RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1024
(514 letters)
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 40.5 bits (94), Expect = 3e-04
Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 401 KLARKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGGGGGGEEEEEEEGE 460
++ R + E + A+ E + K + M E + E+ E +
Sbjct: 207 EVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQ---------LTEKMENDRV 257
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKI 503
+ +E+E+ K +++++ K+ ++E K ++ + K+
Sbjct: 258 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 300
Score = 39.0 bits (90), Expect = 0.001
Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 2/125 (1%)
Query: 391 DLTFKPVPDSKLARKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGG--G 448
+ +L ++ + L+K+ E + +A+ + L D +
Sbjct: 141 AGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLT 200
Query: 449 GGGEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPK 508
+E E E + E + K + ++K ++ +++E +E K++ M+ R +
Sbjct: 201 EKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLL 260
Query: 509 EFLHR 513
+ R
Sbjct: 261 KEQER 265
Score = 33.9 bits (77), Expect = 0.035
Identities = 13/111 (11%), Positives = 42/111 (37%)
Query: 403 ARKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGGGGGGEEEEEEEGEEE 462
A + + K E + + ++ E + + E+
Sbjct: 174 AEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQM 233
Query: 463 EEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKEFLHR 513
E+KE+ ++ K+ +K + + + +E+++ + + +++ + KE +
Sbjct: 234 MEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Score = 30.5 bits (68), Expect = 0.50
Identities = 6/57 (10%), Positives = 27/57 (47%)
Query: 453 EEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKE 509
+ E++ +E ++ EK + + + K++E + +++ ++ + ++ +
Sbjct: 232 QMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRI 288
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein
TCTP (histamine-releasing factor) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 172
Score = 38.9 bits (91), Expect = 5e-04
Identities = 17/84 (20%), Positives = 24/84 (28%), Gaps = 20/84 (23%)
Query: 447 GGGGGEEEEEEEGEEEEEEKE--------------KKKEKKK------KKKKKKKKKEEE 486
GG E E EG E K+ KK K K K +++
Sbjct: 49 GGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRP 108
Query: 487 EEEEEEKKKMMMMMKKIRRRPKEF 510
E + +K I K +
Sbjct: 109 ERVKPFMTGAAEQIKHILANFKNY 132
>d1txja_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP
(histamine-releasing factor) {Plasmodium knowlesi
[TaxId: 5850]}
Length = 171
Score = 38.6 bits (90), Expect = 6e-04
Identities = 17/83 (20%), Positives = 27/83 (32%), Gaps = 20/83 (24%)
Query: 448 GGGGEEEEEEEGEEEEEE------------------KEKKKEKKKKKKKKKKKKEEEEEE 489
G EE +G + E KE K +K K EE++ +
Sbjct: 49 GIADNSEEAVDGMGADVEQVIDIVDSFQLTSTSLSKKEYSVYIKNYMQKILKYLEEKKPD 108
Query: 490 EEE--KKKMMMMMKKIRRRPKEF 510
+ K K ++K I +F
Sbjct: 109 RVDVFKTKAQPLIKHILTNFDDF 131
>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP
(histamine-releasing factor) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 168
Score = 36.6 bits (85), Expect = 0.003
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 20/83 (24%)
Query: 448 GGGGEEEEEEEGEEEEEEK---------------EKKKEKKKKKK--KKKKKKEEEEEEE 490
G E+ EE EE E +KK K K K + +E E
Sbjct: 46 GANPSAEDAEENAEEGTETVNNLVYSFRLSPTSFDKKSYMSYIKGYMKAIKARLQESNPE 105
Query: 491 EE---KKKMMMMMKKIRRRPKEF 510
+K + +KKI K++
Sbjct: 106 RVPVFEKNAIGFVKKILANFKDY 128
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 37.0 bits (86), Expect = 0.003
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 467 EKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
+ + E +K+ K++K K +EE E+ K+ +M + R
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKER 149
Score = 35.1 bits (81), Expect = 0.011
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 463 EEEKEKKKEKKKKKKKKKKKKEEEEEEE 490
+ + E +K+ K++K K K++ E+ +E
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 32.0 bits (73), Expect = 0.12
