100.8 13.9 152 45-199 303-470 (477)
210 PF06813 Nodulin-like: Nodulin 98.8 2.4E-07 5.2E-12 88.1 15.0 152 44-200 22-185 (250)
211 COG2270 Permeases of the major 98.7 1.1E-07 2.4E-12 94.6 12.7 144 56-199 282-431 (438)
212 PRK06814 acylglycerophosphoeth 98.7 3.9E-07 8.6E-12 108.3 19.4 144 408-562 55-198 (1140)
213 PRK10133 L-fucose transporter; 98.7 1.2E-06 2.6E-11 92.4 20.7 138 384-531 39-177 (438)
214 PRK11010 ampG muropeptide tran 98.7 9.9E-07 2.1E-11 94.5 20.0 168 383-562 24-198 (491)
215 TIGR02718 sider_RhtX_FptX side 98.7 1E-07 2.2E-12 99.1 11.3 136 56-191 237-385 (390)
216 TIGR00792 gph sugar (Glycoside 98.7 1.2E-07 2.6E-12 100.3 11.7 114 60-173 255-377 (437)
217 PRK08633 2-acyl-glycerophospho 98.7 7.7E-08 1.7E-12 114.7 10.6 144 56-199 262-413 (1146)
218 TIGR00805 oat sodium-independe 98.7 2.6E-07 5.7E-12 101.4 13.8 190 372-562 34-284 (633)
219 KOG0637|consensus 98.6 6.6E-08 1.4E-12 96.7 7.5 148 29-179 35-208 (498)
220 KOG0255|consensus 98.6 9.1E-07 2E-11 95.9 16.2 140 407-563 120-259 (521)
221 TIGR00806 rfc RFC reduced fola 98.6 2.3E-06 5.1E-11 87.7 17.6 157 391-562 46-206 (511)
222 COG0477 ProP Permeases of the 98.6 2.9E-07 6.2E-12 91.7 10.7 149 38-189 16-177 (338)
223 TIGR00896 CynX cyanate transpo 98.6 1.1E-06 2.3E-11 90.2 14.6 147 388-549 17-166 (355)
224 KOG4332|consensus 98.5 4E-06 8.6E-11 77.8 15.9 95 48-143 58-154 (454)
225 KOG0254|consensus 98.5 2.2E-06 4.7E-11 92.5 16.6 141 408-563 92-234 (513)
226 KOG2504|consensus 98.5 9.6E-08 2.1E-12 101.3 5.5 156 39-197 313-476 (509)
227 PRK09848 glucuronide transport 98.5 1.1E-06 2.3E-11 93.4 12.2 118 56-173 258-385 (448)
228 TIGR00926 2A1704 Peptide:H+ sy 98.4 2.1E-05 4.6E-10 85.9 20.7 149 41-192 5-177 (654)
229 PF06813 Nodulin-like: Nodulin 98.4 4.5E-06 9.7E-11 79.4 13.0 141 384-533 15-157 (250)
230 KOG2532|consensus 98.4 5.2E-06 1.1E-10 87.1 14.1 143 407-560 75-218 (466)
231 TIGR01272 gluP glucose/galacto 98.4 3.7E-06 7.9E-11 84.2 12.1 127 56-185 172-303 (310)
232 PF03825 Nuc_H_symport: Nucleo 98.3 3.2E-06 7E-11 87.4 11.5 144 56-199 236-398 (400)
233 COG3104 PTR2 Dipeptide/tripept 98.3 4E-06 8.6E-11 85.6 11.5 162 385-557 35-205 (498)
234 PF13347 MFS_2: MFS/sugar tran 98.3 2.9E-06 6.3E-11 89.4 10.8 138 33-173 234-381 (428)
235 TIGR00788 fbt folate/biopterin 98.3 3.7E-06 8E-11 89.4 11.4 145 56-200 282-449 (468)
236 KOG0253|consensus 98.3 1.9E-06 4E-11 83.9 7.3 129 72-200 391-522 (528)
237 PF02487 CLN3: CLN3 protein; 98.3 4.9E-05 1.1E-09 77.0 17.4 124 62-190 59-188 (402)
238 PRK10429 melibiose:sodium symp 98.3 1.5E-05 3.3E-10 85.1 14.6 113 60-172 264-389 (473)
239 PF06963 FPN1: Ferroportin1 (F 98.2 0.0013 2.9E-08 68.0 26.6 130 391-523 278-408 (432)
240 PRK09669 putative symporter Ya 98.2 1.7E-05 3.6E-10 84.1 13.1 112 62-173 264-385 (444)
241 PF00083 Sugar_tr: Sugar (and 98.2 3.2E-08 6.8E-13 105.2 -7.8 145 408-563 49-196 (451)
242 PF01306 LacY_symp: LacY proto 98.1 9.2E-06 2E-10 82.7 9.5 144 56-199 253-403 (412)
243 PF06779 DUF1228: Protein of u 98.1 2.1E-06 4.5E-11 66.0 3.1 79 38-119 6-84 (85)
244 KOG2533|consensus 98.1 2.2E-05 4.7E-10 82.8 10.7 143 408-563 84-232 (495)
245 KOG2816|consensus 98.1 6.7E-05 1.5E-09 78.5 14.3 138 414-567 71-208 (463)
246 COG2807 CynX Cyanate permease 98.0 2E-05 4.3E-10 77.1 9.1 166 22-192 204-380 (395)
247 KOG3574|consensus 98.0 0.00052 1.1E-08 67.5 18.0 128 34-167 41-186 (510)
248 KOG0252|consensus 98.0 6E-05 1.3E-09 76.0 11.9 111 407-524 86-197 (538)
249 TIGR00769 AAA ADP/ATP carrier 98.0 0.012 2.5E-07 61.9 28.7 124 47-173 26-188 (472)
250 KOG3810|consensus 98.0 0.0011 2.4E-08 64.5 19.2 145 56-200 35-186 (433)
251 PRK11462 putative transporter; 97.9 0.00045 9.8E-09 73.4 17.9 168 387-561 25-207 (460)
252 PF03209 PUCC: PUCC protein; 97.9 0.00015 3.3E-09 72.8 13.3 162 27-191 211-392 (403)
253 PF05978 UNC-93: Ion channel r 97.9 8.7E-05 1.9E-09 65.1 10.3 114 58-172 33-147 (156)
254 KOG4686|consensus 97.9 6E-05 1.3E-09 70.9 9.6 165 27-196 265-442 (459)
255 COG0738 FucP Fucose permease [ 97.9 0.00061 1.3E-08 68.0 16.4 153 391-554 33-206 (422)
256 KOG2325|consensus 97.8 8E-05 1.7E-09 77.1 9.5 161 396-565 59-236 (488)
257 KOG3762|consensus 97.8 6.6E-05 1.4E-09 77.1 8.1 140 54-193 398-543 (618)
258 KOG1237|consensus 97.6 0.0013 2.9E-08 70.7 15.4 148 41-191 55-239 (571)
259 PF12832 MFS_1_like: MFS_1 lik 97.5 6.1E-05 1.3E-09 57.5 2.6 60 43-102 16-75 (77)
260 COG2211 MelB Na+/melibiose sym 97.5 0.00064 1.4E-08 70.3 10.7 118 56-173 266-393 (467)
261 PF05631 DUF791: Protein of un 97.4 0.014 2.9E-07 58.1 17.8 160 392-564 55-222 (354)
262 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.0063 1.4E-07 66.9 16.7 151 401-556 18-180 (654)
263 PF00854 PTR2: POT family; In 97.3 0.0041 8.9E-08 64.1 14.1 100 93-192 2-118 (372)
264 KOG2563|consensus 97.2 0.013 2.9E-07 59.5 15.3 122 405-533 79-202 (480)
265 PF13000 Acatn: Acetyl-coenzym 97.2 0.033 7.2E-07 57.5 17.9 43 491-533 425-467 (544)
266 TIGR00939 2a57 Equilibrative N 97.1 0.021 4.5E-07 59.8 16.6 55 471-526 373-427 (437)
267 PF03092 BT1: BT1 family; Int 97.0 0.01 2.2E-07 62.4 13.1 132 420-561 39-178 (433)
268 PF05978 UNC-93: Ion channel r 96.8 0.038 8.2E-07 48.6 13.0 106 408-527 40-145 (156)
269 PF07672 MFS_Mycoplasma: Mycop 96.7 0.036 7.8E-07 52.4 12.8 51 256-306 2-61 (267)
270 PF12832 MFS_1_like: MFS_1 lik 96.6 0.013 2.8E-07 44.7 7.8 62 382-443 11-73 (77)
271 TIGR00769 AAA ADP/ATP carrier 96.4 0.34 7.4E-06 51.0 19.0 113 419-532 58-190 (472)
272 PRK03612 spermidine synthase; 96.3 0.074 1.6E-06 57.1 13.9 117 56-173 44-168 (521)
273 PF06963 FPN1: Ferroportin1 (F 96.2 0.25 5.4E-06 51.4 16.6 175 383-559 14-201 (432)
274 PF03219 TLC: TLC ATP/ADP tran 95.8 2 4.4E-05 45.6 21.7 114 60-173 56-203 (491)
275 PF03137 OATP: Organic Anion T 95.7 0.0018 3.9E-08 69.6 -1.6 132 400-531 32-201 (539)
276 PF01770 Folate_carrier: Reduc 95.7 0.34 7.3E-06 49.7 14.6 131 418-563 54-186 (412)
277 COG0477 ProP Permeases of the 95.6 0.79 1.7E-05 44.8 17.4 141 390-541 21-168 (338)
278 COG3202 ATP/ADP translocase [E 95.6 3.6 7.8E-05 42.9 23.2 126 45-173 44-207 (509)
279 KOG3626|consensus 95.4 0.13 2.7E-06 56.4 11.1 164 401-565 127-349 (735)
280 PF03219 TLC: TLC ATP/ADP tran 94.8 2.6 5.7E-05 44.8 18.7 114 417-532 71-205 (491)
281 PF00854 PTR2: POT family; In 94.7 0.32 6.8E-06 50.1 11.7 118 436-557 2-122 (372)
282 KOG0637|consensus 94.5 0.048 1E-06 55.7 4.7 157 370-528 32-200 (498)
283 PRK03612 spermidine synthase; 92.7 4.8 0.0001 43.4 16.5 49 505-553 143-192 (521)
284 PF01733 Nucleoside_tran: Nucl 92.6 0.037 8.1E-07 55.3 0.3 38 489-526 266-303 (309)
285 PF02487 CLN3: CLN3 protein; 92.5 0.25 5.5E-06 50.5 6.1 125 44-173 264-394 (402)
286 KOG1479|consensus 92.3 15 0.00032 37.7 18.1 30 114-143 116-146 (406)
287 TIGR00939 2a57 Equilibrative N 92.2 2.2 4.9E-05 44.7 12.9 19 416-434 56-74 (437)
288 COG3202 ATP/ADP translocase [E 91.8 17 0.00037 38.1 18.0 116 417-533 74-210 (509)
289 KOG1479|consensus 91.2 4.6 0.0001 41.3 13.2 60 372-431 19-82 (406)
290 KOG3098|consensus 89.2 5.7 0.00012 41.6 12.4 106 408-527 53-158 (461)
291 PF06779 DUF1228: Protein of u 89.2 3 6.6E-05 32.3 7.8 66 389-454 10-76 (85)
292 KOG1237|consensus 81.8 27 0.00058 38.1 13.5 149 407-555 75-242 (571)
293 PF13000 Acatn: Acetyl-coenzym 81.7 10 0.00022 39.9 9.6 30 425-454 60-90 (544)
294 KOG3880|consensus 81.4 2.9 6.2E-05 40.8 5.2 99 64-167 64-163 (409)
295 KOG3574|consensus 76.5 84 0.0018 32.2 13.6 77 371-454 32-118 (510)
296 KOG4332|consensus 74.9 9.7 0.00021 36.5 6.5 33 417-449 84-116 (454)
297 KOG2601|consensus 72.9 52 0.0011 33.4 11.2 37 409-445 67-103 (503)
298 KOG3880|consensus 72.1 7.8 0.00017 37.9 5.3 113 56-173 281-401 (409)
299 KOG3097|consensus 70.1 1.2E+02 0.0027 30.3 16.0 99 71-170 67-177 (390)
300 PF03547 Mem_trans: Membrane t 61.7 28 0.00062 35.8 7.7 14 419-432 9-22 (385)
301 PF07857 DUF1632: CEO family ( 58.0 49 0.0011 31.7 7.8 26 503-528 75-100 (254)
302 PF07672 MFS_Mycoplasma: Mycop 54.2 50 0.0011 31.7 7.1 101 65-165 144-254 (267)
303 KOG2881|consensus 54.1 55 0.0012 31.1 7.1 25 424-448 259-283 (294)
304 COG4769 Predicted membrane pro 53.8 24 0.00052 30.8 4.4 52 71-128 82-133 (181)
305 KOG2601|consensus 52.3 89 0.0019 31.8 8.6 32 494-525 409-440 (503)
306 COG5336 Uncharacterized protei 48.8 51 0.0011 26.5 5.2 35 62-96 42-77 (116)
307 PF01733 Nucleoside_tran: Nucl 43.7 8.7 0.00019 38.3 0.4 105 67-171 187-305 (309)
308 PF06912 DUF1275: Protein of u 43.5 2.7E+02 0.0058 25.7 11.9 27 151-177 167-193 (209)
309 PF11947 DUF3464: Protein of u 41.2 69 0.0015 27.9 5.4 33 490-522 113-145 (153)
310 KOG3810|consensus 41.0 82 0.0018 31.8 6.4 93 65-157 274-369 (433)
311 PF07760 DUF1616: Protein of u 39.1 3E+02 0.0065 27.0 10.3 70 103-173 8-77 (287)
312 KOG4255|consensus 35.4 4.8E+02 0.01 26.2 10.8 18 384-401 24-41 (439)
313 PF11947 DUF3464: Protein of u 35.0 1.8E+02 0.004 25.4 7.0 52 113-166 95-146 (153)
314 PF02990 EMP70: Endomembrane p 33.0 2.6E+02 0.0057 30.2 9.6 26 410-435 302-327 (521)
315 COG4262 Predicted spermidine s 31.9 75 0.0016 31.9 4.6 113 58-173 39-162 (508)
316 PRK10263 DNA translocase FtsK; 31.0 2.2E+02 0.0047 34.2 8.8 19 415-433 62-80 (1355)
317 PF06027 DUF914: Eukaryotic pr 30.0 5.9E+02 0.013 25.7 11.1 20 415-434 177-196 (334)
318 PRK10697 DNA-binding transcrip 25.9 77 0.0017 26.3 3.1 31 300-330 57-87 (118)
319 PF10183 ESSS: ESSS subunit of 24.4 1.3E+02 0.0029 24.4 4.2 39 528-566 51-89 (105)
320 PF10225 DUF2215: Uncharacteri 23.9 6.5E+02 0.014 24.1 12.9 78 111-191 30-113 (249)
321 PF06341 DUF1056: Protein of u 23.6 1.8E+02 0.0039 21.0 4.1 37 113-149 26-62 (63)
322 PF02632 BioY: BioY family; I 22.5 2.7E+02 0.0059 24.2 6.0 25 69-93 60-84 (148)
323 TIGR01666 YCCS hypothetical me 22.4 8E+02 0.017 27.7 11.1 54 80-133 41-99 (704)
324 PF15050 SCIMP: SCIMP protein 22.1 1.4E+02 0.0031 24.5 3.8 13 175-187 4-16 (133)
325 COG1268 BioY Uncharacterized c 22.1 2.2E+02 0.0048 25.8 5.5 25 69-93 89-113 (184)
326 PF11368 DUF3169: Protein of u 21.6 7.1E+02 0.015 23.7 10.1 20 151-170 11-30 (248)
327 COG5336 Uncharacterized protei 20.9 2E+02 0.0043 23.3 4.3 36 502-537 37-72 (116)
328 PF04346 EutH: Ethanolamine ut 20.9 7E+02 0.015 25.2 9.1 115 64-180 49-170 (354)
329 COG4262 Predicted spermidine s 20.0 9.4E+02 0.02 24.6 13.1 42 510-551 142-184 (508)
No 1
>KOG0569|consensus
Probab=100.00 E-value=1.4e-43 Score=361.63 Aligned_cols=405 Identities=24% Similarity=0.398 Sum_probs=344.1
Q ss_pred hhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc---cchhHHHHHHHHHhhhhhhHhh-hHhHH
Q psy10231 64 ASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS---KGFTLLCVGRFITGMAIGMSSA-CYVYV 139 (607)
Q Consensus 64 ~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a---~~~~~l~~~R~l~G~g~g~~~~-~~~~i 139 (607)
.+.+.+++.+|.++|+++.|.++||+|||..++++.++..++.++..++ +++.+++++|++.|+..|.... .+.|+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5778899999999999999999999999999999999998888877765 7899999999999999999999 99999
Q ss_pred hhccCCCccccccchhhHHHHHHHHHHHHHhhhhhHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccc
Q psy10231 140 AEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIP 219 (607)
Q Consensus 140 ~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~ 219 (607)
.|..|++.||....+.+.+..+|.+++..++.--
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~---------------------------------------------- 175 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPS---------------------------------------------- 175 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHH----------------------------------------------
Confidence 9999999999999999999999999986665321
Q ss_pred cchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHH
Q psy10231 220 SKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVG 299 (607)
Q Consensus 220 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~ 299 (607)
++|....|++.+....+++++.
T Consensus 176 ----------------------------------------------------------ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 176 ----------------------------------------------------------LLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred ----------------------------------------------------------hcCCCcchHHHHHHHHHHHHHH
Confidence 1222233444444445555555
Q ss_pred HhhhccccCChHHHHH-hCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHH
Q psy10231 300 FAAMHAVPETPSWLAR-QGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGF 378 (607)
Q Consensus 300 ~~~~~~~~esp~~l~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (607)
++..+++||||||+.. +++.++|++.++++++.++++++..++.++..+++.++.+..+.++++++++.++...+.+.+
T Consensus 198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v 277 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVV 277 (485)
T ss_pred HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHH
Confidence 5588999999999988 799999999999999877554444333333333334445778999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhh
Q psy10231 379 FLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEY 457 (607)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~ 457 (607)
...+++++.+...+|...++++.|++.+ +.......+...++.++++.++.||+|||++++.+..++.+..+++.....
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~ 357 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALF 357 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999655 567888889999999999999999999999999999999988888777665
Q ss_pred hhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhH
Q psy10231 458 YFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMG 537 (607)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~ 537 (607)
...... ....+..+.+.+++...+..|.+|++|.+.+|++|++.|+.++++...+.++..++....++.+.+..|.
T Consensus 358 l~~~~~---~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~- 433 (485)
T KOG0569|consen 358 LSNSFG---SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP- 433 (485)
T ss_pred HHHHhh---hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 544311 2233455778888999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCHHHHHHHhhcc
Q psy10231 538 GMMWAFSCACLLAMVFIQAFLPETQGKTLLEIENHFRGK 576 (607)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (607)
..|..+.+.+++..++.++++||||+|+.+|+.++.+++
T Consensus 434 ~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 434 YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 588899999999999999999999999999988887765
No 2
>KOG0254|consensus
Probab=100.00 E-value=2.5e-39 Score=347.23 Aligned_cols=433 Identities=28% Similarity=0.466 Sum_probs=353.6
Q ss_pred hhcccc--ccccccccccccCCCcccccCc----cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHH
Q psy10231 34 HCNNLT--HAIPSILIPQLQKPSSIISISS----DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWT 107 (607)
Q Consensus 34 ~~~~~~--~~~~~~~~p~l~~~~~~~~~s~----~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~ 107 (607)
+..+.+ .+..+...+.+.+......... .+.+|+.+++.++..+++++.|+++|++|||+.++++.+++.++++
T Consensus 55 ~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~i 134 (513)
T KOG0254|consen 55 LLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAI 134 (513)
T ss_pred HHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 455665 5666777777766432222222 3459999999999999999999999999999999999999999999
Q ss_pred HHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHH
Q psy10231 108 IITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAA 181 (607)
Q Consensus 108 ~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~ 181 (607)
++++++|+++++++|+++|+|.|.... .+.|++|..|++.||...+..+....+|..++..++... +||..+.+
T Consensus 135 i~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~ 214 (513)
T KOG0254|consen 135 IIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGL 214 (513)
T ss_pred HHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHH
Confidence 999999999999999999999999999 999999999999999999999999999999997777766 47766666
Q ss_pred hHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 182 CAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 182 ~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
..+++++..+
T Consensus 215 ~~i~~~~~~~---------------------------------------------------------------------- 224 (513)
T KOG0254|consen 215 ALIPAVILAL---------------------------------------------------------------------- 224 (513)
T ss_pred HHHHHHHHHH----------------------------------------------------------------------
Confidence 6666666555
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhc-CchhhhhHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRR-STAVADAEL 340 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 340 (607)
..+++||||+|+.++++.++++..++++++ .+.+.+.+.
T Consensus 225 ----------------------------------------~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~ 264 (513)
T KOG0254|consen 225 ----------------------------------------GMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVEL 264 (513)
T ss_pred ----------------------------------------HHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHH
Confidence 577788999999999999999999999988 445555566
Q ss_pred HHHHHHHHHhhcCCccc-hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Q psy10231 341 KEIQQSLKVQMAGSSMD-HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASIIVAGLRF 419 (607)
Q Consensus 341 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 419 (607)
++++.....+....... .+.++++ +..+++.++.+.+..++++++.+...+|.+.+++..|.+.+......+.++..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~ 343 (513)
T KOG0254|consen 265 ELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNF 343 (513)
T ss_pred HHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 66652222222222222 3455554 778888999999999999999999999999999998886554677778888899
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++..++.++.||+|||++++.+...+.++.++++.................+..+...+++...+..++.+++|.+.+|.
T Consensus 344 ~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEi 423 (513)
T KOG0254|consen 344 LGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEI 423 (513)
T ss_pred HHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhcc
Confidence 99999999999999999999999999999998887655543211123345677788888899999999999999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHH-HhhhcccCCCCCCHHHHHHHhhccC
Q psy10231 500 FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMV-FIQAFLPETQGKTLLEIENHFRGKK 577 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (607)
+|.+.|+.+.++.....++...+....+....+..+....|..+++++.+..+ ++++++||||++++||+++..+++.
T Consensus 424 fp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~ 502 (513)
T KOG0254|consen 424 FPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGI 502 (513)
T ss_pred CcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCC
Confidence 99999999999999999999998877777777665534577777777777777 7888999999999999988776554
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.7e-38 Score=345.36 Aligned_cols=415 Identities=16% Similarity=0.220 Sum_probs=308.9
Q ss_pred hccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccc
Q psy10231 35 CNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKG 114 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~ 114 (607)
.++++....+.++|.+.+ +++++..+.+++.++++++.+++++++|+++||+|||++++++++++++++++++++++
T Consensus 178 ~~g~d~~~is~ilp~i~~---~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s 254 (742)
T TIGR01299 178 ADGVEVFVVGFVLPSAEK---DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQG 254 (742)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346666677888899888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVG 189 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~ 189 (607)
++.++++|+++|++.|+..+ ..+++.|++|+++|++.++++..++.+|.++++.++..+ +|+.....
T Consensus 255 ~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~-------- 326 (742)
T TIGR01299 255 YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGS-------- 326 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccc--------
Confidence 99999999999999999999 999999999999999999999999999999988777543 23221000
Q ss_pred HHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHH
Q psy10231 190 FAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFV 269 (607)
Q Consensus 190 ~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~ 269 (607)
T Consensus 327 -------------------------------------------------------------------------------- 326 (742)
T TIGR01299 327 -------------------------------------------------------------------------------- 326 (742)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhh----hhH--HHHH
Q psy10231 270 SLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVA----DAE--LKEI 343 (607)
Q Consensus 270 ~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~--~~~~ 343 (607)
.-...+||+.+.+.+++.++.++..+++||||+|+..+++.+++.+.++++++.+... .+. .+.+
T Consensus 327 ---------~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~ 397 (742)
T TIGR01299 327 ---------AYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI 397 (742)
T ss_pred ---------ccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH
Confidence 0012468888888888888888888899999999999999999999999887665321 111 1111
Q ss_pred HHHHHH------hhcCC----------------ccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q psy10231 344 QQSLKV------QMAGS----------------SMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA 401 (607)
Q Consensus 344 ~~~~~~------~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (607)
+..... ++... .+.+++++| +++++++.+....+ +++...+++.+..|.|.+++..
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf-~~~~~~~tl~l~~~-wf~~~~~yygl~~w~P~~~~~~ 475 (742)
T TIGR01299 398 KTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCF-NPEVREITIKLMGV-WFTLSFGYYGLSVWFPDMIKHL 475 (742)
T ss_pred HHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHc-CccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 111000 00000 011345555 44555555555444 4556667899999999875431
Q ss_pred ------------------------------------------CC---------C--------------------------
Q psy10231 402 ------------------------------------------GS---------S-------------------------- 404 (607)
Q Consensus 402 ------------------------------------------g~---------~-------------------------- 404 (607)
|+ +
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 555 (742)
T TIGR01299 476 QADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTL 555 (742)
T ss_pred HHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhh
Confidence 00 0
Q ss_pred ----------------------------------c-----chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHH
Q psy10231 405 ----------------------------------L-----DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFM 445 (607)
Q Consensus 405 ----------------------------------~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~ 445 (607)
. ..+....+.+++.+++.+++++++||+|||+++..+.++.
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~ls 635 (742)
T TIGR01299 556 FENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLS 635 (742)
T ss_pred ccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0 0123355666888999999999999999999999888888
Q ss_pred HHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhh
Q psy10231 446 ALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVK 525 (607)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~ 525 (607)
+++++++++. ......++..+++.++ ..+..+..+++++|++|++.|++++|+.+..+++|++++|.
T Consensus 636 ai~~ll~~~~------------~s~~~ll~~~~l~g~~-~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~ 702 (742)
T TIGR01299 636 CISCFFLSFG------------NSESAMIALLCLFGGL-SIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGIL 702 (742)
T ss_pred HHHHHHHHHH------------ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877766542 1112222222333332 23345667789999999999999999999999999999999
Q ss_pred hcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCH
Q psy10231 526 MYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTL 566 (607)
Q Consensus 526 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (607)
+.+.+.+. +...++++.+++.++++++.+ ++|||+++.+
T Consensus 703 i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~l 741 (742)
T TIGR01299 703 IFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTRGQVL 741 (742)
T ss_pred HHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCccccc
Confidence 99988764 455577777777777666655 5599988653
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=8.1e-39 Score=343.25 Aligned_cols=439 Identities=19% Similarity=0.173 Sum_probs=302.2
Q ss_pred hhhccccccccccccccccCC--CcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKP--SSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~--~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
.+.+++|.+..+.+.|.+..+ ..+.+.++.+.+++.+.+.++..+++++.|+++||+|||+++.++.+++.+++++++
T Consensus 25 ~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~ 104 (502)
T TIGR00887 25 FFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASG 104 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 357888988888888877652 112345667889999999999999999999999999999999999999999999999
Q ss_pred hccc------hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhhhHHHHHHHhH
Q psy10231 111 VSKG------FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACA 183 (607)
Q Consensus 111 ~a~~------~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f~~~~ 183 (607)
++++ ++.++++|+++|++.|...+ ..+++.|++|+++|++++++......+|.++++.++..+.+....
T Consensus 105 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~---- 180 (502)
T TIGR00887 105 LSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKH---- 180 (502)
T ss_pred HccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9876 78999999999999999999 999999999999999999999999999999988776532100000
Q ss_pred HHHHHHHHHHhcCCCChhhH-hhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCccccc
Q psy10231 184 VVALVGFAAMHAVPETPSWL-ARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLS 262 (607)
Q Consensus 184 ~~~~~~~~~~~~~pes~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~ 262 (607)
..+.+.+. +...++
T Consensus 181 ------------~~~~~~~~~~~~~~~----------------------------------------------------- 195 (502)
T TIGR00887 181 ------------SLEAAADEASCTGSC----------------------------------------------------- 195 (502)
T ss_pred ------------ccccccccccccccc-----------------------------------------------------
Confidence 00000000 000000
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChH-HHHHHHHHHhcCchh-hhhHH
Q psy10231 263 AFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTK-EARNSLVWFRRSTAV-ADAEL 340 (607)
Q Consensus 263 ~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~-~~~~~l~~~~~~~~~-~~~~~ 340 (607)
......+||+.+.+..+++++.++..+++||||+|+..+++.+ ++++.+++..+.+.+ ..++.
T Consensus 196 ---------------~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 260 (502)
T TIGR00887 196 ---------------VPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEV 260 (502)
T ss_pred ---------------cchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccc
Confidence 0001136888888888888887788889999999998887764 466666655443211 11111
Q ss_pred HHHHHHHHHhhcCCccchhhhhhccC---cchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hH--------
Q psy10231 341 KEIQQSLKVQMAGSSMDHCAQTFTNS---AVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DY-------- 408 (607)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~-------- 408 (607)
++.++ ++ +....+++++++++ +.++ ..+......+.....++....|.|.++++.|++.. ..
T Consensus 261 ~~~~~----~~-~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~ 334 (502)
T TIGR00887 261 EKAST----AV-EVPKASWSDFFTHFFKWRHGK-HLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELY 334 (502)
T ss_pred cchhc----cc-cchhhhHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHH
Confidence 11111 11 11123567777643 2222 22222233333333456667778998887776432 10
Q ss_pred ----HHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHH
Q psy10231 409 ----VASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCAS 484 (607)
Q Consensus 409 ----~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (607)
....+..++.+++.++.++++||+|||++++.+..+..+++.+++..... ..........+.+...+
T Consensus 335 ~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~ 405 (502)
T TIGR00887 335 KTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH---------LSTHGFLAIYVLAQFFA 405 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh---------cchhHHHHHHHHHHHHH
Confidence 02233345566788899999999999999888877777666655542110 01111222222223334
Q ss_pred HhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh----------hhhHHHHHHHHHHHHHHHHHh
Q psy10231 485 MLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL----------LNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 485 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 554 (607)
..+..+..+.+.+|.+|++.|+++.|+.+.++++++++++.+.+.+.+. .++...+++++++++++.++
T Consensus 406 ~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~- 484 (502)
T TIGR00887 406 NFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF- 484 (502)
T ss_pred hcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-
Confidence 4556677788899999999999999999999999999999999998874 33455778888888777665
Q ss_pred hhcccCCCCCCHHHHHH
Q psy10231 555 QAFLPETQGKTLLEIEN 571 (607)
Q Consensus 555 ~~~~~~~~~~~~~~~~~ 571 (607)
.+++|||+++++||+++
T Consensus 485 ~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 485 TLLIPETKGKSLEELSG 501 (502)
T ss_pred heEeccCCCCCHHhhhC
Confidence 46779999999887643
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=4.3e-37 Score=329.19 Aligned_cols=417 Identities=26% Similarity=0.388 Sum_probs=304.5
Q ss_pred hhccccccccccccccccCCC-----cccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHH
Q psy10231 34 HCNNLTHAIPSILIPQLQKPS-----SIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTI 108 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~-----~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~ 108 (607)
+.+++|.++.++..|.+++.. .+++.++.+.+++.+++.++..++++++|+++||+|||++++++.+++.++.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~ 101 (479)
T PRK10077 22 LLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALG 101 (479)
T ss_pred HhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 567889998888888877721 133888999999999999999999999999999999999999999999999988
Q ss_pred HHhc------------cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh--
Q psy10231 109 ITVS------------KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-- 173 (607)
Q Consensus 109 ~a~a------------~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-- 173 (607)
++++ ++++.++++|+++|++.|...+ ..+++.|++|+++|++++++.+.+..+|.++++.++..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 181 (479)
T PRK10077 102 SAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIAR 181 (479)
T ss_pred HHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8863 2256788999999999999999 999999999999999999999999999999887765432
Q ss_pred ----------hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhh
Q psy10231 174 ----------TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSS 243 (607)
Q Consensus 174 ----------~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 243 (607)
+||+.|++.+++.++..+
T Consensus 182 ~~~~~~~~~~gWr~~f~~~~~~~~~~~~---------------------------------------------------- 209 (479)
T PRK10077 182 SGDASWLNTDGWRYMFASEAIPALLFLM---------------------------------------------------- 209 (479)
T ss_pred cCcccccccCChHHHHHHHHHHHHHHHH----------------------------------------------------
Confidence 678777776666655444
Q ss_pred hHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHH
Q psy10231 244 ACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEAR 323 (607)
Q Consensus 244 ~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~ 323 (607)
..+++||+|+|+..+++.++++
T Consensus 210 ----------------------------------------------------------~~~~l~~s~~~l~~~~~~~~~~ 231 (479)
T PRK10077 210 ----------------------------------------------------------LLYFVPETPRYLMSRGKQEQAE 231 (479)
T ss_pred ----------------------------------------------------------HHHcCCCCcHHHHHcCCHHHHH
Confidence 4455677777776666666666
Q ss_pred HHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC
Q psy10231 324 NSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGS 403 (607)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 403 (607)
...++..+.++ .++..++.++..++++.. ....+.. ........+....+.+..+.+...+|.|.+.++.|.
T Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~ 303 (479)
T PRK10077 232 GILRKIMGNTL-ATQALQEIKHSLDHGRKT-----GGKLLMF--GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA 303 (479)
T ss_pred HHHHHHcCChh-HHHHHHHHHHHHHHhhhh-----hhhhcch--hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC
Confidence 55555443321 111222222211111000 0111110 011222233334445555666777888998888777
Q ss_pred Ccc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHH
Q psy10231 404 SLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVC 482 (607)
Q Consensus 404 ~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (607)
+.. ........++..+++.++.++++||+|||+.++.+.+..+++.+.+...... +..........+.+..
T Consensus 304 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~--------~~~~~~~~~~~~~~~~ 375 (479)
T PRK10077 304 STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--------QAPGIVALLSMLFYVA 375 (479)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHH
Confidence 544 4555666778889999999999999999999999988888877766542211 1222233334444455
Q ss_pred HHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHH------HhhhhHHHHHHHHHHHHHHHHHhhh
Q psy10231 483 ASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLM------YLLNMGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 483 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~------~~~g~~~~~~~~~~~~~~~~~~~~~ 556 (607)
++.....+..+.++.|.+|++.|+++.|+.+.+++++.++++.+.+.+. +..++...|+++++++++++++.++
T Consensus 376 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 376 AFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred HHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 5555555777899999999999999999999999999999987776554 4567777888888888888888888
Q ss_pred cccCCCCCCHHHHHHHhhcc
Q psy10231 557 FLPETQGKTLLEIENHFRGK 576 (607)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~ 576 (607)
+.||+|+++.+|.++..++.
T Consensus 456 ~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 456 FVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred ccccCCCCCHHHHHHHHhhc
Confidence 88999999998877765443
No 6
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.9e-36 Score=324.76 Aligned_cols=388 Identities=20% Similarity=0.257 Sum_probs=289.5
Q ss_pred cccccccCCCcccccC---ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 45 ILIPQLQKPSSIISIS---SDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s---~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
...|.+.+ |++++ +.+.+++.+++.++..+++++.|+++||+|||++++++.++..++++++++++|++.++++
T Consensus 110 ~~~~~i~~---e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (505)
T TIGR00898 110 TFSSTIVT---EWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVF 186 (505)
T ss_pred cccccEEE---EecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 45677777 99998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHHHHHHHHHhcCCCC
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVALVGFAAMHAVPET 199 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~~~~~~~~~~~pes 199 (607)
|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|.++++.++..+ +||+.|++.+++.++..+
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~-------- 258 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFL-------- 258 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999 999999999999999999999999999999999998877 899999988887766655
Q ss_pred hhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHH
Q psy10231 200 PSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSL 279 (607)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 279 (607)
T Consensus 259 -------------------------------------------------------------------------------- 258 (505)
T TIGR00898 259 -------------------------------------------------------------------------------- 258 (505)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhh-HHHHHHHHHHHhhcCCccch
Q psy10231 280 GYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADA-ELKEIQQSLKVQMAGSSMDH 358 (607)
Q Consensus 280 ~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 358 (607)
..+++||+|+|+..+++.+++.+.+++..+.++.... +..+.+.+ +++++.....+
T Consensus 259 ----------------------~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 315 (505)
T TIGR00898 259 ----------------------LSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLE-KDLSSSKKQYS 315 (505)
T ss_pred ----------------------HHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhh-hhhhhccCCCc
Confidence 4466788888888888888888777776554432211 11111101 11111122357
Q ss_pred hhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHH-HHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhcccCCchh
Q psy10231 359 CAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVN-FFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMFSRRAL 437 (607)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~ 437 (607)
+++++++++.++..+......+. ....+|... +..+.+ .+......+.++..+++.++.+++.||+|||+.
T Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~ 387 (505)
T TIGR00898 316 FLDLFRTPNLRKTTLCLMMLWFT------TAFSYYGLVLDLGNLG--GNIYLDLFISGLVELPAKLITLLLIDRLGRRYT 387 (505)
T ss_pred HHHHhCChHHHHHHHHHHHHHHH------HHHHHHHHhccccccC--CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 78899988777655444333221 112222222 222222 234555666778888999999999999999999
Q ss_pred HHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHH
Q psy10231 438 ATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGY 517 (607)
Q Consensus 438 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 517 (607)
+..+.++.+++.+++.+. + ....+......++.. ++.....+..+.+..|.+|++.|+++.|+.+++++
T Consensus 388 ~~~~~~~~~~~~l~~~~~---~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 456 (505)
T TIGR00898 388 MAASLLLAGVALLLLLFV---P-------VDLYFLRTALAVLGK-FGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMAR 456 (505)
T ss_pred HHHHHHHHHHHHHHHHHc---C-------CCchHHHHHHHHHHH-HHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHH
Confidence 988888777776655442 1 111122222222222 22233345667899999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHHH
Q psy10231 518 LFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLLE 568 (607)
Q Consensus 518 ~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (607)
+|++++|.+.+ .+..+...++++++++.+++.++. +++|||++++++|
T Consensus 457 ig~~i~p~i~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 457 VGSIISPFLVY--LGEKWLFLPLVLFGGLALLAGILT-LFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHhHHHH--HHHHHHhhHHHHHHHHHHHHHHHH-HcCcCCCCCCCCC
Confidence 99999999988 444566678888888887776665 4569999877643
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.3e-42 Score=368.87 Aligned_cols=422 Identities=29% Similarity=0.452 Sum_probs=325.3
Q ss_pred hhccccccccccccccccCCCcc-ccc-------CccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHH
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSI-ISI-------SSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIG 105 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~-~~~-------s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~ 105 (607)
+.+|+|.+..+...+........ .+. ++.+.+++.++..+|..+|+++.|.++||+|||++++++.++..++
T Consensus 10 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~ 89 (451)
T PF00083_consen 10 FLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIG 89 (451)
T ss_pred HHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccc
Confidence 56788887776665555421101 111 2345789999999999999999999999999999999999999999
Q ss_pred HHHHHhcc---chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----h---
Q psy10231 106 WTIITVSK---GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----T--- 174 (607)
Q Consensus 106 ~~~~a~a~---~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~--- 174 (607)
+++.++++ |++.+.++|+++|++.|+..+ ...++.|..|+++|++..++.+.++.+|.+++..++..+ +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 169 (451)
T PF00083_consen 90 SILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWG 169 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999 999999999999999999999 999999999999999999999999999999887776543 3
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcC
Q psy10231 175 WQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICL 254 (607)
Q Consensus 175 Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~ 254 (607)
||+.+++..+++++..+
T Consensus 170 Wr~~~~~~~~~~l~~~~--------------------------------------------------------------- 186 (451)
T PF00083_consen 170 WRILLIFGAIPSLLVLL--------------------------------------------------------------- 186 (451)
T ss_pred ccccccccccccccccc---------------------------------------------------------------
Confidence 66666666555554443
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCch
Q psy10231 255 PNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTA 334 (607)
Q Consensus 255 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~ 334 (607)
..+++||||+|+..++|.+++++.++++++.+.
T Consensus 187 -----------------------------------------------~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~ 219 (451)
T PF00083_consen 187 -----------------------------------------------LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEI 219 (451)
T ss_pred -----------------------------------------------cccccccccceeccccccccccccccccccccc
Confidence 667788888888888888888888887655432
Q ss_pred hhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHHH
Q psy10231 335 VADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASIIV 414 (607)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 414 (607)
++ ++.++.+++.++++ +...++.+++++++.++++...+.+..+.+..+.+....|.+.++++.+.+.+ .....+.
T Consensus 220 ~~-~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~-~~~~~~~ 295 (451)
T PF00083_consen 220 ED-EEIEEIKAEKKESQ--ESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS-FLATLIL 295 (451)
T ss_pred cc-cccccccccccccc--ccceeeeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 22 22222222222211 11267888888877777778788788877788888888888988887776544 4455566
Q ss_pred HHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhh
Q psy10231 415 AGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWV 494 (607)
Q Consensus 415 ~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (607)
.+...++.+++.++.||+|||+.++.+...++++.+.++.......+ .+.......+....++...+..++.+..+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~ 372 (451)
T PF00083_consen 296 GLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVS---SSSWWSILSIVFLALFFAFFSLGWGPLPWI 372 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccceeeeeccccccccccccccc
Confidence 67777888888899999999999999888888777766511111110 001123344444555556666677888889
Q ss_pred hhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHHHHHHH
Q psy10231 495 MIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLLEIENH 572 (607)
Q Consensus 495 ~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (607)
+++|++|++.|+++.|+...++++++++.+.+.+.+.+..+....+.++++++++..++.++++||||+++++|+++.
T Consensus 373 ~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 373 YTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 999999999999999999999999999999999988888875568888888888888898999999999999998765
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=4.8e-35 Score=313.17 Aligned_cols=417 Identities=26% Similarity=0.453 Sum_probs=298.0
Q ss_pred hccccccccccccccccCCCcccccC--------ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHH
Q psy10231 35 CNNLTHAIPSILIPQLQKPSSIISIS--------SDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGW 106 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l~~~~~~~~~s--------~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~ 106 (607)
+.+++....+...|.+.. +++.+ ..+.+++.+.+.++..+++++.|+++||+|||++++++.+++.++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 115 (481)
T TIGR00879 39 MFGYDTGVIGGALALPAF---EFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGA 115 (481)
T ss_pred hcccccchhhhhhhcHHH---HHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHH
Confidence 455667777777887776 66655 8999999999999999999999999999999999999999999999
Q ss_pred HHHHhc---cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHh---hhh----hH
Q psy10231 107 TIITVS---KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLG---YIV----TW 175 (607)
Q Consensus 107 ~~~a~a---~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~---~~l----~W 175 (607)
++++++ .+++.++++|+++|+|.+...+ ..+++.|++|+++|++++++...+..+|..+++.++ ... +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w 195 (481)
T TIGR00879 116 ILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGW 195 (481)
T ss_pred HHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccH
Confidence 999664 3456899999999999999999 999999999999999999999999999999999998 433 89
Q ss_pred HHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCC
Q psy10231 176 QYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLP 255 (607)
Q Consensus 176 r~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~ 255 (607)
|+.|++.++..++..+..++
T Consensus 196 ~~~f~~~~~~~~~~~~~~~~------------------------------------------------------------ 215 (481)
T TIGR00879 196 RIPLGLQLIPAGLLFLGLFF------------------------------------------------------------ 215 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhc------------------------------------------------------------
Confidence 99999876666655553334
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchh
Q psy10231 256 NDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAV 335 (607)
Q Consensus 256 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~ 335 (607)
+||+|+++..+++.+++++..++.++.+..
T Consensus 216 --------------------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (481)
T TIGR00879 216 --------------------------------------------------LPESPRWLVGKGRVEEARKSLARLRGTSGE 245 (481)
T ss_pred --------------------------------------------------CCCChHHHHHcCChHHHHHHHHHHhCCCCC
Confidence 445554444444433333333332222111
Q ss_pred hhhHHH---HHHHHHHHhhcCCccchhhhhhccCc-chHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHH
Q psy10231 336 ADAELK---EIQQSLKVQMAGSSMDHCAQTFTNSA-VWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVA 410 (607)
Q Consensus 336 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 410 (607)
.....+ ..+...+.+.+ .....+.+.++..+ ..++.+....+..+......+...++.|.+.++.|.+.. ....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 324 (481)
T TIGR00879 246 DKELLDELELIDIKRSIEKR-SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLV 324 (481)
T ss_pred cHHHHHHHHHHHHHHHHHHh-hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHH
Confidence 111110 00011111111 11111333333221 233444455555555555556677888888888777553 4556
Q ss_pred HHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccch
Q psy10231 411 SIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQ 490 (607)
Q Consensus 411 ~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (607)
.....+..+++.++.+++.||++||+.+..+..+.+++.+.++........ ..+....+..+.....+..++..+..+
T Consensus 325 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (481)
T TIGR00879 325 SIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVT--GSSKSSGNVAIVFILLFIAFFAMGWGP 402 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccC--CcccchhHHHHHHHHHHHHHHHccccC
Confidence 677788889999999999999999999888877777776666532211110 000011333444445555556666667
Q ss_pred hhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHH
Q psy10231 491 LPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLL 567 (607)
Q Consensus 491 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (607)
....+..|.+|++.|+++.|+.+...++++++++.+.+.+.+..++...|++.++++++++++.+++.||+++++.+
T Consensus 403 ~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 403 VPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred eehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 77788899999999999999999999999999999999999998998889999999888888888888988876643
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.4e-34 Score=309.32 Aligned_cols=384 Identities=15% Similarity=0.189 Sum_probs=256.2
Q ss_pred HhhhccccccccccccccccCCCcccccCccc-hhHH-----HHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHH
Q psy10231 32 KLHCNNLTHAIPSILIPQLQKPSSIISISSDD-ASWI-----ASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIG 105 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~-~~~i-----~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~ 105 (607)
..+++++|.+..+...|.+.+ +++.+.++ .+++ .++.++++.+++++.|+++||+|||+++.+++++++++
T Consensus 24 g~~~~~~d~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~ 100 (490)
T PRK10642 24 GNAMEWFDFGVYGFVAYALGK---VFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSIS 100 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 346788999999999999988 77544433 2332 47788999999999999999999999999999999999
Q ss_pred HHHHHhccchhH--------HHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhh----
Q psy10231 106 WTIITVSKGFTL--------LCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYI---- 172 (607)
Q Consensus 106 ~~~~a~a~~~~~--------l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~---- 172 (607)
++++++++|+.+ ++++|+++|++.|+.++ ..+++.|++|+++||++.++...+..+|..+++.+...
T Consensus 101 ~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~ 180 (490)
T PRK10642 101 TFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTI 180 (490)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999875 88999999999999999 99999999999999999999988888888877654422
Q ss_pred --------hhHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhh
Q psy10231 173 --------VTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSA 244 (607)
Q Consensus 173 --------l~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 244 (607)
.|||+.|++.+++++
T Consensus 181 ~~~~~~~~~gWR~~f~i~~~~~l--------------------------------------------------------- 203 (490)
T PRK10642 181 VGEANFLDWGWRIPFFIALPLGI--------------------------------------------------------- 203 (490)
T ss_pred cCHHHhcCccHHHHHHHHHHHHH---------------------------------------------------------
Confidence 156666655444333
Q ss_pred HHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHH
Q psy10231 245 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARN 324 (607)
Q Consensus 245 ~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~ 324 (607)
+.++....+||+|+|...+++.++..
T Consensus 204 -----------------------------------------------------~~~~~~~~~~esp~~~~~~~~~~~~~- 229 (490)
T PRK10642 204 -----------------------------------------------------IGLYLRHALEETPAFQQHVDKLEQGD- 229 (490)
T ss_pred -----------------------------------------------------HHHHHHHcCCCChhHHHHHHhhhhhc-
Confidence 33335566788887653321111000
Q ss_pred HHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCC
Q psy10231 325 SLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGS 403 (607)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 403 (607)
++ ...+....++++++++ .++......... +.....++.+..|.|.++++ .|.
T Consensus 230 ------~~-----------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~l~~~~g~ 283 (490)
T PRK10642 230 ------RE-----------------GLQDGPKVSFKEIATK--HWRSLLTCIGLV-IATNVTYYMLLTYMPSYLSHNLHY 283 (490)
T ss_pred ------cc-----------------cccccccCCHHHHHHH--hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 00 0000111234445543 233333333222 23344567788899999864 466
Q ss_pred Ccc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHH
Q psy10231 404 SLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVC 482 (607)
Q Consensus 404 ~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (607)
+.. .........++.+++.++.|+++||+|||+.+..+.+...+....+... .. ............+...
T Consensus 284 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~g~ 354 (490)
T PRK10642 284 SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFIL--IN-------SNVIGLIFAGLLMLAV 354 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH--Hh-------CCCHHHHHHHHHHHHH
Confidence 543 3445555667788899999999999999998877665433322221110 00 0111222222222222
Q ss_pred HHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 483 ASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 483 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
..+.. ......+..|.+|++.|+++.|+.+.++.+++.++|.+.+.+.+..+ +..++++..+.++++.+.. +++||+
T Consensus 355 ~~~~~-~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes 432 (490)
T PRK10642 355 ILNCF-TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKET 432 (490)
T ss_pred HHHHH-HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccc
Confidence 22222 23344677899999999999999888888888999999998887654 4555555555555555544 456998
Q ss_pred CCCCH
Q psy10231 562 QGKTL 566 (607)
Q Consensus 562 ~~~~~ 566 (607)
+++..
T Consensus 433 ~~~~~ 437 (490)
T PRK10642 433 ANRPL 437 (490)
T ss_pred cCCCC
Confidence 76544
No 10
>KOG0252|consensus
Probab=100.00 E-value=4.2e-34 Score=279.58 Aligned_cols=428 Identities=18% Similarity=0.167 Sum_probs=306.6
Q ss_pred hhhccccccccccccccccCCCcc-----cccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSI-----ISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWT 107 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~-----~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~ 107 (607)
++.+++|...++.+.|.+..+.-. =|.++...+.+..+..+|..+|+++.|+++||+|||+++...++++.++++
T Consensus 50 fftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~ 129 (538)
T KOG0252|consen 50 FFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSA 129 (538)
T ss_pred hcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHH
Confidence 467888988888888877664211 136677889999999999999999999999999999999999999999999
Q ss_pred HHHhccc-------hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhhhHHHHH
Q psy10231 108 IITVSKG-------FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTS 179 (607)
Q Consensus 108 ~~a~a~~-------~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f 179 (607)
+++++.. ++++...|++.|+|.|+-+| +.+..+|...+++||...+......++|.+.|.+++-
T Consensus 130 ~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~-------- 201 (538)
T KOG0252|consen 130 LSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVAL-------- 201 (538)
T ss_pred HhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHH--------
Confidence 8888732 67888999999999999999 9999999999999999999999999999988765442
Q ss_pred HHhHHHHHHHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCc
Q psy10231 180 AACAVVALVGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDR 258 (607)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r 258 (607)
+...+. .-.++. . +...
T Consensus 202 --------Iv~~~fe~~~~~~-----~---------------~~~~---------------------------------- 219 (538)
T KOG0252|consen 202 --------IVSAIFEKIFNGP-----S---------------TYPH---------------------------------- 219 (538)
T ss_pred --------HHHHHHhccCCCC-----C---------------CchH----------------------------------
Confidence 222211 111111 0 0000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCCh-HHHHHHHHHHhcCchhhh
Q psy10231 259 GYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCT-KEARNSLVWFRRSTAVAD 337 (607)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~-~~~~~~l~~~~~~~~~~~ 337 (607)
...-||+.+.++.+|++..++.+..+|||+++.....++ +++.+..+ +. ..
T Consensus 220 ----------------------ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~---k~---~~ 271 (538)
T KOG0252|consen 220 ----------------------LDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMK---KV---LS 271 (538)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccc---cc---cc
Confidence 012499999999999999999999999999987433322 22221111 11 01
Q ss_pred hHHHHHHHHHHHhhcCC----ccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc--hH---
Q psy10231 338 AELKEIQQSLKVQMAGS----SMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD--DY--- 408 (607)
Q Consensus 338 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~--- 408 (607)
.++++ +...+...+ ....+...+..+ .-+.++ .....++..-..++....+...++++.|.... ..
T Consensus 272 ~~~~~---~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Ll-gt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~ 346 (538)
T KOG0252|consen 272 VDIEA---ESTAESDVPPPSNSFGLFSRLFLRW-HGKHLL-GTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHEL 346 (538)
T ss_pred cccch---hhccccCCCCcccccchHHHHHHHH-HHHHHH-HHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHH
Confidence 11111 111111111 112233344333 223344 44444455555578888888888887766222 22
Q ss_pred -----HHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHH
Q psy10231 409 -----VASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCA 483 (607)
Q Consensus 409 -----~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (607)
....+..+..++|..+...++|++|||+..+.+++++.+..+.++.. +. +........++..+..++
T Consensus 347 ~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~---y~-----~~~~~~Gf~v~y~l~~ff 418 (538)
T KOG0252|consen 347 FKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGP---YN-----QLENTIGFVVLYSLTFFF 418 (538)
T ss_pred HHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCC---cc-----cccccCceeehHHHHHHH
Confidence 12233334445577777889999999999999999999888877762 11 112233344445555666
Q ss_pred HHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH-----hhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy10231 484 SMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY-----LLNMGGMMWAFSCACLLAMVFIQAFL 558 (607)
Q Consensus 484 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~ 558 (607)
...+.......+.+|.+|++.|+++.|+....+..|++++...+.++.+ ..+....+++++++++++.++.++ +
T Consensus 419 ~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~ 497 (538)
T KOG0252|consen 419 GNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL-I 497 (538)
T ss_pred HhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE-e
Confidence 6777788888999999999999999999999999999999999999999 788888999999999988877654 5
Q ss_pred cCCCCCCHHHHHHH
Q psy10231 559 PETQGKTLLEIENH 572 (607)
Q Consensus 559 ~~~~~~~~~~~~~~ 572 (607)
|||+++++||++++
T Consensus 498 pEtk~~~leei~~e 511 (538)
T KOG0252|consen 498 PETKGKSLEEISNE 511 (538)
T ss_pred ecccccCHHHhcCh
Confidence 89999999987443
No 11
>KOG0253|consensus
Probab=100.00 E-value=1.3e-32 Score=260.77 Aligned_cols=393 Identities=18% Similarity=0.223 Sum_probs=291.2
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
..+-+.|.+.. .++.+.-|..++....+.|..+++-.+|.++|++|||+.+.+..+...+...+.+.++|+..+++.
T Consensus 96 ~~s~i~~~l~~---~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f 172 (528)
T KOG0253|consen 96 LLSLILPALDE---VWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVF 172 (528)
T ss_pred HHHHHHHHHHh---hhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHH
Confidence 34566677777 888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcC
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAV 196 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~ 196 (607)
|.+.|+|.|+ .| ..++-.|..|..+|...+-+. ..+.+|.+....+.... ||||.......+..+..+
T Consensus 173 ~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~----- 245 (528)
T KOG0253|consen 173 RALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAAR----- 245 (528)
T ss_pred HHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHH-----
Confidence 9999999999 88 999999999999999888777 88999998887777655 677666665544444444
Q ss_pred CCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHH
Q psy10231 197 PETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 276 (607)
Q Consensus 197 pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~ 276 (607)
T Consensus 246 -------------------------------------------------------------------------------- 245 (528)
T KOG0253|consen 246 -------------------------------------------------------------------------------- 245 (528)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhh----------hHHHHHHHH
Q psy10231 277 YSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVAD----------AELKEIQQS 346 (607)
Q Consensus 277 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~ 346 (607)
..+++|||||+...+++++++...++++.+.|...- ++.++.+.+
T Consensus 246 -------------------------f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~ 300 (528)
T KOG0253|consen 246 -------------------------FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESD 300 (528)
T ss_pred -------------------------HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhc
Confidence 778889999999999999999999998887774321 111111111
Q ss_pred HHHh--hc-CCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhC--------------------C
Q psy10231 347 LKVQ--MA-GSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAG--------------------S 403 (607)
Q Consensus 347 ~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------------~ 403 (607)
..+. +. ++...+..+++ .|++++..+....+++. +...++........+++... .
T Consensus 301 ~~~~~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwfg-nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~ 378 (528)
T KOG0253|consen 301 LDDSKSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWFG-NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPL 378 (528)
T ss_pred hhhhhhccccccccchHhhc-ChHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCc
Confidence 1111 11 11223334444 56777766655555543 33334444444444443211 0
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHH
Q psy10231 404 -SLDDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVC 482 (607)
Q Consensus 404 -~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (607)
....+.-..+..+..+.|.++.+.++||+|||+.+..+.++.++..+.+.... .........+. .-
T Consensus 379 s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~------------~rn~~tvllf~-ar 445 (528)
T KOG0253|consen 379 SVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK------------TRNAYTVLLFT-AR 445 (528)
T ss_pred cchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc------------CcchhHHHHHH-HH
Confidence 11135567788899999999999999999999999998888877776654421 11122222222 23
Q ss_pred HHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 483 ASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 483 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
.+..+.+...++|+.|++|+..|+++.|....+.++|+++.|.+. +........+..+++.+++++.+.+.++--|||
T Consensus 446 afisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 446 AFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred HHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 334445567789999999999999999999999999999999888 444445556788899999999999888877999
Q ss_pred CCCH
Q psy10231 563 GKTL 566 (607)
Q Consensus 563 ~~~~ 566 (607)
+|.+
T Consensus 524 GR~l 527 (528)
T KOG0253|consen 524 GRSL 527 (528)
T ss_pred CCCC
Confidence 8753
No 12
>KOG0255|consensus
Probab=100.00 E-value=1.3e-31 Score=289.16 Aligned_cols=388 Identities=19% Similarity=0.181 Sum_probs=289.2
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
.++.+.....+..+++++|..+|++++|+++||+|||+++++++++..++.+++++++|++.+++.|+++|++.++...
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHH
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh--hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccc
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV--TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGE 212 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l--~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~ 212 (607)
+..+++|++++++|+.+..+ ......|..+++.+++++ +||+.+++..+++++.++
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~--------------------- 249 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLL--------------------- 249 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH---------------------
Confidence 99999999999999999999 666666666666666665 899999999888887766
Q ss_pred hhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhh
Q psy10231 213 FRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAAC 292 (607)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~ 292 (607)
T Consensus 250 -------------------------------------------------------------------------------- 249 (521)
T KOG0255|consen 250 -------------------------------------------------------------------------------- 249 (521)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCch---hhhhHHHHHH-HHHHHhhcCCccchhhhhhccCcc
Q psy10231 293 AVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTA---VADAELKEIQ-QSLKVQMAGSSMDHCAQTFTNSAV 368 (607)
Q Consensus 293 ~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 368 (607)
..++.||||||+..+++.+++.+.+++..+.|+ ..++..++.. ...+.....+....+.++++.++.
T Consensus 250 ---------~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 250 ---------LWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRL 320 (521)
T ss_pred ---------HHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHH
Confidence 455667999999999999999999888876542 1222222221 111111222344668889998876
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHH
Q psy10231 369 WKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALS 448 (607)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~ 448 (607)
++..+.....++. +...+|.-.+. ..+.+.+.+....+.+.....+....+...|+.|||.....+..+..++
T Consensus 321 ~~~~~~~~~~~~~------~~~~y~gl~~~-~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~ 393 (521)
T KOG0255|consen 321 RYRTLYLLFIWFV------FSLVYYGLSLN-VSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIG 393 (521)
T ss_pred HHHHHHHHHHHHH------HhHHHHhhhhh-hhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 7666655555531 22333332222 2244556666666777788888888899999999999999999999998
Q ss_pred HHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcH
Q psy10231 449 MGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYP 528 (607)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~ 528 (607)
++..++.... ...+.......+...+...+... .+.+..|++|+..|..+.+......+++++++|.+..
T Consensus 394 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~ 463 (521)
T KOG0255|consen 394 LLLFGWLPDD---------LGGWLHWILPLLGKFFIGSAFNL-IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPL 463 (521)
T ss_pred HHHHHHhhcc---------chhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888774321 11122333333333333444433 3789999999999999999999999999999988774
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHHHHHHH
Q psy10231 529 DLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLLEIENH 572 (607)
Q Consensus 529 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (607)
.... ......+.+++....+...+..+++|||+++++.+..++
T Consensus 464 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~ 506 (521)
T KOG0255|consen 464 LLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLD 506 (521)
T ss_pred HHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHH
Confidence 3333 222223333567777777777788999999988654433
No 13
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-31 Score=265.72 Aligned_cols=358 Identities=17% Similarity=0.196 Sum_probs=277.0
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...|..+.+...+..++|++.+ |+|+|..+.|++.|.|.++.++++++...+.||+.||++++..+.++.+++++++
T Consensus 20 ~~~F~igttEfv~~gLLp~iA~---dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a 96 (394)
T COG2814 20 LAAFAIGTTEFVPVGLLPPIAA---DLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSA 96 (394)
T ss_pred HHHHHHHhHHHHHHhchHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Confidence 3345666677778899999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHH
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVV 185 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~ 185 (607)
+++||+.++++|++.|+..|..++ ..++..++.|+++|++++++...+..++.++|.++|.++ |||+.|++.+.+
T Consensus 97 lAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l 176 (394)
T COG2814 97 LAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVL 176 (394)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999988888777 999999999999
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
+++..+.
T Consensus 177 ~ll~~~~------------------------------------------------------------------------- 183 (394)
T COG2814 177 ALLALLL------------------------------------------------------------------------- 183 (394)
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 9888773
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
.+..+| |+-. +++
T Consensus 184 ------------------------------------~~~~lP--~~~~--~~~--------------------------- 196 (394)
T COG2814 184 ------------------------------------LWKLLP--PSEI--SGS--------------------------- 196 (394)
T ss_pred ------------------------------------HHHhCC--CccC--CCC---------------------------
Confidence 333344 1000 000
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFFMAI 423 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~ 423 (607)
......+..+.+|+|+.+..+.... ..+.+.+...+|...++++ .|++. ...+....++++.++|+.
T Consensus 197 ------~~~~~~~~~~~l~~p~v~~~l~~t~-----l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~ 265 (394)
T COG2814 197 ------LPGPLRTLLRLLRRPGVLLGLLATF-----LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNL 265 (394)
T ss_pred ------CCcchhHHHHHhcCchHHHHHHHHH-----HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHH
Confidence 0011112345677777665443333 2333466777777777765 46654 357788999999999999
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhh-hhhhccccCc
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLP-WVMIAELFPL 502 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~p~ 502 (607)
++|++.|| +.|+.+.....+.++.++.+.+.. ...+..+..... .++.....+.. ....++.. +
T Consensus 266 ~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-----------~~~~~~~~~~~~--wg~a~~~~~~~~~~~~a~~~-p 330 (394)
T COG2814 266 LGGRLADR-GPRRALIAALLLLALALLALTFTG-----------ASPALALALLFL--WGFAFSPALQGLQTRLARLA-P 330 (394)
T ss_pred HHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-----------chHHHHHHHHHH--HHHHhhhhhhHHHHHhcccC-C
Confidence 99999999 888888877777777776655421 122222333322 33322222222 23444433 4
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 503 SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 503 ~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+.+..+.+++....|+|...|..+.|.+.++.|+....+..+.+.+++.++....
T Consensus 331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 331 DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999988888888888887776554
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=3e-32 Score=278.89 Aligned_cols=346 Identities=11% Similarity=0.020 Sum_probs=237.2
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
..++.+|.+++ |+|+|..+.|++.+++.+++.+++++.|+++||+|||+++..+......+.+....++|+++++++
T Consensus 9 ~~~~~lp~i~~---~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 9 TFSPVLSLVAE---DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHHhhHHHHHH---HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 34678888888 999999999999999999999999999999999999998766655554544333344899999999
Q ss_pred HHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCC
Q psy10231 122 RFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVP 197 (607)
Q Consensus 122 R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~p 197 (607)
|+++|+|.+...+....+.|++|+++|++++++...+..+|..+++.++..+ +||+.|++.++++++..+.
T Consensus 86 R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~----- 160 (368)
T TIGR00903 86 QLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL----- 160 (368)
T ss_pred HHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH-----
Confidence 9999999997544777779999999999999999999999999999998888 9999999988887766552
Q ss_pred CChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHH
Q psy10231 198 ETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 277 (607)
Q Consensus 198 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~ 277 (607)
T Consensus 161 -------------------------------------------------------------------------------- 160 (368)
T TIGR00903 161 -------------------------------------------------------------------------------- 160 (368)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccc
Q psy10231 278 SLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMD 357 (607)
Q Consensus 278 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (607)
..+++||+|++. ++..+.+ +. .+
T Consensus 161 ------------------------~~~~lp~~p~~~---~~~~~~~------------------~~------------~~ 183 (368)
T TIGR00903 161 ------------------------VLAALPALPFQA---AEGFGFK------------------DA------------VK 183 (368)
T ss_pred ------------------------HHHHcCCCCCCC---CCCcchH------------------HH------------HH
Confidence 333455555321 0000000 00 01
Q ss_pred hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhcccCCc--
Q psy10231 358 HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMFSRR-- 435 (607)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr-- 435 (607)
+++++++++..+... +..++.....+.+..|.|.++++.+++........+..+. +.+..+++.||..||
T Consensus 184 ~~~~ll~~~~~~~~~-----~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~~---g~~g~~~~~d~~~r~~~ 255 (368)
T TIGR00903 184 EFGALAGRKDLWIIG-----AILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAILA---GLIGVAVIPDRVARAGL 255 (368)
T ss_pred HHHHHHcChhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH---HHHHHHHhhHHhhhhhh
Confidence 234667776554322 2233344456788899999998777654433333333333 344457777777543
Q ss_pred -hhHHH-hhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHH
Q psy10231 436 -ALATT-SAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVC 513 (607)
Q Consensus 436 -~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~ 513 (607)
+.... .....++....++. . ...+..+....+ ...+.....+..+.+.+|.+|++.|+++.|+.+
T Consensus 256 r~~~~~~~~~~~a~~~~~~~~-----~-------~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~ 322 (368)
T TIGR00903 256 RSIYIRAAALLIAAFFLALAF-----E-------LNRLALFAFIGI-AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIG 322 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----c-------cccHHHHHHHHH-HHHhhhhhHHHHHHHHHHhcchhhcCcccchhh
Confidence 33222 22222222222221 0 112222222222 222233334556688999999999999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 514 SLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 514 ~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
..+++++..+|.+.+.+.. +....|.+++...+++++...
T Consensus 323 ~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 323 FTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987774 566678888887777776654
No 15
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=8.4e-32 Score=286.46 Aligned_cols=375 Identities=13% Similarity=0.046 Sum_probs=251.9
Q ss_pred ccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh-----c
Q psy10231 38 LTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV-----S 112 (607)
Q Consensus 38 ~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~-----a 112 (607)
++....++..|.+.+ |+|++.++.|++.+++.+++++++++.|+++||+|||+++.++.++++++.++.++ +
T Consensus 43 ~~r~~~~~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 119 (467)
T PRK09556 43 LIRKNFKAAQNDMIS---TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGS 119 (467)
T ss_pred HHhcChhhhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhccc
Confidence 355667788899988 99999999999999999999999999999999999999999888888777766665 6
Q ss_pred cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-------hHHHHHHHhHH
Q psy10231 113 KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-------TWQYTSAACAV 184 (607)
Q Consensus 113 ~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-------~Wr~~f~~~~~ 184 (607)
+|++.+++.|+++|++.+...+ ..+++.|++|+++||++++++..+.++|.++++.+...+ +||..|.+.++
T Consensus 120 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 120 VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 8999999999999999999999 999999999999999999999999999999998876543 47887777776
Q ss_pred HHHHHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccc
Q psy10231 185 VALVGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSA 263 (607)
Q Consensus 185 ~~~~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~ 263 (607)
++++..+.. ++++++|+..
T Consensus 200 ~~~~~~i~~~~~~~~~p~~~------------------------------------------------------------ 219 (467)
T PRK09556 200 IALIIGFIGLRYGSDSPEEL------------------------------------------------------------ 219 (467)
T ss_pred HHHHHHHHHHHhCCCChhhc------------------------------------------------------------
Confidence 666554422 2223332210
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHH
Q psy10231 264 FGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEI 343 (607)
Q Consensus 264 ~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 343 (607)
.| + +.++ .. .+.. ..++
T Consensus 220 -----------------------------------------------~~---~-~~~~---~~---~~~~-~~~~----- 236 (467)
T PRK09556 220 -----------------------------------------------GW---G-KAEE---IF---GEPI-SEED----- 236 (467)
T ss_pred -----------------------------------------------CC---C-Chhh---cc---cCcc-chhh-----
Confidence 00 0 0000 00 0000 0000
Q ss_pred HHHHHHhhcCCccchh-hhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHH
Q psy10231 344 QQSLKVQMAGSSMDHC-AQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFF 420 (607)
Q Consensus 344 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~ 420 (607)
+.+++++....+.+ ++.++++..|... +..++.....+....|.|.++++ .|.+.. +........++.++
T Consensus 237 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~i 309 (467)
T PRK09556 237 --KETESTDMTKWQIFVEYVLKNPVIWLLC-----FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALV 309 (467)
T ss_pred --hccccccCcHHHHHHHHHHcChHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 00000000000001 1256666544322 22222333355678899998865 576543 45666677788999
Q ss_pred HHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc
Q psy10231 421 MAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF 500 (607)
Q Consensus 421 ~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 500 (607)
+.++.|+++||++||+..........++...+.. .. ....+......+.++. ...+..........|.+
T Consensus 310 g~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~ 378 (467)
T PRK09556 310 GSLLWGWLSDLANGRRALVACIALALIIFTLGVY---QH-------ATSEYMYLASLFALGF-LVFGPQLLIGVAAVGFV 378 (467)
T ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH---Hh-------cCcHHHHHHHHHHHHH-HHhhHHHHHHHHHHhhc
Confidence 9999999999999988766544333322211111 00 0112222222222221 22222222235667999
Q ss_pred CccchhhHHHHHHHHHHH-HHHHHhhhcHHHHH------------hhhhHHHHHHHHHHHHHHHHHhhh
Q psy10231 501 PLSVRGIMGGIVCSLGYL-FIFTTVKMYPDLMY------------LLNMGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 501 p~~~r~~~~g~~~~~~~~-~~~i~~~i~~~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 556 (607)
|++.||++.|+.+.++++ +.+++|.+.|.+.+ ..+|...|+++.++++++.+..++
T Consensus 379 p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 379 PKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred chhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 77999999999999 577888888887777777665543
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=5.2e-32 Score=282.92 Aligned_cols=374 Identities=13% Similarity=0.109 Sum_probs=254.9
Q ss_pred hhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK 113 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~ 113 (607)
+++.+|....+...|.+++ |+|.+.++.|++.+++.+++++++++.|+++||+|||+++..++++++++++++++++
T Consensus 18 ~~~~~d~~~~~~~~~~l~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 94 (412)
T TIGR02332 18 IFSFLDRINIGFAGLTMGK---DLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT 94 (412)
T ss_pred HHHHhhhhhHHHHHHhhHh---hcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567788888889998888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----------hHHHHHHHh
Q psy10231 114 GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----------TWQYTSAAC 182 (607)
Q Consensus 114 ~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----------~Wr~~f~~~ 182 (607)
|++++++.|+++|++.+...+ ...++.|++|+++|+++++++..+..+|..+++.+++.+ +||+.|++.
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~ 174 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLE 174 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHH
Confidence 999999999999999999999 889999999999999999999999999999999887643 799999998
Q ss_pred HHHHHHHHHH-HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 183 AVVALVGFAA-MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 183 ~~~~~~~~~~-~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
++++++..++ .+++||+|+..
T Consensus 175 ~~~~l~~~~~~~~~~~~~p~~~---------------------------------------------------------- 196 (412)
T TIGR02332 175 GFPSVILGVMTWFWLDDSPDKA---------------------------------------------------------- 196 (412)
T ss_pred HHHHHHHHHHHhhccCCCcccC----------------------------------------------------------
Confidence 8887765442 23345544210
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
+|+.++ +.+...++.++++.+.++.
T Consensus 197 -------------------------------------------------~~l~~~----~~~~~~~~~~~~~~~~~~~-- 221 (412)
T TIGR02332 197 -------------------------------------------------KWLDEE----DKKALKEMIDNDQLTLEQP-- 221 (412)
T ss_pred -------------------------------------------------CCCCHH----HHHHHHHHHHhcccccccc--
Confidence 111110 1000000110000000000
Q ss_pred HHHHHHHHhhcCCc-cchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh--CCCc-chHHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSS-MDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA--GSSL-DDYVASIIVAGL 417 (607)
Q Consensus 342 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~~~ 417 (607)
++.. ++.... ...+++++ ++..+ ...+..++.....+.+..|.|.++++. +.+. ..........+.
T Consensus 222 --~~~~--~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~ 291 (412)
T TIGR02332 222 --EGAF--AHAAMPQRSMLREIF-TPAIM-----LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFC 291 (412)
T ss_pred --cccc--ccccccHHHHHHHhc-ChHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHH
Confidence 0000 000000 01122222 23222 223333444555777889999999874 3332 345667778888
Q ss_pred HHHHHHHHhHhhcccCCchhH-HHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhh
Q psy10231 418 RFFMAIIGSACIQMFSRRALA-TTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMI 496 (607)
Q Consensus 418 ~~~~~~~~g~l~d~~grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (607)
.+++.++.++++||+++|+.. ........++. .+.. .. ............+..+. ....+..+...
T Consensus 292 ~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~----~~-------~~~~~~~~~~~~~~~g~-~~~~~~~~~~~ 358 (412)
T TIGR02332 292 TIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLAS----AT-------DHNLIQLLGIIMASMGS-FSAMAIFWTTP 358 (412)
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHH----hc-------CCHHHHHHHHHHHHHHh-hhhhhHHHhhc
Confidence 999999999999999977653 33332332222 1111 00 11112111122211111 12223344556
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHH
Q psy10231 497 AELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCA 546 (607)
Q Consensus 497 ~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~ 546 (607)
.|.+|++.|+++.|+.+..+++|++++|.+.|.+.+..| |...++..+++
T Consensus 359 ~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 359 DQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred ccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 788999999999999999999999999999999999875 77666655544
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=280.27 Aligned_cols=357 Identities=15% Similarity=0.152 Sum_probs=255.4
Q ss_pred HhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 32 KLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
..+.++++.....+..|.+.+ ++|+++.+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 102 (426)
T PRK12307 26 GYVFDGFDFMLIFYIMYLIKA---DLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL 102 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 334567788888888899888 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVA 186 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~ 186 (607)
+++++.++++|+++|++.+...+ ...++.|++|+++|+++.++...+..+|.++++.+...+ +||+.|++..+..
T Consensus 103 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 103 ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPV 182 (426)
T ss_pred HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999999999999999998887665 8999998754433
Q ss_pred HHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhh
Q psy10231 187 LVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGP 266 (607)
Q Consensus 187 ~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~ 266 (607)
++...
T Consensus 183 ~~~~~--------------------------------------------------------------------------- 187 (426)
T PRK12307 183 LLVIY--------------------------------------------------------------------------- 187 (426)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 32222
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHH
Q psy10231 267 VFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQS 346 (607)
Q Consensus 267 ~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (607)
.....||++++..++.+. .++..+.
T Consensus 188 -----------------------------------~~~~~p~~~~~~~~~~~~------------~~~~~~~-------- 212 (426)
T PRK12307 188 -----------------------------------IRARAPESKEWEEAKLSG------------KGKHSQS-------- 212 (426)
T ss_pred -----------------------------------HHHHCCCChHHHHhhhhc------------ccccccc--------
Confidence 222234544332111000 0000000
Q ss_pred HHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHH
Q psy10231 347 LKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIG 425 (607)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 425 (607)
..+....++++.++++.++..... . ...+..+...+.+..+.|.++++.|.+.. .........++.+++.++.
