Query psy10234
Match_columns 167
No_of_seqs 136 out of 1127
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 21:19:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10234.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10234hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tj7_A Argininosuccinate lyase 99.9 3.4E-27 1.2E-31 211.2 13.2 140 12-151 1-151 (457)
2 2e9f_A Argininosuccinate lyase 99.9 5E-26 1.7E-30 203.9 12.0 140 10-149 1-150 (462)
3 1k7w_A Delta 2 crystallin; eye 99.9 5.5E-25 1.9E-29 197.4 14.0 145 7-151 3-157 (468)
4 1fur_A Fumarase C, FUMC; hydro 99.8 1.3E-19 4.3E-24 162.8 8.0 137 11-151 18-183 (467)
5 1vdk_A Fumarase C, fumarate hy 99.8 7.2E-19 2.5E-23 157.7 8.7 136 12-151 18-183 (466)
6 1yfm_A Fumarase, YFUM; lyase, 99.7 5.1E-18 1.7E-22 153.3 7.6 135 13-151 44-208 (488)
7 1jsw_A L-aspartase, L-aspartat 99.7 4.3E-18 1.5E-22 153.1 6.9 135 13-151 21-186 (478)
8 2qga_B Adenylosuccinate lyase; 99.7 1E-18 3.5E-23 156.5 2.0 132 13-151 9-165 (465)
9 3bhg_A Adenylosuccinate lyase; 99.7 9.9E-18 3.4E-22 149.9 7.2 132 13-151 13-169 (459)
10 1q5n_A 3-carboxy-CIS,CIS-mucon 99.7 6.4E-17 2.2E-21 144.3 7.4 132 12-151 5-152 (454)
11 3c8t_A Fumarate lyase; structu 99.6 1.4E-15 4.8E-20 135.7 12.8 129 12-151 5-146 (451)
12 4adm_A Fumarase C, fumarate hy 99.6 3.8E-16 1.3E-20 141.3 8.5 133 13-151 48-204 (495)
13 2ptr_A Adenylosuccinate lyase; 99.6 4.2E-16 1.4E-20 139.5 6.1 130 13-151 10-166 (462)
14 1c3c_A Protein (adenylosuccina 99.5 1.7E-14 5.7E-19 127.9 10.7 107 37-151 15-135 (429)
15 2pfm_A Adenylosuccinate lyase; 99.5 2.3E-14 7.7E-19 127.7 10.0 111 33-151 21-147 (444)
16 1dof_A Adenylosuccinate lyase; 99.5 9.3E-15 3.2E-19 128.8 6.2 121 14-151 5-138 (403)
17 1re5_A 3-carboxy-CIS,CIS-mucon 99.5 1.1E-13 3.9E-18 123.2 10.4 108 36-151 20-148 (450)
18 3r6q_A Aspartase; aspartate am 99.5 1.5E-13 5.3E-18 123.4 9.8 128 24-151 28-183 (468)
19 1yis_A Adenylosuccinate lyase; 99.4 1.5E-13 5.2E-18 123.3 6.3 130 13-151 9-150 (478)
20 2fel_A 3-carboxy-CIS,CIS-mucon 99.4 6.6E-13 2.2E-17 115.6 8.3 129 12-151 8-150 (359)
21 3ocf_A Fumarate lyase:delta cr 99.4 2.2E-12 7.7E-17 116.3 10.5 126 26-151 48-203 (478)
22 4eei_A Adenylosuccinate lyase; 99.4 1.9E-12 6.6E-17 115.3 9.3 106 37-151 16-136 (438)
23 2j91_A Adenylosuccinate lyase; 99.3 1.2E-12 4E-17 118.5 4.5 128 14-151 38-176 (503)
24 3e04_A Fumarase, fumarate hydr 99.1 1.9E-10 6.5E-15 104.1 9.4 125 26-151 55-210 (490)
25 3gtd_A Fumarase C, fumarate hy 99.0 6.5E-10 2.2E-14 100.4 9.7 126 26-151 50-204 (482)
26 4hgv_A Fumarase C, fumarate hy 98.2 8.1E-06 2.8E-10 73.8 11.2 126 26-151 61-215 (495)
27 3exm_A Phosphatase SC4828; nuc 60.2 9.1 0.00031 31.3 4.2 38 56-93 175-212 (237)
28 2odm_A YLAN, UPF0358 protein M 56.1 23 0.00079 25.0 5.1 38 36-78 45-82 (91)
29 2gbo_A UPF0358 protein EF2458; 50.5 30 0.001 24.9 5.1 37 36-77 47-83 (104)
30 3t98_B Nucleoporin NUP58/NUP45 32.2 51 0.0018 23.0 3.8 74 21-101 4-77 (93)
31 3fxd_A Protein ICMQ; helix bun 32.0 45 0.0015 21.5 3.2 20 60-79 4-23 (57)
32 3anw_B GINS23, putative unchar 21.3 1.3E+02 0.0043 23.3 4.6 53 52-105 39-92 (171)
33 1w85_A Pyruvate dehydrogenase 21.3 63 0.0022 27.4 3.2 29 50-78 298-326 (368)
34 1umd_A E1-alpha, 2-OXO acid de 20.5 58 0.002 27.4 2.8 27 51-77 300-326 (367)
No 1
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=99.94 E-value=3.4e-27 Score=211.22 Aligned_cols=140 Identities=26% Similarity=0.398 Sum_probs=129.2
Q ss_pred hhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccC-CC
Q psy10234 12 MKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELK-TE 90 (167)
Q Consensus 12 ~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~-~~ 90 (167)
|++|+|||++.+++.++.|+.|+.||++|+++||.+++||+.|+.+.|+||++++++|.+++++|..+...+.|+++ +.
T Consensus 1 ~~~~~gr~~~~~~~~~~~f~~s~~~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~ 80 (457)
T 1tj7_A 1 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESD 80 (457)
T ss_dssp --CCCTTCSSCCCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGSC
T ss_pred CcccccccccchHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999888788888887 78
Q ss_pred CchhHHHHHHHHHHhhchhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 91 LEDIHMNIESELIKRIEFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 91 ~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
.+|+|+++|.+|++++|+.|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 81 ~~dv~~~v~~~l~e~~g~~g~~vH~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~ 151 (457)
T 1tj7_A 81 AEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVM 151 (457)
T ss_dssp CSSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEE
T ss_pred CCcHHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCee
Confidence 9999999999999999999999999999975 578988877766 778999999999998866
No 2
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=99.93 E-value=5e-26 Score=203.90 Aligned_cols=140 Identities=29% Similarity=0.480 Sum_probs=120.1
Q ss_pred hhhhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC
Q psy10234 10 MNMKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT 89 (167)
Q Consensus 10 ~~~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~ 89 (167)
|..++|+|||++.++..++.|+.|+.||.+++++|+.+++||+.|+.+.|+||++++++|.+++++|..+...+.|++++
T Consensus 1 m~~~~~g~r~~~~t~~~~~~f~~s~~~d~~l~~~~i~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~ 80 (462)
T 2e9f_A 1 MAHRTWGGRFGEGPDALAARFNASLAFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKGLDRIEEEIEAGTFPWRE 80 (462)
T ss_dssp -------------CCSHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCSCCCG
T ss_pred CCccccCCccchhhHHHHHhccCCCccCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcccCCcCC
Confidence 44589999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred CCchhHHHHHHHHHHhhchhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Q psy10234 90 ELEDIHMNIESELIKRIEFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMS 149 (167)
Q Consensus 90 ~~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~ 149 (167)
..+|+|+++|.++++++|+.|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|
T Consensus 81 ~~~dv~~~~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~ 150 (462)
T 2e9f_A 81 ELEDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLYLRGAIDELLALLLALRRVLVREAEKHLDP 150 (462)
T ss_dssp GGCSHHHHHHHHHHHHHCTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCchHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 99999999999999999999999999999975 578988877766 7889999999999999
No 3
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=99.92 E-value=5.5e-25 Score=197.40 Aligned_cols=145 Identities=26% Similarity=0.324 Sum_probs=121.3
Q ss_pred hhhhhhhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccc
Q psy10234 7 TETMNMKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIE 86 (167)
Q Consensus 7 ~~~~~~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~ 86 (167)
++.-++++|+|||+++++..++.|+.|+.||..++++++.+++||+.|+.+.|+||++++++|.+++++|..+...+.|+
T Consensus 3 ~~~~~~~~~~~r~~~~~~~~~~~f~~s~~~d~~~~~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~ 82 (468)
