BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1024
(514 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193666871|ref|XP_001947031.1| PREDICTED: hypothetical protein LOC100168816 [Acyrthosiphon pisum]
Length = 1481
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 101/143 (70%), Gaps = 24/143 (16%)
Query: 225 SLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMP-GVDSVK-HEALTIS 282
SL+ALRAH A+H G+ MG + GMP G++ +K + ++ S
Sbjct: 963 SLEALRAHT---AIH----------GY-------MGAMELATGMPPGMEMIKPDQMMSQS 1002
Query: 283 GDEGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDL 342
D+G+ EEE PSP H+P GPSPEPKIEDSECHRSQSAIFL+HWNRG++NSCCRTDL
Sbjct: 1003 TDDGNN--EEESSPSPNLHVPHGPSPEPKIEDSECHRSQSAIFLKHWNRGEFNSCCRTDL 1060
Query: 343 TFKPVPDSKLARKREERLRKQAE 365
TFKPVP+SKL+RKREER R+QAE
Sbjct: 1061 TFKPVPESKLSRKREERTRRQAE 1083
>gi|357608228|gb|EHJ65885.1| hypothetical protein KGM_11067 [Danaus plexippus]
Length = 1316
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/81 (87%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Query: 285 EGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTF 344
E QPEEEEIPSP HIP GPSPEPKIED+ECHRSQSAIFLRHWNRGDYNSC RTDL F
Sbjct: 878 ETQSQPEEEEIPSP-AHIPHGPSPEPKIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLIF 936
Query: 345 KPVPDSKLARKREERLRKQAE 365
KPVP+SKLARKREERLRKQAE
Sbjct: 937 KPVPESKLARKREERLRKQAE 957
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
Query: 176 LELEHLEREKREREIRELRERELNDRIKEDLIKN--ASRPFDPHWLELQR 223
LELEHLEREKR+REIRELRERELNDR+KE+L+KN R DPHWLE+ R
Sbjct: 1056 LELEHLEREKRDREIRELRERELNDRLKEELLKNNVGPRAIDPHWLEMHR 1105
>gi|242017148|ref|XP_002429054.1| grunge, putative [Pediculus humanus corporis]
gi|212513909|gb|EEB16316.1| grunge, putative [Pediculus humanus corporis]
Length = 1644
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/77 (84%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
Query: 288 MQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPV 347
+ PEE+E P HIPR PSPEPKIED+ECHRSQSAIF+RHWNRGDYNSC RTDLTFKPV
Sbjct: 1170 ITPEEDE--GSPQHIPRVPSPEPKIEDTECHRSQSAIFVRHWNRGDYNSCTRTDLTFKPV 1227
Query: 348 PDSKLARKREERLRKQA 364
PDSKLARKREERLRKQA
Sbjct: 1228 PDSKLARKREERLRKQA 1244
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Query: 174 YQLELEHLEREKREREIRELRERELNDRIKEDLIKNAS----------RPFDPHWLELQR 223
Y LELEHLEREKRERE+RELRERELNDR+KE+L+KNA P DPHWLEL R
Sbjct: 1344 YGLELEHLEREKRERELRELRERELNDRLKEELMKNAGVAGAPGTRMPTPLDPHWLELHR 1403
Query: 224 SSLDALRAHALAAALHSPLPPHGMAAGHPAF 254
L+ P G AG PA
Sbjct: 1404 RYGGLPGGPPPQFGLY---PSPGHPAGPPAL 1431
>gi|28574395|ref|NP_788478.1| grunge, isoform C [Drosophila melanogaster]
gi|28380568|gb|AAO41268.1| grunge, isoform C [Drosophila melanogaster]
Length = 1988
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 91/151 (60%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH H
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH------------H----------P 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|24660942|ref|NP_523973.2| grunge, isoform H [Drosophila melanogaster]
gi|23093911|gb|AAF50413.2| grunge, isoform H [Drosophila melanogaster]
Length = 1985
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 91/151 (60%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH H
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH------------H----------P 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|18700713|gb|AAL78679.1|AF475087_1 transcriptional corepressor Atro [Drosophila melanogaster]
Length = 1985
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|45552995|ref|NP_996025.1| grunge, isoform D [Drosophila melanogaster]
gi|386770802|ref|NP_001246670.1| grunge, isoform E [Drosophila melanogaster]
gi|45445992|gb|AAS65054.1| grunge, isoform D [Drosophila melanogaster]
gi|383291813|gb|AFH04341.1| grunge, isoform E [Drosophila melanogaster]
Length = 1985
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 91/151 (60%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH H
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH------------H----------P 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|24660946|ref|NP_659574.1| grunge, isoform A [Drosophila melanogaster]
gi|23093912|gb|AAN12008.1| grunge, isoform A [Drosophila melanogaster]
Length = 1966
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 91/151 (60%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH H
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH------------H----------P 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|195441551|ref|XP_002068571.1| GK20351 [Drosophila willistoni]
gi|194164656|gb|EDW79557.1| GK20351 [Drosophila willistoni]
Length = 2052
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 1770 EPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSK 1829
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1830 LARKREERDRKLAE 1843
>gi|442631044|ref|NP_001261581.1| grunge, isoform J [Drosophila melanogaster]
gi|440215489|gb|AGB94276.1| grunge, isoform J [Drosophila melanogaster]
Length = 2007
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|386770804|ref|NP_001246671.1| grunge, isoform F [Drosophila melanogaster]
gi|383291814|gb|AFH04342.1| grunge, isoform F [Drosophila melanogaster]
Length = 1988
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|6984076|gb|AAF34752.1|AF217844_1 GRUNGE [Drosophila melanogaster]
Length = 1966
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 91/151 (60%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH H
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH------------H----------P 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|195491186|ref|XP_002093454.1| GE20743 [Drosophila yakuba]
gi|194179555|gb|EDW93166.1| GE20743 [Drosophila yakuba]
Length = 1987
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1656 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1686
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1687 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1741
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1742 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1772
>gi|386770806|ref|NP_001246672.1| grunge, isoform G [Drosophila melanogaster]
gi|383291815|gb|AFH04343.1| grunge, isoform G [Drosophila melanogaster]
Length = 2006
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1657 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1687
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1688 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1742
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1743 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1773
>gi|194865888|ref|XP_001971653.1| GG14314 [Drosophila erecta]
gi|190653436|gb|EDV50679.1| GG14314 [Drosophila erecta]
Length = 1985
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1654 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1684
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1685 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1739
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1740 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1770
>gi|442631042|ref|NP_001261580.1| grunge, isoform I [Drosophila melanogaster]
gi|440215488|gb|AGB94275.1| grunge, isoform I [Drosophila melanogaster]
Length = 1983
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1652 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1682
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1683 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1737
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1738 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1768
>gi|195375883|ref|XP_002046727.1| GJ13040 [Drosophila virilis]
gi|194153885|gb|EDW69069.1| GJ13040 [Drosophila virilis]
Length = 2099
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 1816 EPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVTDSK 1875
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1876 LARKREERDRKLAE 1889
>gi|195125796|ref|XP_002007361.1| GI12899 [Drosophila mojavensis]
gi|193918970|gb|EDW17837.1| GI12899 [Drosophila mojavensis]
Length = 2102
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 1819 EPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVTDSK 1878
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1879 LARKREERDRKLAE 1892
>gi|194748983|ref|XP_001956920.1| GF24326 [Drosophila ananassae]
gi|190624202|gb|EDV39726.1| GF24326 [Drosophila ananassae]
Length = 1957
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 1672 EPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSK 1731
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1732 LARKREERDRKLAE 1745
>gi|350398432|ref|XP_003485192.1| PREDICTED: hypothetical protein LOC100746481 isoform 2 [Bombus
impatiens]
Length = 1386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 5/73 (6%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
E+EE PSP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDS
Sbjct: 1041 EQEEPPSP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDS 1095