T Consensus 213 ----~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 286 (426)
T PRK12307 213 ----AWSVFSLSMKGLFNRAQFPLTLCV-F-IVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVW 286 (426)
T ss_pred ----chhhhhHHHHHHHhhchHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011234566776655432221 1 22222233334466788888887776543 3455666778889999999
Q ss_pred hHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHH-HhccchhhhhhhccccCccc
Q psy10231 426 SACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCAS-MLGMLQLPWVMIAELFPLSV 504 (607)
Q Consensus 426 g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~ 504 (607)
+++.||++||+.+..+.....+..+.+... + ..... ......+...+ ..+..+....++.|.+|++.
T Consensus 287 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 354 (426)
T PRK12307 287 GLCADRIGLKKTFSIGLLMSFLFIFPLFRI---P--------QDNYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEV 354 (426)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHH---c--------cccHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH
Confidence 999999999998887766655544333221 0 11111 11222222211 12233444567889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHH
Q psy10231 505 RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGM 539 (607)
Q Consensus 505 r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~ 539 (607)
|+++.|+.+.+.++++.++|.+.+.+.+..|+...
T Consensus 355 ~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 355 RGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 99999999999999999999999999998886543
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.3e-31 Score=276.60 Aligned_cols=362 Identities=17% Similarity=0.180 Sum_probs=260.4
Q ss_pred hhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK 113 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~ 113 (607)
++++++....+...|.+.+ +++.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK11551 25 LLEGLDLQSAGVAAPRMAQ---EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW 101 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc
Confidence 4567777778888999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHH
Q psy10231 114 GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALV 188 (607)
Q Consensus 114 ~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~ 188 (607)
|++.+++.|+++|++.+...+ ..+++.|++|+++|++++++...+..+|..+++.++..+ +||+.|++.++..++
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLL 181 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999999999999999988766 899999987766555
Q ss_pred HHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHH
Q psy10231 189 GFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVF 268 (607)
Q Consensus 189 ~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~ 268 (607)
..+.
T Consensus 182 ~~~~---------------------------------------------------------------------------- 185 (406)
T PRK11551 182 LVPL---------------------------------------------------------------------------- 185 (406)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 4442
Q ss_pred HHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHH
Q psy10231 269 VSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLK 348 (607)
Q Consensus 269 ~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (607)
...++||+|++..++++.++.+..
T Consensus 186 ---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~----------------------- 209 (406)
T PRK11551 186 ---------------------------------LMRWLPESRAFAQAAGAGKQRAPV----------------------- 209 (406)
T ss_pred ---------------------------------HHHhCCCChhHHhccCcchhhhhh-----------------------
Confidence 233345554432111100000000
Q ss_pred HhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhH
Q psy10231 349 VQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSA 427 (607)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~ 427 (607)
..+.+++++.++ . .......+......+....|.|.++++.|.+.. .........++.+++.++.++
T Consensus 210 ----------~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 277 (406)
T PRK11551 210 ----------LRALFGEGRATA-T-LLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGA 277 (406)
T ss_pred ----------HHHHhhhhhhhH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 000111111111 1 111112222233355667788999887777543 566677778889999999999
Q ss_pred hhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhh
Q psy10231 428 CIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGI 507 (607)
Q Consensus 428 l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 507 (607)
+.||++||+.+..+.....++.+.+... ...+....... +......+..+..+++..|.+|++.|++
T Consensus 278 l~dr~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 344 (406)
T PRK11551 278 LMDRLRPRRVVLLIYAGILASLAALAAA------------PSFAGMLLAGF-AAGLFVVGGQSVLYALAPLFYPTQVRGT 344 (406)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhc------------CcHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHcchhhhhh
Confidence 9999999998877655555554443321 11222222222 2222223345666688899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHHhhhhH-HHHHHHHHHHHHHHHHhh
Q psy10231 508 MGGIVCSLGYLFIFTTVKMYPDLMYLLNMG-GMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 508 ~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~ 555 (607)
+.|+.+.+.+++..++|.+.|.+.+..+.. ..++......+++.++.+
T Consensus 345 ~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 345 GVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998875443 344444444444444433
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-32 Score=262.31 Aligned_cols=372 Identities=15% Similarity=0.111 Sum_probs=272.7
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
..+...|.+.+ |.++|.+|+|++.+.+.+++.++-++.|.++||.+.|+.+..++++.++.+++++++++.+.+.+.
T Consensus 47 nF~~a~p~l~e---~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l 123 (448)
T COG2271 47 NFNLAMPALIE---DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVL 123 (448)
T ss_pred hHhhccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 45788899999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHh--hhh----hHHHHHHHhHHHHHHHHHHHh
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLG--YIV----TWQYTSAACAVVALVGFAAMH 194 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~--~~l----~Wr~~f~~~~~~~~~~~~~~~ 194 (607)
-+++|...|.-.| +...++.|+++++||+..++++.+-++|..+.+++. +.+ +||..|++.++++++..+.
T Consensus 124 ~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~-- 201 (448)
T COG2271 124 WVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALI-- 201 (448)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH--
Confidence 9999999999999 999999999999999999999999999999998888 555 8999999999998877663
Q ss_pred cCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHH
Q psy10231 195 AVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVL 274 (607)
Q Consensus 195 ~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~ 274 (607)
T Consensus 202 -------------------------------------------------------------------------------- 201 (448)
T COG2271 202 -------------------------------------------------------------------------------- 201 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhc--
Q psy10231 275 IVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMA-- 352 (607)
Q Consensus 275 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 352 (607)
..+..+|+|+- .+ ..+..+.+++.. +.+ +++++++
T Consensus 202 ---------------------------~~~~~rd~Pqs---~G-----LP~ie~~~~d~~-------e~~-~~~~~~~~l 238 (448)
T COG2271 202 ---------------------------LLFLLRDRPQS---EG-----LPPIEEYRGDPL-------EIY-EEEKENEGL 238 (448)
T ss_pred ---------------------------HHHHhCCCccc---cC-----CCCHHHhhcCch-------hhh-hhhccCCCc
Confidence 23333333321 00 000000000000 000 0000000
Q ss_pred CCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCc-chHHHHHHHHHHHHHHHHHHhHhhc
Q psy10231 353 GSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSL-DDYVASIIVAGLRFFMAIIGSACIQ 430 (607)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d 430 (607)
...+.-.+.+++||..|...+.... ....=+.+..|.|.|+.+. |++. ++.....++-.++++|++++|+++|
T Consensus 239 s~~~i~~~YVL~Nk~iW~la~a~vf-----vYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSD 313 (448)
T COG2271 239 TAWQIFVKYVLKNKLIWLLALANVF-----VYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSD 313 (448)
T ss_pred cHHHHHHHHHHcChHHHHHHHHHHH-----HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 0011233445667655543322222 2223578899999999764 6665 4677888899999999999999999
Q ss_pred cc--CCchhHHHhh-HHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhh
Q psy10231 431 MF--SRRALATTSA-FFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGI 507 (607)
Q Consensus 431 ~~--grr~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 507 (607)
|+ |||....+.+ +...++.+.+-. .+ +.++......+...+++..+..-+.-..+.|..|++..|+
T Consensus 314 klfkgrR~p~~~i~~~~i~~~~~~~w~----------~~-~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGt 382 (448)
T COG2271 314 KLFKGRRGPMALIFMLLITASLVLYWL----------AP-NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGT 382 (448)
T ss_pred HhcccccchHHHHHHHHHHHHHHHHHc----------CC-CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccc
Confidence 95 5665544332 222222222211 11 2233444444444444455555555578899999999999
Q ss_pred HHHHHHHHHHH-HHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 508 MGGIVCSLGYL-FIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 508 ~~g~~~~~~~~-~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+.|+...++++ |...+....|.+.|..||...|.++.+.++++.++....
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999 888888999999899999999998888888877765544
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-31 Score=282.75 Aligned_cols=379 Identities=16% Similarity=0.132 Sum_probs=256.2
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchh
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFT 116 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~ 116 (607)
.++....+..+|.+.+ ++|.+..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|++
T Consensus 36 ~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 112 (434)
T PRK11663 36 YFTRKSFNAAMPEMLA---DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLW 112 (434)
T ss_pred HHhhhhHHHhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHH
Confidence 3444455778888888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.+++.|++.|++.|...+ ..+++.|++++++|++++++.+.+.++|..+++.+++.+ +||+.|++.+++.++..+
T Consensus 113 ~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 113 AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999888776 999999988877665543
Q ss_pred H-HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 192 A-MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 192 ~-~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
. .+++||+|++...
T Consensus 193 ~~~~~~~~~p~~~~~----------------------------------------------------------------- 207 (434)
T PRK11663 193 FLCWRLRDKPQAMGL----------------------------------------------------------------- 207 (434)
T ss_pred HHHHHcCCCHhhcCC-----------------------------------------------------------------
Confidence 2 2334444322100
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHh
Q psy10231 271 LGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQ 350 (607)
Q Consensus 271 ~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (607)
|+..+| +. +..+. + .+.+
T Consensus 208 ------------------------------------~~~~~~-----~~-~~~~~-----------~---------~~~~ 225 (434)
T PRK11663 208 ------------------------------------PSVGEW-----RH-DALEL-----------A---------QQQE 225 (434)
T ss_pred ------------------------------------CCcccc-----cc-ccccc-----------c---------hhcc
Confidence 000000 00 00000 0 0000
Q ss_pred hcCCccch-h-hhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHh
Q psy10231 351 MAGSSMDH-C-AQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGS 426 (607)
Q Consensus 351 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g 426 (607)
+...+... + ...++++..+.. .+..+......+.+..|.|.++++ .|.+.. .........++..++.++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g 300 (434)
T PRK11663 226 GAGLSRKEILTKYVLLNPYIWLL-----SFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAG 300 (434)
T ss_pred ccCCChhhhHHHHHhcChHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000001 1 113444433321 121222223345667788998854 466543 45667777888999999999
Q ss_pred Hhhccc--CCchhH-HHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 427 ACIQMF--SRRALA-TTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 427 ~l~d~~--grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
+++||+ ++|+.. ........+....+... +. ............. +.+..+..........|.+|++
T Consensus 301 ~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 369 (434)
T PRK11663 301 WGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM---PF-------ASYVMQAACFFTI-GFFVFGPQMLIGMAAAECSHKE 369 (434)
T ss_pred hhHHHhccCCccHHHHHHHHHHHHHHHHHHHc---cc-------ccHHHHHHHHHHH-HHHHhhHHHHHHHHHHhcccHh
Confidence 999998 333332 22111111121111110 00 1111111111111 1122222222335678999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 504 VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 504 ~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.|+++.|+.+++.++|..++|.+.|.+.+..|+...|...+++++++++..+...++.
T Consensus 370 ~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 370 AAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred hHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999988888888777665544433
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.2e-30 Score=274.91 Aligned_cols=361 Identities=15% Similarity=0.193 Sum_probs=231.9
Q ss_pred hhhccccccccccccccccCCCcccc---cCccchhHHH---HHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIIS---ISSDDASWIA---SLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGW 106 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~---~s~~~~~~i~---s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~ 106 (607)
.+++.+|....+...|.+.+ +++ .+..+.+.+. +..+++..++++++|+++||+|||+++..+.+++++++
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAH---IFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 35678898888899999988 663 4555444444 44555566999999999999999999999999999999
Q ss_pred HHHHhccchh--------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhh-----
Q psy10231 107 TIITVSKGFT--------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYI----- 172 (607)
Q Consensus 107 ~~~a~a~~~~--------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~----- 172 (607)
+++++++|+. .++++|+++|++.|+.++ ..+++.|++|+++|+++.++...+...|.++++.+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 187 (432)
T PRK10406 108 LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL 187 (432)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999875 589999999999999999 99999999999999999999888888887777654322
Q ss_pred -------hhHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhH
Q psy10231 173 -------VTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSAC 245 (607)
Q Consensus 173 -------l~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 245 (607)
.|||+.|++.++++
T Consensus 188 ~~~~~~~~gWr~~F~i~~~~~----------------------------------------------------------- 208 (432)
T PRK10406 188 EDAELREWGWRIPFALGAVLA----------------------------------------------------------- 208 (432)
T ss_pred CHHHHhccchHHHHHHHHHHH-----------------------------------------------------------
Confidence 14555555544444
Q ss_pred HHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHH
Q psy10231 246 YVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNS 325 (607)
Q Consensus 246 ~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~ 325 (607)
++.++....+||+|++..++ +
T Consensus 209 ---------------------------------------------------ll~~~~~~~~~e~~~~~~~~------~-- 229 (432)
T PRK10406 209 ---------------------------------------------------VVALWLRRQLDETSQQETRA------L-- 229 (432)
T ss_pred ---------------------------------------------------HHHHHHHhcCCCCchHHHhh------h--
Confidence 33333555677775431100 0
Q ss_pred HHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCC
Q psy10231 326 LVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSS 404 (607)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 404 (607)
++..++++++++++.+. ......+......+.+..|.|.++++ .|.+
T Consensus 230 ----------------------------~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s 277 (432)
T PRK10406 230 ----------------------------KEAGSLKGLWRNRRAFI----MVLGFTAAGSLCFYTFTTYMQKYLVNTAGMH 277 (432)
T ss_pred ----------------------------cccccHHHHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 00112445555443222 11111222233456778899998865 4665
Q ss_pred cc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHH
Q psy10231 405 LD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCA 483 (607)
Q Consensus 405 ~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (607)
.. ......+..+...++.++.|+++||++||+.+.....+..+....+.. .... .......+....+....
T Consensus 278 ~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 278 ANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILS--ALQN------VSSPYAAFGLVMCALLI 349 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH--HHHc------CCcHHHHHHHHHHHHHH
Confidence 43 344555556667788888999999999998776655443332221111 0110 01112211111111111
Q ss_pred HHhccchhhhhhhccccCccchhhHHHHHHHHHHHH-HHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhh
Q psy10231 484 SMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLF-IFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 484 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~-~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 556 (607)
... ..+..+.+.+|.+|++.|+++.|+.+.++++. +...|.+.+ +.+..| +...+++.++..+++.+..++
T Consensus 350 ~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 350 VSF-YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 111 22345578899999999999999999988763 444666666 445555 333445555555555544443
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.6e-30 Score=270.48 Aligned_cols=347 Identities=12% Similarity=0.135 Sum_probs=253.3
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
...+.+|.+.+ |+|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++++++++++|++.++++
T Consensus 27 ~~~~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (390)
T PRK03545 27 VPVGLLSDIAQ---SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLIS 103 (390)
T ss_pred HHHcchHHHHh---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 34456788888 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcC
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAV 196 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~ 196 (607)
|+++|++.+...+ ..+++.|++|+++|++++++...+.++|..+++.+++.+ +||+.|++.+++.++..+.
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~---- 179 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLL---- 179 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999 999999999999999999999999999999999988766 9999999988877665442
Q ss_pred CCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHH
Q psy10231 197 PETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 276 (607)
Q Consensus 197 pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~ 276 (607)
T Consensus 180 -------------------------------------------------------------------------------- 179 (390)
T PRK03545 180 -------------------------------------------------------------------------------- 179 (390)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCcc
Q psy10231 277 YSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSM 356 (607)
Q Consensus 277 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (607)
....+||.|+ ++ ++. .
T Consensus 180 -------------------------~~~~~~~~~~-----~~-~~~---------------------------------~ 195 (390)
T PRK03545 180 -------------------------LIKLLPLLPS-----EH-SGS---------------------------------L 195 (390)
T ss_pred -------------------------HHHhCCCCCC-----CC-cch---------------------------------H
Confidence 2223344321 00 000 0
Q ss_pred chhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCC
Q psy10231 357 DHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSR 434 (607)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~gr 434 (607)
++.++.++++..+........... ..+....+.+.++++ .|.+.+ ........++.++++.++.+++.||++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~ 270 (390)
T PRK03545 196 KSLPLLFRRPALVSLYLLTVVVVT-----AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPS 270 (390)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 112345666654432222221111 123334566666654 466544 4556677788899999999999999998
Q ss_pred chhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHH
Q psy10231 435 RALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCS 514 (607)
Q Consensus 435 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~ 514 (607)
|.... +.....++...+... . ...+.......+.+.. .....+.......|..| +.|+++.|+.+.
T Consensus 271 ~~~~~-~~~~~~~~~~~l~~~--~---------~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 336 (390)
T PRK03545 271 GFLLI-AIALLLVCLLLLLPA--A---------NSEWHLSVLSIFWGIA-IMCIGLAMQVKVLKLAP-DATDVAMALFSG 336 (390)
T ss_pred hHHHH-HHHHHHHHHHHHHHH--h---------chHHHHHHHHHHHHHH-HhcchHHHHHHHHHhCC-CcHHHHHHHHHH
Confidence 76543 333333333222110 0 1122222233332222 22233444466677776 578999999999
Q ss_pred HHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy10231 515 LGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFL 558 (607)
Q Consensus 515 ~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 558 (607)
..++|..+++.+.|.+.+..|+...++..+.+.+++.++.....
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988888888777766553
No 23
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.3e-30 Score=272.80 Aligned_cols=373 Identities=19% Similarity=0.207 Sum_probs=243.9
Q ss_pred Hhhhcccccccccccccc-ccCCCccc--ccCccchhHHH-----HHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHH
Q psy10231 32 KLHCNNLTHAIPSILIPQ-LQKPSSII--SISSDDASWIA-----SLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFI 103 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~-l~~~~~~~--~~s~~~~~~i~-----s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~ 103 (607)
..+++.+|....+.+.|. +.+ ++ +.++. .+++. ++.+++..+++++.|+++||+|||++++.+.++++
T Consensus 30 ~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~ 105 (438)
T PRK09952 30 GAVVDWYDFLLYGITAALVFNR---EFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMG 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---hcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 446678888888777664 343 33 45554 46554 35567788999999999999999999999999999
Q ss_pred HHHHHHHhccchh--------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhh--
Q psy10231 104 IGWTIITVSKGFT--------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYI-- 172 (607)
Q Consensus 104 ~~~~~~a~a~~~~--------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~-- 172 (607)
++++++++++|+. .++++|+++|++.|+.++ ...++.|++|+++|++..+....+..+|.+++..+...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 106 IATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 588999999999999999 99999999999999999999999999998887655432
Q ss_pred ----------hhHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchh
Q psy10231 173 ----------VTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMS 242 (607)
Q Consensus 173 ----------l~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 242 (607)
.+||+.|++.+++.+
T Consensus 186 ~~~~~~~~~~~gWr~~f~~~~~~~l------------------------------------------------------- 210 (438)
T PRK09952 186 MMTTDEQFLSWGWRIPFLFSIVLVL------------------------------------------------------- 210 (438)
T ss_pred HhCCHHHhhccChHHHHHHHHHHHH-------------------------------------------------------
Confidence 256666655544433
Q ss_pred hhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHH
Q psy10231 243 SACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEA 322 (607)
Q Consensus 243 ~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~ 322 (607)
+.+......||+|+|..++++.++.
T Consensus 211 -------------------------------------------------------~~~~l~~~~~es~~~~~~~~~~~~~ 235 (438)
T PRK09952 211 -------------------------------------------------------IALWVRNGMEESAEFEQQQHEQAAA 235 (438)
T ss_pred -------------------------------------------------------HHHHHHHhCCCChhHHHHHhhcccc
Confidence 3233455677777654332111000
Q ss_pred HHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-h
Q psy10231 323 RNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-A 401 (607)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 401 (607)
+ ......+..+++++.+.... ...+......+....|.|.++++ .
T Consensus 236 ~------------------------------~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~y~~~~~ 281 (438)
T PRK09952 236 K------------------------------KRIPVIEALLRHPGAFLKII----ALRLCELLTMYIVTAFALNYSTQNL 281 (438)
T ss_pred c------------------------------ccCCHHHHHHHchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 00001112333443332111 11222333456677788888754 4
Q ss_pred CCCcch-HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHH
Q psy10231 402 GSSLDD-YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILAN 480 (607)
Q Consensus 402 g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (607)
|.+... .....+.+...+++.++.|+++||+|||+.+..+.+...++.+.+... ... ....+..+......
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~l~ 353 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMA--LEA------QSIFWIVFFSIMLA 353 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHc------CChHHHHHHHHHHH
Confidence 554432 234445566778888999999999999998877665544433222111 000 01112222222222
Q ss_pred HHHHHhccchhhhhhhccccCccchhhHHHHHHHHHH-HHHHHHhhhcHHHHHhh--hhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 481 VCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGY-LFIFTTVKMYPDLMYLL--NMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 481 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-~~~~i~~~i~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
....+ ...+..+++..|.+|++.|+++.|+.+..+. +++.++|.+.+.+.+.. +|...+.+.+++++++.+..+ .
T Consensus 354 ~~~~~-~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~ 431 (438)
T PRK09952 354 NIAHD-MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-L 431 (438)
T ss_pred HHHHH-HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-H
Confidence 22222 2234556889999999999999999877765 88999999999998854 355666666666666665544 4
Q ss_pred ccCCC
Q psy10231 558 LPETQ 562 (607)
Q Consensus 558 ~~~~~ 562 (607)
.+|++
T Consensus 432 ~~~~~ 436 (438)
T PRK09952 432 MKDNQ 436 (438)
T ss_pred ccccc
Confidence 46544
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.98 E-value=2.2e-30 Score=271.12 Aligned_cols=370 Identities=14% Similarity=0.121 Sum_probs=252.1
Q ss_pred HhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 32 KLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
..+.++++....++..|.+.+ ++|.++.+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 96 (405)
T TIGR00891 20 GWLLDAFDFFLVALVLAEVAG---EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF 96 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 335677788888899999988 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----h--HHHHHHHhHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----T--WQYTSAACAV 184 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~--Wr~~f~~~~~ 184 (607)
++|++.+++.|+++|++.+...+ ..+++.|++|+++|+++.++...+..+|..+++.++..+ + ||+.|++.++
T Consensus 97 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~ 176 (405)
T TIGR00891 97 APGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISIL 176 (405)
T ss_pred hccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999999999999999999888766 4 9998887665
Q ss_pred HHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 185 VALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 185 ~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
+.++..+....
T Consensus 177 ~~~~~~~~~~~--------------------------------------------------------------------- 187 (405)
T TIGR00891 177 PIIFALWLRKN--------------------------------------------------------------------- 187 (405)
T ss_pred HHHHHHHHHHh---------------------------------------------------------------------
Confidence 55554442233
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
+||++++...+++.++.++..++..+.++..+...++.
T Consensus 188 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 225 (405)
T TIGR00891 188 -----------------------------------------IPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTL- 225 (405)
T ss_pred -----------------------------------------CCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhh-
Confidence 34443332211111111111111111000000000000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~ 422 (607)
....++ +.++.+...........+ ..........+.|.++.+ .|.+.. .........++.+++.
T Consensus 226 -----------~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~ 291 (405)
T TIGR00891 226 -----------AAAMVQ--SAGKRWPTFVYLVVLVLF-ANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG 291 (405)
T ss_pred -----------hHHhhh--hhhhhhHHHHHHHHHHHH-HHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 000000 011112212211212111 112233455566777753 466543 4556677788899999
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
++.+++.||++||+.+..+.....+....+.. . ....+...... .+......+..+....++.|.+|+
T Consensus 292 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
T TIGR00891 292 CVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA---I--------GANVAVLGLGL-FFQQMLVQGIWGILPKHLGEYFPT 359 (405)
T ss_pred HHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH---h--------CCchHHHHHHH-HHHHHHHccchhhHHHHHhhhCCc
Confidence 99999999999999887766554332222111 0 01222222221 222233333445566788999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHH
Q psy10231 503 SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMW 541 (607)
Q Consensus 503 ~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~ 541 (607)
+.|+++.|+.+.+.+++..++|.+.|.+.+..| +...+.
T Consensus 360 ~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~ 399 (405)
T TIGR00891 360 DQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALA 399 (405)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Confidence 999999999999999999999999999999988 654433
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=1.4e-29 Score=271.03 Aligned_cols=390 Identities=13% Similarity=0.032 Sum_probs=265.6
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...++..+|.++.+..+|.+.+ |+|.+.++.+|+.+.|.++..++.+++|+++||+|||++++.+.+++.+++++++
T Consensus 13 ~~~~~~~ld~tiv~~a~p~i~~---~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~ 89 (495)
T PRK14995 13 LVYIPVAIDATVLHVAAPTLSM---TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA 89 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 4456678888899999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhcc-CCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHH
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEIC-LPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAV 184 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~ 184 (607)
+++|++.++++|+++|+|.+...+ ....+.+.+ |+++|+++++++.....+|..+||.+++.+ +|||.|++..+
T Consensus 90 ~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~ 169 (495)
T PRK14995 90 FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVP 169 (495)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHH
Confidence 999999999999999999999999 888887765 678999999999999999999999999888 99999999988
Q ss_pred HHHHHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccc
Q psy10231 185 VALVGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSA 263 (607)
Q Consensus 185 ~~~~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~ 263 (607)
+.++..++. +++||.++. +.++.|...
T Consensus 170 ~~~~~~~l~~~~l~~~~~~---~~~~~d~~g------------------------------------------------- 197 (495)
T PRK14995 170 IVLVVMGLTARYVPRQAGR---RDQPLNLGH------------------------------------------------- 197 (495)
T ss_pred HHHHHHHHHHHhCCCCCCC---CCCCCChHh-------------------------------------------------
Confidence 877765544 557776421 011100000
Q ss_pred hhhHHHHHHHHHHHHHH-HHHhhHHHHhhh-HHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 264 FGPVFVSLGVLIVYSLG-YIVTWQYTSAAC-AVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 264 ~~~~~~~~g~~~~~~~~-~~~~Wr~~~~~~-~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
.......+......... ....|....... .+.+.+. +..+...|.
T Consensus 198 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~f~~~e~-------------------------------- 244 (495)
T PRK14995 198 ALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL-LGLFIRTQL-------------------------------- 244 (495)
T ss_pred HHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH-HHHHHHHHh--------------------------------
Confidence 00000000000000000 001112111111 1111111 111111110
Q ss_pred HHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCc-chHHHHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSL-DDYVASIIVAGLRF 419 (607)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~ 419 (607)
..+...-..++++++.........+ ......+....+.|.++++. |.+. +.+.......+...
T Consensus 245 ----------~~~~p~~~~~lf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~ 309 (495)
T PRK14995 245 ----------AASRPMIDMRLFTHRIILSGVVMAM-----TAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASG 309 (495)
T ss_pred ----------cCCCCCcCHHHhCCcccHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 0001111234666665443222222 22223456677888888764 6654 45677777888899
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++.++.|++.||+|+|+.+..+..+..++...+.... .....+.......+.+.+.+.. .+.....+.+.
T Consensus 310 ~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~l~G~g~g~~-~~~~~~~~~~~ 379 (495)
T PRK14995 310 FSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD---------FSTQQWQAWGLMALLGFSAASA-LLASTSAIMAA 379 (495)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc---------CCCchHHHHHHHHHHHHhHHHH-HHHHHHHHHhc
Confidence 9999999999999999988877777766665544311 1122233333333333333332 33344667788
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 500 FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
.|++.++.+.++.++..++|+.+++.+.+.+.++
T Consensus 380 ~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 380 APPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred CCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888653
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=6.1e-30 Score=265.89 Aligned_cols=354 Identities=12% Similarity=0.061 Sum_probs=256.0
Q ss_pred cccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHH
Q psy10231 41 AIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCV 120 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~ 120 (607)
...++.+|.+++ |+++|..+.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.+++
T Consensus 26 ~~~~~~lp~i~~---~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~ 102 (393)
T PRK09705 26 TSVGPLLPQLRQ---ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLS 102 (393)
T ss_pred hccchhHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHH
Confidence 456788899988 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHHHh
Q psy10231 121 GRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAAMH 194 (607)
Q Consensus 121 ~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~ 194 (607)
+|+++|+|.+...+ ...++.|+++ ++|+++++.+..+..+|..+++.++..+ +||+.+.+.++..++..+.
T Consensus 103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~-- 179 (393)
T PRK09705 103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFA-- 179 (393)
T ss_pred HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH--
Confidence 99999999999999 9999999986 8899999999988888888888777664 7998877655544333221
Q ss_pred cCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHH
Q psy10231 195 AVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVL 274 (607)
Q Consensus 195 ~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~ 274 (607)
T Consensus 180 -------------------------------------------------------------------------------- 179 (393)
T PRK09705 180 -------------------------------------------------------------------------------- 179 (393)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCC
Q psy10231 275 IVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGS 354 (607)
Q Consensus 275 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (607)
..+..++.|+ .++ +.
T Consensus 180 ---------------------------~~~~~~~~~~-------~~~------------------------------~~- 194 (393)
T PRK09705 180 ---------------------------WWWQSAREVA-------SSH------------------------------KT- 194 (393)
T ss_pred ---------------------------HHHHhcCCCc-------ccc------------------------------CC-
Confidence 0000011110 000 00
Q ss_pred ccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccC
Q psy10231 355 SMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFS 433 (607)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g 433 (607)
....++.+++++.+... +..+....+++....|.|.++++.|.+.. .+....+.+++.+++.++.+++.||++
T Consensus 195 -~~~~~~~l~~~~~~~l~-----~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~ 268 (393)
T PRK09705 195 -TTTPVRVVFTPRAWTLG-----VYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQD 268 (393)
T ss_pred -CcCCcccccCHhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 00112233444333211 11222233456778889999887777544 566777888999999999999999999
Q ss_pred CchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc-CccchhhHHHHH
Q psy10231 434 RRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF-PLSVRGIMGGIV 512 (607)
Q Consensus 434 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~ 512 (607)
||+....+..+..++..++... + ....... ..+.+.+.+ ...+.......+.+ |++.++++.|+.
T Consensus 269 ~~~~~~~~~~l~~~~~~~~~~~---~--------~~~~~~~--~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~ 334 (393)
T PRK09705 269 RRKLLMLALVLQLVGFCGFIWL---P--------LQLPVLW--AMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFM 334 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHc---c--------chHHHHH--HHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 9998888776666655443321 1 1111111 112222222 22344445555666 467899999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q psy10231 513 CSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFLPETQGKT 565 (607)
Q Consensus 513 ~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (607)
+.+++++..++|.+.|++.|..| +...|.+.++.+++..+....+.||++.+.
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 99999999999999999999886 566677777777777777677888887654
No 27
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7.9e-30 Score=274.27 Aligned_cols=408 Identities=14% Similarity=0.103 Sum_probs=266.9
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...++++++....++.+|.+.+ ++|.++.+.+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 27 LGYLLDGFDFVLITLVLTEVQG---EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3445667788888888899988 9999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHH
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVV 185 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~ 185 (607)
+++|++.+++.|++.|++.+...+ ...++.|.+++++|+++.++...+..+|..+++.+++.+ +||+.|++..+.
T Consensus 104 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 104 FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999988877 899999986655
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
.++.++....+||++++..+++++++..+..+. ...+++.. .
T Consensus 184 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~----~ 225 (496)
T PRK03893 184 IIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDI----------------------------------LYRGEHRI----I 225 (496)
T ss_pred HHHHHHHHHhCCCchhhhhhccccccchhHHHH----------------------------------HhcchhHH----H
Confidence 555444446678887654433222111000000 00000000 0
Q ss_pred hHHHHHHHHHH--HHHHHHHhhHHHH-hhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHH
Q psy10231 266 PVFVSLGVLIV--YSLGYIVTWQYTS-AACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKE 342 (607)
Q Consensus 266 ~~~~~~g~~~~--~~~~~~~~Wr~~~-~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 342 (607)
........... ..... ..|+... ....+...... ..+. .+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~-~~~--------------------------------- 269 (496)
T PRK03893 226 NILLTLAAAAALWFCFAG-NLQNAAIVAVLGLLCAAIF-ISFM-VQS--------------------------------- 269 (496)
T ss_pred HHHHHHHHHHHHHHHHHh-hhcchhHHHHHHHHHHHHH-HHHH-HHh---------------------------------
Confidence 00000000000 00000 0001000 00000000000 0000 000
Q ss_pred HHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHH
Q psy10231 343 IQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFF 420 (607)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~ 420 (607)
++. ++..........+..+...+....+.|.+++ +.|.+.. .........++.++
T Consensus 270 ----------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~ 326 (496)
T PRK03893 270 ----------------------SGK-RWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAV 326 (496)
T ss_pred ----------------------ccc-chhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 000 0011111212222211222345678888885 5566543 56677778888999
Q ss_pred HHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc
Q psy10231 421 MAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF 500 (607)
Q Consensus 421 ~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 500 (607)
+.++.+++.||++||+.+..+..+..+..+.+... . .................+.+..+....++.|.+
T Consensus 327 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (496)
T PRK03893 327 GCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI----------G-GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF 395 (496)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc----------c-ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC
Confidence 99999999999999998877665554443322210 0 111122222222222223333445557888999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHH
Q psy10231 501 PLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLL 549 (607)
Q Consensus 501 p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~ 549 (607)
|++.|++++|+.+....+++.++|.+.|.+.+..|+...+...++.+.+
T Consensus 396 ~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 396 DTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988777665544433
No 28
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=1.6e-29 Score=266.39 Aligned_cols=347 Identities=18% Similarity=0.254 Sum_probs=229.5
Q ss_pred HHHhhhccccccccccccccccCCCcccccCccchhHHH-HHH-----HHHhhHhhhHHHHhhhhhcCchhhhhhhhHHH
Q psy10231 30 IGKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIA-SLG-----VISTPVGSLFAGIFMDLLGRKTTVQLTAIPFI 103 (607)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~-s~~-----~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~ 103 (607)
....+++.+|....+...|.+.+ |++.++.+.+.+. +.. .++..+++++.|+++||+|||++++.+.+++.
T Consensus 21 ~~~~~~~~~d~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~ 97 (434)
T PRK15075 21 TSGNFLEMFDFFLFGFYATAIAK---TFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHH
Confidence 44557788899999999999999 9999888875543 322 23335789999999999999999999999999
Q ss_pred HHHHHHHhccchh--------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-
Q psy10231 104 IGWTIITVSKGFT--------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV- 173 (607)
Q Consensus 104 ~~~~~~a~a~~~~--------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l- 173 (607)
++++++++++|++ .++++|+++|++.+...+ ...++.|++|+++|++++++...+.++|..+++.++..+
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 98 SGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 468999999999999999 999999999999999999999888888777776665542
Q ss_pred -----------hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchh
Q psy10231 174 -----------TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMS 242 (607)
Q Consensus 174 -----------~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 242 (607)
+||+.|++..+...
T Consensus 178 ~~~~~~~~~~~gWr~~f~~~~~~~~------------------------------------------------------- 202 (434)
T PRK15075 178 QWLSPAQMAEWGWRIPFLIGCLIVP------------------------------------------------------- 202 (434)
T ss_pred HhCCHHHHhccchHHHHHHHHHHHH-------------------------------------------------------
Confidence 66766665433221
Q ss_pred hhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHH
Q psy10231 243 SACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEA 322 (607)
Q Consensus 243 ~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~ 322 (607)
+.++.....||++++..++++
T Consensus 203 -------------------------------------------------------~~~~~~~~~~e~~~~~~~~~~---- 223 (434)
T PRK15075 203 -------------------------------------------------------FIFLIRRSLEETEEFLARKHR---- 223 (434)
T ss_pred -------------------------------------------------------HHHHHHHhcCCCHHHHHhhhc----
Confidence 111122334443322110000
Q ss_pred HHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-h
Q psy10231 323 RNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-A 401 (607)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 401 (607)
.+....+++..++ ++.....+ ...+......+....|.|.++++ .
T Consensus 224 ------------------------------~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~ 269 (434)
T PRK15075 224 ------------------------------PSMREIFRSLAAN---WRIVLAGM-LMVAMTTVSFYLITVYTPTFGKTVL 269 (434)
T ss_pred ------------------------------cccccHHHHHHHh---HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000001111111 22222222 22222344567788899999976 4
Q ss_pred CCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHH
Q psy10231 402 GSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILAN 480 (607)
Q Consensus 402 g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (607)
|.+.. ......+..+.++++.++.|+++||+|||+.+..+.....+........ ... ..............
T Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~ 341 (434)
T PRK15075 270 HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW--LVA------APSFARMLAVELWL 341 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HHc------CCchHHHHHHHHHH
Confidence 77544 4555667778889999999999999999998776544433221111000 000 01111111111112
Q ss_pred HHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHH-HHHHHhhhcHHHHHhhhh
Q psy10231 481 VCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYL-FIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 481 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-~~~i~~~i~~~l~~~~g~ 536 (607)
....+ ...+..+.+..|.+|++.|+++.|+.+.++.. ++.++|.+.+.+.+..|+
T Consensus 342 ~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 342 SFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 22222 22344457789999999999999998776665 588899999999998875
No 29
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=8.3e-30 Score=265.46 Aligned_cols=379 Identities=16% Similarity=0.170 Sum_probs=264.5
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchh
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFT 116 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~ 116 (607)
.++....+...|.+.+ ++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++++|++
T Consensus 7 ~~~~~~~~~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 7 YLDRANLSFAAPMLQE---DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred HHHHHhhhHhHHHHHH---hhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHH
Confidence 3566667788888888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.++++|+++|++.+...+ ...++.|++|+++|++.+++...+..+|..+++.+++.+ +||+.|++.+++.++..+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999998876 899999998887776655
Q ss_pred HH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 192 AM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 192 ~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
.. +..||+|+.
T Consensus 164 ~~~~~~~~~~~~-------------------------------------------------------------------- 175 (399)
T TIGR00893 164 LWLKFIPDPPQK-------------------------------------------------------------------- 175 (399)
T ss_pred HhhheecCCCCc--------------------------------------------------------------------
Confidence 32 223333211
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHH-HHHHHhcCchhhhhHHHHHHHHHHH
Q psy10231 271 LGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARN-SLVWFRRSTAVADAELKEIQQSLKV 349 (607)
Q Consensus 271 ~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (607)
+++ ..++.++ ..++... +..++
T Consensus 176 ---------------------------------------~~~-----~~~~~~~~~~~~~~~-------------~~~~~ 198 (399)
T TIGR00893 176 ---------------------------------------AKW-----LTEEEKYIVVGGLLA-------------EQQGK 198 (399)
T ss_pred ---------------------------------------ccc-----CCHHHHhhcchhhcc-------------ccccc
Confidence 000 0000000 0000000 00001
Q ss_pred hhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHHHHHHHhH
Q psy10231 350 QMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFFMAIIGSA 427 (607)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~g~ 427 (607)
++.+....+.++.+++++.+... +..+...........+.|.++++ .+.+. +.........+..+++.++.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (399)
T TIGR00893 199 GPSTPKKYQIKELLKDRRVWGLA-----LGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGR 273 (399)
T ss_pred cccCCCccchHHHhcCHHHHHHH-----HHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 11122334556667666544322 22222333456677788888765 45543 3456677778888999999999
Q ss_pred hhcccCCchhHHH-hhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchh
Q psy10231 428 CIQMFSRRALATT-SAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRG 506 (607)
Q Consensus 428 l~d~~grr~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 506 (607)
+.||++||+.... ......++.+.......... . ............ ...+..+..+..+.+..|.+|++.|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 346 (399)
T TIGR00893 274 LSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN-----Y-VNIPYAALALVA-LGFFGLGAGAIGWALISDNAPGNIAG 346 (399)
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc-----c-chhHHHHHHHHH-HHHhchhhhhHHHHHHHhhcChhHHH
Confidence 9999999862111 11111111111111111100 0 111122222222 22223335677788999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhh
Q psy10231 507 IMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 507 ~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 555 (607)
++.|+.+.+.+++..++|.+.|.+.+..| +...+.+.+++++++.+..+
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888 88788887777777665544
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=1.9e-29 Score=263.42 Aligned_cols=356 Identities=16% Similarity=0.154 Sum_probs=251.3
Q ss_pred hhHHHhhhcccccccccccccc-ccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHH
Q psy10231 28 SWIGKLHCNNLTHAIPSILIPQ-LQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGW 106 (607)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~ 106 (607)
......+...++.++..+.+|. +.+ ++|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.++++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~l~~~i~~---~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (399)
T PRK05122 19 SIVMFTFISYLTIGLPLAVLPGYVHD---QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSG 95 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHH
Confidence 3444455666677777777775 566 899999999999999999999999999999999999999999999998887
Q ss_pred HHHHhc--------cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----
Q psy10231 107 TIITVS--------KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---- 173 (607)
Q Consensus 107 ~~~a~a--------~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---- 173 (607)
+.++++ .+++.+++.|+++|++.+...+ ...++.|++++++|+++.++...+..+|..+|+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 175 (399)
T PRK05122 96 LLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 776654 2577899999999999999999 999999999999999999999999999999999888766
Q ss_pred hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhc
Q psy10231 174 TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEIC 253 (607)
Q Consensus 174 ~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~ 253 (607)
+||+.+++..+..++..+
T Consensus 176 g~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 193 (399)
T PRK05122 176 GLAGLGLLIMLLALLGLL-------------------------------------------------------------- 193 (399)
T ss_pred cHHHHHHHHHHHHHHHHH--------------------------------------------------------------
Confidence 899888776655543333
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCc
Q psy10231 254 LPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRST 333 (607)
Q Consensus 254 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~ 333 (607)
.....|+++. + + ++ +.
T Consensus 194 ------------------------------------------------~~~~~~~~~~----~-~-~~-~~--------- 209 (399)
T PRK05122 194 ------------------------------------------------LARPRPAVPP----V-K-GE-RL--------- 209 (399)
T ss_pred ------------------------------------------------HHhcCCCCCC----C-C-cc-ch---------
Confidence 1111222110 0 0 00 00
Q ss_pred hhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHH
Q psy10231 334 AVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASII 413 (607)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 413 (607)
+.++.+++ .+.... ...+. .........+.+.++.+.+.+ +.......
T Consensus 210 ------------------------~~~~~~~~--~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 257 (399)
T PRK05122 210 ------------------------PFRRVLGR--VWPYGM-GLALA----SIGFGTIATFITLYYAARGWD-GAALALTL 257 (399)
T ss_pred ------------------------hHHHHHHH--HHHHHH-HHHHH----HHHHHHHHHHHHHHHHHcccc-cchHHHHH
Confidence 00011110 111111 11111 112344556667776665552 33444556
Q ss_pred HHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhh
Q psy10231 414 VAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPW 493 (607)
Q Consensus 414 ~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (607)
..++.+++.++.+++.||+++|+.+..+..+..++.+.+... ++.+..+....+.+.+.+. ..+...
T Consensus 258 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~~~-~~~~~~ 324 (399)
T PRK05122 258 FGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA------------PSPWMALIGAALTGFGFSL-VFPALG 324 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHhHHH-HHHHHH
Confidence 677788899999999999999998887777766666555431 1222223333333333322 234444
Q ss_pred hhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 494 VMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 494 ~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
....|..|++.|+++.|+.+...+++..+++.+.|.+.+..|++..++..+++++++.++..++
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 325 VEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6667889999999999999999999999999999999999999988888888777776665543
No 31
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=1.6e-29 Score=265.37 Aligned_cols=375 Identities=12% Similarity=0.053 Sum_probs=269.4
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...++..+..+...+.+|.+.+ +++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQ---MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHH
Confidence 3344555666677788888887 8888999999999999999999999999999999999999999888887766554
Q ss_pred h-----ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHH
Q psy10231 111 V-----SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSA 180 (607)
Q Consensus 111 ~-----a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~ 180 (607)
. .++++.+++.|+++|++.+...+ ..+++.|+.|+++|+++.++...+.++|..+|+.+++.+ +|++.|+
T Consensus 101 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~ 180 (417)
T PRK10489 101 LNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYG 180 (417)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHH
Confidence 2 56789999999999999999888 899999999999999999999999999999999998876 8999998
Q ss_pred HhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCccc
Q psy10231 181 ACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGY 260 (607)
Q Consensus 181 ~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~ 260 (607)
+.++..++..++.+.+||+++.
T Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~---------------------------------------------------------- 202 (417)
T PRK10489 181 LAAAGTFITLLPLLRLPALPPP---------------------------------------------------------- 202 (417)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC----------------------------------------------------------
Confidence 8777766555533333332110
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHH
Q psy10231 261 LSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAEL 340 (607)
Q Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (607)
. +++.++ .
T Consensus 203 ----------------------------------------------------~--~~~~~~------------------~ 210 (417)
T PRK10489 203 ----------------------------------------------------P--QPREHP------------------L 210 (417)
T ss_pred ----------------------------------------------------C--cccccc------------------h
Confidence 0 000000 0
Q ss_pred HHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHH
Q psy10231 341 KEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLR 418 (607)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~ 418 (607)
++. .+.++..++++..+...+..+ +... ......+.|.+.++ .|.+.. .+......+++.
T Consensus 211 ~~~------------~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~ 272 (417)
T PRK10489 211 RSL------------LAGFRFLLASPVVGGIALLGG-LLTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGA 272 (417)
T ss_pred HHH------------HHHHHHHHcChHHHHHHHHHH-HHHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHH
Confidence 000 001223344443332222211 1111 23456677888876 566543 456666778888
Q ss_pred HHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcc
Q psy10231 419 FFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAE 498 (607)
Q Consensus 419 ~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 498 (607)
+++.++.+++.||.++++.+..+.....++.+.+... ...+......++++.+.+ ...+...++..|
T Consensus 273 ~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 339 (417)
T PRK10489 273 ALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM------------PMWILAVLCLALFGYLSA-ISSLLQYTLLQT 339 (417)
T ss_pred HHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc------------chHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 9999999999999877777777766666665544331 111222223333332222 223445578889
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHHHH
Q psy10231 499 LFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLLEI 569 (607)
Q Consensus 499 ~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (607)
..|++.|+++.|+.+...+++..+++.+.|.+.+..|....+...+.+.++..++.....+++|+++.+|.
T Consensus 340 ~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 340 QTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred hCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999999999999999999999999999998888888888888777777777788887766553
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=3.5e-29 Score=259.10 Aligned_cols=349 Identities=12% Similarity=0.049 Sum_probs=250.3
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
..++..|.+.+ ++|+++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++
T Consensus 21 ~~~~~~~~~~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 21 TWTLLAPPLGR---YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred hhhhHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcC
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAV 196 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~ 196 (607)
|+++|++.+..++ ...++.|+++ ++|+++.++...+.++|..+++.+...+ +||+.|++.+++.++..+..
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~--- 173 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG--- 173 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH---
Confidence 9999999999988 8888889886 6799999999999999988765555444 89999999888877765522
Q ss_pred CCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHH
Q psy10231 197 PETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 276 (607)
Q Consensus 197 pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~ 276 (607)
T Consensus 174 -------------------------------------------------------------------------------- 173 (377)
T TIGR00890 174 -------------------------------------------------------------------------------- 173 (377)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCcc
Q psy10231 277 YSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSM 356 (607)
Q Consensus 277 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (607)
.++++|.|+. .+.++++ . .+..
T Consensus 174 --------------------------~~~~~~~~~~--~~~~~~~--------------~----------------~~~~ 195 (377)
T TIGR00890 174 --------------------------AFLIGYPPGQ--LIKTNIE--------------V----------------SVKD 195 (377)
T ss_pred --------------------------HHheecCchh--ccccCcc--------------c----------------chhh
Confidence 2222222110 0000000 0 0000
Q ss_pred chhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCc
Q psy10231 357 DHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRR 435 (607)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr 435 (607)
.+.++.+++++.+... ....+.. ........+.+.+.++.+.+.. ......+..+..+++.++.+++.||++||
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 270 (377)
T TIGR00890 196 YTVWEMLRTPQFWVLY-LSFFLNA----VSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ 270 (377)
T ss_pred hhHHHHHcCccHHHHH-HHHHHHh----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1223455555544322 1111111 1122333445556666666443 45567778888999999999999999999
Q ss_pred hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHH
Q psy10231 436 ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSL 515 (607)
Q Consensus 436 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 515 (607)
+.+..+.....++.+.+... +.................. ....+....+..|.+|++.|+++.|+.+..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 339 (377)
T TIGR00890 271 KTMSIVFGISAVGMAAMLFI----------PMLNDVLFLATVALVFFTW-GGTISLFPSLVSDIFGPANSAANYGFLYTA 339 (377)
T ss_pred hhhhHHHHHHHHHHHHHHHc----------ccchhHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhhhhhhHhHHHHHH
Confidence 99888777777766554431 0011111112222222222 222344457788999999999999999999
Q ss_pred HHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHH
Q psy10231 516 GYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAM 551 (607)
Q Consensus 516 ~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 551 (607)
..++..++|.+.|.+.+..|+...|.+.+++++++.
T Consensus 340 ~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 340 KAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999888888777666543
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=3.6e-29 Score=265.16 Aligned_cols=369 Identities=13% Similarity=0.083 Sum_probs=240.3
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc----chhHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK----GFTLL 118 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~----~~~~l 118 (607)
.+...|.+.+ + |++..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++++++ +++.+
T Consensus 48 ~~~~~p~l~~---~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 123 (452)
T PRK11273 48 FALAMPYLVE---Q-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVM 123 (452)
T ss_pred HHHhhHHHHH---c-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHH
Confidence 3456788776 7 99999999999999999999999999999999999999999999999999888763 78889
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHH-HHHHHhhhh----hHHHHHHHhHHHHHHHHHH
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVL-IVYSLGYIV----TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~-ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~ 192 (607)
++.|++.|++.+...+ ....+.|++|+++|++++++++.+.++|.. .+++++..+ +||+.|++.+++.++..+.
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 888999999999999999999999998864 455543222 8999999888776665442
Q ss_pred -HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHH
Q psy10231 193 -MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSL 271 (607)
Q Consensus 193 -~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~ 271 (607)
.+++||+|+...
T Consensus 204 ~~~~~~~~~~~~~------------------------------------------------------------------- 216 (452)
T PRK11273 204 AFAMMRDTPQSCG------------------------------------------------------------------- 216 (452)
T ss_pred HHHHccCCHhhcC-------------------------------------------------------------------
Confidence 233444432100
Q ss_pred HHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhh
Q psy10231 272 GVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQM 351 (607)
Q Consensus 272 g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (607)
.+ +.++.++.. .+.+ +.++++
T Consensus 217 -------------------------------------------~~-~~~~~~~~~---~~~~------------~~~~~~ 237 (452)
T PRK11273 217 -------------------------------------------LP-PIEEYKNDY---PDDY------------NEKHEQ 237 (452)
T ss_pred -------------------------------------------CC-Chhhhhhcc---cccc------------ccccCC
Confidence 00 000000000 0000 000000
Q ss_pred cCCccchh-hhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHh
Q psy10231 352 AGSSMDHC-AQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSAC 428 (607)
Q Consensus 352 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l 428 (607)
+....+.+ ...++++..|...+...+ .....+....|.|.++++ .|++.. ......+..+..+++.++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l 312 (452)
T PRK11273 238 ELTAKQIFMQYVLPNKLLWYIAIANVF-----VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWM 312 (452)
T ss_pred CccHHHHHHHHHHcChHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011 124455544432222221 122346677899999976 466533 4555667778888999999999
Q ss_pred hccc--CCchhHH-HhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccch
Q psy10231 429 IQMF--SRRALAT-TSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVR 505 (607)
Q Consensus 429 ~d~~--grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 505 (607)
+||+ +||.... ....+..++.+.+.. .+ ....+.........+.. ..+.......++.|.+|++.|
T Consensus 313 ~dr~~~~r~~~~~~~~~~l~~~~~~~~~~---~~-------~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~ 381 (452)
T PRK11273 313 SDKVFRGNRGATGVFFMTLVTIATIVYWL---NP-------AGNPTVDMACMIVIGFL-IYGPVMLIGLHALELAPKKAA 381 (452)
T ss_pred HHHHccCCcchHHHHHHHHHHHHHHHHHH---hc-------ccChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHcChhhh
Confidence 9998 4444322 211222222221111 00 01112222222222221 112222233567799999999
Q ss_pred hhHHHHHHHHHHHHHHH-HhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 506 GIMGGIVCSLGYLFIFT-TVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 506 ~~~~g~~~~~~~~~~~i-~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
|++.|+.+...++++.+ +|.+.|.+.|..|+...|++.+..++++.+....+
T Consensus 382 g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 382 GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998765 79999999999999989988888877777665544
No 34
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=3.8e-28 Score=252.94 Aligned_cols=353 Identities=15% Similarity=0.174 Sum_probs=245.3
Q ss_pred HHhhhcccccccccccccc-ccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQ-LQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII 109 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~ 109 (607)
...++..+..++..+.+|. +.+ |+|.|..+.|++.+.+.+++.+++++.|+++||+|||++++.+.+...++.+..
T Consensus 22 ~~~~~~~~~~~~~~p~l~~~l~~---~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 22 FAVFLTYMTVGLPLPVIPLFVHH---DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHH---hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 3344444445555666664 456 899999999999999999999999999999999999999999988877765433
Q ss_pred H---h-----ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHH
Q psy10231 110 T---V-----SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQ 176 (607)
Q Consensus 110 a---~-----a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr 176 (607)
. . .+|++.++++|+++|++.+...+ ..+++.|+.|+++|++++++.+.+..+|..+++.+++.+ +||
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 2 2 35789999999999999999999 999999999999999999999999999999999988766 888
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCC
Q psy10231 177 YTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPN 256 (607)
Q Consensus 177 ~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~ 256 (607)
+.+.+..+..++...
T Consensus 179 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 193 (392)
T PRK12382 179 ALALTTMVLPLLAWA----------------------------------------------------------------- 193 (392)
T ss_pred HHHHHHHHHHHHHHH-----------------------------------------------------------------
Confidence 876655444333222
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhh
Q psy10231 257 DRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVA 336 (607)
Q Consensus 257 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~ 336 (607)
.....||.+. ++++.
T Consensus 194 ---------------------------------------------~~~~~~~~~~---~~~~~----------------- 208 (392)
T PRK12382 194 ---------------------------------------------FNGTVRKVPA---HAGER----------------- 208 (392)
T ss_pred ---------------------------------------------HHHhccCCCC---CcccC-----------------
Confidence 1111222110 00000
Q ss_pred hhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Q psy10231 337 DAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYVASIIVAG 416 (607)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 416 (607)
. +.++.++ ..++..+..+ + ...+......+.+.++++.+.+ .........++
T Consensus 209 -~-------------------~~~~~~~--~~~~~~~~~~-l----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 260 (392)
T PRK12382 209 -P-------------------SLWSVVG--LIWKPGLGLA-L----QGVGFAVIGTFVSLYFASKGWA-MAGFTLTAFGG 260 (392)
T ss_pred -c-------------------hHHHHHH--HHHHhHHHHH-H----HHHHHhHHHHHHHHHHHhcCCc-hhHHHHHHHHH
Confidence 0 0000010 0011111111 1 1112344556667777765553 23344455667
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhh
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMI 496 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (607)
+.+++.++.+++.||+|+|+.+..+..+..++.+.+... ...+.......+.+.+.+ ...+......
T Consensus 261 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~g~~~~-~~~~~~~~~~ 327 (392)
T PRK12382 261 AFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA------------PTAWVALAGAALTGAGCS-LIFPALGVEV 327 (392)
T ss_pred HHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc------------ccHHHHHHHHHHHHHHHH-hHHHHHHHHH
Confidence 778899999999999999999888777777766554431 112222222333332222 2234445677
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 497 AELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 497 ~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
.|.+|++.|+++.|+.+...+++..++|.+.+.+.+..|+...+...+.+.+++.++.++.
T Consensus 328 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 328 VKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 8889999999999999999999999999999999999999999999888888777766544
No 35
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=4.3e-28 Score=258.91 Aligned_cols=390 Identities=14% Similarity=0.057 Sum_probs=258.3
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS 112 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a 112 (607)
.++..++.....+.+|.+.+ ++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++
T Consensus 19 ~~~~~~~~~~~~~~~p~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 19 FFMQSLDTTIVNTALPSMAQ---SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHhHHHHHHHHHHHHH---HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh
Confidence 35566677777788888888 999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHH
Q psy10231 113 KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVAL 187 (607)
Q Consensus 113 ~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~ 187 (607)
++++.++++|+++|++.+...+ ..+++.|++|+++|+++.++.....++|..+++.+++.+ +||+.|++..+...
T Consensus 96 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 96 GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999998877 99999999888776
Q ss_pred HHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhh
Q psy10231 188 VGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGP 266 (607)
Q Consensus 188 ~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~ 266 (607)
+..+.. ...|+.+.. ..+.+ ..+...
T Consensus 176 l~~~~~~~~~~~~~~~---~~r~~--------------------------------------------------~~~~~~ 202 (471)
T PRK10504 176 IGAIATLMLMPNYTMQ---TRRFD--------------------------------------------------LSGFLL 202 (471)
T ss_pred HHHHHHHHhCCCcccc---CCCCC--------------------------------------------------hHHHHH
Confidence 665543 334443210 00110 000000
Q ss_pred HHHHHHHHHHHH-H--HHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHH
Q psy10231 267 VFVSLGVLIVYS-L--GYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEI 343 (607)
Q Consensus 267 ~~~~~g~~~~~~-~--~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 343 (607)
. ..+...... . ....+|........+...+..+..+...|. +
T Consensus 203 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------------------- 247 (471)
T PRK10504 203 L--AVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR------N--------------------------- 247 (471)
T ss_pred H--HHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh------c---------------------------
Confidence 0 000000000 0 001122211111111111111111111110 0
Q ss_pred HHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHH
Q psy10231 344 QQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFM 421 (607)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~ 421 (607)
..+..-..++++++.++..+. ..++.. .+......+.|.+++. .|.+.. .........+..+++
T Consensus 248 ---------~~~~~~~~~l~~~~~~~~~l~-~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 248 ---------NNRALFSLKLFRTRTFSLGLA-GSFAGR----IGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGM 313 (471)
T ss_pred ---------CCCCccCHHHhcccchHHHHH-HHHHHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 000011123566775544222 222221 2234556677877764 465433 455566666777778
Q ss_pred HHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccC
Q psy10231 422 AIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFP 501 (607)
Q Consensus 422 ~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 501 (607)
.++.+++.||+|||+.+..+..+..+....+.... .....+.........+.+.+.. .+....+..+..|
T Consensus 314 ~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~ 383 (471)
T PRK10504 314 KRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA---------LLGWYYLLPFVLFLQGMVNSTR-FSSMNTLTLKDLP 383 (471)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc---------ccccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCC
Confidence 89999999999999998888776766655544311 0111111112222222222222 3344577788999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhH
Q psy10231 502 LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMG 537 (607)
Q Consensus 502 ~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~ 537 (607)
++.++.+.|+.++...+|..+++.+.+.+.+..++.
T Consensus 384 ~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 384 DNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999998877653
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=3.6e-28 Score=251.97 Aligned_cols=361 Identities=15% Similarity=0.114 Sum_probs=251.8
Q ss_pred HHHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH
Q psy10231 30 IGKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII 109 (607)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~ 109 (607)
....++.+.......+.+|.+.+ |+|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~---~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAH---DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHH---HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 34445566666677788899988 999999999999999999999999999999999999999999999999999999
Q ss_pred HhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHH
Q psy10231 110 TVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAV 184 (607)
Q Consensus 110 a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~ 184 (607)
++++|++.+++.|+++|++.+...+ ...++.|++++++|++++++...+..+|..+++.+++.+ +||+.|++.++
T Consensus 86 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 9999999999999999999999999 889999999999999999999999999999999888776 89999999888
Q ss_pred HHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 185 VALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 185 ~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
+.++..+.
T Consensus 166 ~~~~~~~~------------------------------------------------------------------------ 173 (382)
T PRK10091 166 FNIAVLAS------------------------------------------------------------------------ 173 (382)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 76665442
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
..+++||.++ +.+ .+.+
T Consensus 174 -------------------------------------~~~~lp~~~~----~~~-~~~~--------------------- 190 (382)
T PRK10091 174 -------------------------------------IYFWVPDIRD----EAK-GGLR--------------------- 190 (382)
T ss_pred -------------------------------------HHHhCCCCCc----ccc-cCHH---------------------
Confidence 2233444321 000 0000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~ 422 (607)
...+.+++++.+... ... +....+.+....|.+.++.+ .|.+.+ ........++..+++.
T Consensus 191 -------------~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~ 252 (382)
T PRK10091 191 -------------EQFHFLRSPAPWLIF-AAT----MFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN 252 (382)
T ss_pred -------------HHHHHhcChHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh
Confidence 001123344322211 111 11112233334455555543 466543 5566777888899999
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
++.+++.||+++|+.+..+..+.+++.+.+.... +..+...........+......+.......+..|.
T Consensus 253 ~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (382)
T PRK10091 253 LLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG-----------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGG 321 (382)
T ss_pred HHHheeccccCchhHHHHHHHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc
Confidence 9999999999999988877776666654443210 11122222222222222222222222344455555
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhcHHHHHh-hhhHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 503 SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL-LNMGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 503 ~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
+.++.+ ..+...++|..++|.+.|.+.+. .++...+...++++.+.......+.+
T Consensus 322 ~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 322 ELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred hHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 555544 44677889999999999999985 57877787777666666555544433
No 37
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=2.9e-28 Score=259.11 Aligned_cols=362 Identities=11% Similarity=0.065 Sum_probs=230.0
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchh
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFT 116 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~ 116 (607)
.++....++..|.+.+ ++|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++|++
T Consensus 49 ~~~~~~~~~~~~~l~~---~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~ 125 (476)
T PLN00028 49 FVSTFAAAPLLPIIRD---NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSAT 125 (476)
T ss_pred HHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 3333345667788888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhh-------------hhHHHHHHHhH
Q psy10231 117 LLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYI-------------VTWQYTSAACA 183 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~-------------l~Wr~~f~~~~ 183 (607)
.++++|+++|++.+...+...++.|++|+++|+++.++.....++|..+++.+... .+||+.|++.+
T Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 126 GFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 99999999999988754466789999999999999999876666666655443321 26888888777
Q ss_pred HHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccc
Q psy10231 184 VVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSA 263 (607)
Q Consensus 184 ~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~ 263 (607)
++.++..+..+
T Consensus 206 ~l~l~~~l~~~--------------------------------------------------------------------- 216 (476)
T PLN00028 206 LLHIIMGILVL--------------------------------------------------------------------- 216 (476)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 77665544221
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHH
Q psy10231 264 FGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEI 343 (607)
Q Consensus 264 ~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 343 (607)
++.++.|. ++.++.+ ++.+.
T Consensus 217 ----------------------------------------~~~~~~p~-----~~~~~~~-------~~~~~-------- 236 (476)
T PLN00028 217 ----------------------------------------TLGQDLPD-----GNYRELK-------KSGTM-------- 236 (476)
T ss_pred ----------------------------------------HHcCcCCC-----CchhhHH-------hcCcc--------
Confidence 11122221 0000000 00000
Q ss_pred HHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHH
Q psy10231 344 QQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFM 421 (607)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~ 421 (607)
++.+....+++.+++++.|...+ . ++...........+.|.++.+ .|.+.. +.....+..+.++++
T Consensus 237 -------~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig 304 (476)
T PLN00028 237 -------PKDSFSKVLRYGVTNYRTWILAL-T----YGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFA 304 (476)
T ss_pred -------ccccHHHHHHHHHcCchhHHHHH-H----HHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 00000112344556665443211 1 111222234556677887754 477543 566777788999999
Q ss_pred HHHHhHhhcccCCch-------hHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhh
Q psy10231 422 AIIGSACIQMFSRRA-------LATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWV 494 (607)
Q Consensus 422 ~~~~g~l~d~~grr~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (607)
.+++|+++||++||+ .......+.++..+.+.. ....+......+++..+... ..+..+.
T Consensus 305 ~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~------------~~~~~~~~~~~~l~~~~~~~-~~~~~~~ 371 (476)
T PLN00028 305 RPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR------------ANSLGAAIVVMILFSIFVQA-ACGATFG 371 (476)
T ss_pred HhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc------------cchHHHHHHHHHHHHHHHHH-hhhhhcc
Confidence 999999999998652 111111111111111111 01112222222222222222 2233445
Q ss_pred hhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 495 MIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 495 ~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+..+..| +.++++.|+.+..+++|+.+++.+.+ ..+..+|...|++.+++.+++.++.++.
T Consensus 372 ~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 372 IVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred cCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6667655 68999999998888888888776654 1123457778888887777776665443
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=3.6e-28 Score=253.55 Aligned_cols=362 Identities=16% Similarity=0.153 Sum_probs=245.2
Q ss_pred hccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccc
Q psy10231 35 CNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKG 114 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~ 114 (607)
..+++....+...|.+.+ ++|.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 104 (398)
T TIGR00895 28 MDGYDLAAMGFAAPAISA---EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATN 104 (398)
T ss_pred HHHHHHHHHHhhHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccc
Confidence 345555666778888888 89999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVG 189 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~ 189 (607)
++.+++.|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|..+++.+++.+ +||+.|++.++..++.
T Consensus 105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 184 (398)
T TIGR00895 105 VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLL 184 (398)
T ss_pred hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHH
Confidence 99999999999999999999 999999999999999999999999999999999988776 8999998886555544
Q ss_pred HHH-HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHH
Q psy10231 190 FAA-MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVF 268 (607)
Q Consensus 190 ~~~-~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~ 268 (607)
.+. ..++||++
T Consensus 185 ~~~~~~~~~~~~-------------------------------------------------------------------- 196 (398)
T TIGR00895 185 LLLLMRFLPESI-------------------------------------------------------------------- 196 (398)
T ss_pred HHHHHHhCCCCC--------------------------------------------------------------------
Confidence 432 23344444
Q ss_pred HHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhh-hhHHHHHHHHH
Q psy10231 269 VSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVA-DAELKEIQQSL 347 (607)
Q Consensus 269 ~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~ 347 (607)
++..++ +.++.++..++........ +++.++
T Consensus 197 ------------------------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----- 228 (398)
T TIGR00895 197 ------------------------------------------DFLVSK-RPETVRRIVNAIAPQMQAEAQSALPE----- 228 (398)
T ss_pred ------------------------------------------hHHHhc-CHHHHHHHHHHHHHhccccccccccc-----
Confidence 332222 1111111111111000000 000000
Q ss_pred HHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHh
Q psy10231 348 KVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGS 426 (607)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g 426 (607)
++.+.+..++..+.+++++..+...... +..+......+....+.|.+.++.+.+.+ .........++.+++.++.+
T Consensus 229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (398)
T TIGR00895 229 -QKATQGTKRSVFKALFQGKTARITVLLW-LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFG 306 (398)
T ss_pred -cccccchhhHHHHHHhcchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011112222222222222222222 22223334456667788877777676543 45667777888999999999
Q ss_pred HhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchh
Q psy10231 427 ACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRG 506 (607)
Q Consensus 427 ~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 506 (607)
++.||++||+..... ....+...++... . ...+......++.+.+.+ ...+..+++..|.+|++.|+
T Consensus 307 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g 373 (398)
T TIGR00895 307 WLADRLGPRVTALLL-LLGAVFAVLVGST--L---------FSPTLLLLLGAIAGFFVN-GGQSGLYALMALFYPTAIRA 373 (398)
T ss_pred HHHhhcchHHHHHHH-HHHHHHHHHHHHH--h---------hCHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCHHHHH
Confidence 999999998444333 3333322222210 0 122223333333333333 33466678999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 507 IMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 507 ~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
++.|+.+.+.+++..++|.+.|.+
T Consensus 374 ~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 374 TGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999988864
No 39
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=2.1e-27 Score=246.76 Aligned_cols=340 Identities=15% Similarity=0.144 Sum_probs=239.4
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGR 122 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R 122 (607)
....+|.+.+ ++|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++++++|++.+++.|
T Consensus 39 ~~~~l~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 39 PVSLLTPMAQ---DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHhhHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 3456777777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCC
Q psy10231 123 FITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVP 197 (607)
Q Consensus 123 ~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~p 197 (607)
+++|++.+...+ ..+++.|++|+++|+++.++...+.++|..++|.+++.+ +||+.|++.+++.++..+.
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~----- 190 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW----- 190 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH-----
Confidence 999999999999 999999999999999999999999999999999999877 9999999887666554331
Q ss_pred CChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHH
Q psy10231 198 ETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 277 (607)
Q Consensus 198 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~ 277 (607)
T Consensus 191 -------------------------------------------------------------------------------- 190 (394)
T PRK10213 191 -------------------------------------------------------------------------------- 190 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccc
Q psy10231 278 SLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMD 357 (607)
Q Consensus 278 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (607)
.....||+|+. + ++ ...
T Consensus 191 ------------------------~~~~~p~~~~~-----~-~~---------------------------------~~~ 207 (394)
T PRK10213 191 ------------------------IIKSLPSLPGE-----P-SH---------------------------------QKQ 207 (394)
T ss_pred ------------------------HHHHCCCCCcc-----c-cc---------------------------------chh
Confidence 22233443210 0 00 000
Q ss_pred hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCc
Q psy10231 358 HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYA-VNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRR 435 (607)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr 435 (607)
+.++.+++|..+..... . +....+.+....+. |.+.++.|.+.+ ........+++.+++.++.+++.||.++
T Consensus 208 ~~~~~l~~~~~~~~~~~-~----~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~- 281 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIA-I----FMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK- 281 (394)
T ss_pred HHHHHhcCHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 12234555544432221 1 11112233344454 666666677554 4556777788899999999999999644
Q ss_pred hhHHHhhHHHHHH-HHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHH
Q psy10231 436 ALATTSAFFMALS-MGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCS 514 (607)
Q Consensus 436 ~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~ 514 (607)
+.+..+..+..+. .++... . ...+.......+.+.++.. ..+...+++.+..| +.++.+.+....
T Consensus 282 ~~l~~~~~~~~~~~~~l~~~---~---------~~~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~ 347 (394)
T PRK10213 282 LALAGAPLVLAVSALVLTLW---G---------SDKIVATGVAIIWGLTFAL-VPVGWSTWITRSLA-DQAEKAGSIQVA 347 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHH---h---------hhHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHCc-ccHHHHHHHHHH
Confidence 4433333332222 222221 0 1223333333333333332 23434456677777 446677788888
Q ss_pred HHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 515 LGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 515 ~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
..+++..+++.+.|.+.+..|+...+...+.+.++..+.
T Consensus 348 ~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 348 VIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 889999999999999999988877776666555544433
No 40
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=1.2e-27 Score=250.68 Aligned_cols=379 Identities=11% Similarity=0.021 Sum_probs=260.1
Q ss_pred CCCCCccccccCcchhHHHhhhccccccccccccccccCCCcccccCccc-----hhHHHHHHHHHhhHhhhHHHHhhhh
Q psy10231 14 QKPSSIISISSDDASWIGKLHCNNLTHAIPSILIPQLQKPSSIISISSDD-----ASWIASLGVISTPVGSLFAGIFMDL 88 (607)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~-----~~~i~s~~~l~~~i~~~~~g~l~Dr 88 (607)
.+++++.+++++........++.++..+...+.+|.+.+ ++|.+..+ .+++.+.+.++..+++++.|+++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr 80 (408)
T PRK09874 4 CENDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE---QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR 80 (408)
T ss_pred CcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH---HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344555554443333333344556666667778888887 88888665 4889999999999999999999999
Q ss_pred hcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHH
Q psy10231 89 LGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 89 ~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~ 167 (607)
+|||+++..+.++..++.+++++++|++.+++.|++.|++.+ ..+ ...++.|.+++++|+++.++...+..+|..+++
T Consensus 81 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (408)
T PRK09874 81 KGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP 159 (408)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865 457 888999999999999999999999999999999
Q ss_pred HHhhhh----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhh
Q psy10231 168 SLGYIV----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSS 243 (607)
Q Consensus 168 ~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 243 (607)
.+++.+ +||+.|++.++..++..+.
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 188 (408)
T PRK09874 160 LAGGLLADSYGLRPVFFITASVLFLCFLV--------------------------------------------------- 188 (408)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence 888876 8999999888776655442
Q ss_pred hHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHH
Q psy10231 244 ACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEAR 323 (607)
Q Consensus 244 ~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~ 323 (607)
..+.++|.++. .+.++..
T Consensus 189 ----------------------------------------------------------~~~~~~~~~~~----~~~~~~~ 206 (408)
T PRK09874 189 ----------------------------------------------------------TLFCIRENFQP----VSKKEML 206 (408)
T ss_pred ----------------------------------------------------------HHHHhccCccc----ccchhhh
Confidence 22223332110 0000000
Q ss_pred HHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC
Q psy10231 324 NSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGS 403 (607)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 403 (607)
+ .++..+.+++++.+........+.. ........+.+.+..+.+.
T Consensus 207 ---------------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 251 (408)
T PRK09874 207 ---------------H----------------MREVVTSLKNPKLVLSLFVTTLIIQ----VATGSIAPILTLYVRELAG 251 (408)
T ss_pred ---------------H----------------HHHHHHhCcCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhc
Confidence 0 0001123445544432222222111 1123334445555554322
Q ss_pred C-cc----hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHH
Q psy10231 404 S-LD----DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACIL 478 (607)
Q Consensus 404 ~-~~----~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (607)
+ .+ ......+.++..+++.+..+++.||++||+.+..+.....+..+..... ...+.......
T Consensus 252 ~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 319 (408)
T PRK09874 252 NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV------------QTPLQLGILRF 319 (408)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHH
Confidence 1 21 1233444567777888899999999999998887776665555443321 11222222222
Q ss_pred HHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 479 ANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+.+.+. ....+....+..+..|++.|++..++.+.+..+|..++|.+.|.+.+..|+...|++.+++.+++.++.++.
T Consensus 320 ~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 320 LLGAAD-GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHhhh-HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 222222 223455556677888989999999999999999999999999999999999999999988888887776554
No 41
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=3.4e-28 Score=253.21 Aligned_cols=354 Identities=10% Similarity=0.093 Sum_probs=252.7
Q ss_pred HhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 32 KLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
.+++.+.+....+..+|.+.+ ++|+|+.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++..++.+++++
T Consensus 15 ~~~~~~~~~~~~g~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~ 91 (394)
T PRK03699 15 SYALTGALVIVTGMVMGPIAE---YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF 91 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666677888899988 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVV 185 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~ 185 (607)
++|++.+++.|+++|++.+...+ ...++.|++|+++|++..+.......+|..++|.+.+.+ +||+.|++.+++
T Consensus 92 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~ 171 (394)
T PRK03699 92 SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLV 171 (394)
T ss_pred cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999998888888888888776654 899999887777
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
.++..+..
T Consensus 172 ~~~~~~~~------------------------------------------------------------------------ 179 (394)
T PRK03699 172 YVAIFILT------------------------------------------------------------------------ 179 (394)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 66554411
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
.....||.+ +++.+ +
T Consensus 180 ------------------------------------~~~~~p~~~-----~~~~~-----------~------------- 194 (394)
T PRK03699 180 ------------------------------------LFSEFPALG-----KHAPK-----------A------------- 194 (394)
T ss_pred ------------------------------------HhcCCcccc-----ccCcc-----------c-------------
Confidence 111111100 00000 0
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAI 423 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~ 423 (607)
+.+. .++.+ ++ .+ ....+..+......+.+..|.|.++++ .|.+.. .........+...++.+
T Consensus 195 ------~~~~---~~~~~-~~----~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 259 (394)
T PRK03699 195 ------DKPV---AKEKW-GI----GV-LFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMW 259 (394)
T ss_pred ------cCcc---ccccC-Ch----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHH
Confidence 0000 00000 11 11 122222223333456778899999965 476543 45566677788899999
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
+.+++.||+++|+.+.....+..+....+.. . ...+......+..+. ...+..+....+..|..|.