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEE 486
+ E K+ KE+K K K++ +K +E
Sbjct: 111 AQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 26.6 bits (59), Expect = 5.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKK 479
+ + E + +EEK K KE+ +K K+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 35.5 bits (82), Expect = 0.009
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 467 EKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
+ +KE+KK+ ++KK+ E E+ E+ + R +
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQ 141
Score = 35.1 bits (81), Expect = 0.010
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 463 EEEKEKKKEKKKKKKKKKKKKEEEEEEE 490
+ +KE+KK+ ++KK+ + + E+ EE+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 32.8 bits (75), Expect = 0.067
Identities = 7/27 (25%), Positives = 20/27 (74%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEE 486
++E++K+ ++KK+ + +++K EE+
Sbjct: 103 LQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 26.2 bits (58), Expect = 8.0
Identities = 4/28 (14%), Positives = 19/28 (67%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKK 479
+ ++E++ + +EK++ + +++K ++
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 33.6 bits (76), Expect = 0.038
Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 404 RKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGG--GGGGEEEEEEEGEE 461
+ E L+K +ER + + ++ + R GG + E
Sbjct: 144 DEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLE 203
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
++ E ++ K + K +E + E+ +++ + RRR
Sbjct: 204 DDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRR 248
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 32.2 bits (73), Expect = 0.051
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRR 505
E EE + +E E K +K++ +++ +K EE K + +K+
Sbjct: 51 LEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMES 104
Score = 31.8 bits (72), Expect = 0.071
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 394 FKPVPDSKLARKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGGGGGGEE 453
F + EE +K E E R+ +A + L+ E ++
Sbjct: 32 FNASLPRRRDPSLEEIQKKL-EAAEERRKYQEAELLKHLAEKREHEREVIQK------AI 84
Query: 454 EEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
EE + +EK +K + K+ ++ E +E+ K + K +
Sbjct: 85 EENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK 137
Score = 31.4 bits (71), Expect = 0.088
Identities = 11/63 (17%), Positives = 27/63 (42%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKEFL 511
EE + E E + +K + +++ +K +E + K+K+ M+ + + L
Sbjct: 54 AEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHL 113
Query: 512 HRI 514
+
Sbjct: 114 AAM 116
Score = 30.6 bits (69), Expect = 0.19
Identities = 13/91 (14%), Positives = 33/91 (36%)
Query: 404 RKREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGGGGGGEEEEEEEGEEEE 463
+K+ E ++ + + E K A ++ E+ ++ +E
Sbjct: 48 QKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKE 107
Query: 464 EEKEKKKEKKKKKKKKKKKKEEEEEEEEEKK 494
+ ++ ++K K EE + +E K+
Sbjct: 108 NREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 33.0 bits (75), Expect = 0.084
Identities = 6/32 (18%), Positives = 22/32 (68%)
Query: 465 EKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
+ K+ +K+++ ++K ++ + +E+ EK+++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKERL 332
Score = 31.1 bits (70), Expect = 0.31
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 464 EEKEKKKEKKKKKKKKKKKKEEEEEE 489
+E +K++E ++K ++ K KE+ E+E
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 30.7 bits (69), Expect = 0.44
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 454 EEEEEGEEEEEEKEKKKEKKKKKKKKK 480
+E ++ E EE+ + K K+K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 30.3 bits (68), Expect = 0.52
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 455 EEEEGEEEEEEKEKKKEKKKKKKKKKK 481
+E + E EEK ++ + K+K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.9 bits (67), Expect = 0.66
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEE 487
+E +K ++ E+K ++ K K+K E+E