Query: 351 KLARKREERLRKQ 363
KLARKREER RKQ
Sbjct: 1096 KLARKREERSRKQ 1108
>gi|340724938|ref|XP_003400835.1| PREDICTED: hypothetical protein LOC100643422 isoform 2 [Bombus
terrestris]
Length = 1386
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 5/73 (6%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
E+EE PSP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDS
Sbjct: 1041 EQEEPPSP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDS 1095
Query: 351 KLARKREERLRKQ 363
KLARKREER RKQ
Sbjct: 1096 KLARKREERSRKQ 1108
>gi|350398430|ref|XP_003485191.1| PREDICTED: hypothetical protein LOC100746481 isoform 1 [Bombus
impatiens]
Length = 1479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 5/73 (6%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
E+EE PSP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDS
Sbjct: 1041 EQEEPPSP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDS 1095
Query: 351 KLARKREERLRKQ 363
KLARKREER RKQ
Sbjct: 1096 KLARKREERSRKQ 1108
>gi|340724936|ref|XP_003400834.1| PREDICTED: hypothetical protein LOC100643422 isoform 1 [Bombus
terrestris]
Length = 1479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 5/73 (6%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
E+EE PSP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDS
Sbjct: 1041 EQEEPPSP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDS 1095
Query: 351 KLARKREERLRKQ 363
KLARKREER RKQ
Sbjct: 1096 KLARKREERSRKQ 1108
>gi|328782812|ref|XP_392608.4| PREDICTED: hypothetical protein LOC409084 [Apis mellifera]
Length = 1480
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 63/73 (86%), Gaps = 5/73 (6%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
E+EE PSP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDS
Sbjct: 1042 EQEEPPSP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDS 1096
Query: 351 KLARKREERLRKQ 363
KLARKREER RKQ
Sbjct: 1097 KLARKREERSRKQ 1109
>gi|427783743|gb|JAA57323.1| Putative arginine-glutamic acid dipeptide repeat protein
[Rhipicephalus pulchellus]
Length = 1509
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 304 RGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQ 363
RGPSPEPK+EDSECHRSQSAIFLRHW+RG++NSC RTDLTFKPVPDSKLARKREER RK
Sbjct: 1033 RGPSPEPKVEDSECHRSQSAIFLRHWSRGEFNSCARTDLTFKPVPDSKLARKREERARKA 1092
Query: 364 AE 365
AE
Sbjct: 1093 AE 1094
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 169 PACLCYQLEL----EHLEREKREREIRELRERELNDRIKEDLIKNASRP--FDPHWLELQ 222
P L YQL + RE R EL +REL D++K +L + P +DPHWLELQ
Sbjct: 1200 PMMLHYQLGMYAAAAAASRENSLRLDLELEKRELQDKLKAELELKSRLPQAYDPHWLELQ 1259
Query: 223 R 223
R
Sbjct: 1260 R 1260
>gi|21483586|gb|AAM52768.1| SD07343p [Drosophila melanogaster]
Length = 1153
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 868 EPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSK 927
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 928 LARKREERDRKLAE 941
>gi|195326011|ref|XP_002029724.1| GM25056 [Drosophila sechellia]
gi|194118667|gb|EDW40710.1| GM25056 [Drosophila sechellia]
Length = 1957
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH L+ S +DALRAHA +A GM GH
Sbjct: 1632 PHGLK-PTSHMDALRAHAHSANSA------GMGGGH----------------------HP 1662
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+IPRGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1663 TEPLPID-----IEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1717
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1718 NSCTRTDLIFKPVADSKLARKREERDRKLAE 1748
>gi|307195675|gb|EFN77517.1| Arginine-glutamic acid dipeptide repeats protein [Harpegnathos
saltator]
Length = 1535
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 285 EGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTF 344
E M+PE +E SP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL F
Sbjct: 1070 EQDMEPEPDEPASP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLVF 1124
Query: 345 KPVPDSKLARKREERLRK 362
KPVPDSKLARKREER RK
Sbjct: 1125 KPVPDSKLARKREERTRK 1142
>gi|241841425|ref|XP_002415339.1| grunge, putative [Ixodes scapularis]
gi|215509551|gb|EEC19004.1| grunge, putative [Ixodes scapularis]
Length = 905
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 60/66 (90%)
Query: 300 HHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREER 359
+ RGPSPEPK+EDSECHRSQSAIFLRHW+RG++NSC RTDLTFKPVPDSKLARKREER
Sbjct: 489 QQLVRGPSPEPKVEDSECHRSQSAIFLRHWSRGEFNSCARTDLTFKPVPDSKLARKREER 548
Query: 360 LRKQAE 365
RK AE
Sbjct: 549 ARKAAE 554
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 169 PACLCYQLELEHLEREKREREIR---ELRERELNDRIKEDLIKNASRP--FDPHWLELQR 223
P L YQL + +R E+ +REL+D++K +L + P +DPHWLELQR
Sbjct: 675 PMMLHYQLGMYAAAAAASRENMRLDLEMEKRELHDKLKAELELKSRLPAAYDPHWLELQR 734
>gi|195013834|ref|XP_001983914.1| GH15305 [Drosophila grimshawi]
gi|193897396|gb|EDV96262.1| GH15305 [Drosophila grimshawi]
Length = 2048
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 92/151 (60%), Gaps = 34/151 (22%)
Query: 216 PHWLELQRSSLDALRAHALAAALHSPLPPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVK 275
PH ++ S +DALRAHA +A +AG MGG H
Sbjct: 1721 PHGMKPTISHMDALRAHAHSAN----------SAG--------MGGPHH----------P 1752
Query: 276 HEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDY 334
E L I ++P+ E EIPSP H+I RGPSPE K +D+ECHRSQSAIF+RH +RGDY
Sbjct: 1753 TEPLPIE-----IEPDPEPEIPSPTHNIQRGPSPEAKPDDTECHRSQSAIFVRHIDRGDY 1807
Query: 335 NSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
NSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 1808 NSCTRTDLIFKPVTDSKLARKREERDRKLAE 1838
>gi|383865687|ref|XP_003708304.1| PREDICTED: uncharacterized protein LOC100881804 [Megachile rotundata]
Length = 1494
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 57/61 (93%)
Query: 303 PRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PRGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDSKLARKREER RK
Sbjct: 1063 PRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRK 1122
Query: 363 Q 363
Q
Sbjct: 1123 Q 1123
>gi|322797563|gb|EFZ19607.1| hypothetical protein SINV_12573 [Solenopsis invicta]
Length = 1430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 63/78 (80%), Gaps = 5/78 (6%)
Query: 285 EGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTF 344
E + PE EE SP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL F
Sbjct: 1070 EQDLDPEPEESISP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMF 1124
Query: 345 KPVPDSKLARKREERLRK 362
KPVPDSKLARKREER RK
Sbjct: 1125 KPVPDSKLARKREERSRK 1142
>gi|332031345|gb|EGI70858.1| Arginine-glutamic acid dipeptide repeats protein [Acromyrmex
echinatior]
Length = 1528
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 63/78 (80%), Gaps = 5/78 (6%)
Query: 285 EGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTF 344
E + PE EE SP RGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL F
Sbjct: 1077 EQDLDPEPEEPISP-----RGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMF 1131
Query: 345 KPVPDSKLARKREERLRK 362
KPVPDSKLARKREER RK
Sbjct: 1132 KPVPDSKLARKREERSRK 1149
>gi|307174130|gb|EFN64788.1| Arginine-glutamic acid dipeptide repeats protein [Camponotus
floridanus]
Length = 1546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 56/60 (93%)
Query: 303 PRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PRGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDL FKPVPDSKLARKREER RK
Sbjct: 1111 PRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRK 1170
>gi|198465902|ref|XP_001353812.2| GA19989 [Drosophila pseudoobscura pseudoobscura]
gi|198150363|gb|EAL29547.2| GA19989 [Drosophila pseudoobscura pseudoobscura]
Length = 2085
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 63/74 (85%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
E +IPSP H+I RGPSPE K +D+ECHRSQSAIF+RH +RGDYNSC RTDL FKPV DSK
Sbjct: 1803 EPDIPSPTHNIQRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSK 1862
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1863 LARKREERDRKLAE 1876
>gi|170041577|ref|XP_001848534.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865140|gb|EDS28523.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1943
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
+ E PSP H + RGPSPE K +D+ECHRSQSAIF+R +RGDYNSCCRTDL FKP PDSK
Sbjct: 1591 DPEPPSPVHDMNRGPSPEAKPDDTECHRSQSAIFVRRCDRGDYNSCCRTDLEFKPTPDSK 1650
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 1651 LARKREERDRKLAE 1664
>gi|158296285|ref|XP_316705.4| AGAP006669-PA [Anopheles gambiae str. PEST]
gi|157016438|gb|EAA11497.4| AGAP006669-PA [Anopheles gambiae str. PEST]
Length = 2482
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 60/74 (81%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSK 351
+ E PSP H + RGPSPE K +D+ECHRSQSAIF+R +RGDYNSC RTDL FKP PDSK
Sbjct: 2004 DPEPPSPVHDMNRGPSPEAKPDDTECHRSQSAIFVRRCDRGDYNSCTRTDLEFKPTPDSK 2063
Query: 352 LARKREERLRKQAE 365
LARKREER RK AE
Sbjct: 2064 LARKREERDRKLAE 2077
>gi|321461050|gb|EFX72086.1| hypothetical protein DAPPUDRAFT_308596 [Daphnia pulex]
Length = 1630