T Consensus 260 ~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~- 325 (394)
T PRK03699 260 IFSFIVRFFDLQRILTVLAGLALVLMYLFVN---T---------DDPSHLLYAILGLGF-FSSAIYTTIITLGSQQTKV- 325 (394)
T ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHH---c---------CCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHccC-
Confidence 9999999999999887766555544433322 0 112222222222222 2223344455566676664
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHh
Q psy10231 504 VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 504 ~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 554 (607)
.++...+......++|..++|.+.|.+.+..|++..++..+++.+++.+..
T Consensus 326 ~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 326 ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 457788999999999999999999999999999888888877777665543
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=5.5e-28 Score=255.11 Aligned_cols=378 Identities=14% Similarity=0.122 Sum_probs=248.8
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc----cchhHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS----KGFTLL 118 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a----~~~~~l 118 (607)
.....|.+++ +|+++++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++. ++++.+
T Consensus 46 ~~~~~p~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 121 (438)
T TIGR00712 46 FALAMPYLVE----QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIM 121 (438)
T ss_pred HHhhhHHHHH----cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHH
Confidence 3455676654 48999999999999999999999999999999999999999999999998888765 467788
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHH
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~ 192 (607)
.+.|++.|++.+...+ ...++.|++|+++|++++++.+.+.++|..+++.+.... +||+.|++.+++.++..+.
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~ 201 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALF 201 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 8999999999999999 999999999999999999999999999998887665432 8999999988887775542
Q ss_pred -HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHH
Q psy10231 193 -MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSL 271 (607)
Q Consensus 193 -~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~ 271 (607)
.+++||+|+....+
T Consensus 202 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 216 (438)
T TIGR00712 202 AFAMMRDTPQSCGLP----------------------------------------------------------------- 216 (438)
T ss_pred HHHhccCCHHhcCCC-----------------------------------------------------------------
Confidence 23445544321000
Q ss_pred HHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhh
Q psy10231 272 GVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQM 351 (607)
Q Consensus 272 g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (607)
+.++. +++...... ++ +++
T Consensus 217 ----------------------------------------------~~~~~-------~~~~~~~~~------~~--~~~ 235 (438)
T TIGR00712 217 ----------------------------------------------PIEEY-------RNDYPDDYN------EK--AEQ 235 (438)
T ss_pred ----------------------------------------------Cchhc-------ccccccccc------cc--ccc
Confidence 00000 000000000 00 000
Q ss_pred cCCccc-hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCcc-hHHHHHHHHHHHHHHHHHHhHh
Q psy10231 352 AGSSMD-HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSLD-DYVASIIVAGLRFFMAIIGSAC 428 (607)
Q Consensus 352 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~g~l 428 (607)
+.+..+ .....++++..+...+... +.....+.+..|.|.++++. |.+.. ......+..+.++++.++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 310 (438)
T TIGR00712 236 ELTAKEIFMQYVLPNKLLWYIAIANV-----FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWM 310 (438)
T ss_pred ccchHHHHHHHHccCchHHHHHHHHH-----HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0113455664443222212 22233466778999999863 65443 5566777888899999999999
Q ss_pred hcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhH
Q psy10231 429 IQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIM 508 (607)
Q Consensus 429 ~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 508 (607)
.||+++++....+.....+..+...... .. +....+.........+. ...+..........|.+|++.|+++
T Consensus 311 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~ 382 (438)
T TIGR00712 311 SDKVFKGNRGATGVFFMTLVTIAVIVYW-MN------PAGNPLVDMICMIVIGF-LIYGPVMLIGLHALELAPKKAAGTA 382 (438)
T ss_pred HHHhccCcccHHHHHHHHHHHHHHHHHH-hc------CCCchHHHHHHHHHHHH-HHccHHHHHHHHHHHhcChhheeee
Confidence 9999654322222222211111111100 00 01112222221222111 1122222222457799999999999
Q ss_pred HHHHHHHHHHHH-HHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 509 GGIVCSLGYLFI-FTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 509 ~g~~~~~~~~~~-~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.|+.+..+++++ .++|.+.|.+.++.|+...+.+..++.+++.+...+.+||.|+
T Consensus 383 ~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 383 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred hhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999998875 6899999999999999989888888888888887777777653
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=1.2e-27 Score=256.57 Aligned_cols=393 Identities=11% Similarity=0.094 Sum_probs=264.6
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...+...++.....+.+|.+.+ ++|.+..+.+|+.+.+.++..++.++.|+++||+|||++++.+.++..+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIAG---DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh
Confidence 3445567788888889999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHH
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVV 185 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~ 185 (607)
+++|++.++++|+++|++.+...+ ..+++.|++|+++|+++.+++..+..+|..+++.+++.+ +||+.|++.+++
T Consensus 86 ~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~ 165 (485)
T TIGR00711 86 VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPI 165 (485)
T ss_pred CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHH
Confidence 999999999999999999999999 999999999999999999999999999999999999877 999999999888
Q ss_pred HHHHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 186 ALVGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 186 ~~~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
+++..++. +.+||.++. +.++.|..... + .........+..+..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~---~~~~~d~~g~~-----------------l----~~~~~~~~~~~~~~~~~--------- 212 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPA---ASENFDFLGLL-----------------L----LSVGLGSLLYGLSEGPE--------- 212 (485)
T ss_pred HHHHHHHHHHHcCCcccc---ccCCCcHHHHH-----------------H----HHHHHHHHHHHHhhCCC---------
Confidence 77766554 456764321 00111000000 0 00000001111111000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHH-Hhhh-HHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYT-SAAC-AVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKE 342 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~-~~~~-~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 342 (607)
.+|... .... .+.+.+.+ ..+...|
T Consensus 213 ------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------------------------------- 239 (485)
T TIGR00711 213 ------------------RGWFDSNEILILSITGLVAI-IAFVVWE---------------------------------- 239 (485)
T ss_pred ------------------CCCCCchHHHHHHHHHHHHH-HHHHHHH----------------------------------
Confidence 011100 0000 00000000 0000000
Q ss_pred HHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHH
Q psy10231 343 IQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFF 420 (607)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~ 420 (607)
...+......+.+++++++...+..+.. ....+....+.|.++++ .|.+. +.+.......++.++
T Consensus 240 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~ 306 (485)
T TIGR00711 240 --------LTDDNPLVDLRLFKYRNFTIGCVYMSLL-----GLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPML 306 (485)
T ss_pred --------HcCCCCccCHHHHcCCChHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 0000111123466677655433222222 22345666788888876 46654 356677777888999
Q ss_pred HHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc
Q psy10231 421 MAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF 500 (607)
Q Consensus 421 ~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 500 (607)
+.++.+++.||++||+.+..+..+.+++...+.... ..+...+.......+.+.+.+....+ ......+..
T Consensus 307 ~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~g~g~~~~~~~-~~~~~~~~~ 377 (485)
T TIGR00711 307 SSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF--------TPDTPFLAIALPQFIRGFGMGCFFMP-LTTIALSGL 377 (485)
T ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC--------CCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence 999999999999999998888777777666554211 11122222233333333333332223 335566778
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh
Q psy10231 501 PLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL 534 (607)
Q Consensus 501 p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~ 534 (607)
|++.|+++.|+.+...++|+.+++.+.+.+.++.
T Consensus 378 ~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 378 PPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888754
No 44
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=5.7e-27 Score=241.40 Aligned_cols=365 Identities=12% Similarity=0.083 Sum_probs=243.8
Q ss_pred cccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc-----cch
Q psy10231 41 AIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-----KGF 115 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-----~~~ 115 (607)
.+.+++.+.+.+. ++|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++.+++++++ +|+
T Consensus 51 ~~~~~l~~~~~~~--~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~ 128 (462)
T PRK15034 51 MLFSAVTVNLNKI--GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPF 128 (462)
T ss_pred HHHHHHHHHhhhh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCH
Confidence 3456666776542 799999999999999999999999999999999999999999999999999999987 899
Q ss_pred hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---------hHHHHHHHhHHH
Q psy10231 116 TLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---------TWQYTSAACAVV 185 (607)
Q Consensus 116 ~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---------~Wr~~f~~~~~~ 185 (607)
+.+++.|++.|++ +..++ ....+++++|+++||+++++.....++|..+++.+...+ +|+....
T Consensus 129 ~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~----- 202 (462)
T PRK15034 129 GIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQ----- 202 (462)
T ss_pred HHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccc-----
Confidence 9999999999998 66778 999999999999999999999777777776665554321 0000000
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
T Consensus 203 -------------------------------------------------------------------------------- 202 (462)
T PRK15034 203 -------------------------------------------------------------------------------- 202 (462)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhh-hccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAA-MHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
..+...+||....+-.++.++..+. ++..++.|. .
T Consensus 203 ------------~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~----------------------------- 238 (462)
T PRK15034 203 ------------ADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---S----------------------------- 238 (462)
T ss_pred ------------cccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---c-----------------------------
Confidence 0011233444444333333333223 223333221 0
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAI 423 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 423 (607)
+....+..+.+|+|+.|...++ .++.+.++..+..+.|.+.++ .++.. ......+..+...+..+
T Consensus 239 --------~~~~~~~~~vlk~~~~Wllsll-----y~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rp 304 (462)
T PRK15034 239 --------RASIADQLPVLQRLHLWLLSLL-----YLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARS 304 (462)
T ss_pred --------ccCHHHHHHHhCCCchhHHHHH-----HHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence 0011233456778877653222 234444566777788888866 33222 23334455677888999
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc-
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL- 502 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~- 502 (607)
++|+++||+|+|+++..+.+.+.+....+.... +.. ...+.+......+......+.+. ...+.++.+.+|+
T Consensus 305 lgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~l--p~~----~~~~~~~~~~~~~~l~~~~G~gn-gsvfk~ip~~f~~~ 377 (462)
T PRK15034 305 VGGAISDKFGGVRVTLINFIFMAIFSALLFLTL--PGT----GSGNFIAFYAVFMGLFLTAGLGS-GSTFQMIAVIFRQI 377 (462)
T ss_pred hhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--ccc----cccHHHHHHHHHHHHHHHhcccc-hHHHHhhHHHHhhh
Confidence 999999999999999888876666654332211 110 00111222222222223333332 3345677777874
Q ss_pred --------------------cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhcc
Q psy10231 503 --------------------SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFL 558 (607)
Q Consensus 503 --------------------~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 558 (607)
++-|.+.|+....+.+|+++.|.+.+...+..| +...++.+.+..+++.++.+.+.
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 378 TIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred hhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 146889999999999999999999998888765 55567777777777777776653
No 45
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=2.2e-28 Score=253.24 Aligned_cols=363 Identities=16% Similarity=0.106 Sum_probs=244.3
Q ss_pred hccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccc
Q psy10231 35 CNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKG 114 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~ 114 (607)
+..++....+...|.+.+ ++|.+..+.+++.+.+.++..+++++.|+++||+|||++++.+.++..++.++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVE---EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred HHHHhHHhhhhhhHHHHH---HhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 344566667788898888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHH-HHhhhh----hHHHHHHHhHHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY-SLGYIV----TWQYTSAACAVVALV 188 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~-~l~~~l----~Wr~~f~~~~~~~~~ 188 (607)
++.+++.|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|..+++ .++..+ +||+.|++.+++.++
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 99999999999999999999 999999999999999999999999999999999 455444 899999988877666
Q ss_pred HHHH-HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhH
Q psy10231 189 GFAA-MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPV 267 (607)
Q Consensus 189 ~~~~-~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~ 267 (607)
..+. .++.||+|+....+..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 185 (379)
T TIGR00881 163 VSLICFLLLRDSPQSCGLPPAEE--------------------------------------------------------- 185 (379)
T ss_pred HHHHHheeeCCCccccccCcccc---------------------------------------------------------
Confidence 5443 234454432110000000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHH
Q psy10231 268 FVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSL 347 (607)
Q Consensus 268 ~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (607)
.+.++ .+ .+. +.
T Consensus 186 -------------------------------------------------~~~~~----------~~--~~~-------~~ 197 (379)
T TIGR00881 186 -------------------------------------------------MPNEE----------PD--GDA-------EK 197 (379)
T ss_pred -------------------------------------------------Ccccc----------cc--ccc-------cc
Confidence 00000 00 000 00
Q ss_pred HHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHHHHHHH
Q psy10231 348 KVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFFMAIIG 425 (607)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~ 425 (607)
++++........++.++++..+...+.. +...........+.|.++++ .+.+. +.........+..+++.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (379)
T TIGR00881 198 KEEELTKKQIFLQYVLLNKVLWYISLGY-----VFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLA 272 (379)
T ss_pred ccccccchHHHHHHHHhcchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHH
Confidence 0000011112334556666544322221 12222345667778888764 46654 35566777788889999999
Q ss_pred hHhhcccCC-chhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc
Q psy10231 426 SACIQMFSR-RALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV 504 (607)
Q Consensus 426 g~l~d~~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 504 (607)
+++.||..+ |+.... ..........+...... .....+......... .....+..+....+..|.+|++.
T Consensus 273 g~l~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 343 (379)
T TIGR00881 273 GWLSDKLFNGRRGPLA-VFFMALIIVSLLVYWLN-------PAANPLMDLICLFAL-GFLVYGPQMLIGVIASELAPKKA 343 (379)
T ss_pred HHHHHHHcCCcchHHH-HHHHHHHHHHHHHHhcC-------cchhHHHHHHHHHHH-HHHHhhhhHHHHHHHHHhcCcch
Confidence 999998643 332222 11111111111111000 001111222222222 22223333444577899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHH
Q psy10231 505 RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGM 539 (607)
Q Consensus 505 r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~ 539 (607)
|+++.|+.+...+++..++|.+.|.+.+..|+...
T Consensus 344 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 344 AGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 99999999999999999999999999998887643
No 46
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=3.4e-28 Score=257.29 Aligned_cols=366 Identities=12% Similarity=0.088 Sum_probs=242.3
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHH-H
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCV-G 121 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~-~ 121 (607)
.+...|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.+++++++|++.+++ .
T Consensus 38 ~~~~~~~i~~---~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 114 (455)
T TIGR00892 38 VTVFFKELQQ---IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTA 114 (455)
T ss_pred hhhhHHHHHH---HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4556777777 99999999999999999999999999999999999999999999999999999999999998875 5
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhc-
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHA- 195 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~- 195 (607)
|+++|++.+...+ ...++.++++ ++|+++.++...+..+|..+++.+++.+ |||+.|++.+++.++..+..++
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 7999999998777 8888899885 7899999999999999999998888766 8999999998887765543221
Q ss_pred CCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHH
Q psy10231 196 VPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLI 275 (607)
Q Consensus 196 ~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~ 275 (607)
.|+.++.
T Consensus 194 ~~~~~~~------------------------------------------------------------------------- 200 (455)
T TIGR00892 194 RPVGPSQ------------------------------------------------------------------------- 200 (455)
T ss_pred CCCCccc-------------------------------------------------------------------------
Confidence 1211100
Q ss_pred HHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCc
Q psy10231 276 VYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSS 355 (607)
Q Consensus 276 ~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (607)
. +.+.+ ..+ ...+++. .+ +.+. .... +...
T Consensus 201 -----------------------------------~----~~~~~-~~~---~~~~~~~-~~-~~~~----~~~~-~~~~ 230 (455)
T TIGR00892 201 -----------------------------------R----VSKSK-SKE---GLPPDGS-TK-KLSK----KSTA-EKIN 230 (455)
T ss_pred -----------------------------------c----ccccc-ccc---cCCCCCc-cc-cccc----cchh-hhhh
Confidence 0 00000 000 0000000 00 0000 0000 0000
Q ss_pred cchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhccc--
Q psy10231 356 MDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMF-- 432 (607)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~-- 432 (607)
.....+.++++.++..... . +....+.+....+.+.+.++.|.+.. ......+.+++.+++.++.+++.||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~----~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~ 305 (455)
T TIGR00892 231 RFLDFSLFTHRGFLVYLSG-N----VIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWI 305 (455)
T ss_pred hhcchHHhcCchHHHHHHH-H----HHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 0111245666654432221 1 11222344556677888877776543 45666777888889999999999973
Q ss_pred CCchhHHHhh--HHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHH
Q psy10231 433 SRRALATTSA--FFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGG 510 (607)
Q Consensus 433 grr~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g 510 (607)
++|+...... +..+++.+.... . ...+..+...++++...+ ...+....++.|.+|++.++++.|
T Consensus 306 ~~~~~~~~~~~~~~~~l~~ll~~~---~---------~~~~~~~i~~~~~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g 372 (455)
T TIGR00892 306 RPHVQYLFSFALLFNGLTHLLCAL---A---------GDYTGLVIYCIFFGLSFG-SVGALLFEVLMDLVGAQRFSSAVG 372 (455)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH---h---------chHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHhhHHHHhhHHh
Confidence 3333333222 222222222211 0 122233333333333322 334555678889999999999999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHH
Q psy10231 511 IVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 511 ~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~ 553 (607)
+.+...+++..++|.+.|.+.+..+ +...|++.+++.+++.+.
T Consensus 373 ~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 373 LVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999999999999999998874 777777777766665543
No 47
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=7.8e-27 Score=241.95 Aligned_cols=351 Identities=12% Similarity=0.003 Sum_probs=251.4
Q ss_pred HHHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH
Q psy10231 30 IGKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII 109 (607)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~ 109 (607)
+...++.+++.+...+.+|.+.+ ++|.|..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~lp~~~~---~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~ 88 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTLVPLWLA---QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGL 88 (381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445677788888899999998 899999999999999999999999999999999999999999999999999999
Q ss_pred HhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-h--HHHHHHHhHHH
Q psy10231 110 TVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-T--WQYTSAACAVV 185 (607)
Q Consensus 110 a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~--Wr~~f~~~~~~ 185 (607)
++++|++.++++|+++|++.+...+ ....+.+..++++|+++++.+..+.++|..+|+.+++.+ . ++...+..+..
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 168 (381)
T PRK03633 89 GLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLV 168 (381)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHH
Confidence 9999999999999999999999999 888888999999999999999999999999999998876 1 12222222111
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
......
T Consensus 169 ~~~~~~-------------------------------------------------------------------------- 174 (381)
T PRK03633 169 LAAILP-------------------------------------------------------------------------- 174 (381)
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 111100
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
......+|++ .+
T Consensus 175 -----------------------------------~~~~~~~~~~------~~--------------------------- 186 (381)
T PRK03633 175 -----------------------------------LLFTRILNQQ------AE--------------------------- 186 (381)
T ss_pred -----------------------------------HHHhcccCCC------CC---------------------------
Confidence 0111111110 00
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAII 424 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 424 (607)
++...+.++.++++..+.. ...+.... ........+.|.++++.|.+.+ .+.......+..+++.+.
T Consensus 187 -------~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 254 (381)
T PRK03633 187 -------NHDSTSIWPMLKLRQARLG-VNGCIISG----IVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWP 254 (381)
T ss_pred -------CCCCCCHHHHHHhcchHHH-HHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0001123345566654432 11111111 1234455678888877676543 455566777888999999
Q ss_pred HhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc
Q psy10231 425 GSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV 504 (607)
Q Consensus 425 ~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 504 (607)
.+++.||+++|+.+..+.....++.+.+.. . ........+++. ......|.....+.|..|++.
T Consensus 255 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-------------~--~~~~~~~~l~g~-~~~~~~p~~~~~~~~~~~~~~ 318 (381)
T PRK03633 255 IGRLADRFGRLLVLRVQVFVVILGSIAMLS-------------Q--AAMAPALFILGA-AGFTLYPVAMAWACEKVEHHE 318 (381)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHHHHhh-------------h--HHHHHHHHHHHH-HHHhHHHHHHHHHHccCCHHH
Confidence 999999999999888776666665543311 0 011111122222 222345666677889999888
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 505 RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 505 r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
++.+.+..+...++|..++|.+.|.+.|+.++...|.+.+.+.++..+.
T Consensus 319 ~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 319 LVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999888888877777665544
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=4e-27 Score=242.62 Aligned_cols=345 Identities=14% Similarity=0.042 Sum_probs=247.7
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS 112 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a 112 (607)
.++..+..+...+.+|.+.. +++.++.+.+++.+.+.++..+++++.|+++||+|||++++.+.++..++.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 8 QLISLIGTAITQVALPLYVL---AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667777888877 889999999999999999999999999999999999999999999999999888888
Q ss_pred c-----chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHh
Q psy10231 113 K-----GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAAC 182 (607)
Q Consensus 113 ~-----~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~ 182 (607)
+ |++.++++|+++|++.+...+ ..+++.|++|+++|+++.++...+..+|.++++.+++.+ +||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 7 999999999999999999999 999999999999999999999999999999999998877 899999887
Q ss_pred HHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCccccc
Q psy10231 183 AVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLS 262 (607)
Q Consensus 183 ~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~ 262 (607)
++..++..+..+
T Consensus 165 ~~~~~~~~~~~~-------------------------------------------------------------------- 176 (365)
T TIGR00900 165 AVGFAISALLIV-------------------------------------------------------------------- 176 (365)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 776655444211
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHH
Q psy10231 263 AFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKE 342 (607)
Q Consensus 263 ~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 342 (607)
....||.++ +++.+.. ++..++
T Consensus 177 ----------------------------------------~~~~~~~~~----~~~~~~~--------------~~~~~~ 198 (365)
T TIGR00900 177 ----------------------------------------SVRIPELAA----SEIQALS--------------NAVLRD 198 (365)
T ss_pred ----------------------------------------hcccccCCC----ccccccc--------------hhHHHH
Confidence 111222110 0000000 000000
Q ss_pred HHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHH-hCCCcc-hHHHHHHHHHHHH
Q psy10231 343 IQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVL-YYAVNFFED-AGSSLD-DYVASIIVAGLRF 419 (607)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~ 419 (607)
. .+.+++.++++..+........... ...... .+.|.+.++ .+.+.. .........++.+
T Consensus 199 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (365)
T TIGR00900 199 T------------REGIKFVLKNPLLRTLLLLALLFNL-----VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGAL 261 (365)
T ss_pred H------------HhHHHHHHcCcHHHHHHHHHHHHHH-----HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 0 0123345556654432222221111 122233 667777765 465443 4566677788889
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++.++.+++.||.+||+.+..+....+++...+... . .+.+......++.+.+.. ...+....+..|.
T Consensus 262 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~ 329 (365)
T TIGR00900 262 LGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT----------P-PNFPLFLVLWFAIGVGYG-PINVPQGTLLQRR 329 (365)
T ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh----------c-hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 999999999999999998887766666655554431 0 112233333333333332 2345666889999
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh
Q psy10231 500 FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN 535 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g 535 (607)
.|++.|+++.|+.+...+++..+++.+.|.+.|..|
T Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 330 VPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999888643
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=3.6e-26 Score=238.62 Aligned_cols=363 Identities=11% Similarity=0.057 Sum_probs=239.8
Q ss_pred ccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH---h-
Q psy10231 36 NNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT---V- 111 (607)
Q Consensus 36 ~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a---~- 111 (607)
.....+.....+|.+.+ |+|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++++++. +
T Consensus 25 ~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~ 101 (402)
T TIGR00897 25 FMTGDGLEQGWLSPFLK---ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLG 101 (402)
T ss_pred HHHhhhhHHHhHHHHHH---HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33333334444555556 8899999999999999999999999999999999999999999999998877653 3
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHH-HHHHHHhhhh----hHHHHHHHhHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGV-LIVYSLGYIV----TWQYTSAACAVV 185 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~-~ig~~l~~~l----~Wr~~f~~~~~~ 185 (607)
.+|++.+++.|+++|+|.+...+ ..+++.+.+++++|++++++...+.++|. .+++.+++.+ +|+..++.....
T Consensus 102 ~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 102 HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 35788999999999999998888 88899999999999999999999999997 5788887654 665554443332
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
.++..+.
T Consensus 182 ~~~~~~~------------------------------------------------------------------------- 188 (402)
T TIGR00897 182 VLTGGVI------------------------------------------------------------------------- 188 (402)
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 2222111
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
..+..++.++- .++++.++ .++
T Consensus 189 ------------------------------------~~~~~~~~~~~-~~~~~~~~------------------~~~--- 210 (402)
T TIGR00897 189 ------------------------------------ALFSNKDIFTP-QHMQTREK------------------FSE--- 210 (402)
T ss_pred ------------------------------------HHhccCCCCCc-ccccCCcc------------------hhh---
Confidence 11112221100 00000000 000
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAII 424 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 424 (607)
..+.+++++++|+.+...+ ..+......+....|.|.+.++.|.+.. .........++..++.+.
T Consensus 211 ---------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 276 (402)
T TIGR00897 211 ---------LGKAATILFTNPNVLLGGM-----VRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVI 276 (402)
T ss_pred ---------HHHHHHHHHcChhHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Confidence 0012334566665443221 1222333456778889999888777544 345556677889999999
Q ss_pred HhHhhcccCCchhHH-HhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 425 GSACIQMFSRRALAT-TSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 425 ~g~l~d~~grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
.|+++||++||+.+. .+.+...++.+.+...... .....+.........+.... +..+. .....|..| +
T Consensus 277 ~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~G~~~~-~~~~~-~~~~~~~~~-~ 346 (402)
T TIGR00897 277 FGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH-------FGHSFAVALIIAIALGIFLA-GYVPL-AAVFPTLAP-K 346 (402)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc-------cCCcHHHHHHHHHHHHHHHH-HHHHH-HHHHHhhCc-c
Confidence 999999999887654 2222233322222211000 00112222222323332222 22333 345567655 5
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhh
Q psy10231 504 VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 504 ~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 556 (607)
.|+++.|+.+...+++..++|.+.+.+.+..|+...+++.+++.+++.++..+
T Consensus 347 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 347 HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998999888888777766554
No 50
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=4.8e-27 Score=250.26 Aligned_cols=361 Identities=15% Similarity=0.103 Sum_probs=240.6
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc--cchhHHHHHHHHHhhhhhhHh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS--KGFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a--~~~~~l~~~R~l~G~g~g~~~ 133 (607)
|++.+..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 788999999999999999999999999999999999999999999999998887554 678899999999999999999
Q ss_pred h-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhcc
Q psy10231 134 A-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQG 207 (607)
Q Consensus 134 ~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~ 207 (607)
+ ...++.|++|+++|+++.++...+..+|.++++.+++.+ +||+.|++.++++++..++.
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~-------------- 215 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW-------------- 215 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH--------------
Confidence 9 999999999999999999999999999999999888765 78888888888776665522
Q ss_pred ccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHH
Q psy10231 208 MAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQY 287 (607)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~ 287 (607)
T Consensus 216 -------------------------------------------------------------------------------- 215 (465)
T TIGR00894 216 -------------------------------------------------------------------------------- 215 (465)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhh-cCCccchhhhhhccC
Q psy10231 288 TSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQM-AGSSMDHCAQTFTNS 366 (607)
Q Consensus 288 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 366 (607)
....+|+|+.. +...++.+ +.+++..++++ +.+....+++.++++
T Consensus 216 ---------------~~~~~~~p~~~--~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 261 (465)
T TIGR00894 216 ---------------FVFPADDPSIH--PCISKFEK-----------------KYINSSLQGQKGSTRQSLPIKAIPKSL 261 (465)
T ss_pred ---------------HHHhcCCcccC--CCCCHHHH-----------------HHHHhhcccccCCCCCCCCHHHHhcCH
Confidence 22233443210 00000000 01111000000 111223466777766
Q ss_pred cchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHH---Hh
Q psy10231 367 AVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALAT---TS 441 (607)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~---~~ 441 (607)
..+. ..+..++...+.+.+..|.|.++++ .|.+.. .+....+..++.+++.++.|+++||+++|+... ..
T Consensus 262 ~~~~-----~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~ 336 (465)
T TIGR00894 262 PVWA-----IWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAAR 336 (465)
T ss_pred HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence 5443 2233334444567788899999865 466543 456666778888999999999999976442211 00
Q ss_pred hHHHHHHHHHHhhhh-hhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHH
Q psy10231 442 AFFMALSMGISGTYE-YYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFI 520 (607)
Q Consensus 442 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~ 520 (607)
.....++....+... .... .....+..+....+... ......+..+....|..|. .+|.+.|+.+..+.+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~ 409 (465)
T TIGR00894 337 KIFNGIGGLGPGIFAYALPY-----LSAAFYLTIIILTLANA-VSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGG 409 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----cCCchHHHHHHHHHHHH-HhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHH
Confidence 111111111100000 0000 00122222222222222 2222223333455677765 78999999999999999
Q ss_pred HHHhhhcHHHHHh---hhhHHHHHHHHHHHHHHHHHhhh
Q psy10231 521 FTTVKMYPDLMYL---LNMGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 521 ~i~~~i~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~ 556 (607)
.++|.+.|.+.+. .+|...|.+.+++.+++.++..+
T Consensus 410 ~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 410 LIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 9999999988764 34677888888777777666443
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.7e-26 Score=239.21 Aligned_cols=357 Identities=11% Similarity=0.051 Sum_probs=242.5
Q ss_pred HHhhhcccccccccccccc-ccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhh-hhhHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQ-LQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQL-TAIPFIIGWTI 108 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~-~~~l~~~~~~~ 108 (607)
...++.++..+...+.+|. +.+ ++|.|..+.|++.+.+.++..+.+++.|+++||+||||.++. +.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~ 80 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSE---EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLL 80 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHH
Confidence 3445566666777777775 456 899999999999999999999999999999999999987654 56666778888
Q ss_pred HHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccc--cchhhHHHHHHHHHHHHHhhhh----hHHHHHHH
Q psy10231 109 ITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYL--SAFGPVFVSLGVLIVYSLGYIV----TWQYTSAA 181 (607)
Q Consensus 109 ~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~--~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~ 181 (607)
+++++|++.+++.|+++|.+.+...| ..++..|+.++++|++. .+....+.++|..+++.+++.+ +||+.|++
T Consensus 81 ~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~ 160 (375)
T TIGR00899 81 FAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLT 160 (375)
T ss_pred HHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHH
Confidence 99999999999999999988888888 88899999887777654 5777777888888888888766 89999999
Q ss_pred hHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 182 CAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 182 ~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
.++..++..+.
T Consensus 161 ~~~~~~~~~~~--------------------------------------------------------------------- 171 (375)
T TIGR00899 161 AALAFVLCGVL--------------------------------------------------------------------- 171 (375)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 88876665552
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
..+++||.|++..++.+
T Consensus 172 ----------------------------------------~~~~~~~~~~~~~~~~~----------------------- 188 (375)
T TIGR00899 172 ----------------------------------------VWLFLPSYPRGAPGALT----------------------- 188 (375)
T ss_pred ----------------------------------------HHHhCCCcccCcccccC-----------------------
Confidence 22234444321000000
Q ss_pred HHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRF 419 (607)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~ 419 (607)
..+.++.+++++.+. ......+... .......+.|.+++ +.|.+.. ............+
T Consensus 189 --------------~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 249 (375)
T TIGR00899 189 --------------RLEVRGLLASRDTRL-LFVACTLMWG----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEI 249 (375)
T ss_pred --------------cchhhhhhcCcchHH-HHHHHHHHHH----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 000112334443332 2222212111 12334455666664 3465443 3344444455667
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++.++.+++.||++||+.+..+.....+....+.. . ++.+.......+...+.+. ..+....+..|.
T Consensus 250 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~ 316 (375)
T TIGR00899 250 PFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA---D---------NSLWALLMLQLLNAIFIGI-LAGIGMLYFQDL 316 (375)
T ss_pred HHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH---H---------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 78889999999999999887765544443332222 0 1122222222222222222 235555778888
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 500 FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
.|++ ++++.++.+...++|..++|.+.|.+.+..|+...+++.+++.+++.++..
T Consensus 317 ~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 317 MPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred Ccch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 8865 679999999999999999999999999999998888888877777666643
No 52
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=3.3e-26 Score=239.50 Aligned_cols=353 Identities=13% Similarity=0.039 Sum_probs=241.6
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHH
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLL 118 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l 118 (607)
+.....+.+|.+.+ ++|.++.+.++..+.+.+++.+++++.|+++||+|||++++.+..+..++.+++++++|++.+
T Consensus 28 ~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l 104 (406)
T PRK15402 28 ANDMIQPGMLAVVE---DFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQF 104 (406)
T ss_pred hhhhHhcchHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 44555666777777 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM 193 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~ 193 (607)
++.|+++|++.+...+ ..+++.|.+++++|.+..++......+|..++|.+++.+ +||+.|++.++..++..+.
T Consensus 105 ~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~- 183 (406)
T PRK15402 105 TLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFG- 183 (406)
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH-
Confidence 9999999999999989 999999999999999999988888888888888887766 8999999888777665542
Q ss_pred hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHH
Q psy10231 194 HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGV 273 (607)
Q Consensus 194 ~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~ 273 (607)
T Consensus 184 -------------------------------------------------------------------------------- 183 (406)
T PRK15402 184 -------------------------------------------------------------------------------- 183 (406)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcC
Q psy10231 274 LIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAG 353 (607)
Q Consensus 274 ~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (607)
..+..||+++.. ++..+ .++
T Consensus 184 ----------------------------~~~~~~~~~~~~---~~~~~------------------~~~----------- 203 (406)
T PRK15402 184 ----------------------------LWRAMPETAGRV---GEKLS------------------LKE----------- 203 (406)
T ss_pred ----------------------------HHHhCCCCCccc---ccccc------------------HHH-----------
Confidence 122234432100 00000 000
Q ss_pred CccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc
Q psy10231 354 SSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQM 431 (607)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~ 431 (607)
..+++++.+++|+.+...+... +.. ........+.|.++.+ .+.+.. .........++.+++.++.+++.||
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r 277 (406)
T PRK15402 204 -LGRDYKLVLKNRRFVAGALALG-LVS----LPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR 277 (406)
T ss_pred -HHHHHHHHHcCcHHHHHHHHHH-HHH----HHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0012334566665443222111 111 1123344556766643 466443 3344445556778899999999999
Q ss_pred cCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHH
Q psy10231 432 FSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGI 511 (607)
Q Consensus 432 ~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~ 511 (607)
+++|+....+.....++.+.+....... ....+.......+++.+.+.. .+..+...... +++.|+++.+.
T Consensus 278 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~~-~~~~~g~~~~~ 348 (406)
T PRK15402 278 RPLRSLIRMGLWPMVAGLLLAALATVIS-------SHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLFS-SDVSKGTVSAA 348 (406)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHcc-------cccHHHHHHHHHHHHHHHHHH-hhhHHHHHhhh-ccccccHHHHH
Confidence 9999988888777666666555421110 011222223333333333322 23332333333 44789999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHH
Q psy10231 512 VCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLA 550 (607)
Q Consensus 512 ~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~ 550 (607)
.+....++..+++.+.+.+.+..+.....+...+..++.
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999888777654444433333333
No 53
>KOG2532|consensus
Probab=99.95 E-value=7.8e-27 Score=242.14 Aligned_cols=357 Identities=16% Similarity=0.151 Sum_probs=267.0
Q ss_pred cccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc--cchhHHHHHHHHHhhhhhhH
Q psy10231 55 SIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS--KGFTLLCVGRFITGMAIGMS 132 (607)
Q Consensus 55 ~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a--~~~~~l~~~R~l~G~g~g~~ 132 (607)
.+++.|+.|.+++.++++.|+.+++++.|+++||+|-|+++..+.++.++++++...+ .+++.+++.|++||++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 3789999999999999999999999999999999999999999999999999999987 45678899999999999999
Q ss_pred hh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhc
Q psy10231 133 SA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQ 206 (607)
Q Consensus 133 ~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~ 206 (607)
+| ...+...|.|+++|++..++...+..+|.+++.++++.+ ||++.|++.++.+++..++
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~-------------- 211 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFIL-------------- 211 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHH--------------
Confidence 99 999999999999999999999999999999999888887 8999999999999888773
Q ss_pred cccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhH
Q psy10231 207 GMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQ 286 (607)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr 286 (607)
T Consensus 212 -------------------------------------------------------------------------------- 211 (466)
T KOG2532|consen 212 -------------------------------------------------------------------------------- 211 (466)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCC-ccchhhhhhcc
Q psy10231 287 YTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGS-SMDHCAQTFTN 365 (607)
Q Consensus 287 ~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 365 (607)
..++..|+|.- ++..+++|.++++++..+++..+ ....+++++++
T Consensus 212 ---------------w~~~~~d~P~~-------------------h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts 257 (466)
T KOG2532|consen 212 ---------------WFLFYSDSPSK-------------------HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTS 257 (466)
T ss_pred ---------------HHHHhcCCccc-------------------CCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcC
Confidence 33334444421 11223445555554443332222 56789999998
Q ss_pred CcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCc--------
Q psy10231 366 SAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRR-------- 435 (607)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr-------- 435 (607)
+..| +..+..++...+.+.+..|.|.|+++. +++.. .+....+..+...+..+++|.++||+.+|
T Consensus 258 ~~vw-----ai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~r 332 (466)
T KOG2532|consen 258 PPVW-----AIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVR 332 (466)
T ss_pred HHHH-----HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHH
Confidence 8655 445556666777899999999999864 77654 57778888899999999999999997653
Q ss_pred -hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc-CccchhhHHHHHH
Q psy10231 436 -ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF-PLSVRGIMGGIVC 513 (607)
Q Consensus 436 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~ 513 (607)
-.-.++....++.++.+++. +....+..++++.+.....+ ..... .+..... .++..+..+|+.+
T Consensus 333 kifn~i~~~~~ai~l~~l~~~----------~~~~~~~a~~~l~~~~~~~g--~~~~G-f~~~~~~~apq~a~~l~g~~~ 399 (466)
T KOG2532|consen 333 KIFNTIAFGGPAVFLLVLAFT----------SDEHRLLAVILLTIAIGLSG--FNISG-FYKNHQDIAPQHAGFVMGIIN 399 (466)
T ss_pred HHHHhHHHHHHHHHHHeeeec----------CCCcchHHHHHHHHHHHHcc--cchhh-hHhhhhhccchHHHHHHHHHH
Confidence 22223333444444444331 11222233333322222222 11112 2222222 4567899999999
Q ss_pred HHHHHHHHHHhhhcHHHHH---hhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 514 SLGYLFIFTTVKMYPDLMY---LLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 514 ~~~~~~~~i~~~i~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
.+..+.++++|.+.+.+.. ...|+..|++.+++.+++.++..++
T Consensus 400 ~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 400 FVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999999999999999983 3579999999999999888665554
No 54
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=3.9e-26 Score=237.29 Aligned_cols=338 Identities=14% Similarity=0.127 Sum_probs=238.8
Q ss_pred ccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccch
Q psy10231 36 NNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGF 115 (607)
Q Consensus 36 ~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~ 115 (607)
..+......+.+|.+.+ ++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++++++++
T Consensus 17 ~~~~~~~~~~~~p~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 93 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIAA---DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNI 93 (385)
T ss_pred HHHHHHHhcccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 34455566777888888 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHH
Q psy10231 116 TLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 116 ~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~ 190 (607)
+.+++.|+++|++.+...+ ..+++.|++|+++|+++.++.+....+|..+++.+++.+ +||+.|++.++..++..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999988876 89999998887766655
Q ss_pred HHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 191 AAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 191 ~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
+.
T Consensus 174 ~~------------------------------------------------------------------------------ 175 (385)
T TIGR00710 174 AL------------------------------------------------------------------------------ 175 (385)
T ss_pred HH------------------------------------------------------------------------------
Confidence 42
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHh
Q psy10231 271 LGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQ 350 (607)
Q Consensus 271 ~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (607)
..+..||+++. ++.++.++
T Consensus 176 -------------------------------~~~~~~~~~~~----~~~~~~~~-------------------------- 194 (385)
T TIGR00710 176 -------------------------------IFFILPETLPY----EARIQIST-------------------------- 194 (385)
T ss_pred -------------------------------HHHhCCCCCCC----cccCCHHH--------------------------
Confidence 22223443210 00000000
Q ss_pred hcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHHHHHHHhHh
Q psy10231 351 MAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFFMAIIGSAC 428 (607)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l 428 (607)
..+.+++.+++++.+...+... . .....+....+.|.+++ +.|.+.. .........+..+++.++.+++
T Consensus 195 ----~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 265 (385)
T TIGR00710 195 ----YFETFLLLLKSKMFWGYALIYG-A----SFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRF 265 (385)
T ss_pred ----HHHHHHHHHcCchhHHHHHHHH-H----HHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012234555665543222211 1 12224455666677765 4566443 4556667778889999999999
Q ss_pred hcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhH
Q psy10231 429 IQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIM 508 (607)
Q Consensus 429 ~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 508 (607)
.||+++|+.+..+.....++.+.+....... ...+........+.........+.......|..| +.++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~ 336 (385)
T TIGR00710 266 IKKWGAKSLLRMGLILFAVSAVLLEITAILG--------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTA 336 (385)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc--------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHH
Confidence 9999999988877666666655544321110 1122222222222222222234555577778877 568999
Q ss_pred HHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 509 GGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 509 ~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
.++.+...+.++.+.+.+.+.+.+.
T Consensus 337 ~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 337 SALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999887777777666644443
No 55
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=4.7e-26 Score=233.12 Aligned_cols=334 Identities=21% Similarity=0.275 Sum_probs=268.5
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS 112 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a 112 (607)
.+...++.....+..|.+.+ +++.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~ 84 (352)
T cd06174 8 FFLSGLDRGLLSPALPLLAE---DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA 84 (352)
T ss_pred HHHHHHhhhhhHhhHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh
Confidence 34556666777788888887 889999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHH
Q psy10231 113 KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVAL 187 (607)
Q Consensus 113 ~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~ 187 (607)
++++.+++.|++.|++.+...+ ..+++.|++|+++|++..++......+|..+++.+++.+ +||+.+++.++..+
T Consensus 85 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (352)
T cd06174 85 SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGL 164 (352)
T ss_pred ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999877 79999998887776
Q ss_pred HHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhH
Q psy10231 188 VGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPV 267 (607)
Q Consensus 188 ~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~ 267 (607)
+..+.
T Consensus 165 ~~~~~--------------------------------------------------------------------------- 169 (352)
T cd06174 165 LLALL--------------------------------------------------------------------------- 169 (352)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 65541
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHH
Q psy10231 268 FVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSL 347 (607)
Q Consensus 268 ~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (607)
..+.+ |
T Consensus 170 -----------------------------------~~~~~--~------------------------------------- 175 (352)
T cd06174 170 -----------------------------------LLFLL--R------------------------------------- 175 (352)
T ss_pred -----------------------------------HHHHH--H-------------------------------------
Confidence 11111 0
Q ss_pred HHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCcc-hHHHHHHHHHHHHHHHHHH
Q psy10231 348 KVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSLD-DYVASIIVAGLRFFMAIIG 425 (607)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~ 425 (607)
.+....+..+...........+.+.+.++. +.+.. .+.......+...++.++.
T Consensus 176 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 231 (352)
T cd06174 176 ------------------------LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLG 231 (352)
T ss_pred ------------------------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111222233334567777888888765 55433 5667788888999999999
Q ss_pred hHhhcccCCch-hHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc
Q psy10231 426 SACIQMFSRRA-LATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV 504 (607)
Q Consensus 426 g~l~d~~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 504 (607)
+++.||++||+ .+..+.....++.+..... .....................+....+..|..|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T cd06174 232 GLLSDRLGRRRLLLLIGLLLAALGLLLLALA-------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA 298 (352)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH
Confidence 99999999999 8888888877777666541 112223333333333334456777799999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 505 RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 505 r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
|++..|+.+...+++..+++.+.+.+.+..++...+.+.+++.+++.++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 299 RGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999988999889888888887776644
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=4.8e-27 Score=240.84 Aligned_cols=337 Identities=19% Similarity=0.248 Sum_probs=242.5
Q ss_pred hhhccccccccccccc-cccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 33 LHCNNLTHAIPSILIP-QLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p-~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
.++..++.....+.+| .+.+ ++|.+..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAE---ELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHC---CSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 3445556666777778 7777 99999999999999999999999999999999999999999999999999777777
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVA 186 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~ 186 (607)
++|++.++++|++.|++.+...+ ..+++.|++|+++|++++++...+.++|.++++.+++.+ +||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 78888999999999999999999 999999999999999999999999999999999999887 8999999999988
Q ss_pred HHHHHHH-hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 187 LVGFAAM-HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 187 ~~~~~~~-~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
++..++. ++.++.+....++.++
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 185 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPK-------------------------------------------------------- 185 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SST--------------------------------------------------------
T ss_pred hhhhhhHhhhhhhccccccccccc--------------------------------------------------------
Confidence 8876631 2222222110000000
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
+++
T Consensus 186 -----------------------------------------------------~~~------------------------ 188 (352)
T PF07690_consen 186 -----------------------------------------------------ESE------------------------ 188 (352)
T ss_dssp -----------------------------------------------------TTT------------------------
T ss_pred -----------------------------------------------------ccc------------------------
Confidence 000
Q ss_pred HHHHhhcCCccc-hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HHhCCC--cchHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMD-HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFF-EDAGSS--LDDYVASIIVAGLRFFM 421 (607)
Q Consensus 346 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~ 421 (607)
++.+.... .+++.++++..| ..+....+. .........+.|.++ +..+.+ .+......+..+...++
T Consensus 189 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (352)
T PF07690_consen 189 ----SKKPKPLKPGFKSLFKNPVLW-ILLIAFFLF----FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIG 259 (352)
T ss_dssp ------HHHCCCH-CTHHHHHHCCH-HHHHHHHHH----HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHH
T ss_pred ----cccccccccccccccccchhh-hhhhhhhHH----HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000111 244555555554 122222222 223455778888874 455666 23455677778888888
Q ss_pred HHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccC
Q psy10231 422 AIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFP 501 (607)
Q Consensus 422 ~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 501 (607)
.++.+++.||+++|+..........+..+.+...... ...........+.+. ......+....+..|..|
T Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 329 (352)
T PF07690_consen 260 SLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS---------SSPVWLIIALFLIGF-GFGIVFPILFSLIQELVP 329 (352)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH---------CHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC
Confidence 9999999999999877776666666665555442211 112222233333333 333345677789999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHh
Q psy10231 502 LSVRGIMGGIVCSLGYLFIFTTV 524 (607)
Q Consensus 502 ~~~r~~~~g~~~~~~~~~~~i~~ 524 (607)
++.|+++.|+.+...+++..++|
T Consensus 330 ~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 330 PEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999886
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=1.6e-25 Score=234.02 Aligned_cols=150 Identities=21% Similarity=0.208 Sum_probs=136.9
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHH
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLL 118 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l 118 (607)
...+..+.+|.+.+ +++.+..+.++..+.+.+++.+++++.|+++||+|||++++.+.++++++++++++++|++.+
T Consensus 31 ~~~~~~p~l~~i~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l 107 (413)
T PRK15403 31 TTDLIQPGIINVVR---DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQF 107 (413)
T ss_pred HHHhhccCHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 44455667777777 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
+++|+++|++.+...+ ..+++.|++++++|++.+++...+..+|..+||.+++.+ +||+.|++.++..++..+
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999988777 889999999999999999999999999999999998866 899999998887776655
No 58
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=3.3e-26 Score=238.31 Aligned_cols=353 Identities=20% Similarity=0.278 Sum_probs=228.6
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHH-----HHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASL-----GVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~-----~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
.+|....+...+.+.+.. ..+.++.+.+.+.+. .+++..+++++.|+++||+|||+++..+.++..++.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 84 (394)
T TIGR00883 6 WFDFYLYGFAAVLVFHTF-FPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 344444445555555521 123556666665543 33444578999999999999999999999999999999999
Q ss_pred ccchh--------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---------
Q psy10231 112 SKGFT--------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV--------- 173 (607)
Q Consensus 112 a~~~~--------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l--------- 173 (607)
++|+. .++++|+++|++.+...+ ..+++.|++++++|++..+....+..+|.++++.++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~ 164 (394)
T TIGR00883 85 LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDAL 164 (394)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHh
Confidence 99976 488999999999999999 999999999999999999999999999999988776432
Q ss_pred ---hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHH
Q psy10231 174 ---TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVA 250 (607)
Q Consensus 174 ---~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 250 (607)
+||+.|++.+++.++
T Consensus 165 ~~~~w~~~~~~~~~~~~~-------------------------------------------------------------- 182 (394)
T TIGR00883 165 LEWGWRIPFLVSAVLVLI-------------------------------------------------------------- 182 (394)
T ss_pred hccchHHHHHHHHHHHHH--------------------------------------------------------------
Confidence 455555554443333
Q ss_pred HhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHh
Q psy10231 251 EICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFR 330 (607)
Q Consensus 251 E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~ 330 (607)
..+.....||+|++..++++
T Consensus 183 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~------------ 202 (394)
T TIGR00883 183 ------------------------------------------------GLYLRRNLEETPVFEKAQEK------------ 202 (394)
T ss_pred ------------------------------------------------HHHHHHhcCCChhHHHHHhc------------
Confidence 22344445665432111000
Q ss_pred cCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hH
Q psy10231 331 RSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DY 408 (607)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~ 408 (607)
++....+.++.+++++ +.+...... .+......+....+.|.+++ +.+.+.. ..
T Consensus 203 ---------------------~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 258 (394)
T TIGR00883 203 ---------------------HKKKRGPIRETLTKHR--KPFLLGLGL-VIATTTTFYLITTYLPTYLTQTLGLSANSAL 258 (394)
T ss_pred ---------------------cccccCCHHHHHHhch--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCChhHHH
Confidence 0011123344454442 112222222 22333345666778888885 4465443 45
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHH-HHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 409 VASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSM-GISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
.......+...++.++.+++.||+|||+.+.....+..+.. ..+... . .....+.............. .
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~g~~~~-~ 328 (394)
T TIGR00883 259 LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL--L-------DSGSFTLFFFLVLGLALIGG-M 328 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH--h-------cCCchHHHHHHHHHHHHHHH-H
Confidence 56667778889999999999999999987765444333322 111110 0 01222333333333333332 2
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHH-HHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHH
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSL-GYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCA 546 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~-~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~ 546 (607)
..+....+..|.+|++.|+++.++.+.. ..++..++|.+.|.+.++.| +...++.....
T Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 329 YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 3455668899999999999999986544 55788899999999999887 55544444433
No 59
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=234.61 Aligned_cols=331 Identities=15% Similarity=0.063 Sum_probs=230.1
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGR 122 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R 122 (607)
..+.+|.+.+ ++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++++++|++.+++.|
T Consensus 25 ~~p~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (401)
T PRK11043 25 YLPAFKAIQA---DLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLR 101 (401)
T ss_pred HHhhHHHHHH---HHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3445555566 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCC
Q psy10231 123 FITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVP 197 (607)
Q Consensus 123 ~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~p 197 (607)
+++|++.+...+ ..+++.|+++++++++..+.......+|..++|.+++.+ +||+.|++.++..++..+..
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~---- 177 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPT---- 177 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH----
Confidence 999999998888 889999999999999988888888888888888888776 99999998887776655522
Q ss_pred CChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHH
Q psy10231 198 ETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 277 (607)
Q Consensus 198 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~ 277 (607)
T Consensus 178 -------------------------------------------------------------------------------- 177 (401)
T PRK11043 178 -------------------------------------------------------------------------------- 177 (401)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccc
Q psy10231 278 SLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMD 357 (607)
Q Consensus 278 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (607)
++++|+++ +++.++ ...
T Consensus 178 --------------------------~~~~~~~~----~~~~~~---------------------------------~~~ 194 (401)
T PRK11043 178 --------------------------LRLKPSKK----ARKQSQ---------------------------------DAL 194 (401)
T ss_pred --------------------------HHcCCCCC----ccccch---------------------------------HHH
Confidence 22233211 000000 001
Q ss_pred hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCch
Q psy10231 358 HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRA 436 (607)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~ 436 (607)
++++.+++++.+...+..... .........+.|.++++.|.+.. .+.......+..+++.++.+++.||+++|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~ 269 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAAC-----SAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ 269 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHH-----HHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 233455566544332222111 12234556677888877677543 344445556677888899999999999988
Q ss_pred hHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHH
Q psy10231 437 LATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLG 516 (607)
Q Consensus 437 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~ 516 (607)
..........++.+.+....... ....+............. ....+.......|..| +.++++.|+.+.++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~ 340 (401)
T PRK11043 270 LLPWLLVLFAVSVIAIWLASLLS-------HPSLVPLLIPFCVMAAAN-GAIYPIVVAQALRPFP-QATGKAAALQNTLQ 340 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-------cCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCc-ccChHHHHHHHHHH
Confidence 76555544444433322211110 011222222222222222 2334555556667676 46899999999999
Q ss_pred HHHHHHHhhhcHHHHHhhhhH
Q psy10231 517 YLFIFTTVKMYPDLMYLLNMG 537 (607)
Q Consensus 517 ~~~~~i~~~i~~~l~~~~g~~ 537 (607)
..++..++.+.+.+.+.....
T Consensus 341 ~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 341 LGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHHccCCChhH
Confidence 999999999999887754443
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.7e-25 Score=232.39 Aligned_cols=365 Identities=11% Similarity=0.020 Sum_probs=234.4
Q ss_pred hHHHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHH
Q psy10231 29 WIGKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTI 108 (607)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~ 108 (607)
.....++..+.........+.+.. |++.++.+.+++.+.+.+++.+++++.|+++||+|||++++.+.+++++++++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLK---ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 333444445433333344445555 88889999999999999999999999999999999999999999999999998
Q ss_pred HHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHH
Q psy10231 109 ITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAV 184 (607)
Q Consensus 109 ~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~ 184 (607)
++++.+. ++.|+++|++.+...| ..+++.|++|+++|+++.++......+|.++||.+++.+ .|+..+.+.+.
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~ 161 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCAL 161 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887664 7889999999999999 999999999999999999999999999999999999988 44444444433
Q ss_pred HHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 185 VALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 185 ~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
..++..+
T Consensus 162 ~~~~~~~------------------------------------------------------------------------- 168 (393)
T PRK11195 162 IYLLAAL------------------------------------------------------------------------- 168 (393)
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 3332322
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
..+.+||+|.....++. + .... .++.+
T Consensus 169 -------------------------------------~~~~l~~~~~~~~~~~~-~-~~~~--------------~~~~~ 195 (393)
T PRK11195 169 -------------------------------------FNLFIPRLGARRPGQSW-N-PIAL--------------LRDFF 195 (393)
T ss_pred -------------------------------------HHhcCCCCcccccccCC-C-HHHH--------------HHHHH
Confidence 22334443311000000 0 0000 00000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~ 422 (607)
...+.+++++..+..+.....+... .....+..+.++++ .|.+. ..+......+++.++++
T Consensus 196 ------------~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 196 ------------HACRVLWRDKLGRFSLAGTTLFWGA-----GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred ------------HHHHHHHhCchhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 0123455666544333222222111 22333344445443 35543 35566777788899999
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
++.+++.||.++|+....+.. .++....++. . ++.+.......+.+.+.+... +...+...|..|+
T Consensus 259 ~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~---~---------~~~~~~~~~~~~~G~~~g~~~-~~~~~~~q~~~~~ 324 (393)
T PRK11195 259 GAAARLVTLETVLRVLPAGIL-MGLVVLLMAL---Q---------HSLLPAYPLLILIGALGGFFV-VPMNALLQHRGHV 324 (393)
T ss_pred HHHHHHhcCCcccchHHHHHH-HHHHHHHHHH---H---------hHHHHHHHHHHHHHHhhhhhh-hhHHHHHHhhCcc
Confidence 999999999998877766543 3332222221 0 122222233323333333322 3344666677666
Q ss_pred cc-hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 503 SV-RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 503 ~~-r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+. +|.+.++.+...+++..++..+.+. .+..|....+.+.+...+++..+.+.+
T Consensus 325 ~~~~g~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 325 LVGAGHSIAVQNFNENLAMLLMLGLYSL-LVKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred cccchhHHHHHhHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 55 7999999999999999999988884 466776666666555555555554444
No 61
>KOG1330|consensus
Probab=99.95 E-value=4.3e-27 Score=231.93 Aligned_cols=154 Identities=14% Similarity=0.176 Sum_probs=142.6
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchh
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFT 116 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~ 116 (607)
-+|...+..+.+.++. .+|++++..|++.+.+.+.+.+++++.|+++|||+||+++.+|..++.++.++++++..||
T Consensus 46 y~Dr~~iagv~~~v~~---~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw 122 (493)
T KOG1330|consen 46 YADRYTIAGVLKEVQT---YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW 122 (493)
T ss_pred HhhhhhhhhhhHHHHH---hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666666 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~ 190 (607)
++.++|.+.|+|.+...| ++++++|.++..+|++++++++.+..+|..+|.+.+..+ .|||.|+..++++++..
T Consensus 123 q~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~ 202 (493)
T KOG1330|consen 123 QVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVG 202 (493)
T ss_pred HHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999998887 59999999999999887
Q ss_pred HHH
Q psy10231 191 AAM 193 (607)
Q Consensus 191 ~~~ 193 (607)
++.
T Consensus 203 ~L~ 205 (493)
T KOG1330|consen 203 LLV 205 (493)
T ss_pred HHH
Confidence 743
No 62
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=1.3e-25 Score=233.82 Aligned_cols=147 Identities=18% Similarity=0.262 Sum_probs=135.5
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVG 121 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~ 121 (607)
...+.+|.+.+ ++|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++..++.+++.+++|++.+++.
T Consensus 21 ~~~~~lp~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 97 (392)
T PRK10473 21 MYLVGLPRIAA---DLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAG 97 (392)
T ss_pred HHhhhHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 34467788888 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
|+++|++.+...+ ..+++.|.+++++|+++.++.+....+|..++|.+++.+ +||+.|++.++..++..+
T Consensus 98 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 98 RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999888766 899999998877766554
No 63
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1e-25 Score=220.92 Aligned_cols=358 Identities=16% Similarity=0.166 Sum_probs=268.8
Q ss_pred ccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchh---
Q psy10231 40 HAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFT--- 116 (607)
Q Consensus 40 ~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~--- 116 (607)
-.+.+++.+.+++ |+++|+.|.+++.+...+..++..++.|.+.||+|.|++..++.++..+-.+..+++.+++
T Consensus 30 W~l~s~l~~~i~~---~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~ 106 (417)
T COG2223 30 WTLFSPLGVFIKS---DFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTW 106 (417)
T ss_pred HHHHHHHHhhhcc---ccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 3445788888887 9999999999999999999999999999999999999999999999999999999986555
Q ss_pred HHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----h---HHHHHHHhHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----T---WQYTSAACAVVALVG 189 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~---Wr~~f~~~~~~~~~~ 189 (607)
++++.+.+.|++.+.......++++++||+++|.++++.. ..++|..+...++..+ + ||..-.+..+..++.
T Consensus 107 ~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 107 QLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999998887779999999999999999999998 6677776665555544 6 888888877777765
Q ss_pred HHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHH
Q psy10231 190 FAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFV 269 (607)
Q Consensus 190 ~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~ 269 (607)
.++
T Consensus 186 ~v~----------------------------------------------------------------------------- 188 (417)
T COG2223 186 AVL----------------------------------------------------------------------------- 188 (417)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 552
Q ss_pred HHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHH
Q psy10231 270 SLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKV 349 (607)
Q Consensus 270 ~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (607)
.++...|.|....+.++..
T Consensus 189 --------------------------------~~~~~~d~p~~r~~~~~~~----------------------------- 207 (417)
T COG2223 189 --------------------------------AWLGMNDVPEHRASVKPQL----------------------------- 207 (417)
T ss_pred --------------------------------HHHHhCCChhhhccccccc-----------------------------
Confidence 3333334332100000000
Q ss_pred hhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHHHHHHHHHHHHHHHhH
Q psy10231 350 QMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASIIVAGLRFFMAIIGSA 427 (607)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~g~ 427 (607)
....+..+++++.|. +.+.++..+.++..+..+.|.++++ .+.+. +++.......+.+.+.++++|+
T Consensus 208 ------~~~~~~v~~~~~~W~-----lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~ 276 (417)
T COG2223 208 ------PAQLKAVFSNKDTWL-----LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGW 276 (417)
T ss_pred ------hhHHHHHhcCcchHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccch
Confidence 022344566676664 2344445666788899999999975 46644 4567788888889999999999
Q ss_pred hhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhh
Q psy10231 428 CIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGI 507 (607)
Q Consensus 428 l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 507 (607)
++||+|.++.+...+..++++..+++....... ...+........+......+.+. ...+.++...+|. +.|.
T Consensus 277 LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~~-~~G~ 349 (417)
T COG2223 277 LSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG-----HGGSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFPK-ETGA 349 (417)
T ss_pred hhhhccchhHHHHHHHHHHHHHHHHHccccccc-----cCcchHHHHHHHHHHHHHhccCc-chheeechHHHHh-hhhH
Confidence 999999999999888888888877766321110 01222222332333333334443 3445778888875 5699
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhc
Q psy10231 508 MGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 508 ~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+.|+...++.+|++.-|...+...+..| +...|+++..+.+++.+..+..
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 7778888888888888876654
No 64
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=3.6e-25 Score=232.52 Aligned_cols=358 Identities=14% Similarity=0.109 Sum_probs=242.6
Q ss_pred hhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH---H
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII---T 110 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~---a 110 (607)
+..+++.....+.+|.+++ ++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.+++.++++++ +
T Consensus 36 ~~~~~~~~~~~~~~p~i~~---~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~ 112 (438)
T PRK10133 36 FLWAVANNLNDILLPQFQQ---AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA 112 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777778889999988 999999999999999999999999999999999999999999999999999886 5
Q ss_pred hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----------------
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---------------- 173 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---------------- 173 (607)
+++|++.++++|+++|+|.|...+ ...++.|+.++++|.+.++..+..+.+|..+++.++..+
T Consensus 113 ~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l 192 (438)
T PRK10133 113 EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKM 192 (438)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhcc
Confidence 689999999999999999999999 999999987777777789999999999999998887532
Q ss_pred ------hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHH
Q psy10231 174 ------TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYV 247 (607)
Q Consensus 174 ------~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 247 (607)
+||+.+
T Consensus 193 ~~~~~~~w~~~~-------------------------------------------------------------------- 204 (438)
T PRK10133 193 TPEQLSAYKHSL-------------------------------------------------------------------- 204 (438)
T ss_pred ChhhHHHHHHHH--------------------------------------------------------------------
Confidence 111111
Q ss_pred HHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhh-hHHHHHHHH-hhhccccCChHHHHHhCChHHHHHH
Q psy10231 248 YVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAA-CAVVALVGF-AAMHAVPETPSWLARQGCTKEARNS 325 (607)
Q Consensus 248 ~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~-~~i~~~~~~-~~~~~~~esp~~l~~~~~~~~~~~~ 325 (607)
..+||.++.. ..+..++.+ +.....||.+. +++.++
T Consensus 205 ----------------------------------~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~~~---- 242 (438)
T PRK10133 205 ----------------------------------VLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHSDA---- 242 (438)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----cccccc----
Confidence 1246655542 222222222 22333444211 000000
Q ss_pred HHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HH-hCC
Q psy10231 326 LVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFF-ED-AGS 403 (607)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~ 403 (607)
+..+...+.++++++|.++...+..+ + ..........|.+.++ ++ .|.
T Consensus 243 -------------------------~~~~~~~~~~~ll~~~~~~~~~l~~~-~----~~~~~~~~~~~~~~~l~~~~~g~ 292 (438)
T PRK10133 243 -------------------------KQGSFSASLSRLARIRHWRWAVLAQF-C----YVGAQTACWSYLIRYAVEEIPGM 292 (438)
T ss_pred -------------------------cccchhhhHHHHHhCchHHHHHHHHH-H----HHHHHHHHHHHHHHHHhhhcCCC
Confidence 00001123345677776554322221 1 1123344555667664 43 466
Q ss_pred Ccc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHH
Q psy10231 404 SLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVC 482 (607)
Q Consensus 404 ~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (607)
+.. .........++.++++++++++.||+++|+.+..+..+..+.+.+..+ . . .........+.+
T Consensus 293 s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~---~---------~-~~~~~~~~~l~g- 358 (438)
T PRK10133 293 TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF---A---------G-GHVGLIALTLCS- 358 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH---c---------C-ChHHHHHHHHHH-
Confidence 543 566778888899999999999999999999888776665554443322 0 1 111122222223
Q ss_pred HHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHH
Q psy10231 483 ASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLA 550 (607)
Q Consensus 483 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~ 550 (607)
.+.....|..+....|.+|++ .+.+.++.. ...+++.++|.+.|.+.+..| .+..|++.....+..
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 333344677778888888764 577777776 455788999999999999877 566665544443333
No 65
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=4.7e-25 Score=228.50 Aligned_cols=149 Identities=17% Similarity=0.264 Sum_probs=137.1
Q ss_pred ccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHH
Q psy10231 40 HAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLC 119 (607)
Q Consensus 40 ~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~ 119 (607)
..+..+.+|.+.+ ++|+++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++++++|++.++
T Consensus 7 ~~~~~p~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 7 IDMYLPALPVIAA---DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HHHHhccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3445677777777 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 120 VGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 120 ~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
+.|+++|++.+...+ ..+++.|++++++|++++++...+..+|..+++.+++.+ +||+.|++.+++.++..+
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999988776 899999988877766554
No 66
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=1.1e-24 Score=226.81 Aligned_cols=364 Identities=13% Similarity=0.068 Sum_probs=240.9
Q ss_pred HHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH
Q psy10231 31 GKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT 110 (607)
Q Consensus 31 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a 110 (607)
...+..|+..++.++++|.+++ ++|++..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.
T Consensus 10 ~~f~~~G~~~~~~~~l~~~~~~---~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~ 86 (410)
T TIGR00885 10 SLFALWGFANDITNPMVPQFQQ---AFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW 86 (410)
T ss_pred HHHHHHHHHHHhHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 3445668888888899999998 9999999999999999999999999999999999999999999999999998865
Q ss_pred h---ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhhhHHHHHHHhHHHH
Q psy10231 111 V---SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVA 186 (607)
Q Consensus 111 ~---a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f~~~~~~~ 186 (607)
. .+|++.+++.|++.|+|.|...+ ...++.+..|+++|++.+++.+...++|..+++.++..+-
T Consensus 87 ~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~------------ 154 (410)
T TIGR00885 87 PAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI------------ 154 (410)
T ss_pred HHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 4 46899999999999999999999 9999999999999999999999999999999998876430
Q ss_pred HHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhh
Q psy10231 187 LVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGP 266 (607)
Q Consensus 187 ~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~ 266 (607)
....++.......+...
T Consensus 155 ------~~~~~~~~~~~~~~~~~--------------------------------------------------------- 171 (410)
T TIGR00885 155 ------LSNLPHQSQDVLDKLSP--------------------------------------------------------- 171 (410)
T ss_pred ------hcCCccchhhhhhhcCH---------------------------------------------------------
Confidence 00000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhh--ccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 267 VFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAM--HAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 267 ~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~--~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
............+||.++.+.+++.++..+.. ...||.+. ++ +.
T Consensus 172 -----~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~--~~---------------------- 217 (410)
T TIGR00885 172 -----EELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SD--AK---------------------- 217 (410)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc--cc----------------------
Confidence 00001112234467777765555444433332 22343210 00 00
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc---hHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD---DYVASIIVAGLRFFM 421 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~ 421 (607)
+.....+.++.+++|+++...+ ..++... .......|.+.+.++.+.+.+ +............+|
T Consensus 218 -------~~~~~~~~~~~~~~~~~~~~~l-~~f~yvg----~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vG 285 (410)
T TIGR00885 218 -------QISFSASLSRLARIRHYREGVI-AQFFYVG----VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFIS 285 (410)
T ss_pred -------cccchhhHHHHHhChhHHHHHH-HHHHHHH----HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 0000012234566665554222 2222222 233455777887765433222 222344444667899
Q ss_pred HHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccC
Q psy10231 422 AIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFP 501 (607)
Q Consensus 422 ~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 501 (607)
+++++++.||+++|+.+........+..++... .............+ ++.....|..+....+..+
T Consensus 286 R~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-------------~~~~~~~~~l~~~g-lf~s~~fp~i~sl~~~~~g 351 (410)
T TIGR00885 286 RFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-------------AGGHVGLYCLTLCS-AFMSLMFPTIYGIALKGLG 351 (410)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-------------cCChHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Confidence 999999999999999888777776666655544 11122233333333 3334445888899999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh
Q psy10231 502 LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL 534 (607)
Q Consensus 502 ~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~ 534 (607)
++.+..+.++...+ +|+.+.|++.|.+.|..
T Consensus 352 ~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 352 QDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred hhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 88765566655554 99999999999999954
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=6.9e-25 Score=228.34 Aligned_cols=351 Identities=15% Similarity=0.041 Sum_probs=236.8
Q ss_pred ccccccccccccc-cccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccc
Q psy10231 36 NNLTHAIPSILIP-QLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKG 114 (607)
Q Consensus 36 ~~~~~~~~~~~~p-~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~ 114 (607)
..+......+.+| .+.+ ++|.+..+.|++.+.+.++..+.+++.|+++||+|||+++..+.++..++.++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~---~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 22 VVLGFFVVFPLISIRFVD---QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333333333433 3455 88999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHHHHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAVVALVGF 190 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~~~~~~~ 190 (607)
++.+++.|+++|++.+...+ ..+++.|.+|+++|+++.++.....++|..+||.+++.+ +||+.|++.++..++..
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~ 178 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999989 899999999999999999999999999999999999877 89999998877766554
Q ss_pred HHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 191 AAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 191 ~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
+.
T Consensus 179 i~------------------------------------------------------------------------------ 180 (400)
T PRK11646 179 AF------------------------------------------------------------------------------ 180 (400)
T ss_pred HH------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHh
Q psy10231 271 LGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQ 350 (607)
Q Consensus 271 ~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (607)
..+..||.+ +++.++
T Consensus 181 -------------------------------~~~~~~~~~-----~~~~~~----------------------------- 195 (400)
T PRK11646 181 -------------------------------NAWLLPAYK-----LSTVRT----------------------------- 195 (400)
T ss_pred -------------------------------HHHhCCccc-----ccccch-----------------------------
Confidence 112223310 000000
Q ss_pred hcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhh
Q psy10231 351 MAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACI 429 (607)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~ 429 (607)
+...++++.+++++.+......... .........+.|.+.++.+.+. +........++....+....+++.
T Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 267 (400)
T PRK11646 196 ---PVREGMTRVLRDKRFVTYVLTLTGY-----YMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWS 267 (400)
T ss_pred ---hhHHHHHHHHcCchHHHHHHHHHHH-----HHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001233455566544322211111 1112233456788877654432 334444444555554444445555
Q ss_pred -cccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhH
Q psy10231 430 -QMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIM 508 (607)
Q Consensus 430 -d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 508 (607)
||.+.++.+..+..+.+++...++.. +..+........+..+.. ...|...++..|..|++.|+++
T Consensus 268 ~~r~~~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~ 334 (400)
T PRK11646 268 EKRFRLEHRLMAGLLIMSLSMFPIGMV------------SNLQQLFTLICLFYIGSI-IAEPARETLSASLADARARGSY 334 (400)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhh
Confidence 45665666666666666555544331 112222222222333222 2335556788899999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcHHHHHhhh----hHHHHHHHHHHHHHHHHH
Q psy10231 509 GGIVCSLGYLFIFTTVKMYPDLMYLLN----MGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 509 ~g~~~~~~~~~~~i~~~i~~~l~~~~g----~~~~~~~~~~~~~~~~~~ 553 (607)
.|+.+....++..++|.+.|.+.+..+ ....++..+.+++++.+.
T Consensus 335 ~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 335 MGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred hhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999998753 233455545555554444
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=1.1e-24 Score=232.15 Aligned_cols=379 Identities=12% Similarity=0.077 Sum_probs=248.7
Q ss_pred CccccccCcchhHHH--hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-----c
Q psy10231 18 SIISISSDDASWIGK--LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-----G 90 (607)
Q Consensus 18 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-----G 90 (607)
.|++++++++.+... .+..|+..+..+..+|...+ +.|.+..+++.+ +.....+ ++.+++|+++||+ |
T Consensus 4 ~~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~---~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~G 78 (491)
T PRK11010 4 QYLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMT---VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLG 78 (491)
T ss_pred hHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCC
Confidence 355555555433222 23456666667777888777 778898999987 3444444 5899999999999 9
Q ss_pred Cchh-hhhhhhHHHHHHHHHHhc---cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHH
Q psy10231 91 RKTT-VQLTAIPFIIGWTIITVS---KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLI 165 (607)
Q Consensus 91 rr~~-l~~~~~l~~~~~~~~a~a---~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~i 165 (607)
||+. ++.+.+..+++..++++. ++++.+.+.|++.|++.+...+ ..+++.|++|+++|+++.++...+..+|.++
T Consensus 79 rrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 79 RRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 9986 667777777887777775 4688999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhhhh-----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcc
Q psy10231 166 VYSLGYIV-----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIG 240 (607)
Q Consensus 166 g~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 240 (607)
++.++..+ |||..|++.++..++..+..+
T Consensus 159 g~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~---------------------------------------------- 192 (491)
T PRK11010 159 SGGLALWLADRYLGWQGMYWLMAALLIPCIIATL---------------------------------------------- 192 (491)
T ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 98776654 799999998877666554222
Q ss_pred hhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChH
Q psy10231 241 MSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTK 320 (607)
Q Consensus 241 ~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~ 320 (607)
++||+++.. ++.+
T Consensus 193 ----------------------------------------------------------------~~~e~~~~~---~~~~ 205 (491)
T PRK11010 193 ----------------------------------------------------------------LAPEPTDTI---PVPK 205 (491)
T ss_pred ----------------------------------------------------------------hcCCCcccc---cccc
Confidence 234432110 0000
Q ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-H
Q psy10231 321 EARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFF-E 399 (607)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 399 (607)
+.+ +....++++.+++++.+......+ +.. .+......+.+.++ +
T Consensus 206 ~~~-----------------------------~~~~~~l~~~~~~~~~~~~ll~~~-l~~----~~~~~~~~~~~~~l~~ 251 (491)
T PRK11010 206 TLE-----------------------------QAVVAPLRDFFGRNNAWLILLLIV-LYK----LGDAFAMSLTTTFLIR 251 (491)
T ss_pred chh-----------------------------hhHHHHHHHHHcCcCHHHHHHHHH-HHH----HHHHHHHHHHHHHHHH
Confidence 000 000012334555554443222222 111 11233344555555 4
Q ss_pred HhCCCcch-HHHH-HHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHH
Q psy10231 400 DAGSSLDD-YVAS-IIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACI 477 (607)
Q Consensus 400 ~~g~~~~~-~~~~-~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (607)
+.|.+... .... ....++.+++.+++|++.||+++|+.+..+.++.++..+.+...... ..+.+......
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~--------~~~~~~l~~~~ 323 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT--------DKNLYSMGAAV 323 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------cccHHHHHHHH
Confidence 45765543 3333 34456888999999999999999887776555544443322211100 01112222122
Q ss_pred HHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 478 LANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
.+.....+.+. +..+++..+..|++.+++..|+.+....++..+++.+.|.+.+..||...|.+.+++++.+.+.....