T 1k7w_A 3 SEARGDKLWGGRFSGSTDPIMEKLNSSIAYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWSKGVFV 82 (468)
T ss_dssp ----------------CCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCcccccccccchhHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhcccCc
Confidence 34445589999999999999999999999999999999999999999999999999999999999999999888889999
Q ss_pred cCCCCchhHHHHHHHHHHhhchhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 87 LKTELEDIHMNIESELIKRIEFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 87 ~~~~~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
+++..+|+|+++|.+|++++|+.|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 83 ~~~~~~dv~m~~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~l~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~~ 157 (468)
T 1k7w_A 83 VKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLFMKNSLSIISTHLLQLIKTLVERAAIEIDVIL 157 (468)
T ss_dssp CCTTCCSHHHHHHHHHHHHHCGGGGGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cCCCCCchHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEe
Confidence 99999999999999999999999999999999975 579988877776 778999999999998866
No 4
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=99.79 E-value=1.3e-19 Score=162.76 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=121.6
Q ss_pred hhhhhcccCCcchhHHHHHHhhCHHH-HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC
Q psy10234 11 NMKLWKGCFKENLNKFVEQFTESITV-DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT 89 (167)
Q Consensus 11 ~~kLW~gR~~~~~~~~~~~f~~s~~~-D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~ 89 (167)
..++|++ .++..+++|+.|..+ |..++.+++.+++||+.|+.+.|+||++++++|.+++++|.+....+.|++++
T Consensus 18 ~~~~~g~----~t~r~~~~f~~s~~~~~~~~i~a~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~~ 93 (467)
T 1fur_A 18 ADKLWGA----QTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAI 93 (467)
T ss_dssp TTCCCCH----HHHHHHHHCCCSSCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCBS
T ss_pred cccccch----hhHHHHHhccCCCccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhccccccccchh
Confidence 4479997 678889999998888 99999999999999999999999999999999999999999876667788776
Q ss_pred ----CCchhHHHHHHHH----HHhhc-hhhhh--hh------hhhhhhh-------HHHHHHHHH-HHH---HHHHHHHH
Q psy10234 90 ----ELEDIHMNIESEL----IKRIE-FQYYF--LL------LQYSELS-------IELKTELED-IHM---NIESELIK 141 (167)
Q Consensus 90 ----~~EDiH~~iE~~L----~e~iG-~~gg~--lH------tGRSR~r-------l~lRd~l~~-i~~---~l~~~l~~ 141 (167)
..+|+|+++|..+ ++++| +.|++ +| +|||||| |++|+.+.. +.. .|.+.|.+
T Consensus 94 ~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~l~~~l~~L~~~L~~ 173 (467)
T 1fur_A 94 WQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNE 173 (467)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999977 89999 78888 99 9999975 579988877 665 88999999
Q ss_pred HHHHHHHhhh
Q psy10234 142 RIESRVMSRM 151 (167)
Q Consensus 142 ~~e~~~~~~~ 151 (167)
++++|.+|-|
T Consensus 174 ~A~~~~~~~~ 183 (467)
T 1fur_A 174 KSRAFADIVK 183 (467)
T ss_dssp HHHHTTTCEE
T ss_pred HHHHhcCcEe
Confidence 9999998865
No 5
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=99.76 E-value=7.2e-19 Score=157.75 Aligned_cols=136 Identities=11% Similarity=0.055 Sum_probs=121.0
Q ss_pred hhhhcccCCcchhHHHHHHhhCHH-H--HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccC
Q psy10234 12 MKLWKGCFKENLNKFVEQFTESIT-V--DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELK 88 (167)
Q Consensus 12 ~kLW~gR~~~~~~~~~~~f~~s~~-~--D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~ 88 (167)
.++|++ .++..+++|+.|.. + |..++.+++.+.+||+.|+.+.|+||++++++|.+++++|.+....+.|+++
T Consensus 18 ~~~~g~----~t~~~~~~f~~s~~~~~~~~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~~ 93 (466)
T 1vdk_A 18 DKYWGA----QTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVVQGKWDDHFPLV 93 (466)
T ss_dssp TCCCCH----HHHHHHHHCCSSTTTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCB
T ss_pred ccccch----hhHHHHHhccCCCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhcccccCCCch
Confidence 469987 67889999998866 6 8999999999999999999999999999999999999999987667778888
Q ss_pred C----CCchhHHHHHHHH----HHhhc-hhh-hhhh------hhhhhhh-------HHHHHHHH-HHHH---HHHHHHHH
Q psy10234 89 T----ELEDIHMNIESEL----IKRIE-FQY-YFLL------LQYSELS-------IELKTELE-DIHM---NIESELIK 141 (167)
Q Consensus 89 ~----~~EDiH~~iE~~L----~e~iG-~~g-g~lH------tGRSR~r-------l~lRd~l~-~i~~---~l~~~l~~ 141 (167)
+ ..+|+|+++|..+ ++.+| +.| +++| +|||||| |++|+.+. .+.. .|.+.|.+
T Consensus 94 ~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~l~~~l~~L~~~L~~ 173 (466)
T 1vdk_A 94 VFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVEGLIRTFTA 173 (466)
T ss_dssp SSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhhccccccccccHHHHHHHHHHHHhCccccccccccccCcCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 7899999999987 99999 678 9999 9999975 57998887 5665 88899999
Q ss_pred HHHHHHHhhh
Q psy10234 142 RIESRVMSRM 151 (167)
Q Consensus 142 ~~e~~~~~~~ 151 (167)
++++|.+|-|
T Consensus 174 ~A~~~~~~~~ 183 (466)
T 1vdk_A 174 KAQAFDQIVK 183 (466)
T ss_dssp HHHHTTTCEE
T ss_pred HHHHccCCee
Confidence 9999998866
No 6
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=99.72 E-value=5.1e-18 Score=153.33 Aligned_cols=135 Identities=12% Similarity=0.054 Sum_probs=113.4
Q ss_pred hhhcccCCcchhHHHHHHhhCHH---HHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC
Q psy10234 13 KLWKGCFKENLNKFVEQFTESIT---VDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT 89 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~---~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~ 89 (167)
++|++ .+...+++|+.|.. +|..++++++.+.+||+.|+.+.|+||++++++|.+++++|.+....+.|++++
T Consensus 44 ~~~g~----~t~r~~~~f~~s~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gil~~~~a~aI~~a~~ei~~~~~~~~f~~~~ 119 (488)
T 1yfm_A 44 KYWGA----QTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVASGKLDDHFPLVV 119 (488)
T ss_dssp CCCCH----HHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTSSGGGCCCBS
T ss_pred chhch----HHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhcccccCCCcch
Confidence 68987 67888999999887 589999999999999999999999999999999999999999876667788887
Q ss_pred ----CCchhHHHHHHHH----HHhhc-hhh-hhhh------hhhhhhh-------HHHHHHHH-HHHH---HHHHHHHHH
Q psy10234 90 ----ELEDIHMNIESEL----IKRIE-FQY-YFLL------LQYSELS-------IELKTELE-DIHM---NIESELIKR 142 (167)
Q Consensus 90 ----~~EDiH~~iE~~L----~e~iG-~~g-g~lH------tGRSR~r-------l~lRd~l~-~i~~---~l~~~l~~~ 142 (167)
..+|+|+++|..+ ++.+| +.| +++| +|||||| |++|+.+. .+.. .|.+.|.++
T Consensus 120 ~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~vHp~d~Vn~g~SsNDv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~~ 199 (488)
T 1yfm_A 120 FQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAK 199 (488)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHHC---------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred hhccccccccccHHHHHHHHHHHHhCccccCCccCcccCcCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999977 48899 677 8999 9999975 57888887 6664 888999999