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Query: 292 EEEIPSP-PHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
+E+ PSP + IPRGPSPEP+IEDSECHRSQSAIFLRHWNRG+ NSC RTDLTFKPVPDS
Sbjct: 1087 DEDAPSPVANTIPRGPSPEPRIEDSECHRSQSAIFLRHWNRGEGNSCARTDLTFKPVPDS 1146
Query: 351 K 351
K
Sbjct: 1147 K 1147
>gi|345483978|ref|XP_001599454.2| PREDICTED: hypothetical protein LOC100114428 [Nasonia vitripennis]
Length = 1773
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 51/54 (94%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQA 364
+IEDSECHRSQSAIFLRHWNRG+ NSC RTDLTFKPVPDSKLARKR+ER RKQA
Sbjct: 1316 RIEDSECHRSQSAIFLRHWNRGENNSCTRTDLTFKPVPDSKLARKRDERSRKQA 1369
>gi|270008439|gb|EFA04887.1| hypothetical protein TcasGA2_TC014949 [Tribolium castaneum]
Length = 1100
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 59/110 (53%), Gaps = 50/110 (45%)
Query: 303 PRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PRGPSPEP++ED+ECHRSQSA
Sbjct: 644 PRGPSPEPRVEDTECHRSQSA--------------------------------------- 664
Query: 363 QAELKIKLFCPVFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
+FLRHWNRGDYNSC RTDLTFKPVPDSKLARKREERLRK
Sbjct: 665 -----------IFLRHWNRGDYNSCTRTDLTFKPVPDSKLARKREERLRK 703
>gi|189238563|ref|XP_968372.2| PREDICTED: similar to atrophin-1 like protein [Tribolium castaneum]
Length = 1618
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 59/110 (53%), Gaps = 50/110 (45%)
Query: 303 PRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PRGPSPEP++ED+ECHRSQSA
Sbjct: 1223 PRGPSPEPRVEDTECHRSQSA--------------------------------------- 1243
Query: 363 QAELKIKLFCPVFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
+FLRHWNRGDYNSC RTDLTFKPVPDSKLARKREERLRK
Sbjct: 1244 -----------IFLRHWNRGDYNSCTRTDLTFKPVPDSKLARKREERLRK 1282
>gi|339252174|ref|XP_003371310.1| putative ELM2 domain protein [Trichinella spiralis]
gi|316968472|gb|EFV52745.1| putative ELM2 domain protein [Trichinella spiralis]
Length = 1125
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Query: 302 IPRGPSPEPKIED-SECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR--EE 358
+P PEPKI+D +ECHRS +AIF RHW RG NSC RTDL F P+PDS LA+KR E
Sbjct: 667 LPAAKEPEPKIDDGTECHRSANAIFRRHWYRGSSNSCSRTDLIFVPLPDSPLAKKRQKEA 726
Query: 359 RLRKQAELK 367
LR+Q E+K
Sbjct: 727 TLRRQTEIK 735
>gi|195588755|ref|XP_002084123.1| GD14095 [Drosophila simulans]
gi|194196132|gb|EDX09708.1| GD14095 [Drosophila simulans]
Length = 829
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 40/47 (85%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F+RH +RGDYNSC RTDL FKPV DSKLARKREER RK AE+ERE R
Sbjct: 600 FVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKLAEKERERR 646
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 35/41 (85%)
Query: 325 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAE 365
F+RH +RGDYNSC RTDL FKPV DSKLARKREER RK AE
Sbjct: 600 FVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKLAE 640
>gi|410899360|ref|XP_003963165.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein-like
[Takifugu rubripes]
Length = 1011
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 304 RGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
R PSPEP I ++ H SQSA F +H +RG YNSC RTD F P+ SKLA+KREE L K
Sbjct: 558 RSPSPEPTIVNTPSHASQSARFYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK 615
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTD F P+ SKLA+KREE L K A+RE E+
Sbjct: 579 FYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK-AKREAEQ 622
>gi|291240045|ref|XP_002739931.1| PREDICTED: metastasis associated 1-like [Saccoglossus kowalevskii]
Length = 1303
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 304 RGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREE 358
R PSPEP + D H S++A F++HWNRG YNSC RTD F P+ +S+LA+KR E
Sbjct: 841 REPSPEPVVVDVPIHSSETARFIKHWNRG-YNSCARTDFIFVPLEESRLAKKRAE 894
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREE 408
F++HWNRG YNSC RTD F P+ +S+LA+KR E
Sbjct: 862 FIKHWNRG-YNSCARTDFIFVPLEESRLAKKRAE 894
>gi|226069448|dbj|BAH36941.1| transcriptional corepressor Atro [Gryllus bimaculatus]
Length = 64
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/42 (95%), Positives = 41/42 (97%)
Query: 383 DYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREEREKA 424
D+NSC RTDLTFKPVPDSKLARKREERLRKQAEREREEREKA
Sbjct: 3 DFNSCTRTDLTFKPVPDSKLARKREERLRKQAEREREEREKA 44
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 333 DYNSCCRTDLTFKPVPDSKLARKREERLRKQA 364
D+NSC RTDLTFKPVPDSKLARKREERLRKQA
Sbjct: 3 DFNSCTRTDLTFKPVPDSKLARKREERLRKQA 34
>gi|292615125|ref|XP_001339825.2| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Danio
rerio]
Length = 1216
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAELKI 368
+ D H SQSA F++H NRG YNSC RTDL F P+ SKLA+KRE ER R++AEL
Sbjct: 779 VVDIPSHASQSARFIKHLNRG-YNSCSRTDLYFTPLTSSKLAKKREEAAERSRREAELSA 837
Query: 369 K 369
+
Sbjct: 838 R 838
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREERE 422
F++H NRG YNSC RTDL F P+ SKLA+KREE AER R E E
Sbjct: 792 FIKHLNRG-YNSCSRTDLYFTPLTSSKLAKKREE----AAERSRREAE 834
>gi|348534279|ref|XP_003454630.1| PREDICTED: hypothetical protein LOC100700408 [Oreochromis
niloticus]
Length = 1196
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERL---RKQAEL 366
I + H SQSA F++H +RG YNSC RTDL F P+P SKLA+KREE + R++AEL
Sbjct: 766 IINMASHASQSARFIKHLDRG-YNSCARTDLFFTPLPSSKLAKKREEAVEKARREAEL 822
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAERERE 419
F++H +RG YNSC RTDL F P+P SKLA+KREE + K A RE E
Sbjct: 779 FIKHLDRG-YNSCARTDLFFTPLPSSKLAKKREEAVEK-ARREAE 821
>gi|147899193|ref|NP_001090596.1| arginine-glutamic acid dipeptide (RE) repeats [Xenopus laevis]
gi|120537386|gb|AAI29058.1| LOC100036839 protein [Xenopus laevis]
Length = 1529
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAELKI 368
+ D+ H SQSA F +HW+RG YNSC RTD F P+ SKLA+KRE E+ +++AE K+
Sbjct: 1063 VVDAPSHASQSARFYKHWDRG-YNSCARTDFYFIPLGGSKLAKKREEAAEKAKREAEQKV 1121
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +HW+RG YNSC RTD F P+ SKLA+KREE K A+RE E++
Sbjct: 1076 FYKHWDRG-YNSCARTDFYFIPLGGSKLAKKREEAAEK-AKREAEQK 1120
>gi|301623929|ref|XP_002941264.1| PREDICTED: hypothetical protein LOC100486351 [Xenopus (Silurana)
tropicalis]
Length = 1099
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
K+ D+ H SQSA F +H +RG YNSCCRTDL F P+ SKL++KR E++ +
Sbjct: 647 KLVDTPSHASQSARFNKHLDRG-YNSCCRTDLYFVPLEGSKLSKKRSEQIER 697
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
F +H +RG YNSCCRTDL F P+ SKL++KR E++ +
Sbjct: 661 FNKHLDRG-YNSCCRTDLYFVPLEGSKLSKKRSEQIER 697
>gi|348514658|ref|XP_003444857.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Oreochromis niloticus]
Length = 1010
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ ++ H SQSA F +H +RG YNSC RTD F P+ SKLA+KREE L K
Sbjct: 566 VVNTPSHASQSARFYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK 615
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTD F P+ SKLA+KREE L K A+RE E+
Sbjct: 579 FYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK-AKREAEQ 622
>gi|432857283|ref|XP_004068619.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein-like
[Oryzias latipes]
Length = 1132
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAEL 366
+ + H SQSA F++H +RG YNSC RTDL F P+ SKLA+KRE ER R++AEL
Sbjct: 707 VVNMASHASQSARFIKHLDRG-YNSCARTDLFFTPLSSSKLAKKREEAVERSRREAEL 763
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREERE 422
F++H +RG YNSC RTDL F P+ SKLA+KREE + ER R E E
Sbjct: 720 FIKHLDRG-YNSCARTDLFFTPLSSSKLAKKREEAV----ERSRREAE 762
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 186 REREIRELRERELNDRIKEDLIKNASRPFDPHWLELQRSSLDALRAHALAAALHSPLPPH 245
RE E+R LREREL +R+K +P D L + ++ L H H P PPH
Sbjct: 877 REHELRNLRERELRERMKPGF---EVKPPDMETLPPSPNPMELLARHGALGLPHMPGPPH 933
Query: 246 GMAAGHPAF 254
AA HP
Sbjct: 934 PFAAFHPGL 942
>gi|432864828|ref|XP_004070437.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein-like
[Oryzias latipes]
Length = 1004
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ ++ H SQSA F +H +RG YNSC RTD F P+ SKLA+KREE L K
Sbjct: 560 VVNTPSHASQSARFYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK 609
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG YNSC RTD F P+ SKLA+KREE L K A+RE E++
Sbjct: 573 FYKHLDRG-YNSCARTDFYFTPLASSKLAKKREEALEK-AKREAEQK 617
>gi|390344983|ref|XP_784961.3| PREDICTED: uncharacterized protein LOC579772 [Strongylocentrotus
purpuratus]
Length = 1968
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 304 RGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQ 363
R PSPEP + D H S SA F+RHW+R + NSC RTDL F P DSK R+ +R RK+
Sbjct: 1272 RSPSPEPMMVDRLLHTSSSAKFIRHWSRRN-NSCSRTDLLFSPREDSKWMRRCRDRERKK 1330
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK-------QAERERE---EREKA 424
F+RHW+R + NSC RTDL F P DSK R+ +R RK +A+RER R++
Sbjct: 1293 FIRHWSRRN-NSCSRTDLLFSPREDSKWMRRCRDRERKKRSSISHEADRERSSSTSRDEK 1351
Query: 425 QASMCNLLSRNPE 437
A + ++R PE
Sbjct: 1352 SAEANDRVARRPE 1364
>gi|410919759|ref|XP_003973351.1| PREDICTED: uncharacterized protein LOC101074077 [Takifugu rubripes]
Length = 1190