T Consensus 324 ~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 22122222222 33457778889999999999999999999999999999999999999888888777777776665443
No 69
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=2.9e-25 Score=230.71 Aligned_cols=357 Identities=11% Similarity=0.022 Sum_probs=244.7
Q ss_pred hhhccccccccccccc-cccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh
Q psy10231 33 LHCNNLTHAIPSILIP-QLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p-~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~ 111 (607)
.++.....+...+.+| .+.+ ++|.+..+.|++.+.+.++..+++++.|+++||+|||++++++.++..++.++.++
T Consensus 16 ~~~~~~g~~~~~~~l~~~l~~---~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 16 SLLLTIGRGATLPFMTIYLSR---QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3444444444444444 4555 89999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHHHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAVVAL 187 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~~~~ 187 (607)
++|++.++++|++.|.+.+...+ ..++..|..++++|+++.++.....++|..++|.+++.+ +||..|++.++..+
T Consensus 93 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~ 172 (395)
T PRK10054 93 VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSA 172 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 99999999999999998888888 999999999999999999999999999999999999887 89999998777766
Q ss_pred HHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhH
Q psy10231 188 VGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPV 267 (607)
Q Consensus 188 ~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~ 267 (607)
+..+.
T Consensus 173 i~~i~--------------------------------------------------------------------------- 177 (395)
T PRK10054 173 FPLVF--------------------------------------------------------------------------- 177 (395)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 55441
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHH
Q psy10231 268 FVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSL 347 (607)
Q Consensus 268 ~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (607)
..+.+||.++ +++ ++.+
T Consensus 178 ----------------------------------~~~~~~~~~~----~~~-~~~~------------------------ 194 (395)
T PRK10054 178 ----------------------------------IQIWVQRSEK----AIA-TETG------------------------ 194 (395)
T ss_pred ----------------------------------HHHHHhcccc----ccc-cchh------------------------
Confidence 1222232210 000 0000
Q ss_pred HHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh---CCCcc-hHHHHHHHHHHHHHHHH
Q psy10231 348 KVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA---GSSLD-DYVASIIVAGLRFFMAI 423 (607)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~ 423 (607)
...+.++.+++++.+......++.... ......+.+.+.... +.+.+ .................
T Consensus 195 -------~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 262 (395)
T PRK10054 195 -------SVWSPSVLLQDKALLWFTCSGFLASFV-----SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQY 262 (395)
T ss_pred -------hhhhhhhhccCceehHHHHHHHHHHHH-----HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehh
Confidence 000113456677665533332222221 122223444444322 22222 23344444444555667
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
..+++.||.++|+.+..+..+..++...+.... +..+........+..+. ....|....++.+..|++
T Consensus 263 ~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~-~~~~p~~~~~~~~~~p~~ 330 (395)
T PRK10054 263 SVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG-----------NSLLLWGMSAAVFTVGE-IIYAPGEYMLIDHIAPPG 330 (395)
T ss_pred HHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc-----------hHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHhCCcc
Confidence 888999999999988887766666665554310 11222222333333332 223455567788999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 504 VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 504 ~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
.|+++.+..+ ..++|..++|.+.|.+.|..|+...+++.+.+..++.++..
T Consensus 331 ~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 331 MKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred cceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 9999988654 67799999999999999999888777776666666555543
No 70
>KOG2533|consensus
Probab=99.94 E-value=1.4e-25 Score=233.18 Aligned_cols=362 Identities=14% Similarity=0.106 Sum_probs=242.0
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRF 123 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~ 123 (607)
+...+.+....+|.+...++.+++.++++++++++.+++|.+.||++-.+.+....+.+++.+++.+..+|++.+++.|+
T Consensus 63 si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~ 142 (495)
T KOG2533|consen 63 SIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRF 142 (495)
T ss_pred cchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 44555555555599999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred HHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----------hHHHHHHHhHHHHHHHHHH
Q psy10231 124 ITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----------TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 124 l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----------~Wr~~f~~~~~~~~~~~~~ 192 (607)
+.|+.++..+| ...+++.|+.+++|+..++++....++|.++|++++..+ ||||.|++.++++++..+.
T Consensus 143 llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 99999999999 999999999999999999999999999999999998873 9999999999998887763
Q ss_pred HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHH
Q psy10231 193 MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLG 272 (607)
Q Consensus 193 ~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g 272 (607)
T Consensus 223 -------------------------------------------------------------------------------- 222 (495)
T KOG2533|consen 223 -------------------------------------------------------------------------------- 222 (495)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChH--HHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHh
Q psy10231 273 VLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPS--WLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQ 350 (607)
Q Consensus 273 ~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~--~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (607)
.++++|+.|. |..++ +|..-..++.++.+....
T Consensus 223 -----------------------------~f~~lp~~P~~~~fl~~---~ek~~~~~~~~~~~~~~~------------- 257 (495)
T KOG2533|consen 223 -----------------------------VFFFLPDNPSKAWFLTD---EEKELVVERLRESPSGGI------------- 257 (495)
T ss_pred -----------------------------EEEEecCChhhccccch---HHHHHHHHHHHhccCCCc-------------
Confidence 4444555543 11111 011111111111110000
Q ss_pred hcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCC-cchHHHHHHHHHHHHHHHHHHhHh
Q psy10231 351 MAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSS-LDDYVASIIVAGLRFFMAIIGSAC 428 (607)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~g~l 428 (607)
.++.+...+++.+++|..|.-. ++.++.....+.+.+|+|.++++ .+++ .++.....+..++++++.+++|++
T Consensus 258 ~~~~~~~~~~~a~~dp~vw~~~-----l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~l 332 (495)
T KOG2533|consen 258 ENKFKWKGFKEALKDPGVWPFS-----LCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYL 332 (495)
T ss_pred ccccCHHHHHHHHhchhHHHHH-----HHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHH
Confidence 0113456778889998766533 22333333467899999999987 3453 346778889999999999999999
Q ss_pred hcc----cCCchhHHHhhHHHHHHH-HHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 429 IQM----FSRRALATTSAFFMALSM-GISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 429 ~d~----~grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
+|| ..+|........+..+.. +.+.. ..........+..+........+.......+....+
T Consensus 333 sdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~ 399 (495)
T KOG2533|consen 333 SDRLKTIFARRLLFIVFLCLYAIIGAISLLA-------------AAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGN 399 (495)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh-------------hccchHHhHHHHhcchhhHHHHHHHHhhccccccch
Confidence 999 445544444333333222 22222 111111111111111112222334445556655554
Q ss_pred chh-hHHHHHHHHHHHHHHHHhhhcHHHHH-hhhhHHHHHHHHHHHH
Q psy10231 504 VRG-IMGGIVCSLGYLFIFTTVKMYPDLMY-LLNMGGMMWAFSCACL 548 (607)
Q Consensus 504 ~r~-~~~g~~~~~~~~~~~i~~~i~~~l~~-~~g~~~~~~~~~~~~~ 548 (607)
.|. +..+......+.++.+++.+...... ..++...|......++
T Consensus 400 ~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~~~ 446 (495)
T KOG2533|consen 400 TKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAACV 446 (495)
T ss_pred HHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHHHH
Confidence 444 34444444445566666655544333 3466666644444333
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=1.7e-24 Score=222.42 Aligned_cols=325 Identities=14% Similarity=0.133 Sum_probs=227.3
Q ss_pred cccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHH
Q psy10231 41 AIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCV 120 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~ 120 (607)
...++.+|.+.+ ++|.|..+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+++
T Consensus 17 ~~~~~~lp~l~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 17 TSVGPLLPQIRS---ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred ccCcccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 445678888888 999999999999999999999999999999999999999999999988888887 7899999999
Q ss_pred HHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh------hHHHHHHHhHHHHHHHHHHH
Q psy10231 121 GRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV------TWQYTSAACAVVALVGFAAM 193 (607)
Q Consensus 121 ~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------~Wr~~f~~~~~~~~~~~~~~ 193 (607)
.|++.|++.+...+ ...++.|+++ ++|+++.++...+.++|..+++.++..+ +||+.|.+.++..++...
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--
Confidence 99999999999888 8888899885 6899999999999999999988877655 388888766554333221
Q ss_pred hcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHH
Q psy10231 194 HAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGV 273 (607)
Q Consensus 194 ~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~ 273 (607)
T Consensus 170 -------------------------------------------------------------------------------- 169 (355)
T TIGR00896 170 -------------------------------------------------------------------------------- 169 (355)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcC
Q psy10231 274 LIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAG 353 (607)
Q Consensus 274 ~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (607)
.++||.++ +.++ + ++
T Consensus 170 ------------------------------~~~~~~~~------~~~~-----------~------------------~~ 184 (355)
T TIGR00896 170 ------------------------------AWIPQVRR------RVAA-----------N------------------QT 184 (355)
T ss_pred ------------------------------HHhhhhcc------ccCC-----------C------------------CC
Confidence 11122110 0000 0 00
Q ss_pred CccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhccc
Q psy10231 354 SSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMF 432 (607)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~ 432 (607)
......++.+|++..+...+. .+......+....|.|.++++.|.+.. .........++.++++++.+++.||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~ 259 (355)
T TIGR00896 185 TTRLTPVRIWRSPLAWQVTVF-----FGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRV 259 (355)
T ss_pred CCCCCCchhhcCHhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Confidence 001123345566544432211 112222345667788999887776543 45677778889999999999999999
Q ss_pred C-CchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcc-ccCccchhhHHH
Q psy10231 433 S-RRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAE-LFPLSVRGIMGG 510 (607)
Q Consensus 433 g-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~r~~~~g 510 (607)
+ ||+.+..+..+.+++.+.+.+. ....... ...+++.+. ....+.......+ ..+++.++...+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~l~g~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~ 325 (355)
T TIGR00896 260 KDQRGIVAVLAVLQLVGLCGLLFA------------PMHGLWA-WALVLGLGQ-GGAFPLALTLIGLRSRQAAQAAALSA 325 (355)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHh------------hhhHHHH-HHHHHHHhh-hhHhHHHHHHHHHhccCHHHHHHHHH
Confidence 4 5666666666666655544431 0111111 222222222 2223443344443 344567789999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 511 IVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 511 ~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
+.+.+++++..++|.+.|.+.|+.|.
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998763
No 72
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=1.6e-23 Score=220.15 Aligned_cols=384 Identities=14% Similarity=0.134 Sum_probs=242.5
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGR 122 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R 122 (607)
.+..++.+.. |+|- +.+..|+.+...++.+++.++.|+++|.||||.+++.+.++..+|+++++.++|...++.+-
T Consensus 63 ~a~~l~~I~~---diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~ 138 (599)
T PF06609_consen 63 PASILPYINA---DIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGM 138 (599)
T ss_pred cHHHHHHHHH---hcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHH
Confidence 3556677776 7765 47889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH--hcC
Q psy10231 123 FITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM--HAV 196 (607)
Q Consensus 123 ~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~--~~~ 196 (607)
.+.|+|.|........++|..|.|.|....++...........++.++..+ +|||.|++.++...+.+++. +.-
T Consensus 139 ~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 139 VLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred HHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 999999877777666689999999998887777766666666677777665 89999999998877765543 334
Q ss_pred CCChhhHhhcc-ccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHH
Q psy10231 197 PETPSWLARQG-MAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLI 275 (607)
Q Consensus 197 pes~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~ 275 (607)
|++.+.++.++ ++.+.++ -.++.+.+...+.+.
T Consensus 219 PP~~~~~~~~~~s~~~~l~----------------------------------------------~lD~IG~~L~~~Gl~ 252 (599)
T PF06609_consen 219 PPPRAQLHGRKLSKREQLK----------------------------------------------ELDWIGIFLFIAGLA 252 (599)
T ss_pred CCchhhhccccCcHHHHHH----------------------------------------------HhhHHHHHHHHHHHH
Confidence 54432221111 1111111 112233333333333
Q ss_pred HHHH----HHH--HhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHH
Q psy10231 276 VYSL----GYI--VTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKV 349 (607)
Q Consensus 276 ~~~~----~~~--~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (607)
..++ +.. ..|+.+-+++.+..-+.++..+.+.|.- ..
T Consensus 253 LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~--~~----------------------------------- 295 (599)
T PF06609_consen 253 LFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF--GA----------------------------------- 295 (599)
T ss_pred HHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh--cc-----------------------------------
Confidence 3333 222 2588888877666665555655655520 00
Q ss_pred hhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCc----chHHHHHHHHHHHHHHHHH
Q psy10231 350 QMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSL----DDYVASIIVAGLRFFMAII 424 (607)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~----~~~~~~~~~~~~~~~~~~~ 424 (607)
.+...-..++|++++.....+ +..+.....++....+.|+..... +.+. .........+++..++.++
T Consensus 296 ---~~~Pl~P~~Lf~~~r~~~~~l----vi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i 368 (599)
T PF06609_consen 296 ---PKDPLFPHRLFKDRRGFAALL----VISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVI 368 (599)
T ss_pred ---CCCCcCCHHHhccchHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHH
Confidence 001112234565543222222 222222222444445555544332 2222 2345666777888888888
Q ss_pred HhHhhcccCCchh-HHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 425 GSACIQMFSRRAL-ATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 425 ~g~l~d~~grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
.+.+..+++|-|. ++.+..++.+.+..++.. +.++... .+....+.+.+.+... ......+.-..|++
T Consensus 369 ~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~---------~~~n~~~-~i~~~~l~g~giG~~~-~~~~~~~ql~~p~~ 437 (599)
T PF06609_consen 369 LGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV---------RPDNKNA-AIAFLVLAGFGIGGIL-VPAIVIAQLIVPDE 437 (599)
T ss_pred HHHHHHHccchhHHHHHHHHHHHHHHHHHHHc---------cCCCcch-HHHHHHHHHHhHHHHH-HHHHHeeEeeeCch
Confidence 9999988887544 456655555544444331 1112222 2222222222222222 22335556678999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcHHHH
Q psy10231 504 VRGIMGGIVCSLGYLFIFTTVKMYPDLM 531 (607)
Q Consensus 504 ~r~~~~g~~~~~~~~~~~i~~~i~~~l~ 531 (607)
.-+++.|+..+++.+|+.++..++..+.
T Consensus 438 ~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 438 DIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999999999999999988876544
No 73
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=1e-23 Score=219.33 Aligned_cols=362 Identities=12% Similarity=0.058 Sum_probs=227.6
Q ss_pred hhHHHhhhcccccccccccccc-ccCCCcccccCccchhHHHHHHHH-HhhHhhhHHHHhhhhhcCchhh-hhhhhHHHH
Q psy10231 28 SWIGKLHCNNLTHAIPSILIPQ-LQKPSSIISISSDDASWIASLGVI-STPVGSLFAGIFMDLLGRKTTV-QLTAIPFII 104 (607)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~~~s~~~~~~i~s~~~l-~~~i~~~~~g~l~Dr~Grr~~l-~~~~~l~~~ 104 (607)
..+...++.++......+.+|. +.+ ++|.+.++.|++.+...+ +..++.++.++ +||+||||.+ +.+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~---~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTD---EVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHH
Confidence 3344456667776666666665 455 899999999999876655 66666655666 9999999875 456666678
Q ss_pred HHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCcc--ccccchhhHHHHHHHHHHHHHhhhh----hHHH
Q psy10231 105 GWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDR--GYLSAFGPVFVSLGVLIVYSLGYIV----TWQY 177 (607)
Q Consensus 105 ~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~ 177 (607)
+..+.+++++++.+++.+.+.|...+...+ ...++.|+.++++| +...+..+.+.++|.++||.+++.+ |||.
T Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~ 174 (393)
T PRK15011 95 ACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTV 174 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHH
Confidence 888888999999987776655555567777 88888888776655 3445778888899999999998777 9999
Q ss_pred HHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCC
Q psy10231 178 TSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPND 257 (607)
Q Consensus 178 ~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~ 257 (607)
.|++.++..++..+.
T Consensus 175 ~f~~~~~~~~~~~~~----------------------------------------------------------------- 189 (393)
T PRK15011 175 MYLSAAVAFIVCGVM----------------------------------------------------------------- 189 (393)
T ss_pred HHHHHHHHHHHHHHH-----------------------------------------------------------------
Confidence 999988777665542
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhh
Q psy10231 258 RGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVAD 337 (607)
Q Consensus 258 r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~ 337 (607)
..+++||.++. ++ ++.. +
T Consensus 190 --------------------------------------------~~~~~~~~~~~---~~--~~~~---------~---- 207 (393)
T PRK15011 190 --------------------------------------------VWLFLPSMRKE---LP--LATG---------T---- 207 (393)
T ss_pred --------------------------------------------HHhhcCccCCC---Cc--cccc---------c----
Confidence 23333443210 00 0000 0
Q ss_pred hHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHH
Q psy10231 338 AELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVA 415 (607)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~ 415 (607)
. +. ..++++.....+..... ..........+.|.++++ .+.+.. .........
T Consensus 208 ---------------~---~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~ 262 (393)
T PRK15011 208 ---------------L---EA---PRRNRRDTLLLFVICTL----MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAA 262 (393)
T ss_pred ---------------c---cc---cccccccHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 0 00 00111111111111111 112234455677877754 466543 344445555
Q ss_pred HHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhh
Q psy10231 416 GLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVM 495 (607)
Q Consensus 416 ~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (607)
+..+++.++.|+++||++||+.+..+.....+....+.. . +..+..+....+.....+.. .+....+
T Consensus 263 ~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~l~~~~l~~~~~g~~-~~~~~~~ 329 (393)
T PRK15011 263 GLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM---A---------HSPAILLGLQLLNAIYIGIL-GGIGMLY 329 (393)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---H---------hhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 667788999999999999998776655444333222211 0 11122222222111121111 1223466
Q ss_pred hccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccC
Q psy10231 496 IAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPE 560 (607)
Q Consensus 496 ~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (607)
..|.+|++ |+++.++.+...++|..+++.+.|.+.+..|+...+++.+++++++.+..+ ..||
T Consensus 330 ~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 392 (393)
T PRK15011 330 FQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL-RIKD 392 (393)
T ss_pred HHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hhcC
Confidence 78888864 899999999999999999999999999988998888777766666655544 3354
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=5.5e-24 Score=222.49 Aligned_cols=365 Identities=10% Similarity=0.027 Sum_probs=236.3
Q ss_pred hhcccccccc-ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcC-chhhhhhhhHHHHHHHHHHh
Q psy10231 34 HCNNLTHAIP-SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGR-KTTVQLTAIPFIIGWTIITV 111 (607)
Q Consensus 34 ~~~~~~~~~~-~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Gr-r~~l~~~~~l~~~~~~~~a~ 111 (607)
++.-...+.. .++.+.+.+ ++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+
T Consensus 12 ~~~~~~~~~~~~~l~~~l~~---~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 12 FLQWFIWGSWLVTLGSYMSK---TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444 455556666 899999999999999999999999999999999965 77888889998899999999
Q ss_pred ccchhHHHHHHHHHhhhhhhHhh-hHhHHh--------hccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHH
Q psy10231 112 SKGFTLLCVGRFITGMAIGMSSA-CYVYVA--------EICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYT 178 (607)
Q Consensus 112 a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~--------e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~ 178 (607)
.+|++.+.+.|++.|++.+...+ ..++.. |......|.+..+. +|..+++.+++.+ .|+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~~~~~~- 161 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIELSNIQ- 161 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcccchhHH-
Confidence 99999999999999998877766 555432 22333345555552 4555556555554 3443
Q ss_pred HHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCc
Q psy10231 179 SAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDR 258 (607)
Q Consensus 179 f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r 258 (607)
|++.++..++..++.+
T Consensus 162 f~~~~~~~~~~~~~~~---------------------------------------------------------------- 177 (418)
T TIGR00889 162 LYITAGSSALLGVFAL---------------------------------------------------------------- 177 (418)
T ss_pred HHHHHHHHHHHHHHHh----------------------------------------------------------------
Confidence 4455554444444222
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhh
Q psy10231 259 GYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADA 338 (607)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 338 (607)
.+||+|+- ++++..+.+
T Consensus 178 ----------------------------------------------~~~e~~~~--~~~~~~~~~--------------- 194 (418)
T TIGR00889 178 ----------------------------------------------TLPDIPVA--KSTAKMSIK--------------- 194 (418)
T ss_pred ----------------------------------------------cCCCCCCC--ccccccCHH---------------
Confidence 34443310 000000000
Q ss_pred HHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc---------chHH
Q psy10231 339 ELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL---------DDYV 409 (607)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~ 409 (607)
+. ...+.++.+|+|+++..++..++... .......+.+.++++.+.+. ....
T Consensus 195 -------------~~-~~~~~~~~~k~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~ 255 (418)
T TIGR00889 195 -------------VM-LGLDAFILFKNKRMAIFFFFSMLLGA-----PLQITNIFGNGFLHEFGRNPEFADSFVVKNASI 255 (418)
T ss_pred -------------HH-hhhhHHHHhcCCCeeeHHHHHHHHHh-----HHHHHHHhHHHHHHHhcccccccchhhhhhHHH
Confidence 00 00122345667766543333222222 12233455566666655321 2355
Q ss_pred HHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCC-hHHHHHHHHHHHHHHhcc
Q psy10231 410 ASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLN-WIPLACILANVCASMLGM 488 (607)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 488 (607)
...+..+..+++.+..+++.||+|+|+.+..+.++..+...++.... ..... +......++.+...+ ..
T Consensus 256 ~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~---------~~~~~~~~l~l~~~l~g~~~~-~~ 325 (418)
T TIGR00889 256 WMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD---------PEYFGYALLFLSMIVYGCAFD-FF 325 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC---------cchhhHHHHHHHHHHHHHHHH-HH
Confidence 66667778888999999999999999999988887777665554310 00111 112222222332222 22
Q ss_pred chhhhhhhccccCccchhhHHHHHH-HHHHHHHHHHhhhcHHHHHhh------hhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 489 LQLPWVMIAELFPLSVRGIMGGIVC-SLGYLFIFTTVKMYPDLMYLL------NMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 489 ~~~~~~~~~e~~p~~~r~~~~g~~~-~~~~~~~~i~~~i~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.+....++.|.+|++.|+++.|+.+ ....+|..++|.+.|.+.+.. ||+..|.+.+++.++++++.++++||+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3444578899999999999999997 567899999999999999984 477788888888888888888888876
Q ss_pred CCC
Q psy10231 562 QGK 564 (607)
Q Consensus 562 ~~~ 564 (607)
++.
T Consensus 406 ~~~ 408 (418)
T TIGR00889 406 HNA 408 (418)
T ss_pred ccC
Confidence 543
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.4e-23 Score=217.50 Aligned_cols=350 Identities=12% Similarity=-0.020 Sum_probs=242.6
Q ss_pred hhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhh----hhhhhHHHHHHHHH
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTV----QLTAIPFIIGWTII 109 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l----~~~~~l~~~~~~~~ 109 (607)
+...+..+...+.+|.+.+ ++|.|..++|++.+++.++..++++++|+++||+|||+.. ..+..+..+ ..+
T Consensus 14 ~~~~~~~~~~~p~l~~~l~---~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~ 88 (382)
T TIGR00902 14 FGYFCAYGIFLPFFPAWLK---GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHH
Confidence 3344455666777777777 9999999999999999999999999999999999985433 222222222 344
Q ss_pred HhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHH
Q psy10231 110 TVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAV 184 (607)
Q Consensus 110 a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~ 184 (607)
..+++++.+++.|+++|.+.+...| ..++..|+ +++|++..+....+.++|.++++.+++.+ |||..|++..+
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 5788999999999999999988888 88887664 57889999999999999999999988877 99999887654
Q ss_pred HHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 185 VALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 185 ~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
..++..+
T Consensus 167 ~~~~~~~------------------------------------------------------------------------- 173 (382)
T TIGR00902 167 GLAFMLI------------------------------------------------------------------------- 173 (382)
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 4222222
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
.....|+.++ +++ ++.
T Consensus 174 -------------------------------------~~~~~~~~~~----~~~-~~~---------------------- 189 (382)
T TIGR00902 174 -------------------------------------GFLIKPTIPP----KDA-IPE---------------------- 189 (382)
T ss_pred -------------------------------------HHHcCCCCCC----Ccc-ccc----------------------
Confidence 1111121110 000 000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAI 423 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 423 (607)
++.+..++.++.+|+|+++...+..++ ..........+.|.++++.|.+.. .+.......+..+++..
T Consensus 190 ------~~~~~~~~~~~~l~~~~~~~~l~~~~l-----~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~ 258 (382)
T TIGR00902 190 ------DESQGDSAFIALLKNPMNLRFLAAVCL-----IQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFA 258 (382)
T ss_pred ------cccccchhHHHHHcChHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHH
Confidence 000111234566777765543322222 222355666788888888777554 45556667778888899
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS 503 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 503 (607)
+.+++.||+|+|+.+..+.+...+....++.. +..+..+....+.+..++.. .+....++.+. |++
T Consensus 259 ~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~q~l~g~~~~~~-~~~~~~~i~~~-~~~ 324 (382)
T TIGR00902 259 FSNKLFQNCSARDLLLISAIACVGRWAIIGAI------------EAFPLIFLLQILHCGTFAVC-HLAAMRYIAAQ-PGS 324 (382)
T ss_pred HhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH------------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC-CHh
Confidence 99999999999999998888888887766541 22233333444444444443 34455778887 999
Q ss_pred chhhHHHHHHH-HHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 504 VRGIMGGIVCS-LGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 504 ~r~~~~g~~~~-~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
.|++++++.+. ...+|..+++.+.|.+.|..|. ..|+..+.+++++.++
T Consensus 325 ~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 325 EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999864 5568999999999999999986 5677777777765444
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.92 E-value=3.7e-24 Score=220.88 Aligned_cols=331 Identities=15% Similarity=0.133 Sum_probs=214.2
Q ss_pred ccccccccccc-ccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc-chh
Q psy10231 39 THAIPSILIPQ-LQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK-GFT 116 (607)
Q Consensus 39 ~~~~~~~~~p~-l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~-~~~ 116 (607)
+.....+..|. +++ ++|+|+.+.+++.+.+.+++.+++++.|+++||+|||++++++.++..++.+++++++ +++
T Consensus 16 ~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (366)
T TIGR00886 16 VWFAFSPLAVQMIKD---DLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYS 92 (366)
T ss_pred HHHHhHHhhhHHHHH---HhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 44455677784 777 9999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh--------------hHHHHHH-H
Q psy10231 117 LLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV--------------TWQYTSA-A 181 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l--------------~Wr~~f~-~ 181 (607)
.+++.|+++|++.+...+...++.|++|+++|+++.++.....++|..+++.++..+ +||+.|+ .
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~ 172 (366)
T TIGR00886 93 VLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIV 172 (366)
T ss_pred HHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHH
Confidence 999999999999665433889999999999999999999866666666665554322 4787773 3
Q ss_pred hHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 182 CAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 182 ~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
.++...+..++
T Consensus 173 ~~~~~~~~~~~--------------------------------------------------------------------- 183 (366)
T TIGR00886 173 PAGILLLPALL--------------------------------------------------------------------- 183 (366)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 34333332221
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
.....+|+|+. +.++.+...+ +.....
T Consensus 184 ----------------------------------------~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~----- 210 (366)
T TIGR00886 184 ----------------------------------------IFFVGADTPPG-----KPATGKLSFK---GARWSV----- 210 (366)
T ss_pred ----------------------------------------HHHhcccCCcc-----cccchhcccc---cccccc-----
Confidence 22223333210 0000000000 000000
Q ss_pred HHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRF 419 (607)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~ 419 (607)
.+...+..++.+++++.+...+. . +......+....+.|.++++ .|.+.. ......+..+.++
T Consensus 211 ----------~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 275 (366)
T TIGR00886 211 ----------GTGALGDQLKVFRDRHTWILALL-Y----SVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGS 275 (366)
T ss_pred ----------cchhHHHHHHHHhccchhhHHHH-H----HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 00001133456666654432221 1 12222345667777888865 366443 4556667778888
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++.++.+++.||+|+|+.+..+......+..++..... ++...+........+....+.+ .+..+.++.|.
T Consensus 276 ~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~ 346 (366)
T TIGR00886 276 LARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV--------SPLSLAVFIVLFVALFFFSGAG-NGSTFALVPHI 346 (366)
T ss_pred HHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC--------CcchHHHHHHHHHHHHHHhccc-cchhhhcchhh
Confidence 99999999999999988777666555555444433110 0002222222233333333333 34456778888
Q ss_pred cCccchhhHHHHHHHHHHHH
Q psy10231 500 FPLSVRGIMGGIVCSLGYLF 519 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~ 519 (607)
.| +.+|++.|+.+.++++|
T Consensus 347 ~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 347 FR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred ch-hhcccHHHHHHHhccCC
Confidence 87 57899999999888765
No 77
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=2.3e-23 Score=220.58 Aligned_cols=463 Identities=13% Similarity=0.035 Sum_probs=259.9
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc------cchhH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS------KGFTL 117 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a------~~~~~ 117 (607)
+...|.+++ ++|+|..|.+++.+.. .....++++.|++.||+|||++++++.+++.++.++++++ ++++.
T Consensus 47 sv~s~~L~~---~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~ 122 (591)
T PTZ00207 47 NLISGAMQA---RYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR 122 (591)
T ss_pred HHHHHHHHH---HhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH
Confidence 456678888 9999999999999874 4455678889999999999999999999999999999998 68999
Q ss_pred HHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHH-HHHHhhhh--hHHHHHHHhHHHHHHHHHHH
Q psy10231 118 LCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLI-VYSLGYIV--TWQYTSAACAVVALVGFAAM 193 (607)
Q Consensus 118 l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~i-g~~l~~~l--~Wr~~f~~~~~~~~~~~~~~ 193 (607)
+++.|+++|+|.+...+ +...+.+++| ++||++.++...+.++|..+ +++...++ +|+..|++.+++.++..++.
T Consensus 123 l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999986 78999999999999999975 55555555 89999999888877765543
Q ss_pred -hc--CCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 194 -HA--VPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 194 -~~--~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
++ .|+.+++..++++.+++.+..++.-+...+.+ .+| .|.+......+...
T Consensus 202 ~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q-------------------------~~p-~~~f~~~~~i~~~l 255 (591)
T PTZ00207 202 IVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQ-------------------------KAP-MWRFVYGFVILIIL 255 (591)
T ss_pred HhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhc-------------------------CCC-ceehhhHHHHHHHH
Confidence 33 46666665444433444333222111111111 111 11121111111111
Q ss_pred HHHH-HHHHHHHH----HhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 271 LGVL-IVYSLGYI----VTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 271 ~g~~-~~~~~~~~----~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
...+ +...+... ..-+..+....+..++.+ ....+|- +++..+.+.++. +. ++.... +.+.+..+.+.
T Consensus 256 ~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~-p~l~ip~--~~~~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~ 328 (591)
T PTZ00207 256 IVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIF-PFMAFPL--TTFDGKRPHDDS-DG-KAKEHV--EAGEEVSAAED 328 (591)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HHHhhhH--HHhccCCcCCCc-cc-cccccc--ccccccccccc
Confidence 1111 11111110 122222222111111111 1011111 111111000000 00 000000 00000000000
Q ss_pred H--HH-Hh-hcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-CCCcch--HH-HHHHHHHH
Q psy10231 346 S--LK-VQ-MAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA-GSSLDD--YV-ASIIVAGL 417 (607)
Q Consensus 346 ~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~--~~-~~~~~~~~ 417 (607)
+ .. .+ .......++.+.+++.++|..+ ...++.......+...+.++.+.+ |.+.+. .. ...+.++.
T Consensus 329 ~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~-----~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~ 403 (591)
T PTZ00207 329 KVVETDVDYIAPQFQETFIEGLKTARLWCLL-----WSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVG 403 (591)
T ss_pred ccccccccCCCCCCcchHHHHHhchhHHHHH-----HHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHH
Confidence 0 00 00 1112223778888877766422 222333333455566677777777 663322 22 67888999
Q ss_pred HHHHHHHHhHhhcccCC--------chhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccc
Q psy10231 418 RFFMAIIGSACIQMFSR--------RALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGML 489 (607)
Q Consensus 418 ~~~~~~~~g~l~d~~gr--------r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (607)
+.+|.+..|++.....+ |+..+....++.++.+++.+. .+.....+..++.+...+..+
T Consensus 404 ~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~------------~p~~~L~~~~~lvg~~~G~~~- 470 (591)
T PTZ00207 404 SAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT------------LPKAALPLPYFIAAFANGFMA- 470 (591)
T ss_pred HHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH------------CCccHhHHHHHHHHHHhhHhH-
Confidence 99999999987722111 122222222244444444331 111233333444444444443
Q ss_pred hhhhhhhccccCccchhhHHHHHHHHHHHHHHHH-hhhcHHHHHhh-------------hhHHHHHHHHHHHHHHHHHhh
Q psy10231 490 QLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTT-VKMYPDLMYLL-------------NMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 490 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~-~~i~~~l~~~~-------------g~~~~~~~~~~~~~~~~~~~~ 555 (607)
++....+.|+|. +.-|+-.-+.....-+|+.+- ..+.|.+.|.- .+..+|.+.+++++++.+...
T Consensus 471 ~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 471 ATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 455588999999 666666655555555666555 34566666542 245589999999999888876
Q ss_pred hcccCCCC
Q psy10231 556 AFLPETQG 563 (607)
Q Consensus 556 ~~~~~~~~ 563 (607)
...-++|+
T Consensus 550 ~l~~R~r~ 557 (591)
T PTZ00207 550 YVHLQYRR 557 (591)
T ss_pred heeeehHH
Confidence 66555554
No 78
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=2.8e-23 Score=218.25 Aligned_cols=366 Identities=14% Similarity=0.064 Sum_probs=221.3
Q ss_pred hccccccccccccccc-cCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH---
Q psy10231 35 CNNLTHAIPSILIPQL-QKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT--- 110 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l-~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a--- 110 (607)
+..+..+...+.+|.. .+ ++|.+..+.|++.+.+.++..+++++.|+++||+|||++++++..+..++.....
T Consensus 21 ~~~~~~~~~~~~~~~~l~~---~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 21 FFFFIWSSWFSFFPIWLHD---INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444433 34 6899999999999999999999999999999999999999887666554433221
Q ss_pred hccc-----hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHH
Q psy10231 111 VSKG-----FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAA 181 (607)
Q Consensus 111 ~a~~-----~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~ 181 (607)
.++. ....++++++.|.+.....+ ...+..+ . .+++++..+......++|..+++.+++.+ +|++.|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~ 175 (420)
T PRK09528 98 FAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWL 175 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHH
Confidence 1111 11122333434433333333 2222222 2 34567788888888899999999888877 89999988
Q ss_pred hHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 182 CAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 182 ~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
.+++.++..+..
T Consensus 176 ~~~~~~~~~~~~-------------------------------------------------------------------- 187 (420)
T PRK09528 176 GSGSALILLVLL-------------------------------------------------------------------- 187 (420)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 877776655522
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
.+..+|.++....+ ++.+
T Consensus 188 -----------------------------------------~~~~~~~~~~~~~~---~~~~------------------ 205 (420)
T PRK09528 188 -----------------------------------------FFAKPDAPSTAKVA---NALG------------------ 205 (420)
T ss_pred -----------------------------------------hcccccccchhhhc---cchh------------------
Confidence 12222221100000 0000
Q ss_pred HHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH----hCCCcc-hHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED----AGSSLD-DYVASIIVAG 416 (607)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~-~~~~~~~~~~ 416 (607)
++++....++.++.+|+|.++...+..+..... ......+.|.++.+ .+.+.. .+....+..+
T Consensus 206 -------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 206 -------ANASAVSLKDALALLKLPKFWFLVLYVIGVACF-----YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred -------cccccccHHHHHHHccCCCeEeehHHHHHHHHH-----HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 000011112334567777665433322222111 12222234444432 233222 3455566667
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhh
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMI 496 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (607)
...++.++.+++.||+|+|+.+..+.++.++..+++++. ...+..+....+...... ...+....+.
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~------------~~~~~~~~~~~l~g~~~~-~~~~~~~~~~ 340 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA------------TGPLEVSILKLLHAFEVP-FLLVGVFKYI 340 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc------------ccHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 778899999999999999999888877777766665541 122222222222222221 1223344677
Q ss_pred ccccCccchhhHHHH-HHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccC
Q psy10231 497 AELFPLSVRGIMGGI-VCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPE 560 (607)
Q Consensus 497 ~e~~p~~~r~~~~g~-~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (607)
.|.+|++.|+++.+. .++...+|..+++.+.|.+.|..|++..|...+++.++..++.++..++
T Consensus 341 ~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 341 TLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888999999888765 5677889999999999999999999989998888887777666655443
No 79
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.92 E-value=9.8e-23 Score=212.41 Aligned_cols=151 Identities=13% Similarity=0.195 Sum_probs=135.5
Q ss_pred ccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhH
Q psy10231 38 LTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTL 117 (607)
Q Consensus 38 ~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~ 117 (607)
+......+.+|.+.+ ++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++.+++|++.
T Consensus 22 ~~~~~~~p~~~~i~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (394)
T PRK11652 22 MAQTIYVPAIADMAR---DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTV 98 (394)
T ss_pred HHHHHHhccHHHHHH---HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 344445566777777 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 118 LCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 118 l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
+++.|++.|++.+...+ ...+..|.+++++|+++.+....+..+|..++|.+++.+ +||+.|++.++..++..+
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 99999999999998888 889999999999999999999999999999999888776 899999988776665443
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.92 E-value=1.6e-22 Score=209.72 Aligned_cols=349 Identities=12% Similarity=0.030 Sum_probs=231.7
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCc----hhhhhhhhHHHHHHHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRK----TTVQLTAIPFIIGWTI 108 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr----~~l~~~~~l~~~~~~~ 108 (607)
.+...+..++..+.+|.+.+ |++.|..+.|++.+++.++..++++++|+++||+||| +.+.+...+. ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~---~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK---GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH---hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 33444556677777787777 8999999999999999999999999999999999994 3333222221 2233
Q ss_pred HHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhH
Q psy10231 109 ITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACA 183 (607)
Q Consensus 109 ~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~ 183 (607)
...++|++.+++.|++.|++.+...+ ..+++.++ +++|++..+....+.++|..+||.+++.+ +||..|++.+
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 44568899999999999999999988 88877776 46688888889988899999999999877 9999998777
Q ss_pred HHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccc
Q psy10231 184 VVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSA 263 (607)
Q Consensus 184 ~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~ 263 (607)
+..++..+
T Consensus 166 ~~~~~~~~------------------------------------------------------------------------ 173 (382)
T PRK11128 166 AGVASMLL------------------------------------------------------------------------ 173 (382)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 54443333
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHH
Q psy10231 264 FGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEI 343 (607)
Q Consensus 264 ~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 343 (607)
..+..||.++ +++.++
T Consensus 174 --------------------------------------~~~~~~~~~~----~~~~~~---------------------- 189 (382)
T PRK11128 174 --------------------------------------GQLLRPTIMP----QGESRQ---------------------- 189 (382)
T ss_pred --------------------------------------HHHccCCCCC----cccccc----------------------
Confidence 1112233210 000000
Q ss_pred HHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHH
Q psy10231 344 QQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMA 422 (607)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 422 (607)
+.++...++++++|+|+.+......+.... .......+.|.+.++.|.+.+ .+.......+..++..
T Consensus 190 -------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 257 (382)
T PRK11128 190 -------QESAGWPAWKALLKEPTVWRFLLCVSLLQG-----SHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIF 257 (382)
T ss_pred -------ccccccchHHHHHcChhHHHHHHHHHHHHH-----HhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHH
Confidence 000012345677777766653332222222 133455566777777776543 4555556667788888
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
.+.+++.||+++|+.+..+....++..+.++.. +..+..+...++.+...... .+....+..+. ++
T Consensus 258 ~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~ 323 (382)
T PRK11128 258 AFSNRLFRRWSARDLLLLSAICGVVRWGLMGST------------TALPWLIVIQILHCGTFTVC-HLAAMRYIAAR-PG 323 (382)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CH
Confidence 999999999999999888887777766555431 22333333344333333332 34444666665 45
Q ss_pred cchhhHHHHHHHH-HHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHH
Q psy10231 503 SVRGIMGGIVCSL-GYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAM 551 (607)
Q Consensus 503 ~~r~~~~g~~~~~-~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 551 (607)
+.+++..++.+.. ..+|..++|.+.|.+.|..|.. .++..+.+.+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 324 SEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 5568888887644 4567789999999999998864 5555555555443
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=2e-22 Score=213.69 Aligned_cols=147 Identities=18% Similarity=0.143 Sum_probs=127.4
Q ss_pred ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhhhHHHHHHHHHHhccchhH-HH
Q psy10231 42 IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTAIPFIIGWTIITVSKGFTL-LC 119 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~~l~~~~~~~~a~a~~~~~-l~ 119 (607)
+...+...+.+ ++|.++.+.+++.+.+.....+..+++|+++|| +||||+++++.+++.+++++++++++... ++
T Consensus 33 ~~~~l~~yl~~---~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~ 109 (489)
T PRK10207 33 VQGILAVFFVK---QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIF 109 (489)
T ss_pred HHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 33455566667 899999999999999998888999999999999 99999999999999999999999987555 45
Q ss_pred HHHHHHhhhhhhHhh-hHhHHhhccCCC--ccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 120 VGRFITGMAIGMSSA-CYVYVAEICLPN--DRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 120 ~~R~l~G~g~g~~~~-~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
++|+++|+|.|...+ ..+++.|.+|++ +|+++.+++..+.++|..+||.+++++ |||+.|++.++..++..+
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~ 188 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALL 188 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHH
Confidence 899999999999999 999999999877 458899999999999999999988888 999999997554333333
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=3.9e-22 Score=208.29 Aligned_cols=360 Identities=13% Similarity=0.090 Sum_probs=232.3
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-----cCch-hhhhhhhHHHHHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-----GRKT-TVQLTAIPFIIGW 106 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-----Grr~-~l~~~~~l~~~~~ 106 (607)
.+.-|...+.....+|..-+ +.|.|.+++|++...... .+..+++|+++||+ |||| .++++.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~---~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMT---VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34456666677778888888 789999999999777776 58899999999999 8876 6888888888888
Q ss_pred HHHHhc---cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHH
Q psy10231 107 TIITVS---KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQY 177 (607)
Q Consensus 107 ~~~a~a---~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~ 177 (607)
.+.++. .+++.+++..++.++..+...+ ..+++.|+.|+++|+++.++...+..+|.++++.++..+ +||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 887877 3578888888888999999999 999999999999999999999999999999998876654 7999
Q ss_pred HHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCC
Q psy10231 178 TSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPND 257 (607)
Q Consensus 178 ~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~ 257 (607)
.|++.++..++..+.
T Consensus 163 ~f~i~a~~~l~~~l~----------------------------------------------------------------- 177 (402)
T PRK11902 163 TYLLMAGLMLAGALT----------------------------------------------------------------- 177 (402)
T ss_pred HHHHHHHHHHHHHHH-----------------------------------------------------------------
Confidence 998888776654442
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhh
Q psy10231 258 RGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVAD 337 (607)
Q Consensus 258 r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~ 337 (607)
.+++||+++. +++.++.++
T Consensus 178 ---------------------------------------------~~~~~e~~~~---~~~~~~~~~------------- 196 (402)
T PRK11902 178 ---------------------------------------------TLWAPEPEVP---ARPPRSLGE------------- 196 (402)
T ss_pred ---------------------------------------------HHhcCCCccc---ccccchhHH-------------
Confidence 2233443211 000000000
Q ss_pred hHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcch-HHHHHHHH-
Q psy10231 338 AELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDD-YVASIIVA- 415 (607)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~- 415 (607)
+..+++++.+++|..+..+...++..... . .......+.+.++.|.+.+. +......+
T Consensus 197 ----------------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~-~---~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~ 256 (402)
T PRK11902 197 ----------------AVVGPLRDFFSRRGAWALLLLIVLYKLGD-A---FAGSLSTTFLIRGAGFSAGEVGIVNKTLGL 256 (402)
T ss_pred ----------------HHHHHHHHHHhCcCHHHHHHHHHHHHhHH-H---HHHHHHHHHHHHhcCCCHHHHHHHHhHHHH
Confidence 00113445677776554333222222211 1 11112223333445665442 33333333
Q ss_pred HHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHH---HHHHHHhccchhh
Q psy10231 416 GLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILA---NVCASMLGMLQLP 492 (607)
Q Consensus 416 ~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 492 (607)
...+++.++++++.||+++|+.+..+.....+..+.+...... .+..+.......+ ..........+..
T Consensus 257 ~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 328 (402)
T PRK11902 257 AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT--------PKHLWTMALAIGIENLCGGMGTAAFVALL 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999988776665555444333211111 0112222222211 1112222223444
Q ss_pred hhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 493 WVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 493 ~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
..++.+.+|.+. .++.+.+..++..+++.+.|.+.|..|+...|...+.+++++.++.+
T Consensus 329 ~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 329 MALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 466777766554 45555566677776777899999999999888888887777766643
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.91 E-value=9.5e-23 Score=241.38 Aligned_cols=357 Identities=13% Similarity=0.014 Sum_probs=225.7
Q ss_pred cccccccccccCCCcccccC--ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH---Hhccch
Q psy10231 41 AIPSILIPQLQKPSSIISIS--SDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII---TVSKGF 115 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s--~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~---a~a~~~ 115 (607)
.....+.+.+.. +++.+ ....+++.+++.+++.++++++|+++||+|||++++++.++..++.++. ..++++
T Consensus 27 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 103 (1146)
T PRK08633 27 GHKILIQNTLIK---AYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWF 103 (1146)
T ss_pred HHHHHHHHHHHH---HcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 333444455544 44444 3447999999999999999999999999999999999887766555544 445789
Q ss_pred hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-h------------HHHHHHH
Q psy10231 116 TLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-T------------WQYTSAA 181 (607)
Q Consensus 116 ~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~------------Wr~~f~~ 181 (607)
+.++++|+++|++.+...+ ..+++.|++++++|++++++...+.++|.++|+.+++++ . |++.+.+
T Consensus 104 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (1146)
T PRK08633 104 WLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGL 183 (1146)
T ss_pred HHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999998876 2 2222222
Q ss_pred hHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccc
Q psy10231 182 CAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYL 261 (607)
Q Consensus 182 ~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~ 261 (607)
..+...+..
T Consensus 184 ~~~~~~~~~----------------------------------------------------------------------- 192 (1146)
T PRK08633 184 VLLAVAVLG----------------------------------------------------------------------- 192 (1146)
T ss_pred HHHHHHHHH-----------------------------------------------------------------------
Confidence 222211111
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHH
Q psy10231 262 SAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELK 341 (607)
Q Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 341 (607)
++..+.+||+|.....+++ ++.. ....
T Consensus 193 --------------------------------------~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~ 219 (1146)
T PRK08633 193 --------------------------------------LIFAYRLPKVPAAAPEVFD-KKKY--------------LFPK 219 (1146)
T ss_pred --------------------------------------HHHHhcCcCCCCCCccccc-cccc--------------ccHH
Confidence 1123334554321100000 0000 0000
Q ss_pred HHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc--hHHHHHHHHHHH
Q psy10231 342 EIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD--DYVASIIVAGLR 418 (607)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~ 418 (607)
. ....++.+++++..+..++... +.. ........+.|.++.+ .|.+.. .+......+++.
T Consensus 220 ~------------~~~~~~~l~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~ 282 (1146)
T PRK08633 220 L------------LWRNLKLLRSDRVLWLAIIGLS-YFW----FISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGI 282 (1146)
T ss_pred H------------HHHHHHHHhcCcHHHHHHHHHH-HHH----HHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 0 0012334555554443222222 211 1234455566777654 466443 455667777888
Q ss_pred HHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcc
Q psy10231 419 FFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAE 498 (607)
Q Consensus 419 ~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 498 (607)
+++.++.+++.||+++++.+..+.++.+++.+++.+. ...+..++..++++.+.+. ..+...+++.+
T Consensus 283 ~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 349 (1146)
T PRK08633 283 GIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA------------PSLASVLVLFFLFGFSAGL-FIVPLNALIQF 349 (1146)
T ss_pred HHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHHHHHH-hhHHHHHHHhh
Confidence 8999999999999999888877777666666555441 1122223333333333332 23445688889
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh-hhhHHHHHHHHHHHHHHHHHh
Q psy10231 499 LFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL-LNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 499 ~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~ 554 (607)
..|++.||+++|+.+++.+++..+++.+.+.+... .++...+++.+.++++..++.
T Consensus 350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 350 RAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988777666544331 233334444444444433333
No 84
>KOG2615|consensus
Probab=99.91 E-value=5.9e-23 Score=197.07 Aligned_cols=115 Identities=19% Similarity=0.226 Sum_probs=109.3
Q ss_pred cCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhhhHhH
Q psy10231 59 ISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSACYVY 138 (607)
Q Consensus 59 ~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~~~~~ 138 (607)
.+..-.|.+.|+|.+.+.+.++.+|.++||+|||.++++|++..++..++.+++.||..++++|++.|+..|...+..++
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAi 144 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAI 144 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHH
Confidence 34556899999999999999999999999999999999999999999999999999977777799999999999999999
Q ss_pred HhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 139 VAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 139 i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
++|.+++|+|++.++..+..+++|.++||.+|+++
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 99999999999999999999999999999999987
No 85
>KOG2504|consensus
Probab=99.91 E-value=5.7e-24 Score=223.56 Aligned_cols=406 Identities=13% Similarity=0.118 Sum_probs=271.6
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS 112 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a 112 (607)
++.+|+..... .+.+.+++ +++.+..+++|+.++......+..++.+.+.||+|.|++.++|.++..++.++.+|+
T Consensus 56 ~~~~g~~~~~G-v~~~~~~~---~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~ 131 (509)
T KOG2504|consen 56 LSTDGLINSFG-LLFEELMD---YFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFA 131 (509)
T ss_pred Hhhhcchheeh-hhHHHHHH---HhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 33444444433 67778888 999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHH-HHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHH
Q psy10231 113 KGFTLLCVG-RFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVA 186 (607)
Q Consensus 113 ~~~~~l~~~-R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~ 186 (607)
+++|++++. -++.|+|.|..+. ..+.+. .+.+++|+.+.++...+.++|.++-|.+...+ |||+.+++.+.+.
T Consensus 132 ~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 132 TSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS 210 (509)
T ss_pred hhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 999999887 5999999999999 777777 55578999999999999999999999888877 9999999998888
Q ss_pred HHHHHHHhcC-CCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 187 LVGFAAMHAV-PETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 187 ~~~~~~~~~~-pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
+-..++...+ |.+++...++.++.+. ... ..|....+
T Consensus 211 l~~~~~~~~~rp~~~~~~~~~~~~~~~---~~~------------------------------~~~~~~~~--------- 248 (509)
T KOG2504|consen 211 LNVLVAGALLRPLSPPKKPNEEKDLRN---SAA------------------------------SVESTPKP--------- 248 (509)
T ss_pred HHHHHHHHHcCCCCcCCCchhhhhhcc---ccc------------------------------cccccccc---------
Confidence 7666554333 3333221110000000 000 00000000
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
.....++ +.. ...+....+..+.++
T Consensus 249 ------------------------------------~~~~~~~---------~~~----------~~~~~~~~~~~~~~~ 273 (509)
T KOG2504|consen 249 ------------------------------------VELRISE---------RDS----------GLKKLSLSNLATLKR 273 (509)
T ss_pred ------------------------------------ccccccc---------CCC----------CCCcccccchhhhhh
Confidence 0000000 000 000000001111111
Q ss_pred HHHHhhcCCccch----hhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDH----CAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFF 420 (607)
Q Consensus 346 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ 420 (607)
..++.+....+.. ..++++++.+ +...+.......+++....++|.+.++.+++. ++.....+.++..++
T Consensus 274 ~~~~~~~~~~~~~~~~~d~~ll~~~~f-----l~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~ 348 (509)
T KOG2504|consen 274 GPDKWRNSPLQAFLSMLDLSLLKDPKF-----LLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDII 348 (509)
T ss_pred CCccccccchhhhhhhhhHHHHcCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhh
Confidence 1111110011111 2567777533 33444444455567888899999998888855 467888999999999
Q ss_pred HHHHHhHhhcccCCc--hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcc
Q psy10231 421 MAIIGSACIQMFSRR--ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAE 498 (607)
Q Consensus 421 ~~~~~g~l~d~~grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 498 (607)
+.++.|++.|+...+ ....++.+..+++...+.+ ...+..+...+++.+.............+.|
T Consensus 349 gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~-------------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~ 415 (509)
T KOG2504|consen 349 GRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF-------------ATTYVGLIVFSILFGFCVGSFSSLTPVILVD 415 (509)
T ss_pred hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH-------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998843 3444444555555433333 2233333333333333333444555568899
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 499 LFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 499 ~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
+.+.+.-..+.|+...+..++..++|++.|.+.|..+ |...|+..+...+++..+. +..+
T Consensus 416 ~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~-~~~~ 476 (509)
T KOG2504|consen 416 LVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL-LILR 476 (509)
T ss_pred HcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH-HHhH
Confidence 9999999999999999999999999999999999888 6667777766666666553 3434
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=2.4e-22 Score=209.49 Aligned_cols=358 Identities=13% Similarity=0.108 Sum_probs=227.6
Q ss_pred cccccccccccc-cCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHH---Hhc--
Q psy10231 39 THAIPSILIPQL-QKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTII---TVS-- 112 (607)
Q Consensus 39 ~~~~~~~~~p~l-~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~---a~a-- 112 (607)
..+...+.+|.. .+ ++|.+..+.+++.+.+.++..+++++.|+++||+|||+.++.+.+...++.... .+.
T Consensus 17 ~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (396)
T TIGR00882 17 IMSAYFPFFPIWLHD---VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPL 93 (396)
T ss_pred HHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334444555543 44 689999999999999999999999999999999999999988776665543322 112
Q ss_pred ---cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHHH
Q psy10231 113 ---KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAVV 185 (607)
Q Consensus 113 ---~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~~ 185 (607)
+.+..+++.|++.|++.+...+ ...+..|..+ +++...+......++|..+++.+++.+ +||+.|++.+++
T Consensus 94 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~ 171 (396)
T TIGR00882 94 LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGF 171 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHH
Confidence 2234556778999999988888 7777777533 345566677777788888888888766 999999988877
Q ss_pred HHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchh
Q psy10231 186 ALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFG 265 (607)
Q Consensus 186 ~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~ 265 (607)
.++..++.
T Consensus 172 ~~~~~~~~------------------------------------------------------------------------ 179 (396)
T TIGR00882 172 ALILMLLL------------------------------------------------------------------------ 179 (396)
T ss_pred HHHHHHHH------------------------------------------------------------------------
Confidence 77665421
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 266 PVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 266 ~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
....||+|.. ++.++. .+
T Consensus 180 -------------------------------------~~~~~~~~~~-------~~~~~~----~~-------------- 197 (396)
T TIGR00882 180 -------------------------------------MFAKPKAPSS-------ATVANA----LG-------------- 197 (396)
T ss_pred -------------------------------------HHhCCCCchh-------hhhhcc----cc--------------
Confidence 1222332210 000000 00
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh----CCCcc-hHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA----GSSLD-DYVASIIVAGLRFF 420 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~-~~~~~~~~~~~~~~ 420 (607)
.+++..+.++..+.+|+|+.+...+..+... ..+.....+.+.++++. +.+.. .+....+..+...+
T Consensus 198 ---~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~ 269 (396)
T TIGR00882 198 ---ANASAFSLKLALELFRQRKFWMFVLYVVGVA-----CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNAL 269 (396)
T ss_pred ---cccCCCCHHHHHHHHcCCcHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHH
Confidence 0001111234456777776554322222111 11233333455555442 22222 34455556677788
Q ss_pred HHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc
Q psy10231 421 MAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF 500 (607)
Q Consensus 421 ~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 500 (607)
+....+++.||+|+|+.+..+..+.++........ ...+.......+.+..... .......+..+..
T Consensus 270 ~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~------------~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~ 336 (396)
T TIGR00882 270 IMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA------------TTALEVVILKMLHAFEVPF-LLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc------------CChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 88999999999999999888877777666544331 2222222222222222211 1223335667778
Q ss_pred CccchhhHHHH-HHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhh
Q psy10231 501 PLSVRGIMGGI-VCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 501 p~~~r~~~~g~-~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 556 (607)
|++.++++.+. .+....+|+.+++.+.|.+.+..|+...|.+.+++.++..++..+
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88888887766 567889999999999999999999998998888887777665443
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.90 E-value=2.9e-22 Score=202.12 Aligned_cols=157 Identities=15% Similarity=0.205 Sum_probs=137.6
Q ss_pred ccccccccccCCCcccccCccc-hhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHH
Q psy10231 42 IPSILIPQLQKPSSIISISSDD-ASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCV 120 (607)
Q Consensus 42 ~~~~~~p~l~~~~~~~~~s~~~-~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~ 120 (607)
..+.+.|.+.+ |+|+|+.| .|.+.++++.+++++.++.|.++||+|.|+++.++.+.+++.+++.++++++..+.+
T Consensus 44 n~s~a~p~L~~---elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 44 GESFITPYLLT---VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hHHHHHHHHHH---HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888888 99999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHH---HHHHHHHHHh
Q psy10231 121 GRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAV---VALVGFAAMH 194 (607)
Q Consensus 121 ~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~---~~~~~~~~~~ 194 (607)
.|++.|++.|.......++..++|+++|+++.++...+..+|.+++++++..+ |||+.+.+.-+ ...++++..+
T Consensus 121 ~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 121 MEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 88876655422 2233333335
Q ss_pred cCCCChh
Q psy10231 195 AVPETPS 201 (607)
Q Consensus 195 ~~pes~~ 201 (607)
++|..++
T Consensus 201 ~LP~~~~ 207 (511)
T TIGR00806 201 FLKRPKR 207 (511)
T ss_pred hCCCCch
Confidence 5564443
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.90 E-value=8.6e-22 Score=202.36 Aligned_cols=329 Identities=14% Similarity=0.091 Sum_probs=212.6
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-----cCchhh-hhhhhHHHHHHHHHHhc
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-----GRKTTV-QLTAIPFIIGWTIITVS 112 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-----Grr~~l-~~~~~l~~~~~~~~a~a 112 (607)
-.+..++.+|.+.+ |+|+|.++.+++.+. .+...+ .+++|+++||+ ||||.+ +.+.++.+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~ 77 (356)
T TIGR00901 3 PLGLVGNTLPYWLR---SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL 77 (356)
T ss_pred CchhHHhHHHHHHH---HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 34556677888888 999999999999766 455554 89999999998 899974 66777888887777777
Q ss_pred ---cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----h--------HH
Q psy10231 113 ---KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----T--------WQ 176 (607)
Q Consensus 113 ---~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~--------Wr 176 (607)
.+.+.+.+..++.|++.+...+ ..+++.|++|+++|+++.++...+..+|.++++.++..+ + ||
T Consensus 78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 4566777888889999998889 999999999999999999999999999999999888766 6 88
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCC
Q psy10231 177 YTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPN 256 (607)
Q Consensus 177 ~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~ 256 (607)
..|++.++..++..+..
T Consensus 158 ~~f~i~ai~~l~~~~~~--------------------------------------------------------------- 174 (356)
T TIGR00901 158 YIFFWTALLILPGLLVT--------------------------------------------------------------- 174 (356)
T ss_pred HHHHHHHHHHHHHHHHH---------------------------------------------------------------
Confidence 88888777666544421
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhh
Q psy10231 257 DRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVA 336 (607)
Q Consensus 257 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~ 336 (607)
.+..||+++. +.+.++.++
T Consensus 175 ----------------------------------------------~~~~~e~~~~---~~~~~~~~~------------ 193 (356)
T TIGR00901 175 ----------------------------------------------LFLAKEPQED---ASVPKPLTQ------------ 193 (356)
T ss_pred ----------------------------------------------HHhccCCCcc---cccchhHHH------------
Confidence 1223442110 000000000
Q ss_pred hhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcch-HHHHHHHH
Q psy10231 337 DAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDD-YVASIIVA 415 (607)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~ 415 (607)
+ ....++++++++..+. ......... ......+....+.|.++++.|.+.+. +......+
T Consensus 194 -----~------------~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~ 254 (356)
T TIGR00901 194 -----A------------VLKPIREFFQRKNMIQ-ALLLLLLIV-LYKLGDSAATVLTTLFLLDMGFSKEEIALVAKING 254 (356)
T ss_pred -----H------------HHHHHHHHHHhcCchH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHH
Confidence 0 0012234444543222 111111111 12233456677788888776765443 33343334
Q ss_pred -HHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhh
Q psy10231 416 -GLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWV 494 (607)
Q Consensus 416 -~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (607)
+..+++.++++++.||+|||+.+..+.++.++....+.+......+.. ......+......++.....+ ...+...+
T Consensus 255 ~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 332 (356)
T TIGR00901 255 LLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDG-ITFPHLLMLFLTITLEAVTGG-LGTVAFVA 332 (356)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cccchHHHHHHHHHHHHHHhH-HHHHHHHH
Confidence 567789999999999999999888777776665544433210000000 000111222222222223222 33455668
Q ss_pred hhccccCccchhhHHHHHHHHHH
Q psy10231 495 MIAELFPLSVRGIMGGIVCSLGY 517 (607)
Q Consensus 495 ~~~e~~p~~~r~~~~g~~~~~~~ 517 (607)
+..|.+|++.||+..|+.+...+
T Consensus 333 ~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 333 FLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhcCCCccHHHHHHHHHHHh
Confidence 99999999999999999887654
No 89
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=1.5e-21 Score=230.45 Aligned_cols=347 Identities=12% Similarity=0.064 Sum_probs=223.7
Q ss_pred cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhh---hhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHh
Q psy10231 62 DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQL---TAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYV 137 (607)
Q Consensus 62 ~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~---~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~ 137 (607)
...++..+++.+++.++++++|+++||+|||+++.. ..++..+..+.+...+|+++++++|+++|++.+...| ..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 347888899999999999999999999999997533 3333333334444558999999999999999999999 999
Q ss_pred HHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccch
Q psy10231 138 YVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEF 213 (607)
Q Consensus 138 ~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~ 213 (607)
++.|++++++|++++++.+.+.++|.++||.+++++ +|++.|+..++..++.+++.+++|+++..
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 200 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA----------- 200 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC-----------
Confidence 999999999999999999999999999999999988 89998855555555444433334433210
Q ss_pred hhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhH
Q psy10231 214 RYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACA 293 (607)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~ 293 (607)
T Consensus 201 -------------------------------------------------------------------------------- 200 (1140)
T PRK06814 201 -------------------------------------------------------------------------------- 200 (1140)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHH
Q psy10231 294 VVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFF 373 (607)
Q Consensus 294 i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (607)
+.+.+..... .++ ....++.+.+++.++...+
T Consensus 201 ----------------------~~~~~~~~~~--------------~~~------------~~~~~~~~~~~~~~~~~~~ 232 (1140)
T PRK06814 201 ----------------------APDLKIDRNI--------------IRS------------TITLLKYAKADKRIWLAIL 232 (1140)
T ss_pred ----------------------CCCCeeccch--------------HHH------------HHHHHHHHhcCchHHHHHH
Confidence 0000000000 000 0012334455554444222
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHH
Q psy10231 374 ILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGI 451 (607)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~ 451 (607)
......+ ....+..+.|.++++ .|.+.. .+......+++.+++.++.+++.|+..+++.+..+.++.++..+.
T Consensus 233 ~~~~~~~-----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (1140)
T PRK06814 233 GISWFWL-----VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLD 307 (1140)
T ss_pred HHHHHHH-----HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHH
Confidence 2222211 234566678888875 355443 566777888899999999999998887776665555555444443
Q ss_pred Hhhhhhh--h-ccc-----cCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHH
Q psy10231 452 SGTYEYY--F-SEL-----SMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTT 523 (607)
Q Consensus 452 ~~~~~~~--~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~ 523 (607)
+++.... . ... ........+...+..++++.+.+. ..+...+++.+..|++.||+++|+.+++..++..++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 308 LAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGL-YIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred HHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHH-hHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 3321000 0 000 000002233333333334333333 334456888999999999999999999999999999
Q ss_pred hhhcHHHHHh-hhhHHHHHHHHHHHHHHHHH
Q psy10231 524 VKMYPDLMYL-LNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 524 ~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~ 553 (607)
+.+.+.+.+. .++...+++.+.+.++.+.+
T Consensus 387 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 387 TIILALLQALGFSIPWIILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9999888743 34444454444443443333
No 90
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.7e-21 Score=186.22 Aligned_cols=373 Identities=14% Similarity=0.119 Sum_probs=263.6
Q ss_pred HhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHH-
Q psy10231 32 KLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIIT- 110 (607)
Q Consensus 32 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a- 110 (607)
.+++.|+......+++|.+++ .|+++..|.+++..+++.|+.+.+++.|++.+|+|+|+.++.++.+++++..+..
T Consensus 21 lFfl~G~~~~l~diLip~l~~---~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~p 97 (422)
T COG0738 21 LFFLWGFITCLNDILIPHLKE---VFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWP 97 (422)
T ss_pred HHHHHHHHhhcchhhHHHHHH---HhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 345678888888999999999 9999999999999999999999999999999999999999999999999999984
Q ss_pred --hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHH
Q psy10231 111 --VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVA 186 (607)
Q Consensus 111 --~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~ 186 (607)
-..+|..++++-++.|.|.+...+ +..+++...++++-.+.+++.+...++|.+++|+++..+ -|-+..-....
T Consensus 98 Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~-- 175 (422)
T COG0738 98 AASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAA-- 175 (422)
T ss_pred hhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHH--
Confidence 668899999999999999999999 999999999999999999999999999999999999876 22211000000
Q ss_pred HHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhh
Q psy10231 187 LVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGP 266 (607)
Q Consensus 187 ~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~ 266 (607)
T Consensus 176 -------------------------------------------------------------------------------- 175 (422)
T COG0738 176 -------------------------------------------------------------------------------- 175 (422)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhh--ccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 267 VFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAM--HAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 267 ~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~--~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
............|+.++.......++..... ...|+.+. ..++
T Consensus 176 ------~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~-----~~~~------------------------ 220 (422)
T COG0738 176 ------QILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV-----AAPS------------------------ 220 (422)
T ss_pred ------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----cccc------------------------
Confidence 0000011112246666665444433333332 33344211 0000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~ 422 (607)
+.+.......+++++|+.+...+..++... .......|++.++.+ .|.+.. +......+..+.++|+
T Consensus 221 ------~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG-----~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR 289 (422)
T COG0738 221 ------LGASGSAGLSSLFQNKHLRLGVLAIFLYVG-----AEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR 289 (422)
T ss_pred ------ccccccchHHHHHhChHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH
Confidence 000111145677888876654443333322 356677888888877 565544 4556677778889999
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
+++.++..|+...+.+........+.++...+. .. .+.+......+.+.....|..+....+..|.
T Consensus 290 Fig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~-------------~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~ 355 (422)
T COG0738 290 FIGSALMSRIKPEKYLAFYALIAILLLLAVALI-------------GG-VVALYALFLIGLFNSIMFPTIFSLALKNLGE 355 (422)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh-------------cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCc
Confidence 999999999998888877766555555555441 22 2233333344455556678888999999983
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHH
Q psy10231 503 SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAM 551 (607)
Q Consensus 503 ~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 551 (607)
+ ....|....+.-.|+++.|++.|++.|..|....+......|.+..
T Consensus 356 ~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 356 H--TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred c--ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 3 3444555566668999999999999999988776665555555544
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=4.7e-20 Score=195.59 Aligned_cols=156 Identities=16% Similarity=0.105 Sum_probs=133.0
Q ss_pred cccccccccccccc-cCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhhhHHHHHHHHHHhccc
Q psy10231 37 NLTHAIPSILIPQL-QKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTAIPFIIGWTIITVSKG 114 (607)
Q Consensus 37 ~~~~~~~~~~~p~l-~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~~l~~~~~~~~a~a~~ 114 (607)
.+.+....+.+|.. .+ ..++|.+..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++
T Consensus 23 ~~~~~~~~~~L~~yl~~-~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~ 101 (475)
T TIGR00924 23 RFSYYGMQGILAVYLVQ-QAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIY 101 (475)
T ss_pred HHHHHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhccc
Confidence 34433333444444 33 11289999999999999999999999999999999 89999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCc---cccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPND---RGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVA 186 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~---r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~ 186 (607)
++.++++|++.|+|.|...+ ..++++|++++++ |+.+.++++.+.++|..+|+.+++.+ +||+.|++.++..
T Consensus 102 ~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~ 181 (475)
T TIGR00924 102 PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGM 181 (475)
T ss_pred HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 99999999999999999999 9999999998764 88899999999999999999999887 8999999988655
Q ss_pred HHHHHHH
Q psy10231 187 LVGFAAM 193 (607)
Q Consensus 187 ~~~~~~~ 193 (607)
++..+..
T Consensus 182 ~~~~l~~ 188 (475)
T TIGR00924 182 VIGLLTF 188 (475)
T ss_pred HHHHHHH
Confidence 5544433
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=1.9e-21 Score=205.67 Aligned_cols=331 Identities=16% Similarity=0.152 Sum_probs=213.5
Q ss_pred cccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh----hcCch-hhhhhhhHHHHHHHHHHhccc-----
Q psy10231 45 ILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL----LGRKT-TVQLTAIPFIIGWTIITVSKG----- 114 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr----~Grr~-~l~~~~~l~~~~~~~~a~a~~----- 114 (607)
.+.+.+.+ ++|+++.+.|++.++..+..++..++.|+++|| +|||| .++.+....+++.+++.+.++
T Consensus 21 ~l~~~~~~---~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~ 97 (437)
T TIGR00792 21 YLLFFYTD---VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATG 97 (437)
T ss_pred HHHHHHHH---ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcch
Confidence 45566666 899999999999999999999999999999997 78855 566788888888888877765
Q ss_pred -hhHHHHHHHHHhhhhhhHhh-hHhHHhhccC-CCccccccchhhHHHHHHHHHHHHHhhhh-----------hHHHHHH
Q psy10231 115 -FTLLCVGRFITGMAIGMSSA-CYVYVAEICL-PNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----------TWQYTSA 180 (607)
Q Consensus 115 -~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----------~Wr~~f~ 180 (607)
...+++.+++.+++.+...+ ..++..|..+ +++|++..++...+..+|..+++.+...+ +||+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~ 177 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFAL 177 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHH
Confidence 45667788999999888777 7888899874 68899999988888888776655443221 4666666
Q ss_pred HhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCccc
Q psy10231 181 ACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGY 260 (607)
Q Consensus 181 ~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~ 260 (607)
+.+++.++..+
T Consensus 178 i~~~l~~~~~~--------------------------------------------------------------------- 188 (437)
T TIGR00792 178 VLALIGVVSLI--------------------------------------------------------------------- 188 (437)
T ss_pred HHHHHHHHHHH---------------------------------------------------------------------
Confidence 55555544433
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHH
Q psy10231 261 LSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAEL 340 (607)
Q Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (607)
+..+.++|.+.. +.++.
T Consensus 189 ----------------------------------------~~~~~~~e~~~~-----~~~~~------------------ 205 (437)
T TIGR00792 189 ----------------------------------------ICFFGTKERYSE-----IPKNI------------------ 205 (437)
T ss_pred ----------------------------------------HHHcCCEecCCC-----CCccc------------------
Confidence 233445553210 00000
Q ss_pred HHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcchHHHHHHHHHHHH
Q psy10231 341 KEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLDDYVASIIVAGLRF 419 (607)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 419 (607)
+++.+..+.+++++++|.++.... ...+.. .+.+....+.+.+.+. .+.+........+..+..+
T Consensus 206 ---------~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 271 (437)
T TIGR00792 206 ---------EKKLSLKQIFKALFKNDQLLILCL-AYLFYN----LAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGL 271 (437)
T ss_pred ---------ccCCCHHHHHHHHhCCHHHHHHHH-HHHHHH----HHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHH
Confidence 000001123345566665544222 221111 1223333333444332 1222223445555678888
Q ss_pred HHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 420 FMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 420 ~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
++.++.+++.||+|+|+.+..+..+.+++.+.+.+. . +..+.......+...+.+. ..+..+++.+|.
T Consensus 272 i~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 339 (437)
T TIGR00792 272 IGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA----------G-SNLPLILVLIILAGFGQNF-VTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc----------c-hhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhh
Confidence 999999999999999999888877776666554331 0 1112222222222222222 245566777777
Q ss_pred cC-------ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 500 FP-------LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 500 ~p-------~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
.+ ++.+|.+.|+.+.+..++..+++.+.|.+.+..|+
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 54 45679999999999999999999999999887665
No 93
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.88 E-value=8.5e-21 Score=200.65 Aligned_cols=369 Identities=15% Similarity=0.125 Sum_probs=250.5
Q ss_pred cCcchhHHHhhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHH
Q psy10231 24 SDDASWIGKLHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFI 103 (607)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~ 103 (607)
.-+.-|+..++ ..+...+....++.+.. +..-|+...+++.++..+...+.++++|.++||+.|||+++.+-++..
T Consensus 11 ~Fr~lw~a~~i-S~lG~~~~~va~~wlv~---~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~ 86 (524)
T PF05977_consen 11 NFRRLWIAQLI-SNLGDWMQTVALAWLVT---QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRA 86 (524)
T ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 34445555543 33344444555565555 566688999999999999999999999999999999999999988877
Q ss_pred HHHHHHHhc-----cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----
Q psy10231 104 IGWTIITVS-----KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---- 173 (607)
Q Consensus 104 ~~~~~~a~a-----~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---- 173 (607)
+..++.++. .+.+.+++.-++.|++.+...| -.+++.|..|+++...+.++.+...++..++||.+++.+
T Consensus 87 ~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~ 166 (524)
T PF05977_consen 87 LVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF 166 (524)
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 665554432 4789999999999999999999 999999999999999999999999999999999999876
Q ss_pred hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhc
Q psy10231 174 TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEIC 253 (607)
Q Consensus 174 ~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~ 253 (607)
|-.+.|.+.++.-++....+..++
T Consensus 167 G~~~~f~inalsfl~~i~~l~~~~-------------------------------------------------------- 190 (524)
T PF05977_consen 167 GAAAAFLINALSFLISILALLRWK-------------------------------------------------------- 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc--------------------------------------------------------
Confidence 666777776654443333111111
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCc
Q psy10231 254 LPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRST 333 (607)
Q Consensus 254 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~ 333 (607)
++.+ .+...+| ...
T Consensus 191 -----------------------------------------------------~~~~----~~~~~~e--~~~------- 204 (524)
T PF05977_consen 191 -----------------------------------------------------PPPP----PSSLPRE--RFF------- 204 (524)
T ss_pred -----------------------------------------------------cccc----ccccchh--hhh-------
Confidence 1100 0000000 000
Q ss_pred hhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHH
Q psy10231 334 AVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVAS 411 (607)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~ 411 (607)
+++ ...++...++|..+. .+....+..+. ...+...+|.+.++ .+.+.. -+...
T Consensus 205 -------~~l------------~~G~ryv~~~~~l~~-~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~~a~~yGll~ 260 (524)
T PF05977_consen 205 -------SAL------------REGLRYVRSSPPLRS-VLLRSFLFNLF----ASAVWALLPLFARDVLGGGASGYGLLL 260 (524)
T ss_pred -------hhH------------HHHHHHHhcchHHHH-HHHHHHHHHHh----hhHHHHhhhHHHHHHhCCcHHHHHHHH
Confidence 000 011222233343332 22222222111 22333446776654 354433 35677
Q ss_pred HHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchh
Q psy10231 412 IIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQL 491 (607)
Q Consensus 412 ~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (607)
...+++.++|.++.+++.+|+++++++..+.+..+++.+.+++. .+.+......++.+... ......