Q ss_pred HHHHHHhhh
Q psy10234 143 IESRVMSRM 151 (167)
Q Consensus 143 ~e~~~~~~~ 151 (167)
+++|.+|-|
T Consensus 200 A~e~~~~v~ 208 (488)
T 1yfm_A 200 SKEFDHIVK 208 (488)
T ss_dssp HHHTTTCEE
T ss_pred HHHhcCcEe
Confidence 999998865
No 7
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=99.72 E-value=4.3e-18 Score=153.10 Aligned_cols=135 Identities=10% Similarity=0.010 Sum_probs=117.9
Q ss_pred hhhcccCCcchhHHHHHHhhCH-HH--HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HHHhcCccccC
Q psy10234 13 KLWKGCFKENLNKFVEQFTESI-TV--DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIE-VDIRENRIELK 88 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~-~~--D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~-~~~~~g~~~~~ 88 (167)
++|++ .++..++.|+.|. .+ |..++++++.+++||+.||.+.|+||++++++|.+++++|. +....+.|+++
T Consensus 21 ~~~g~----~t~r~~~~f~~s~~~~~~~~~~i~~~~~ve~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~f~v~ 96 (478)
T 1jsw_A 21 AYYGV----HTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVD 96 (478)
T ss_dssp CCCCH----HHHHHHHHCCSCSCCSCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHSTTTCSTTCCCCC
T ss_pred cccch----HHHHHHHhCCCcCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhcchhccCCccc
Confidence 68987 3777899999774 56 89999999999999999999999999999999999999998 77667788888
Q ss_pred C----CCchhHHHHHH----HHHHhhch-hhh--hhh------hhhhhhh-------HHHHHHHHHHHH---HHHHHHHH
Q psy10234 89 T----ELEDIHMNIES----ELIKRIEF-QYY--FLL------LQYSELS-------IELKTELEDIHM---NIESELIK 141 (167)
Q Consensus 89 ~----~~EDiH~~iE~----~L~e~iG~-~gg--~lH------tGRSR~r-------l~lRd~l~~i~~---~l~~~l~~ 141 (167)
+ ..||+|+++|. ++++++|+ .|+ ++| +|||||| |++|+.+..+.. .|.+.|.+
T Consensus 97 ~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~lHpnd~Vn~g~SsnDv~~Ta~~L~lr~~l~~l~~~L~~L~~~L~~ 176 (478)
T 1jsw_A 97 VYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFER 176 (478)
T ss_dssp SSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCSSCCCCCCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCcccccccHHHHHHHHHHHHcCccccccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 78999999996 77899994 676 888 8999975 579988866665 88899999
Q ss_pred HHHHHHHhhh
Q psy10234 142 RIESRVMSRM 151 (167)
Q Consensus 142 ~~e~~~~~~~ 151 (167)
++++|.+|-|
T Consensus 177 ~A~~~~~~~m 186 (478)
T 1jsw_A 177 KAVEFQDILK 186 (478)
T ss_dssp HHHHGGGCEE
T ss_pred HHHHhhCCee
Confidence 9999999876
No 8
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=99.71 E-value=1e-18 Score=156.55 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=105.9
Q ss_pred hhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhcCccc----c
Q psy10234 13 KLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSC-GLVKGEEKDIIIKTLNEIEVDIRENRIE----L 87 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~-GIIs~eea~~Il~~L~~i~~~~~~g~~~----~ 87 (167)
.+|+|||.+++++.. ++-+|..+++++|.+++||+.||.++ ||||++++++|. +|.++..++..+.+. +
T Consensus 9 s~~~gRy~~~~~~~~-----~~~sd~~~~~~~i~ve~A~~~ala~~~gii~~~~~~~i~-~l~~~~~~~~~~d~~~i~~~ 82 (465)
T 2qga_B 9 SPIDGRYKKACGELS-----AFFSEHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVE-VLNQIATNITDSDIARVKAI 82 (465)
T ss_dssp STTTTTTHHHHGGGG-----GTSSHHHHHHHHHHHHHHHHHHHHHHTSSSCCCCHHHHH-HHHHHHHCCCHHHHHHHHHH
T ss_pred CcccccccCCcHHHH-----HHhCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHH-HHHHHHHhhccccHHHHHHH
Confidence 479999987766532 23358999999999999999999999 999999998887 466555443222221 1
Q ss_pred -CCCCchhHHHHHHHHHHhhc--------hhhhhhhhhhhhhh-------HHHHHHHH-HHHH---HHHHHHHHHHHHHH
Q psy10234 88 -KTELEDIHMNIESELIKRIE--------FQYYFLLLQYSELS-------IELKTELE-DIHM---NIESELIKRIESRV 147 (167)
Q Consensus 88 -~~~~EDiH~~iE~~L~e~iG--------~~gg~lHtGRSR~r-------l~lRd~l~-~i~~---~l~~~l~~~~e~~~ 147 (167)
....+|| +++|.+|++++| ++|+++|+|||||| |++|+.+. .+.. .|.+.|.++|++|.
T Consensus 83 e~~~~hDV-~a~e~~l~e~~g~~~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~ 161 (465)
T 2qga_B 83 EEETNHDV-KAVEYFVKEKLKNSKREDLLKIKEYVHYLCTSEDINNVAYATCLKACLNDVVIPCLEKIMLKLKDLAVEYS 161 (465)
T ss_dssp HHHHSCHH-HHHHHHHHHHHHTSCCHHHHHHGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCh-HHHHHHHHHHhcccccccchhhhhhccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 2358999 999999999998 78999999999975 57998887 4555 88899999999999
Q ss_pred Hhhh
Q psy10234 148 MSRM 151 (167)
Q Consensus 148 ~~~~ 151 (167)
+|-|
T Consensus 162 ~~~m 165 (465)
T 2qga_B 162 HVPL 165 (465)
T ss_dssp TCEE
T ss_pred CcEe
Confidence 9876
No 9
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=99.71 E-value=9.9e-18 Score=149.94 Aligned_cols=132 Identities=11% Similarity=0.149 Sum_probs=107.5
Q ss_pred hhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHc-CC-----CCHHHHHHHHHHHHHHHH-HHh-cCc
Q psy10234 13 KLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSC-GL-----VKGEEKDIIIKTLNEIEV-DIR-ENR 84 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~-GI-----Is~eea~~Il~~L~~i~~-~~~-~g~ 84 (167)
.+|+|||.+++++....|+ |..++++++.+++||+.||.++ || ||++++++|.+++.++.. ++. ..+
T Consensus 13 s~~~gRy~~~~~~~~~~fs-----d~~~~~~~l~ve~a~~~ala~~~gi~~ip~i~~~~~~~i~~~~~~~~~~d~~~~~~ 87 (459)
T 3bhg_A 13 SPIDGRYVNKTRALSPYFS-----EFALTYYRLMVEIKWFESLAANDTIPEVPALDNKARKFLSDLISNFNESEAEKIKE 87 (459)
T ss_dssp STTTTTTHHHHGGGTTTSS-----HHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcccccccCChHHHHHHcC-----HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhccccHHHHHH
Confidence 5899999977666666665 8999999999999999999999 88 569999999999876622 100 011
Q ss_pred cccCCCCchhHHHHHHHHHHhhc------hhhhhhhhhhhhhh-------HHHHHHHHH-HHH---HHHHHHHHHHHHHH
Q psy10234 85 IELKTELEDIHMNIESELIKRIE------FQYYFLLLQYSELS-------IELKTELED-IHM---NIESELIKRIESRV 147 (167)
Q Consensus 85 ~~~~~~~EDiH~~iE~~L~e~iG------~~gg~lHtGRSR~r-------l~lRd~l~~-i~~---~l~~~l~~~~e~~~ 147 (167)
++ ....+|| +++|..|++++| ++|+++|+|||||| |++|+.+.+ +.. .|.+.|.++|++|.
T Consensus 88 ~e-~~~~~Dv-~a~e~~l~e~~g~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~ 165 (459)
T 3bhg_A 88 FE-KQTNHDV-KAVEYYLQDKFQENEQLKSCVAFIHFACTSEDINNLAYALMIKQAIAQVIQPTIAEIMGSITLLGKQHA 165 (459)
T ss_dssp HT-TTCSSHH-HHHHHHHHHHHTTSTTGGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred HH-HhcCCCh-HHHHHHHHHHhcccccCchhhhhhcCCCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 11 4568999 999999999998 36899999999975 579988884 655 88899999999999
Q ss_pred Hhhh
Q psy10234 148 MSRM 151 (167)
Q Consensus 148 ~~~~ 151 (167)
+|-|
T Consensus 166 ~~~m 169 (459)
T 3bhg_A 166 DVAM 169 (459)
T ss_dssp TCEE
T ss_pred CCEe
Confidence 8866
No 10
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=99.67 E-value=6.4e-17 Score=144.32 Aligned_cols=132 Identities=11% Similarity=0.106 Sum_probs=106.4
Q ss_pred hhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccc--cCC
Q psy10234 12 MKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIE--LKT 89 (167)
Q Consensus 12 ~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~--~~~ 89 (167)
+.+|+|||..+ .+..+. -|..++++++.+.+||+.||.+.|+||++++++|.+++++|..++..+.+. ...