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ + H SQSA F++H +RG YNSC RTDL F P+ SKLARKREE + K
Sbjct: 765 VVNMAGHASQSARFIKHLDRG-YNSCARTDLFFTPLSSSKLARKREEAVEK 814
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
F++H +RG YNSC RTDL F P+ SKLARKREE + K
Sbjct: 778 FIKHLDRG-YNSCARTDLFFTPLSSSKLARKREEAVEK 814
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 171 CLCYQLE-LEHLEREKREREIRELRERELNDRIKEDLIKNASRPFDPHWLELQRSSLDAL 229
L Y + L E RERE+R LREREL +R+K +P D L + ++
Sbjct: 920 LLAYHMPGLYSAEPSLRERELRNLRERELRERMKPGF---EVKPPDLETLHPSANPMEHF 976
Query: 230 RAHALAAALHSPLPPHGMAAGHPAF 254
H A H P PPH A HP
Sbjct: 977 ARHGAIALPHIPGPPHHFAPFHPGL 1001
>gi|410905773|ref|XP_003966366.1| PREDICTED: atrophin-1-like [Takifugu rubripes]
Length = 600
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 291 EEEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDS 350
EE E P+P R PSPEPK D H SQSA F + +RG NSC R+D+ F P+ S
Sbjct: 283 EETESPAP---TLRSPSPEPKPVDIPIHASQSARFHKVLDRGSGNSCARSDVLFVPLDGS 339
Query: 351 KLARKRE---ERLRKQAE 365
KL +KR ER R++ E
Sbjct: 340 KLWKKRNEVIERARREVE 357
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F + +RG NSC R+D+ F P+ SKL +KR E + + A RE E+R
Sbjct: 314 FHKVLDRGSGNSCARSDVLFVPLDGSKLWKKRNEVIER-ARREVEQR 359
>gi|326675023|ref|XP_689905.5| PREDICTED: hypothetical protein LOC561408 [Danio rerio]
Length = 1622
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 297 SPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR 356
SPP + R PSPEPK D H SQSA F R +RG NSC R+D+ F P+ SKL +KR
Sbjct: 920 SPPPVL-RSPSPEPKPVDIPIHASQSARFHRVLDRGSGNSCARSDVLFVPLDGSKLWKKR 978
Query: 357 E---ERLRKQAE 365
ER R++ E
Sbjct: 979 NEAIERARREVE 990
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F R +RG NSC R+D+ F P+ SKL +KR E + + A RE E+R
Sbjct: 947 FHRVLDRGSGNSCARSDVLFVPLDGSKLWKKRNEAIER-ARREVEQR 992
>gi|449485234|ref|XP_002192886.2| PREDICTED: atrophin-1 [Taeniopygia guttata]
Length = 1135
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAELK 367
K+ D H SQSA F +H +RG +NSC RTDL F P+ SKLA+KR E++R++AE K
Sbjct: 690 KVVDVPSHASQSARFNKHLDRG-FNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQK 748
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAERE 417
F +H +RG +NSC RTDL F P+ SKLA+KR E++R++AE++
Sbjct: 704 FNKHLDRG-FNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQK 748
>gi|292627023|ref|XP_001922781.2| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Danio
rerio]
Length = 1296
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
I ++ H SQSA F +H +RG YN+C RTD F P+ SKLA+KREE L K
Sbjct: 855 IVNTPSHASQSARFYKHLDRG-YNTCARTDFYFTPLASSKLAKKREEALEK 904
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YN+C RTD F P+ SKLA+KREE L K A+RE E+
Sbjct: 868 FYKHLDRG-YNTCARTDFYFTPLASSKLAKKREEALEK-AKREAEQ 911
>gi|432909972|ref|XP_004078256.1| PREDICTED: uncharacterized protein LOC101171108 [Oryzias latipes]
Length = 1664
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 297 SPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR 356
SPP + R PSPEPK D H SQSA F + +RG NSC R+D+ F P+ SKL +KR
Sbjct: 975 SPPPVL-RSPSPEPKPVDIPIHASQSARFHKVLDRGSGNSCARSDVVFVPLDGSKLWKKR 1033
Query: 357 E---ERLRKQAE 365
ER R++ E
Sbjct: 1034 NEMIERARREVE 1045
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F + +RG NSC R+D+ F P+ SKL +KR E + + A RE E+R
Sbjct: 1002 FHKVLDRGSGNSCARSDVVFVPLDGSKLWKKRNEMIER-ARREVEQR 1047
>gi|443690400|gb|ELT92538.1| hypothetical protein CAPTEDRAFT_219361 [Capitella teleta]
Length = 1371
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLA 353
I + EC R+++AIF+RHW RG NSC R+D+ F P+PDSKLA
Sbjct: 820 IGNEECLRTKNAIFIRHWCRG-RNSCTRSDVEFVPLPDSKLA 860
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 374 VFLRHWNRGDYNSCCRTDLTFKPVPDSKLA 403
+F+RHW RG NSC R+D+ F P+PDSKLA
Sbjct: 832 IFIRHWCRG-RNSCTRSDVEFVPLPDSKLA 860
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 12/60 (20%)
Query: 175 QLELEHLEREKREREIRE--LRERELNDRIKE---------DLIKNASRPFDPHWLELQR 223
+LE+E LER+KRER+ RE LRE E +++K+ D + + P DPHW+ELQR
Sbjct: 1001 RLEME-LERDKRERDARERELREMEFREKMKQEMDLKPPGFDRLPPGANPLDPHWVELQR 1059
>gi|363741840|ref|XP_417594.3| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Gallus
gallus]
Length = 1524
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG YNSC R DL F P+ SKLA+KREE + K
Sbjct: 1078 VVDTPSHASQSARFYKHLDRG-YNSCSRADLYFMPLAGSKLAKKREEAIEK 1127
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC R DL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1091 FYKHLDRG-YNSCSRADLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1134
>gi|995557|emb|CAA61623.1| DRPLA [Rattus norvegicus]
Length = 1182
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAE 365
K+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR E++R++AE
Sbjct: 745 KVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAE 801
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 759 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 803
>gi|47229719|emb|CAG06915.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1302
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ + H SQSA F++H +RG YNSC R DL F P+ SKLARKREE + K
Sbjct: 717 VVNMAGHASQSARFIKHLDRG-YNSCARADLFFTPLSSSKLARKREEAVEK 766
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
F++H +RG YNSC R DL F P+ SKLARKREE + K
Sbjct: 730 FIKHLDRG-YNSCARADLFFTPLSSSKLARKREEAVEK 766
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 172 LCYQLE-LEHLEREKREREIRELRERELNDRIKEDLIKNASRPFDPHWLELQRSSLDALR 230
L Y + L E RERE+R LREREL +R+K +P D L + ++
Sbjct: 869 LAYHMPGLYTAEPSLRERELRNLRERELRERMKPGF---EVKPPDLETLHPSANPMEHFA 925
Query: 231 AHALAAALHSPLPPHGMAAGHPAF 254
H A H P PPH A HP
Sbjct: 926 RHGAIALPHIPGPPHHFAPFHPGL 949
>gi|326912721|ref|XP_003202695.1| PREDICTED: atrophin-1-like [Meleagris gallopavo]
Length = 850
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 310 PKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAEL 366
PK+ D H SQSA F +H +RG +NSC RTDL F P+ SKLA+KR E++R++AE
Sbjct: 404 PKVVDVPSHASQSARFNKHLDRG-FNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQ 462
Query: 367 K 367
K
Sbjct: 463 K 463
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAERE 417
F +H +RG +NSC RTDL F P+ SKLA+KR E++R++AE++
Sbjct: 419 FNKHLDRG-FNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQK 463
>gi|28972231|dbj|BAC65569.1| mKIAA0458 protein [Mus musculus]
Length = 882
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 453 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 496
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR--------KREE 358
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+ + E
Sbjct: 440 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 493
>gi|1209103|gb|AAA98970.1| atrophin-1 related protein [Rattus norvegicus]
gi|149024691|gb|EDL81188.1| arginine-glutamic acid dipeptide (RE) repeats, isoform CRA_b
[Rattus norvegicus]
Length = 1006
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 572 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 615
>gi|403272220|ref|XP_003927974.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Saimiri
boliviensis boliviensis]
Length = 1535
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERL----RK 362
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + R+
Sbjct: 1089 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 1142
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1102 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1145
>gi|296206632|ref|XP_002750291.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Callithrix jacchus]
Length = 1558
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERL----RK 362
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + R+
Sbjct: 1112 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 1165
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1125 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1168
>gi|332807549|ref|XP_001159160.2| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform
1 [Pan troglodytes]
Length = 1012
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 579 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 622
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 566 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 615
>gi|4680231|gb|AAD27584.1|AF118275_1 atrophin-related protein ARP [Homo sapiens]
Length = 995
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 562 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 605
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 549 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 598
>gi|112382226|ref|NP_001036147.1| arginine-glutamic acid dipeptide repeats protein isoform b [Homo
sapiens]
gi|3372354|gb|AAC28264.1| atrophin-1 like protein [Homo sapiens]
Length = 1012
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 579 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 622
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 566 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 615
>gi|3411015|gb|AAC31120.1| atrophin-1 related protein [Homo sapiens]
Length = 1012