T Consensus 261 a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~------------~~~~~~~~~l~l~G~~~-~~~~~~ 327 (524)
T PF05977_consen 261 AAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS------------PSFWLALIALFLAGAAW-IIANSS 327 (524)
T ss_pred HHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc------------hHHHHHHHHHHHHHHHH-HHHHHH
Confidence 78899999999999999999999888888888777777776652 22233333333333332 233344
Q ss_pred hhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q psy10231 492 PWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 492 ~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 555 (607)
..+...+..|++.||++.++..++...+..++..+.|.+.+..|....+.+.++..+++.++..
T Consensus 328 ~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 328 LNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5578889999999999999999999999999999999999999988887766665555555443
No 94
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=2.3e-21 Score=211.32 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=123.1
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc---
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK--- 113 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~--- 113 (607)
++..++....+|.+.+ +|++++.+.|++.+.+.++++++.++.++++||+|||+.+.++.++++++++++++.+
T Consensus 46 ~~~~g~~~~~l~~iek---~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~ 122 (633)
T TIGR00805 46 LLYNGLVNSSLTTIER---RFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLS 122 (633)
T ss_pred HHHHHHHHhhchhhhh---hhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhc
Confidence 3455677888888888 9999999999999999999999999999999999999999999999999999998763
Q ss_pred ------------------------------------------------chhHHHHHHHHHhhhhhhHhh-hHhHHhhccC
Q psy10231 114 ------------------------------------------------GFTLLCVGRFITGMAIGMSSA-CYVYVAEICL 144 (607)
Q Consensus 114 ------------------------------------------------~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~ 144 (607)
.+..++++|+++|+|.+..++ +.+++.|++|
T Consensus 123 ~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~ 202 (633)
T TIGR00805 123 GRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK 202 (633)
T ss_pred CCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC
Confidence 256778999999999999999 9999999999
Q ss_pred CCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 145 PNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 145 ~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
+++|+++++++..+..+|..+|+++++.+
T Consensus 203 ~~~~~~~~~i~~~~~~iG~~lG~llgg~l 231 (633)
T TIGR00805 203 SKNSPLYIGILESIAVFGPAFGYLLGSFC 231 (633)
T ss_pred ccccHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999888764
No 95
>KOG3764|consensus
Probab=99.87 E-value=8.5e-22 Score=190.30 Aligned_cols=341 Identities=11% Similarity=0.051 Sum_probs=236.2
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
+.+-+++++|++.+++.+.+.+.+++.|.+.||+|+|..+++|++.+..++++.++..+|++++++|.+||+|.+...+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 5667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHhhccCCCc-cccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhcccc
Q psy10231 135 CYVYVAEICLPND-RGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMA 209 (607)
Q Consensus 135 ~~~~i~e~~~~~~-r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~ 209 (607)
+.++++|.+|+++ |++++|+.-.+.++|.++||.+|+.+ |.+..|++.+++.++-..+.++
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~-------------- 245 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLL-------------- 245 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHh--------------
Confidence 9999999999765 79999999999999999999999988 9999999999998887663211
Q ss_pred ccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHH
Q psy10231 210 IGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTS 289 (607)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~ 289 (607)
T Consensus 246 -------------------------------------------------------------------------------- 245 (464)
T KOG3764|consen 246 -------------------------------------------------------------------------------- 245 (464)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcch
Q psy10231 290 AACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVW 369 (607)
Q Consensus 290 ~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (607)
.++.+. .+. ++..+...+++++++|..+
T Consensus 246 ---------------vi~p~~------~~~-------------------------------~~~~~~~~~~~Ll~dP~I~ 273 (464)
T KOG3764|consen 246 ---------------VIEPTE------MDP-------------------------------DSTEQGTPMWSLLMDPYIL 273 (464)
T ss_pred ---------------eeCccc------cCc-------------------------------cccccCccHHHHHhCchHh
Confidence 111110 000 0111223455666666433
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHH--hhHHH
Q psy10231 370 KPFFILIGFFLFQEASGMYIVLYYAVNFF-EDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATT--SAFFM 445 (607)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~--~~~~~ 445 (607)
.. ...+.+. +. +....---++.+. ++...+. ..+.......+...+++.+.|.+.||++.-+++.. +.+..
T Consensus 274 ~~---agai~~~-n~-~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~ 348 (464)
T KOG3764|consen 274 LI---AGAITFS-NS-SLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATV 348 (464)
T ss_pred hh---hcchhhc-cc-hHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHH
Confidence 21 1111111 11 1111111122222 2223222 34556666778889999999999999995444333 22222
Q ss_pred HHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc---chhhHHHHHHHHHHHHHHH
Q psy10231 446 ALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS---VRGIMGGIVCSLGYLFIFT 522 (607)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~~~~~~i 522 (607)
..+.....+.. .-...++........+........|.. .+..|.-..+ ..|...++......++.++
T Consensus 349 G~~~~~iP~~~---------~~~~L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~ 418 (464)
T KOG3764|consen 349 GVSSGPIPFAT---------SIAQLWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI 418 (464)
T ss_pred HHHhchhHhhh---------hHHHHhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhc
Confidence 22222222210 001122333333333333333344443 4444443344 6689999999999999999
Q ss_pred HhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 523 TVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 523 ~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+|.+.|.+.+..|+.+...+.+...++.+-+..++
T Consensus 419 GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 419 GPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred cccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888888777665443
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.87 E-value=1.7e-19 Score=192.46 Aligned_cols=145 Identities=18% Similarity=0.150 Sum_probs=122.2
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhhhHHHHHHHHHHhcc-chhHHHHH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTAIPFIIGWTIITVSK-GFTLLCVG 121 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~~l~~~~~~~~a~a~-~~~~l~~~ 121 (607)
..+...+.+ ++|.++.+.+++.+.+........+++|+++|| +|||++++.+.++..++.+++++++ +.+.+.++
T Consensus 42 ~~l~~yl~~---~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~ 118 (500)
T PRK09584 42 GIMAVYLVK---QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMG 118 (500)
T ss_pred HHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 334445556 899999999999988877767777899999999 5999999999999999999999875 56677788
Q ss_pred HHHHhhhhhhHhh-hHhHHhhccCCCc--cccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 122 RFITGMAIGMSSA-CYVYVAEICLPND--RGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 122 R~l~G~g~g~~~~-~~~~i~e~~~~~~--r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
|+++|+|.|...+ ..+++.|++|+++ |..+.++++.+.++|..+||.+++++ |||+.|++.++..++..+
T Consensus 119 ~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 119 MATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred HHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 9999999999999 8999999998654 45688888999999999999999888 899999998765554443
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=5.5e-19 Score=183.87 Aligned_cols=359 Identities=9% Similarity=-0.074 Sum_probs=222.3
Q ss_pred hhccccccccccccccccCCCcccccCccchhHH--HHHHHHHhhHhhhHHHH-hhhhhcCchhhhhhhhHH-HHHHHHH
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWI--ASLGVISTPVGSLFAGI-FMDLLGRKTTVQLTAIPF-IIGWTII 109 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i--~s~~~l~~~i~~~~~g~-l~Dr~Grr~~l~~~~~l~-~~~~~~~ 109 (607)
+.-|+..++..+.+|...+ |.|.|.+++|++ .+...+...+.++++++ ..||+||||..++.+.+. .......
T Consensus 11 ~~~g~~~~~~~p~lp~~l~---~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~ 87 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLR---EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASL 87 (390)
T ss_pred HHHHhHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHH
Confidence 4445555666777788877 889999999997 46667888788888854 799999999976655332 2222222
Q ss_pred H-h--ccc-hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHH
Q psy10231 110 T-V--SKG-FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSA 180 (607)
Q Consensus 110 a-~--a~~-~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~ 180 (607)
+ + ..+ ..+++..-++.++..+...+ .-++..|..++++++...+....+..+|.++|+.....+ +||..|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~ 167 (390)
T TIGR02718 88 ALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFL 167 (390)
T ss_pred HcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 2 1 222 33445555666677777777 778888888888888888888888888999888655544 9999999
Q ss_pred HhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCccc
Q psy10231 181 ACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGY 260 (607)
Q Consensus 181 ~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~ 260 (607)
+.++..++..+..+
T Consensus 168 ~~a~l~~~~~~~~~------------------------------------------------------------------ 181 (390)
T TIGR02718 168 LVACVPLASLVCVL------------------------------------------------------------------ 181 (390)
T ss_pred HHHHHHHHHHHHHH------------------------------------------------------------------
Confidence 98888776555221
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHH
Q psy10231 261 LSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAEL 340 (607)
Q Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 340 (607)
+..||.++ +++.++
T Consensus 182 -------------------------------------------~~~~~~~~----~~~~~~------------------- 195 (390)
T TIGR02718 182 -------------------------------------------WLKDRAVA----SPEAPL------------------- 195 (390)
T ss_pred -------------------------------------------HcCCCCcC----ccccch-------------------
Confidence 11222110 000000
Q ss_pred HHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHH-HHH
Q psy10231 341 KEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVA-GLR 418 (607)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~-~~~ 418 (607)
....+.++.+|+|..+......+. .. ........+.+.++++.|.+.+ .+......+ ...
T Consensus 196 -------------~~~~~~~~~l~~~~~~~~~~~~~l-~~----~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~ 257 (390)
T TIGR02718 196 -------------ARRASLFRFFRRPLAWSLLALALL-SA----MTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTV 257 (390)
T ss_pred -------------hhHHHHHHHHcCcCHHHHHHHHHH-HH----HHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHH
Confidence 000123456777765443332222 21 1234445566777777777654 344444444 355
Q ss_pred HHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHH-HHHHHhccchhhhhhhc
Q psy10231 419 FFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILAN-VCASMLGMLQLPWVMIA 497 (607)
Q Consensus 419 ~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 497 (607)
+++.++.+++.||+|+|+.+..+..+.++..+......... .............+ ....+.. .+..+....
T Consensus 258 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 329 (390)
T TIGR02718 258 LLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFW-------LAPGIAVAWSCSAFGSLITGIT-SVAIYTAFM 329 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc-------cCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 67788999999999999988876655533322221110000 01111111111111 1112222 233334544
Q ss_pred cccCc-cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 498 ELFPL-SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 498 e~~p~-~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
+..++ +.+++.+++.+.+.+++..++|.+.|.+.+..|+...|...+.+.+++.++
T Consensus 330 ~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 330 RFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 55554 889999999999999999999999999999999887887777666665443
No 98
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.4e-18 Score=167.06 Aligned_cols=356 Identities=14% Similarity=0.163 Sum_probs=255.1
Q ss_pred HHHhhhcccccc----ccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHH
Q psy10231 30 IGKLHCNNLTHA----IPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIG 105 (607)
Q Consensus 30 ~~~~~~~~~~~~----~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~ 105 (607)
+..+.+.+++.- ..+++++++.+ |+|+|.+..|++.+...+...+.+++..+++.|+|.++.+..++++..++
T Consensus 14 i~gIvlia~NLR~~itsvgPLL~~Ir~---~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 14 LAGIVLIAFNLRPAITSVGPLLDEIRQ---DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred HHHHHHHHhccchhhhhhhhhHHHHHH---HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344555666543 34566666666 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHH
Q psy10231 106 WTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTS 179 (607)
Q Consensus 106 ~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f 179 (607)
.++-... +.+.++.+-.+.|.|.+.... .+..+-+.+|+ +-+..++++....++|..+++.+.-.+ +||...
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9998877 888999999999999999999 99999999974 558899999988888888877666555 799999
Q ss_pred HHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcc
Q psy10231 180 AACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRG 259 (607)
Q Consensus 180 ~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~ 259 (607)
.+-+.++++.++.
T Consensus 169 ~~WAl~allAl~~------------------------------------------------------------------- 181 (395)
T COG2807 169 GFWALLALLALLI------------------------------------------------------------------- 181 (395)
T ss_pred HHHHHHHHHHHHH-------------------------------------------------------------------
Confidence 9988888877662
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhH
Q psy10231 260 YLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAE 339 (607)
Q Consensus 260 ~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 339 (607)
++|...|. + .
T Consensus 182 ---------------------------------------------WlPq~~r~-----~-~------------------- 191 (395)
T COG2807 182 ---------------------------------------------WLPQALRE-----Q-A------------------- 191 (395)
T ss_pred ---------------------------------------------Hhhhcccc-----c-c-------------------
Confidence 11211000 0 0
Q ss_pred HHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHH
Q psy10231 340 LKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLR 418 (607)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 418 (607)
+..+....+-.+++|+|.-|. ..+++-.+...+|....|+|.++.+.|.+.. ++....+..+..
T Consensus 192 ----------~~~~~~~~~~~~vw~~~~aW~-----vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~ 256 (395)
T COG2807 192 ----------ASIATKLVSVRKVWRSPLAWQ-----VTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQ 256 (395)
T ss_pred ----------cccccccccccccccCchhHH-----HHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHH
Confidence 001111222334677776554 2233444555689999999999999999664 677888888999
Q ss_pred HHHHHHHhHhhccc-CCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhc
Q psy10231 419 FFMAIIGSACIQMF-SRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIA 497 (607)
Q Consensus 419 ~~~~~~~g~l~d~~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (607)
++.++....+.+|. ++|+........+.++.+.+.+ .+. ...+.-.++.+.+. .+.+++....+.
T Consensus 257 ~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~---~P~----------~~~~lw~~llG~G~-G~~F~laL~li~ 322 (395)
T COG2807 257 LPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL---APG----------QLPILWALLLGLGQ-GGAFPLALTLIL 322 (395)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH---hhh----------hHHHHHHHHHhCcc-chHHHHHHHHHH
Confidence 99999999999875 4566666666666666665543 111 11111122222222 223444444444
Q ss_pred cc-cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhh
Q psy10231 498 EL-FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQA 556 (607)
Q Consensus 498 e~-~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 556 (607)
.- -.++..+.-.|+.+.++++-...+|.++|.+.|..| |...+..+....++..+..+.
T Consensus 323 ~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 323 LRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 33 344566778889999999999999999999999876 555666666666655555443
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=8.1e-19 Score=182.44 Aligned_cols=378 Identities=12% Similarity=0.083 Sum_probs=235.5
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh----hhcCchhhhhh-hhHHHHHHHHHHhccchh--
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD----LLGRKTTVQLT-AIPFIIGWTIITVSKGFT-- 116 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D----r~Grr~~l~~~-~~l~~~~~~~~a~a~~~~-- 116 (607)
.+.++.+.+ ++|.+..+.+++..+..+...+.+++.|+++| |+|||+.++++ .+...++.++.++++++.
T Consensus 24 ~~~l~~yl~---~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~ 100 (477)
T TIGR01301 24 LSLLTPYVQ---ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHL 100 (477)
T ss_pred HHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhh
Confidence 344444445 78999999999999999999999999999999 59999998874 666667777777877653
Q ss_pred ---------------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCcc--ccccchhhHHHHHHHHHHHHHhhhh-----
Q psy10231 117 ---------------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDR--GYLSAFGPVFVSLGVLIVYSLGYIV----- 173 (607)
Q Consensus 117 ---------------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~ig~~l~~~l----- 173 (607)
.++++-.+..++.+...+ ..+++.|.+|+++| +.+.++.+.+.++|.++|+.+++..
T Consensus 101 ~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~ 180 (477)
T TIGR01301 101 FGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKI 180 (477)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 223333344558888888 99999999998865 6899999999999999999988764
Q ss_pred --------------hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhc
Q psy10231 174 --------------TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAI 239 (607)
Q Consensus 174 --------------~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (607)
+.|+.|++.++..++..+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l------------------------------------------------ 212 (477)
T TIGR01301 181 FPFTKTEACGVSCANLKSCFLIDIILLAILTY------------------------------------------------ 212 (477)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHH------------------------------------------------
Confidence 234445444444333333
Q ss_pred chhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCCh
Q psy10231 240 GMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCT 319 (607)
Q Consensus 240 g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~ 319 (607)
+..+.++|.|.. ..++.
T Consensus 213 -------------------------------------------------------------~t~~~v~E~~~~--~~~~~ 229 (477)
T TIGR01301 213 -------------------------------------------------------------IALSAVKENPLI--GSDDF 229 (477)
T ss_pred -------------------------------------------------------------HHeeeeeccCCC--ccccc
Confidence 234445554310 00000
Q ss_pred HHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhc----cCcchHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy10231 320 KEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFT----NSAVWKPFFILIGFFLFQEASGMYIVLYYAV 395 (607)
Q Consensus 320 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (607)
++ + +.++.+ +.+....++++++ -|+..+++. +..++.+.+...+..|..
T Consensus 230 ~~--~---~~~~~~------------------~~~~~~~~~~i~~~~~~mP~~m~~l~----~vqffsW~a~f~~~~y~T 282 (477)
T TIGR01301 230 IN--S---EAAPPS------------------KHGEEAFFGELFGAFKYLPRPVWILL----LVTCLNWIAWFPFILFDT 282 (477)
T ss_pred hh--h---hccccc------------------ccchhhhHHHHHHHHHHCCHHHHHHH----HHHHHHHHHHHHHHHhcc
Confidence 00 0 000000 0000011122222 233233232 333344445677777777
Q ss_pred HHHHHh--CCCc--c---------hHHHHHHHHHHHHHHHHHHhHhhcccCC-chhHHHhhHHHHHHHHHHhhhhhhhcc
Q psy10231 396 NFFEDA--GSSL--D---------DYVASIIVAGLRFFMAIIGSACIQMFSR-RALATTSAFFMALSMGISGTYEYYFSE 461 (607)
Q Consensus 396 ~~~~~~--g~~~--~---------~~~~~~~~~~~~~~~~~~~g~l~d~~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~ 461 (607)
.+..+. +.+. + ..+.....++...+.+++..++.+|+|+ |+....+.++.+++++...+......+
T Consensus 283 ~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~ 362 (477)
T TIGR01301 283 DWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKN 362 (477)
T ss_pred HHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 776532 2111 1 1234455556666777788889999985 666678877777777666543221110
Q ss_pred c-c-------CCCCCC-ChHHHHHHHHHHHHHHhccchhhhhhhccccCc--cchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 462 L-S-------MDDRPL-NWIPLACILANVCASMLGMLQLPWVMIAELFPL--SVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 462 ~-~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
. . ...... .+..+......+... .....++++++++..|+ +..|..+|+.|.+..+...+.....|.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~-A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~ 441 (477)
T TIGR01301 363 SRYYDGDGESLPPPTGIKASALIVFAILGIPL-AITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPW 441 (477)
T ss_pred cccccccccccCcchhhHHHHHHHHHHhhHHH-HHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000000 133333333333333 34467788999999985 4459999999999999999999888886
Q ss_pred HHhhh--hHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 531 MYLLN--MGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 531 ~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.+..| ....+.+-++.+++++++.++.+|+++.
T Consensus 442 ~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 442 DQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 66655 3336667777788888888888898764
No 100
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.80 E-value=2.4e-16 Score=164.72 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=114.6
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-cCchhhhhhhhHHHHHHHHHHhcc-chhHHHHHHHHHhhhhhhHh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLL-GRKTTVQLTAIPFIIGWTIITVSK-GFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-Grr~~l~~~~~l~~~~~~~~a~a~-~~~~l~~~R~l~G~g~g~~~ 133 (607)
++|.++.+.+.+.+.+.....++.+++|+++||+ |||++++++.++..++.++.+... +...+.++..+.++|.|...
T Consensus 39 ~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~ 118 (493)
T PRK15462 39 QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFK 118 (493)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccccc
Confidence 7899999999999999999999999999999999 999999999999999988777643 23334555555667777777
Q ss_pred h-hHhHHhhccCCC--ccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 134 A-CYVYVAEICLPN--DRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 134 ~-~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
+ ..+++.|.+|++ +|....++...+.++|..++|.+.+++ |||+.|.+.++..++..+
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 8 889999999976 799999999999999999999999888 899999987664444333
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.80 E-value=1.2e-16 Score=164.33 Aligned_cols=361 Identities=13% Similarity=0.068 Sum_probs=231.4
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhc-CchhhhhhhhHHHHHHHHHHhccchhH
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLG-RKTTVQLTAIPFIIGWTIITVSKGFTL 117 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~G-rr~~l~~~~~l~~~~~~~~a~a~~~~~ 117 (607)
..+...+.+|..-+ +.+.|..|+|.+.+...+...++++++|.++||.+ +|+.+.+..++.++........++++.
T Consensus 17 ~~G~~~p~~~~~L~---~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~ 93 (400)
T PF03825_consen 17 AYGAFLPYLPLYLE---SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWW 93 (400)
T ss_pred HHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34444444555445 78899999999999999999999999999999986 577887888888887777788899999
Q ss_pred HHHHHHHHhhhhhhHhh-hHhHHhhccCC--CccccccchhhHHHHHHHHH-HHHHhhhhhH---HHHHHHhHHHHHHHH
Q psy10231 118 LCVGRFITGMAIGMSSA-CYVYVAEICLP--NDRGYLSAFGPVFVSLGVLI-VYSLGYIVTW---QYTSAACAVVALVGF 190 (607)
Q Consensus 118 l~~~R~l~G~g~g~~~~-~~~~i~e~~~~--~~r~~~~~~~~~~~~lG~~i-g~~l~~~l~W---r~~f~~~~~~~~~~~ 190 (607)
+++.-++..+......| .-++..+...+ ++-|+.-.+-..++.++... +..+.+..++ ...+++.+..+++..
T Consensus 94 ~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~ 173 (400)
T PF03825_consen 94 LFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA 173 (400)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH
Confidence 99988888888888888 88888887753 22255554445555544332 1222332222 234444444443333
Q ss_pred HHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHH
Q psy10231 191 AAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVS 270 (607)
Q Consensus 191 ~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~ 270 (607)
..
T Consensus 174 ~~------------------------------------------------------------------------------ 175 (400)
T PF03825_consen 174 GF------------------------------------------------------------------------------ 175 (400)
T ss_pred HH------------------------------------------------------------------------------
Confidence 32
Q ss_pred HHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHh
Q psy10231 271 LGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQ 350 (607)
Q Consensus 271 ~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (607)
.+.+|+.|. ++.. ++..
T Consensus 176 --------------------------------~l~lp~~~~---~~~~-~~~~--------------------------- 192 (400)
T PF03825_consen 176 --------------------------------ALFLPKTPP---KRSA-KESV--------------------------- 192 (400)
T ss_pred --------------------------------HHhCCCCcc---cccc-CCCc---------------------------
Confidence 223344331 0000 0000
Q ss_pred hcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhC-CCcc-hHHHHHHHHHHHHHHHHHHhHh
Q psy10231 351 MAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAG-SSLD-DYVASIIVAGLRFFMAIIGSAC 428 (607)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~-~~~~~~~~~~~~~~~~~~~g~l 428 (607)
++....+..+++|+|+...-++..+.. .........|.+.++++.| .+.+ ......+..+..++.-...+++
T Consensus 193 -~~~~~~~~~~llk~~~~~~Fll~~~l~-----~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~ 266 (400)
T PF03825_consen 193 -KKLLGLDALKLLKNPRFLVFLLAAFLI-----GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRF 266 (400)
T ss_pred -ccccchHHHHHhcCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011112334678887655422222222 2234566777888888877 4333 4545556667888999999999
Q ss_pred hcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHH----HHHHHHHHhccchhhhhhhccccCccc
Q psy10231 429 IQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACI----LANVCASMLGMLQLPWVMIAELFPLSV 504 (607)
Q Consensus 429 ~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~p~~~ 504 (607)
..|+|.|+++..+....++=..+++... ++.+...... .+.+..++... .....++.+..|++.
T Consensus 267 ~~r~g~~~ll~~a~~~~~vR~~l~a~~~-----------~~~~~~~~~~~l~q~lhG~tf~~~~-~a~~~yi~~~~p~~~ 334 (400)
T PF03825_consen 267 LKRFGIKWLLLLALVAYAVRWLLYAYFS-----------DPWPFIVALQLLGQLLHGLTFGLFH-AASVRYIDRIAPPEL 334 (400)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhc-----------CCcHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHhCCccc
Confidence 9999999999999998888887776520 1222222211 12333333332 334488999999999
Q ss_pred hhhHHHHHHHHH-HHHHHHHhhhcHHHHHhhhhHH------HHHHHHHHHHHHHHHhhhcccCC
Q psy10231 505 RGIMGGIVCSLG-YLFIFTTVKMYPDLMYLLNMGG------MMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 505 r~~~~g~~~~~~-~~~~~i~~~i~~~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
|++++++.+... .+|..++..+.|.+.|..|... .+.+.+++.++..++.+++.+|+
T Consensus 335 ~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 335 RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999988764 5899999999999999876543 44455555555555555555544
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=1.4e-17 Score=177.45 Aligned_cols=112 Identities=13% Similarity=0.239 Sum_probs=87.6
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhh----hhcC-chhhhhhhhHHHHHHHHHHhccc------hhHHHHHHHH
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMD----LLGR-KTTVQLTAIPFIIGWTIITVSKG------FTLLCVGRFI 124 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D----r~Gr-r~~l~~~~~l~~~~~~~~a~a~~------~~~l~~~R~l 124 (607)
.++++..++|.+..+.-+.-++..++.|.++| |+|| |+.++.+.+..+++.+++-..++ +..+++.-++
T Consensus 36 v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l 115 (473)
T PRK10429 36 VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYIL 115 (473)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Confidence 67999999999999999999999999999999 6799 45556677777777655544332 3455666777
Q ss_pred HhhhhhhHhh-hHhHHhhcc-CCCccccccchhhHHHHHHHHHHH
Q psy10231 125 TGMAIGMSSA-CYVYVAEIC-LPNDRGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 125 ~G~g~g~~~~-~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~ig~ 167 (607)
.+++.....+ -.++..|+. ++++|.+..+.-..+.++|..+.+
T Consensus 116 ~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~ 160 (473)
T PRK10429 116 WGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA 160 (473)
T ss_pred HHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888 888999998 588999988886666666655543
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.76 E-value=3.4e-17 Score=173.36 Aligned_cols=364 Identities=12% Similarity=0.036 Sum_probs=222.1
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhc-----CchhhhhhhhHHH-HHH
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLG-----RKTTVQLTAIPFI-IGW 106 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~G-----rr~~l~~~~~l~~-~~~ 106 (607)
.+.-|+.......+.|.+++ ++|++.++++...+...+...+-.+ +|+++||++ ||+.++++.++.. ++.
T Consensus 35 y~~qGl~~l~~~~~~~~l~~---~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~ 110 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTD---DLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILY 110 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHH
Confidence 34556652234566677777 8999999999999999999999666 999999998 7777777777663 433
Q ss_pred HHHHhccchhHHH-HHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHH---HHHHHHHHHHHhhhh----hHHH
Q psy10231 107 TIITVSKGFTLLC-VGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVF---VSLGVLIVYSLGYIV----TWQY 177 (607)
Q Consensus 107 ~~~a~a~~~~~l~-~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~---~~lG~~ig~~l~~~l----~Wr~ 177 (607)
...+..++..... +.+++.+++.+...+ +-++..|..+ +++....+..... .++|.++++.+++.+ +||.
T Consensus 111 ~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~ 189 (468)
T TIGR00788 111 GLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRI 189 (468)
T ss_pred HhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcch
Confidence 3334445544444 489999999999999 9999999998 5554444344333 347888887777766 8999
Q ss_pred HHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCC
Q psy10231 178 TSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPND 257 (607)
Q Consensus 178 ~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~ 257 (607)
.|++.+++.++..+..+++||.+....++.+
T Consensus 190 ~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~------------------------------------------------- 220 (468)
T TIGR00788 190 LFLITAALLLLQLFVSNLSKERRAFVRPRIG------------------------------------------------- 220 (468)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccc-------------------------------------------------
Confidence 9999888877765544555554210000000
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhh
Q psy10231 258 RGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVAD 337 (607)
Q Consensus 258 r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~ 337 (607)
.++.... . ....
T Consensus 221 -------------------------------------------------------------~~~~~~~-~------~~~~ 232 (468)
T TIGR00788 221 -------------------------------------------------------------TYLEMNM-A------LLTL 232 (468)
T ss_pred -------------------------------------------------------------ccchhhh-h------hhhh
Confidence 0000000 0 0000
Q ss_pred hHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHH
Q psy10231 338 AELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAG 416 (607)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~ 416 (607)
...+.. .+...+.++.+++|..++.+...++........ .....++.+ ...|.+.. .+......++
T Consensus 233 ~~~~~~---------~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~-~~~~f~~~~---~~lG~s~~~~G~~~~~~~v 299 (468)
T TIGR00788 233 GVLANV---------KVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA-SGSVFCATT---QCLPGGPSFSGMSKVVGNL 299 (468)
T ss_pred hHHHHH---------HHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC-CceeEEEEc---ccCCCCcchhhhHHHHHHH
Confidence 000000 000112334455665554333222211111110 000001111 23455443 5666777788
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCC-CCChHHHHHHHHHHHHHHhccchhhhhh
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDR-PLNWIPLACILANVCASMLGMLQLPWVM 495 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (607)
+.+++..+.+++.+|++.|+.+..+.++.+++............ .... ...+.......+.....+....+. ..+
T Consensus 300 ~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~---~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~ 375 (468)
T TIGR00788 300 GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWN---LAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVL 375 (468)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccc---cccCCCCeeeeeehhHHHHHHHHHHHccH-HHH
Confidence 89999999999999999999988888877776644322111110 0000 112223333334444444555454 588
Q ss_pred hccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh
Q psy10231 496 IAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN 535 (607)
Q Consensus 496 ~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g 535 (607)
+.+..|++.+|+..++.+.+.++|..+++.+.+.+.+..|
T Consensus 376 ~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 376 LARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999988877
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.76 E-value=4e-17 Score=172.71 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=93.8
Q ss_pred cccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh----hcCch-hhhhhhhHHHHHHHHHHhccc-----
Q psy10231 45 ILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL----LGRKT-TVQLTAIPFIIGWTIITVSKG----- 114 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr----~Grr~-~l~~~~~l~~~~~~~~a~a~~----- 114 (607)
.+.+.+.+ ++|++..+.|.+.++..+..++..++.|.++|| +|||| .++.+.+..+++.++....++
T Consensus 31 ~l~~~~t~---~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 31 FLAYFYTD---VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHH---hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 34455566 899999999999999999999999999999998 88855 455677777777766555543
Q ss_pred -hhHHHHHHHHHhhhhhhHhh-hHhHHhhcc-CCCccccccchhhHHHHHHHHHHHHH
Q psy10231 115 -FTLLCVGRFITGMAIGMSSA-CYVYVAEIC-LPNDRGYLSAFGPVFVSLGVLIVYSL 169 (607)
Q Consensus 115 -~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~ig~~l 169 (607)
+..+++..++.+.+...... -.++..|+. ++++|++..+....+..+|..+++.+
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667777777666666 778999998 46789988888877777777766543
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=5.9e-16 Score=156.12 Aligned_cols=189 Identities=12% Similarity=0.024 Sum_probs=126.3
Q ss_pred hhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc----c-hHHHHHHHHHHHHHHHHHHhHhhccc
Q psy10231 358 HCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL----D-DYVASIIVAGLRFFMAIIGSACIQMF 432 (607)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~-~~~~~~~~~~~~~~~~~~~g~l~d~~ 432 (607)
+..+++|+|++|.-.+........ +..+-...+.|+...-.+. . -+.....-.+..++...+..++.+|+
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~-----Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri 286 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAI-----YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI 286 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcchhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445677888776533333322222 3444444555555432221 1 23345555667788888999999999
Q ss_pred CCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHH
Q psy10231 433 SRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIV 512 (607)
Q Consensus 433 grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 512 (607)
|.|+.++++..++.+-.+..++. +..+.+...=.+-..-+.... ....-|+.+.+|++..++...+.
T Consensus 287 g~k~~Lllag~i~~iRi~~~~~~------------~~~~~i~~~klLH~~e~~l~l-va~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 287 GAKNLLLLAGVIMAIRIIGSGFA------------TNPWVISLIKLLHALEFPLLL-VAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHT--------------SHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS-GGGHHHHHHHH
T ss_pred ChHhHHHHHHHHHHHHHHHHhhh------------cchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHhHHHHHHHHH
Confidence 99999999999999988888762 223333333333333333322 23448999999999999988885
Q ss_pred -HHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q psy10231 513 -CSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGK 564 (607)
Q Consensus 513 -~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (607)
+...+++..+.+.+.|.+.|+.|++..+++.+.+.++..++..+.+++.+++
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 5777899999999999999999999999999999888888888877665543
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.71 E-value=7e-16 Score=163.52 Aligned_cols=331 Identities=11% Similarity=0.025 Sum_probs=187.0
Q ss_pred ccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh----cCchhh-hhhhhHHHHHHHHHH-h----ccc-
Q psy10231 46 LIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL----GRKTTV-QLTAIPFIIGWTIIT-V----SKG- 114 (607)
Q Consensus 46 ~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~----Grr~~l-~~~~~l~~~~~~~~a-~----a~~- 114 (607)
+.+.+.+ .+|++..++|.+.+...+..++..++.|+++||. ||||.. +.+.+...+.+++.- . +++
T Consensus 31 l~~y~~~---~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (448)
T PRK09848 31 LLSYYTD---VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSS 107 (448)
T ss_pred HHHHHHH---HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcch
Confidence 3345555 7899999999999999999999999999999986 777755 555555554444432 1 111
Q ss_pred -hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC-CccccccchhhHHHH-----HHHHHHHHHhhhhh-H-HHHHHHhHH
Q psy10231 115 -FTLLCVGRFITGMAIGMSSA-CYVYVAEICLP-NDRGYLSAFGPVFVS-----LGVLIVYSLGYIVT-W-QYTSAACAV 184 (607)
Q Consensus 115 -~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~-~~r~~~~~~~~~~~~-----lG~~ig~~l~~~l~-W-r~~f~~~~~ 184 (607)
...+++.-++.+++.+...+ ..++..|+... ++|.+..+.-..+.+ +|..++|.++...+ . ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~------- 180 (448)
T PRK09848 108 KVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVS------- 180 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh-------
Confidence 23344556777888888887 77777777764 678776655544333 33334444333210 0 00
Q ss_pred HHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccch
Q psy10231 185 VALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAF 264 (607)
Q Consensus 185 ~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~ 264 (607)
T Consensus 181 -------------------------------------------------------------------------------- 180 (448)
T PRK09848 181 -------------------------------------------------------------------------------- 180 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 265 GPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 265 ~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
....|+... ..+..+..++.....||++. + +.+
T Consensus 181 ----------------~~~~~~~~~--~v~~~~~~~~~~~~~~e~~~----~-~~~------------------------ 213 (448)
T PRK09848 181 ----------------VYHFWTIVL--AIAGMVLYFICFKSTRENVV----R-IVA------------------------ 213 (448)
T ss_pred ----------------hHHHHHHHH--HHHHHHHHHHHHcCcEeccC----C-Ccc------------------------
Confidence 001111100 00001111122334455321 0 000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcchHHH-HHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLDDYVA-SIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~ 422 (607)
+....+.++++++++.++...+..++. ..+......+.+.++++ .|.+...... .....+..+++.
T Consensus 214 -------~~~~~~~~~~l~~n~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 281 (448)
T PRK09848 214 -------QPSLKISLQTLKRNRPLFMLCIGALCV-----LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA 281 (448)
T ss_pred -------CCCHHHHHHHHhCCchHHHHHHHHHHH-----HHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH
Confidence 000112345567777654422222222 22233444455555543 2433222222 222345567788
Q ss_pred HHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc
Q psy10231 423 IIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL 502 (607)
Q Consensus 423 ~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 502 (607)
++.+++.||+|+|+.+..+..+..++.+.+.+. .....+.......+...+.+. ..+..+++..|..|.
T Consensus 282 ~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~----------~~~~~~~~~~~~~l~g~G~~~-~~~~~~al~~~~~~~ 350 (448)
T PRK09848 282 PLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV----------SVWSLPVALVALAIASIGQGV-TMTVMWALEADTVEY 350 (448)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc----------CchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh
Confidence 999999999999999998887777766555431 111222222223333333322 345556777777764
Q ss_pred c-------chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 503 S-------VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 503 ~-------~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
+ .+|...|+.+....+|..+++.+.+.+.+..|+
T Consensus 351 ~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 351 GEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3 459999999999999999999999988876554
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.71 E-value=4.6e-16 Score=163.82 Aligned_cols=332 Identities=16% Similarity=0.178 Sum_probs=222.8
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh----hhcCchhhh-hhhhHHHHHHHHHHhc-c----
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD----LLGRKTTVQ-LTAIPFIIGWTIITVS-K---- 113 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D----r~Grr~~l~-~~~~l~~~~~~~~a~a-~---- 113 (607)
..+.+...+ .+++++...|.+.....+-.++..++.|.++| |+||||..+ ++.++.+++.+++... +
T Consensus 22 ~~~~~f~~~---~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~ 98 (428)
T PF13347_consen 22 SYLLYFYTD---VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS 98 (428)
T ss_pred HHHHHHHHH---HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh
Confidence 344555666 77999999999999999999999999999999 899876655 5778888877777766 4
Q ss_pred ---chhHHHHHHHHHhhhhhhHhh-hHhHHhhccC-CCccccccchhhHHHHHHHHHHHHHhhhh-----------hHHH
Q psy10231 114 ---GFTLLCVGRFITGMAIGMSSA-CYVYVAEICL-PNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----------TWQY 177 (607)
Q Consensus 114 ---~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----------~Wr~ 177 (607)
....+.+.-++..++...... -.++..|+.+ +++|.+..+.-..+..+|.++...+...+ +|++
T Consensus 99 ~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~ 178 (428)
T PF13347_consen 99 FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRW 178 (428)
T ss_pred hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHH
Confidence 234457777777888888888 8999999998 57899999998888888886554444332 3666
Q ss_pred HHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCC
Q psy10231 178 TSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPND 257 (607)
Q Consensus 178 ~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~ 257 (607)
..++.+++.++..+
T Consensus 179 ~~~v~~iv~~v~~~------------------------------------------------------------------ 192 (428)
T PF13347_consen 179 MALVLAIVGLVFFL------------------------------------------------------------------ 192 (428)
T ss_pred HHHHHHHHHHHHhh------------------------------------------------------------------
Confidence 66665555554443
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhh
Q psy10231 258 RGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVAD 337 (607)
Q Consensus 258 r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~ 337 (607)
+..+..+|.++ +.++
T Consensus 193 -------------------------------------------i~~~~~ke~~~------~~~~---------------- 207 (428)
T PF13347_consen 193 -------------------------------------------ITFFFVKERSV------EVTE---------------- 207 (428)
T ss_pred -------------------------------------------hhhheeeeccc------cccc----------------
Confidence 23444555100 0000
Q ss_pred hHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcchHHHHHHHHH
Q psy10231 338 AELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLDDYVASIIVAG 416 (607)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 416 (607)
++++.+-.+.+++.+++|++++ ++....+..+. ......+.+.+.+. .+.+...........+
T Consensus 208 -----------~~~~~~~~~~~~~~~~nr~~~~-l~~~~~~~~~~----~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~ 271 (428)
T PF13347_consen 208 -----------QEKKISLRDSLRSLFRNRPFRI-LLLAFFLQWLA----FALMNTFLPYYFTYVLGNEGLISIFMLIFFV 271 (428)
T ss_pred -----------cccccccccchhhhcccchHHH-HHHHHHHHHhh----hhhhhhHHHHHHHHHhcCchhhHHHHHHHHH
Confidence 0011223345667777776554 33333232222 23333334444443 2433334555667778
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhh
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMI 496 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (607)
..+++.++.++++||+|+|+.+..+..+.+++.+.+.+... .+.+..+....+.+.+. .......+++.
T Consensus 272 ~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~l~gi~~-~~~~~~~~a~~ 340 (428)
T PF13347_consen 272 ASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP----------GSPWLVLILFILAGIGY-GAFFVIPWAML 340 (428)
T ss_pred HHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhHhhh-ccccccccccc
Confidence 88999999999999999999999998888887776655210 22333333333333333 33446677888
Q ss_pred ccccCc-------cchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 497 AELFPL-------SVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 497 ~e~~p~-------~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
+|..+. +..|...|+.+....++..+++.+.+.+.+..|+
T Consensus 341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 888763 3458899999999999999999999988876654
No 108
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.70 E-value=2.8e-14 Score=144.00 Aligned_cols=421 Identities=14% Similarity=0.083 Sum_probs=247.0
Q ss_pred ccccccccccccCC-CcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-cCchhhhhhhhHHHHHHHHHHhcc--ch
Q psy10231 40 HAIPSILIPQLQKP-SSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-GRKTTVQLTAIPFIIGWTIITVSK--GF 115 (607)
Q Consensus 40 ~~~~~~~~p~l~~~-~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-Grr~~l~~~~~l~~~~~~~~a~a~--~~ 115 (607)
+|+-+++.-.+... .+.++.|+++..-+.++|..-.=+..+++|+++||+ |+|+++..|.+++.+|-++.+.+. +.
T Consensus 38 YGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~ 117 (498)
T COG3104 38 YGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGP 117 (498)
T ss_pred hhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccc
Confidence 34444444444441 113669999988888888877778899999999996 999999999999999999999984 79
Q ss_pred hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCC--ccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHH
Q psy10231 116 TLLCVGRFITGMAIGMSSA-CYVYVAEICLPN--DRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALV 188 (607)
Q Consensus 116 ~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~ 188 (607)
..+.++-++.++|.|..=+ ...++.|.+|++ +|-..++++.++.++|++++|.+.+++ +|+..|.+.++-..+
T Consensus 118 ~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~ 197 (498)
T COG3104 118 GGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMII 197 (498)
T ss_pred cHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999964 467888999999999999999999988 999999988877666
Q ss_pred HHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHH
Q psy10231 189 GFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVF 268 (607)
Q Consensus 189 ~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~ 268 (607)
.++.....+..-.... ++++ ++.+.+..-.....
T Consensus 198 gl~~f~~~~r~~~~~~--~~~~--------------------------------------------~~~~~~~~~~~~~~ 231 (498)
T COG3104 198 GLVIFLLGRRHVKGIG--GVPD--------------------------------------------PNPLSFNFLLPVLG 231 (498)
T ss_pred HHHHHHHccchhcCCC--CCCC--------------------------------------------ccchhhhhhhhhHH
Confidence 6554322221100000 0000 00000000000111
Q ss_pred HHHHHHHHHHHHHHH---hhHHHHhhhHHHHHHHHhhhcc-ccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHH
Q psy10231 269 VSLGVLIVYSLGYIV---TWQYTSAACAVVALVGFAAMHA-VPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQ 344 (607)
Q Consensus 269 ~~~g~~~~~~~~~~~---~Wr~~~~~~~i~~~~~~~~~~~-~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 344 (607)
..+...+...+.... .|+....+..+...+..+...+ .++. .+|.++.+.
T Consensus 232 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~er~r~~~----------------- 285 (498)
T COG3104 232 GLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKV---------FDERRRLLA----------------- 285 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---------HHHHHHHHH-----------------
Confidence 111111111111122 2333333222222222221111 1110 011110000
Q ss_pred HHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH--hCCCcchHHHHHHHHHHHHHHH
Q psy10231 345 QSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED--AGSSLDDYVASIIVAGLRFFMA 422 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 422 (607)
..++++...+.+....-....+..|.....+. .|++..+.+.-.+..+.-++.+
T Consensus 286 ------------------------~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~ 341 (498)
T COG3104 286 ------------------------AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFS 341 (498)
T ss_pred ------------------------HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHH
Confidence 11122222222222222234455555554432 2344455566666666666667
Q ss_pred HHHhHhhcccCCc-------hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhh
Q psy10231 423 IIGSACIQMFSRR-------ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVM 495 (607)
Q Consensus 423 ~~~g~l~d~~grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (607)
++..++..|.+++ .-+-.+..++..+.+++........ .++...+....+...++....-....|+...+
T Consensus 342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~ 418 (498)
T COG3104 342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG---GPSGLVSVWWLVLSYVLQSFGELFISPVGLSM 418 (498)
T ss_pred HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 6666666663332 1233444555555554444211111 11223344445555566666677778888899
Q ss_pred hccccCccchhhHHHHHHHHHHHHHHHHhhhcHH------HHHhhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 496 IAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPD------LMYLLNMGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 496 ~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
+..+.|+...+..++........+..++..+.+. ..+.......|+.++...++..+......|
T Consensus 419 ~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 419 VTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999998877777777777666652 334444555777777777776666554433
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.70 E-value=5e-14 Score=147.78 Aligned_cols=366 Identities=13% Similarity=0.123 Sum_probs=216.2
Q ss_pred chhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhh-hhhHHHHHHHHHHhc--cchhHHHHHHHHHhhhhhhHhh-hHhH
Q psy10231 63 DASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQL-TAIPFIIGWTIITVS--KGFTLLCVGRFITGMAIGMSSA-CYVY 138 (607)
Q Consensus 63 ~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~-~~~l~~~~~~~~a~a--~~~~~l~~~R~l~G~g~g~~~~-~~~~ 138 (607)
-.++..++..+..++..++.|.++|+-|+||.++. ..++..+++.+..+. .+++...+.-++.-++.+.... -.++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677889999999999999999999987766554 555555667776664 3355555556666677788888 8999
Q ss_pred HhhccCCCcc--------------------------ccccchhhHHHHHHHHHHHHHhhhhhHHHHHHHhHHHHHHHHHH
Q psy10231 139 VAEICLPNDR--------------------------GYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 139 i~e~~~~~~r--------------------------~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f~~~~~~~~~~~~~ 192 (607)
+.|..+++++ ++..+.-.....+|.++.-.+.-.+
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~------------------- 211 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL------------------- 211 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 9999999888 7777776666666665543322211
Q ss_pred HhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHH
Q psy10231 193 MHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLG 272 (607)
Q Consensus 193 ~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g 272 (607)
+..++.. .+.
T Consensus 212 -~~~~~~~------~~~--------------------------------------------------------------- 221 (477)
T PF11700_consen 212 -VISPGST------ASN--------------------------------------------------------------- 221 (477)
T ss_pred -HHcCCCc------ccc---------------------------------------------------------------
Confidence 1111111 000
Q ss_pred HHHHHHHHHHHhhHHHHhhhHHH-HHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhh
Q psy10231 273 VLIVYSLGYIVTWQYTSAACAVV-ALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQM 351 (607)
Q Consensus 273 ~~~~~~~~~~~~Wr~~~~~~~i~-~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (607)
...-|..+.++++- .+..+...+++||.|+....+....-.+...+ +..+
T Consensus 222 ---------~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~--------------~l~~------ 272 (477)
T PF11700_consen 222 ---------TWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFK--------------RLWR------ 272 (477)
T ss_pred ---------chhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHH--------------HHHH------
Confidence 00012222222221 22333455666665431000000000111111 1111
Q ss_pred cCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcch-HHHHHHHHHHHHHHHHHHhHhh
Q psy10231 352 AGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLDD-YVASIIVAGLRFFMAIIGSACI 429 (607)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~ 429 (607)
.++++.+.| -+..+++..+....+.+.+......+.+ ..|++... ....+...+.+++|+++.+++.
T Consensus 273 ------t~k~~~~~~-----~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~ 341 (477)
T PF11700_consen 273 ------TFKEIRKLR-----QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQ 341 (477)
T ss_pred ------HHHHHHhCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222 1222334444445567777777777776 56886554 4567777889999999999999
Q ss_pred cccCCc--hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhh
Q psy10231 430 QMFSRR--ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGI 507 (607)
Q Consensus 430 d~~grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 507 (607)
||+|.| +.+..+.+...+..+ .+.+-..+.. ......+...+.... .+.+..+..+..-++.+|+.|+++.+.
T Consensus 342 ~r~g~k~~~~l~~~l~~~~~i~~-~g~~G~~~~~---~g~~~~~~f~~~a~~-~G~~~G~~qs~sRs~~~~LiP~g~e~e 416 (477)
T PF11700_consen 342 DRFGPKTKRTLLISLILWIIIPL-YGLFGFWPSF---FGLKSPWEFWVLAVL-IGLFMGGIQSASRSLFSRLIPPGREAE 416 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHH-HHHHHhhhcc---cCcccHHHHHHHHHH-HHHHhhhHHHHHHHHHHHhCCCchhhH
Confidence 999998 676665554422221 1111001100 001233333333333 333333445667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 508 MGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 508 ~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
-+|+....+...+.++|.+++.+.+..| .+..+....++.+++.++. ..++..|+
T Consensus 417 fFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g 472 (477)
T PF11700_consen 417 FFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKG 472 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhh
Confidence 9999999999999999999999999887 6667777777777766664 44444443
No 110
>KOG4686|consensus
Probab=99.69 E-value=4.2e-16 Score=143.72 Aligned_cols=364 Identities=14% Similarity=0.074 Sum_probs=218.3
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhhhHHHHHHHHHHh---ccchhHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTAIPFIIGWTIITV---SKGFTLL 118 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~~l~~~~~~~~a~---a~~~~~l 118 (607)
++.+.-+++. |.+++.++..++.+.|..--.+-++++|++.|| +|-|...++-+....++-++.+. ++.+|++
T Consensus 63 p~alq~~fk~---d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M 139 (459)
T KOG4686|consen 63 PGALQIDFKL---DSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTM 139 (459)
T ss_pred chhhhhhhhc---ccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 3445556666 888999999999999999999999999999995 78888777777777777777764 5889999
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHHHHHHHHHhcC
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVALVGFAAMHAV 196 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~~~~~~~~~~~ 196 (607)
..+||+.|+|.-.... -..|..-|+..|+-+.++++.....-+|+.+--.+.+++ +.-.-++-....+.+.+.
T Consensus 140 ~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~----- 214 (459)
T KOG4686|consen 140 LAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLW----- 214 (459)
T ss_pred HhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHH-----
Confidence 9999999999888888 889999999999999999999888888876654444433 111111100001111000
Q ss_pred CCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHH
Q psy10231 197 PETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 276 (607)
Q Consensus 197 pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~ 276 (607)
T Consensus 215 -------------------------------------------------------------------------------- 214 (459)
T KOG4686|consen 215 -------------------------------------------------------------------------------- 214 (459)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCcc
Q psy10231 277 YSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSM 356 (607)
Q Consensus 277 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (607)
-..-......+++-....-+. +++++..+.+- |....+.
T Consensus 215 ---------l~~~~~tc~~slical~lg~~------------D~rAerilh~e--------------------~g~~Ge~ 253 (459)
T KOG4686|consen 215 ---------LCFEVKTCKQSLICALSLGLS------------DDRAERILHLE--------------------EGFLGEE 253 (459)
T ss_pred ---------HHHHHHHHHHHHHHHHHhhhh------------hhHHHHHHhhh--------------------cCcccCC
Confidence 000000000000000000000 01111111100 0001111
Q ss_pred chhhhhhc-cCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccC
Q psy10231 357 DHCAQTFT-NSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFS 433 (607)
Q Consensus 357 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g 433 (607)
....+... .|.+|....++. +.. .....+....|.++++ .|++.. ++.+.........+.+++.|.++||+|
T Consensus 254 pkLtdv~~f~ppfw~~~iicv-~yy----va~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G 328 (459)
T KOG4686|consen 254 PKLTDVNTFYPPFWVLVIICV-LYY----VAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYG 328 (459)
T ss_pred cccccccccCccHHHHHHHHH-HHH----HHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhc
Confidence 11111111 233343222222 222 1256667777888865 477554 455556666677888999999999999
Q ss_pred CchhHHHhhHHHHHHH-HHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHH
Q psy10231 434 RRALATTSAFFMALSM-GISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIV 512 (607)
Q Consensus 434 rr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 512 (607)
++-..+.+..+..+.. .++.+.+ .+.+. .+.+.+..+.. .....|..++-+.|+++-|++.|..
T Consensus 329 ~n~~wv~~a~~~tl~~H~~l~Ft~-----------lsPy~---~m~~lGLsysl-lAcslWP~va~~vpE~qLGTaygf~ 393 (459)
T KOG4686|consen 329 FNLWWVASACILTLLGHSGLFFTF-----------LSPYT---SMTFLGLSYSL-LACSLWPCVASLVPEEQLGTAYGFI 393 (459)
T ss_pred ceehhHHHHHHHHHHHhhhHHhhh-----------ccHHH---HHHHHhhhHHH-HHHHHhhhhhhhCCHHHhcchHHHH
Confidence 9988777665554433 2333211 11222 22222222221 1233456778888999999999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHhhhh----HHHHHHHHHHHHHHHHHhh
Q psy10231 513 CSLGYLFIFTTVKMYPDLMYLLNM----GGMMWAFSCACLLAMVFIQ 555 (607)
Q Consensus 513 ~~~~~~~~~i~~~i~~~l~~~~g~----~~~~~~~~~~~~~~~~~~~ 555 (607)
+.+.++|-.+.|++.|.+.|.-|. ...|.....+++.+..+.+
T Consensus 394 qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 394 QSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999987652 2233444444444444433
No 111
>PRK11462 putative transporter; Provisional
Probab=99.68 E-value=1.2e-14 Score=153.74 Aligned_cols=115 Identities=14% Similarity=0.137 Sum_probs=93.2
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhh----hcCchhhh-hhhhHHHHHHHHHHhccc------hhHHHHHHHH
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDL----LGRKTTVQ-LTAIPFIIGWTIITVSKG------FTLLCVGRFI 124 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr----~Grr~~l~-~~~~l~~~~~~~~a~a~~------~~~l~~~R~l 124 (607)
.++++...+|.+..+.-+--++.-|+.|.++|| +||||..+ ++.+..+++.+++-..++ +..+.+.-++
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~ 118 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTL 118 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHH
Confidence 789999999999999999999999999999995 79976555 576777777766654543 3456666777
Q ss_pred HhhhhhhHhh-hHhHHhhccC-CCccccccchhhHHHHHHHHHHHHHh
Q psy10231 125 TGMAIGMSSA-CYVYVAEICL-PNDRGYLSAFGPVFVSLGVLIVYSLG 170 (607)
Q Consensus 125 ~G~g~g~~~~-~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~ 170 (607)
..++...... -.++..|+.+ +++|++..++...+..+|..+++.+.
T Consensus 119 ~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 119 LTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888 8899999988 78899999999988888877765554
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.64 E-value=8.9e-14 Score=139.06 Aligned_cols=287 Identities=14% Similarity=0.070 Sum_probs=174.9
Q ss_pred HhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHHH
Q psy10231 110 TVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVAL 187 (607)
Q Consensus 110 a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~~ 187 (607)
+...+|..++++-++.|.|.+...+ ...++++..+++++++.+++.+..+++|..++|.++..+ ...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~----------- 73 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSG----------- 73 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC-----------
Confidence 3557899999999999999999999 999999999999999999999999999999999988743 000
Q ss_pred HHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhH
Q psy10231 188 VGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPV 267 (607)
Q Consensus 188 ~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~ 267 (607)
..+. ..+++
T Consensus 74 --------~~~~---~~~~~------------------------------------------------------------ 82 (310)
T TIGR01272 74 --------AGDL---SMQVA------------------------------------------------------------ 82 (310)
T ss_pred --------Ccch---hhhhh------------------------------------------------------------
Confidence 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhhhHHH-HHHHH-hhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHH
Q psy10231 268 FVSLGVLIVYSLGYIVTWQYTSAACAVV-ALVGF-AAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQ 345 (607)
Q Consensus 268 ~~~~g~~~~~~~~~~~~Wr~~~~~~~i~-~~~~~-~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (607)
..-.....|+.++...... .++.+ +....+||... ++.++. + +
T Consensus 83 ---------~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~----------~----~------- 127 (310)
T TIGR01272 83 ---------TANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARV----------S----S------- 127 (310)
T ss_pred ---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----cccccc----------c----c-------
Confidence 0000112455555522222 22221 12233454310 000000 0 0
Q ss_pred HHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh---CCCcc-hHHHHHHHHHHHHHH
Q psy10231 346 SLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDA---GSSLD-DYVASIIVAGLRFFM 421 (607)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~ 421 (607)
+++ ...++.+++|+.+. ..+..+...........|.+.|+.+. |.+.+ .......+..+.++|
T Consensus 128 ------~~~--~~~~~~~~~~~~~l-----~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iG 194 (310)
T TIGR01272 128 ------GDT--TQKTSAFQFTHLVL-----GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVG 194 (310)
T ss_pred ------ccc--cchhhHHhhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00112333332222 22333333444667788889998753 55433 456677778888999
Q ss_pred HHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccC
Q psy10231 422 AIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFP 501 (607)
Q Consensus 422 ~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 501 (607)
+++++++.||+++|+.+..+..+.+++.++... ...........+. ..+.....|...+...+.+|
T Consensus 195 r~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-------------~~~~~~~~~~~l~-g~~~s~i~P~~~s~a~~~~~ 260 (310)
T TIGR01272 195 RFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-------------THGYVAMWFVLAL-GLFNSIMFPTIFSLALNALG 260 (310)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-------------cCCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhh
Confidence 999999999999998887776666655533322 1111222222222 33334456777777878777
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHH
Q psy10231 502 LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWA 542 (607)
Q Consensus 502 ~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~ 542 (607)
++ .+++.++. .++.+|+.+.|.+.|.+.|..|.+.++++
T Consensus 261 ~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 261 RH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred hh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 64 45666764 67889999999999999998887777663
No 113
>KOG2563|consensus
Probab=99.63 E-value=1.7e-14 Score=142.86 Aligned_cols=384 Identities=15% Similarity=0.090 Sum_probs=240.3
Q ss_pred cchhHHHhh--hcccccccc----ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhh
Q psy10231 26 DASWIGKLH--CNNLTHAIP----SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTA 99 (607)
Q Consensus 26 ~~~~~~~~~--~~~~~~~~~----~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~ 99 (607)
.++|+..+. +..+..++. ++....... .++ +....-|+.-+|++.+....+++-|+.|++|-|..++++.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~---~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNS---FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHH---Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 356765443 334444332 333334444 455 7777889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcc------chh--HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHh
Q psy10231 100 IPFIIGWTIITVSK------GFT--LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLG 170 (607)
Q Consensus 100 ~l~~~~~~~~a~a~------~~~--~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~ 170 (607)
.+..+|..+-..+. .++ ....+..+.+.+.-.... ...+..-|+++++|..+..+-.++..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999999888763 344 666778888888777777 667777899999999999999998889988888777
Q ss_pred hhh----------hHHH--HHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhh
Q psy10231 171 YIV----------TWQY--TSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMA 238 (607)
Q Consensus 171 ~~l----------~Wr~--~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (607)
..+ .|-. .|+....++.+.+++
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l---------------------------------------------- 230 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLAL---------------------------------------------- 230 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence 665 2333 122222222222111
Q ss_pred cchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCC
Q psy10231 239 IGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGC 318 (607)
Q Consensus 239 ~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~ 318 (607)
..+.....|.+|.-.
T Consensus 231 ------------------------------------------------------------~~~~~~~~P~tPps~----- 245 (480)
T KOG2563|consen 231 ------------------------------------------------------------VLFVFTKKPPTPPSA----- 245 (480)
T ss_pred ------------------------------------------------------------HHHhcCCCCCCCCch-----
Confidence 111112222222100
Q ss_pred hHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy10231 319 TKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFF 398 (607)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (607)
+... +++.+...+.++.++++++.. . .+.+......++.....+...+
T Consensus 246 ---s~~~------------------------~~~~~f~~si~~~~~n~~F~i----l-~~~ygi~~g~F~~l~~~l~~~l 293 (480)
T KOG2563|consen 246 ---SQAA------------------------LQDASFPKSIKSCFKNRQFII----L-AICYGIGLGLFNSLSTLLNLAL 293 (480)
T ss_pred ---hHhh------------------------hhcCcHHHHHHHHHcCccHHH----H-HHHHhhhHHHHHHHHHHhhhcc
Confidence 0000 001223456667787775432 1 1222222223444444444333
Q ss_pred HHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchh-HHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHH
Q psy10231 399 EDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRAL-ATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLAC 476 (607)
Q Consensus 399 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (607)
...|++. .++....+..+.+++++.+.|.+.||.+.-+. .+.......++...+.... ......+++..
T Consensus 294 ~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t---------~~~~~~viv~~ 364 (480)
T KOG2563|consen 294 CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT---------LFLGDSVIVFT 364 (480)
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh---------ccCCceEehhh
Confidence 3345543 46778888888999999999999999876443 3333333333322211111 11222233344
Q ss_pred HHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh----hHHHHHHHHHHHHHHHH
Q psy10231 477 ILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN----MGGMMWAFSCACLLAMV 552 (607)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g----~~~~~~~~~~~~~~~~~ 552 (607)
.+...+.++.+..|+.+-+..|..=+..-++..|+.+..+++.+.+-..+.+...+..+ +...-+.....+++..+
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 444 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAI 444 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHH
Confidence 44455566677788888888887544556888999999999999999999998888776 54455666666677777
Q ss_pred HhhhcccCCCCCC
Q psy10231 553 FIQAFLPETQGKT 565 (607)
Q Consensus 553 ~~~~~~~~~~~~~ 565 (607)
+..++.|+.++++
T Consensus 445 lva~~r~~y~R~~ 457 (480)
T KOG2563|consen 445 LVAFFRPDYRRLR 457 (480)
T ss_pred HHhhhhhhHHhHh
Confidence 7666655444433
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.61 E-value=6.8e-14 Score=142.63 Aligned_cols=340 Identities=16% Similarity=0.143 Sum_probs=215.9
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh----hhcCch-hhhhhhhHHHHHHHHHHhcc
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD----LLGRKT-TVQLTAIPFIIGWTIITVSK 113 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D----r~Grr~-~l~~~~~l~~~~~~~~a~a~ 113 (607)
..+.....+..... +.+|++....|.+..+.-+--++.-|+.|.+.| |+||+| -++.+.+..++.+.++-.++
T Consensus 27 ~~~~~~~yLl~fYT--dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p 104 (467)
T COG2211 27 AFGIVVLYLLFFYT--DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP 104 (467)
T ss_pred HHHHHHHHHHHHHh--cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC
Confidence 33333444444333 177999999999999999999999999999999 589865 55567788888888887776
Q ss_pred c------hhHHHHHHHHHhhhhhhHhh-hHhHHhhccC-CCccccccchhhHHHHHHHHHHHHHhhhh-----------h
Q psy10231 114 G------FTLLCVGRFITGMAIGMSSA-CYVYVAEICL-PNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----------T 174 (607)
Q Consensus 114 ~------~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----------~ 174 (607)
+ ....++.-++.+++...... --++..|+.+ +++|.+..+.-..+.++|.++...+...+ |
T Consensus 105 ~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g 184 (467)
T COG2211 105 DFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALG 184 (467)
T ss_pred CcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhh
Confidence 4 45666778888999888888 8889999987 78899999998888888876654444322 4
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcC
Q psy10231 175 WQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICL 254 (607)
Q Consensus 175 Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~ 254 (607)
|+..-.+.++++.+..+
T Consensus 185 ~~~~~~~~~vi~~i~~l--------------------------------------------------------------- 201 (467)
T COG2211 185 YQGTALVLGVIGVILLL--------------------------------------------------------------- 201 (467)
T ss_pred HHHHHHHHHHHHHHHHH---------------------------------------------------------------
Confidence 44444444444443333
Q ss_pred CCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCch
Q psy10231 255 PNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTA 334 (607)
Q Consensus 255 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~ 334 (607)
+.++.+.|.+. ++.+.++
T Consensus 202 ----------------------------------------------~~~~~v~ER~~---~~~~~~~------------- 219 (467)
T COG2211 202 ----------------------------------------------FCFFNVKERVV---ETQPTKT------------- 219 (467)
T ss_pred ----------------------------------------------HHHHHhhcccC---ccccCcc-------------
Confidence 23333444321 0000000
Q ss_pred hhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCc-chHHHHH
Q psy10231 335 VADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSL-DDYVASI 412 (607)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~ 412 (607)
. .+.+-.+++...++|++++..+...+ +.+.+.+........|.+. .|.+. .+.....
T Consensus 220 ---~------------~~~~~~~~~~~~~~Nrp~~~~l~~~l-----~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~ 279 (467)
T COG2211 220 ---G------------VKLKLKDSFLLIFKNRPLLLLLLMNL-----LLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLL 279 (467)
T ss_pred ---c------------ccccHHHHHHHHHccchHHHHHHHHH-----HHHHHHHHHhhhhheeEEEEcCChHHHHHHHHH
Confidence 0 00011122334666776554333111 1222233333333333331 23322 2344555
Q ss_pred HHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhh
Q psy10231 413 IVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLP 492 (607)
Q Consensus 413 ~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (607)
......+++.++..++.+|+|+|+++..+.++.+++.+++-+.. .+.....++..++...+. ....++.
T Consensus 280 ~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~----------~~~~~l~~~~~~i~~~g~-~~~~~l~ 348 (467)
T COG2211 280 ASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP----------AGSVVLIVVALIIAGVGT-GIANPLP 348 (467)
T ss_pred HHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc----------CcchHHHHHHHHHHHHHh-hcccccc
Confidence 55666667789999999999999999999888888887765521 122333333334433433 3446888
Q ss_pred hhhhccccC-------ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 493 WVMIAELFP-------LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 493 ~~~~~e~~p-------~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
|++++|... .+..|...|...++.-+|.+++..+.|+.++..|+
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 899888764 23448888999999999999999999998876553
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=2e-12 Score=127.74 Aligned_cols=364 Identities=14% Similarity=0.077 Sum_probs=211.3
Q ss_pred ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhh-hhhhhHHHHHHHHHHhccc---hhHHHHHHHHHhhhhhhHhh-h
Q psy10231 61 SDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTV-QLTAIPFIIGWTIITVSKG---FTLLCVGRFITGMAIGMSSA-C 135 (607)
Q Consensus 61 ~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l-~~~~~l~~~~~~~~a~a~~---~~~l~~~R~l~G~g~g~~~~-~ 135 (607)
+...+...++..+-.++-+++.|.++|+.|+||.. -+...+..++..+..++++ ++..++.-.+..++...... -
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 34568888889999999999999999999976655 4555666666777777765 44555567888888888888 9
Q ss_pred HhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhhhHHHHHHHhHHHHHHHHHHHhcCCCCh--hhHhhccccccch
Q psy10231 136 YVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETP--SWLARQGMAIGEF 213 (607)
Q Consensus 136 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l~Wr~~f~~~~~~~~~~~~~~~~~pes~--~~~~~~~~~~~~~ 213 (607)
.+++.+..++++-++..+.-.....+|..+.-++... .. ..-|++- +-+....+++++
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~-----------------~~--~~~~~~~~~~~l~~l~~~~~~- 196 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVL-----------------GF--ALGQQTGITIILLGLPPADGE- 196 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHH-----------------HH--hcccccceeEEeeccCccccc-
Confidence 9999999999999988877766666666553222110 00 0001110 000000000000
Q ss_pred hhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhH
Q psy10231 214 RYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACA 293 (607)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~ 293 (607)
.=|..+.++.
T Consensus 197 ----------------------------------------------------------------------~~ri~~~l~A 206 (438)
T COG2270 197 ----------------------------------------------------------------------DVRITGLLAA 206 (438)
T ss_pred ----------------------------------------------------------------------cchhHHHHHH
Confidence 0011111111
Q ss_pred -HHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHH
Q psy10231 294 -VVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPF 372 (607)
Q Consensus 294 -i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (607)
-..+..+..++.+++.++- ..+. + +......++..++ ++++.+.+..
T Consensus 207 ~W~li~~iPm~~~v~~~~~~---~~~~--~-----------~~l~~g~k~L~~t------------~k~i~~~~~i---- 254 (438)
T COG2270 207 LWWLLFALPMILNVHDAEKI---SSPP--P-----------TALRNGFKELKST------------FKEIRGRKNL---- 254 (438)
T ss_pred HHHHHHHhHHHhcccccccc---cccc--h-----------HHHHHHHHHHHHH------------HHHHhcccch----
Confidence 1111222234444443320 0000 0 0011122222222 2222333322
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 373 FILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
..+++..+...-+.+........+-. ..|.+.. .........+..++|+++.|++.||+|.|+++..+.++..+..+
T Consensus 255 -~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 255 -VLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred -HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 22223333334456777777777766 5577543 45677778899999999999999999999988888777666554
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
...+. ........+.++ .+.+..+.....=++..++.|++.-+..+|+.+..++..++.+|...+.+
T Consensus 334 ~~~~~------------~~~~~f~i~gll-~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~ 400 (438)
T COG2270 334 YLIFL------------EGELDFWILGLL-VGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVI 400 (438)
T ss_pred HHHHc------------cccHHHHHHHHH-HHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHH
Confidence 44331 111122222222 22222233455558999999999999999999999999999999999998
Q ss_pred HHhhhhHH-HHHHHHHHHHHHHHHhhhcccCC
Q psy10231 531 MYLLNMGG-MMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 531 ~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.+..|-.. .+..+.++..++. +.+...|+.
T Consensus 401 t~iTg~~r~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 401 TQITGSSRAGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred HHHhcchhhHHHHHHHHHHhhH-hhEEeecCC
Confidence 88766432 3333333333333 334444544
No 116
>KOG3626|consensus
Probab=99.56 E-value=3.8e-13 Score=142.91 Aligned_cols=304 Identities=17% Similarity=0.201 Sum_probs=201.2
Q ss_pred hccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc--
Q psy10231 35 CNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-- 112 (607)
Q Consensus 35 ~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-- 112 (607)
..++..++....+..+.+ .|++++.+.|++.+.+-++..+...+..+.+-|.-|-+.+-+|+++++++++++++-
T Consensus 108 ~q~l~~~y~~s~IttiEr---RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf 184 (735)
T KOG3626|consen 108 AQGLYVGYFNSVITTIER---RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHF 184 (735)
T ss_pred HHHhhhhhhhhhhhhhhh---hcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHH
Confidence 345555555666666666 999999999999999999999999999999999999999999999999999998753
Q ss_pred ------------------c---------------------------c----h-hHHHHHHHHHhhhhhhHhh-hHhHHhh
Q psy10231 113 ------------------K---------------------------G----F-TLLCVGRFITGMAIGMSSA-CYVYVAE 141 (607)
Q Consensus 113 ------------------~---------------------------~----~-~~l~~~R~l~G~g~g~~~~-~~~~i~e 141 (607)
+ . + ..++++.++.|+|....++ +.+|+-|
T Consensus 185 ~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD 264 (735)
T KOG3626|consen 185 FSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD 264 (735)
T ss_pred hcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc
Confidence 0 0 2 2667789999999999999 9999999
Q ss_pred ccCCCccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHHHHHHHH-HhcCCCChhhHhhccccccchhhhccc
Q psy10231 142 ICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVALVGFAA-MHAVPETPSWLARQGMAIGEFRYYLIP 219 (607)
Q Consensus 142 ~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~~~~~~~-~~~~pes~~~~~~~~~~~~~~~~~~~~ 219 (607)
...+++-+..+++......+|.++|.+++++. .+..-+. .. .-.-|.-|||
T Consensus 265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~----------~~~~~it~~DPrW----------------- 317 (735)
T KOG3626|consen 265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFG----------LSPIGITPTDPRW----------------- 317 (735)
T ss_pred cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccc----------cCCCCCCCCCcch-----------------
Confidence 99999999999999999999999999888765 1111000 00 0001222222
Q ss_pred cchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHH
Q psy10231 220 SKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVG 299 (607)
Q Consensus 220 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~ 299 (607)
.-.|..-|++++...++.
T Consensus 318 --------------------------------------------------------------IGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 318 --------------------------------------------------------------IGAWWLGFLICGALLLFS 335 (735)
T ss_pred --------------------------------------------------------------hhHHHHHHHHHHHHHHHH
Confidence 345888888888887777
Q ss_pred HhhhccccCChHHHHHhCChHHHHHHHHHHhcCch--hhh-hHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHH
Q psy10231 300 FAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTA--VAD-AELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILI 376 (607)
Q Consensus 300 ~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (607)
.+.++++|.... +..+..++++ .+..+.+++ +.+ ...+.+ ++-....+++++|| +++..
T Consensus 336 a~p~f~fPk~lp---~~~~~~~~~~-~~~~k~~~~~~~~~~~~~~~i---------kdfp~s~~~ll~N~-----if~~~ 397 (735)
T KOG3626|consen 336 AVPLFFFPKELP---KSQKRKRARD-LHVLKTESGGAKSDKTFGKKI---------KDFPKSIKRLLSNP-----IFMLV 397 (735)
T ss_pred HHHHHhCcccCc---cccccchhhh-hcccccccccccCCcchhhhH---------HHHHHHHHHHhcCc-----hHHHH
Confidence 777777776531 1110000000 000000000 000 000000 11234566778787 44445
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHH-HHHHHHHHHHHhHhhcccCC--chhHHHhhHHHHHH
Q psy10231 377 GFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIV-AGLRFFMAIIGSACIQMFSR--RALATTSAFFMALS 448 (607)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~-~~~~~~~~~~~g~l~d~~gr--r~~l~~~~~~~~~~ 448 (607)
.+........+..+.+|+|.|+++ .|.+.. +..+.... -.+..+|.+++|++..|+.- |.......+...++
T Consensus 398 ~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 398 VLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 555556666788999999999975 466443 44443333 33456788899999998753 44444433333333
No 117
>KOG2325|consensus
Probab=99.53 E-value=1.4e-13 Score=140.49 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=114.6
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcC-chhhhhhhhHHHHHHHHH-Hhc---c-chhH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGR-KTTVQLTAIPFIIGWTII-TVS---K-GFTL 117 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Gr-r~~l~~~~~l~~~~~~~~-a~a---~-~~~~ 117 (607)
....|.+++. |.+.+.+..||+.++..+|.++++++.|....|.+. |+.+++|.++..++.++- +++ + .-+.
T Consensus 55 ~s~wpYl~~l--D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~ 132 (488)
T KOG2325|consen 55 TSMWPYLQKL--DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYL 132 (488)
T ss_pred eecchhhhhc--CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 4566777775 677889999999999999999999999999999997 899999999999999988 433 3 5789
Q ss_pred HHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 118 LCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 118 l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
++++|++.|+|.|......+|+++....++|.++++....+..+|.++||.++..+
T Consensus 133 mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 133 MLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 99999999999999988999999999999999999999999999999999888765
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.51 E-value=1.8e-15 Score=160.79 Aligned_cols=400 Identities=12% Similarity=0.095 Sum_probs=3.0
Q ss_pred cccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc---
Q psy10231 37 NLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK--- 113 (607)
Q Consensus 37 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~--- 113 (607)
++..++....+..+.+ .|++++++.|++.+.+-++..+..++..++++|..|=|.+-.|.++++++++++++-+
T Consensus 16 ~~~~g~~~~~lttiEr---RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIER---RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 3444555667777777 9999999999999999999999999999999998888899999999999999876410
Q ss_pred -----------------------------------------------chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC
Q psy10231 114 -----------------------------------------------GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLP 145 (607)
Q Consensus 114 -----------------------------------------------~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~ 145 (607)
-++.++++.++.|+|.+..++ +.+|+-|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 046788899999999999999 99999999999
Q ss_pred CccccccchhhHHHHHHHHHHHHHhhhh-hHHHHHHHhHHHHHHHHHHHhcCCCChhhHhhccccccchhhhccccchhh
Q psy10231 146 NDRGYLSAFGPVFVSLGVLIVYSLGYIV-TWQYTSAACAVVALVGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINI 224 (607)
Q Consensus 146 ~~r~~~~~~~~~~~~lG~~ig~~l~~~l-~Wr~~f~~~~~~~~~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (607)
++-+..+|++.....+|.++|.++++.+ +...= +++.+....