T Consensus 5 ~~~~~~ry~~~---~~~~~~----sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~ 77 (454)
T 1q5n_A 5 SQLYASLFYQR---DVTEIF----SDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGL 77 (454)
T ss_dssp -CTTHHHHSCH---HHHHHT----SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHHHHCCHHHHHHHHHH
T ss_pred CCccccccCcH---HHHHHc----CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhcCCHHHHHHHhhc
Confidence 46899999862 333322 378899999999999999999999999999999999998665443222111 123
Q ss_pred CCchhHHHHHHHHHHhh----chhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 90 ELEDIHMNIESELIKRI----EFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 90 ~~EDiH~~iE~~L~e~i----G~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
..+|| .++|+.|++++ |++|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 78 ~~~dV-ia~~~~l~e~~g~~~g~~~~~vH~g~SsnD~~~Ta~~L~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~ 152 (454)
T 1q5n_A 78 AGNIA-IPFVKQLTAIVKDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTYRHQVM 152 (454)
T ss_dssp HSSSH-HHHHHHHHHHHHTTCTTGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cCCcH-HHHHHHHHHHhccccCCccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 68999 78999999999 889999999999975 579988887776 888999999999998866
No 11
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=99.64 E-value=1.4e-15 Score=135.66 Aligned_cols=129 Identities=12% Similarity=0.134 Sum_probs=102.7
Q ss_pred hhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHH--HH-HHHhcCccccC
Q psy10234 12 MKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNE--IE-VDIRENRIELK 88 (167)
Q Consensus 12 ~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~--i~-~~~~~g~~~~~ 88 (167)
+.+|+|||..+ .+..+. -|..++++++.+.+||+.||.+.|+||++++++|.+++++ +. ..+..+ ..
T Consensus 5 ~~~~~~ry~~~---~~~~~~----sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~~~~~~~~~~~~---~~ 74 (451)
T 3c8t_A 5 SPLYGRSFADD---KMRELF----SAQSFISRCVETEVALARAQARLGIIPEDAAAGITAAARTFAPEMERLRDD---TE 74 (451)
T ss_dssp -CCSSCCCSCH---HHHHHT----SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHCCCCHHHHHHH---HH
T ss_pred CCccccccCcH---HHHHHc----CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhhcCCCHHHHHHH---hh
Confidence 35899999862 333322 3788999999999999999999999999999999999862 21 111111 12
Q ss_pred CCCchhHHHHHHHHHHhhchhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 89 TELEDIHMNIESELIKRIEFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 89 ~~~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
...+|| .++|+.|++++|+.|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 75 ~~~~dV-ia~~~~l~e~~g~~g~~vH~g~SsnDv~~Ta~~L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~ 146 (451)
T 3c8t_A 75 IVGYPI-LPLVEQLSAHAGEAGKYLHWGATTQDIMDTATVLQIRDGLALISRRIESVRKALAALARNHRDTPM 146 (451)
T ss_dssp HHSSSH-HHHHHHHHHHHGGGGGGSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cCCCcH-HHHHHHHHHHcccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcee
Confidence 257999 58899999999999999999999975 578988887766 888999999999998865
No 12
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=99.63 E-value=3.8e-16 Score=141.35 Aligned_cols=133 Identities=17% Similarity=0.115 Sum_probs=109.2
Q ss_pred hhhcccCCcchhHHHHHHhhCHH-HHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC--
Q psy10234 13 KLWKGCFKENLNKFVEQFTESIT-VDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT-- 89 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~-~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~-- 89 (167)
++||+ .+...+++|+.|.. ++..+++....+.+||+.++.+.|+||++++++|.+++++|..+...+.|++++
T Consensus 48 ~~~G~----~t~r~~~~F~is~~~~~~~~I~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~ei~~~~~~~~f~~~~~q 123 (495)
T 4adm_A 48 ALWRA----QTQRAVENFPISGRGLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQ 123 (495)
T ss_dssp CSCCH----HHHHHHHHCCSSSCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCGGGCCCBSSS
T ss_pred hhcCc----hhHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCcccCCCCcchhh
Confidence 69996 56778999986542 334555555666999999999999999999999999999998876678888876
Q ss_pred --CCchhHHHHHHHHHHhh--chhhhhhhh------hhhhhh-------HHHHHHHHH-HHH---HHHHHHHHHHHHHHH
Q psy10234 90 --ELEDIHMNIESELIKRI--EFQYYFLLL------QYSELS-------IELKTELED-IHM---NIESELIKRIESRVM 148 (167)
Q Consensus 90 --~~EDiH~~iE~~L~e~i--G~~gg~lHt------GRSR~r-------l~lRd~l~~-i~~---~l~~~l~~~~e~~~~ 148 (167)
..+|+|+++|..+..+. | |+++|+ |||||| |++|+.+.+ +.. .|.+.|.+++++|.+
T Consensus 124 ~g~gt~~nmnvnevia~ra~lG--G~~vH~~dhVn~g~SsNDv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~kA~e~~d 201 (495)
T 4adm_A 124 TGSGTSSNMNTNEVIASIAAKG--GVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHT 201 (495)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHT--TCCCCTTTTTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccHHHHHHHHHHhC--CCccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 46999999999999954 8 788998 899975 578887754 443 889999999999998
Q ss_pred hhh
Q psy10234 149 SRM 151 (167)
Q Consensus 149 ~~~ 151 (167)
|-|
T Consensus 202 ~v~ 204 (495)
T 4adm_A 202 VVK 204 (495)
T ss_dssp CEE
T ss_pred Cee
Confidence 865
No 13
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=99.61 E-value=4.2e-16 Score=139.52 Aligned_cols=130 Identities=12% Similarity=0.147 Sum_probs=107.4
Q ss_pred hhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHc-CC-----CCHHHHHHHHHHHHHHHHH----Hhc
Q psy10234 13 KLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSC-GL-----VKGEEKDIIIKTLNEIEVD----IRE 82 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~-GI-----Is~eea~~Il~~L~~i~~~----~~~ 82 (167)
.+|+|||.+++++....|+ |..++++++.+++||+.||.+. || ||++++++|.++++++... +..