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 579 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 622
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 566 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 615
>gi|355716141|gb|AES05515.1| arginine-glutamic acid dipeptide repeats [Mustela putorius furo]
Length = 962
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 678 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 721
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPH--------GLGMPGVDSVKHEALTISGDEGSMQPEEEE 294
PP G P+ PP + +P V +K EAL + + S P
Sbjct: 603 PPAGPG---PSAQPPCSAAVSSGGSGPGGAACPLPTVQ-IKEEALDDAEEPESPPPPPRS 658
Query: 295 IPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR 354
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+
Sbjct: 659 P-----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAK 706
Query: 355 KREERLRK 362
KREE + K
Sbjct: 707 KREEAIEK 714
>gi|1549217|dbj|BAA13450.1| DRPLA protein [Mus musculus]
Length = 1175
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAE 365
K+ D H SQSA F +H +RG +NSC R+ L F P+ SKLA+KR E++R++AE
Sbjct: 737 KVVDVPSHASQSARFNKHLDRG-FNSCARSTLYFVPLEGSKLAKKRADLVEKVRREAE 793
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+ L F P+ SKLA+KR + L ++ RE E+R
Sbjct: 751 FNKHLDRG-FNSCARSTLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 795
>gi|395526839|ref|XP_003765563.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Sarcophilus harrisii]
Length = 1177
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 303 PRGPSPEPKIEDSEC----HRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREE 358
P PSP+ DS+ QSA F +H +RG YNSC RTDL F P+ SKLA+KREE
Sbjct: 718 PSIPSPQDNESDSDSSAQQQVVQSARFYKHLDRG-YNSCARTDLYFMPLSGSKLAKKREE 776
Query: 359 RLRK 362
+ K
Sbjct: 777 AIEK 780
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 744 FYKHLDRG-YNSCARTDLYFMPLSGSKLAKKREEAIEK-AKREAEQ 787
>gi|348571421|ref|XP_003471494.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein-like
[Cavia porcellus]
Length = 1543
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 256 PPEMGGLPHGLGMPGVD-------SVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPSP 308
PP LP G PG +K EAL + + S P SP
Sbjct: 1045 PPCSATLPSGGNTPGAAPCPLPTVQIKEEALDDAEEPESPPPPPRSP-----------SP 1093
Query: 309 EPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
EP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1094 EPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAVEK 1146
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 412
F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1110 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAVEK 1146
>gi|119592005|gb|EAW71599.1| arginine-glutamic acid dipeptide (RE) repeats, isoform CRA_b [Homo
sapiens]
Length = 1298
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 865 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 908
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 852 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 901
>gi|395840909|ref|XP_003793294.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 1
[Otolemur garnettii]
gi|395840911|ref|XP_003793295.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 2
[Otolemur garnettii]
Length = 1556
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1123 FYKHLDRG-YNSCARTDLNFMPLAGSKLAKKREEAIEK-AKREAEQ 1166
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 256 PPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPSP 308
PP + G +P S +K EAL + + S P SP
Sbjct: 1058 PPCAAAVSSGGSVPAGASCQLPTVQIKEEALDDAEEPESPPPPPRSP-----------SP 1106
Query: 309 EPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
EP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1107 EPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLNFMPLAGSKLAKKREEAIEK 1159
>gi|354499090|ref|XP_003511644.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Cricetulus griseus]
Length = 1635
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVKHEALTI---SGDEGSMQPEEEEIPSPP 299
PP G +A PP + G +PG S A+ I + DE P P
Sbjct: 1047 PPAGPSASS---QPPCPAAVSSGGSVPGAPSCPLPAVQIKEEALDEAEEPESPPPPPRSP 1103
Query: 300 HHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREER 359
EP I D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE
Sbjct: 1104 SP-------EPTIVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEA 1155
Query: 360 LRK 362
+ K
Sbjct: 1156 IEK 1158
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1122 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1165
>gi|168273000|dbj|BAG10339.1| arginine-glutamic acid dipeptide repeats protein [synthetic
construct]
Length = 1268
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 835 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 878
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 822 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 871
>gi|158341662|ref|NP_446337.2| arginine-glutamic acid dipeptide repeats protein [Rattus norvegicus]
gi|85681043|sp|Q62901.2|RERE_RAT RecName: Full=Arginine-glutamic acid dipeptide repeats protein;
AltName: Full=Atrophin-1-related protein
gi|149024690|gb|EDL81187.1| arginine-glutamic acid dipeptide (RE) repeats, isoform CRA_a [Rattus
norvegicus]
Length = 1559
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1125 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1168
>gi|148234285|ref|NP_001078961.1| arginine-glutamic acid dipeptide repeats protein [Mus musculus]
gi|341942159|sp|Q80TZ9.3|RERE_MOUSE RecName: Full=Arginine-glutamic acid dipeptide repeats protein;
AltName: Full=Atrophin-2
gi|189442147|gb|AAI67217.1| Arginine glutamic acid dipeptide (RE) repeats [synthetic construct]
Length = 1558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1125 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1168
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR--------KREE 358
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+ + E
Sbjct: 1112 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 1165
>gi|417406592|gb|JAA49946.1| Putative transcriptional corepressor atrophin-1/drpla [Desmodus
rotundus]
Length = 1545
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1111 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1154
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 260 GGLPHGLGMP-GVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPSPEPKIEDSECH 318
G P G P +K EAL + + S P SPEP + D+ H
Sbjct: 1056 GSTPGGAACPLPTVQIKEEALDDAEEPESPPPPPRSP-----------SPEPTVVDTPSH 1104
Query: 319 RSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1105 ASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1147
>gi|194674085|ref|XP_001790470.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Bos
taurus]
gi|297484116|ref|XP_002694095.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Bos
taurus]
gi|296479191|tpg|DAA21306.1| TPA: metastasis-associated protein 2-like [Bos taurus]
Length = 1545
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1112 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1155
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG + +K EAL + + S P
Sbjct: 1037 PPAGSG---PSAQPPCSAAVSSGGSVPGGATCPLPTVQIKEEALDDAEEPESPPPPPRSP 1093
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 1094 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 1141
Query: 356 REERLRK 362
REE + K
Sbjct: 1142 REEAIEK 1148
>gi|194208085|ref|XP_001915565.1| PREDICTED: LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide
repeats protein [Equus caballus]
Length = 1551
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1118 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1161
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPG-------VDSVKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG +K EAL + + S P
Sbjct: 1043 PPAGPG---PSAQPPCSAAVSSGGSVPGGAACPLPTVQIKEEALDDTEEPESPPPPPRSP 1099
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 1100 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 1147
Query: 356 REERLRK 362
REE + K
Sbjct: 1148 REEAIEK 1154
>gi|148682942|gb|EDL14889.1| mCG130721 [Mus musculus]
Length = 1559
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1125 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1168
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR--------KREE 358
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+ + E
Sbjct: 1112 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 1165
>gi|114552678|ref|XP_001159462.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 6
[Pan troglodytes]
gi|114552680|ref|XP_001159509.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 7
[Pan troglodytes]
gi|410258224|gb|JAA17079.1| arginine-glutamic acid dipeptide (RE) repeats [Pan troglodytes]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1068 PPCSGAVASGGSIAGGSSCPLPTVQ-IKEEALDDAEEPESPPPPPRSP-----------S 1115
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1116 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|410225798|gb|JAA10118.1| arginine-glutamic acid dipeptide (RE) repeats [Pan troglodytes]