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 29.9 bits (67), Expect = 0.72
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEE 486
+E +++ + +EK ++ K K+K E+E
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 29.6 bits (66), Expect = 0.81
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 453 EEEEEEGEEEEEEKEKKKEKKKKKKKK 479
+E ++ E EE+ + K K+K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.6 bits (66), Expect = 1.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 457 EEGEEEEEEKEKKKEKKKKKKKKKKKK 483
+E ++ E +EK + K K+K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.0 bits (62), Expect = 3.1
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 456 EEEGEEEEEEKEKKKEKKKKKKKKKKK 482
+E + E E++ ++ K K+K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 27.2 bits (60), Expect = 4.9
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKE 484
E ++ + ++K ++ K K+K +KE
Sbjct: 306 ENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 26.9 bits (59), Expect = 6.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKK 477
E ++ E EE+ + KEK +K++
Sbjct: 306 ENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.9 bits (59), Expect = 6.5
Identities = 6/26 (23%), Positives = 18/26 (69%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEE 485
+E ++ +E +++ ++ K K+K ++E
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 26.5 bits (58), Expect = 8.5
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKK 478
+E ++ EE+ + K ++K +K++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 30.9 bits (70), Expect = 0.14
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 451 GEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEE 488
EEE E G E ++ ++E ++KK K+ E+
Sbjct: 54 QEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPED 91
Score = 29.0 bits (65), Expect = 0.74
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEE 489
+EEE E E K +E+ ++KK KE E+
Sbjct: 54 QEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPED 91
Score = 25.9 bits (57), Expect = 7.0
Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 442 PRRRGGGGGGEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEE----EEEEEEKKKM 496
++ E E + +E+ + KK K+ + E++ + +K
Sbjct: 48 SNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKF 106
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 109
Score = 29.8 bits (67), Expect = 0.29
Identities = 5/33 (15%), Positives = 13/33 (39%), Gaps = 5/33 (15%)
Query: 472 KKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIR 504
+KK + E+ + + ++ +IR
Sbjct: 82 VLPYNTLRKKGEVEQPGDTQVV-----LLTEIR 109
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 30.7 bits (69), Expect = 0.33
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 405 KREERLRKQAEREREEREKAQASMCNLLSRNPERIDTPRRRGGGGGGEEEEEEEGEEEEE 464
+ K+ + E E E + RI + G E+ + E E
Sbjct: 35 SELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIIS----GQEQPKPEQIAKGQEIVES 90
Query: 465 EKEKKKEKKKKKKKKKKKKEEEEE 488
E + +++K + +EE+ +
Sbjct: 91 LNETELLVDEEEKAQNDSEEEQVK 114
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Length = 334
Score = 30.6 bits (68), Expect = 0.47
Identities = 7/72 (9%), Positives = 20/72 (27%), Gaps = 7/72 (9%)
Query: 450 GGEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEE-------EEEEEKKKMMMMMKK 502
G + EE + ++ + + EE+ + + + +
Sbjct: 52 GFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAE 111
Query: 503 IRRRPKEFLHRI 514
+R + I
Sbjct: 112 LRAQYVVTRDTI 123
>d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission
yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 108
Score = 28.9 bits (64), Expect = 0.49
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
E + EK K K K + + + +
Sbjct: 70 TSEAISQFLEKPKPKTASLIKAYKMAQSTPDLDSL 104
Score = 26.6 bits (58), Expect = 3.1
Identities = 4/31 (12%), Positives = 10/31 (32%)
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEEEEEEE 491
E + ++ K K K + + +
Sbjct: 70 TSEAISQFLEKPKPKTASLIKAYKMAQSTPD 100
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 30.6 bits (68), Expect = 0.50