T Consensus 10 s~~~gRy~~~~~~~~~~fs-----d~~~i~~~~~ve~A~a~ala~~g~i~~ip~i~~~~a~~I~~~~~~i~~g~~~~~~~ 84 (462)
T 2ptr_A 10 SPVDGRYGDKVSALRGIFS-----EYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKT 84 (462)
T ss_dssp STTTTTTGGGSGGGGGTTS-----HHHHHHHHHHHHHHHHHHHHHCTTCTTSCCCCHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcccccccCchHHHHHHCC-----cHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHhccCCHHHHHh
Confidence 5899999988777777776 8999999999999999999999 77 3599999999998766321 111
Q ss_pred CccccCCCCchhHHHHHHHHHHhhch------hhhhhhhhhhhhh-------HHHHHHHHH-HHH---HHHHHHHHHHHH
Q psy10234 83 NRIELKTELEDIHMNIESELIKRIEF------QYYFLLLQYSELS-------IELKTELED-IHM---NIESELIKRIES 145 (167)
Q Consensus 83 g~~~~~~~~EDiH~~iE~~L~e~iG~------~gg~lHtGRSR~r-------l~lRd~l~~-i~~---~l~~~l~~~~e~ 145 (167)
++ ....+|| .++|..|++++|+ +++++|+|||||| |++|+.+.+ +.. .|.+.|.+++++
T Consensus 85 ~~---~~~~~dv-~av~~~l~e~~g~~g~~~~~~~~vH~g~SsnDv~~Ta~~L~lr~~l~~~l~~~L~~L~~~L~~~A~~ 160 (462)
T 2ptr_A 85 IE---RTTNHDV-KAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGLKDLAVQ 160 (462)
T ss_dssp HH---HHHSCHH-HHHHHHHHHHHTTSHHHHTTGGGTTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred hc---cccCCCH-HHHHHHHHHHhccccCCcchhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 3457999 9999999999984 6899999999975 579988875 655 888999999999
Q ss_pred HHHhhh
Q psy10234 146 RVMSRM 151 (167)
Q Consensus 146 ~~~~~~ 151 (167)
|.+|-|
T Consensus 161 ~~~~~~ 166 (462)
T 2ptr_A 161 YRDIPL 166 (462)
T ss_dssp TTTCEE
T ss_pred ccCCEe
Confidence 998866
No 14
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=99.55 E-value=1.7e-14 Score=127.91 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=94.2
Q ss_pred HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHH----HHHHHHHHhcCccccCCCCchhHHHHHHHHHHhhchhhhh
Q psy10234 37 DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKT----LNEIEVDIRENRIELKTELEDIHMNIESELIKRIEFQYYF 112 (167)
Q Consensus 37 D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~----L~~i~~~~~~g~~~~~~~~EDiH~~iE~~L~e~iG~~gg~ 112 (167)
|..++++++.+.+||+.|+.+.|+||++++++|.++ ++.+....+ ...+|| .++|..|++++|+.|++
T Consensus 15 d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~d~~~i~~~~~-------~~~~dV-ia~~~~l~e~~g~~g~~ 86 (429)
T 1c3c_A 15 EEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNAKIDVELFKKIEE-------KTNHDV-VAFVEGIGSMIGEDSRF 86 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHCCCCHHHHHHHHH-------HHCCHH-HHHHHHHHHHHGGGGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhCCCCHHHHHHHHh-------ccCCCh-HHHHHHHHHHcCccccc
Confidence 788999999999999999999999999999999999 577766522 147999 68899999999988999
Q ss_pred hhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 113 LLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 113 lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
+|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 87 vH~g~SsnD~~~Ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~ 135 (429)
T 1c3c_A 87 FHYGLTSSDVLDTANSLALVEAGKILLESLKEFCDVLWEVANRYKHTPT 135 (429)
T ss_dssp TTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred ccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 999999975 578988887776 888999999999998866
No 15
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=99.53 E-value=2.3e-14 Score=127.73 Aligned_cols=111 Identities=15% Similarity=0.104 Sum_probs=95.9
Q ss_pred CHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHH----HHHHHHHHhcCccccCCCCchhHHHHHHHHHHhh--
Q psy10234 33 SITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKT----LNEIEVDIRENRIELKTELEDIHMNIESELIKRI-- 106 (167)
Q Consensus 33 s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~----L~~i~~~~~~g~~~~~~~~EDiH~~iE~~L~e~i-- 106 (167)
++-.|..++++++.+.+||+.|+.+.|+||++++++|.++ ++.+....+ ...+|| .++|+.|++++
T Consensus 21 ~i~sd~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~d~~~i~~~~~-------~~~~dV-ia~~~~l~e~~g~ 92 (444)
T 2pfm_A 21 AIWTEENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHASFDIDRIYEIEK-------ETRHDV-VAFTRAVSETPAL 92 (444)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHCCCCHHHHHHHHH-------HHCCHH-HHHHHHHHTCTTC
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhCCCCHHHHHHHhc-------cCCCCH-HHHHHHHHHHcCC
Confidence 3445899999999999999999999999999999999999 577766522 257999 78899999999
Q ss_pred chhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 107 EFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 107 G~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
|+.|+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 93 g~~g~~vH~g~SsnDv~~Ta~~L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~ 147 (444)
T 2pfm_A 93 GEERKWVHYGLTSTDVVDTALSYILKQANEIILKDLENFVSILANKAKEHKYTIM 147 (444)
T ss_dssp CGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CcccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 789999999999975 579988887776 888999999999998765
No 16
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=99.52 E-value=9.3e-15 Score=128.80 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=96.7
Q ss_pred hhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHH---HHHHHHHHhcCccccCCC
Q psy10234 14 LWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKT---LNEIEVDIRENRIELKTE 90 (167)
Q Consensus 14 LW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~---L~~i~~~~~~g~~~~~~~ 90 (167)
.|+|||.. +.+ ..+-.|..++++++.+.+||+.|+.+.|+||++++++|.++ ++.+... . ...
T Consensus 5 p~~~ry~~---~~~----~~i~sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~d~~~~~~~--~-----~~~ 70 (403)
T 1dof_A 5 PFDWRYGS---EEI----RRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRL--E-----RET 70 (403)
T ss_dssp GGGTTSSC---HHH----HTTSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC--------------
T ss_pred CcccccCc---HHH----HHHcChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH--h-----hcc
Confidence 58899975 233 34445899999999999999999999999999999999988 3333221 1 125
Q ss_pred CchhHHHHHHHHHHhhchhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 91 LEDIHMNIESELIKRIEFQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 91 ~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
.+|| .++|..|++++| |+++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 71 ~~dV-ia~~~~l~e~~G--g~~vH~g~SsnD~~~Ta~~l~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~ 138 (403)
T 1dof_A 71 GHDI-LSLVLLLEQKSG--CRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEM 138 (403)
T ss_dssp -CHH-HHHHHHHHHHHC--CSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCcH-HHHHHHHHHHcC--CCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 7999 688999999999 899999999975 578888877766 888999999999998765
No 17
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=99.48 E-value=1.1e-13 Score=123.21 Aligned_cols=108 Identities=16% Similarity=0.108 Sum_probs=92.1
Q ss_pred HHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHH-------HHHHHHhcCccccCCCCchhHHHHHHHHHHhhc-
Q psy10234 36 VDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLN-------EIEVDIRENRIELKTELEDIHMNIESELIKRIE- 107 (167)
Q Consensus 36 ~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~-------~i~~~~~~g~~~~~~~~EDiH~~iE~~L~e~iG- 107 (167)
.|..++++++.+.+||+.|+.+.|+||++++++|.++++ .+... .+ ...+||| ++|..|++++|
T Consensus 20 s~~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~~~f~~~~~~~~--~~-----~~~~dV~-a~~~~l~e~~g~ 91 (450)
T 1re5_A 20 SDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANA--IA-----TAGNSAI-PLVKALGKVIAT 91 (450)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCGGGSCHHHHHHH--HH-----HHSSSHH-HHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCCHHHHHHH--Hh-----ccCccHH-HHHHHHHHHhCC
Confidence 478899999999999999999999999999999999974 33322 11 2479998 88999999999
Q ss_pred --hh-hhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 108 --FQ-YYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 108 --~~-gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
+. ++++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 92 ~~~~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~ 148 (450)
T 1re5_A 92 GVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPL 148 (450)
T ss_dssp HCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCCcccccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCee
Confidence 76 999999999975 578988877766 888999999999998865
No 18
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=99.46 E-value=1.5e-13 Score=123.44 Aligned_cols=128 Identities=14% Similarity=0.114 Sum_probs=105.2
Q ss_pred hHHHHHHh-hCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCCC----CchhHHHH
Q psy10234 24 NKFVEQFT-ESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKTE----LEDIHMNI 98 (167)
Q Consensus 24 ~~~~~~f~-~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~~----~EDiH~~i 98 (167)
...++.|. +...++..+++..+.+.+||+.++.+.|+||++++++|.+++++|......+.|++++- .+|+|+++
T Consensus 28 ~ra~~nf~i~~~~~~~~~i~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~~i~~~~~~~~f~~~~~~~g~gt~~nmnv 107 (468)
T 3r6q_A 28 IRATENFPITGYRIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEVIEGKWNDQFIVDPIQGGAGTSINMNA 107 (468)
T ss_dssp HHHHHHCCSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTGGGCCSCSSCSSTTHHHHHHH
T ss_pred HHHHHccccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCccccCCCccHHhccccccccccH
Confidence 33577774 34456789999999999999999999999999999999999999987666778888774 46898887
Q ss_pred H----HHHHHhhchh-hhh--hhh------hhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 99 E----SELIKRIEFQ-YYF--LLL------QYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 99 E----~~L~e~iG~~-gg~--lHt------GRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
+ .++++.+|+. |++ +|+ |||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 108 nevia~~~~e~~G~~~g~y~~vHpndhVn~g~SsnDv~~Ta~~L~~r~~l~~l~~~L~~L~~~L~~~A~~~~~~v~ 183 (468)
T 3r6q_A 108 NEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLLNQLIETTKYMQQEFMKKADEFAGVIK 183 (468)
T ss_dssp HHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHhccccCCcCccCCccCCCCCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEE
Confidence 6 5677889965 443 996 999975 578888877765 788999999999998865
No 19
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=99.41 E-value=1.5e-13 Score=123.33 Aligned_cols=130 Identities=11% Similarity=0.002 Sum_probs=102.3
Q ss_pred hhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHhcCccccCCC
Q psy10234 13 KLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGL--VKGEEKDIIIKTLNEIEVDIRENRIELKTE 90 (167)
Q Consensus 13 kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GI--Is~eea~~Il~~L~~i~~~~~~g~~~~~~~ 90 (167)
..|.||+.++ .+ +..+- | |...+...+...+||+.++.+.|+ ||++++++|.++++++..+...+. + ...