gi|410308464|gb|JAA32832.1| arginine-glutamic acid dipeptide (RE) repeats [Pan troglodytes]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1068 PPCSGAVASGGSIAGGSSCPLPTVQ-IKEEALDDAEEPESPPPPPRSP-----------S 1115
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1116 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|397503100|ref|XP_003822173.1| PREDICTED: LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide
repeats protein [Pan paniscus]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1068 PPCSGAVASGGSIAGGSSCPLPTVQ-IKEEALDDAEEPESPPPPPRSP-----------S 1115
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1116 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|388454392|ref|NP_001252591.1| arginine-glutamic acid dipeptide repeats protein [Macaca mulatta]
gi|387540354|gb|AFJ70804.1| arginine-glutamic acid dipeptide repeats protein isoform a [Macaca
mulatta]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|426327685|ref|XP_004024643.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Gorilla
gorilla gorilla]
Length = 1528
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1095 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1138
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1030 PPCSGAVASGGSIAGGSSCPLPTVQ-IKEEALDDTEEPESPPPPPRSP-----------S 1077
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1078 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1131
>gi|402852828|ref|XP_003891113.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein [Papio
anubis]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|344247174|gb|EGW03278.1| Arginine-glutamic acid dipeptide repeats protein [Cricetulus griseus]
Length = 1473
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 969 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1012
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDSVKHEALTI---SGDEGSMQPEEEEIPSPP 299
PP G +A PP + G +PG S A+ I + DE P P
Sbjct: 894 PPAGPSASS---QPPCPAAVSSGGSVPGAPSCPLPAVQIKEEALDEAEEPESPPPPPRSP 950
Query: 300 HHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREER 359
EP I D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE
Sbjct: 951 SP-------EPTIVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEA 1002
Query: 360 LRK 362
+ K
Sbjct: 1003 IEK 1005
>gi|71891659|dbj|BAA32303.3| KIAA0458 protein [Homo sapiens]
Length = 1552
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1119 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1162
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1106 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1155
>gi|332250427|ref|XP_003274352.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 1
[Nomascus leucogenys]
gi|332250429|ref|XP_003274353.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 2
[Nomascus leucogenys]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1068 PPCSGAVASGGSIAGGSSCPLPTVQ-IKEEALDDAEEPESPPPPPRSP-----------S 1115
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1116 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|297666546|ref|XP_002811584.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 1
[Pongo abelii]
gi|297666548|ref|XP_002811585.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 2
[Pongo abelii]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 256 PPEMGGLPHGLG--------MPGVDSVKHEALTISGDEGSMQPEEEEIPSPPHHIPRGPS 307
PP G + G +P V +K EAL + + S P S
Sbjct: 1068 PPCSGAVASGGSIAGGSSCPVPTVQ-IKEEALDDAEEPESPPPPPRSP-----------S 1115
Query: 308 PEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
PEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KREE + K
Sbjct: 1116 PEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|112382216|ref|NP_036234.3| arginine-glutamic acid dipeptide repeats protein isoform a [Homo
sapiens]
gi|112382224|ref|NP_001036146.1| arginine-glutamic acid dipeptide repeats protein isoform a [Homo
sapiens]
gi|85540730|sp|Q9P2R6.2|RERE_HUMAN RecName: Full=Arginine-glutamic acid dipeptide repeats protein;
AltName: Full=Atrophin-1-like protein; AltName:
Full=Atrophin-1-related protein
gi|119592004|gb|EAW71598.1| arginine-glutamic acid dipeptide (RE) repeats, isoform CRA_a [Homo
sapiens]
gi|119592006|gb|EAW71600.1| arginine-glutamic acid dipeptide (RE) repeats, isoform CRA_a [Homo
sapiens]
gi|189442426|gb|AAI67857.1| Arginine-glutamic acid dipeptide (RE) repeats [synthetic construct]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|73956708|ref|XP_536734.2| PREDICTED: arginine-glutamic acid dipeptide repeats protein isoform 1
[Canis lupus familiaris]
Length = 1548
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1115 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1158
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG + +K EAL + + S P
Sbjct: 1040 PPAGPG---PSAQPPCSAAVSSGGSIPGGTACPLPTVQIKEEALDDAEEPESPPPPPRSP 1096
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 1097 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 1144
Query: 356 REERLRK 362
REE + K
Sbjct: 1145 REEAIEK 1151
>gi|8096340|dbj|BAA95898.1| RERE [Homo sapiens]
Length = 1566
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|384947238|gb|AFI37224.1| arginine-glutamic acid dipeptide repeats protein isoform a [Macaca
mulatta]
Length = 1212
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1176
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|281343158|gb|EFB18742.1| hypothetical protein PANDA_007226 [Ailuropoda melanoleuca]
Length = 1500
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1072 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1115
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG + +K EAL + + S P
Sbjct: 997 PPAGPG---PSAQPPCSAAVSSGGSVPGGTACPLPTVQIKEEALDDAEEPESPPPPPRSP 1053
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 1054 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 1101
Query: 356 REERLRK 362
REE + K
Sbjct: 1102 REEAIEK 1108
>gi|301766604|ref|XP_002918728.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein-like
[Ailuropoda melanoleuca]
Length = 1515
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1087 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1130
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG + +K EAL + + S P
Sbjct: 1012 PPAGPG---PSAQPPCSAAVSSGGSVPGGTACPLPTVQIKEEALDDAEEPESPPPPPRSP 1068
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 1069 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 1116
Query: 356 REERLRK 362
REE + K
Sbjct: 1117 REEAIEK 1123
>gi|126330575|ref|XP_001364476.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Monodelphis domestica]
Length = 1561
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1127 FYKHLDRG-YNSCARTDLYFMPLSGSKLAKKREEAIEK-AKREAEQ 1170
>gi|444728217|gb|ELW68681.1| Arginine-glutamic acid dipeptide repeats protein [Tupaia chinensis]
Length = 1557
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1069 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1112
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 11/58 (18%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR----------EER 359
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+KR E+
Sbjct: 1056 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQ 1112
>gi|440908549|gb|ELR58553.1| Arginine-glutamic acid dipeptide repeats protein [Bos grunniens
mutus]
Length = 1379
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 955 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 998
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 243 PPHGMAAGHPAFLPPEMGGLPHGLGMPGVDS-------VKHEALTISGDEGSMQPEEEEI 295
PP G P+ PP + G +PG + +K EAL + + S P
Sbjct: 880 PPAGSG---PSAQPPCSAAVSSGGSVPGGATCPLPTVQIKEEALDDAEEPESPPPLPRSP 936
Query: 296 PSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARK 355
SPEP + D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+K
Sbjct: 937 -----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKK 984
Query: 356 REERLRK 362
REE + K
Sbjct: 985 REEAIEK 991
>gi|410966184|ref|XP_003989614.1| PREDICTED: LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide
repeats protein [Felis catus]
Length = 1372
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE E+
Sbjct: 939 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKREAEQ 982
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR--------KREE 358
+ D+ H SQSA F +H +RG YNSC RTDL F P+ SKLA+ + E
Sbjct: 926 VVDTPSHASQSARFYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEKAKRE 979
>gi|351713739|gb|EHB16658.1| Arginine-glutamic acid dipeptide repeats protein [Heterocephalus
glaber]
Length = 1539
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTDL F P+ SKL++KREE + K A+RE E+
Sbjct: 1108 FYKHLDRG-YNSCARTDLYFMPLAGSKLSKKREEAIEK-AKREAEQ 1151
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 325 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
F +H +RG YNSC RTDL F P+ SKL++KREE + K
Sbjct: 1108 FYKHLDRG-YNSCARTDLYFMPLAGSKLSKKREEAIEK 1144
>gi|380792351|gb|AFE68051.1| arginine-glutamic acid dipeptide repeats protein isoform a, partial
[Macaca mulatta]
Length = 1192