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD-----------------~~~~~~~~~-------------------- 215 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVD-----------------FPKVPPDGV-------------------- 215 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeC-----------------CccccccCC--------------------
Confidence 9999999999999999999998888753 10000 000000000
Q ss_pred hhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhHHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhc
Q psy10231 225 LQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMH 304 (607)
Q Consensus 225 ~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~ 304 (607)
+..|.+. .+...|..-+++.++..++..+.++
T Consensus 216 --------------------------~i~p~dp----------------------~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 216 --------------------------GITPSDP----------------------RWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------CCCCCCc----------------------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 1233577777777777777766666
Q ss_pred cccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHHHHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhh
Q psy10231 305 AVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSLKVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEA 384 (607)
Q Consensus 305 ~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (607)
.+|+.-. .+.+.++.++. ++.+.++.+.++..++.+.+...+.-++-....+++++||.+ +...+......
T Consensus 248 ~FPk~lp---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f-----~~~~la~~~~~ 318 (539)
T PF03137_consen 248 FFPKKLP---GTSERQEEKES-SERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVF-----MCLILAGVFES 318 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCccCC---Ccccccchhhh-hhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHH-----HHHHHHHHHHH
Confidence 6665421 11000000000 000000000000000000000011122334566677777744 34444444555
Q ss_pred hhHHHHHHHHHHHHHH-hCCCc-chHHH-HHHHHHHHHHHHHHHhHhhcccC--CchhHHHhhHHHHHHHHHHhhhh---
Q psy10231 385 SGMYIVLYYAVNFFED-AGSSL-DDYVA-SIIVAGLRFFMAIIGSACIQMFS--RRALATTSAFFMALSMGISGTYE--- 456 (607)
Q Consensus 385 ~~~~~~~~~~~~~~~~-~g~~~-~~~~~-~~~~~~~~~~~~~~~g~l~d~~g--rr~~l~~~~~~~~~~~~~~~~~~--- 456 (607)
.....+..|.|.|++. .+.+. .+... ..+.-.+..+|.+++|++.+|++ .|+.+....+...++.+.+...+
T Consensus 319 ~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~ 398 (539)
T PF03137_consen 319 FIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLG 398 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 5678889999999985 35432 23333 23333466788999999999975 34444444444433333311110
Q ss_pred ---------hhhcc------c--c--------------------CCCC-CCChH-HHHHHHHHHHHHHhccchhhhhhhc
Q psy10231 457 ---------YYFSE------L--S--------------------MDDR-PLNWI-PLACILANVCASMLGMLQLPWVMIA 497 (607)
Q Consensus 457 ---------~~~~~------~--~--------------------~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (607)
..+++ . . -..+ ..... .++..++..........|.. ..+-
T Consensus 399 C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~-~i~L 477 (539)
T PF03137_consen 399 CPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST-LITL 477 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh-eeee
Confidence 00010 0 0 0000 01111 11222222222233333333 5566
Q ss_pred cccCccchhhHHHHHHHHHHH-HHHHHhhhcHHHHHhh
Q psy10231 498 ELFPLSVRGIMGGIVCSLGYL-FIFTTVKMYPDLMYLL 534 (607)
Q Consensus 498 e~~p~~~r~~~~g~~~~~~~~-~~~i~~~i~~~l~~~~ 534 (607)
..+|+++|+.|.|+...+.++ |.+-+|.++|.+.|..
T Consensus 478 R~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 478 RCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------
T ss_pred ccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 889999999999999988875 5677899999999864
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.51 E-value=7.1e-14 Score=149.76 Aligned_cols=145 Identities=17% Similarity=0.117 Sum_probs=105.5
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHH---HHhccchhHHHHHHHHHhhhhhhH
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTI---ITVSKGFTLLCVGRFITGMAIGMS 132 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~---~a~a~~~~~l~~~R~l~G~g~g~~ 132 (607)
++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...++++|++.|++.+..
T Consensus 280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 359 (490)
T PRK10642 280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCF 359 (490)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 67888888888888899999999999999999999999988877654443322 223456788889999999988877
Q ss_pred hh-hHhHHhhccCCCccccccch-hhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHHHhcCCCChh
Q psy10231 133 SA-CYVYVAEICLPNDRGYLSAF-GPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAAMHAVPETPS 201 (607)
Q Consensus 133 ~~-~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~~~pes~~ 201 (607)
.. ...++.|.+|++.|+..++. ++.+. ++..++|.+.+++ +|+..+++..+++++..+..+++||||+
T Consensus 360 ~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 360 TGVMASTLPAMFPTHIRYSALAAAFNISV-LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHHHHHHHHHHCCCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 77 88889999999999999886 45544 4445666665554 4666666555555555443333344433
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.45 E-value=3.5e-13 Score=117.87 Aligned_cols=133 Identities=23% Similarity=0.412 Sum_probs=118.6
Q ss_pred HHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC
Q psy10231 67 IASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLP 145 (607)
Q Consensus 67 i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~ 145 (607)
+.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..++++++.+.+.+++.|++.+...+ ...++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34566788899999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH-hcCCCC
Q psy10231 146 NDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM-HAVPET 199 (607)
Q Consensus 146 ~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~-~~~pes 199 (607)
++|++..++......+|..+++.+++.+ +|++.|++.++..++..+.. +..||+
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999998877 89999999888877766554 445553
No 121
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.37 E-value=9.5e-10 Score=109.43 Aligned_cols=319 Identities=12% Similarity=0.115 Sum_probs=195.9
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhc-----Cchhhhh-hhhHHHHHHHHHHhc-----c-------ch--
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLG-----RKTTVQL-TAIPFIIGWTIITVS-----K-------GF-- 115 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~G-----rr~~l~~-~~~l~~~~~~~~a~a-----~-------~~-- 115 (607)
|++++..-.+.+.+...+... ..+.+|+.+|+.+ ||..+++ |.++...+..+..++ . +.
T Consensus 9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 788888888888888887775 5899999999999 8887776 566666655555543 2 22
Q ss_pred --hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHH
Q psy10231 116 --TLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVAL 187 (607)
Q Consensus 116 --~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~ 187 (607)
....+.-.+.|+|.+...+ ..++++|..++++|+++.++...+.-+|.+++..+.+.+ .-|..-.+.....+
T Consensus 88 g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 2334457888999999999 999999999999999999999999999999998887766 12222222211111
Q ss_pred HHHHHHhcCCCChhhHhhccccccchhhhccccchhhhhHhHHHHHHHHhhcchhhhHHHHHHHhcCCCCcccccchhhH
Q psy10231 188 VGFAAMHAVPETPSWLARQGMAIGEFRYYLIPSKINILQYHIHTWFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPV 267 (607)
Q Consensus 188 ~~~~~~~~~pes~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~E~~~~~~r~~~~~~~~~ 267 (607)
...+
T Consensus 168 ~~~l---------------------------------------------------------------------------- 171 (403)
T PF03209_consen 168 ALLL---------------------------------------------------------------------------- 171 (403)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 1111
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHhhhccccCChHHHHHhCChHHHHHHHHHHhcCchhhhhHHHHHHHHH
Q psy10231 268 FVSLGVLIVYSLGYIVTWQYTSAACAVVALVGFAAMHAVPETPSWLARQGCTKEARNSLVWFRRSTAVADAELKEIQQSL 347 (607)
Q Consensus 268 ~~~~g~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (607)
.++..+. .|.++ .+.. +..
T Consensus 172 -------------------------------~~ia~wg-~E~r~-------~~~~--------~~~-------------- 190 (403)
T PF03209_consen 172 -------------------------------NLIALWG-QEPRR-------SRRA--------AAA-------------- 190 (403)
T ss_pred -------------------------------HHHHHHh-cccCC-------cccc--------cCC--------------
Confidence 0011111 12100 0000 000
Q ss_pred HHhhcCCccchhhhhhccCcchHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-H-----HhCCCcc-hHHHHHHHHHHHHH
Q psy10231 348 KVQMAGSSMDHCAQTFTNSAVWKPFFILIGFFLFQEASGMYIVLYYAVNFF-E-----DAGSSLD-DYVASIIVAGLRFF 420 (607)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~g~~~~-~~~~~~~~~~~~~~ 420 (607)
++++.+-.+.+.+...+|+.++ ++....+. .+.+++.+.+ + -.|++.. ........+.+.++
T Consensus 191 -~~~~~~f~~a~~~~~~~~~a~~-f~~fl~l~---------t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~ 259 (403)
T PF03209_consen 191 -ERPRPPFREAWRQVWASPQARR-FFVFLFLG---------TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLL 259 (403)
T ss_pred -CCCCccHHHHHHHHHhCCChhH-HHHHHHHH---------HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0001111234455566666554 32222222 2222232222 2 1255433 34567777788888
Q ss_pred HHHHHhHhhc-ccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccc
Q psy10231 421 MAIIGSACIQ-MFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAEL 499 (607)
Q Consensus 421 ~~~~~g~l~d-~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 499 (607)
+....+++.. |.++++....+.....++...+...... .+.+.......+++.+.+...... ...+.++
T Consensus 260 G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~---------~~~~~~~~~~~l~G~g~G~f~vga-ls~mM~l 329 (403)
T PF03209_consen 260 GMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL---------GSPWLFRPGVFLLGLGNGLFTVGA-LSLMMDL 329 (403)
T ss_pred HHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc---------ccchHHHHHHHHHHHhhhHHHHHH-HHHHHhC
Confidence 8888888765 6777777777777777666655443221 334444444444444443332222 2556677
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 500 FPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 500 ~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
.+++..|..+|.-...+.+...++..+.|.+.|.
T Consensus 330 t~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 330 TSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999888888888888774
No 122
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=1.1e-11 Score=129.11 Aligned_cols=179 Identities=13% Similarity=0.021 Sum_probs=127.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+....+..+...........+.|.+.++.|.+.. .+.......++.+++.++.|++.||+|||+.+..+..+..++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 97 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTL 97 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 33333333333334445566677877777777543 45666777788899999999999999999999988887777766
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
+.... ...+....... ..........+...+++.|.+|++.|+.+.++......+|..+++.+.+.+
T Consensus 98 ~~~~~------------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 98 LCALA------------TNVTQLLILRF-LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHc------------cchHHHHHHHH-HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 65541 12222222222 222222334566678999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 531 MYLLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 531 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.+..+|+..+++.+.+.++..++...++||+.+
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 998999888888776666666666666777643
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.32 E-value=1e-11 Score=136.45 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=121.2
Q ss_pred hHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhcc
Q psy10231 65 SWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEIC 143 (607)
Q Consensus 65 ~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~ 143 (607)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.++..+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445677789999999999999999999999999999999999999999988999999999999998999 999999999
Q ss_pred CCCccccccchhhHHHHHHHHHHHHHhhhh---hHHHHHHHhHHHHHHHHHHHhcCCCCh
Q psy10231 144 LPNDRGYLSAFGPVFVSLGVLIVYSLGYIV---TWQYTSAACAVVALVGFAAMHAVPETP 200 (607)
Q Consensus 144 ~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l---~Wr~~f~~~~~~~~~~~~~~~~~pes~ 200 (607)
|.++|++++++......+|.+++|.+++.+ +....|++.++..++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999998866 456677777777777777677789885
No 124
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.30 E-value=1.7e-10 Score=120.86 Aligned_cols=179 Identities=9% Similarity=0.009 Sum_probs=129.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+....+.++.+...........|.+.++.+.+.. .+.......++..++.+..|++.||+|||+.+..+.++..++.+
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 88 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAST 88 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 44444444444444455556666766667777554 46677778888899999999999999999999988888888777
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
..++. .+.+..+. .-.+.+.......+....++.|.+|++.|+.+.|+.+....+|..+++.+.+.+
T Consensus 89 ~~~~~------------~~~~~l~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 89 ATMFA------------TGPESLYL-LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHh------------cCHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76652 12222222 222333333334466667889999999999999999999999999999998887
Q ss_pred HH------hhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 531 MY------LLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 531 ~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.+ ..||+..|.+.+...++..++.++++||+++
T Consensus 156 ~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 156 LALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 64 3589999999888887777777777788764
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=4.3e-11 Score=124.37 Aligned_cols=163 Identities=13% Similarity=-0.031 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.......|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+.++..++....++.
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------- 79 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA----------- 79 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----------
Confidence 4455556666667777543 5677788889999999999999999999999998888877777666552
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCA 546 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~ 546 (607)
...+.......+.+.+ .....+....++.|.+|++.|+.+.++......+|..+++.+.+.+.+..+|+..+++.+.+
T Consensus 80 -~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 157 (399)
T TIGR00893 80 -GAYVSLYILRVLLGAA-EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVL 157 (399)
T ss_pred -cCHHHHHHHHHHHHHH-HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 1222333333333333 33345666689999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhhcccCCCC
Q psy10231 547 CLLAMVFIQAFLPETQG 563 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~~ 563 (607)
.++..++..+..||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHhhheecCCCC
Confidence 77777766666666544
No 126
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.28 E-value=1e-10 Score=123.49 Aligned_cols=174 Identities=7% Similarity=-0.134 Sum_probs=126.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHh
Q psy10231 375 LIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISG 453 (607)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~ 453 (607)
..++..+...........+.|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+.++..++.++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 106 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFG 106 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHH
Confidence 33344444333344567778888888888654 46677788888999999999999999999999988888888777665
Q ss_pred hhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 454 TYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
.. ...+.......+.+.+.+. ..+....++.|.+|+++|+.++|+.+....+|..+++.+.+.+.+.
T Consensus 107 ~~------------~~~~~l~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 107 FS------------SSLWAFALLWVLNAFFQGW-GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HH------------hHHHHHHHHHHHHHHHHHc-cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 52 1122222222222222332 2355568889999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 534 LNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 534 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.||+..|++.++++++..++..+.+||+
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999888877666655555555654
No 127
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=4.3e-10 Score=112.67 Aligned_cols=173 Identities=17% Similarity=0.058 Sum_probs=145.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHH
Q psy10231 374 ILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGIS 452 (607)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~ 452 (607)
..+.+..|......+...-.+|.+-++.+.+.. ++.....++++..++.++...+.||+.||++++....++.++.++.
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 344444455555567777888899888888654 6888899999999999999999999999999999999999999888
Q ss_pred hhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH
Q psy10231 453 GTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY 532 (607)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~ 532 (607)
++ .+++..+...=+........+.++..++..++.|+++|+++.++..+-..+...++.++..++-+
T Consensus 96 al-------------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 96 AL-------------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HH-------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 87 44555555544444445555567777999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 533 LLNMGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 533 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
..||+..|+..+.++++..+..+..+|
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999
No 128
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=1.7e-10 Score=119.67 Aligned_cols=168 Identities=13% Similarity=0.005 Sum_probs=124.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccc
Q psy10231 384 ASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSEL 462 (607)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 462 (607)
..+........|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+..+..++.+.....
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~------- 90 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS------- 90 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------
Confidence 33444555556777777777543 5667778888899999999999999999999998888887777666541
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHH
Q psy10231 463 SMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWA 542 (607)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~ 542 (607)
+..+.......+.+.+ .....+....++.|.+|++.|+++.++.+....++..+++.+.+.+.+..+|+..+++
T Consensus 91 -----~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 91 -----NNIETLLVLRFVQAFG-ASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred -----ccHHHHHHHHHHHHcc-hhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 1222222222222222 2223455568889999999999999999999999999999999999998999999988
Q ss_pred HHHHHHHHHHHhhhcccCCCCC
Q psy10231 543 FSCACLLAMVFIQAFLPETQGK 564 (607)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~ 564 (607)
.+.+.++..++..+..||++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC
Confidence 8888777777766666776543
No 129
>PRK03545 putative arabinose transporter; Provisional
Probab=99.26 E-value=3.5e-10 Score=117.70 Aligned_cols=160 Identities=10% Similarity=-0.007 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 390 VLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
.....|.+.++.|.+.. .+.......+...++.+..|.+.||+|||+.+..+..+..++.+..++. +
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------~ 95 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA------------W 95 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh------------c
Confidence 33446777777777554 4566667777788888999999999999999999988888887766552 2
Q ss_pred CChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHH
Q psy10231 469 LNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACL 548 (607)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~ 548 (607)
+.+..++.-.+ .+.......+....++.|.+|++.|+.+.|+......++..++|.+.+.+.+..||+..|++.+.+++
T Consensus 96 ~~~~l~~~r~~-~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 174 (390)
T PRK03545 96 NFTVLLISRIG-IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGAL 174 (390)
T ss_pred cHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHH
Confidence 22222322222 22222233455567889999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHhhhcccCCC
Q psy10231 549 LAMVFIQAFLPETQ 562 (607)
Q Consensus 549 ~~~~~~~~~~~~~~ 562 (607)
+..+......|+.+
T Consensus 175 l~~~~~~~~~~~~~ 188 (390)
T PRK03545 175 ITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHhCCCCC
Confidence 77666666566643
No 130
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.25 E-value=4.3e-10 Score=116.98 Aligned_cols=181 Identities=14% Similarity=0.051 Sum_probs=126.9
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHH
Q psy10231 368 VWKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMA 446 (607)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~ 446 (607)
.|+.++......+.... ..+......|.+.++.|.+.. .+.......+...++.++.|.+.||+|||+.+..+..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 18 NWSAVFSVAFCVACLII-VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 35444444333332222 223334456777777777544 4666677788888999999999999999999999999888
Q ss_pred HHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhh
Q psy10231 447 LSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKM 526 (607)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i 526 (607)
++.++.... .+.+..+..-.+.+.+.+. ..+....++.|.+|++.|+.+.++.....+++..++|.+
T Consensus 97 ~~~~~~~~~------------~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l 163 (394)
T PRK10213 97 LSCLLVSFA------------NSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL 163 (394)
T ss_pred HHHHHHHHH------------ChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877666541 1222333333333333322 346666888999999999999999999999999999999
Q ss_pred cHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 527 YPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 527 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
.+.+.+..||+..|++.+.++++..+......||++
T Consensus 164 ~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 164 GSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999998887776665555444556643
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.24 E-value=3e-11 Score=126.59 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=122.5
Q ss_pred ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc----chhHHHHHHHHHhhhhhhHhh-h
Q psy10231 61 SDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK----GFTLLCVGRFITGMAIGMSSA-C 135 (607)
Q Consensus 61 ~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~----~~~~l~~~R~l~G~g~g~~~~-~ 135 (607)
..+.+.+.+...++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+ .
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999988877776642 246677889999999999999 8
Q ss_pred HhHHhhccCCCccccccchhh-HHHHHHHHHHHHHhhhh----------hHHHHHHHhHHHHHHHHHHH-hcCCCChhhH
Q psy10231 136 YVYVAEICLPNDRGYLSAFGP-VFVSLGVLIVYSLGYIV----------TWQYTSAACAVVALVGFAAM-HAVPETPSWL 203 (607)
Q Consensus 136 ~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l----------~Wr~~f~~~~~~~~~~~~~~-~~~pes~~~~ 203 (607)
..++.|.+|+++|++..++.+ ...++|..+||.+++.+ ||+..|++.+++.++..++. +++||+.+..
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 999999999999999999997 67889999999999876 28999999888877766554 6678885443
No 132
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.23 E-value=3.7e-10 Score=117.64 Aligned_cols=178 Identities=9% Similarity=0.039 Sum_probs=128.8
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHH
Q psy10231 373 FILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGI 451 (607)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~ 451 (607)
+.......+....+........|.+.++.|.+.. .........++..++.++.|+++||+|||+.+..+.....++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3344444445555566667788888888777554 455667777888889999999999999999999888877777766
Q ss_pred HhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHH
Q psy10231 452 SGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLM 531 (607)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~ 531 (607)
.... ...+..+....+.+.+ .....+....++.|.+|++.|+++.++.+....++..++|.+.+.+.
T Consensus 85 ~~~~------------~~~~~~~~~~~l~g~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 85 CSLA------------ETSSLFLAGRFLQGIG-AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HHHh------------CcHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5541 1112222222222222 22223455678899999999999999999999999999999988888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 532 YLLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 532 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
+..+|+..+++.+.++++..++..+..||+++
T Consensus 152 ~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 152 LKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred hCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 88899988988888887777776666777653
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.22 E-value=8.1e-10 Score=115.70 Aligned_cols=171 Identities=13% Similarity=0.039 Sum_probs=123.1
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHhCCCcch------HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 377 GFFLFQEASGMYIVLYYAVNFFEDAGSSLDD------YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+..+....+......+.|.+.++.|.+... +....+..+...++.++.|+++||+|||+.+..+....+++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 3333444445566677888888887765332 4456667778889999999999999999999988877777766
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
++... .+.+..+....+.+.. .+..+....+..|.+|++.|+.+.++.+....++..+++.+.+.+
T Consensus 100 ~~~~~------------~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 100 LMGLA------------QNIWQFLILRALLGLL--GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHH------------hhHHHHHHHHHHHHHh--hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55431 1222222222222222 233455556778899999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 531 MYLLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 531 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.+..+|+..+++.+.+.++..+...++.||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 166 ADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9989999899888888777776666666664
No 134
>PRK10054 putative transporter; Provisional
Probab=99.22 E-value=3.9e-10 Score=117.41 Aligned_cols=167 Identities=10% Similarity=0.018 Sum_probs=119.2
Q ss_pred hhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhh
Q psy10231 382 QEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYF 459 (607)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~ 459 (607)
....+.+....+.+.++++ .|.+.. .+.......+...++.++.|+++||+|||+.+..+.....++.+.+++.
T Consensus 18 ~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~---- 93 (395)
T PRK10054 18 LLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV---- 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH----
Confidence 3444566677777877754 577543 5666777778888999999999999999999988887777776655541
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHH
Q psy10231 460 SELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGM 539 (607)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~ 539 (607)
+..+..+.......... ....+....+..|.+|++.|+++.|+.+...++|..++|.+.+.+.+ .+|+..
T Consensus 94 --------~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~ 163 (395)
T PRK10054 94 --------NNVTLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLP 163 (395)
T ss_pred --------hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcH
Confidence 11222222222222222 23345566788899999999999999999999999999999998775 688888
Q ss_pred HHHHHHHHHHHHHHhhhcccCCC
Q psy10231 540 MWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
|+..+.+.++..++..+.+|+++
T Consensus 164 f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 164 FWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 88887777776665555555543
No 135
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.22 E-value=1.4e-10 Score=121.38 Aligned_cols=144 Identities=17% Similarity=0.205 Sum_probs=110.5
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh---c-Cch-hhhhhhhHHHHHHHHHHhc----cc
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL---G-RKT-TVQLTAIPFIIGWTIITVS----KG 114 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~---G-rr~-~l~~~~~l~~~~~~~~a~a----~~ 114 (607)
....|.+++ ++++++.+.....+...+...+ -++.|.++|-+ | ||| -++++.++..++.+..+.. .+
T Consensus 10 ~~~~~~l~~---~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 10 LAIYPFLKD---DLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHH---HcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccch
Confidence 355677888 9999999999999999998876 68999999976 3 444 4455776665555555553 34
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccC--CCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICL--PNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVAL 187 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~--~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~ 187 (607)
.....+.-++..+|.+.... +-+.+.|... ++.||...+.......+|.+++..+++.+ ++|..|.+.+++.+
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPL 165 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHH
Confidence 66777778889999999999 9999999985 34467777888888888999988888777 78888877776665
Q ss_pred HHHH
Q psy10231 188 VGFA 191 (607)
Q Consensus 188 ~~~~ 191 (607)
+..+
T Consensus 166 l~~~ 169 (433)
T PF03092_consen 166 LMLI 169 (433)
T ss_pred HHHH
Confidence 5544
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.22 E-value=3.9e-10 Score=118.09 Aligned_cols=168 Identities=13% Similarity=-0.066 Sum_probs=121.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhc
Q psy10231 382 QEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFS 460 (607)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 460 (607)
.............|.+.++.+.+.. .+.......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----- 100 (406)
T PRK11551 26 LEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA----- 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh-----
Confidence 3333345556667777777777543 5667777888899999999999999999999998887777766555441
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHH
Q psy10231 461 ELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMM 540 (607)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~ 540 (607)
.+.+..+....+.+.+. ....+....++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..+|+..+
T Consensus 101 -------~~~~~~~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 172 (406)
T PRK11551 101 -------WDFPSLLVARLLTGVGL-GGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIF 172 (406)
T ss_pred -------ccHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 12222233333222222 2234556688999999999999999999999999999999888888888898888
Q ss_pred HHHHHHHHHHHHHhhhcccCCC
Q psy10231 541 WAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
++.+.+.++..++...++||+.
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 173 YVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCCh
Confidence 8877766666665566667754
No 137
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.21 E-value=8.2e-11 Score=122.51 Aligned_cols=142 Identities=14% Similarity=0.169 Sum_probs=121.2
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+.......+++.+.+++.|++.+++.|...+
T Consensus 246 ~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~ 325 (393)
T PRK15011 246 ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGI 325 (393)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999998888888888999999999999999988877766666555556678888888999999999888888
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCCC
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVPE 198 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~pe 198 (607)
...+..|..|+ +|+++.++.+....+|..+++.+++.+ +|+..|++.+++.++..+..+++||
T Consensus 326 ~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 326 GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88888999875 589999999888899999999888877 8999999988888887776666665
No 138
>KOG2816|consensus
Probab=99.21 E-value=9e-11 Score=121.93 Aligned_cols=125 Identities=18% Similarity=0.201 Sum_probs=97.5
Q ss_pred HHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhh--hhHhh-hHhHHhhccCCC
Q psy10231 70 LGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAI--GMSSA-CYVYVAEICLPN 146 (607)
Q Consensus 70 ~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~--g~~~~-~~~~i~e~~~~~ 146 (607)
...+...+.++..|.++||+|||..+....+...+..+...+.. |++++ +.|+.. +.... ..++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 34677788899999999999999999999998888887777766 33333 444443 34444 899999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH-hcCCCC
Q psy10231 147 DRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM-HAVPET 199 (607)
Q Consensus 147 ~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~-~~~pes 199 (607)
+|....++....+..+..++|.+++.+ |.-..|++..+..++..+.. +++||+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999887 66667777777766665532 445555
No 139
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.20 E-value=1.9e-10 Score=120.96 Aligned_cols=144 Identities=10% Similarity=0.070 Sum_probs=123.9
Q ss_pred cccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-h
Q psy10231 57 ISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-C 135 (607)
Q Consensus 57 ~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~ 135 (607)
.+.+..+.|++.+...++..++.++.|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+ .
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667889999999999999999999999999999999999999999989999999999999999999999998888 8
Q ss_pred HhHHhhccCCCccccccch-hhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH-hcCCCCh
Q psy10231 136 YVYVAEICLPNDRGYLSAF-GPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM-HAVPETP 200 (607)
Q Consensus 136 ~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~-~~~pes~ 200 (607)
..++.|.+|++.|+...+. ++....+|.++++.+.+.+ |||..|.+.+++.++..+.. +..++.+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8999999999999887765 6777889999999888877 89999999888877655544 4444443
No 140
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.20 E-value=2.1e-10 Score=123.15 Aligned_cols=176 Identities=14% Similarity=0.010 Sum_probs=132.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHh
Q psy10231 375 LIGFFLFQEASGMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISG 453 (607)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~ 453 (607)
.+.+..+.............|.+.++.|.+. +..+......++..++.++.|++.||+|||+.+..+..+..++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh
Confidence 3334444444455667777888888888754 356777888899999999999999999999999999888888777665
Q ss_pred hhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 454 TYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
. ......+.....+.+.......+....++.|.+|++.|+.+.++......++..+++.+.+.+.++
T Consensus 86 ~-------------~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 86 V-------------APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred C-------------cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 4 122222333333333333344566778899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 534 LNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 534 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.+|++.|++.+.+.++..++..+..||+++
T Consensus 153 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 153 YHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred cCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999988887777777666666676543
No 141
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.4e-10 Score=114.65 Aligned_cols=182 Identities=10% Similarity=-0.074 Sum_probs=139.9
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHH
Q psy10231 369 WKPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMAL 447 (607)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~ 447 (607)
+.++++...+........=..+..-.|.+.++.+++.. .+.....+.+...++..+.|.++||.+.|..+..++++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 44455555444443222233445556777777667654 57788888999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc
Q psy10231 448 SMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY 527 (607)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~ 527 (607)
..+++++. +..+...++..+-+.+-+.++ |.+...++.-+|+++||+..++-++..++|+.+.+++.
T Consensus 107 ~nil~Gfs------------~s~~~~~~l~~lng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 107 VNILFGFS------------PSLFLFAVLWVLNGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHhhh------------hHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 99999882 222333444444455555565 55558888999999999999999999999999999999
Q ss_pred --HHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 528 --PDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 528 --~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
+.+.++.+|+..|++-++++++.+++.++.++++.+
T Consensus 174 ~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 174 LLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 888888899999999999999999888888766543
No 142
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.18 E-value=1.2e-09 Score=114.13 Aligned_cols=177 Identities=14% Similarity=0.107 Sum_probs=123.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+..+.+..+.............|.+.++.|.+.. .+.......+...++.++.|.+.||+|||+.+..+..+.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 92 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTL 92 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34444455555555566667777777777777543 56677788889999999999999999999999988887777776
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
..++. ...+..+....+.+. ......+....++.|.+|++.|+.+.++.+....+|..+++.+.+.+
T Consensus 93 ~~~~~------------~~~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 93 ACGFA------------PGYITMFIARLVIGI-GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHh------------ccHHHHHHHHHHHHh-hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66541 122222222222222 22333455668889999999999999999999999999999999988
Q ss_pred HHhhh--hHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 531 MYLLN--MGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 531 ~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
.+..+ |+..+.+.+...++. ++.....||++
T Consensus 160 ~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 160 VPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 87766 887776654444433 33344556654
No 143
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.18 E-value=7.9e-10 Score=118.66 Aligned_cols=178 Identities=12% Similarity=-0.008 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+...++..+........+..-.|.+.++.|.+. +..+....+.++...+.+..|+++||+|||+.+..+..+..++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3444445555555556667777899888887754 356677777888888899999999999999999999998888887
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhcccc-CccchhhHHHHHHHHHHHHHHHHhhhcHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELF-PLSVRGIMGGIVCSLGYLFIFTTVKMYPD 529 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~~~~~i~~~i~~~ 529 (607)
..+.. ++.+..+..-.+.+. ......+.....+.+.+ |++.|+.+.|+......+|..++|.+.+.
T Consensus 87 ~~~~a------------~~~~~li~~r~l~G~-g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 87 AAAFS------------PTASWLIATRALLAI-GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHc------------CCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77652 222233332222232 22233444445555554 77899999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 530 LMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 530 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
+.++.+|++.|++...++++..++..+++|+.+
T Consensus 154 l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 154 LLEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999988888777777777777654
No 144
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=1e-09 Score=113.87 Aligned_cols=164 Identities=7% Similarity=-0.064 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCC
Q psy10231 387 MYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMD 465 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (607)
........|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+..+.+++.++.++.
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~---------- 88 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS---------- 88 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh----------
Confidence 34555667777777777544 5677788889999999999999999999999999988888887766552
Q ss_pred CCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHH
Q psy10231 466 DRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSC 545 (607)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~ 545 (607)
++.+..+..-.+.+.+.+ ...+....++.|.+|++.|+.++++......++..+++.+.+.+.+..+|+..|++.+.
T Consensus 89 --~~~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 89 --SSYLMLAIGRLVSGFPHG-AFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred --CcHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 122223332222222222 22344456788999999999999999999999999999999998888899999999888
Q ss_pred HHHHHHHHhhhcccCCCC
Q psy10231 546 ACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~ 563 (607)
+.++..+...+..||.++
T Consensus 166 ~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 166 FNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 777776666666777543
No 145
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.18 E-value=7.4e-11 Score=121.84 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=119.6
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccch--hHHHHHHHHHhhhhhhHh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGF--TLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~--~~l~~~R~l~G~g~g~~~ 133 (607)
+++.++.+.+++.+.+.++..+++++.|++.||+|||+.+..+.++..++.++..+.++. ..+++..++.|++.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 313 (377)
T TIGR00890 234 SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTI 313 (377)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccch
Confidence 678888899999999999999999999999999999999999999999888888777653 335567888999998888
Q ss_pred h-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHH
Q psy10231 134 A-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 134 ~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~ 190 (607)
+ ...++.|.+|+++|++..++......+|..++|.+.+.+ ||++.|++.+++.++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 314 SLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 8 889999999999999999999999999999999988876 89999999888776653
No 146
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.17 E-value=2.5e-09 Score=114.11 Aligned_cols=168 Identities=9% Similarity=-0.038 Sum_probs=112.5
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhh
Q psy10231 378 FFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYE 456 (607)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~ 456 (607)
..++..+...+....+.|.+.++.|.+.+ .+.......++..++.++.|+++||+|||+.+..+.+...++.++.++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~- 121 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV- 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-
Confidence 33344444455566667777777787554 3455666677788899999999999999999888877777776655541
Q ss_pred hhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH----
Q psy10231 457 YYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY---- 532 (607)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~---- 532 (607)
.+.+..+..-++.+.+. ... .....++.|.+|++.|+.++|+.+...++|..+++.+.+.+..
T Consensus 122 -----------~s~~~l~~~r~l~G~~~-~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 122 -----------SSATGFIAVRFFIGFSL-ATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred -----------cCHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11222222222222222 222 2233567899999999999999998888888887776655432
Q ss_pred -----hhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 533 -----LLNMGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 533 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
..||+..|++.+++.++..++.+++.+
T Consensus 189 ~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 189 AGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 147999999988888777666555433
No 147
>PRK10504 putative transporter; Provisional
Probab=99.17 E-value=1.5e-09 Score=116.00 Aligned_cols=171 Identities=10% Similarity=-0.060 Sum_probs=125.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhh
Q psy10231 378 FFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYE 456 (607)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~ 456 (607)
+..+......+.+..+.|.+.++.|.+.. .+.......++..++.++.|+++||+|||+.+..+..+..++.+..+..
T Consensus 17 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~- 95 (471)
T PRK10504 17 FGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS- 95 (471)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-
Confidence 33444444556777888999988887654 3456666677788899999999999999999988877777666554431
Q ss_pred hhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 457 YYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
.+.+..+....+.+. ......+....++.|.+|++.|+++.|+.+....++..++|.+.+.+.+..+|
T Consensus 96 -----------~~~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 96 -----------GTLNELLLARVLQGV-GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred -----------CCHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 122222222222222 22233456668889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 537 GGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
++.|++....+.+..+......|+.
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999888777777776666665654
No 148
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.17 E-value=1.7e-09 Score=113.28 Aligned_cols=156 Identities=13% Similarity=0.062 Sum_probs=114.0
Q ss_pred HHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHH
Q psy10231 395 VNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIP 473 (607)
Q Consensus 395 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (607)
|.+.++.+.+.. ......++.++..++.++.|.++||+|||+.+..+..+..++.+..... .+.+..
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------~~~~~l 107 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT------------TSMTQF 107 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc------------CCHHHH
Confidence 344455566443 4556677778888999999999999999999998888777777666541 122222
Q ss_pred HHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 474 LACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
+..-.+.+.+.+ ...+..+.+..|.+|++.|++++++.+....++..++|.+.+.+.+..||+..|++.++..++..+.
T Consensus 108 ~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 108 LIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 222222222222 2234455778899999999999999999999999999999998888889999999988888877766
Q ss_pred hhhcccCCCC
Q psy10231 554 IQAFLPETQG 563 (607)
Q Consensus 554 ~~~~~~~~~~ 563 (607)
.++.+||+++
T Consensus 187 ~~~~lp~~~~ 196 (413)
T PRK15403 187 LLLAMPETVK 196 (413)
T ss_pred HHHhCCCCcc
Confidence 6666788654
No 149
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.16 E-value=1.4e-10 Score=121.21 Aligned_cols=138 Identities=20% Similarity=0.217 Sum_probs=120.3
Q ss_pred cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHh
Q psy10231 62 DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVA 140 (607)
Q Consensus 62 ~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~ 140 (607)
.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++.++.+|.+.+++.+++.|++.+...+ ....+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 328 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAV 328 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3456777888899999999999999999999999999998888888888889998899999999999999998 888889
Q ss_pred hccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCCCC
Q psy10231 141 EICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVPET 199 (607)
Q Consensus 141 e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~pes 199 (607)
|..|+++|+++.++++....+|..+++.+.+.+ ||++.|++.+...++..+...++++.
T Consensus 329 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 329 KRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998888777766 89999999888887776665555443
No 150
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.15 E-value=9.6e-11 Score=119.61 Aligned_cols=149 Identities=21% Similarity=0.327 Sum_probs=134.6
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCch-hhhhhhhHHHHHHHHHHhccchhHHHHHH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKT-TVQLTAIPFIIGWTIITVSKGFTLLCVGR 122 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~-~l~~~~~l~~~~~~~~a~a~~~~~l~~~R 122 (607)
....|.+.+ +.+|.++.+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.++..+.++.+.+.+..
T Consensus 195 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 195 LTYLPLYLQ--EVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 344455544 134889999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHh
Q psy10231 123 FITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMH 194 (607)
Q Consensus 123 ~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~ 194 (607)
++.|++.+...+ ..+++.|..|+++|++..++......+|..+++.+.+.+ +|++.+++.+++.++..+..+
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999 999999999999999999999999999999999999877 899999999998888766543
No 151
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.15 E-value=5.4e-10 Score=114.29 Aligned_cols=164 Identities=16% Similarity=0.058 Sum_probs=119.9
Q ss_pred HHHHHHHHH-HHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccC
Q psy10231 387 MYIVLYYAV-NFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSM 464 (607)
Q Consensus 387 ~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (607)
........| .+.++.|.+. +.+.......+...++.++.|+++||+|||+.+..+.++.+++.++..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------- 82 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------- 82 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---------
Confidence 444555666 4445566544 45677788888999999999999999999999999988888884444321
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHH
Q psy10231 465 DDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFS 544 (607)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~ 544 (607)
.+.+..+.... ..........+....++.|.+|+++|+.+.++.+....+|..+++.+.+.+.+..+|+..+++.+
T Consensus 83 ---~~~~~~~~~~~-l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~ 158 (352)
T PF07690_consen 83 ---SNFWLLLIARF-LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISA 158 (352)
T ss_dssp ---CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHH
T ss_pred ---hhHHHHhhhcc-ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccccc
Confidence 12232333333 33333334456677899999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHhhhcccCCCC
Q psy10231 545 CACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~ 563 (607)
.+.++..++...+.++++.
T Consensus 159 ~~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHHHHCCC---ST
T ss_pred chhhhhhhhHhhhhhhccc
Confidence 9988887765455554433
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.13 E-value=1.9e-10 Score=118.92 Aligned_cols=164 Identities=9% Similarity=-0.126 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCC
Q psy10231 387 MYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMD 465 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (607)
...+....|.+.++.|.+.. .+.......++..++.++.|+++||+|||+.+..+..+..++.++..+.
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS---------- 80 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh----------
Confidence 34555666777677777544 5677788888999999999999999999999999988888877776652
Q ss_pred CCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHh-hhcHHHHHhhhhHHHHHHHH
Q psy10231 466 DRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTV-KMYPDLMYLLNMGGMMWAFS 544 (607)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~-~i~~~l~~~~g~~~~~~~~~ 544 (607)
...+..++... ....+.....+....++.|.+|++.|+.+.++.+....+|..+++ .+.+.+.+..+|+..+++.+
T Consensus 81 --~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 81 --TSLWVMAALWA-LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPG 157 (379)
T ss_pred --hhHHHHHHHHH-HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHH
Confidence 12222222222 222333334566678999999999999999999999999999999 46666667778888888888
Q ss_pred HHHHHHHHHhhhcccCCCC
Q psy10231 545 CACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~ 563 (607)
.+.++..++.+++.||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHHHHheeeCCCcc
Confidence 7777776666666666543
No 153
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=2.2e-09 Score=112.37 Aligned_cols=163 Identities=13% Similarity=0.037 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
..+....|.+.++.+.+.. .........++..++.++.|.++||+|||+.+..+.....++.+.....
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------- 98 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA----------- 98 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 3444445666667776543 4556677788889999999999999999999988887777776665441
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCA 546 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~ 546 (607)
...+..+....+.+... ....+.......|.+|++.|..+.++......++..++|.+.+.+.+..+|+..+++.+++
T Consensus 99 -~~~~~l~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~ 176 (406)
T PRK15402 99 -QSIEQFTLLRFLQGIGL-CFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAAL 176 (406)
T ss_pred -ccHHHHHHHHHHHHhHh-hhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 11222222222222222 2223555677889999999999999998888899999999999998888999999888888
Q ss_pred HHHHHHHhhhcccCCCC
Q psy10231 547 CLLAMVFIQAFLPETQG 563 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~~ 563 (607)
+++..+..++..||+++
T Consensus 177 ~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 177 AALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHhCCCCCc
Confidence 87777666666777653
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.12 E-value=1.9e-09 Score=110.73 Aligned_cols=162 Identities=10% Similarity=0.025 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCC
Q psy10231 387 MYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMD 465 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (607)
........|.+..+.+.+. +.+.......+...++.++.|+++||+|||+.+..+..+..++.+........
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~------- 87 (365)
T TIGR00900 15 TAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL------- 87 (365)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 3444555566666656543 35667777888899999999999999999999998887777766655543211
Q ss_pred CCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHH
Q psy10231 466 DRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSC 545 (607)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~ 545 (607)
.....+..+....+.+. ......+...+++.|.+|++.|+.+.|+.+....+|..+++.+.+.+.+..+|+..+++.+.
T Consensus 88 ~~~~~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 88 GGLNIWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred CCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 00122333333333332 23333466668999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHhhh
Q psy10231 546 ACLLAMVFIQA 556 (607)
Q Consensus 546 ~~~~~~~~~~~ 556 (607)
..++..++...
T Consensus 167 ~~~~~~~~~~~ 177 (365)
T TIGR00900 167 GFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHh
Confidence 66655544433
No 155
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.11 E-value=3e-09 Score=112.15 Aligned_cols=157 Identities=11% Similarity=0.004 Sum_probs=112.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHh
Q psy10231 375 LIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISG 453 (607)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~ 453 (607)
...+..+.............|.+.++.|.+.. .........++..++.++.|++.||+|||+.+..+.+..+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 101 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG 101 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33344444444445555566666667777543 56677778888999999999999999999999999988888877665
Q ss_pred hhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 454 TYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
+. ...+..++.-.+.+ .......+....++.|.+|++.|+.+.++......+|..+++.+.+.+.+.
T Consensus 102 ~~------------~~~~~l~~~r~l~G-~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 102 LA------------SGVIMLTLSRFIVG-MGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HH------------hHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 52 11222222222222 222233455668889999999999999999999999999999988888888
Q ss_pred hhhHHHHHHHH
Q psy10231 534 LNMGGMMWAFS 544 (607)
Q Consensus 534 ~g~~~~~~~~~ 544 (607)
.+|+..+++..
T Consensus 169 ~~w~~~f~i~~ 179 (426)
T PRK12307 169 YGWRAAFFVGL 179 (426)
T ss_pred CCHHHHHHHHH
Confidence 89998887643
No 156
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=2.9e-09 Score=113.02 Aligned_cols=163 Identities=10% Similarity=-0.027 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 390 VLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
+....|.+.++ +.+.. .+.......+...++.++.|+++||+|||+.+..+.++.+++.+.+++.... ..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~--------~~ 118 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--------TS 118 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc--------cc
Confidence 34556665555 76544 4667777888899999999999999999999998888887777666542100 01
Q ss_pred CChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc-HHHHHhhhhHHHHHHHHHHH
Q psy10231 469 LNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY-PDLMYLLNMGGMMWAFSCAC 547 (607)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~-~~l~~~~g~~~~~~~~~~~~ 547 (607)
..+..+....+.+.+.+ ...+.....+.|.+|++.|+.+.|+.+....+++.+.+++. ..+....+|+..|++.+.+.
T Consensus 119 ~~~~~~~~~~l~gi~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~ 197 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAA 197 (452)
T ss_pred cHHHHHHHHHHHHHHHh-ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 11222222222233222 23344446778899999999999999888888865444333 33333458888888888877
Q ss_pred HHHHHHhhhcccCCC
Q psy10231 548 LLAMVFIQAFLPETQ 562 (607)
Q Consensus 548 ~~~~~~~~~~~~~~~ 562 (607)
++..++..+++||+.
T Consensus 198 ~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 198 ILVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHHccCCH
Confidence 777666666767654
No 157
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.10 E-value=5.5e-09 Score=108.98 Aligned_cols=162 Identities=13% Similarity=0.064 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhcccc
Q psy10231 386 GMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELS 463 (607)
Q Consensus 386 ~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (607)
+.+....+.+.+++ +.|.+.. .+.......+...+..++.|+++||+|||+.+..+.....++.+.+...
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-------- 96 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-------- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--------
Confidence 34566666676664 4566443 4556666677777888999999999999999999988888887776541
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHH
Q psy10231 464 MDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAF 543 (607)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~ 543 (607)
+..+.......+.+.+. ....+...+++.|.+|++.|+++.|+.+...+++..++|.+.+.+. ..+|+..|++.
T Consensus 97 ----~~~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~ 170 (400)
T PRK11646 97 ----HEPWLLWLSCILSGLGG-TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATG 170 (400)
T ss_pred ----ccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 12233333333223222 2234555678889999999999999999999999999999999988 67898888888
Q ss_pred HHHHHHHHHHhhhcccCC
Q psy10231 544 SCACLLAMVFIQAFLPET 561 (607)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~ 561 (607)
+.+.++..++..+..||.
T Consensus 171 ~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHhCCcc
Confidence 877776666555556654
No 158
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.10 E-value=5.3e-09 Score=109.04 Aligned_cols=162 Identities=7% Similarity=-0.109 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCC
Q psy10231 389 IVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDR 467 (607)
Q Consensus 389 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (607)
......|.+.++.+.+.. .........+...++.++.|+++||+|||+.+..+.....++.+.....
T Consensus 26 ~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------------ 93 (394)
T PRK11652 26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA------------ 93 (394)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH------------
Confidence 334445777777777554 4667777888899999999999999999999988877777766655431
Q ss_pred CCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHH
Q psy10231 468 PLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCAC 547 (607)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~ 547 (607)
+..+..+....+.+.+.+ ...+....+..|.++.+.++.+.+..+....++..++|.+.+.+.+..+|+..|++.+...
T Consensus 94 ~~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~ 172 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLG 172 (394)
T ss_pred ccHHHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 112222222222222222 2234445677888898999999999999889999999999999888889999998887777
Q ss_pred HHHHHHhhhcccCCCC
Q psy10231 548 LLAMVFIQAFLPETQG 563 (607)
Q Consensus 548 ~~~~~~~~~~~~~~~~ 563 (607)
++..++..++.||+++
T Consensus 173 ~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 173 AGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHhCCccCc
Confidence 6665555556677543
No 159
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.10 E-value=4e-10 Score=116.49 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=120.2
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+.+.+++.|++.+...+
T Consensus 229 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 308 (375)
T TIGR00899 229 ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308 (375)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999998888778888899999999999999999888777666666666778888888999999999999888
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHhcCC
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMHAVP 197 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~~~p 197 (607)
...++.|..|+ +|+++.++.+....+|..+++.+++.+ +|+..|++.++..++..+...+++
T Consensus 309 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 309 GMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 88999998875 566999999999999999999988876 899999999888877776555444
No 160
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=2.7e-09 Score=110.48 Aligned_cols=162 Identities=13% Similarity=0.053 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.......|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+.+..+++...+...
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~----------- 76 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA----------- 76 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 3344556777777777543 5667777888899999999999999999999999888888877766542
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCA 546 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~ 546 (607)
...+.......+.+ .+.....+....++.|.+|++.|+++.++.+....++..+++.+.+.+.+..+|+..+++.+.+
T Consensus 77 -~~~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 154 (377)
T PRK11102 77 -QTIDQLIYMRFLHG-LAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALA 154 (377)
T ss_pred -ccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 11222222222222 2222334555688899999999999999999999999999999999999988999899888888
Q ss_pred HHHHHHHhhhcccCCC
Q psy10231 547 CLLAMVFIQAFLPETQ 562 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~ 562 (607)
+++..++..+..||++
T Consensus 155 ~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 155 AILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHhCCccC
Confidence 8777776666667654
No 161
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=6.1e-09 Score=109.42 Aligned_cols=159 Identities=11% Similarity=0.039 Sum_probs=113.7
Q ss_pred hhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhccc-CCchhHHHhhHHHHHHHHHHhhhhhhh
Q psy10231 383 EASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQMF-SRRALATTSAFFMALSMGISGTYEYYF 459 (607)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~-grr~~l~~~~~~~~~~~~~~~~~~~~~ 459 (607)
....++.+..++|.++.+ .|++.. +............++.+++|+++||+ |||+.+..+.++..++.++++..
T Consensus 21 e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~---- 96 (493)
T PRK15462 21 EYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS---- 96 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----
Confidence 444578888899999865 477544 45566667777788999999999998 99999999988888887655431
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc--chhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhH
Q psy10231 460 SELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS--VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMG 537 (607)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~ 537 (607)
. ...............+.+ ...+...++++|.+|++ .|.++.++.++..++|+.++|.+.+.+.+..||+
T Consensus 97 ------~-~~~~~~~l~l~li~iG~G-~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 97 ------E-IHPSFLYLSLAIIVCGYG-LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred ------h-cchhHHHHHHHHHHHhcc-cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 0 111112222222222222 22344558899999986 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10231 538 GMMWAFSCACLLAMVF 553 (607)
Q Consensus 538 ~~~~~~~~~~~~~~~~ 553 (607)
..|...++..+++.+.
T Consensus 169 ~~F~iaaigm~l~li~ 184 (493)
T PRK15462 169 MGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888766555544444
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.08 E-value=2.4e-09 Score=113.19 Aligned_cols=162 Identities=11% Similarity=-0.037 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 390 VLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
+....|.+. +.|.+.+ .+.......++..++.++.|++.||+|||+.+..+.++.+++.+..+... . ..
T Consensus 46 ~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~------~~ 115 (438)
T TIGR00712 46 FALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVP---W------AT 115 (438)
T ss_pred HHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccc---c------cc
Confidence 344455554 4476544 46677788888999999999999999999998888777777766554321 0 01
Q ss_pred CChH-HHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH-hhhhHHHHHHHHHH
Q psy10231 469 LNWI-PLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY-LLNMGGMMWAFSCA 546 (607)
Q Consensus 469 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~-~~g~~~~~~~~~~~ 546 (607)
.... ......+.+.+.+. ..+.....+.|.+|++.|++++|+.++...+++.+++.+.+...+ ..+|+..|++.+.+
T Consensus 116 ~~~~~l~~~~~l~g~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~ 194 (438)
T TIGR00712 116 SSIAIMFVLLFLNGWFQGM-GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAIC 194 (438)
T ss_pred chHHHHHHHHHHHHHHhhc-chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 1122 22222222222222 234445777899999999999999999999999999888776554 46899999988888
Q ss_pred HHHHHHHhhhcccCCC
Q psy10231 547 CLLAMVFIQAFLPETQ 562 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~ 562 (607)
+++..++.+++.||++
T Consensus 195 ~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 195 AIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHHHHhccCCH
Confidence 8877766666667653
No 163
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.07 E-value=3e-09 Score=104.23 Aligned_cols=96 Identities=21% Similarity=0.272 Sum_probs=82.2
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGR 122 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R 122 (607)
-++.+-.+.+ +.+.++.|++.+....+...++...+.|.++||+|||+.-++.+++++++++ +-.++|++.++++|
T Consensus 53 QGpY~Y~LY~---~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GR 128 (354)
T PF05631_consen 53 QGPYLYALYE---SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGR 128 (354)
T ss_pred hcchhHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHH
Confidence 3444444444 8899999999999999999999999999999999999999999999999885 55679999999999
Q ss_pred HHHhhhhhhHhh-h-HhHHhhc
Q psy10231 123 FITGMAIGMSSA-C-YVYVAEI 142 (607)
Q Consensus 123 ~l~G~g~g~~~~-~-~~~i~e~ 142 (607)
++.|++....+. - .-++.|.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888 4 4455665
No 164
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.06 E-value=6.4e-09 Score=106.78 Aligned_cols=162 Identities=14% Similarity=0.005 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
..+....|.+.++.+.+.. .+.....+.++..++.+..|++.||+|||+.+.........+......
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~------------ 75 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLD------------ 75 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH------------
Confidence 4455666777777777654 466777778888999999999999999998766544433333211111
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCA 546 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~ 546 (607)
....+..+..-.+.+.+. +..........|.+|+++|++++++.+....+|..+++.+.+.+.+..||+..|.+.+.+
T Consensus 76 ~~~~~~l~~~R~l~G~g~--~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l 153 (368)
T TIGR00903 76 PFNYEWLLACQLLAALGQ--PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAV 153 (368)
T ss_pred hccHHHHHHHHHHHHhHh--HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 011122222222222222 223334456689999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhhcccCCCC
Q psy10231 547 CLLAMVFIQAFLPETQG 563 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~~ 563 (607)
.++..++.++.+||.++
T Consensus 154 ~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 154 AAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 88887777778887643
No 165
>PRK12382 putative transporter; Provisional
Probab=99.05 E-value=7.6e-10 Score=115.29 Aligned_cols=130 Identities=14% Similarity=0.068 Sum_probs=117.0
Q ss_pred chhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhh
Q psy10231 63 DASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAE 141 (607)
Q Consensus 63 ~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e 141 (607)
+.++..+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++.+.+++.+++.|++.+...+ ..+.+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 250 MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 356667778888899999999999999999999999999999988888889999889999999999999988 8889999
Q ss_pred ccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHH
Q psy10231 142 ICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 142 ~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~ 192 (607)
.+++++|+++.++.+....+|..+++.+.+.+ ||+..|.+.+...++..+.
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877 8999999998887776654
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.05 E-value=6e-09 Score=112.19 Aligned_cols=159 Identities=12% Similarity=0.086 Sum_probs=114.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
.+....+..+.............|.+.++.|.+.. .........++..++.++.|++.||+|||+.+..+.+..+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33344444444444455566667777777777543 45667777788889999999999999999999988888877777
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
..++. .+.+..... ..+.+....+..+....++.|.+|++.|+.+.++......+|..+++.+.+.+
T Consensus 101 ~~~~~------------~~~~~l~~~-~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 101 ACGFA------------PGYWTLFIA-RLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHH------------hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66652 112222222 22223333334455668889999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHH
Q psy10231 531 MYLLNMGGMMWAF 543 (607)
Q Consensus 531 ~~~~g~~~~~~~~ 543 (607)
.+..+|+..|++.
T Consensus 168 ~~~~~w~~~f~~~ 180 (496)
T PRK03893 168 VPVWGWRALFFIG 180 (496)
T ss_pred hccCCHHHHHHHH
Confidence 9989999877654
No 167
>PRK11043 putative transporter; Provisional
Probab=99.04 E-value=1.7e-08 Score=105.41 Aligned_cols=151 Identities=8% Similarity=-0.064 Sum_probs=107.8
Q ss_pred HHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChH
Q psy10231 394 AVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWI 472 (607)
Q Consensus 394 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (607)
.|.+.++.+.+.. ......+..++..++.++.|+++||+|||+.+..+..+..++.+..... ...+.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------~~~~~ 96 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV------------ESAAQ 96 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh------------cCHHH
Confidence 3444566676543 5667777888889999999999999999999988877777666655441 12222
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy10231 473 PLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMV 552 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 552 (607)
.+....+.+.+.. ...+....+..|.+|++.++...+..+....++..++|.+.+.+.+..+|+..+++.+.+.++..+
T Consensus 97 l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 175 (401)
T PRK11043 97 LLVLRFVQAVGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL 175 (401)
T ss_pred HHHHHHHHHhhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 2222222222211 222334467889999998999999999889999999999999999999999888888877777666
Q ss_pred Hhhhc
Q psy10231 553 FIQAF 557 (607)
Q Consensus 553 ~~~~~ 557 (607)
...+.
T Consensus 176 ~~~~~ 180 (401)
T PRK11043 176 PTLRL 180 (401)
T ss_pred HHHHc
Confidence 55444
No 168
>PRK03699 putative transporter; Provisional
Probab=99.04 E-value=1.7e-08 Score=105.24 Aligned_cols=170 Identities=5% Similarity=-0.114 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
....+.+.++........+....|.+.++.+.+.. .........++..++.++.|++.||+|||+.+..+....+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 87 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 33333344443333345666677888777777654 45666777888899999999999999999999888887777776
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
+..+. +..+..+....+.+.+.+. ..+....++.|.+|++.|+.+.+..+....+++.++|.+.+.+
T Consensus 88 l~~~~------------~~~~~~~~~~~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 88 GLMFS------------HSLALFSIAMFVLGVVSGI-TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHc------------chHHHHHHHHHHHHHhhHh-hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66541 1122222222232332222 2344557888999999999999998888889999999888877
Q ss_pred HH-hhhhHHHHHHHHHHHHHHHHHh
Q psy10231 531 MY-LLNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 531 ~~-~~g~~~~~~~~~~~~~~~~~~~ 554 (607)
.+ ..+|+..|...+.+.++..++.
T Consensus 155 ~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 155 LARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHH
Confidence 65 4689988888777766655443
No 169
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.04 E-value=9.5e-10 Score=115.56 Aligned_cols=155 Identities=13% Similarity=0.074 Sum_probs=129.6
Q ss_pred cccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHH
Q psy10231 45 ILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFI 124 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l 124 (607)
...|.+.+. .+|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++..++.++.++.++.+.+.++.++
T Consensus 244 ~~~p~~~~~--~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 244 VLYPALADE--VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HhhHHHHHh--ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 344555441 388899999999999999999999999999999888888888888888888888888988888899999
Q ss_pred HhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHH-HHHhcCCC
Q psy10231 125 TGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGF-AAMHAVPE 198 (607)
Q Consensus 125 ~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~-~~~~~~pe 198 (607)
.|++.+...+ ..+++.|..|+++||++.+++.....+|..+|+.+.+.+ |++..+++.+...++.. +..+.+||
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 9999998888 889999999999999999999999999999999988877 67777777666655544 33466677
Q ss_pred Chh
Q psy10231 199 TPS 201 (607)
Q Consensus 199 s~~ 201 (607)
.++
T Consensus 402 ~~~ 404 (417)
T PRK10489 402 LRR 404 (417)
T ss_pred ccc
Confidence 654
No 170
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.03 E-value=9.7e-09 Score=109.32 Aligned_cols=162 Identities=7% Similarity=-0.043 Sum_probs=118.4
Q ss_pred HHHhhhhhHHHHHHHHHHHHHH---hCCCc-chHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHHHHHHHHh
Q psy10231 379 FLFQEASGMYIVLYYAVNFFED---AGSSL-DDYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMALSMGISG 453 (607)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~~~~~~~~ 453 (607)
..+.+..+++....++|.++++ .|.+. +++.......+...++.+++|+++|| +|||+.+..+..+.+++.++++
T Consensus 18 ~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 18 VELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 3334445577888889999875 46644 35677788888899999999999999 8999999999998888887776
Q ss_pred hhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc---hhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 454 TYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV---RGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
+. ...+.......+ .........+...++.+|.+|++. |+.+.++.+...++|..+++.+.+.+
T Consensus 98 ~~------------~~~~~~~~~~~l-~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 98 MS------------IYPDLIFYGLGT-IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred hc------------ccHhHHHHHHHH-HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 51 111222222222 222222234556678889998754 88899999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHH
Q psy10231 531 MYLLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 531 ~~~~g~~~~~~~~~~~~~~~~~~ 553 (607)
.++.||+..|...+..++++.+.
T Consensus 165 ~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 165 AENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHhcChHHHHHHHHHHHHHHHHH
Confidence 99889998888877655554433
No 171
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.03 E-value=9e-09 Score=106.05 Aligned_cols=167 Identities=19% Similarity=0.066 Sum_probs=112.9
Q ss_pred hhhhhHHHHHHHHHH-HHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhh
Q psy10231 382 QEASGMYIVLYYAVN-FFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYF 459 (607)
Q Consensus 382 ~~~~~~~~~~~~~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~ 459 (607)
..+...+....+.|. +.++.|.+.. .+.......++..++.++.|+++||+|||+.+..+.++..++.+..+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~--- 88 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV--- 88 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh---
Confidence 334445667777785 4456677554 46677788889999999999999999999999999888888877665521
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh------
Q psy10231 460 SELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL------ 533 (607)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~------ 533 (607)
...+..+....+.+.+ . +..+....++.|.+|++.|+.+.++.....++|..+++.+.+.+...
T Consensus 89 --------~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 158 (366)
T TIGR00886 89 --------QSYSVLLLLRLFIGIA-G-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAG 158 (366)
T ss_pred --------hhHHHHHHHHHHHHHh-c-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Confidence 0222222222222222 2 22344557889999999999999999988888888888877766653
Q ss_pred ----hhhHHHH-HHHHHHHHHHHHHhhhcccCC
Q psy10231 534 ----LNMGGMM-WAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 534 ----~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.+|++.+ ...+.+..+..++.....+|+
T Consensus 159 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 159 LPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3677777 333444444444444444554
No 172
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.03 E-value=5.1e-09 Score=91.23 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhh
Q psy10231 414 VAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPW 493 (607)
Q Consensus 414 ~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (607)
..++.+++.++.+++.||+|||+.+..+.....++.+..... ...+.......+.+... ....+...
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~-~~~~~~~~ 73 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS------------SNITVLIIARFLQGFGA-AFALVAGA 73 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHH-HHHHHhHH
Confidence 456778889999999999999999888877777666555431 12222233233333222 23345666
Q ss_pred hhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 494 VMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 494 ~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
.+..|.+|++.|+++.++.+....++..+++.+.+.+.+..+++..+++.+...++..+...+..||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 88899999999999999999999999999999999999888888888888888777777766665653
No 173
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.02 E-value=2.2e-08 Score=101.00 Aligned_cols=154 Identities=17% Similarity=0.231 Sum_probs=126.7
Q ss_pred ccccccCCCcccccCccchh-HHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHH
Q psy10231 46 LIPQLQKPSSIISISSDDAS-WIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFI 124 (607)
Q Consensus 46 ~~p~l~~~~~~~~~s~~~~~-~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l 124 (607)
+.|.+.+. +.|+++.|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+.-+.++...+-+..++
T Consensus 26 l~~yL~~~--~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 26 LTPYLTGP--DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred chHHHcCC--ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 33444442 3688887764 55566677788889999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh------hHHHHHHHhHHHHHHHHHHHhcCCC
Q psy10231 125 TGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV------TWQYTSAACAVVALVGFAAMHAVPE 198 (607)
Q Consensus 125 ~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------~Wr~~f~~~~~~~~~~~~~~~~~pe 198 (607)
.|++.+....-.+|+-...++++-.++.+......-+|..++.++|..+ +++...++......++++..+++|.
T Consensus 104 yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 104 YGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999777888888888999888999999999999999999998877 6777777766666666666677776
Q ss_pred Chh
Q psy10231 199 TPS 201 (607)
Q Consensus 199 s~~ 201 (607)
.++
T Consensus 184 ~~~ 186 (412)
T PF01770_consen 184 PKR 186 (412)
T ss_pred CCc
Confidence 654
No 174
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.02 E-value=6.7e-09 Score=110.20 Aligned_cols=158 Identities=13% Similarity=0.093 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
+.+..+.+.+.++.|.+.. .........+...++.++.|+++||+|||+.++.+..+..++.+..++.
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------- 104 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS----------- 104 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh-----------
Confidence 4456667777777777543 4556666666778888999999999999999998887777776665542
Q ss_pred CCCChHHHHHH-HHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHH
Q psy10231 467 RPLNWIPLACI-LANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSC 545 (607)
Q Consensus 467 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~ 545 (607)
...+..+... .+.+.+.+.. .+....++.+.+| +.|+.+.|+.+....++..+++.+.+.+.+..||+..|++.++
T Consensus 105 -~~~~~l~~~~~~l~G~~~~~~-~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~ 181 (455)
T TIGR00892 105 -SNVIELYLTAGFITGLGLAFN-FQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGG 181 (455)
T ss_pred -hhHHHHHHHHHHHHHhcchhh-hhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 1112222111 1212222222 2334466778886 6899999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhhhccc
Q psy10231 546 ACLLAMVFIQAFLP 559 (607)
Q Consensus 546 ~~~~~~~~~~~~~~ 559 (607)
+.++..+..++..+
T Consensus 182 ~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 182 LLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHHhCC
Confidence 87766555444433
No 175
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.02 E-value=3.2e-08 Score=106.57 Aligned_cols=146 Identities=13% Similarity=0.000 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCC--ChHHHHHHHHHHHHHH
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPL--NWIPLACILANVCASM 485 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 485 (607)
+.......++.+++.++.+++.||+|||+.+..+.++..++.++.+.... .... .+..+..-++.+. ..
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~r~l~G~-~~ 129 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG--------SSPKSVMATLCFWRFWLGV-GI 129 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC--------cccchHHHHHHHHHHHHHH-HH
Confidence 45677778889999999999999999999998888888777766554210 0000 1222222233232 23
Q ss_pred hccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH-----------------------hhhhHHHHHH
Q psy10231 486 LGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY-----------------------LLNMGGMMWA 542 (607)
Q Consensus 486 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~-----------------------~~g~~~~~~~ 542 (607)
.+..+....+..|.+|++.|+.+.++.+....+|..+++.+...+.. ..+|+..+.+
T Consensus 130 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 130 GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 33346667999999999999999999999999999888877665432 1368877765
Q ss_pred HHHHHHHHHHHhhhcccCCCC
Q psy10231 543 FSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.+..+++.. +..+++||+.+
T Consensus 210 ~~ip~~i~~-~~~~~lpESpr 229 (502)
T TIGR00887 210 GAVPALLAL-YFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHH-HHHHhCCCCHH
Confidence 555554443 33466799744
No 176
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.01 E-value=9e-09 Score=107.54 Aligned_cols=166 Identities=8% Similarity=-0.106 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccC
Q psy10231 386 GMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSM 464 (607)
Q Consensus 386 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (607)
+.+....+.+.++++.|.+. +.+.......+...++.++.|++.||+|||+.+..+..+..++.+........
T Consensus 28 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~------ 101 (402)
T TIGR00897 28 GDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLG------ 101 (402)
T ss_pred hhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 34445567777777777754 45677788889999999999999999999999998888777765543221000
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHH-HHHhhhcHHHHHhhhhHHHHHHH
Q psy10231 465 DDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFI-FTTVKMYPDLMYLLNMGGMMWAF 543 (607)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~-~i~~~i~~~l~~~~g~~~~~~~~ 543 (607)
....+..+....+.+.+.. ...+.....+.+.+|+++|+++.|+.++...+|. ..++.+.+.+.+..|+...++..
T Consensus 102 --~~~~~~l~~~~~i~G~g~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~ 178 (402)
T TIGR00897 102 --HANYPLILLFYGIRGLGYP-LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSA 178 (402)
T ss_pred --CccHHHHHHHHHHHHcchH-HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 0112222222222222221 1223334567788899999999999999999886 57888888888877765555544
Q ss_pred HHHHHHHHHHhhhcccC
Q psy10231 544 SCACLLAMVFIQAFLPE 560 (607)
Q Consensus 544 ~~~~~~~~~~~~~~~~~ 560 (607)
.....+..++..++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 179 LAFVLTGGVIALFSNKD 195 (402)
T ss_pred HHHHHHHHHHHHhccCC
Confidence 44434444444444443
No 177
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.00 E-value=7.3e-09 Score=110.64 Aligned_cols=145 Identities=14% Similarity=-0.024 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHh
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASML 486 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (607)
.+.......++..++.++.|++.||+|||+.+..+..+..++.++..... .....+..++.-.+.+.+. .
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~r~l~G~~~-~ 142 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAA---------FALSVEMLIVGRVLLGIGV-G 142 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhc---------cccchHHHHHHHHHHHhhh-h
Confidence 46677788889999999999999999999999988888777776664421 0111123333333333322 2
Q ss_pred ccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc---HHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 487 GMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY---PDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 487 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~---~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
...+....++.|.+|++.|+.+.++.+....+|..+++.+. +...+..+|+..|++.+...++.. +..+++||+.
T Consensus 143 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 143 IASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred HHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 33455668899999999999999999999999999999888 555567789988888555554443 3445567763
No 178
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.99 E-value=1.4e-09 Score=112.86 Aligned_cols=144 Identities=15% Similarity=0.118 Sum_probs=118.6
Q ss_pred cccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHH
Q psy10231 45 ILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFI 124 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l 124 (607)
..+|...+ +.+.+.++.+++.+...++..+++++.|++.||+|||+++..+..+..++.+... +.......+++
T Consensus 221 ~~lp~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~l 294 (381)
T PRK03633 221 GLMPLYLN---HQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMAPALFI 294 (381)
T ss_pred HHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHH
Confidence 34566555 5688888999999999999999999999999999999999888888777665443 23344567888
Q ss_pred HhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHHh
Q psy10231 125 TGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAMH 194 (607)
Q Consensus 125 ~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~~ 194 (607)
.|++.....| ..+.+.|..|+++++...+......++|..+||.+++.+ +|++.|.+.+...++..+..+
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 8988888889 999999999998888888888888999999999999887 899999998888877665443
No 179
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.99 E-value=9.4e-08 Score=99.45 Aligned_cols=180 Identities=13% Similarity=0.064 Sum_probs=113.9
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 373 FILIGFFLFQEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
+....+.+...+...+......+.+-+ +.+++.+ ......+..+...+..+..|++.||+|.|+++..+..+..+..+
T Consensus 36 l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~ 115 (462)
T PRK15034 36 LWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCV 115 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 333334444443334444444444444 4566543 45566777788888889999999999999999988888877776
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
..++.... ..++.+..++.-.+.+.+ .+..+.....+++.+|++.||++.|+....+++|..+++.+.+.+
T Consensus 116 ~~~~a~~~-------~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 116 WLGIAVQN-------PNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHcc-------cCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 66542100 001222223322222222 224455668889999999999999999888888887776666654
Q ss_pred H-----H-------------hhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 531 M-----Y-------------LLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 531 ~-----~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
. . ..+++.+.+++..+.++..++.+++.++.
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4 2 33456666677777777777766665554
No 180
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.98 E-value=5.9e-09 Score=111.16 Aligned_cols=163 Identities=10% Similarity=-0.163 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 390 VLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
+....|.+.++.+.+.. .+.....+.++..++.++.|+++||+|||+.+..+.+..++..+.++....... .
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~-------~ 120 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGS-------V 120 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhccc-------c
Confidence 34446777777777544 466777788888999999999999999999998887777776666554221110 1
Q ss_pred CChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh---hhHHHHHHHHH
Q psy10231 469 LNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL---NMGGMMWAFSC 545 (607)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~---g~~~~~~~~~~ 545 (607)
..+..+..-.+.+.+.+ ...+....++.|.+|++.|+.++|+......+|..+++.+...+.+.. +|...|.+.+.
T Consensus 121 ~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 121 SLGLMIALWALSGFFQS-TGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred hHHHHHHHHHHHHHHHh-ccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 22223333333333323 334666689999999999999999999999999999988876665543 46666766666
Q ss_pred HHHHHHHHhhhcccC
Q psy10231 546 ACLLAMVFIQAFLPE 560 (607)
Q Consensus 546 ~~~~~~~~~~~~~~~ 560 (607)
+.++.+++.+++.++
T Consensus 200 ~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 200 IALIIGFIGLRYGSD 214 (467)
T ss_pred HHHHHHHHHHHhCCC
Confidence 666655555555443
No 181
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.98 E-value=2.1e-09 Score=111.45 Aligned_cols=141 Identities=15% Similarity=0.178 Sum_probs=123.7
Q ss_pred ccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHH
Q psy10231 46 LIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFIT 125 (607)
Q Consensus 46 ~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~ 125 (607)
..|...+ |+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.+...+..++.++++|.+.+++.+++.
T Consensus 227 ~~~~~l~---~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 227 FSAIYWQ---AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHH---HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 4454445 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhh-hHhHHhhccCCCccccccchhh-HHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 126 GMAIGMSSA-CYVYVAEICLPNDRGYLSAFGP-VFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 126 G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
|+..+...+ ...++.+. |+++|++..++++ ...++|..+++.+++.+ ++ ..|++.+.++++..+
T Consensus 304 g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 304 CGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 999999999 99999998 9999999999886 57788999999998888 64 556666666665544
No 182
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.97 E-value=4.1e-08 Score=105.25 Aligned_cols=154 Identities=16% Similarity=0.016 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHh
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASML 486 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (607)
.........++.+++.++.|+++||+|||+.+..+..+..++.+..++........ ..++......+...-.+.+....
T Consensus 57 ~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~R~l~G~~~g 135 (479)
T PRK10077 57 LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSI-GPDNTGYVPEFVIYRIIGGIGVG 135 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccc-cccchhHHHHHHHHHHHHhhhHh
Confidence 45677788889999999999999999999999999888877766555411100000 00001111222222233333333
Q ss_pred ccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHH--------HhhhhHHHHHHHHHHHHHHHHHhhhcc
Q psy10231 487 GMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLM--------YLLNMGGMMWAFSCACLLAMVFIQAFL 558 (607)
Q Consensus 487 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 558 (607)
+..+...+++.|.+|++.|+.++++......+|..+++.+.+.+. +..+|+..|++.+...++..+. .+++
T Consensus 136 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l 214 (479)
T PRK10077 136 LASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFV 214 (479)
T ss_pred HHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcC
Confidence 445666789999999999999999999888888888766544332 3468998888877766665544 5567
Q ss_pred cCCC
Q psy10231 559 PETQ 562 (607)
Q Consensus 559 ~~~~ 562 (607)
||+.
T Consensus 215 ~~s~ 218 (479)
T PRK10077 215 PETP 218 (479)
T ss_pred CCCc
Confidence 8864
No 183
>KOG1330|consensus
Probab=98.96 E-value=6.6e-10 Score=111.07 Aligned_cols=155 Identities=12% Similarity=-0.008 Sum_probs=125.1
Q ss_pred hCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHH
Q psy10231 401 AGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILA 479 (607)
Q Consensus 401 ~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (607)
.+.+. ..+++...+.+..++++++.|++.||+.|++++..|..+-.++.+..++.. ....+...=.
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~-------------~Fwq~~l~R~ 129 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN-------------HFWQVLLCRG 129 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH-------------HHHHHHHHHH
Confidence 34433 357788888899999999999999999999999999998888888877742 2223333344
Q ss_pred HHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-hHHHHHHHHHHHHHHHHHhhhcc
Q psy10231 480 NVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN-MGGMMWAFSCACLLAMVFIQAFL 558 (607)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 558 (607)
+.+..-....|+...+++|.+|..+|+++.++.+.....|..+|-.+...+.+..+ |+++|...+++.++..++..++.
T Consensus 130 ~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 130 FVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred HhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 44455566778888999999999999999999999999999998888877777766 89999999999999999988888
Q ss_pred cCCCCCCHHH
Q psy10231 559 PETQGKTLLE 568 (607)
Q Consensus 559 ~~~~~~~~~~ 568 (607)
+|..++..++
T Consensus 210 ~eP~rga~~~ 219 (493)
T KOG1330|consen 210 REPERGARDE 219 (493)
T ss_pred cCcccccccc
Confidence 8887664443
No 184
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.94 E-value=2.7e-08 Score=105.97 Aligned_cols=164 Identities=13% Similarity=0.077 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHH
Q psy10231 370 KPFFILIGFFLFQEASGMYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMA 446 (607)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~ 446 (607)
+.+...+... +..-.+++....+++.|+++ .|.+.. .......+.....+..+++|+++|| +|||+.+..+.++..