T Consensus 9 spl~~ry~~~-~~-m~~~f-s---~~~~~~~~~~~e~Ala~a~~~~Gl~~i~~~~~~~I~~~l~~i~~~~~~~~-e-~~~ 80 (478)
T 1yis_A 9 SVLSTRYCKN-SP-LVSIL-S---ETNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEMKSNRDVFDWPFIRSE-E-RKL 80 (478)
T ss_dssp CHHHHTTTTT-CT-HHHHT-S---HHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHTTTCCCHHHHHHH-H-HHS
T ss_pred CCcccccCCh-HH-HHHHc-C---chHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhCCHHHHhhH-H-Hhc
Confidence 4678888754 21 33322 2 334677888999999999999999 999999999999877765533321 1 467
Q ss_pred CchhHHHHHHHHHHhhchhhhhhhhhhhhh-------hHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 91 LEDIHMNIESELIKRIEFQYYFLLLQYSEL-------SIELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 91 ~EDiH~~iE~~L~e~iG~~gg~lHtGRSR~-------rl~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
.+|||.++|. |++++|++|+++|+|||++ .||+|+.+..+.. .|.+.|.++|++|.+|-|
T Consensus 81 ~~DV~a~v~~-l~e~~g~~~~~iH~G~TS~Di~~ta~~L~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~m 150 (478)
T 1yis_A 81 KHDVMAHNHA-FGKLCPTAAGIIHLGATSCFVQDNADLIAYRDSIDHILKRFATVIDRLAAFSLKNKEVVT 150 (478)
T ss_dssp SCHHHHHHHH-HHHHCTTTGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCcHHHHHHH-HHHhhhhchhheeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 8999999996 8999999999999999553 3689998877766 888999999999999865
No 20
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=99.39 E-value=6.6e-13 Score=115.58 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=99.0
Q ss_pred hhhhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH---HhcCccccC
Q psy10234 12 MKLWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVD---IRENRIELK 88 (167)
Q Consensus 12 ~kLW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~---~~~g~~~~~ 88 (167)
..+|+++|.++ .+...- -|..++.+...+.+||+.|+.+.|+||++++++|.++++++..+ +..+ .
T Consensus 8 ~~l~~~~~~~~---~m~~~f----s~~~~i~~~~~ve~A~a~a~~~~G~i~~~~a~~I~~~~~~i~~~~~~~~~~----~ 76 (359)
T 2fel_A 8 HPFLSGLFGDS---EIIELF----SAKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLSEFAADMSALRHG----V 76 (359)
T ss_dssp CTTTHHHHCCH---HHHGGG----SHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCCCCHHHHHHH----H
T ss_pred ccccccccCCH---HHHHHc----CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhccccHHHHHhh----c
Confidence 35777666532 222221 25667778888889999999999999999999999999865322 1111 1
Q ss_pred CCCchhHHHHHHHHHHhhc-hhhhhhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 89 TELEDIHMNIESELIKRIE-FQYYFLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 89 ~~~EDiH~~iE~~L~e~iG-~~gg~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
...++.+.++|+.|.+.+| +.|+++|+|||||| |++|+.+..+.. .|.+.|.++|++|.+|-|
T Consensus 77 ~~~~~~~~~~~~~l~~~~g~~~~~~vH~G~SsnDv~~Ta~~l~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~~ 150 (359)
T 2fel_A 77 AKDGVVVPELIRQMRAAVAGQAADKVHFGATSQDVIDTSLMLRLKMAAEIIATRLGHLIDTLGDLASRDGHKPL 150 (359)
T ss_dssp HHHSSSHHHHHHHHHTTSCGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred cccCCcHHHHHHHHHHHcCccccchhcCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEe
Confidence 2346678899999999998 58999999999975 579988887766 888899999999999866
No 21
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=99.36 E-value=2.2e-12 Score=116.29 Aligned_cols=126 Identities=10% Similarity=0.049 Sum_probs=102.2
Q ss_pred HHHHHhhC-HHH--HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC----CCchhHHHH
Q psy10234 26 FVEQFTES-ITV--DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT----ELEDIHMNI 98 (167)
Q Consensus 26 ~~~~f~~s-~~~--D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~----~~EDiH~~i 98 (167)
.++.|-.| ..+ ...+++....+.+||+.++.+.|+||++++++|.+++++|......+.|++++ ..+|+|+++
T Consensus 48 a~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~~G~l~~~~a~aI~~a~~ei~~g~~~~~f~~~~~q~g~gt~~nmnv 127 (478)
T 3ocf_A 48 AVENFSLSDVALNHIPALVRALAMVKKAAATANYKLRQLPEPKYAAIVAACDDIIDGLLMEQFVVDVFQGGAGTSSNMNA 127 (478)
T ss_dssp HHHHCCCSSCBGGGSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTTTGGGCCCBTTCSSTTHHHHHHH
T ss_pred HHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCccccCCCcchhhccCCccccchH
Confidence 47777422 222 26889999999999999999999999999999999999998765567787766 468999987
Q ss_pred H----HHHHHhhch-hhhh--hh------hhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 99 E----SELIKRIEF-QYYF--LL------LQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 99 E----~~L~e~iG~-~gg~--lH------tGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
+ .++++.+|+ .|++ +| +|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 128 nevia~~a~e~~G~~~G~~~~vHpndhVn~g~SsNDv~~Ta~~L~~~~~l~~L~~~L~~L~~~L~~kA~e~~d~v~ 203 (478)
T 3ocf_A 128 NEVIANRALEHLGRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQNQVQTALHRLIAAFEAKGREFATVIK 203 (478)
T ss_dssp HHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHhchhcCCCCccCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEe
Confidence 6 466788994 6777 99 9999976 568888776665 788899999999988765
No 22
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=99.35 E-value=1.9e-12 Score=115.30 Aligned_cols=106 Identities=12% Similarity=0.157 Sum_probs=87.4
Q ss_pred HHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHH----HHHHHHHhcCccccCCCCchhHHHHHHHHHHhhchh-hh
Q psy10234 37 DRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTL----NEIEVDIRENRIELKTELEDIHMNIESELIKRIEFQ-YY 111 (167)
Q Consensus 37 D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L----~~i~~~~~~g~~~~~~~~EDiH~~iE~~L~e~iG~~-gg 111 (167)
|...+...+.+..||+.++.+ |+||++++++|.+++ +.+.+. . ....+||| ++|+.|++++|+. |+
T Consensus 16 ~~~~~~~~l~ve~Ala~a~~~-GlIp~~~~~~i~~~~~~d~~~i~~~-e------~~~~hdV~-a~~~~l~e~~g~~~~~ 86 (438)
T 4eei_A 16 DENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQIRPERVDEI-E------KVTKHDII-AFCTSIAEQFTAETGK 86 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-TTSCTTHHHHHHHHCCCCHHHHHHH-H------HHHSCHHH-HHHHHHHTTSCTTTTT
T ss_pred hHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCCCCHHHHHHH-H------HhcCCCHH-HHHHHHHHHcCHHhhc
Confidence 557888899999999999999 999999999998873 222222 1 12357997 8999999999987 99
Q ss_pred hhhhhhhhhh-------HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 112 FLLLQYSELS-------IELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 112 ~lHtGRSR~r-------l~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