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAERE 417
F +H +RG YNSC RTDL F P+ SKLA+KREE + K A+RE
Sbjct: 1133 FYKHLDRG-YNSCARTDLYFMPLAGSKLAKKREEAIEK-AKRE 1173
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 312 IEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKREERLRK 362
+ D+ H SQSA F +H +RG RTDL F P+ SKLA+KREE + K
Sbjct: 1120 VVDTPSHASQSARFYKHLDRGYNSC-----ARTDLYFMPLAGSKLAKKREEAIEK 1169
>gi|432098148|gb|ELK28035.1| Arginine-glutamic acid dipeptide repeat protein [Myotis davidii]
Length = 1453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC R DL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1029 FYKHLDRG-YNSCARADLYFMPLAGSKLAKKREEAIEK-AKREAEQ 1072
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 240 SPLPPHGMAAGHPAFLPPEMGG-LPHGLGMP-GVDSVKHEALTISGDEGSMQPEEEEIPS 297
+PL G +A P GG P G P +K EAL + + S P
Sbjct: 953 TPLTGPGPSAQPPCSAAVSSGGSTPVGAACPLPTVQIKEEALDDAEEPESPPPPPRSP-- 1010
Query: 298 PPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE 357
SPEP + D+ H SQSA F +H +RG YNSC R DL F P+ SKLA+KRE
Sbjct: 1011 ---------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARADLYFMPLAGSKLAKKRE 1060
Query: 358 ERLRK 362
E + K
Sbjct: 1061 EAIEK 1065
>gi|195171371|ref|XP_002026480.1| GL15500 [Drosophila persimilis]
gi|194111386|gb|EDW33429.1| GL15500 [Drosophila persimilis]
Length = 590
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 292 EEEIPSPPHHIPRGPSPEPKIEDSECHRSQSAIFL 326
E +IPSP H+I RGPSPE K +D+ECHRSQSA+ L
Sbjct: 495 EPDIPSPTHNIQRGPSPEAKPDDTECHRSQSAMEL 529
>gi|431906359|gb|ELK10556.1| Arginine-glutamic acid dipeptide repeat protein [Pteropus alecto]
Length = 1566
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC R DL F P+ SKLA+KREE + K A+RE E+
Sbjct: 1224 FYKHLDRG-YNSCARADLYFMPLAGSKLAKKREEAVEK-AKREAEQ 1267
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 24/128 (18%)
Query: 243 PPHGMAAGHPAFLPP------EMGGLPHGLG--MPGVDSVKHEALTISGDEGSMQPEEEE 294
PP G P+ PP G P G+ +P V +K EAL + + S P
Sbjct: 1149 PPAGPG---PSAQPPCPATVSSGGSTPGGVACPLPAVQ-IKEEALDDAEEPESPPPPPRS 1204
Query: 295 IPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR 354
SPEP + D+ H SQSA F +H +RG YNSC R DL F P+ SKLA+
Sbjct: 1205 P-----------SPEPTVVDTPSHASQSARFYKHLDRG-YNSCARADLYFMPLAGSKLAK 1252
Query: 355 KREERLRK 362
KREE + K
Sbjct: 1253 KREEAVEK 1260
>gi|47228791|emb|CAG07523.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1677
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC RTD F P+ SKLA+KREE +++A+RE E+
Sbjct: 1081 FYKHLDRG-YNSCARTDFYFTPLASSKLAKKREE-AQEKAKREAEQ 1124
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 243 PPHGMAAGHP--AFLPPEMGGLPHGLG-MPGV------DSVKHEALTISGDEGSMQPEEE 293
PP A HP A L P G P G M GV ++ + G P
Sbjct: 977 PPQPPFATHPFSAVL-PAAGPPPSSSGSMAGVPPPSSSAPSSSISMPLPASVGCAGPGPA 1035
Query: 294 EIPSPPHHIPRGP-----------------SPEPKIEDSECHRSQSAIFLRHWNRGDYNS 336
PP HI P SPEP + ++ H SQSA F +H +RG YNS
Sbjct: 1036 L---PPIHIKEEPLDEAEEPESPPPPQRSPSPEPTVVNTPSHASQSARFYKHLDRG-YNS 1091
Query: 337 CCRTDLTFKPVPDSKLARKREE 358
C RTD F P+ SKLA+KREE
Sbjct: 1092 CARTDFYFTPLASSKLAKKREE 1113
>gi|224079999|ref|XP_002187508.1| PREDICTED: arginine-glutamic acid dipeptide repeats protein
[Taeniopygia guttata]
Length = 1222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREE 420
F +H +RG YNSC R DL F P+ SKLA+KREE + K A+RE E+
Sbjct: 789 FYKHLDRG-YNSCSRADLYFMPLAGSKLAKKREEAIEK-AKREAEQ 832
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 325 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRK 362
F +H +RG YNSC R DL F P+ SKLA+KREE + K
Sbjct: 789 FYKHLDRG-YNSCSRADLYFMPLAGSKLAKKREEAIEK 825
>gi|351715711|gb|EHB18630.1| Atrophin-1 [Heterocephalus glaber]
Length = 1098
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 12/60 (20%)
Query: 311 KIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR-----------EER 359
K+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR E+R
Sbjct: 662 KVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQR 720
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 676 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 720
>gi|426227018|ref|XP_004007627.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1 [Ovis aries]
Length = 1209
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 311 KIEDSECH-RSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAE 365
K+ D H S F +H +RG +NSC R+DL F P+ SKLA+KR E++R++AE
Sbjct: 746 KVVDVPAHATSAPGRFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAE 803
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 761 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 805
>gi|363728274|ref|XP_425518.3| PREDICTED: atrophin-1 [Gallus gallus]
Length = 1201
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAERE 417
F +H +RG +NSC RTDL F P+ SKLA+KR E++R++AE++
Sbjct: 770 FNKHLDRG-FNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQK 814
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 12/64 (18%)
Query: 311 KIEDSECHRSQSAIFLRHWNRG----DYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQ 363
K+ D H SQSA F +H +RG RTDL F P+ SKLA+KR E++R++
Sbjct: 756 KVVDVPSHASQSARFNKHLDRGFNSC-----SRTDLYFVPLDGSKLAKKRADLVEKVRRE 810
Query: 364 AELK 367
AE K
Sbjct: 811 AEQK 814
>gi|344277842|ref|XP_003410706.1| PREDICTED: atrophin-1-like [Loxodonta africana]
Length = 1187
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 763 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 807
>gi|297261690|ref|XP_001118307.2| PREDICTED: atrophin-1 [Macaca mulatta]
Length = 973
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + + K RE E+R
Sbjct: 731 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEK-VRREAEQR 775
>gi|334349985|ref|XP_003342299.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1-like [Monodelphis
domestica]
Length = 1206
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 782 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 826
>gi|417406081|gb|JAA49717.1| Putative transcriptional corepressor atrophin-1/drpla [Desmodus
rotundus]
Length = 1187
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 763 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 807
>gi|440895673|gb|ELR47811.1| Atrophin-1, partial [Bos grunniens mutus]
Length = 1137
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 724 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 768
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 263 PHGLGM--PGVDSV--------KHEALTISGDEGSMQPEEE-EIPSPPHHIPRGPSPEPK 311
P G G PG +V L+ + +P EE E P P R PSP PK
Sbjct: 651 PAGPGTFKPGSPTVGPGPLPPAGPSGLSSLATQIKQEPAEEYETPESPVPPARSPSPPPK 710
Query: 312 IEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLRKQAE 365
+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR E++R++AE
Sbjct: 711 VVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAE 766
>gi|329664668|ref|NP_001192677.1| atrophin-1 [Bos taurus]
gi|296487136|tpg|DAA29249.1| TPA: atrophin 1 [Bos taurus]
Length = 1184
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 760 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 804
>gi|395847553|ref|XP_003796433.1| PREDICTED: atrophin-1 [Otolemur garnettii]
Length = 1184
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 760 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 804
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 243 PPHGMAA---GHPAFLP---PEMGGLPHGL-GMPGVDSVKHEALTISGDEGSMQPEEE-E 294
PP G G P P P G P GL +P +S + +P EE E
Sbjct: 672 PPAGPGTFKPGSPNVGPGPLPSAG--PSGLSSLPPPPVAPASGPPLSATQIKQEPAEEYE 729
Query: 295 IPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR 354
P P R PSP PK+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+
Sbjct: 730 TPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAK 788
Query: 355 KRE---ERLRKQAE 365
KR E++R++AE
Sbjct: 789 KRADLVEKVRREAE 802
>gi|335288520|ref|XP_003126588.2| PREDICTED: atrophin-1-like [Sus scrofa]
Length = 1182
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 758 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 802
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 250 GHPAF---------------LPPEMGGLPHGLGMPGVDSVKHEALTISGDEGSMQPEEEE 294
G PA LPP G + +K E EE E
Sbjct: 680 GSPAVGPGPLPPAGPSGLSSLPPPTAAPASGPPL-SATQIKQEPA-----------EEYE 727
Query: 295 IPSPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLAR 354
P P R PSP PK+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+
Sbjct: 728 TPESPAPPARSPSPPPKVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAK 786
Query: 355 KRE---ERLRKQAE 365
KR E++R++AE
Sbjct: 787 KRADLVEKVRREAE 800
>gi|34328110|ref|NP_031907.2| atrophin-1 [Mus musculus]
gi|81882128|sp|O35126.1|ATN1_MOUSE RecName: Full=Atrophin-1; AltName:
Full=Dentatorubral-pallidoluysian atrophy protein
homolog
gi|2289904|gb|AAC36003.1| DRPLA [Mus musculus]
gi|31418669|gb|AAH53051.1| Atrophin 1 [Mus musculus]
gi|37574012|gb|AAH50920.2| Atrophin 1 [Mus musculus]
gi|148667338|gb|EDK99754.1| atrophin 1, isoform CRA_a [Mus musculus]
gi|148667339|gb|EDK99755.1| atrophin 1, isoform CRA_a [Mus musculus]
Length = 1175
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 751 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 795