Identities = 8/45 (17%), Positives = 21/45 (46%)
Query: 453 EEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMM 497
+E ++ ++++EKE + E K K + + E ++ +
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFL 752
Score = 27.9 bits (61), Expect = 3.7
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 9/52 (17%)
Query: 451 GEEEEEEEGEEEEEEKEKKKEKKKKKKK---------KKKKKEEEEEEEEEK 493
E ++ +++E+E E + K K + +E + + E +
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR 759
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 29.2 bits (65), Expect = 0.54
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 468 KKKEKKKKKKKKKKKKEEEEEEEEEKK 494
++K + +K+ + + E +EE +K
Sbjct: 111 RRKLRADRKRIDQDRAAERAAKEEAQK 137
Score = 26.9 bits (59), Expect = 3.4
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 466 KEKKKEKKKKKKKKKKKKEEEEEEEEEKKK 495
+E +++ + +K+ + + E +EE +K
Sbjct: 108 REIRRKLRADRKRIDQDRAAERAAKEEAQK 137
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 30.0 bits (67), Expect = 0.64
Identities = 11/122 (9%), Positives = 35/122 (28%), Gaps = 14/122 (11%)
Query: 399 DSKLARKREERLRKQAEREREEREKAQA--------------SMCNLLSRNPERIDTPRR 444
+ + R ER+R + +KA L ++
Sbjct: 132 EQRRQRHDLERIRIANDTTLSPEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADL 191
Query: 445 RGGGGGGEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIR 504
+ G ++ + + E + + ++ + + + + E ++ + + R
Sbjct: 192 QKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRIAAQGLAPQDR 251
Query: 505 RR 506
Sbjct: 252 DA 253
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 29.6 bits (66), Expect = 0.81
Identities = 7/44 (15%), Positives = 20/44 (45%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKK 495
+ E+ + E EE+ +K + ++ + EE + +++
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQET 256
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 28.4 bits (63), Expect = 0.82
Identities = 8/44 (18%), Positives = 26/44 (59%)
Query: 454 EEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMM 497
++E++ ++ +++KK + + + + EEE++ ++KM+
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKML 100
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 28.7 bits (64), Expect = 0.89
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMM 500
E +E ++ K K++K + E EEE + +
Sbjct: 77 SEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQEL 117
Score = 26.8 bits (59), Expect = 4.2
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
+E +E K K++K + + EEE ++ + K R++
Sbjct: 80 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQ 124
Score = 26.0 bits (57), Expect = 5.8
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMK 501
+E ++ K K++K + + EEE +++ + K
Sbjct: 80 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAK 120
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and
second domains {Escherichia coli [TaxId: 562]}
Length = 355
Score = 29.4 bits (66), Expect = 0.99
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 437 ERIDTP--RRRGGGGGGEEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKK 494
+ +D RRR +E E E ++ + E + K+ ++ + + E
Sbjct: 206 QAVDMTELRRRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAE-QSRAVLRESL 264
Query: 495 KMMMMMKKI 503
M M ++ +
Sbjct: 265 LMAMCIRDM 273
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 28.8 bits (64), Expect = 1.1
Identities = 4/50 (8%), Positives = 11/50 (22%), Gaps = 8/50 (16%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKK--------KEEEEEEEEEKKKMMMMMK 501
+ EE E+ + + + + + K
Sbjct: 60 KCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTTFKFK 109
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
{Cryptosporidium parvum [TaxId: 5807]}
Length = 223
Score = 28.7 bits (64), Expect = 1.3
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEEE 487
EE+ +++ + + + K+ EE
Sbjct: 44 EEKLRKEKSLNNEFIQVIEDIKRDFEES 71
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes
takasagoensis) [TaxId: 62960]}
Length = 433
Score = 28.8 bits (64), Expect = 1.6