++|+|||||| |++|+.+..+.. .|.+.|.+++++|.+|-|
T Consensus 87 ~iH~G~SsnDv~~Ta~~L~lr~~~~~l~~~L~~l~~~L~~~A~~~~~~~m 136 (438)
T 4eei_A 87 FFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIIT 136 (438)
T ss_dssp TTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 9999999975 578888876665 888999999999999876
No 23
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=99.30 E-value=1.2e-12 Score=118.52 Aligned_cols=128 Identities=14% Similarity=0.073 Sum_probs=100.0
Q ss_pred hhcccCCcchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q psy10234 14 LWKGCFKENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGL-VKGEEKDIIIKTLNEIEVDIRENRIELKTELE 92 (167)
Q Consensus 14 LW~gR~~~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GI-Is~eea~~Il~~L~~i~~~~~~g~~~~~~~~E 92 (167)
.+.+|+..+ .+..+- | |...+...+...+||+.++.+.|+ ||++++++|.++++++..+...+ ++ ....+
T Consensus 38 pl~~ry~~~---~m~~~f-S---~~~~~~~~~~~e~Ala~a~~~~Gl~i~~e~~~~I~~~l~~i~~~~~~~-~e-~~~~h 108 (503)
T 2j91_A 38 PLASRYASP---EMCFVF-S---DRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENIDFKMAAE-EE-KRLRH 108 (503)
T ss_dssp HHHHTTSCH---HHHHHT-S---HHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTSSCCCHHHHHH-HH-HHHSC
T ss_pred CcccccCCH---HHHHHh-C---hhHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCHHHHhh-hh-hhcCC
Confidence 466777642 343332 2 345777889999999999999999 99999999999887765543222 11 35679
Q ss_pred hhHHHHHHHHHHhhchhhhhhhhhhhhh-------hHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy10234 93 DIHMNIESELIKRIEFQYYFLLLQYSEL-------SIELKTELEDIHM---NIESELIKRIESRVMSRM 151 (167)
Q Consensus 93 DiH~~iE~~L~e~iG~~gg~lHtGRSR~-------rl~lRd~l~~i~~---~l~~~l~~~~e~~~~~~~ 151 (167)
|||.++|. |++++|++|+++|+|||++ .|++|+.+..+.. .|.+.|.++|++|.+|-|
T Consensus 109 DV~a~v~~-l~e~~g~~~~~iH~G~TS~Di~dta~~L~lr~al~~l~~~L~~L~~~L~~~A~~~~~~~m 176 (503)
T 2j91_A 109 DVMAHVHT-FGHCCPKAAGIIHLGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPT 176 (503)
T ss_dssp HHHHHHHH-HHHHCTTTGGGTTTTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cHHHHHHH-HHHHhccccccccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEe
Confidence 99999995 8999999999999999553 3689988877766 888899999999998866
No 24
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=99.11 E-value=1.9e-10 Score=104.10 Aligned_cols=125 Identities=12% Similarity=0.021 Sum_probs=99.4
Q ss_pred HHHHHhhCH---HHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCC----CCchhHH--
Q psy10234 26 FVEQFTESI---TVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKT----ELEDIHM-- 96 (167)
Q Consensus 26 ~~~~f~~s~---~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~----~~EDiH~-- 96 (167)
.++.|-.+- .+...+++....+.+|++.++.+.| |+++.+.+|++++++|......+.|+.+. .-+++|+
T Consensus 55 a~~nf~i~~~~~~~~~~~i~a~~~vkkAaA~an~~~G-l~~~~a~aI~~a~~ev~~g~~~~~Fp~~~~q~Gsgt~~nmn~ 133 (490)
T 3e04_A 55 STMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYG-LDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNV 133 (490)
T ss_dssp HHHHCCCSCGGGBCCHHHHHHHHHHHHHHHHHGGGGT-CCHHHHHHHHHHHHHHHTTSCGGGCCCBSSSCTTCHHHHHHH
T ss_pred HHHcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-CCHHHHHHHHHHHHHHHcCCcccCCceeeecCCCCCcccccH
Confidence 577785432 2457899999999999999999999 99999999999999998764556777654 2456555
Q ss_pred --HHHHHHHHhhc-hhhhhh--hh------hhhhhh-------HHHHHHHHH-H---HHHHHHHHHHHHHHHHHhhh
Q psy10234 97 --NIESELIKRIE-FQYYFL--LL------QYSELS-------IELKTELED-I---HMNIESELIKRIESRVMSRM 151 (167)
Q Consensus 97 --~iE~~L~e~iG-~~gg~l--Ht------GRSR~r-------l~lRd~l~~-i---~~~l~~~l~~~~e~~~~~~~ 151 (167)
.||+++++++| +.|++. |+ |||||| |++|+.+.+ + +..|.+.|.+++++|.+|-|
T Consensus 134 NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~~~L~~~L~~L~~aL~~kA~e~~d~v~ 210 (490)
T 3e04_A 134 NEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIK 210 (490)
T ss_dssp HHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHhCcccCCCCCCCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcee
Confidence 59999999999 688874 77 999976 467766643 3 34888999999999998865
No 25
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=99.04 E-value=6.5e-10 Score=100.43 Aligned_cols=126 Identities=11% Similarity=-0.045 Sum_probs=99.1
Q ss_pred HHHHHh-hCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCCCC--------chhHH
Q psy10234 26 FVEQFT-ESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKTEL--------EDIHM 96 (167)
Q Consensus 26 ~~~~f~-~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~~~--------EDiH~ 96 (167)
.++.|- +...++..+++....+-+|++.++.+.|+|+++.+..|.+++++|....-.+.|+.++-. .+++.
T Consensus 50 a~~nf~i~~~~~~~~~i~a~~~vk~AaA~an~~~G~l~~~~a~aI~~a~~ev~~g~~~~~fp~~~~q~gsGt~~Nmn~Ne 129 (482)
T 3gtd_A 50 SLNNFKISKQKMPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQTNMNMNE 129 (482)
T ss_dssp HHHHCCCCSCBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTTTTTSCCCBSSSCTTCHHHHHHHHH
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCcccCCCeehhccCCCccccchHHH
Confidence 466664 223357899999999999999999999999999999999999999875345667766532 24677
Q ss_pred HHHHHHHHhhc-hhhhhh--hh------hhhhhh-------HHHHHHHHH-H---HHHHHHHHHHHHHHHHHhhh
Q psy10234 97 NIESELIKRIE-FQYYFL--LL------QYSELS-------IELKTELED-I---HMNIESELIKRIESRVMSRM 151 (167)
Q Consensus 97 ~iE~~L~e~iG-~~gg~l--Ht------GRSR~r-------l~lRd~l~~-i---~~~l~~~l~~~~e~~~~~~~ 151 (167)
.||+++++.+| +.|++. |+ |||||| |++|+.+.+ + +..|.+.|.+++++|.+|-|
T Consensus 130 vIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~~~L~~~L~~L~~~L~~kA~e~~d~v~ 204 (482)
T 3gtd_A 130 VIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKSKDWDKIIK 204 (482)
T ss_dssp HHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTGGGCEE
T ss_pred HHHHHHHHHhCcccCCcCcCCccccCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEe
Confidence 79999999999 678764 66 999976 457766643 3 34888899999999988865
No 26
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=98.22 E-value=8.1e-06 Score=73.80 Aligned_cols=126 Identities=9% Similarity=-0.053 Sum_probs=93.1
Q ss_pred HHHHHhh-CHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCCCC----c----hhHH
Q psy10234 26 FVEQFTE-SITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKTEL----E----DIHM 96 (167)
Q Consensus 26 ~~~~f~~-s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~~~----E----DiH~ 96 (167)
.++.|.. ...+...+.+....+-+|-+....+.|+|+++.+..|.++.++|....-.+.|+.+.-. . .+..