>gi|297690983|ref|XP_002822873.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1 [Pongo abelii]
Length = 1177
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 753 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 797
>gi|158517923|ref|NP_058924.2| atrophin-1 [Rattus norvegicus]
gi|392350609|ref|XP_003750706.1| PREDICTED: atrophin-1-like [Rattus norvegicus]
gi|149049486|gb|EDM01940.1| atrophin 1 [Rattus norvegicus]
Length = 1184
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 760 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 804
>gi|1706520|sp|P54258.1|ATN1_RAT RecName: Full=Atrophin-1; AltName:
Full=Dentatorubral-pallidoluysian atrophy protein
homolog
gi|1049102|gb|AAA80337.1| atrophin-1 [Rattus norvegicus]
Length = 1183
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 759 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 803
>gi|403309002|ref|XP_003944922.1| PREDICTED: atrophin-1 [Saimiri boliviensis boliviensis]
Length = 1183
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 759 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 803
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 252 PAFLPPEMGGLPHGLGMPGVDSVKHEALTISGDEGS------MQPEEE-EIPSPPHHIPR 304
P LPP G GV S+ + +P EE E P P R
Sbjct: 687 PGALPPA--------GPSGVPSLPPPPAAPAAGPPLSATQIKQEPAEEYETPESPVPPAR 738
Query: 305 GPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLR 361
PSP PK+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR E++R
Sbjct: 739 SPSPPPKVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVR 797
Query: 362 KQAE 365
++AE
Sbjct: 798 REAE 801
>gi|291392787|ref|XP_002712961.1| PREDICTED: atrophin-1 [Oryctolagus cuniculus]
Length = 1180
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 756 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 800
>gi|301773716|ref|XP_002922272.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1-like [Ailuropoda
melanoleuca]
Length = 1190
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 766 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 810
>gi|402884968|ref|XP_003905941.1| PREDICTED: atrophin-1 isoform 2 [Papio anubis]
Length = 1184
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 760 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 804
>gi|402884966|ref|XP_003905940.1| PREDICTED: atrophin-1 isoform 1 [Papio anubis]
Length = 1185
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 761 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 805
>gi|332249348|ref|XP_003273825.1| PREDICTED: atrophin-1 [Nomascus leucogenys]
Length = 1179
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 755 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 799
>gi|390467426|ref|XP_003733762.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1 [Callithrix jacchus]
Length = 1182
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 758 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 802
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
Query: 252 PAFLPPEMGGLPHGLGMPGV------DSVKHEALTISGDEGSMQPEEE-EIPSPPHHIPR 304
P LPP G GV + +S + +P EE E P P R
Sbjct: 686 PGALPPA--------GPSGVPSLPPPPAAPASGPPLSATQIKQEPAEEYETPDSPVPPAR 737
Query: 305 GPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKRE---ERLR 361
PSP PK+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR E++R
Sbjct: 738 SPSPPPKVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRADLVEKVR 796
Query: 362 KQAE 365
++AE
Sbjct: 797 REAE 800
>gi|77681491|ref|NP_001029337.1| atrophin-1 [Pan troglodytes]
gi|61212936|sp|Q5IS70.1|ATN1_PANTR RecName: Full=Atrophin-1; AltName:
Full=Dentatorubral-pallidoluysian atrophy protein
homolog
gi|56122290|gb|AAV74296.1| DRPLA protein [Pan troglodytes]
Length = 1186
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 762 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 806
>gi|383416305|gb|AFH31366.1| atrophin-1 [Macaca mulatta]
gi|384945638|gb|AFI36424.1| atrophin-1 [Macaca mulatta]
Length = 1181
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 757 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 801
>gi|119609112|gb|EAW88706.1| atrophin 1, isoform CRA_a [Homo sapiens]
Length = 1189
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 765 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 809
>gi|915326|gb|AAB50276.1| atrophin-1 [Homo sapiens]
Length = 1184
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 760 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 804
>gi|444510899|gb|ELV09746.1| Atrophin-1 [Tupaia chinensis]
Length = 1037
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 615 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 659
>gi|30353865|gb|AAH51795.1| Atrophin 1 [Homo sapiens]
gi|167773201|gb|ABZ92035.1| atrophin 1 [synthetic construct]
Length = 1191
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 767 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 811
>gi|55750041|ref|NP_001931.2| atrophin-1 [Homo sapiens]
gi|55750053|ref|NP_001007027.1| atrophin-1 [Homo sapiens]
gi|317373480|sp|P54259.3|ATN1_HUMAN RecName: Full=Atrophin-1; AltName:
Full=Dentatorubral-pallidoluysian atrophy protein
gi|1732417|gb|AAB51321.1| DRPLA [Homo sapiens]
gi|119609113|gb|EAW88707.1| atrophin 1, isoform CRA_b [Homo sapiens]
Length = 1190
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 766 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 810
>gi|62088270|dbj|BAD92582.1| atrophin-1 variant [Homo sapiens]
Length = 774
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 350 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 394
>gi|862330|dbj|BAA06626.1| DRPLA [Homo sapiens]
Length = 1185
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 761 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 805
>gi|355563941|gb|EHH20441.1| Dentatorubral-pallidoluysian atrophy protein [Macaca mulatta]
Length = 1181
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 757 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 801
>gi|397499137|ref|XP_003845965.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1 [Pan paniscus]
Length = 1186
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 762 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 806
>gi|194211633|ref|XP_001915563.1| PREDICTED: atrophin-1-like [Equus caballus]
Length = 1125
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 701 FHKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 745
>gi|151555738|gb|AAI49149.1| ATN1 protein [Bos taurus]
Length = 690
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 266 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 310
>gi|1732444|dbj|BAA07534.1| DRPLA protein [Homo sapiens]
Length = 1182
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 761 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 805
>gi|119609114|gb|EAW88708.1| atrophin 1, isoform CRA_c [Homo sapiens]
Length = 659
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 235 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 279
>gi|431905364|gb|ELK10409.1| Atrophin-1 [Pteropus alecto]
Length = 760
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 336 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 380
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 243 PPHG---MAAGHPAFLP-PEMGGLPHG-LGMPGVDSVKHEALTISGDEGSMQPEEE-EIP 296
PP G G P P P P G +P + +S + +P EE E P
Sbjct: 248 PPAGPGTFKPGSPTVGPVPLPSAGPSGLSSLPPPPAAPASGPPLSATQIKQEPAEEYETP 307
Query: 297 SPPHHIPRGPSPEPKIEDSECHRSQSAIFLRHWNRGDYNSCCRTDLTFKPVPDSKLARKR 356
P R PSP PK+ D H SQSA F +H +RG +NSC R+DL F P+ SKLA+KR
Sbjct: 308 ESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRG-FNSCARSDLYFVPLEGSKLAKKR 366
Query: 357 E---ERLRKQAE 365
E++R++AE
Sbjct: 367 ADLVEKVRREAE 378
>gi|355670024|gb|AER94717.1| atrophin 1 [Mustela putorius furo]
Length = 536
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA+KR + L ++ RE E+R
Sbjct: 186 FNKHLDRG-FNSCARSDLYFVPLEGSKLAKKRAD-LVEKVRREAEQR 230
>gi|359323122|ref|XP_003640006.1| PREDICTED: LOW QUALITY PROTEIN: atrophin-1 [Canis lupus familiaris]
Length = 1173
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 375 FLRHWNRGDYNSCCRTDLTFKPVPDSKLARKREERLRKQAEREREER 421
F +H +RG +NSC R+DL F P+ SKLA KR + + K RE E+R
Sbjct: 749 FNKHLDRG-FNSCARSDLYFVPLEGSKLAXKRADLVEK-VRREAEQR 793
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.126 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,515,330,355
Number of Sequences: 23463169
Number of extensions: 418385638
Number of successful extensions: 14727716
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 42970
Number of HSP's successfully gapped in prelim test: 30215
Number of HSP's that attempted gapping in prelim test: 10299804
Number of HSP's gapped (non-prelim): 2158651
length of query: 514
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 367
effective length of database: 8,910,109,524
effective search space: 3270010195308
effective search space used: 3270010195308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)