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 67 ALSQAGLSHVASATLSQTTSSSVSTNHGPQSHS----HHHQHSHHHHHQTATASPPASAI 122
+ +A +++++ Q + + G S HH++++ PPA A
Sbjct: 313 IMLEAAELGLSASSYRQFAQTQIDYALGDGGRSFVCGFGSNPPTRPHHRSSSC-PPAPAT 371
Query: 123 SGSKSRGIGDPIPN 136
+ DP +
Sbjct: 372 CDWNTFNSPDPNYH 385
>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus
halodurans [TaxId: 86665]}
Length = 155
Score = 27.6 bits (61), Expect = 2.0
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 377 RHWNRGDYNSCCRTDL-TFKPVPDSKLARKREERLRKQAEREREEREKAQASM 428
+ KPVP + + E+RL + A +E R K +A++
Sbjct: 104 TLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENR-KKRAAL 155
>d2hx5a1 d.38.1.1 (A:1-144) Hypothetical protein PMT2055
{Prochlorococcus marinus [TaxId: 1219]}
Length = 144
Score = 27.5 bits (60), Expect = 2.1
Identities = 15/138 (10%), Positives = 30/138 (21%), Gaps = 2/138 (1%)
Query: 1 MMTHHHSSSSVTTRMREEDAQEIMHHSSHHSSSVHHHSEHSKQTISHSTSSSATSVQHKM 60
M + R + DA +MH E + + S + ++
Sbjct: 1 MNPENWLLLRRVVRFGDTDAAGVMHFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEV 60
Query: 61 KRGTSPALSQAGLSHVASATLSQTTSSSVSTNHGPQSHSHHHQHSHHHHHQTATASPPAS 120
+ + + + + H A A
Sbjct: 61 TPEVALPIIHCQADFRRPIHTGDALAMELRPERLNPNSFQVHFEFRCEEQIAAHALIRHL 120
Query: 121 AISGSKSRGIGDPIPNHI 138
AI+ +P I
Sbjct: 121 AINAQTRHRC--ALPEGI 136
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 26.8 bits (59), Expect = 2.3
Identities = 5/42 (11%), Positives = 18/42 (42%)
Query: 454 EEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKK 495
+ ++E ++ E+++++ K K ++ +E
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYIS 91
Score = 26.0 bits (57), Expect = 4.5
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKK 495
+ ++E + EE++ + K K ++ +E K
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNK 93
Score = 25.6 bits (56), Expect = 5.7
Identities = 5/45 (11%), Positives = 17/45 (37%)
Query: 453 EEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMM 497
+ + E ++ E+++ + K K ++ K+ +
Sbjct: 47 RISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYIS 91
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 28.1 bits (62), Expect = 2.5
Identities = 5/35 (14%), Positives = 13/35 (37%)
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKK 495
+ E K+ + +K K+ + + E +
Sbjct: 223 KFEWHTLSKEYETQKVPKENAENYLIKISENKNDA 257
Score = 27.7 bits (61), Expect = 3.2
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKK 494
E ++ + +K K+ + + E + + K
Sbjct: 224 FEWHTLSKEYETQKVPKENAENYLIKISENKNDAK 258
Score = 26.5 bits (58), Expect = 8.2
Identities = 5/35 (14%), Positives = 12/35 (34%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
+ E K+ + +K K+ E + +
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENK 254
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 28.0 bits (61), Expect = 2.6
Identities = 9/54 (16%), Positives = 16/54 (29%)
Query: 453 EEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRR 506
E E + K K K+ K +K K + E + + +
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHK 188
Score = 28.0 bits (61), Expect = 2.7
Identities = 8/54 (14%), Positives = 17/54 (31%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRR 505
E E + + K K+ K +K K + E + + + +
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHK 188
Score = 26.8 bits (58), Expect = 6.3
Identities = 12/57 (21%), Positives = 16/57 (28%)
Query: 455 EEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKEFL 511
E E K +K K+ K +K K E E + K L
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNL 191
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 27.7 bits (61), Expect = 3.0
Identities = 6/56 (10%), Positives = 27/56 (48%)
Query: 456 EEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKEFL 511
+ E + + +K + + KK +KK + + ++ +++ + + + + + ++
Sbjct: 124 QTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYV 179
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 27.7 bits (61), Expect = 3.2
Identities = 9/49 (18%), Positives = 15/49 (30%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPKEF 510