T Consensus 14 ~~~~~~~~~~-~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 14 RPFFMIFFVE-LWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 3344433333 33445577788888888764 566544 4445555555666677899999999 999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc--hhhHHHHHHHHHHHHHHHHh
Q psy10231 447 LSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV--RGIMGGIVCSLGYLFIFTTV 524 (607)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~g~~~~~~~~~~~i~~ 524 (607)
++.+.+++.. .. ...+...............|...+++.|.+|++. |+.+.++.+...++|..++|
T Consensus 93 ~g~~~~~~~~-----------~~-~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~ 160 (489)
T PRK10207 93 IGYFMTGMSL-----------LK-PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISL 160 (489)
T ss_pred HHHHHHHHhc-----------cc-hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHH
Confidence 9887776521 11 1112122222223333344566689999998874 47789999999999999999
Q ss_pred hhcHHHHHhhhhHHHHHHHHHH
Q psy10231 525 KMYPDLMYLLNMGGMMWAFSCA 546 (607)
Q Consensus 525 ~i~~~l~~~~g~~~~~~~~~~~ 546 (607)
.+.|.+.++.||+..|++.++.
T Consensus 161 ~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 161 SLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHHHHHHHhhChHHHHHHHHHH
Confidence 9999999999999888875443
No 185
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.93 E-value=4.1e-09 Score=109.51 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=111.5
Q ss_pred ccccccc-CCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHH--HHHHh--ccchhHHH
Q psy10231 45 ILIPQLQ-KPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGW--TIITV--SKGFTLLC 119 (607)
Q Consensus 45 ~~~p~l~-~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~--~~~a~--a~~~~~l~ 119 (607)
...|.+. + +++.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.++
T Consensus 240 ~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (394)
T TIGR00883 240 TYLPTYLTQ---TLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFF 316 (394)
T ss_pred HHHHHHHHH---hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 4445544 4 678899999999999999999999999999999999998876555444333 22222 25677778
Q ss_pred HHHHHHhhhhhhHhh-hHhHHhhccCCCccccccch-hhHHHHHHHHHHHHHhhhh----h-HHHHHHHhHHHHHH
Q psy10231 120 VGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAF-GPVFVSLGVLIVYSLGYIV----T-WQYTSAACAVVALV 188 (607)
Q Consensus 120 ~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l----~-Wr~~f~~~~~~~~~ 188 (607)
...++.|++.+...+ ..+++.|.+|+++|+++.++ ...+..+|..++|.+++.+ + |++.++..+...++
T Consensus 317 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l~ 392 (394)
T TIGR00883 317 FLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALALI 392 (394)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 889999999999999 99999999999999999998 4566778888888888877 5 88887776665543
No 186
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.93 E-value=9.4e-08 Score=102.40 Aligned_cols=157 Identities=10% Similarity=-0.038 Sum_probs=104.6
Q ss_pred hhhhhHHHHHHHHHHHHH-HhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHHHHHHHHhhhhhh
Q psy10231 382 QEASGMYIVLYYAVNFFE-DAGSSLD-DYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMALSMGISGTYEYY 458 (607)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~~~~~~~~~~~~~ 458 (607)
....+++....+.+.+++ +.|.+.. +...............+++|++.|| +|||+.+..+..+..++..++++..
T Consensus 32 ~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~-- 109 (500)
T PRK09584 32 WERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG-- 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc--
Confidence 344456778888888884 4576543 3333333333444445689999999 5999999999888888776665410
Q ss_pred hccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc--hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhh
Q psy10231 459 FSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV--RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNM 536 (607)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~ 536 (607)
+..+.......+.+.+. ....+...++..|.+|++. |..+.++.+...++|..++|.+.+++.+..||
T Consensus 110 ---------~~~~~l~~~~~l~gig~-g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~ 179 (500)
T PRK09584 110 ---------HDAGIVYMGMATIAVGN-GLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGW 179 (500)
T ss_pred ---------ccHHHHHHHHHHHHHhh-hcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 11112222222222222 2234555578899998653 45678888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10231 537 GGMMWAFSCACLLA 550 (607)
Q Consensus 537 ~~~~~~~~~~~~~~ 550 (607)
+..|.+.++...++
T Consensus 180 ~~~F~i~~i~~~i~ 193 (500)
T PRK09584 180 SVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888876544443
No 187
>PRK09952 shikimate transporter; Provisional
Probab=98.93 E-value=1.1e-08 Score=107.95 Aligned_cols=145 Identities=11% Similarity=0.011 Sum_probs=110.3
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh---c-cchhHHHHHHHHHhhhhhh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV---S-KGFTLLCVGRFITGMAIGM 131 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~---a-~~~~~l~~~R~l~G~g~g~ 131 (607)
++|.++.....+.....+...++.++.|+++||+|||++++.+.++..++.+.... . ++.+.+++..++.|++.+.
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 67777776666666666777888899999999999999998887766555443322 2 2344555567777899888
Q ss_pred Hhh-hHhHHhhccCCCccccccchh-hHHHHHHHHHHHHHhhhh------hHHHHHHHhHHHHHHHHHHHhcCCCCh
Q psy10231 132 SSA-CYVYVAEICLPNDRGYLSAFG-PVFVSLGVLIVYSLGYIV------TWQYTSAACAVVALVGFAAMHAVPETP 200 (607)
Q Consensus 132 ~~~-~~~~i~e~~~~~~r~~~~~~~-~~~~~lG~~ig~~l~~~l------~Wr~~f~~~~~~~~~~~~~~~~~pes~ 200 (607)
..+ ..+++.|.+|.+.|+...++. ..+..+|..++|.+.+.+ +|+..+...++..++..+..+.+||+.
T Consensus 360 ~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 360 VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 888 899999999999998888884 445568888888888776 488888888888887777766677754
No 188
>KOG3762|consensus
Probab=98.92 E-value=1.9e-08 Score=102.26 Aligned_cols=156 Identities=12% Similarity=0.047 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCC
Q psy10231 387 MYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMD 465 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (607)
...+.+++--.+++.+.... -+........+.++..++.++++.|+|+-+++..++...++-++.+...
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L---------- 456 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL---------- 456 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh----------
Confidence 44445555445566553222 3455566667788889999999999999999999888888877766553
Q ss_pred CCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHH-HHHHHHHhhhcHHHHHhhhhHHHHHHHH
Q psy10231 466 DRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLG-YLFIFTTVKMYPDLMYLLNMGGMMWAFS 544 (607)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~~~~~i~~~i~~~l~~~~g~~~~~~~~~ 544 (607)
.+.|.++..=++-+......+..+ .+|+..+.|++.|+++.++..... .+|-.+|+++.|.+.+.++-...|.+++
T Consensus 457 --~n~W~vLPieilqgit~aliWaa~-~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~g 533 (618)
T KOG3762|consen 457 --QNPWMVLPIEILQGITHALIWAAI-ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFG 533 (618)
T ss_pred --cCchheeeHHHHHHHHHHHHHHHH-HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHH
Confidence 344555554455555555555444 489999999999999999987665 4788889999999999999998999988
Q ss_pred HHHHHHHHHhh
Q psy10231 545 CACLLAMVFIQ 555 (607)
Q Consensus 545 ~~~~~~~~~~~ 555 (607)
+.+++..++..
T Consensus 534 iAcl~~l~~~~ 544 (618)
T KOG3762|consen 534 IACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHH
Confidence 88877666544
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.92 E-value=4.7e-08 Score=101.73 Aligned_cols=155 Identities=12% Similarity=0.036 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 390 VLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
.....+...++.+.+.. .......+.+...+..++.|++.||+|||+++..+..+.+++.+.+...
T Consensus 22 ~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~------------- 88 (393)
T PRK11195 22 LLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG------------- 88 (393)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------------
Confidence 33444445556555443 4666777788889999999999999999999999988877766554331
Q ss_pred CChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHH
Q psy10231 469 LNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACL 548 (607)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~ 548 (607)
... +..- ...+.......|...+++.|.+|+++|+++.|+......++..++|.+.|.+.+.. +...+.+.+...+
T Consensus 89 ~~~--~~~r-~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~ 164 (393)
T PRK11195 89 IHP--LLAY-GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYL 164 (393)
T ss_pred HHH--HHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 111 1111 22333344456777799999999999999999999999999999999999988854 5545555444433
Q ss_pred HHHHHhhhcccCCC
Q psy10231 549 LAMVFIQAFLPETQ 562 (607)
Q Consensus 549 ~~~~~~~~~~~~~~ 562 (607)
++ .+..+.+||.+
T Consensus 165 ~~-~~~~~~l~~~~ 177 (393)
T PRK11195 165 LA-ALFNLFIPRLG 177 (393)
T ss_pred HH-HHHHhcCCCCc
Confidence 33 33345667653
No 190
>PTZ00207 hypothetical protein; Provisional
Probab=98.88 E-value=1.9e-07 Score=99.99 Aligned_cols=166 Identities=11% Similarity=-0.047 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHHhCCCcch-HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccC
Q psy10231 386 GMYIVLYYAVNFFEDAGSSLDD-YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSM 464 (607)
Q Consensus 386 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (607)
..+.+..+.+.+.++.|.+... ...... +.......++.|++.||+|+|+++.++.++..++.++.++.....
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~----- 115 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV----- 115 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 3567778888887777876543 333222 222334566789999999999999999999999988777631100
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHH
Q psy10231 465 DDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFS 544 (607)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~ 544 (607)
-..+.+...+...+.+.+. ....+.....+.+.|| +.||.+.|+......+|+.+.+.+...+.. .++...+++.+
T Consensus 116 -i~~s~~~l~l~r~l~G~G~-~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~ 191 (591)
T PTZ00207 116 -IEGSVVRLSVYNGLMTLGC-MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLM 191 (591)
T ss_pred -ccCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 0012222222222222222 2223334466778887 679999999999999999876655555544 35666777888
Q ss_pred HHHHHHHHHhhhcccCC
Q psy10231 545 CACLLAMVFIQAFLPET 561 (607)
Q Consensus 545 ~~~~~~~~~~~~~~~~~ 561 (607)
.+.++.+++...++++.
T Consensus 192 vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 192 SFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHhheeCC
Confidence 87777777666665543
No 191
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.87 E-value=4.7e-08 Score=103.96 Aligned_cols=155 Identities=15% Similarity=0.041 Sum_probs=106.9
Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCCh
Q psy10231 392 YYAVNFFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNW 471 (607)
Q Consensus 392 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (607)
.-.+.+.++.|.+.+..+......+...++.++.|+++|.+|||..++.+.++..++.++.+.. .+..
T Consensus 65 ~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA------------~~~~ 132 (599)
T PF06609_consen 65 SILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA------------QNMN 132 (599)
T ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC------------CcHH
Confidence 3345566677776667777777888899999999999999999999999999999999887652 1222
Q ss_pred HHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHH
Q psy10231 472 IPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAM 551 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 551 (607)
..+....+.+.+ .+........++|..|.+.|..+.++.....-.....++.+...+..+.+|++.|++.+....++.
T Consensus 133 ~~iag~~l~Gvg--aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 133 TFIAGMVLYGVG--AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 223333333332 333344456689999999998887766654444444556665555556789999998888777766
Q ss_pred HHhhh-cccC
Q psy10231 552 VFIQA-FLPE 560 (607)
Q Consensus 552 ~~~~~-~~~~ 560 (607)
+...+ +.|.
T Consensus 211 vl~~~fY~PP 220 (599)
T PF06609_consen 211 VLIFFFYFPP 220 (599)
T ss_pred HHHHHHhCCC
Confidence 55443 4443
No 192
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.87 E-value=7.1e-08 Score=95.92 Aligned_cols=166 Identities=14% Similarity=0.048 Sum_probs=122.3
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhcc
Q psy10231 383 EASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSE 461 (607)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 461 (607)
.++..+.+....+.+-++.+++.+ ..+...+..+.+.+.++..|.+.||+|.|++...+.++..+-.+.+++....
T Consensus 26 ~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~--- 102 (417)
T COG2223 26 GFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY--- 102 (417)
T ss_pred HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC---
Confidence 333334444444444455666544 4667777888899999999999999999999999999888888777764221
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh---hHH
Q psy10231 462 LSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN---MGG 538 (607)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g---~~~ 538 (607)
...+..+.+... .+.+.+.......++++.||++.+|.+.|+.. .+|+|..+...+.+.+....+ |+.
T Consensus 103 ------~~~~~ll~~gll--~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~ 173 (417)
T COG2223 103 ------PSTWQLLVIGLL--LGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRN 173 (417)
T ss_pred ------CchHHHHHHHHH--HhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHH
Confidence 222333332222 22333445666688999999999999999999 999999999999999999998 888
Q ss_pred HHHHHHHHHHHHHHHhhhcccC
Q psy10231 539 MMWAFSCACLLAMVFIQAFLPE 560 (607)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~ 560 (607)
...++....++..+..++...+
T Consensus 174 ~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 174 VAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 8888888888877777776544
No 193
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.86 E-value=1.2e-08 Score=108.94 Aligned_cols=143 Identities=8% Similarity=-0.125 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
+.....+.++..++.++.|++.||+|||+.+..+.++..++.++..+.. ......++..-++.+.....
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA-----------GGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH-----------HcCchHHHHHHHHHHHhccc
Confidence 5566777788999999999999999999999888877766665543311 11112222222333333444
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh-hhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL-LNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
..+....++.|.+|++.|+++.|+.+....+|..+++.+.+.+.+. .+|+..|++.++..++..++.+.+.+|.
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 5566778999999999999999999999999999999999999888 4999999988887777666655554443
No 194
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.84 E-value=1.6e-07 Score=97.83 Aligned_cols=149 Identities=14% Similarity=-0.004 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.......|.+.++.+.+.+ .+.......++..++.++.|++.||+|||+++..+..+.+++.+..++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a----------- 94 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY----------- 94 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-----------
Confidence 4456667888777787554 4677777888889999999999999999999999999999999888762
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh-hhHHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL-NMGGMMWAFSC 545 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~-g~~~~~~~~~~ 545 (607)
++.+..+..-.+.+.+.+ ...+....++.+.+| +.|+.++|+.......|..+++.+.+.+.++. +|+..+..++.
T Consensus 95 -~~~~~ll~~r~l~Gig~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~ 171 (393)
T PRK09705 95 -PQSALLLSSALLGGVGIG-IIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWAL 171 (393)
T ss_pred -cchHHHHHHHHHHHhHHH-HHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 122222222222223322 333445577888887 67999999999999999999999998888775 78877666555
Q ss_pred HHHHH
Q psy10231 546 ACLLA 550 (607)
Q Consensus 546 ~~~~~ 550 (607)
..++.
T Consensus 172 ~~~~~ 176 (393)
T PRK09705 172 PAVVA 176 (393)
T ss_pred HHHHH
Confidence 54433
No 195
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.84 E-value=2.2e-07 Score=98.06 Aligned_cols=178 Identities=10% Similarity=-0.112 Sum_probs=104.9
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhC---CCcc-h---HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 378 FFLFQEASGMYIVLYYAVNFFEDAG---SSLD-D---YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~-~---~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
+..+........+....|.+.++.+ .+.. . ........++..++.++.|++.||+|||+.+..+.....++.+
T Consensus 29 ~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3333444444555555666655543 2211 1 1223333455568999999999999999999999998888887
Q ss_pred HHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHH
Q psy10231 451 ISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDL 530 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l 530 (607)
..++....... .......+...-...+....+..+...+++.|.+|++.|+.+.++.......|..+++.+...+
T Consensus 109 ~~~~~~~~~~~-----~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 183 (432)
T PRK10406 109 VIACLPGYETI-----GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL 183 (432)
T ss_pred HHhhcCCchhH-----HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76652100000 0000011222222222222334566778999999999999999988777767766666554433
Q ss_pred H--------HhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 531 M--------YLLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 531 ~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
. ...||+.+|++.++..++... .....||+
T Consensus 184 ~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~ 221 (432)
T PRK10406 184 QQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDET 221 (432)
T ss_pred HHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCC
Confidence 2 256899899876666655432 23344554
No 196
>KOG2615|consensus
Probab=98.84 E-value=1.4e-08 Score=98.94 Aligned_cols=163 Identities=15% Similarity=0.075 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHh-CCCc-----chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhc
Q psy10231 387 MYIVLYYAVNFFEDA-GSSL-----DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFS 460 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~-g~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 460 (607)
.+.+.++...-++.. +.+. -++.....+++..++.++..|.++||+|||+++..+.+..++...+.+.
T Consensus 44 L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~------ 117 (451)
T KOG2615|consen 44 LYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL------ 117 (451)
T ss_pred hhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------
Confidence 455555555555543 3322 2466788889999999999999999999999999999988888877766
Q ss_pred cccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH---hhhhH
Q psy10231 461 ELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY---LLNMG 537 (607)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~---~~g~~ 537 (607)
..+...++.. =+..+..-+...+.-++++|+++++.|+.+++.++....+|.++||.+.|++.. ..|.+
T Consensus 118 -------S~~F~afv~a-R~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~ 189 (451)
T KOG2615|consen 118 -------SRNFAAFVLA-RFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSY 189 (451)
T ss_pred -------HHHHHHHHHH-HHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccC
Confidence 2222222221 122233334455666999999999999999999999999999999999999887 33322
Q ss_pred HHH---HHHHHHHHHHHHHhhhcccCCCC
Q psy10231 538 GMM---WAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 538 ~~~---~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
..+ ++..+.+.....+..+++|||-.
T Consensus 190 p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 190 PFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 211 22222222223344567899843
No 197
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.83 E-value=1.4e-08 Score=108.09 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=132.2
Q ss_pred ccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccch
Q psy10231 36 NNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGF 115 (607)
Q Consensus 36 ~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~ 115 (607)
+++..+....++|.+.+ +++|.++...|++.+++.+|..+|+++.+++.+|+++++.+..+.++++++.+..+++++.
T Consensus 230 ~~l~~~a~~aLlPl~a~--~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 230 FNLFASAVWALLPLFAR--DVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred HHHhhhHHHHhhhHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHH
Confidence 34433334456777765 2689999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHH
Q psy10231 116 TLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 116 ~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~ 190 (607)
+..++.-++.|++.....+ ..+.+.+..|++.|||+++++......+..+|..+.+.+ |-+..+.+.++..++..
T Consensus 308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 899999999999999999999888888888887777776 77888877776555544
Q ss_pred HH
Q psy10231 191 AA 192 (607)
Q Consensus 191 ~~ 192 (607)
++
T Consensus 388 ~~ 389 (524)
T PF05977_consen 388 LI 389 (524)
T ss_pred HH
Confidence 43
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=98.83 E-value=2.5e-08 Score=107.70 Aligned_cols=135 Identities=16% Similarity=0.102 Sum_probs=113.2
Q ss_pred HHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccch--hHHHHHHHHHhhhhhhHhh-hHhHHhhc
Q psy10231 66 WIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGF--TLLCVGRFITGMAIGMSSA-CYVYVAEI 142 (607)
Q Consensus 66 ~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~--~~l~~~R~l~G~g~g~~~~-~~~~i~e~ 142 (607)
+......+....+.++.+++.||+|||+++.++.++.+++.++..+.++. +..++.-++.+++.+...+ ...+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566777889999999999999999999999999988888887654 5556667788888888888 99999999
Q ss_pred cCCCccccccchhhHHHHHHHHHHHHHhhhh--hHHHHHHHhHHHHHHHHHHHhcCCCCh
Q psy10231 143 CLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV--TWQYTSAACAVVALVGFAAMHAVPETP 200 (607)
Q Consensus 143 ~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l--~Wr~~f~~~~~~~~~~~~~~~~~pes~ 200 (607)
+|++.|+.++++......+|.+++|.+.+.. ++...+++.+...++..+..+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999999998832 667788888888877777778889875
No 199
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=1.5e-07 Score=99.48 Aligned_cols=168 Identities=14% Similarity=-0.037 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcch--HHHHHH-----HHHHHHHHHHHHhHhhcccCCchhHHHhhHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDD--YVASII-----VAGLRFFMAIIGSACIQMFSRRALATTSAFF 444 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-----~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~ 444 (607)
......+..+........+....|.+.++.+.+... ...... ..+...++.++.|++.||+|||+.+..+..+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 455555666666666777888889888887764432 222111 1222346788999999999999999999988
Q ss_pred HHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHh
Q psy10231 445 MALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTV 524 (607)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~ 524 (607)
..++.++.++....... ........++.-++.+.+ .....+....++.|.+|++.|+.+.++.....+++..+++
T Consensus 96 ~~~~~~l~~~~~~~~~~----~~~~~~~l~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 96 MASGTLLIAFVPGYATI----GLAAPLLVLLGRLLQGFS-AGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHhCCcHHHH----HHHHHHHHHHHHHHhhcc-ccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 88888777652100000 000000111111121221 1222344557899999999999999999888888777776
Q ss_pred hhcHHH--------HHhhhhHHHHHHHH
Q psy10231 525 KMYPDL--------MYLLNMGGMMWAFS 544 (607)
Q Consensus 525 ~i~~~l--------~~~~g~~~~~~~~~ 544 (607)
.+.+.+ .+..||+.+|++..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 665554 34678888887643
No 200
>KOG3098|consensus
Probab=98.82 E-value=3.7e-06 Score=86.51 Aligned_cols=102 Identities=12% Similarity=-0.035 Sum_probs=88.0
Q ss_pred HHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCC
Q psy10231 68 ASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPN 146 (607)
Q Consensus 68 ~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~ 146 (607)
.++.+....+++++.+.+.|+.|.|..+.++...+....+..-+ +|-+-++++-.+.|+|.+..+. --.|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67788888899999999999999999999999999887766644 5677888999999999999999 999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHh
Q psy10231 147 DRGYLSAFGPVFVSLGVLIVYSLG 170 (607)
Q Consensus 147 ~r~~~~~~~~~~~~lG~~ig~~l~ 170 (607)
.+.+..++.-.....+.++|+.+-
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhh
Confidence 999998888777777777765443
No 201
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.82 E-value=3.7e-07 Score=95.72 Aligned_cols=176 Identities=9% Similarity=-0.048 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhc----ccCCchhHHHh-hHHHHHHHHHHhhhhhhhc
Q psy10231 387 MYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQ----MFSRRALATTS-AFFMALSMGISGTYEYYFS 460 (607)
Q Consensus 387 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d----~~grr~~l~~~-~~~~~~~~~~~~~~~~~~~ 460 (607)
+.....+.+.++++.|.+.. ......+..+.+++..++.|+++| |+|||+.++.. .....+++.++++......
T Consensus 20 ~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~ 99 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGH 99 (477)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhh
Confidence 45666777778888888554 456677778899999999999999 59999988764 4555555555544211100
Q ss_pred cccC--CCCCCCh---HHHHHHHHHHHHHHhccchhhhhhhccccCccch--hhHHHHHHHHHHHHHHHHhhhcHHH--H
Q psy10231 461 ELSM--DDRPLNW---IPLACILANVCASMLGMLQLPWVMIAELFPLSVR--GIMGGIVCSLGYLFIFTTVKMYPDL--M 531 (607)
Q Consensus 461 ~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~g~~~~~~~~~~~i~~~i~~~l--~ 531 (607)
.... ......+ ..+....+......... +..-++++|..|+++| +.+.++.+...++|+.+++.+.+.. .
T Consensus 100 ~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~-~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~ 178 (477)
T TIGR01301 100 LFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQ-GPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLY 178 (477)
T ss_pred hccccccccchhHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 0000 0001111 11222222222222222 3334899999998876 5789999999999999998887754 2
Q ss_pred Hhh-------------hhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 532 YLL-------------NMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 532 ~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
+.. +.+..|++-+++.+++.++..+..+|..-
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 179 KIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 211 45667888888888888888888888653
No 202
>KOG0569|consensus
Probab=98.81 E-value=2.2e-07 Score=96.36 Aligned_cols=144 Identities=17% Similarity=0.098 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhcc
Q psy10231 409 VASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGM 488 (607)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (607)
....++.+++++|++..+.+.||+|||..+..+.++..++.++..+.... ......+..=++.+...+...
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~---------~~~e~li~GR~i~Gl~~gl~~ 134 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA---------PSFEMLILGRLIVGLACGLST 134 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHHHhHHHH
Confidence 35666778999999999999999999999998888888877776664332 222233333333333333333
Q ss_pred chhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc-HHHHHh-hhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 489 LQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY-PDLMYL-LNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 489 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~-~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
.....+..|..|++.||....+......+|..++..+. +.+... ..|...+....+.+++..+ ...++||+.+
T Consensus 135 -~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk 209 (485)
T KOG0569|consen 135 -GLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPK 209 (485)
T ss_pred -HHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcc
Confidence 23337899999999999999999999888888884433 344433 2355444444444444444 4556799854
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.81 E-value=1.8e-07 Score=95.98 Aligned_cols=163 Identities=10% Similarity=-0.113 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhccc-----CCchhH-HHhhHHHHHHHHHHhhhhhhhccc
Q psy10231 389 IVLYYAVNFFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMF-----SRRALA-TTSAFFMALSMGISGTYEYYFSEL 462 (607)
Q Consensus 389 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 462 (607)
....-.|.+.++.|.+.+.........+...+ .++.|.++||+ |||+.+ +.+.+..++....+++..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~------ 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV------ 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC------
Confidence 34455677788878765532222222333333 88999999997 888864 555556655555554321
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh-------
Q psy10231 463 SMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN------- 535 (607)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g------- 535 (607)
+....+.......+ .........+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..+
T Consensus 79 ---~~~~l~~l~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 79 ---PSTDLPLLAGLAFL-IAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred ---cchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 00111222222222 2233333345556889999999999999999999999999999999998888888
Q ss_pred -hHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 536 -MGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 536 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
|+..|++.++..++..+..++..||.+
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 998998888877776655554556653
No 204
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.80 E-value=2.3e-08 Score=103.74 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=113.5
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+++++.+.+++..++.|++.+...+
T Consensus 234 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 313 (382)
T PRK11128 234 AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLA 313 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred hHhHHhhccCCCccccccchhh-HHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGP-VFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
...++.+. +++++++..+... ...++|..+|+.+++.+ ++ ..|+..++++++.++
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 314 AMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 88888886 5666788888775 55677878888888877 55 456666666655443
No 205
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.80 E-value=2.5e-07 Score=96.66 Aligned_cols=157 Identities=13% Similarity=-0.012 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.......|.+.++.+.+.. .+.......++..++++..+++.||+|||+.+..+..+.+++.++......
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~--------- 90 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE--------- 90 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 3444666777677777553 567778888999999999999999999999999999888888766533110
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH--------------
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY-------------- 532 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~-------------- 532 (607)
..+.+..+...++.+.+.+. ..+..+.++.+..|++.|++..++.+.+..+|..+++.+.+.+..
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~ 169 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGF-LETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKL 169 (410)
T ss_pred hccHHHHHHHHHHHHhhHHH-HHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhc
Confidence 01222233333333333322 233444677788899999999999999999999999998887742
Q ss_pred ------------hhhhHHHHHHHHHHHHHHHHHh
Q psy10231 533 ------------LLNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 533 ------------~~g~~~~~~~~~~~~~~~~~~~ 554 (607)
..+|+.+|.+.+.+.++..++.
T Consensus 170 ~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 170 SPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2458888888887766655443
No 206
>KOG3764|consensus
Probab=98.79 E-value=2.7e-08 Score=97.56 Aligned_cols=147 Identities=14% Similarity=0.009 Sum_probs=121.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHH
Q psy10231 406 DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASM 485 (607)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (607)
..++......+.+++.+++.|.+.||+|+|..++.|.+++..+.+++++ ...+..++..=...+...
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf-------------g~sy~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF-------------GNSYPMLFVARSLQGVGS 173 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH-------------cchhHHHHHHHHHhhhhH
Confidence 3567788888999999999999999999999999999999999999887 233334444444444444
Q ss_pred hccchhhhhhhccccCccc-hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q psy10231 486 LGMLQLPWVMIAELFPLSV-RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGK 564 (607)
Q Consensus 486 ~~~~~~~~~~~~e~~p~~~-r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (607)
........+++++.||.+. |++++|+.-.+..+|..++|++.|.+.+..|...+|.+++.++++...+.++.++.++.+
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 4444556689999999876 699999999999999999999999999999999999999999999998888777766554
Q ss_pred C
Q psy10231 565 T 565 (607)
Q Consensus 565 ~ 565 (607)
+
T Consensus 254 ~ 254 (464)
T KOG3764|consen 254 P 254 (464)
T ss_pred c
Confidence 4
No 207
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.78 E-value=3.7e-07 Score=95.37 Aligned_cols=169 Identities=11% Similarity=0.045 Sum_probs=115.5
Q ss_pred HhhhhhHHHHHHHHHHHHHHhCCCcch-HHHHHHHHHHHHHHHHHHhHhhccc-----CCch-hHHHhhHHHHHHHHHHh
Q psy10231 381 FQEASGMYIVLYYAVNFFEDAGSSLDD-YVASIIVAGLRFFMAIIGSACIQMF-----SRRA-LATTSAFFMALSMGISG 453 (607)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~-----grr~-~l~~~~~~~~~~~~~~~ 453 (607)
+.+.........-.|.++++.|.+.+. +.... .... .+..++.|+++||+ |||+ .+..+....+++...+.
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~-~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~ 86 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSL-VGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA 86 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 344555667778889999988886654 33322 2222 57889999999999 7765 67777777766666554
Q ss_pred hhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 454 TYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
+.. .....+.......+. ..+.....+...+++.|.+|+++|+.+.++......++..+++.+.+.+.+.
T Consensus 87 ~~~---------~~~~~~~l~~~~~~~-~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 87 FCP---------PHAALWPLAGLAVLV-AFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred hcC---------ccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 421 111222222222222 3333444566678999999999999999999998899999999988888885
Q ss_pred -hhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 534 -LNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 534 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
.||+..|++.+.+.++..+. .+..||++
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 48999998888877665544 34556654
No 208
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.78 E-value=3e-08 Score=103.41 Aligned_cols=134 Identities=7% Similarity=0.106 Sum_probs=115.6
Q ss_pred ccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hH
Q psy10231 58 SISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CY 136 (607)
Q Consensus 58 ~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~ 136 (607)
+.+....|++.+...+...++.+..|++.||+|||+.+.++.++.+++..+.+.++|.+.+++.+++.|++.+.... ..
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556788999999999999999999999999999999999999888888878889999999999999999888777 77
Q ss_pred hHHhhccCCCccccccch-hhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 137 VYVAEICLPNDRGYLSAF-GPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 137 ~~i~e~~~~~~r~~~~~~-~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.++.+..+++.++...+. .+....+|..+++.+++++ ||+..|.+.++..++..+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 888888888888887766 6778899999999888877 899999998888766544
No 209
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.76 E-value=9.1e-08 Score=100.80 Aligned_cols=152 Identities=15% Similarity=0.101 Sum_probs=133.9
Q ss_pred cccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCc--hhhhhhhhHHHHHHHHHHh--------ccc
Q psy10231 45 ILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRK--TTVQLTAIPFIIGWTIITV--------SKG 114 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr--~~l~~~~~l~~~~~~~~a~--------a~~ 114 (607)
.......+ +++.+..+...+.-...+...+|++++|++.||+|.| ++++++++++.+..+...+ .++
T Consensus 303 ~~~i~a~~---~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~ 379 (477)
T PF11700_consen 303 FAGIYATE---VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKS 379 (477)
T ss_pred HHHHHHHH---hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCccc
Confidence 33344445 8999999999999999999999999999999999999 8999999888776666666 678
Q ss_pred hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHH
Q psy10231 115 FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALV 188 (607)
Q Consensus 115 ~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~ 188 (607)
-+.+.+.-++.|+..|..++ +.++.+|+.|+++.+..+|++.+..-....+||.+-+.+ +-|+.+....++.++
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~ 459 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLI 459 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 89999999999999999999 999999999999999999999999999999999988888 588888888888888
Q ss_pred HHHHHhcCCCC
Q psy10231 189 GFAAMHAVPET 199 (607)
Q Consensus 189 ~~~~~~~~pes 199 (607)
.+++++++++.
T Consensus 460 gl~ll~~v~~~ 470 (477)
T PF11700_consen 460 GLILLFFVDVE 470 (477)
T ss_pred HHHHHhhccch
Confidence 88777777654
No 210
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.75 E-value=2.4e-07 Score=88.06 Aligned_cols=152 Identities=20% Similarity=0.260 Sum_probs=122.9
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc-------cchh
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-------KGFT 116 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-------~~~~ 116 (607)
+..-|++++ .+|.|++|...+.++-.+|..+| ++.|.+.|++|+|.++.+|.+...+|..+..++ .++|
T Consensus 22 s~yS~~Lk~---~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 22 SAYSPQLKS---RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred hhhhHHHHH---HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 466788998 99999999999999999999874 899999999999999999999999988877654 4678
Q ss_pred HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.+.+..++.|.+.+.... +.....+.+| ++||.+.++.-...+++..+-..+...+ .-+..+.....+.++.++
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~ 176 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLV 176 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 888889999999888777 7777788887 5899999999999999998877776666 344555555555555555
Q ss_pred HHhcCCCCh
Q psy10231 192 AMHAVPETP 200 (607)
Q Consensus 192 ~~~~~pes~ 200 (607)
..+++.+-|
T Consensus 177 ~~~~vr~~~ 185 (250)
T PF06813_consen 177 AMFFVRPVP 185 (250)
T ss_pred HhhheeccC
Confidence 555554333
No 211
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.74 E-value=1.1e-07 Score=94.59 Aligned_cols=144 Identities=15% Similarity=0.185 Sum_probs=131.9
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
++|+++.+..++.-...+..+.|++++|++.||+|-|+++..++++..+.++..-+...-..+.++-.+.|...|+.+.
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~ 361 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQAS 361 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHH
Confidence 8999999999999999999999999999999999999999999999999999888888888888889999999999999
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHHHhcCCCC
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAAMHAVPET 199 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~~~~~pes 199 (607)
+.+|..+..|+++-++.++++....-.++.+||.+-+.+ +-|.-+....++-.+.++.++++|+.
T Consensus 362 SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 362 SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999888877 67887777777777777777777765
No 212
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.72 E-value=3.9e-07 Score=108.34 Aligned_cols=144 Identities=9% Similarity=-0.047 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
.+......+..++.++++|+++||+|||+++........+........... ...+. ++...+..+.+...
T Consensus 55 ~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~---------~s~~~-l~~~~~l~gi~~a~ 124 (1140)
T PRK06814 55 TLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL---------NSVPL-LFAALFLMGIHSAL 124 (1140)
T ss_pred HHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH---------hhHHH-HHHHHHHHHHHHHh
Confidence 445556677788899999999999999987543222221111111111000 12223 33333333434444
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
..|...+++.+.+|++.|+.++|+.++...++..++|.+.|.+.+..+|...|+..+.+.+ ..++..+.+|+++
T Consensus 125 ~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (1140)
T PRK06814 125 FGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV-LGWLASLFIPKTG 198 (1140)
T ss_pred hchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHHHHHhhCCCCC
Confidence 5678889999999999999999999999999999999999999999898877733333333 3344445556543
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.72 E-value=1.2e-06 Score=92.43 Aligned_cols=138 Identities=12% Similarity=-0.059 Sum_probs=95.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccc
Q psy10231 384 ASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSEL 462 (607)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 462 (607)
.........+.|.+-++.+.+.. .+.....+.++..++.++.|++.||+|||+.+..+..+..++.+++.....
T Consensus 39 ~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~----- 113 (438)
T PRK10133 39 AVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE----- 113 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 33456667778888667777544 567778888999999999999999999999999999988888866432110
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHH
Q psy10231 463 SMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLM 531 (607)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~ 531 (607)
.+..+..+....+.+.+.+. ..+..+.++.|..|++.|....++.+....+|..+++.+.+.+.
T Consensus 114 ----a~~~~~ll~~r~l~G~g~g~-~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 114 ----IMNYTLFLVGLFIIAAGLGC-LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred ----cCCHHHHHHHHHHHHHHHHH-HHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01222333333333333333 33444566778777776667889999999999999988766543
No 214
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.71 E-value=9.9e-07 Score=94.47 Aligned_cols=168 Identities=12% Similarity=0.089 Sum_probs=110.9
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhHhhccc-----CCchh-HHHhhHHHHHHHHHHhhhh
Q psy10231 383 EASGMYIVLYYAVNFFEDAGSSLDDYVASIIVAGLRFFMAIIGSACIQMF-----SRRAL-ATTSAFFMALSMGISGTYE 456 (607)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----grr~~-l~~~~~~~~~~~~~~~~~~ 456 (607)
+...........|.++++.|.+.+........+.. .++.++.+.++||+ |||+. +..+.+..+++...+++..
T Consensus 24 ~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~ 102 (491)
T PRK11010 24 SGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE 102 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Confidence 34445566667788887777654432222222222 26789999999999 98875 5566666666655554421
Q ss_pred hhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH-hhh
Q psy10231 457 YYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY-LLN 535 (607)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~-~~g 535 (607)
+....+.......+ ...+.....+...++..|.+|+++|+.+.++......+|..+++.+.+.+.+ ..|
T Consensus 103 ---------~~~~l~~l~~~~~l-~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 103 ---------PGTQLRWLAALAVV-IAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred ---------CcchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 11122222222222 2223334445566889999999999999999999999999999999988888 469
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy10231 536 MGGMMWAFSCACLLAMVFIQAFLPETQ 562 (607)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (607)
|+..|++.+.+.++..+..+ ..||+.
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~-~~~e~~ 198 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATL-LAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCCc
Confidence 99999998887776655544 357653
No 215
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.68 E-value=1e-07 Score=99.14 Aligned_cols=136 Identities=13% Similarity=0.011 Sum_probs=106.6
Q ss_pred ccccCccchhHHHHHHH-HHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh------ccchhHHHHHHHHHhhh
Q psy10231 56 IISISSDDASWIASLGV-ISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV------SKGFTLLCVGRFITGMA 128 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~-l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~------a~~~~~l~~~R~l~G~g 128 (607)
|.|.++++.|++..... .+..++.++.|++.||+|+|+.+..+.++.++..+.... .++...+....++.+++
T Consensus 237 ~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 237 DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 67999999999988876 466778899999999999999998877665333332221 23344555566677777
Q ss_pred hhhHhh-hHhHHhhccCC-CccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 129 IGMSSA-CYVYVAEICLP-NDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 129 ~g~~~~-~~~~i~e~~~~-~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.+...+ ..+.+.+..++ +++++..++.+...++|..+||.+++.+ ||+..|+..+++.++..+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 888888 78887788776 8899999999999999999999999877 888999888877766544
No 216
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.67 E-value=1.2e-07 Score=100.25 Aligned_cols=114 Identities=16% Similarity=0.274 Sum_probs=98.8
Q ss_pred CccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc-cchhHHHHHHHHHhhhhhhHhh-hHh
Q psy10231 60 SSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-KGFTLLCVGRFITGMAIGMSSA-CYV 137 (607)
Q Consensus 60 s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-~~~~~l~~~R~l~G~g~g~~~~-~~~ 137 (607)
++.+.+++.+...++..++.+++++++||+|||+++..+.++..++.++..+. ++.+.+++..++.|++.+...+ ..+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999998888887777665 4667778888999999999999 999
Q ss_pred HHhhccC-------CCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 138 YVAEICL-------PNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 138 ~i~e~~~-------~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
+++|..+ ++++|...++.+....+|..+++.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 45679999999999999999999888776
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.66 E-value=7.7e-08 Score=114.66 Aligned_cols=144 Identities=16% Similarity=0.236 Sum_probs=122.1
Q ss_pred ccccCcc-chhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh
Q psy10231 56 IISISSD-DASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA 134 (607)
Q Consensus 56 ~~~~s~~-~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~ 134 (607)
.++.+.. +.+++.+...++..+++++.|+++||+++|+++.++.++.+++.++.++..+.+.++++-++.|++.+...+
T Consensus 262 ~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (1146)
T PRK08633 262 VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIV 341 (1146)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 6788888 999999999999999999999999999999999999999988888888888999999999999999999999
Q ss_pred -hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHHHH-HhcCCCC
Q psy10231 135 -CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGFAA-MHAVPET 199 (607)
Q Consensus 135 -~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~~~-~~~~pes 199 (607)
..+++.+..|+++||+++++.+....+|.++++.++..+ ++...|++.+.+.++..+. ...+|++
T Consensus 342 ~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (1146)
T PRK08633 342 PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLLLPDS 413 (1146)
T ss_pred HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999999998887777665 4555666655554443332 2445555
No 218
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.65 E-value=2.6e-07 Score=101.43 Aligned_cols=190 Identities=12% Similarity=-0.014 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHH
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMG 450 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~ 450 (607)
+++.+.+..+.+.........-.+.+-++.+++. +.+.+...+.++..++.++.+++.||.+||+++..+.++.+++.+
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 3344443444443333334444455545566644 356677788889999999999999999999999999999999988
Q ss_pred HHhhhhhhhccccCC------------------------------------CC--CCChHHHHHHHHHHHHHHhccchhh
Q psy10231 451 ISGTYEYYFSELSMD------------------------------------DR--PLNWIPLACILANVCASMLGMLQLP 492 (607)
Q Consensus 451 ~~~~~~~~~~~~~~~------------------------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (607)
+.++.-+........ .. ...+..++..-++.+.+.....+..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 876632111000000 00 0122233333333333334445667
Q ss_pred hhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh----------------------hhHHHHHHHHHHHHHH
Q psy10231 493 WVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL----------------------NMGGMMWAFSCACLLA 550 (607)
Q Consensus 493 ~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~----------------------g~~~~~~~~~~~~~~~ 550 (607)
.+++.|.+|++.|+.+.|+.+....+|..+++.+.+.+.+.. +|+..|++.+.+.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999998877542 2555677777777666
Q ss_pred HHHhhhcccCCC
Q psy10231 551 MVFIQAFLPETQ 562 (607)
Q Consensus 551 ~~~~~~~~~~~~ 562 (607)
++.. +++|++.
T Consensus 274 ~v~l-~~~p~~l 284 (633)
T TIGR00805 274 SIPF-FFFPKAL 284 (633)
T ss_pred HHHH-HhCcccc
Confidence 5543 4456543
No 219
>KOG0637|consensus
Probab=98.63 E-value=6.6e-08 Score=96.68 Aligned_cols=148 Identities=14% Similarity=0.168 Sum_probs=107.3
Q ss_pred hHHHhhhcccccccc--ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh----hhcCchhhhh-hhhH
Q psy10231 29 WIGKLHCNNLTHAIP--SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD----LLGRKTTVQL-TAIP 101 (607)
Q Consensus 29 ~~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D----r~Grr~~l~~-~~~l 101 (607)
...+....|..+++. ...+|.... +++++....+.+--.-.+...+.+++.|..+| ||||||.++. +.++
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~---~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQ---SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHH---HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 334444556555543 233333333 57788888888888888888899999999999 6999887766 5556
Q ss_pred HHHHHHHHHhccchh-----------------HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCcccc-ccchhhHHHHHH
Q psy10231 102 FIIGWTIITVSKGFT-----------------LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGY-LSAFGPVFVSLG 162 (607)
Q Consensus 102 ~~~~~~~~a~a~~~~-----------------~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~-~~~~~~~~~~lG 162 (607)
..++.++..++.++. .++++--+.=++...... +-+++.|...++++.+ +.+.+....++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 667777777775532 344444455556667777 9999999998776666 999999999999
Q ss_pred HHHHHHHhhhhhHHHHH
Q psy10231 163 VLIVYSLGYIVTWQYTS 179 (607)
Q Consensus 163 ~~ig~~l~~~l~Wr~~f 179 (607)
..+|..++.+.+|+-.|
T Consensus 192 nvLGY~~g~y~~~~~~~ 208 (498)
T KOG0637|consen 192 NVLGYALGSYLGLYKIF 208 (498)
T ss_pred ceeeeecccccCceEEe
Confidence 99999999888665543
No 220
>KOG0255|consensus
Probab=98.60 E-value=9.1e-07 Score=95.86 Aligned_cols=140 Identities=11% Similarity=0.048 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHh
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASML 486 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (607)
......++.++.++|.++.|.++||+|||++++.+.++..++.+..++ ..++..+...=.+.+.+..
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-------------a~~~~~~~~~Rfl~G~~~~ 186 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-------------APNYWMFLIFRFLSGFFGS 186 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-------------hCcHHHHHHHHHHHHhhcc
Confidence 455677788889999999999999999999999999999888877766 4555666666666666667
Q ss_pred ccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 487 GMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 487 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
+.....+.+..|.++++.|+.+..+ ....+.++.+++...+++.. +|++.+++.....++..++ +++.||.++
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChH
Confidence 7777788999999999999999999 88888999999988888887 7888888877777766655 555557643
No 221
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.59 E-value=2.3e-06 Score=87.73 Aligned_cols=157 Identities=9% Similarity=-0.053 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhCCCcc--hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC
Q psy10231 391 LYYAVNFFEDAGSSLD--DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP 468 (607)
Q Consensus 391 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (607)
.+-.|.+.++.|++.. .+.+...+..+..+..+.+|++.||+|.|+++..+.+.-.+..++.++. .
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------------~ 113 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------------T 113 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------------H
Confidence 3344555567787554 3567777888899999999999999999999999988888888777762 1
Q ss_pred CChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHH--HHHHH
Q psy10231 469 LNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMW--AFSCA 546 (607)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~--~~~~~ 546 (607)
......+.=++++.+-+.. . ....++...+|++.|+++.|+.+....+|.++++++.+. ....||..... .+...
T Consensus 114 Sl~~L~i~R~llGvaEA~~-~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAAR-I-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHH
Confidence 1222233333333333333 3 556889999999999999999999999999999999998 55667765332 23333
Q ss_pred HHHHHHHhhhcccCCC
Q psy10231 547 CLLAMVFIQAFLPETQ 562 (607)
Q Consensus 547 ~~~~~~~~~~~~~~~~ 562 (607)
+.+.+++..+++|..+
T Consensus 191 s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 191 FMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHHhCCCCc
Confidence 3334444456667443
No 222
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.58 E-value=2.9e-07 Score=91.66 Aligned_cols=149 Identities=21% Similarity=0.301 Sum_probs=121.2
Q ss_pred ccccccccccccccCCCcccccCc--cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccc-
Q psy10231 38 LTHAIPSILIPQLQKPSSIISISS--DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKG- 114 (607)
Q Consensus 38 ~~~~~~~~~~p~l~~~~~~~~~s~--~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~- 114 (607)
++........+.+.. +++.+. .+.+++.+.+.++..++.++.|.++||+|||+.+..+.....++.+++++..+
T Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 16 LDLGLLSPALPLLLS---TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred HhcchHHHHHHHHHH---HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc
Confidence 444444555566655 555555 47899999999999999999999999999998888888776777788888876
Q ss_pred -hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC-CccccccchhhH-HHHHHHHHHHHHhhhh------hHHHHHHHhHH
Q psy10231 115 -FTLLCVGRFITGMAIGMSSA-CYVYVAEICLP-NDRGYLSAFGPV-FVSLGVLIVYSLGYIV------TWQYTSAACAV 184 (607)
Q Consensus 115 -~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~-~~r~~~~~~~~~-~~~lG~~ig~~l~~~l------~Wr~~f~~~~~ 184 (607)
.+.+++.|+++|++.+...+ ..+++.|+.++ ++|+...+.... ...+|..+++.++..+ +||+.|.....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 99999999999999999999 99999999998 778888888888 5888888888776655 69997777666
Q ss_pred HHHHH
Q psy10231 185 VALVG 189 (607)
Q Consensus 185 ~~~~~ 189 (607)
.....
T Consensus 173 ~~~~~ 177 (338)
T COG0477 173 LGLLL 177 (338)
T ss_pred HHHHH
Confidence 65444
No 223
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.56 E-value=1.1e-06 Score=90.25 Aligned_cols=147 Identities=13% Similarity=-0.019 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 388 YIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.......|.+.++.|.+.. .+.......++..++.++.|++.||+|||+.+..+.....++.+.. . .
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~---~-------- 84 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S---A-------- 84 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H---h--------
Confidence 3445567788788787554 5677788889999999999999999999999888877666555433 1 0
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh--hHHHHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN--MGGMMWAFS 544 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g--~~~~~~~~~ 544 (607)
+..+..+....+.+.+.+.. .+....++.|.+| +.|+.+.++.+....+|..+++.+.+.+.+..+ |+..|...+
T Consensus 85 -~~~~~l~~~~~~~g~g~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~ 161 (355)
T TIGR00896 85 -PGTALLFAGTALIGVGIAII-NVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWA 161 (355)
T ss_pred -ccHHHHHHHHHHHHHHHHHH-hccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 12222222222222222222 2333456778876 579999999999999999999999888877653 666666655
Q ss_pred HHHHH
Q psy10231 545 CACLL 549 (607)
Q Consensus 545 ~~~~~ 549 (607)
...++
T Consensus 162 ~~~~~ 166 (355)
T TIGR00896 162 LPALL 166 (355)
T ss_pred HHHHH
Confidence 54433
No 224
>KOG4332|consensus
Probab=98.54 E-value=4e-06 Score=77.84 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=74.5
Q ss_pred ccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhh
Q psy10231 48 PQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGM 127 (607)
Q Consensus 48 p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~ 127 (607)
|.+....+.++....|+|.+.-+.+-...+...+.|.++|+-|||+.-+.-++.+.+++ +.-.+++|-.++++|++.|+
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGI 136 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhH
Confidence 44444444888999999999888888888999999999999999997665555555443 34467899999999999999
Q ss_pred hhhhHhh--hHhHHhhcc
Q psy10231 128 AIGMSSA--CYVYVAEIC 143 (607)
Q Consensus 128 g~g~~~~--~~~~i~e~~ 143 (607)
..+..+. -.-++.|..
T Consensus 137 aTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 9998888 445666755
No 225
>KOG0254|consensus
Probab=98.53 E-value=2.2e-06 Score=92.50 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
.+......++..++.++.|+++|++|||+.++.+.+...++.++.+.. .......+.=++.+.+.+..
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a------------~~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA------------PSWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHhccchhhh
Confidence 578888899999999999999999999999999999999999888773 12223333333333333333
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh--hhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL--NMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
. .+...+.+|..|++.||...+.......+|..++ .+.+....+. +|+..+.+..+.+++..+. .+++||+.+
T Consensus 160 ~-~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 160 S-VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred h-hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 2 3334899999999999999999999888777776 5555555543 7887777777777777766 677787643
No 226
>KOG2504|consensus
Probab=98.52 E-value=9.6e-08 Score=101.27 Aligned_cols=156 Identities=17% Similarity=0.258 Sum_probs=141.2
Q ss_pred cccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhc--CchhhhhhhhHHHHHHHHHHhccchh
Q psy10231 39 THAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLG--RKTTVQLTAIPFIIGWTIITVSKGFT 116 (607)
Q Consensus 39 ~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~G--rr~~l~~~~~l~~~~~~~~a~a~~~~ 116 (607)
.+......+|...+ +.+.++++.+.+.++..+...++.++.|+++|+.. ++.+..++++..+++.+.++++++++
T Consensus 313 g~~~p~~~l~~~~~---~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~ 389 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAK---SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV 389 (509)
T ss_pred HHHHHHHHHHHHHh---hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 33344566677777 88999999999999999999999999999999988 56677788888999999999999999
Q ss_pred HHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHH
Q psy10231 117 LLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 117 ~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~ 190 (607)
.++..-.+.|+..|.... ...++.|..+.++-+.+.|+.....+++.++||.+++.+ +|...|+.+++..++..
T Consensus 390 ~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 390 GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH
Confidence 999999999999999999 888999999999999999999999999999999999988 69999999999998888
Q ss_pred HHHhcCC
Q psy10231 191 AAMHAVP 197 (607)
Q Consensus 191 ~~~~~~p 197 (607)
++++.+|
T Consensus 470 ~~~~~~~ 476 (509)
T KOG2504|consen 470 VLLLILR 476 (509)
T ss_pred HHHHHhH
Confidence 7777776
No 227
>PRK09848 glucuronide transporter; Provisional
Probab=98.47 E-value=1.1e-06 Score=93.41 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=96.3
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc--chhHHHHHHHHHhhhhhhHh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK--GFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~--~~~~l~~~R~l~G~g~g~~~ 133 (607)
.+|.++...++......++..++.++.+++.||+|+|+++.++.++..++.++..+.+ +++.+++..++.|+|.+...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM 337 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 4565555555555555677888999999999999999999999999888887777754 67777788899999999999
Q ss_pred h-hHhHHhhccCCC-------ccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 134 A-CYVYVAEICLPN-------DRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 134 ~-~~~~i~e~~~~~-------~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
+ ..++..|..+.+ ++|...++.+....+|..+|+.+.+.+
T Consensus 338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 999999888754 358889999999999999988877655
No 228
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.42 E-value=2.1e-05 Score=85.92 Aligned_cols=149 Identities=14% Similarity=0.193 Sum_probs=120.1
Q ss_pred cccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhhhHHHHHHHHHHhccc-----
Q psy10231 41 AIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTAIPFIIGWTIITVSKG----- 114 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~~l~~~~~~~~a~a~~----- 114 (607)
++.+.+...+.+ .++.++++...+...+....-+..+++|.++|+ +||++.++++.++..++.++.+++..
T Consensus 5 Gm~aiLvlYl~~---~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 5 GMRTILVLYFLN---FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred ecHHHHHHHHHH---HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 334445555555 678899999999999998889999999999995 69999999999999999988877521
Q ss_pred ---hhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCc---cccccchhhHHHHHHHHHHHHHhhhh-----------hHH
Q psy10231 115 ---FTLLCVGRFITGMAIGMSSA-CYVYVAEICLPND---RGYLSAFGPVFVSLGVLIVYSLGYIV-----------TWQ 176 (607)
Q Consensus 115 ---~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~---r~~~~~~~~~~~~lG~~ig~~l~~~l-----------~Wr 176 (607)
...++++-.+..+|.|++-+ ..+...|.+++++ |-....++..+.++|+++++.+..++ +|.
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 23466778889999999999 9999999997643 56778888889999999988777665 388
Q ss_pred HHHHHhHHHHHHHHHH
Q psy10231 177 YTSAACAVVALVGFAA 192 (607)
Q Consensus 177 ~~f~~~~~~~~~~~~~ 192 (607)
..|.+.++..++.++.
T Consensus 162 ~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 162 LAFGVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888877776653
No 229
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.40 E-value=4.5e-06 Score=79.44 Aligned_cols=141 Identities=15% Similarity=0.102 Sum_probs=94.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCCcch-HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccc
Q psy10231 384 ASGMYIVLYYAVNFFEDAGSSLDD-YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSEL 462 (607)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 462 (607)
....|.+..|.|++-++.|++++. ..+.....++..+ .++.|.+.|++|++..+.++.....++..++........
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i-- 91 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI-- 91 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 345688899999998888987654 3344444455544 588899999999999999999999998877755321110
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhcc-chhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 463 SMDDRPLNWIPLACILANVCASMLGM-LQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
...+.|.. +...+..+.+..+ .+.......+.||. .||++.|+.-....+++.+-..+...+.+.
T Consensus 92 ---~~~~~~~~--~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 92 ---PSLPVWLM--CLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred ---CccchHHH--HHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 11122222 2222222222222 23333555688985 699999999999999999888777666654
No 230
>KOG2532|consensus
Probab=98.38 E-value=5.2e-06 Score=87.09 Aligned_cols=143 Identities=13% Similarity=0.005 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHh
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASML 486 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (607)
.+........+.+++.+.++++.||+|-|+++..+.++.+++.++..+.... ..+ .++..=++.+....
T Consensus 75 k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~----------~~~-~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 75 KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI----------GFY-LLLVLRFLQGLGQG 143 (466)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh----------cch-hhHHHHHHhHHHHh
Confidence 4567777888999999999999999999999999999999888888775322 222 22333333333333
Q ss_pred ccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh-hhhHHHHHHHHHHHHHHHHHhhhcccC
Q psy10231 487 GMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL-LNMGGMMWAFSCACLLAMVFIQAFLPE 560 (607)
Q Consensus 487 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (607)
...|....+.+.-.|+++|++..++.....++|..++-++.|.+.+. .||...|++.+++.++..++-+++..+
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 44577778899999999999999999999999999999999999998 999999999999998887775555443
No 231
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.36 E-value=3.7e-06 Score=84.24 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=101.0
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
.+|.++.+.++..+.+..+..+|.++.+++.||+|+|+++.++.++..++.++....++... ..+-++.|++.+..+|
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999998888888888776666555433 3456689999999999
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----hHHHHHHHhHHH
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----TWQYTSAACAVV 185 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~ 185 (607)
..+...+..+++ .+.+.++. ....+|..++|.+.+.+ |.+..|++..+.
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 899888887754 34555665 45668889999877766 667777644433
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.34 E-value=3.2e-06 Score=87.35 Aligned_cols=144 Identities=19% Similarity=0.298 Sum_probs=115.4
Q ss_pred ccc-cCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc-cchhHHHHH----HHHHhhhh
Q psy10231 56 IIS-ISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-KGFTLLCVG----RFITGMAI 129 (607)
Q Consensus 56 ~~~-~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-~~~~~l~~~----R~l~G~g~ 129 (607)
+.+ .+....+.+.+...++-...-...+++..|+|.|++++++.+.+++=..+.+.. ++.+...+. ..++|+.-
T Consensus 236 ~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 236 ELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred HcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH
Confidence 455 566777888888888888888999999999999999999999999988888887 555444333 45699999
Q ss_pred hhHhh-hHhHHhhccCCCccccccchhhH-HHHHHHHHHHHHhhhh----------hHHHHHHHhHHHHHHHHHHH-hcC
Q psy10231 130 GMSSA-CYVYVAEICLPNDRGYLSAFGPV-FVSLGVLIVYSLGYIV----------TWQYTSAACAVVALVGFAAM-HAV 196 (607)
Q Consensus 130 g~~~~-~~~~i~e~~~~~~r~~~~~~~~~-~~~lG~~ig~~l~~~l----------~Wr~~f~~~~~~~~~~~~~~-~~~ 196 (607)
+..+. +..|+.+..|++.|+++.+++.. ..++|..+|..+++++ .|...+.+.+...++..++. ++.
T Consensus 316 ~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 316 GLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999 99999999999999999999875 4789999999999888 45566666666666655543 444
Q ss_pred CCC
Q psy10231 197 PET 199 (607)
Q Consensus 197 pes 199 (607)
+|+
T Consensus 396 k~~ 398 (400)
T PF03825_consen 396 KPK 398 (400)
T ss_pred cCC
Confidence 544
No 233
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.33 E-value=4e-06 Score=85.63 Aligned_cols=162 Identities=11% Similarity=-0.063 Sum_probs=112.6
Q ss_pred hhHHHHHHHHHHHHH-HhC----CCcc-hHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHHHHHHHHhhhhh
Q psy10231 385 SGMYIVLYYAVNFFE-DAG----SSLD-DYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMALSMGISGTYEY 457 (607)
Q Consensus 385 ~~~~~~~~~~~~~~~-~~g----~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~~~~~~~~~~~~ 457 (607)
.++|.+..-+..|+. +.+ ++.+ +......++...-...+++|+++|| +|+|+...++.+++.++.++++...
T Consensus 35 FsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~- 113 (498)
T COG3104 35 FSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS- 113 (498)
T ss_pred HhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc-
Confidence 345555555555543 233 5443 4445555666666778899999999 6999999999999999999987621
Q ss_pred hhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCccc--hhhHHHHHHHHHHHHHHHHhhhcHHHHHhhh
Q psy10231 458 YFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLSV--RGIMGGIVCSLGYLFIFTTVKMYPDLMYLLN 535 (607)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g 535 (607)
........+. +.+........=+....+..|.+|++. |-.+.++.++..++|+.++|.+.+++.++.|
T Consensus 114 ---------~~~~~gl~i~-L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g 183 (498)
T COG3104 114 ---------VSGPGGLYIG-LALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG 183 (498)
T ss_pred ---------cccccHHHHH-HHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC
Confidence 0111122222 222222222334555688899987643 6778888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhc
Q psy10231 536 MGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
|...|...++-+.++.+..++.
T Consensus 184 ~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 184 WHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999988888888777765544
No 234
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.32 E-value=2.9e-06 Score=89.45 Aligned_cols=138 Identities=13% Similarity=0.173 Sum_probs=112.6
Q ss_pred hhhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc
Q psy10231 33 LHCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS 112 (607)
Q Consensus 33 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a 112 (607)
.++..+.........+.+.+. .++.+ ...+.+.....++..++.+++++++||+|+|+++..+.++.+++.++..+.
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~--vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTY--VLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHH--HhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 344444555545555555541 23333 678888889999999999999999999999999999999999999999888
Q ss_pred c--chhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC-------CccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 113 K--GFTLLCVGRFITGMAIGMSSA-CYVYVAEICLP-------NDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 113 ~--~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~-------~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
+ |.+.+++.-++.|++.+.... ..++++|..+. ++.|...+......-+|..+++.+.+.+
T Consensus 311 ~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 311 GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 6 999999999999999999999 99999998873 3348888899888888888888877755
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.31 E-value=3.7e-06 Score=89.39 Aligned_cols=145 Identities=11% Similarity=0.112 Sum_probs=118.0
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc----------cchhHHHHHHHHH
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS----------KGFTLLCVGRFIT 125 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a----------~~~~~l~~~R~l~ 125 (607)
++|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 789999999999999999999999999999999999999999999999887654311 4444566678899
Q ss_pred hhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh----h-----HHHHH---HHhHHHHHHHHHH
Q psy10231 126 GMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV----T-----WQYTS---AACAVVALVGFAA 192 (607)
Q Consensus 126 G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l----~-----Wr~~f---~~~~~~~~~~~~~ 192 (607)
+++.+.... ...++.+..|++++|...++.....++|..+++.+++.+ | ++..+ .++.+..++.+..
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999999999888877 2 33333 2333444444445
Q ss_pred HhcCCCCh
Q psy10231 193 MHAVPETP 200 (607)
Q Consensus 193 ~~~~pes~ 200 (607)
.+++|+..
T Consensus 442 ~~llP~~~ 449 (468)
T TIGR00788 442 LHLLPRLE 449 (468)
T ss_pred HHhCCCCc
Confidence 56789743
No 236
>KOG0253|consensus
Probab=98.28 E-value=1.9e-06 Score=83.87 Aligned_cols=129 Identities=19% Similarity=0.186 Sum_probs=101.3
Q ss_pred HHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCcccc
Q psy10231 72 VISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGY 150 (607)
Q Consensus 72 ~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~ 150 (607)
.+.-.-|.++.+.+.||+|||+.+..+.++++++.++...+.+-....+.-|..-+...+.+. .++|.-|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 345556889999999999999999999999999999988876644444444444444555566 8899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHhhhh--hHHHHHHHhHHHHHHHHHHHhcCCCCh
Q psy10231 151 LSAFGPVFVSLGVLIVYSLGYIV--TWQYTSAACAVVALVGFAAMHAVPETP 200 (607)
Q Consensus 151 ~~~~~~~~~~lG~~ig~~l~~~l--~Wr~~f~~~~~~~~~~~~~~~~~pes~ 200 (607)
..|.-..+.-+|.++.|+++... +-.....+.+...+++.++.+++|-.+
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999443 444455666677777777778888443
No 237
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.26 E-value=4.9e-05 Score=77.05 Aligned_cols=124 Identities=8% Similarity=-0.016 Sum_probs=86.8
Q ss_pred cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHh
Q psy10231 62 DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVA 140 (607)
Q Consensus 62 ~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~ 140 (607)
...+.+.-+-.+...+.-+.+.++.+|+.-+.=..++.+++.++.++.++++|.+.=+++-++.+++.|..-. ...+ +
T Consensus 59 ~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t 137 (402)
T PF02487_consen 59 VSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-T 137 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-H
Confidence 3345555556666677777888889988766556677778888999999999999999999999999998888 6665 4
Q ss_pred hccCCCccccccchhhHHHHHHHHHHHHHhhhh-----hHHHHHHHhHHHHHHHH
Q psy10231 141 EICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-----TWQYTSAACAVVALVGF 190 (607)
Q Consensus 141 e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-----~Wr~~f~~~~~~~~~~~ 190 (607)
..+++ ...+.+..|.+.+.++|+..-..+ +-|..+.+..++.++..
T Consensus 138 ~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~ 188 (402)
T PF02487_consen 138 HFYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFL 188 (402)
T ss_pred HhcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH
Confidence 45553 356777777777777776544333 33555555544444333
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.25 E-value=1.5e-05 Score=85.10 Aligned_cols=113 Identities=10% Similarity=0.046 Sum_probs=89.5
Q ss_pred CccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh-----ccchhHHHHHHHHHhhhhhhHhh
Q psy10231 60 SSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV-----SKGFTLLCVGRFITGMAIGMSSA 134 (607)
Q Consensus 60 s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~-----a~~~~~l~~~R~l~G~g~g~~~~ 134 (607)
+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777899999999999999999999999888877766655432 34567777788899999999999
Q ss_pred -hHhHHhhccCC-------CccccccchhhHHHHHHHHHHHHHhhh
Q psy10231 135 -CYVYVAEICLP-------NDRGYLSAFGPVFVSLGVLIVYSLGYI 172 (607)
Q Consensus 135 -~~~~i~e~~~~-------~~r~~~~~~~~~~~~lG~~ig~~l~~~ 172 (607)
..+++.|..+. ++.|...+......-+|..+++.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999662 223567888888888888888777664
No 239
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.19 E-value=0.0013 Score=68.00 Aligned_cols=130 Identities=12% Similarity=0.006 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCC
Q psy10231 391 LYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPL 469 (607)
Q Consensus 391 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (607)
...+..|+...|++.. .+..-....+.++.+.++..++.+|+|..+.-..+......+..+.......+.. +....
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~---~~~~~ 354 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGS---PFSSI 354 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCC---Cchhh
Confidence 3344556666677544 3555666677888999999999999998887777766655554443333322221 00011
Q ss_pred ChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHH
Q psy10231 470 NWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTT 523 (607)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~ 523 (607)
....++..+...=.+--++--...-+..|..|++.||...|.-+...++...+.
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 111122222222111222222233678899999999999999998888765553
No 240
>PRK09669 putative symporter YagG; Provisional
Probab=98.19 E-value=1.7e-05 Score=84.10 Aligned_cols=112 Identities=14% Similarity=0.183 Sum_probs=87.3
Q ss_pred cchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHh--ccchhHHHHHHHHHhhhhhhHhh-hHhH
Q psy10231 62 DDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITV--SKGFTLLCVGRFITGMAIGMSSA-CYVY 138 (607)
Q Consensus 62 ~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~--a~~~~~l~~~R~l~G~g~g~~~~-~~~~ 138 (607)
...+.+.....++..++.+++++++||+|+|+.+..+.++..++.+...+ .++.+.+++..++.|++.+...+ ..++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888889999999999999999999888766654443333 35777888889999999999999 9999
Q ss_pred HhhccCC-------CccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 139 VAEICLP-------NDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 139 i~e~~~~-------~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
++|..+. ++.|...+.......+|..+|+.+++.+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988762 2235667888888888888888888766
No 241
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.18 E-value=3.2e-08 Score=105.21 Aligned_cols=145 Identities=16% Similarity=0.110 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
........++..+|+++.|++.||+|||+.+..+..+..++.++.++... ..+.+...+.-.+.+. ...+
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~R~~~G~-~~g~ 118 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS---------YNNFWMLLIGRFLIGF-GIGG 118 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc---------cccccccccccccccc-cccc
Confidence 45666777888999999999999999999999999988888877766210 0022222222222222 2233
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh---hhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL---LNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
..+....++.|..|++.|+...++.+....+|..++..+.....+. .+|+..+...+..+++..+ ...++||+.+
T Consensus 119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~ 196 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPR 196 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 3455668999999999999999998888878777766554433222 3366555555555544433 3466788743
No 242
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.14 E-value=9.2e-06 Score=82.75 Aligned_cols=144 Identities=11% Similarity=0.129 Sum_probs=119.3
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA- 134 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~- 134 (607)
+-+.+....|.+.+...+.-++.-.+..++.+|+|.|+.++++.+++.+=-+++++++|.+.+.+.+.+.|+-.+....
T Consensus 253 ~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 253 SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3344566789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHhhccCCCccccccchh-hHHHHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHH-HhcCCCC
Q psy10231 135 CYVYVAEICLPNDRGYLSAFG-PVFVSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAA-MHAVPET 199 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~-~~~~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~-~~~~pes 199 (607)
...|+++.+|++-.++...+. +...++|..+...+++.+ |.+..|++.+.+.++..+. .+.+++.
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999999988877777664 788888888888888877 8899998888877665544 3445443
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.11 E-value=2.1e-06 Score=65.97 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=71.7
Q ss_pred ccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhH
Q psy10231 38 LTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTL 117 (607)
Q Consensus 38 ~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~ 117 (607)
......++++|.+++ |.++|.++.||+.+..++|+.+|++...++.++..+++.+..+.+...+..+.+++.++++.
T Consensus 6 igRFayTplLP~M~~---~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQA---DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hHHHHHHhHhHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 334456889999999 99999999999999999999999999999999988899999999999999999999998876
Q ss_pred HH
Q psy10231 118 LC 119 (607)
Q Consensus 118 l~ 119 (607)
+.
T Consensus 83 w~ 84 (85)
T PF06779_consen 83 WS 84 (85)
T ss_pred Hh
Confidence 53
No 244
>KOG2533|consensus
Probab=98.07 E-value=2.2e-05 Score=82.75 Aligned_cols=143 Identities=12% Similarity=-0.019 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
+....++.++.+++.+.++.+.||++..+.+....+.-.+..++-.. ..+...+++.-++.+.+..+
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-------------~~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-------------VHSFPGLIALRFLLGLFESG 150 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-------------HhhhHHHHHHHHHHHHHhcc
Confidence 55778888999999999999999999554444333332222211111 11223334444444445555
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH------hhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY------LLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
..|....++...|.++.|+.-+|+.+....+|++.++.+...+.+ ..||++.|.+-++++++.++++++++|+.
T Consensus 151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 567777899999999999999999999999999999988887643 46899999999999999999999999876
Q ss_pred CC
Q psy10231 562 QG 563 (607)
Q Consensus 562 ~~ 563 (607)
..
T Consensus 231 P~ 232 (495)
T KOG2533|consen 231 PS 232 (495)
T ss_pred hh
Confidence 55
No 245
>KOG2816|consensus
Probab=98.06 E-value=6.7e-05 Score=78.47 Aligned_cols=138 Identities=13% Similarity=0.139 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhh
Q psy10231 414 VAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPW 493 (607)
Q Consensus 414 ~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (607)
.++..++.+...|.++||+|||..+....+...+....+.+. ..|..+ ... ..+.........+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~-------------~~~~~~--~~~-l~g~~~~~~s~~~ 134 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ-------------GYWFFL--LLG-LSGGFSAIFSVGF 134 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH-------------HHHHhh--hcc-cccchhhhhhhhh
Confidence 467788899999999999999999888877777766665541 122222 111 1222222345566
Q ss_pred hhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCHH
Q psy10231 494 VMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTLL 567 (607)
Q Consensus 494 ~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (607)
+++++...++.|....|+.+.....+..++|.+.+.+.+..|...++.+.....++..+...+.+||+...+.+
T Consensus 135 a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 135 AYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred hheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999998766543
No 246
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.04 E-value=2e-05 Score=77.15 Aligned_cols=166 Identities=14% Similarity=0.121 Sum_probs=127.5
Q ss_pred cccCcchhHHHhhhcccccccccc---ccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-cCchhhhh
Q psy10231 22 ISSDDASWIGKLHCNNLTHAIPSI---LIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-GRKTTVQL 97 (607)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~---~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-Grr~~l~~ 97 (607)
..++...|-..++ .|+....... =+|.+.. |-|.|..+.|++.+...+.....++....+++|. .+|+..+.
T Consensus 204 vw~~~~aW~vtLf-mGlqS~~~Y~~~~WLP~ili---~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~ 279 (395)
T COG2807 204 VWRSPLAWQVTLF-MGLQSLLYYIVIGWLPAILI---DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVL 279 (395)
T ss_pred cccCchhHHHHHH-HHhhHHHHHHHHHHHHHHHH---HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 4556667876664 3444433323 3466666 8999999999999999999999999999999965 56777777
Q ss_pred hhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCc-cccccchhhHHHHHHHHHHHHHhhhh--
Q psy10231 98 TAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPND-RGYLSAFGPVFVSLGVLIVYSLGYIV-- 173 (607)
Q Consensus 98 ~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~-r~~~~~~~~~~~~lG~~ig~~l~~~l-- 173 (607)
...++.++...+.+.+.-..+.. -++.|+|.|+.++ +.+.+.+..+..+ -++..++.+....+=..+||.+.+++
T Consensus 280 ~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD 358 (395)
T COG2807 280 ALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD 358 (395)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH
Confidence 88888888888878776544444 4999999999999 9999998887544 46666676666666667788888888
Q ss_pred ---hHHHHHHHhHHHHHHHHHH
Q psy10231 174 ---TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 174 ---~Wr~~f~~~~~~~~~~~~~ 192 (607)
+|+...+......+...+.
T Consensus 359 a~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 359 ATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred hcCChHHHHHHHHHHHHHHHHH
Confidence 8999988888777766653
No 247
>KOG3574|consensus
Probab=98.02 E-value=0.00052 Score=67.50 Aligned_cols=128 Identities=11% Similarity=0.056 Sum_probs=83.1
Q ss_pred hhccccccccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh-----hhcCchhhhh-hhhHHHHHHH
Q psy10231 34 HCNNLTHAIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD-----LLGRKTTVQL-TAIPFIIGWT 107 (607)
Q Consensus 34 ~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D-----r~Grr~~l~~-~~~l~~~~~~ 107 (607)
.+-|.-.|..+ .+|.+-+ .-|.|-++.+...-++.= + .--+.+.++.| |+||||..++ +..+.+....
T Consensus 41 llQGiP~GL~~-~iP~lL~---ak~vSyt~~a~fS~ay~P-~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~ml 114 (510)
T KOG3574|consen 41 LLQGIPLGLIG-AIPLLLQ---AKGVSYTSQAIFSFAYWP-F-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFML 114 (510)
T ss_pred HHcCCchhHhh-hhHHHhc---CCCcchhhhhhhhhhhhH-H-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHH
Confidence 34577777777 8888887 667777777655433221 1 12578899999 9999987665 3333333333
Q ss_pred HHHhc-----------cchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHH
Q psy10231 108 IITVS-----------KGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 108 ~~a~a-----------~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~ 167 (607)
+.+.- +|...+...-++.-+..+.--. .-.+.-.+..+++-|-+.....++...|.+++.
T Consensus 115 lLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 115 LLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 33221 3344444455666666666666 667777788888888888888877777777654
No 248
>KOG0252|consensus
Probab=98.01 E-value=6e-05 Score=75.95 Aligned_cols=111 Identities=14% Similarity=0.035 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC-CChHHHHHHHHHHHHHH
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP-LNWIPLACILANVCASM 485 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 485 (607)
.........++.++|.++.|++.||+|||++.-..+++++++.++.++.... +.. .....+.+.=.+.+...
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~-------~~~~~~m~~L~~~R~~LGiGI 158 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT-------TSPLGVMMTLCFFRFLLGIGI 158 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC-------CCCcchhhHHHHHHHHhhccc
Confidence 3556677788899999999999999999999999888888888765552111 111 11122222222233333
Q ss_pred hccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHh
Q psy10231 486 LGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTV 524 (607)
Q Consensus 486 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~ 524 (607)
.+=.|+..++++|....+.||.-.+....++..|...+.