T Consensus 61 a~~nf~i~~~~~~~~~i~a~~~vk~AaA~an~~lG~l~~~~a~aI~~A~~ei~~g~~~~~F~~d~~q~gsgt~~nmn~ne 140 (495)
T 4hgv_A 61 SLGNFKIGWEKQPLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAAQEVIDGKLDEHFPLVVWQTGSGTQSNMNANE 140 (495)
T ss_dssp HHHHCCCCSCBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSSGGGCCCBSSSCTTCHHHHHHHHH
T ss_pred HHHccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCchhhccchhhhhhccccccCcchhH
Confidence 4777752 23345778888899999999999999999999999999999999865344567665421 1 2344
Q ss_pred HHHHHHHHhhch-hh--------hhhhhhhhhhhH-------HHHHHHHH----HHHHHHHHHHHHHHHHHHhhh
Q psy10234 97 NIESELIKRIEF-QY--------YFLLLQYSELSI-------ELKTELED----IHMNIESELIKRIESRVMSRM 151 (167)
Q Consensus 97 ~iE~~L~e~iG~-~g--------g~lHtGRSR~rl-------~lRd~l~~----i~~~l~~~l~~~~e~~~~~~~ 151 (167)
.|-....+.+|. .| ..+|.|+|+||+ ++++.+.+ -+..|.++|.+++++|.+|-|
T Consensus 141 vian~a~e~lg~~~g~~~~vhpnd~Vh~gqSsnDv~~TA~~l~~~~~~~~~L~~~L~~L~~~L~~kA~~~~~~~~ 215 (495)
T 4hgv_A 141 VVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERVIHDLLPALKHLHKALEEKVKAFDHIIK 215 (495)
T ss_dssp HHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCcccCCCCCCCHHHhccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 556666777774 22 349999999864 57776644 334788999999999998865
No 27
>3exm_A Phosphatase SC4828; nucleoside diphosphatase, GDP/UDP'ASE, non-HYD GDP analogue, lipocalcin fold, metalloprotein, hydrolase; HET: GP2; 1.65A {Streptomyces coelicolor A3} PDB: 3cbt_A* 3bxt_A
Probab=60.17 E-value=9.1 Score=31.35 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=34.3
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCCCCch
Q psy10234 56 HSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKTELED 93 (167)
Q Consensus 56 ~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~~~ED 93 (167)
.+.|.+|+++++.+.++.+.+...++.+.++|+++++|
T Consensus 175 ~~~g~y~~e~~~~a~~~~~~L~~~I~~~~~PF~~~~~~ 212 (237)
T 3exm_A 175 LRDGLMDPASAGRVRRAGRSAVAEIRAWGSPFADGWEH 212 (237)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHTCTTGGGTGGG
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCccc
Confidence 36899999999999999999999999999999887765
No 28
>2odm_A YLAN, UPF0358 protein MW0995; triple helix, unknown function; 2.24A {Staphylococcus aureus subsp}
Probab=56.15 E-value=23 Score=24.98 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=28.9
Q ss_pred HHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q psy10234 36 VDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEV 78 (167)
Q Consensus 36 ~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~ 78 (167)
.|..+|...-.++.| .+.|+|+.+++++|+..|++=..
T Consensus 45 lDTQmfGlSrEIdFA-----vrlGli~~~~Gk~ll~~LE~~Ls 82 (91)
T 2odm_A 45 LDTQMFGLQKEVDFA-----VKLGLVDREDGKQIMLRLEKELS 82 (91)
T ss_dssp HHHHHHHHHHHHHHH-----HHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHH-----HHHCCccHHHHHHHHHHHHHHHH
Confidence 456666666666555 67899999999999999887444
No 29
>2gbo_A UPF0358 protein EF2458; structural genomics, hypothetical protein, PSI, protein STRU initiative, midwest center for structural genomics; 2.20A {Enterococcus faecalis} SCOP: a.23.6.1
Probab=50.48 E-value=30 Score=24.93 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=27.9
Q ss_pred HHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q psy10234 36 VDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIE 77 (167)
Q Consensus 36 ~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~ 77 (167)
.|..+|-..-.++.| .+.|+|+.+++++|+..|++=.
T Consensus 47 lDTQmyGlSrEIdFA-----VrlGli~~~~Gk~ll~~LE~~L 83 (104)
T 2gbo_A 47 VDTQMYGFSRQVTYA-----TRLGILTNDEGHRLLSDLEREL 83 (104)
T ss_dssp HHHHHHHHHHHHHHH-----HHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhchHHHHHHH-----HHHcCccHHHHHHHHHHHHHHH
Confidence 456666666555555 6789999999999999888743
No 30
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=32.16 E-value=51 Score=22.99 Aligned_cols=74 Identities=15% Similarity=0.288 Sum_probs=50.3
Q ss_pred cchhHHHHHHhhCHHHHHHhHHHhhhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCccccCCCCchhHHHHHH
Q psy10234 21 ENLNKFVEQFTESITVDRRLYKEDIEGSIAHVTMLHSCGLVKGEEKDIIIKTLNEIEVDIRENRIELKTELEDIHMNIES 100 (167)
Q Consensus 21 ~~~~~~~~~f~~s~~~D~~L~~~dI~~s~AHv~mL~~~GIIs~eea~~Il~~L~~i~~~~~~g~~~~~~~~EDiH~~iE~ 100 (167)
..|.+.+.+.+....-+-..|+.-|.-.--|+..+...--+|+.+ |..+|.++.+.+ +.+......+|..|+.
T Consensus 4 ~~P~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~---L~~~l~~~h~~F----iaLAa~l~~lH~~V~~ 76 (93)
T 3t98_B 4 MAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQD---LSMAMQKIYQTF----VALAAQLQSIHENVKV 76 (93)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHH---HHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHH---HHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 356777788876666667778888999999999998877788754 444454444432 2223345778888776
Q ss_pred H
Q psy10234 101 E 101 (167)
Q Consensus 101 ~ 101 (167)
.
T Consensus 77 ~ 77 (93)
T 3t98_B 77 L 77 (93)
T ss_dssp H
T ss_pred H
Confidence 4
No 31
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=31.95 E-value=45 Score=21.54 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=17.1
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy10234 60 LVKGEEKDIIIKTLNEIEVD 79 (167)
Q Consensus 60 IIs~eea~~Il~~L~~i~~~ 79 (167)
-+|.+.+.+|+++|++-.+.
T Consensus 4 ~lt~eq~~aILkaLdeaIe~ 23 (57)
T 3fxd_A 4 QLSDEQKETILKALNDAIEK 23 (57)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHc
Confidence 47899999999999987665
No 32
>3anw_B GINS23, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=21.34 E-value=1.3e+02 Score=23.31 Aligned_cols=53 Identities=19% Similarity=0.161 Sum_probs=39.0
Q ss_pred HHHHHHcCCCCH-HHHHHHHHHHHHHHHHHhcCccccCCCCchhHHHHHHHHHHh
Q psy10234 52 VTMLHSCGLVKG-EEKDIIIKTLNEIEVDIRENRIELKTELEDIHMNIESELIKR 105 (167)
Q Consensus 52 v~mL~~~GIIs~-eea~~Il~~L~~i~~~~~~g~~~~~~~~EDiH~~iE~~L~e~ 105 (167)
+..|.+.|++.- +|+..++..|.++..+ ....-++.+=++|.|.-++.++.+.
T Consensus 39 A~~L~e~g~vei~d~~~~~I~eL~~il~e-Er~~~~L~~LP~dFY~rvr~yI~~L 92 (171)
T 3anw_B 39 ARELWEAGVVEIVDETDKIIGEIDKVIAE-ERESEPLTLLPEGLYERAEFYAYYL 92 (171)
T ss_dssp HHHHHHTTSEEECCTHHHHHHHHHHHHHH-HTTSSSCCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHCCCEeeccccchHHHHHHHHHHH-hhccCccccCCHHHHHHHHHHHHHH
Confidence 578999999884 4477788888887754 2223455677899999999887644
No 33
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=21.28 E-value=63 Score=27.40 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q psy10234 50 AHVTMLHSCGLVKGEEKDIIIKTLNEIEV 78 (167)
Q Consensus 50 AHv~mL~~~GIIs~eea~~Il~~L~~i~~ 78 (167)
-...-|.+.|++|+++.++|.+...+...
T Consensus 298 ~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 326 (368)
T 1w85_A 298 RFRKFLEAKGLWSEEEENNVIEQAKEEIK 326 (368)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 34557889999999999999887766443
No 34
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=20.48 E-value=58 Score=27.39 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=21.3
Q ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHH
Q psy10234 51 HVTMLHSCGLVKGEEKDIIIKTLNEIE 77 (167)
Q Consensus 51 Hv~mL~~~GIIs~eea~~Il~~L~~i~ 77 (167)
...-|.++|++|+++.++|.+..++..
T Consensus 300 ~~~~L~~~g~~~~~~~~~i~~~~~~~v 326 (367)
T 1umd_A 300 FRRFLEARGLWNEEWEEDVREEIRAEL 326 (367)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 345788999999999999887766543
Done!