E KE+ K +K K + I R+ K++
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQW 235
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus
[TaxId: 63363]}
Length = 101
Score = 26.3 bits (58), Expect = 3.6
Identities = 5/23 (21%), Positives = 9/23 (39%)
Query: 463 EEEKEKKKEKKKKKKKKKKKKEE 485
+E + E K+ +K E
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.9 bits (57), Expect = 4.4
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 456 EEEGEEEEEEKEKKKEKKKKKKKKKKKKE 484
G +E E + K+ +K+E
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.9 bits (57), Expect = 4.5
Identities = 3/23 (13%), Positives = 9/23 (39%)
Query: 465 EKEKKKEKKKKKKKKKKKKEEEE 487
++ + + K+ E+ E
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.9 bits (57), Expect = 5.2
Identities = 3/23 (13%), Positives = 9/23 (39%)
Query: 467 EKKKEKKKKKKKKKKKKEEEEEE 489
++ + + K+ E+ E
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.6 bits (56), Expect = 5.9
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 466 KEKKKEKKKKKKKKKKKKEEEEE 488
KE E + K+ E+ E
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 25.5 bits (56), Expect = 3.7
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
+ + + + K K K KK + KKK + EE+ K ++
Sbjct: 19 ADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEV 63
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS),
second 'additional' domain {Escherichia coli [TaxId:
562]}
Length = 162
Score = 26.7 bits (58), Expect = 4.3
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 16 REEDAQEIMHHSSHH--SSSVHHHSEHSKQTISHSTS 50
++E+ EI+ HS H ++ H+K I
Sbjct: 1 KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVID 37
>d1t3wa_ a.236.1.1 (A:) DNA primase DnaG, C-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 134
Score = 26.4 bits (58), Expect = 4.4
Identities = 3/60 (5%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 452 EEEEEEEGEEEEEE------KEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRR 505
++ + E+ + ++++ ++ EE+ ++ + +++ +
Sbjct: 75 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 134
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 27.3 bits (60), Expect = 4.6
Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 460 EEEEEEKEK-KKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
EE ++ ++ ++ +K K + + + E KK
Sbjct: 252 EEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYS 289
Score = 26.6 bits (58), Expect = 7.9
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 461 EEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEK 493
+EE K+ K+ ++ +K K E + + E
Sbjct: 251 KEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEV 283
>d2iaza1 a.281.1.2 (A:1-111) Hypothetical protein SP1372
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 111
Score = 26.2 bits (58), Expect = 5.0
Identities = 6/54 (11%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 456 EEEGEEEEEEKEKKKE-KKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRRRPK 508
++ + E + + +++ +K + + + + KM K+I+
Sbjct: 28 KDAIAADAEASKIFTDYLAFQEEIQKLAQTGQMPDASFQAKMEGFGKQIQGNSL 81
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal
domain {Thermoanaerobacterium thermosaccharolyticum
[TaxId: 1517]}
Length = 397
Score = 27.4 bits (60), Expect = 5.1
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 7/37 (18%)
Query: 214 FDPHWLELQRSSLDALRAH-------ALAAALHSPLP 243
F+ L +S+ L+A A A+L P
Sbjct: 3 FNGKANSLYYNSMMILKASEDKTNKGAYIASLSIPWG 39
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 26.6 bits (58), Expect = 5.6
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 8/55 (14%)
Query: 465 EKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMM-----MKKIRRRPKEFLHRI 514
+K KK+ + K K+E E+ + + I PKE
Sbjct: 17 QKFKKENESKYNTTIITNKDELTFEKVKLINPEYILFPHWSWII---PKEIFENF 68
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 27.2 bits (59), Expect = 5.8
Identities = 5/35 (14%), Positives = 18/35 (51%)
Query: 462 EEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKM 496
+ +E + +++ + + KE+ + E+K++