T Consensus 159 GGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 159 GGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred cCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 345788889999999999999887776666665544433
No 249
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.97 E-value=0.012 Score=61.89 Aligned_cols=124 Identities=6% Similarity=0.070 Sum_probs=91.5
Q ss_pred cccccCCCccccc-----CccchhHHHHHHHHHhhHh-hhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc----cc--
Q psy10231 47 IPQLQKPSSIISI-----SSDDASWIASLGVISTPVG-SLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS----KG-- 114 (607)
Q Consensus 47 ~p~l~~~~~~~~~-----s~~~~~~i~s~~~l~~~i~-~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a----~~-- 114 (607)
+-.++| .+.+ +...+.++-+...+..++. .++.+++++|++|++++-+....+...-++.++. ++
T Consensus 26 LR~lKD---~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~ 102 (472)
T TIGR00769 26 LRDTKD---TLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLL 102 (472)
T ss_pred HHhhhh---heeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhc
Confidence 345555 6555 3357889998888877777 8999999999999999988888777777776655 11
Q ss_pred -------------------------hhHHHHHHHHHhhhhhhHhh--hHhHHhhccCCCccccccchhhHHHHHHHHHHH
Q psy10231 115 -------------------------FTLLCVGRFITGMAIGMSSA--CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 115 -------------------------~~~l~~~R~l~G~g~g~~~~--~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~ 167 (607)
.|...+.-+..-+-...... -..++.|.++.++-.|..++...+.++|.++++
T Consensus 103 ~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg 182 (472)
T TIGR00769 103 HPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSG 182 (472)
T ss_pred CCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333344444444443 567889999999999999999999999999999
Q ss_pred HHhhhh
Q psy10231 168 SLGYIV 173 (607)
Q Consensus 168 ~l~~~l 173 (607)
.+..++
T Consensus 183 ~~~~~~ 188 (472)
T TIGR00769 183 RTIKYF 188 (472)
T ss_pred HHHHHH
Confidence 887665
No 250
>KOG3810|consensus
Probab=97.97 E-value=0.0011 Score=64.48 Aligned_cols=145 Identities=15% Similarity=0.168 Sum_probs=108.9
Q ss_pred ccccCccchh-HHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh
Q psy10231 56 IISISSDDAS-WIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA 134 (607)
Q Consensus 56 ~~~~s~~~~~-~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~ 134 (607)
+.++++.|.. -+.-...-.+.+.-++.=.+.|-.--|++++.-.+.......+.-+.++.+.+=+.-++.|...+....
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIA 114 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIA 114 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHh
Confidence 5566666543 223333445556667777889999999999998888888888889999999999999999999988887
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh------hHHHHHHHhHHHHHHHHHHHhcCCCCh
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV------TWQYTSAACAVVALVGFAAMHAVPETP 200 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------~Wr~~f~~~~~~~~~~~~~~~~~pes~ 200 (607)
-++|+-+..+|+++.++.+.-....-.|...|..++..+ +++..-.+......++....+++|..+
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 889999999999999999999888888888888888877 444444444444444444334444444
No 251
>PRK11462 putative transporter; Provisional
Probab=97.93 E-value=0.00045 Score=73.39 Aligned_cols=168 Identities=9% Similarity=-0.034 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHH-hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc----cCCch-hHHHhhHHHHHHHHHHhhhhhhh
Q psy10231 387 MYIVLYYAVNFFED-AGSSLD-DYVASIIVAGLRFFMAIIGSACIQM----FSRRA-LATTSAFFMALSMGISGTYEYYF 459 (607)
Q Consensus 387 ~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~----~grr~-~l~~~~~~~~~~~~~~~~~~~~~ 459 (607)
...+..|+..++.+ .|.+.. .+....+.-+...+..++.|+++|| +|||+ .+..+.+..+++..++.. .+
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~---~p 101 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS---TP 101 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh---CC
Confidence 34555666666654 466543 4556666677888999999999997 57754 455565666665544322 11
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccC-ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhh----
Q psy10231 460 SELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFP-LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL---- 534 (607)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~---- 534 (607)
.. ..........+..+++..++.....| ..++.+|+.+ .++|++..+.-...+.+|..+++.+...+....
T Consensus 102 ~~---s~~~~~~y~~~~~~~~~~~~t~~~ip-y~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~ 177 (460)
T PRK11462 102 DL---SMNGKMIYAAITYTLLTLLYTVVNIP-YCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDN 177 (460)
T ss_pred CC---CcchHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 10 00011112222333333344333333 2377778766 688999999999999888888777765555443
Q ss_pred ---hhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 535 ---NMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 535 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
+|.....+++++.+++..+++...+|.
T Consensus 178 ~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 178 KPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 344445555555555554544444443
No 252
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.93 E-value=0.00015 Score=72.77 Aligned_cols=162 Identities=17% Similarity=0.225 Sum_probs=128.7
Q ss_pred chhHHHhhhcccccccccccc-ccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhh-hhcCchhhhhhhhHHHH
Q psy10231 27 ASWIGKLHCNNLTHAIPSILI-PQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMD-LLGRKTTVQLTAIPFII 104 (607)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~D-r~Grr~~l~~~~~l~~~ 104 (607)
+.++..+++..+.+.+--.++ |+=.+ -|+++..|..-+.+....|..++-...|++.. |.++|+...+++....+
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~---Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGE---VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 344555554444444433333 44444 78999999999999999999999999999888 67888888888887777
Q ss_pred HHHHHH---hccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-------
Q psy10231 105 GWTIIT---VSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV------- 173 (607)
Q Consensus 105 ~~~~~a---~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------- 173 (607)
+..+.. ...+.+.+...-++.|++.|.... ..+.+.|+..+++-|..++.|.....++..++..+++.+
T Consensus 288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~ 367 (403)
T PF03209_consen 288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL 367 (403)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544 447889999999999999999999 999999999999999999999999998888888888776
Q ss_pred -------hHHHHHHHhHHHHHHHHH
Q psy10231 174 -------TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 174 -------~Wr~~f~~~~~~~~~~~~ 191 (607)
+|-.+|.+.++.-++.+.
T Consensus 368 ~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 368 FGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHH
Confidence 566777777766665554
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.93 E-value=8.7e-05 Score=65.15 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=96.0
Q ss_pred ccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hH
Q psy10231 58 SISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CY 136 (607)
Q Consensus 58 ~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~ 136 (607)
++++..--.-.++......+++++.+.+.+++|.|+.+++|.+.+.+-.+.. +-++.+.++.+-++.|++.+..++ .-
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 4555555556677777888899999999999999999999999988655443 567889999999999999999999 89
Q ss_pred hHHhhccCCCccccccchhhHHHHHHHHHHHHHhhh
Q psy10231 137 VYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYI 172 (607)
Q Consensus 137 ~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~ 172 (607)
.++.+..++++|++-.+++-.....+.++|.++...
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888888766543
No 254
>KOG4686|consensus
Probab=97.93 E-value=6e-05 Score=70.87 Aligned_cols=165 Identities=16% Similarity=0.092 Sum_probs=119.1
Q ss_pred chhHHHhhhcccccccc---ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHH-
Q psy10231 27 ASWIGKLHCNNLTHAIP---SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPF- 102 (607)
Q Consensus 27 ~~~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~- 102 (607)
.-|+...++..+...+. +.--..+++ .||+|+...+.+.+....-.++.+++.|.++|++|++...+.+..+.
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~~fF~~---rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGPMFFQK---RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHHHHHH---hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 35777766665544432 111123445 89999999999999999999999999999999999998777655444
Q ss_pred HHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh-------h
Q psy10231 103 IIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV-------T 174 (607)
Q Consensus 103 ~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l-------~ 174 (607)
.++-....| +++.=.++..+.|+....... ....++-..|+++-|.+.+..+...++|-.+.+++++.+ .
T Consensus 342 l~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 342 LLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 444444433 344445677888988887777 777888889999999999999999999999999999988 2
Q ss_pred HHH-HHHHhHHHHHHHHHHHhcC
Q psy10231 175 WQY-TSAACAVVALVGFAAMHAV 196 (607)
Q Consensus 175 Wr~-~f~~~~~~~~~~~~~~~~~ 196 (607)
|-- .|.+++.+++....+++.+
T Consensus 420 ~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 420 NLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhe
Confidence 333 3444555555544443333
No 255
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.89 E-value=0.00061 Score=67.99 Aligned_cols=153 Identities=10% Similarity=-0.008 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCC
Q psy10231 391 LYYAVNFFEDAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPL 469 (607)
Q Consensus 391 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (607)
-...|.+.+..+.+. ++......+..+..++++..+++.+|+|+|+-++.+..++++++.++.-... ..
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~----------~~ 102 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS----------SK 102 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh----------hh
Confidence 444566655556654 4667777788888999999999999999999999999999998877632110 11
Q ss_pred ChHHHHHHHHHHHHHHhc-cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh---------------
Q psy10231 470 NWIPLACILANVCASMLG-MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL--------------- 533 (607)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~--------------- 533 (607)
.+. ..+..+|..+.+.+ .-+..+.++..+.|++..+.-+.+...+..+|++++|.+.+++..+
T Consensus 103 ~y~-~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 103 SYG-FFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred hHH-HHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 121 22222222222222 2344557888888888888889999999999999999999988873
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHh
Q psy10231 534 ----LNMGGMMWAFSCACLLAMVFI 554 (607)
Q Consensus 534 ----~g~~~~~~~~~~~~~~~~~~~ 554 (607)
..++.++...+...++..+..
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 124456666666666555543
No 256
>KOG2325|consensus
Probab=97.82 E-value=8e-05 Score=77.06 Aligned_cols=161 Identities=10% Similarity=0.019 Sum_probs=105.6
Q ss_pred HHHHHhCCCcc---hHHHHHHHHHHHHHHHHHHhHhhcccCC-chhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCCh
Q psy10231 396 NFFEDAGSSLD---DYVASIIVAGLRFFMAIIGSACIQMFSR-RALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNW 471 (607)
Q Consensus 396 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (607)
.|+++.+.+.+ -++......++..+++++.++...|.+. |+.++.+.+++.++.++.......+. ...+
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~-------~~~y 131 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPN-------GVKY 131 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhccc-------chHH
Confidence 45555444332 3566777889999999999999999886 78888899999999988855443321 1222
Q ss_pred HHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh-------------hhhHH
Q psy10231 472 IPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL-------------LNMGG 538 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~-------------~g~~~ 538 (607)
..+++=+ ..+.+.+.....=.|+++..-.+.|.++++......-++.++||.+...+... .-+..
T Consensus 132 ~mL~~R~--l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTa 209 (488)
T KOG2325|consen 132 LMLVARI--LTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTA 209 (488)
T ss_pred HHHHHHH--HcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecch
Confidence 3222222 22333333444447888877777888888887776677777776655433221 11345
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCC
Q psy10231 539 MMWAFSCACLLAMVFIQAFLPETQGKT 565 (607)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (607)
+-|+.+.+.++..++..++++|..+..
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccCc
Confidence 788888888888888888888765443
No 257
>KOG3762|consensus
Probab=97.79 E-value=6.6e-05 Score=77.11 Aligned_cols=140 Identities=12% Similarity=0.043 Sum_probs=118.5
Q ss_pred CcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHh
Q psy10231 54 SSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 54 ~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~ 133 (607)
.+|.+-.+.-.|.....-..|-.+.-++.+++..++|+-+++..++..+.+=.+.....+|.|+.+..-+++|+..+.++
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 34667777788888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hHhHHhhccCCCccccccchhhHH-HHHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHHH
Q psy10231 134 A-CYVYVAEICLPNDRGYLSAFGPVF-VSLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAAM 193 (607)
Q Consensus 134 ~-~~~~i~e~~~~~~r~~~~~~~~~~-~~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~~ 193 (607)
. ..+|++...||+-|..+.++++.. .++|--+|.++|+.+ +=|..|.+.++.+++.+++.
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHH
Confidence 9 999999999999998888887433 455555555555554 78888888888877766644
No 258
>KOG1237|consensus
Probab=97.62 E-value=0.0013 Score=70.75 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=117.1
Q ss_pred cccccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhh-cCchhhhhhhhHHHHHHHHHHhccc-----
Q psy10231 41 AIPSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLL-GRKTTVQLTAIPFIIGWTIITVSKG----- 114 (607)
Q Consensus 41 ~~~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-Grr~~l~~~~~l~~~~~~~~a~a~~----- 114 (607)
++...++..+.. ++|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..++..
T Consensus 55 g~~~nlv~ylt~---~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~ 131 (571)
T KOG1237|consen 55 GLVSNLVTYLTL---ELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALL 131 (571)
T ss_pred cchhHHHHHHHH---HhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 444566666677 8888888888888889888889999999999965 9999999999998888665544311
Q ss_pred --------------------hhHHHHHHHHHhhhhhhHhh-hHhHHhhccC---CCc---cccccchhhHHHHHHHHHHH
Q psy10231 115 --------------------FTLLCVGRFITGMAIGMSSA-CYVYVAEICL---PND---RGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 115 --------------------~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~---~~~---r~~~~~~~~~~~~lG~~ig~ 167 (607)
...+..+.-+..+|.|+.-+ ..++-+|-++ +++ +...+.++....++|..++-
T Consensus 132 p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 132 PFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHH
Confidence 23666778888899999999 9999999998 322 24778888888999998887
Q ss_pred HHhhhh----hHHHHHHHhHHHHHHHHH
Q psy10231 168 SLGYIV----TWQYTSAACAVVALVGFA 191 (607)
Q Consensus 168 ~l~~~l----~Wr~~f~~~~~~~~~~~~ 191 (607)
.+-.+. +|.+.|.+..+..+++.+
T Consensus 212 t~~vyiq~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 212 TVLVYIQDNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred HHHHhhhhcccceeeccHHHHHHHHHHH
Confidence 777666 999999988887766655
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.52 E-value=6.1e-05 Score=57.50 Aligned_cols=60 Identities=13% Similarity=0.226 Sum_probs=50.0
Q ss_pred cccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHH
Q psy10231 43 PSILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPF 102 (607)
Q Consensus 43 ~~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~ 102 (607)
.+...|.+....++.|+|..|+|.+.++..+...++++++|.++||+||++..+....++
T Consensus 16 ~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 16 LGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 345556666555589999999999999999999999999999999999998877665543
No 260
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.51 E-value=0.00064 Score=70.33 Aligned_cols=118 Identities=14% Similarity=0.207 Sum_probs=96.9
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhcc--chhHHHHHHHHHhhhhhhHh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSK--GFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~--~~~~l~~~R~l~G~g~g~~~ 133 (607)
-++.++.+..+.......+..++.+++.++++|+|+|+++..+.++..++.++.-+.+ +.+.+++..++.++|.+...
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~ 345 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIAN 345 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccc
Confidence 4455677777888888888888899999999999999999999999999999998876 78899999999999999999
Q ss_pred h-hHhHHhhccC------CCcc-ccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 134 A-CYVYVAEICL------PNDR-GYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 134 ~-~~~~i~e~~~------~~~r-~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
+ ..+++.|..+ .++| |...+......=+|..++..+.++.
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 8888887664 2222 6777777777777777777555544
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.39 E-value=0.014 Score=58.07 Aligned_cols=160 Identities=14% Similarity=0.035 Sum_probs=87.3
Q ss_pred HHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCC
Q psy10231 392 YYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLN 470 (607)
Q Consensus 392 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (607)
.|.-.++++.|++.. ...........+.+...+.|.+.||+|||+..+...++..++++.--. ...
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-------------~~~ 121 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-------------SNY 121 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-------------ccc
Confidence 333344466677544 444555555667788888999999999999888877777777754321 222
Q ss_pred hHHHHHHHHHHHHHHhccchhhhhhhccc----cCccchhhHHHHHHHHHH-HHHHHHhhhcHHHHHhhhh--HHHHHHH
Q psy10231 471 WIPLACILANVCASMLGMLQLPWVMIAEL----FPLSVRGIMGGIVCSLGY-LFIFTTVKMYPDLMYLLNM--GGMMWAF 543 (607)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~p~~~r~~~~g~~~~~~~-~~~~i~~~i~~~l~~~~g~--~~~~~~~ 543 (607)
+..+..=++.+.........--.=++.|. +|++..+...+......+ +.++.+..+.-.+.+..+. ..+|...
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a 201 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAA 201 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHH
Confidence 23222222222221111111111123333 444444444444442322 3334444444455555544 5688887
Q ss_pred HHHHHHHHHHhhhcccCCCCC
Q psy10231 544 SCACLLAMVFIQAFLPETQGK 564 (607)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~ 564 (607)
..+.+++.+++...-+|..+.
T Consensus 202 ~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 202 IVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHHhcccccCCC
Confidence 777777777776666776554
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.36 E-value=0.0063 Score=66.86 Aligned_cols=151 Identities=13% Similarity=-0.025 Sum_probs=96.2
Q ss_pred hCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHH
Q psy10231 401 AGSSLD-DYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACIL 478 (607)
Q Consensus 401 ~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (607)
.+.+.. +......+....-+..+++|++.|+ +|+++.+..+.++..++..++.+...... .+..........+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~-----~~~~~~~~~l~gL 92 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS-----GHPLHDLLDLLGL 92 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc-----ccchHHHHHHHHH
Confidence 455433 3444444555556677788999987 79999999888888888877765211100 0011111122223
Q ss_pred HHHHHHHhccchhhhhhhccccCcc---chhhHHHHHHHHHHHHHHHHhhhcHHHHHhh-------hhHHHHHHHHHHHH
Q psy10231 479 ANVCASMLGMLQLPWVMIAELFPLS---VRGIMGGIVCSLGYLFIFTTVKMYPDLMYLL-------NMGGMMWAFSCACL 548 (607)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~-------g~~~~~~~~~~~~~ 548 (607)
.++.++..+.-|...+...|.++++ .|.+...+.++..++|+.+++.+.+++.+.. +|...|.+.+++++
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 3333333334455557777877653 4678899999999999999999999887543 47777777777777
Q ss_pred HHHHHhhh
Q psy10231 549 LAMVFIQA 556 (607)
Q Consensus 549 ~~~~~~~~ 556 (607)
++.++...
T Consensus 173 ia~lvf~~ 180 (654)
T TIGR00926 173 LALIVFMA 180 (654)
T ss_pred HHHHHHHH
Confidence 76665443
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.32 E-value=0.0041 Score=64.13 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=82.1
Q ss_pred hhhhhhhhHHHHHHHHHHhc--c-ch------hHHHHHHHHHhhhhhhHhh-hHhHHhhccCCC---ccccccchhhHHH
Q psy10231 93 TTVQLTAIPFIIGWTIITVS--K-GF------TLLCVGRFITGMAIGMSSA-CYVYVAEICLPN---DRGYLSAFGPVFV 159 (607)
Q Consensus 93 ~~l~~~~~l~~~~~~~~a~a--~-~~------~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~~---~r~~~~~~~~~~~ 159 (607)
|+++++.+++.+|.++..++ + +. ..++++-++.++|.|+.-| ..++++|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788889999998884444 2 22 6889999999999999999 999999999876 3567788899999
Q ss_pred HHHHHHHHHHhhhh----hHHHHHHHhHHHHHHHHHH
Q psy10231 160 SLGVLIVYSLGYIV----TWQYTSAACAVVALVGFAA 192 (607)
Q Consensus 160 ~lG~~ig~~l~~~l----~Wr~~f~~~~~~~~~~~~~ 192 (607)
++|..++..+..++ +|.+.|.+.++..+++.+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 99999999888888 8999999998887776653
No 264
>KOG2563|consensus
Probab=97.18 E-value=0.013 Score=59.46 Aligned_cols=122 Identities=16% Similarity=0.038 Sum_probs=79.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCCh--HHHHHHHHHHH
Q psy10231 405 LDDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNW--IPLACILANVC 482 (607)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 482 (607)
..+.+...++.+..+...+.+-|+.||.|-|..+.++..+.+++..+=........ ++..+ +....-.+...
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v------~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFV------PPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccc------cccchhhhhHHhHHHHHH
Confidence 34567888888999999999999999999999999999888888765433211100 01122 11121111111
Q ss_pred HHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 483 ASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 483 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
... ....++.-+..-.||+++|++|..+..+...+|..++..+-+.+..+
T Consensus 153 Aq~-Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 153 AQP-FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hhh-HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 111 11122224555679999999999999999999988887776666543
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.15 E-value=0.033 Score=57.49 Aligned_cols=43 Identities=9% Similarity=-0.101 Sum_probs=32.9
Q ss_pred hhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 491 LPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 491 ~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
...++-+....+..-|+.+.+.|++.|+|+-.-..+.=++.|.
T Consensus 425 ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 425 AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3446667778889999999999999999987766555555554
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.10 E-value=0.021 Score=59.78 Aligned_cols=55 Identities=7% Similarity=-0.062 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhh
Q psy10231 471 WIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKM 526 (607)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i 526 (607)
+..++...+++...+.. .+..+.+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 373 ~~~~~~~~l~gltnGy~-~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYL-GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHH-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344443333332 34455778888888999888888888777777766543
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.98 E-value=0.01 Score=62.40 Aligned_cols=132 Identities=14% Similarity=0.078 Sum_probs=82.0
Q ss_pred HHHHHHhHhhcccC-----CchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhh
Q psy10231 420 FMAIIGSACIQMFS-----RRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWV 494 (607)
Q Consensus 420 ~~~~~~g~l~d~~g-----rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (607)
...++.|.++|-+. ||+-++++.++..++.+.++..... ..........+++...+... .-.+.-+
T Consensus 39 ~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~l~la~~g~a~-~DV~aDa 109 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS--------ESSAAIAVVLLFLASFGYAF-ADVAADA 109 (433)
T ss_pred HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc--------cchhhhHHHHHHHHHHHHHH-HHHhhhH
Confidence 35678899999963 4555566666665555555442110 01112222222222222211 1222334
Q ss_pred hhcccc---CccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q psy10231 495 MIAELF---PLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPET 561 (607)
Q Consensus 495 ~~~e~~---p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (607)
+.+|.. |.+ |+.-.+.......+|+.++..+.|.+.+..+++..|.+.+.+..+..+...+..+|.
T Consensus 110 ~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 110 LVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc
Confidence 555554 444 788888999999999999999999999999888888888777777766666666663
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.79 E-value=0.038 Score=48.62 Aligned_cols=106 Identities=8% Similarity=-0.035 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
+....+......+.+++.+.+.+++|.|+.++++.+...+-...... ...+..+....+.+.+.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------------~~~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------------PNSYTLYPASALLGFGAALL 106 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHhhhhHHh
Confidence 34455556667778888999999999999999888777655443321 23344555555555555555
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY 527 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~ 527 (607)
+.+. -.++.+...++.+++-.++...+.+.+..+|..+.
T Consensus 107 W~aq-g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 107 WTAQ-GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred hHhh-hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 5444 36778888888999988888888887777765544
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.70 E-value=0.036 Score=52.36 Aligned_cols=51 Identities=18% Similarity=0.294 Sum_probs=36.6
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHH---------HHhhHHHHhhhHHHHHHHHhhhccc
Q psy10231 256 NDRGYLSAFGPVFVSLGVLIVYSLGY---------IVTWQYTSAACAVVALVGFAAMHAV 306 (607)
Q Consensus 256 ~~r~~~~~~~~~~~~~g~~~~~~~~~---------~~~Wr~~~~~~~i~~~~~~~~~~~~ 306 (607)
|+|+....+...++.+|.++....-. ..+|++.+.+.+++.++-++.+.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67788888888888888777544311 2259999998888877776666554
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.64 E-value=0.013 Score=44.73 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=49.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhH
Q psy10231 382 QEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAF 443 (607)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~ 443 (607)
..+++...+.-|.+.++++.|++.. .+....+..+..+++.++.|.++||.++++.......
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3444567788889999998888654 5778888889999999999999999999887665443
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.36 E-value=0.34 Score=51.05 Aligned_cols=113 Identities=12% Similarity=0.006 Sum_probs=73.4
Q ss_pred HHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccC---------CCCC----------CChHHHHHHHH
Q psy10231 419 FFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSM---------DDRP----------LNWIPLACILA 479 (607)
Q Consensus 419 ~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----------~~~~~~~~~~~ 479 (607)
++..++.+++++|++|++++...........+++++......+... .... ..|... ...+
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~-~FYv 136 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFA-LFYV 136 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHH-HHHH
Confidence 3347788999999999998887766666666666665433222100 0000 012111 1222
Q ss_pred HHHHHHhccch-hhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH
Q psy10231 480 NVCASMLGMLQ-LPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY 532 (607)
Q Consensus 480 ~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~ 532 (607)
..-.++....+ +-|.+++|.+..++..+-.++....+++|..+++.+...+.+
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222232333 668999999999999999999999999999999988877663
No 272
>PRK03612 spermidine synthase; Provisional
Probab=96.27 E-value=0.074 Score=57.09 Aligned_cols=117 Identities=17% Similarity=0.059 Sum_probs=69.0
Q ss_pred ccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhh-hhhHHH-HHHHHH----Hhccch-hHHHHHHHHHhhh
Q psy10231 56 IISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQL-TAIPFI-IGWTII----TVSKGF-TLLCVGRFITGMA 128 (607)
Q Consensus 56 ~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~-~~~l~~-~~~~~~----a~a~~~-~~l~~~R~l~G~g 128 (607)
-+|.+..+.+.+.+++++|.++|+.+++++.++.-|+...+- ...+.+ ++..+. ++...+ ..+...-++.|+.
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 123 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLL 123 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999988754333322111 111111 111111 111111 2233445667888
Q ss_pred hhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 129 IGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 129 ~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
.|+..| ...+..+.. .++-+...+-......+|.++|.++.+++
T Consensus 124 ~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 124 IGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 888888 666555432 22234556667777777777777776655
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.17 E-value=0.25 Score=51.40 Aligned_cols=175 Identities=11% Similarity=0.016 Sum_probs=93.9
Q ss_pred hhhhHHHHHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhc
Q psy10231 383 EASGMYIVLYYAVNFFEDAGS-SL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFS 460 (607)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~g~-~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 460 (607)
...+.-...+-.+.++.+... +. ........-.+..++.+...|...||..|.+....+.+..-++...-+..+..-.
T Consensus 14 s~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~ 93 (432)
T PF06963_consen 14 STWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLL 93 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555555666655422 22 2455666667778888889999999999988766665443333322222111111
Q ss_pred cccCCCCCCChHH---HHHHHHHHHHHHhccchhhhhhhcc------cc--CccchhhHHHHHHHHHHHHHHHHhhhcHH
Q psy10231 461 ELSMDDRPLNWIP---LACILANVCASMLGMLQLPWVMIAE------LF--PLSVRGIMGGIVCSLGYLFIFTTVKMYPD 529 (607)
Q Consensus 461 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e------~~--p~~~r~~~~g~~~~~~~~~~~i~~~i~~~ 529 (607)
..........+.. +.....+....-.+ ........| +. +++.....++...-+-.+...++|.+.|.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~La--s~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~ 171 (432)
T PF06963_consen 94 SYPSSSSQSSWLFIALFALLILLGAIERLA--SIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGL 171 (432)
T ss_pred hCCccccccchHHHHHHHHHHHHHHHHHHH--HhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000011211 12222222222221 111122211 11 23334555555555556789999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhhhccc
Q psy10231 530 LMYLLNMGGMMWAFSCACLLAMVFIQAFLP 559 (607)
Q Consensus 530 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 559 (607)
+.+..+......+.++..+++..+=++++.
T Consensus 172 l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~ 201 (432)
T PF06963_consen 172 LMTFASPVIAAIFIAGWNLASVFVEYFLLA 201 (432)
T ss_pred HhhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888888888888877665543
No 274
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.81 E-value=2 Score=45.58 Aligned_cols=114 Identities=10% Similarity=0.123 Sum_probs=73.2
Q ss_pred CccchhHHHHHHHH-HhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc---------cc---------------
Q psy10231 60 SSDDASWIASLGVI-STPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS---------KG--------------- 114 (607)
Q Consensus 60 s~~~~~~i~s~~~l-~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a---------~~--------------- 114 (607)
+...+..+=....+ +..+...+..+++++++|.+++-+....+...-.+.++. ++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34445555554444 455567889999999999999988777777666666653 11
Q ss_pred -------hhHHHHHHHHHhhhhhhHhh--hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 115 -------FTLLCVGRFITGMAIGMSSA--CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 115 -------~~~l~~~R~l~G~g~g~~~~--~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
.|.+.+.-++.-+-.....+ -..+..|.++.++-.|..+++..+.++|.++++.+...+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111222222222222 356677888888888999999999999998887776655
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.67 E-value=0.0018 Score=69.62 Aligned_cols=132 Identities=10% Similarity=-0.082 Sum_probs=0.6
Q ss_pred HhCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccc--cC------------
Q psy10231 400 DAGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSEL--SM------------ 464 (607)
Q Consensus 400 ~~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~------------ 464 (607)
..+++. +.+.+....-++.++..++..++.+|..|-+++-.+.++++++.+++++=-+..... ..
T Consensus 32 RF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~ 111 (539)
T PF03137_consen 32 RFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISS 111 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccc
Confidence 446643 467778888888889999899999888887888888888888888776522111110 00
Q ss_pred --------------------CCCCCChHHHHHHHHHHHHHHh---ccchhhhhhhccccCccchhhHHHHHHHHHHHHHH
Q psy10231 465 --------------------DDRPLNWIPLACILANVCASML---GMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIF 521 (607)
Q Consensus 465 --------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~ 521 (607)
............+++.....+. ...++..+|+-|..+++..+...|+......+|-.
T Consensus 112 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 112 NLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ----------------------------------------SSS-------------------------------------
T ss_pred ccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 0001111122222222233333 34556678999999999999999999998888877
Q ss_pred HHhhhcHHHH
Q psy10231 522 TTVKMYPDLM 531 (607)
Q Consensus 522 i~~~i~~~l~ 531 (607)
+|-.+.+...
T Consensus 192 ~Gf~lg~~~L 201 (539)
T PF03137_consen 192 LGFLLGSFCL 201 (539)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 7766665444
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.65 E-value=0.34 Score=49.70 Aligned_cols=131 Identities=7% Similarity=-0.039 Sum_probs=75.1
Q ss_pred HHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhc
Q psy10231 418 RFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIA 497 (607)
Q Consensus 418 ~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (607)
.++.-+....+.|.++.|++++.+.+...+...++.+ .......-..-++-+..... -...++++-
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~-------------~~sv~~mq~~q~~yg~~~a~-evay~sYiy 119 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF-------------GTSVLAMQLMQFFYGLATAA-EVAYYSYIY 119 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-------------HCcHHHHHHHHHHHHHHHHH-HHHHHHHhe
Confidence 4445566777899999999999988877777666554 12222222222222222111 223346666
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh--hhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy10231 498 ELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL--LNMGGMMWAFSCACLLAMVFIQAFLPETQG 563 (607)
Q Consensus 498 e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (607)
...|++.--++.+......-+|..++..+.-.+... ..+.....+..+...++.++ .+++|..++
T Consensus 120 s~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~fLP~~~~ 186 (412)
T PF01770_consen 120 SVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-ALFLPMPKR 186 (412)
T ss_pred eecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHcCCCCc
Confidence 666777777888888888877777777666655542 23333333333333333333 445676544
No 277
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.60 E-value=0.79 Score=44.75 Aligned_cols=141 Identities=13% Similarity=-0.005 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhCCCc---chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCC
Q psy10231 390 VLYYAVNFFEDAGSSL---DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDD 466 (607)
Q Consensus 390 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (607)
.....+.+..+.+.+. ..........+...++.++.|.+.||.|||+.+..+.....++.+...+.. .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---------~ 91 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP---------N 91 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc---------c
Confidence 3344455555444332 245566666677777779999999999999777766654333333332210 0
Q ss_pred CCCChHHHHHHHHHHHHHHhccchhhhhhhccccCc-cchhhHHHHHHH-HHHHHHHHHhhhcHHHHHh--hhhHHHHH
Q psy10231 467 RPLNWIPLACILANVCASMLGMLQLPWVMIAELFPL-SVRGIMGGIVCS-LGYLFIFTTVKMYPDLMYL--LNMGGMMW 541 (607)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~-~~~~~~~i~~~i~~~l~~~--~g~~~~~~ 541 (607)
...+........ .........+....+..|.+|. +.|+...+.... ...++..+++.+.+.+... .+|+..+.
T Consensus 92 -~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T COG0477 92 -VGLALLLILRLL-QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFL 168 (338)
T ss_pred -chHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 011222222221 2222223446666888999987 668888888777 4667777777666555544 34554333
No 278
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.58 E-value=3.6 Score=42.93 Aligned_cols=126 Identities=10% Similarity=0.128 Sum_probs=88.0
Q ss_pred cccccccCCCccccc---CccchhHHHHHHHH-HhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhc--------
Q psy10231 45 ILIPQLQKPSSIISI---SSDDASWIASLGVI-STPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVS-------- 112 (607)
Q Consensus 45 ~~~p~l~~~~~~~~~---s~~~~~~i~s~~~l-~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a-------- 112 (607)
..+-.+++ .+-+ .+..+.++=+...+ +..+..++.+++.+++.|.+++-+-+..+...-+++++.
T Consensus 44 ~~lR~lKD---slvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~ 120 (509)
T COG3202 44 NLLRSLKD---SLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDIL 120 (509)
T ss_pred HHHHHhhh---heEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 33445555 5543 45567777777777 788889999999999999999998888888888888764
Q ss_pred -cc-----------------------hhHHHHHHHHHhhhhhhHhh--hHhHHhhccCCCccccccchhhHHHHHHHHHH
Q psy10231 113 -KG-----------------------FTLLCVGRFITGMAIGMSSA--CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 166 (607)
Q Consensus 113 -~~-----------------------~~~l~~~R~l~G~g~g~~~~--~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig 166 (607)
++ .|...+.-++.=+=...... -.....|.+..++-.|..++++.+.+++..++
T Consensus 121 hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~llls 200 (509)
T COG3202 121 HPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLS 200 (509)
T ss_pred CCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHH
Confidence 11 02222222222222223332 34556788888888999999999999999998
Q ss_pred HHHhhhh
Q psy10231 167 YSLGYIV 173 (607)
Q Consensus 167 ~~l~~~l 173 (607)
+.+..++
T Consensus 201 g~~~~~~ 207 (509)
T COG3202 201 GEVTSWL 207 (509)
T ss_pred HHHHHHH
Confidence 8888777
No 279
>KOG3626|consensus
Probab=95.40 E-value=0.13 Score=56.38 Aligned_cols=164 Identities=12% Similarity=-0.018 Sum_probs=100.5
Q ss_pred hCCCc-chHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhh--ccc---c-------C---
Q psy10231 401 AGSSL-DDYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYF--SEL---S-------M--- 464 (607)
Q Consensus 401 ~g~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~---~-------~--- 464 (607)
.+++. ..+++...+-++..+...+..+...|..|-+++-.+.++++++.++.++--+.. +.. . .
T Consensus 127 F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~ 206 (735)
T KOG3626|consen 127 FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSS 206 (735)
T ss_pred cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccc
Confidence 34433 355566666777788888888888888888888888899988888776531111 000 0 0
Q ss_pred ------------------CC---CCC---ChHHHHHHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHH
Q psy10231 465 ------------------DD---RPL---NWIPLACILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFI 520 (607)
Q Consensus 465 ------------------~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~ 520 (607)
+. ... .+..+++.-++.+.+.....++...|+-|...++......|+.+.+.-+|-
T Consensus 207 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGP 286 (735)
T KOG3626|consen 207 LSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGP 286 (735)
T ss_pred cchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhh
Confidence 00 011 122222222233333333456666899999999988999999999888887
Q ss_pred HHHhhhcHHHHHh------------------hh-hHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q psy10231 521 FTTVKMYPDLMYL------------------LN-MGGMMWAFSCACLLAMVFIQAFLPETQGKT 565 (607)
Q Consensus 521 ~i~~~i~~~l~~~------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (607)
++|-.+.+..... .| |..-|.+.+.+.++.++..+ ++|++.+++
T Consensus 287 aiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f-~fPk~lp~~ 349 (735)
T KOG3626|consen 287 AIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF-FFPKELPKS 349 (735)
T ss_pred HHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH-hCcccCccc
Confidence 7776666655431 12 33355566666666666644 457665554
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.81 E-value=2.6 Score=44.75 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=73.3
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCC------------C--------ChHHHHH
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRP------------L--------NWIPLAC 476 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~--------~~~~~~~ 476 (607)
..++...+..++++++++.++.............++++..+...+. .+.+. - .|....
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~-lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~sl- 148 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDI-LHPDAFADKLLAILPPGFKGFIAMFRNWTFSL- 148 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhh-cCCCHHHHHhhhhccchHHHHHHHHHHHHHHH-
Confidence 3455667788999999999988777766666666666654332221 11111 0 011111
Q ss_pred HHHHHHHHHhccch-hhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHH
Q psy10231 477 ILANVCASMLGMLQ-LPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMY 532 (607)
Q Consensus 477 ~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~ 532 (607)
..+..-..+....+ +-|.++.|.++.++..+-.++....++++..+++.+...+.+
T Consensus 149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222 457899999999999999999999999999999888877766
No 281
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.73 E-value=0.32 Score=50.13 Aligned_cols=118 Identities=8% Similarity=-0.173 Sum_probs=75.7
Q ss_pred hhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhccchhhhhhhccccCcc---chhhHHHHH
Q psy10231 436 ALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLGMLQLPWVMIAELFPLS---VRGIMGGIV 512 (607)
Q Consensus 436 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~ 512 (607)
+.+..+.++..++.+++.+....... ++........+.+.+ ...+..+.=|....+.+|.++++ .|.+.....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~---~~~~~~~~~~~gL~l-ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~f 77 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL---PSGIQLGLFYIGLAL-IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWF 77 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC---------CHHHHHHHH-HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh---hhhHHHHHHHHHHHH-HHhccccccccHHHHHHHHhcccchhhhhhhHHHH
Confidence 45667777788887775553332211 111122233333333 33333344466667888888765 467788889
Q ss_pred HHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHHHHHHHHhhhc
Q psy10231 513 CSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCACLLAMVFIQAF 557 (607)
Q Consensus 513 ~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 557 (607)
+...++|+.++..+.+++.++.||...|.+.++..+++.+..+..
T Consensus 78 Y~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 78 YWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998988888888777665443
No 282
>KOG0637|consensus
Probab=94.53 E-value=0.048 Score=55.65 Aligned_cols=157 Identities=10% Similarity=-0.000 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcc----cCCchhHH-HhhH
Q psy10231 370 KPFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQM----FSRRALAT-TSAF 443 (607)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~----~grr~~l~-~~~~ 443 (607)
+.++....+.+..++. ...-..|.+.++++.|.+.. .+......-+.+++..++.|..+|| +||||..+ .+..
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 3344444444444443 45667788888888888554 4555555667788889999999998 68776655 4445
Q ss_pred HHHHHHHHHhhhhhhhccccCCCCCCC--hHHHHHHHHH---HHHHHhccchhhhhhhccccCccchhh-HHHHHHHHHH
Q psy10231 444 FMALSMGISGTYEYYFSELSMDDRPLN--WIPLACILAN---VCASMLGMLQLPWVMIAELFPLSVRGI-MGGIVCSLGY 517 (607)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~~p~~~r~~-~~g~~~~~~~ 517 (607)
...+++++++...........+...+. ..+...++.+ -........| .=++..|+...+.+.+ +.+....+..
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp-~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGP-CRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhh-HHHHHHHhccChhhhhccchhHHHHHH
Confidence 555666655543222111111111111 1111111111 1111122223 3377888887777777 8888888888
Q ss_pred HHHHHHhhhcH
Q psy10231 518 LFIFTTVKMYP 528 (607)
Q Consensus 518 ~~~~i~~~i~~ 528 (607)
+|+.++-.+.+
T Consensus 190 vGnvLGY~~g~ 200 (498)
T KOG0637|consen 190 VGNVLGYALGS 200 (498)
T ss_pred hcceeeeeccc
Confidence 88877655443
No 283
>PRK03612 spermidine synthase; Provisional
Probab=92.74 E-value=4.8 Score=43.39 Aligned_cols=49 Identities=20% Similarity=0.100 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhcHHHHH-hhhhHHHHHHHHHHHHHHHHH
Q psy10231 505 RGIMGGIVCSLGYLFIFTTVKMYPDLMY-LLNMGGMMWAFSCACLLAMVF 553 (607)
Q Consensus 505 r~~~~g~~~~~~~~~~~i~~~i~~~l~~-~~g~~~~~~~~~~~~~~~~~~ 553 (607)
-+...|-.+.+..+|+++|+.+.+.++- ..|.....++.+.+.++.+++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3567788899999999999999887765 566655555555555544443
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.61 E-value=0.037 Score=55.30 Aligned_cols=38 Identities=11% Similarity=0.120 Sum_probs=2.2
Q ss_pred chhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhh
Q psy10231 489 LQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKM 526 (607)
Q Consensus 489 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i 526 (607)
.+..+.+.++..+++.|..+..+...+-.+|-.+|..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556778888888888888777777777766665543
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.51 E-value=0.25 Score=50.53 Aligned_cols=125 Identities=19% Similarity=0.212 Sum_probs=86.3
Q ss_pred ccccccccCCCcccccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHH--HH---HHHHHHhccchhHH
Q psy10231 44 SILIPQLQKPSSIISISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPF--II---GWTIITVSKGFTLL 118 (607)
Q Consensus 44 ~~~~p~l~~~~~~~~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~--~~---~~~~~a~a~~~~~l 118 (607)
..+.|.+.-.. ++.-..++..+....|.+|-.++.--...+ |+ |++.+.+.+-. .+ .....-+.+|.|..
T Consensus 264 qGv~~tl~fp~-~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~iv 338 (402)
T PF02487_consen 264 QGVAPTLLFPN-SFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIV 338 (402)
T ss_pred hchHHHhcCCc-cCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 44445444321 233345677788888887766653322111 33 44444333322 22 22222345889999
Q ss_pred HHHHHHHhhhhhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 119 CVGRFITGMAIGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 119 ~~~R~l~G~g~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
++.-+..|+..|..+. ....+.|-.++++|...++...++-++|..++..++-.+
T Consensus 339 f~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 339 FVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999888765
No 286
>KOG1479|consensus
Probab=92.26 E-value=15 Score=37.74 Aligned_cols=30 Identities=10% Similarity=0.013 Sum_probs=20.9
Q ss_pred chhHHHHHHHHHhhhhhhHhh-hHhHHhhcc
Q psy10231 114 GFTLLCVGRFITGMAIGMSSA-CYVYVAEIC 143 (607)
Q Consensus 114 ~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~ 143 (607)
.|...++.-++.|++.|.... .....+++-
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P 146 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLFP 146 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcCC
Confidence 366777778888888888877 555555443
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.23 E-value=2.2 Score=44.74 Aligned_cols=19 Identities=5% Similarity=-0.120 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhHhhcccCC
Q psy10231 416 GLRFFMAIIGSACIQMFSR 434 (607)
Q Consensus 416 ~~~~~~~~~~g~l~d~~gr 434 (607)
+.+++..+....+..|+..
T Consensus 56 v~~l~~~~~~~~~~~~i~~ 74 (437)
T TIGR00939 56 LPSLLFNSLNLFLIFRIPV 74 (437)
T ss_pred HHHHHHHHHHHHHhhccCc
Confidence 3344444455555566554
No 288
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.80 E-value=17 Score=38.13 Aligned_cols=116 Identities=9% Similarity=0.021 Sum_probs=74.5
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCC----------CC-C----------hHHHH
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDR----------PL-N----------WIPLA 475 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~----------~~~~~ 475 (607)
..++..++..+++++..+.++...-........+++++..+...+.. +.+ .+ . |....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~-hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~ 152 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDIL-HPDPEFSRDLFADLPMFLKWFILIVGEWSYSL 152 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCCHHHHHHHHhhCCccceeeeEeecchHHHH
Confidence 45677788889999999998887776666666777776655322211 111 01 1 22222
Q ss_pred HHHHHHHHHHhccchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhcHHHHHh
Q psy10231 476 CILANVCASMLGMLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYL 533 (607)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~ 533 (607)
.....-........-+-|..+.|....++..+-.++.+...+++..++..+..++.++
T Consensus 153 ~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 153 FYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2221111112222224567889999999999999999999999999988888777653
No 289
>KOG1479|consensus
Probab=91.18 E-value=4.6 Score=41.29 Aligned_cols=60 Identities=0% Similarity=-0.040 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcchHH----HHHHHHHHHHHHHHHHhHhhcc
Q psy10231 372 FFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDDYV----ASIIVAGLRFFMAIIGSACIQM 431 (607)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~g~l~d~ 431 (607)
....+++.........+.+.+-.+++.........+.. ......+..++..+.-.++..|
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444556666666666554322222222 2222333444445555555555
No 290
>KOG3098|consensus
Probab=89.22 E-value=5.7 Score=41.62 Aligned_cols=106 Identities=8% Similarity=-0.102 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhhhhhhhccccCCCCCCChHHHHHHHHHHHHHHhc
Q psy10231 408 YVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGTYEYYFSELSMDDRPLNWIPLACILANVCASMLG 487 (607)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (607)
+....+......+.+++++.+.|+++.|..+.++........+.+.. .+.+..++...+.+.+.+..
T Consensus 53 y~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-------------~N~y~~yfssallG~Gaall 119 (461)
T KOG3098|consen 53 YYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-------------PNSYYLYFSSALLGFGAALL 119 (461)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-------------cchHHHHHHHHHhhhhHHhe
Confidence 34466777788889999999999999999999888777666655433 34566666666667766665
Q ss_pred cchhhhhhhccccCccchhhHHHHHHHHHHHHHHHHhhhc
Q psy10231 488 MLQLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFTTVKMY 527 (607)
Q Consensus 488 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~i~ 527 (607)
+.... .+.+|...++.+.+-.++...+...+.++|..+.
T Consensus 120 w~GqG-~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 120 WTGQG-GYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred ecccc-eehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 54443 7889999999999999999999988887775443
No 291
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.15 E-value=3 Score=32.26 Aligned_cols=66 Identities=15% Similarity=-0.035 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHHHHHHHHHhh
Q psy10231 389 IVLYYAVNFFEDAGSSLD-DYVASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFMALSMGISGT 454 (607)
Q Consensus 389 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~~~~~~ 454 (607)
.+.-.+|...++.+.+.+ .+.......++.++|.+...++.++..+++.+..+.+...+..+.+++
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 344567778788777654 677888899999999999999999988888888888888888877766
No 292
>KOG1237|consensus
Probab=81.83 E-value=27 Score=38.13 Aligned_cols=149 Identities=9% Similarity=-0.046 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhcc-cCCchhHHHhhHHHHHHHHHHhhhhhhhcccc------CC----CCCCCh-HHH
Q psy10231 407 DYVASIIVAGLRFFMAIIGSACIQM-FSRRALATTSAFFMALSMGISGTYEYYFSELS------MD----DRPLNW-IPL 474 (607)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~l~d~-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~-~~~ 474 (607)
+......++.......+.+++++|- .||-+...++.++..+++.++......+.... .. ...... ..+
T Consensus 75 aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~ 154 (571)
T KOG1237|consen 75 AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAV 154 (571)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHH
Confidence 3444455555666777889999998 47888888888888887766665544443210 00 000111 111
Q ss_pred HHHHHHHH-HHHhccchhhhhhhccccCc----cch--hhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhHHHHHHHHHHH
Q psy10231 475 ACILANVC-ASMLGMLQLPWVMIAELFPL----SVR--GIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMGGMMWAFSCAC 547 (607)
Q Consensus 475 ~~~~~~~~-~~~~~~~~~~~~~~~e~~p~----~~r--~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~~~~~~~~~~~ 547 (607)
+...+... ....+.-|....+-+|-++. +.+ ..-+.......+.|..++..+..+..++.+|...|.+..+..
T Consensus 155 ~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~ 234 (571)
T KOG1237|consen 155 LYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLN 234 (571)
T ss_pred HHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHH
Confidence 11111111 12223344444666777762 222 356667777778888888888888888888888887777776
Q ss_pred HHHHHHhh
Q psy10231 548 LLAMVFIQ 555 (607)
Q Consensus 548 ~~~~~~~~ 555 (607)
.++.++..
T Consensus 235 ~lai~iF~ 242 (571)
T KOG1237|consen 235 ALAILIFL 242 (571)
T ss_pred HHHHHHHH
Confidence 66665543
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.66 E-value=10 Score=39.89 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=17.6
Q ss_pred HhHhhcccCCchhHHH-hhHHHHHHHHHHhh
Q psy10231 425 GSACIQMFSRRALATT-SAFFMALSMGISGT 454 (607)
Q Consensus 425 ~g~l~d~~grr~~l~~-~~~~~~~~~~~~~~ 454 (607)
=...+.|+||||..++ .-.+.++.++.++.
T Consensus 60 Ds~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~ 90 (544)
T PF13000_consen 60 DSVYSKRIGRRKSWIIPIQYLSGILMLYLSY 90 (544)
T ss_pred hhhcccccCCcchhhhHHHHHHHHHHHHHHh
Confidence 3445678999886554 33455555555444
No 294
>KOG3880|consensus
Probab=81.36 E-value=2.9 Score=40.79 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhc
Q psy10231 64 ASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEI 142 (607)
Q Consensus 64 ~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~ 142 (607)
.|.+.-+-.+-..+--+-...+.||+---.=..+..++.+.+.++.++++|.++=+.+-.+..++.|.--. -..+. ..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-cc
Confidence 44444455555556666667778876433334455667777888889999999999998888888887666 33332 22
Q ss_pred cCCCccccccchhhHHHHHHHHHHH
Q psy10231 143 CLPNDRGYLSAFGPVFVSLGVLIVY 167 (607)
Q Consensus 143 ~~~~~r~~~~~~~~~~~~lG~~ig~ 167 (607)
++ ....+.|..+.+...++|.
T Consensus 143 Y~----~~~i~~WSSGTGgAGliGa 163 (409)
T KOG3880|consen 143 YP----SIVIAGWSSGTGGAGLIGA 163 (409)
T ss_pred CC----CceeccccCCCCcchhhhh
Confidence 32 3344555555444444443
No 295
>KOG3574|consensus
Probab=76.48 E-value=84 Score=32.16 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCcch-H---HHHHHHHHHHHHHHHHHhHhhc-----ccCCchhHH-H
Q psy10231 371 PFFILIGFFLFQEASGMYIVLYYAVNFFEDAGSSLDD-Y---VASIIVAGLRFFMAIIGSACIQ-----MFSRRALAT-T 440 (607)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~---~~~~~~~~~~~~~~~~~g~l~d-----~~grr~~l~-~ 440 (607)
.+....++.. .|........ -.|.+++..+.+.+. . ...-.+++ -++...++| |+|||+..+ -
T Consensus 32 ~illLl~LYl-lQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sL-----KllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 32 SILLLLFLYL-LQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSL-----KLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hHHHHHHHHH-HcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHH-----HHHHHhhhHHHHHHhhccccceeee
Confidence 3444444443 3444444434 788888855554321 1 12222222 334555566 999987654 3
Q ss_pred hhHHHHHHHHHHhh
Q psy10231 441 SAFFMALSMGISGT 454 (607)
Q Consensus 441 ~~~~~~~~~~~~~~ 454 (607)
+..+.+..+..++.
T Consensus 105 ~q~llG~~mllLs~ 118 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSY 118 (510)
T ss_pred hHHHHHHHHHHHhh
Confidence 44444444444443
No 296
>KOG4332|consensus
Probab=74.93 E-value=9.7 Score=36.48 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=23.3
Q ss_pred HHHHHHHHHhHhhcccCCchhHHHhhHHHHHHH
Q psy10231 417 LRFFMAIIGSACIQMFSRRALATTSAFFMALSM 449 (607)
Q Consensus 417 ~~~~~~~~~g~l~d~~grr~~l~~~~~~~~~~~ 449 (607)
..++...+.|-+.||.|||+..+.-.+...+++
T Consensus 84 SsmLFGtivgSLaDkqGRKracvtycitYiLsC 116 (454)
T KOG4332|consen 84 SSMLFGTIVGSLADKQGRKRACVTYCITYILSC 116 (454)
T ss_pred hHHHHHHHHHHHHhhhccccceeeehHHHHHHH
Confidence 345566677889999999998766555555544
No 297
>KOG2601|consensus
Probab=72.89 E-value=52 Score=33.42 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccCCchhHHHhhHHH
Q psy10231 409 VASIIVAGLRFFMAIIGSACIQMFSRRALATTSAFFM 445 (607)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~l~d~~grr~~l~~~~~~~ 445 (607)
.....-+...++...+.|...|+..|+|.+.....+.
T Consensus 67 vyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lq 103 (503)
T KOG2601|consen 67 VYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQ 103 (503)
T ss_pred HHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhc
Confidence 3444445556666777788899999988776655443
No 298
>KOG3880|consensus
Probab=72.15 E-value=7.8 Score=37.93 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=82.2
Q ss_pred ccccC-ccchhHHHHHHHHHhhHhhhHHHHhhhhhcCch------hhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhh
Q psy10231 56 IISIS-SDDASWIASLGVISTPVGSLFAGIFMDLLGRKT------TVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMA 128 (607)
Q Consensus 56 ~~~~s-~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~------~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g 128 (607)
.+..+ +.|.-|....|.+|..+..- +-|+=|-+ .+..-.+++.+...+..+.++++..++.-+.-|+-
T Consensus 281 g~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLl 355 (409)
T KOG3880|consen 281 GFSLSKDSQYRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLL 355 (409)
T ss_pred CCccchhhcchhhheeeeeeEEEEec-----cceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhc
Confidence 44443 34577888888887655422 22222211 11222334455556667889999999999999999
Q ss_pred hhhHhh-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 129 IGMSSA-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 129 ~g~~~~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
.|..+. ..--+.+-.++++|-.+++....+-.+|..+++.++-.+
T Consensus 356 GGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 356 GGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred CchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 999999 999899999999999999999999999999988877554
No 299
>KOG3097|consensus
Probab=70.10 E-value=1.2e+02 Score=30.27 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=67.7
Q ss_pred HHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhhccCC--Cc
Q psy10231 71 GVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAEICLP--ND 147 (607)
Q Consensus 71 ~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e~~~~--~~ 147 (607)
..+..+.++.+.+.+..++|.|.++.++...+...-. .=+=+.+..++-+-.+.|+|.+..+. --+|++++... +.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 3445556666777999999999999888777665422 22346788999999999999999998 77787776542 33
Q ss_pred c---------ccccchhhHHHHHHHHHHHHHh
Q psy10231 148 R---------GYLSAFGPVFVSLGVLIVYSLG 170 (607)
Q Consensus 148 r---------~~~~~~~~~~~~lG~~ig~~l~ 170 (607)
| .+..+.+.+.+.-+..+|..++
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~is 177 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLIS 177 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHH
Confidence 4 3455555555555555544333
No 300
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=61.68 E-value=28 Score=35.82 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=6.1
Q ss_pred HHHHHHHhHhhccc
Q psy10231 419 FFMAIIGSACIQMF 432 (607)
Q Consensus 419 ~~~~~~~g~l~d~~ 432 (607)
++.....|++..|.
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 33344444544443
No 301
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=58.00 E-value=49 Score=31.75 Aligned_cols=26 Identities=12% Similarity=-0.234 Sum_probs=15.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhcH
Q psy10231 503 SVRGIMGGIVCSLGYLFIFTTVKMYP 528 (607)
Q Consensus 503 ~~r~~~~g~~~~~~~~~~~i~~~i~~ 528 (607)
-.|..+.|+...+.+....+.....+
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 45566666666666665555544443
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=54.24 E-value=50 Score=31.72 Aligned_cols=101 Identities=13% Similarity=0.199 Sum_probs=58.3
Q ss_pred hHHHHHHHHHhhHhhhHHHHhhhh-hcCchhhh----hhhhHHHHHHHHHHh-c----cchhHHHHHHHHHhhhhhhHhh
Q psy10231 65 SWIASLGVISTPVGSLFAGIFMDL-LGRKTTVQ----LTAIPFIIGWTIITV-S----KGFTLLCVGRFITGMAIGMSSA 134 (607)
Q Consensus 65 ~~i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~----~~~~l~~~~~~~~a~-a----~~~~~l~~~R~l~G~g~g~~~~ 134 (607)
....-.+..|..+|.+..|+.... +-||+-+. .+++++.++.+..+. . .++..+++.-|+.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334445666777777777888774 45555443 334444444444211 2 1366788888888887755555
Q ss_pred hHhHHhhccCCCccccccchhhHHHHHHHHH
Q psy10231 135 CYVYVAEICLPNDRGYLSAFGPVFVSLGVLI 165 (607)
Q Consensus 135 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~i 165 (607)
..-.+-.-++..++.+..-.++..+++|.++
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3333333344445555666667777777665
No 303
>KOG2881|consensus
Probab=54.13 E-value=55 Score=31.08 Aligned_cols=25 Identities=12% Similarity=0.111 Sum_probs=16.0
Q ss_pred HHhHhhcccCCchhHHHhhHHHHHH
Q psy10231 424 IGSACIQMFSRRALATTSAFFMALS 448 (607)
Q Consensus 424 ~~g~l~d~~grr~~l~~~~~~~~~~ 448 (607)
-+-+++.|+..|.+.+.+.+++.+.
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHHH
Confidence 3344678888887777666555443
No 304
>COG4769 Predicted membrane protein [Function unknown]
Probab=53.79 E-value=24 Score=30.80 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=39.3
Q ss_pred HHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhh
Q psy10231 71 GVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMA 128 (607)
Q Consensus 71 ~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g 128 (607)
+.+..++.+...-++..++|+|.+-++|.. ...++.+|+.++++++++.|-.
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcc
Confidence 344555666777788899999988666654 3446789999999999998843
No 305
>KOG2601|consensus
Probab=52.28 E-value=89 Score=31.84 Aligned_cols=32 Identities=22% Similarity=0.178 Sum_probs=26.4
Q ss_pred hhhccccCccchhhHHHHHHHHHHHHHHHHhh
Q psy10231 494 VMIAELFPLSVRGIMGGIVCSLGYLFIFTTVK 525 (607)
Q Consensus 494 ~~~~e~~p~~~r~~~~g~~~~~~~~~~~i~~~ 525 (607)
-+..|..|++.|..+.|..|.........--.
T Consensus 409 qimQe~VpEseR~vv~gvqnsL~~~ldll~~i 440 (503)
T KOG2601|consen 409 QIMQETVPESERCVVFGVQNSLNSALDLLKDI 440 (503)
T ss_pred HHHHHhcchhhhhhhHhHHHHHHHHHHHHHHh
Confidence 56789999999999999999999876665433
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.82 E-value=51 Score=26.53 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=25.0
Q ss_pred cchhHHHHHHHHHhhHhhhHHHHhhhhh-cCchhhh
Q psy10231 62 DDASWIASLGVISTPVGSLFAGIFMDLL-GRKTTVQ 96 (607)
Q Consensus 62 ~~~~~i~s~~~l~~~i~~~~~g~l~Dr~-Grr~~l~ 96 (607)
.+.+.-.++=+++..+.....|++.||| |-++..+
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 3445556777888888888999999997 5454433
No 307
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=43.74 E-value=8.7 Score=38.32 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=2.9
Q ss_pred HHHHHHHHhhHhhhHHHHhhhh-hcCchhhhhhh--hHHHHHHHHHH----------hccchhHHHHHHHHHhhhhhhHh
Q psy10231 67 IASLGVISTPVGSLFAGIFMDL-LGRKTTVQLTA--IPFIIGWTIIT----------VSKGFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 67 i~s~~~l~~~i~~~~~g~l~Dr-~Grr~~l~~~~--~l~~~~~~~~a----------~a~~~~~l~~~R~l~G~g~g~~~ 133 (607)
....|.++-.+|..+.++.--+ -.+|++...+. +++.-.-++|. .-+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556778888888777653211 13444443321 22222223331 23456778888999999999999
Q ss_pred h-hHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhh
Q psy10231 134 A-CYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGY 171 (607)
Q Consensus 134 ~-~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~ 171 (607)
+ +..+..+..++++|..+..+......+|..+|..++.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999988888888888877654
No 308
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=43.47 E-value=2.7e+02 Score=25.69 Aligned_cols=27 Identities=7% Similarity=-0.138 Sum_probs=14.5
Q ss_pred ccchhhHHHHHHHHHHHHHhhhhhHHH
Q psy10231 151 LSAFGPVFVSLGVLIVYSLGYIVTWQY 177 (607)
Q Consensus 151 ~~~~~~~~~~lG~~ig~~l~~~l~Wr~ 177 (607)
.....-.++.+|.++|..+...++.+.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 344445555566666665555556433
No 309
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.20 E-value=69 Score=27.91 Aligned_cols=33 Identities=6% Similarity=-0.077 Sum_probs=22.1
Q ss_pred hhhhhhhccccCccchhhHHHHHHHHHHHHHHH
Q psy10231 490 QLPWVMIAELFPLSVRGIMGGIVCSLGYLFIFT 522 (607)
Q Consensus 490 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~~~~i 522 (607)
.+.|-+.+-.-.++..|+..|+-.+-.+++...
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345555555556666799999888877776544
No 310
>KOG3810|consensus
Probab=40.99 E-value=82 Score=31.79 Aligned_cols=93 Identities=9% Similarity=0.018 Sum_probs=71.8
Q ss_pred hHHHHHHHHHhhHhhhHHHHhhhhhcCc--hhhhhhhhHHHHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHHhh
Q psy10231 65 SWIASLGVISTPVGSLFAGIFMDLLGRK--TTVQLTAIPFIIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYVAE 141 (607)
Q Consensus 65 ~~i~s~~~l~~~i~~~~~g~l~Dr~Grr--~~l~~~~~l~~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i~e 141 (607)
|..-++..+..+++.+..|.+--++.|. ..+.++.+..+...++++-+++.|...++-++.+.-.....+ +..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 5666777888889999999999888776 344556666777777888888988888887777777777777 7777778
Q ss_pred ccCCCccccccchhhH
Q psy10231 142 ICLPNDRGYLSAFGPV 157 (607)
Q Consensus 142 ~~~~~~r~~~~~~~~~ 157 (607)
....+.-|..+|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 7777887888887753
No 311
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=39.09 E-value=3e+02 Score=27.01 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=44.7
Q ss_pred HHHHHHHHhccchhHHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 103 IIGWTIITVSKGFTLLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 103 ~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
...+++..+.++.. --..|.+.|+-.=...|+++++.-.+|++++--..--.....+++.++.+++|-.+
T Consensus 8 ~~~~~~~~~~~~~~-~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 8 VLLALLAILVPDLN-IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred HHHHHHHHHhhhcc-hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444433 56789999988877777999999999966653333333445555556666666666
No 312
>KOG4255|consensus
Probab=35.43 E-value=4.8e+02 Score=26.24 Aligned_cols=18 Identities=6% Similarity=-0.073 Sum_probs=9.1
Q ss_pred hhhHHHHHHHHHHHHHHh
Q psy10231 384 ASGMYIVLYYAVNFFEDA 401 (607)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~ 401 (607)
+.+.+..-.-.|...++.
T Consensus 24 wa~vn~~wv~lp~lv~el 41 (439)
T KOG4255|consen 24 WAGVNGLWVELPLLVKEL 41 (439)
T ss_pred HhhhcceeeehhHHHhhc
Confidence 334444444456666654
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.95 E-value=1.8e+02 Score=25.37 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=36.1
Q ss_pred cchhHHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHH
Q psy10231 113 KGFTLLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIV 166 (607)
Q Consensus 113 ~~~~~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig 166 (607)
+++..+++.-++.|+|.-++ .+.+++-.+.+++.|..+|+-.+--+++-+.-
T Consensus 95 P~~~~~~~S~~~Fg~gllGi--sYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGI--SYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHHHHhh--hhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 44555555555555553222 56778888899999999999988888876653
No 314
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=33.01 E-value=2.6e+02 Score=30.22 Aligned_cols=26 Identities=19% Similarity=0.269 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhcccCCc
Q psy10231 410 ASIIVAGLRFFMAIIGSACIQMFSRR 435 (607)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~l~d~~grr 435 (607)
....+.+.+.++...++++-..++.|
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 34455566667777777766666543
No 315
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=31.87 E-value=75 Score=31.93 Aligned_cols=113 Identities=15% Similarity=0.044 Sum_probs=68.6
Q ss_pred ccCccchhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHHHH-----HHHHHHhc----cchhHHHHHHHHHhhh
Q psy10231 58 SISSDDASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPFII-----GWTIITVS----KGFTLLCVGRFITGMA 128 (607)
Q Consensus 58 ~~s~~~~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~~~-----~~~~~a~a----~~~~~l~~~R~l~G~g 128 (607)
|-.--|.+.+++.|..++.+|+...-++.|.--.-+.+.+-.++..+ ..+-..|+ ++-+.+.+.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 44667899999999999999999998888854333222222222211 11122333 4567888889999999
Q ss_pred hhhHhh-hHhHHhh-ccCCCccccccchhhHHHHHHHHHHHHHhhhh
Q psy10231 129 IGMSSA-CYVYVAE-ICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV 173 (607)
Q Consensus 129 ~g~~~~-~~~~i~e-~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l 173 (607)
.|...| .+.++.. ....+.-+. ..-..-.+|.+.++++-.++
T Consensus 119 VG~EiPL~mrml~~r~a~~k~~~s---~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 119 VGAEIPLLMRMLQRRQAKAKDLGS---RVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HhcchHHHHHHHHHHHHHHHhhhh---hhhhhHhhhhhhHHHHHHHH
Confidence 999999 8777766 222222221 11112555665555544433
No 316
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.05 E-value=2.2e+02 Score=34.20 Aligned_cols=19 Identities=11% Similarity=-0.067 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhHhhcccC
Q psy10231 415 AGLRFFMAIIGSACIQMFS 433 (607)
Q Consensus 415 ~~~~~~~~~~~g~l~d~~g 433 (607)
..++.+|..+...+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3445555555555554455
No 317
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=30.02 E-value=5.9e+02 Score=25.67 Aligned_cols=20 Identities=15% Similarity=0.095 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhHhhcccCC
Q psy10231 415 AGLRFFMAIIGSACIQMFSR 434 (607)
Q Consensus 415 ~~~~~~~~~~~g~l~d~~gr 434 (607)
+....+....-=++.++.++
T Consensus 177 a~lya~~nV~~E~~v~~~~~ 196 (334)
T PF06027_consen 177 AILYAVSNVLEEKLVKKAPR 196 (334)
T ss_pred HHHHHHHHHHHHHhcccCCH
Confidence 33344444555555555544
No 318
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=25.94 E-value=77 Score=26.29 Aligned_cols=31 Identities=13% Similarity=-0.018 Sum_probs=14.1
Q ss_pred HhhhccccCChHHHHHhCChHHHHHHHHHHh
Q psy10231 300 FAAMHAVPETPSWLARQGCTKEARNSLVWFR 330 (607)
Q Consensus 300 ~~~~~~~~esp~~l~~~~~~~~~~~~l~~~~ 330 (607)
++.++.+|+.|.....++..+.++..+++++
T Consensus 57 i~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 57 IILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 3445667777643222222333444444443
No 319
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=24.36 E-value=1.3e+02 Score=24.36 Aligned_cols=39 Identities=13% Similarity=-0.067 Sum_probs=27.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhhhcccCCCCCCH
Q psy10231 528 PDLMYLLNMGGMMWAFSCACLLAMVFIQAFLPETQGKTL 566 (607)
Q Consensus 528 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (607)
|...+..+|..++++...++++.+.+.+.+.|++.-++-
T Consensus 51 G~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~W 89 (105)
T PF10183_consen 51 GEKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQTW 89 (105)
T ss_pred CCcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 345567788888877666666666666778898876543
No 320
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=23.91 E-value=6.5e+02 Score=24.12 Aligned_cols=78 Identities=17% Similarity=0.121 Sum_probs=39.4
Q ss_pred hccchhHHHHHHHHHhhhhhhHhhhHhHHhhccCCCccccccchhhHHHHHHHHHHHHHhhhh------hHHHHHHHhHH
Q psy10231 111 VSKGFTLLCVGRFITGMAIGMSSACYVYVAEICLPNDRGYLSAFGPVFVSLGVLIVYSLGYIV------TWQYTSAACAV 184 (607)
Q Consensus 111 ~a~~~~~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ig~~l~~~l------~Wr~~f~~~~~ 184 (607)
++.|...++.+-+..|+-..... ..-.+....| +|+....+...++++|..+-..+-..+ .|.++++...+
T Consensus 30 LS~s~~FyY~sg~~lGv~~s~li-~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~~~nl~~il~~~~~~v~~yv~~ 106 (249)
T PF10225_consen 30 LSRSVLFYYSSGISLGVLASLLI-LLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQLWENLQSILEEYRIYVLGYVLV 106 (249)
T ss_pred hccChhHHHhhhHHHHHHHHHHH-HHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666555555555554321111 3444567777 555555555555566655444444333 35555555555
Q ss_pred HHHHHHH
Q psy10231 185 VALVGFA 191 (607)
Q Consensus 185 ~~~~~~~ 191 (607)
.+++-..
T Consensus 107 ~G~vsf~ 113 (249)
T PF10225_consen 107 VGLVSFA 113 (249)
T ss_pred HHHHHHH
Confidence 5554433
No 321
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.58 E-value=1.8e+02 Score=20.99 Aligned_cols=37 Identities=14% Similarity=0.177 Sum_probs=26.3
Q ss_pred cchhHHHHHHHHHhhhhhhHhhhHhHHhhccCCCccc
Q psy10231 113 KGFTLLCVGRFITGMAIGMSSACYVYVAEICLPNDRG 149 (607)
Q Consensus 113 ~~~~~l~~~R~l~G~g~g~~~~~~~~i~e~~~~~~r~ 149 (607)
-|+..+...-...+++.+.......+++|..+++++|
T Consensus 26 i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 26 INITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4556666666666777777766888899998885554
No 322
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=22.54 E-value=2.7e+02 Score=24.20 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=21.8
Q ss_pred HHHHHHhhHhhhHHHHhhhhhcCch
Q psy10231 69 SLGVISTPVGSLFAGIFMDLLGRKT 93 (607)
Q Consensus 69 s~~~l~~~i~~~~~g~l~Dr~Grr~ 93 (607)
.-|.+|..+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4688899999999999999998874
No 323
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=22.37 E-value=8e+02 Score=27.72 Aligned_cols=54 Identities=26% Similarity=0.265 Sum_probs=35.5
Q ss_pred hHHHHhhhh----hcCchhhhhhhhHHHHHHHHHHhcc-chhHHHHHHHHHhhhhhhHh
Q psy10231 80 LFAGIFMDL----LGRKTTVQLTAIPFIIGWTIITVSK-GFTLLCVGRFITGMAIGMSS 133 (607)
Q Consensus 80 ~~~g~l~Dr----~Grr~~l~~~~~l~~~~~~~~a~a~-~~~~l~~~R~l~G~g~g~~~ 133 (607)
.+.+-++|. -||.+-++++.+++.++++...+.. ..+.+..+-++.+++.++..
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlg 99 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLG 99 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 444566663 4677778888888888888877664 45555555666666655443
No 324
>PF15050 SCIMP: SCIMP protein
Probab=22.10 E-value=1.4e+02 Score=24.48 Aligned_cols=13 Identities=23% Similarity=0.325 Sum_probs=8.4
Q ss_pred HHHHHHHhHHHHH
Q psy10231 175 WQYTSAACAVVAL 187 (607)
Q Consensus 175 Wr~~f~~~~~~~~ 187 (607)
||--||+..++++
T Consensus 4 Wr~nFWiiLAVaI 16 (133)
T PF15050_consen 4 WRDNFWIILAVAI 16 (133)
T ss_pred HHhchHHHHHHHH
Confidence 6777777665553
No 325
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=22.08 E-value=2.2e+02 Score=25.80 Aligned_cols=25 Identities=8% Similarity=0.272 Sum_probs=21.4
Q ss_pred HHHHHHhhHhhhHHHHhhhhhcCch
Q psy10231 69 SLGVISTPVGSLFAGIFMDLLGRKT 93 (607)
Q Consensus 69 s~~~l~~~i~~~~~g~l~Dr~Grr~ 93 (607)
.-|.+++.+++.+.|++.||.-+|+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~~~ 113 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRKRN 113 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccc
Confidence 5688899999999999999998633
No 326
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=21.64 E-value=7.1e+02 Score=23.72 Aligned_cols=20 Identities=15% Similarity=0.095 Sum_probs=8.9
Q ss_pred ccchhhHHHHHHHHHHHHHh
Q psy10231 151 LSAFGPVFVSLGVLIVYSLG 170 (607)
Q Consensus 151 ~~~~~~~~~~lG~~ig~~l~ 170 (607)
.....-.+..+|.++|...+
T Consensus 11 ~~~~illg~~iGg~~G~~~~ 30 (248)
T PF11368_consen 11 FLLLILLGGLIGGFIGFFIG 30 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444445555444433
No 327
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.95 E-value=2e+02 Score=23.32 Aligned_cols=36 Identities=11% Similarity=-0.075 Sum_probs=28.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhcHHHHHhhhhH
Q psy10231 502 LSVRGIMGGIVCSLGYLFIFTTVKMYPDLMYLLNMG 537 (607)
Q Consensus 502 ~~~r~~~~g~~~~~~~~~~~i~~~i~~~l~~~~g~~ 537 (607)
++.++.+.++-...-.+++.+.....|++.+++-..
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 456677888888888888888889999999986433
No 328
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=20.87 E-value=7e+02 Score=25.22 Aligned_cols=115 Identities=11% Similarity=0.032 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHhhHhhhHHHHhhhhhcCchhhhhhhhHH---HHHHHHHHhccchhHHHHHHHHHhhhhhhHhh-hHhHH
Q psy10231 64 ASWIASLGVISTPVGSLFAGIFMDLLGRKTTVQLTAIPF---IIGWTIITVSKGFTLLCVGRFITGMAIGMSSA-CYVYV 139 (607)
Q Consensus 64 ~~~i~s~~~l~~~i~~~~~g~l~Dr~Grr~~l~~~~~l~---~~~~~~~a~a~~~~~l~~~R~l~G~g~g~~~~-~~~~i 139 (607)
.|....+..++..+ .++.+++.+.+|--+.+..+.++. +.-.+...+++|......+-.+.|.-.|.... .....
T Consensus 49 ~GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 34444445555544 577788999999999998877773 45567777888988888888888888887777 66666
Q ss_pred hhccCCCcc-ccccchhh--HHHHHHHHHHHHHhhhhhHHHHHH
Q psy10231 140 AEICLPNDR-GYLSAFGP--VFVSLGVLIVYSLGYIVTWQYTSA 180 (607)
Q Consensus 140 ~e~~~~~~r-~~~~~~~~--~~~~lG~~ig~~l~~~l~Wr~~f~ 180 (607)
-...++++| -.+.++.. ....+|.+++..+.+ +++...+.
T Consensus 128 Lgii~k~D~~y~a~Gil~GiitIPiG~~vggl~~g-~~~~~il~ 170 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGILAGIITIPIGCFVGGLIAG-FDIGMILI 170 (354)
T ss_pred hhhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHHh-CCHHHHHH
Confidence 666666655 23333332 223455555555443 24444443
No 329
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=20.02 E-value=9.4e+02 Score=24.56 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHH-hhhhHHHHHHHHHHHHHHH
Q psy10231 510 GIVCSLGYLFIFTTVKMYPDLMY-LLNMGGMMWAFSCACLLAM 551 (607)
Q Consensus 510 g~~~~~~~~~~~i~~~i~~~l~~-~~g~~~~~~~~~~~~~~~~ 551 (607)
+.....-++|+..+....+++.- ..|.--.-...+.+.++++
T Consensus 142 s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 142 SRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred hhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 33444467787777777776543 2333223333344444444
Done!