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKEL 36
>d2c0ga1 a.71.1.1 (A:1146-1251) Windbeutel, C-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 106
Score = 25.9 bits (57), Expect = 5.9
Identities = 9/50 (18%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 468 KKKEKKKKKKKKKKKKEEEEEEEEEKKKM----MMMMKKIRRRPKEFLHR 513
+ ++ K +K + ++E+ + E+++ ++ M+KI +FL
Sbjct: 17 NIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRKIHEVGYDFLEE 66
>d1giqa1 d.166.1.1 (A:3-209) Enzymatic component (Ia) of iota-toxin
{Clostridium perfringens [TaxId: 1502]}
Length = 207
Score = 26.7 bits (59), Expect = 6.0
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 457 EEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEE 490
E E+ ++KE + +KK+ ++ +K + E+E
Sbjct: 2 ERPEDFLKDKENAIQWEKKEAERVEKNLDTLEKE 35
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato
(Solanum tuberosum) [TaxId: 4113]}
Length = 364
Score = 26.9 bits (58), Expect = 6.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 460 EEEEEEKEKKKEKKKKKKKKKKKKEEEEEEE 490
+E KK K++ +K ++EE EE
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEE 360
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 25.9 bits (57), Expect = 6.6
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKE 484
E+E ++ E EEE ++ E ++ + ++
Sbjct: 18 EDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
>d1t11a1 a.223.1.1 (A:248-376) Trigger factor, C-terminal domain
{Vibrio cholerae [TaxId: 666]}
Length = 129
Score = 25.7 bits (56), Expect = 8.2
Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 408 ERLRKQAEREREEREKAQA--SMCNLLSRNPERIDTPRRRGGGGGGEEEEEEEGEEEEEE 465
+RK ERE ++ KA+ L + E I P ++ +
Sbjct: 21 AEVRKNMERELKQAIKARIKEQAIEGLVKENE-IQVP----------SALIDQEINVLRQ 69
Query: 466 KEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKI 503
+ ++ + + +E EE+ + + + +++ ++
Sbjct: 70 QAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLGEV 107
>d1qzxa2 a.36.1.1 (A:295-432) Signal sequence binding protein Ffh
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 138
Score = 25.7 bits (56), Expect = 8.3
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 456 EEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMK 501
E+ EE +K +KK + + K K + + +KM + K
Sbjct: 8 EKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSK 53
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 25.6 bits (56), Expect = 8.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 469 KKEKKKKKKKKKKKKEEEEEEEEEKKK 495
K + K K +++ K E E E+ E K
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFK 28
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 148
Score = 25.9 bits (57), Expect = 9.1
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 457 EEGEEEEEEKEKKKEKKKKKKK 478
+E + E E++++ E+ K+K+
Sbjct: 2 QECQNLEVERQRRLERIKQKQS 23
>d1k5db_ b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 146
Score = 25.7 bits (56), Expect = 9.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEE 487
E+E + EE+EEE K + K + + E +E
Sbjct: 13 PEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKE 48
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS)
C-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 24.3 bits (53), Expect = 10.0
Identities = 9/54 (16%), Positives = 24/54 (44%)
Query: 452 EEEEEEEGEEEEEEKEKKKEKKKKKKKKKKKKEEEEEEEEEKKKMMMMMKKIRR 505
E +E +E ++ ++K ++K +E E E+ ++ +++ R
Sbjct: 4 EWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAER 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.310 0.126 0.369
Gapped
Lambda K H
0.267 0.0614 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,021,332
Number of extensions: 103076
Number of successful extensions: 1513
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1212
Number of HSP's successfully gapped: 213
Length of query: 514
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 425
Effective length of database: 1,185,626
Effective search space: 503891050
Effective search space used: 503891050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.2 bits)