BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10242
(77 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 110 bits (274), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTEDQ+++F+EAFSLFDKDG G IT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 65 DFPEFLNLMARKM 77
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYD 140
Query: 68 HFLELMMKK 76
F+++MM K
Sbjct: 141 EFVKVMMAK 149
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 108 bits (271), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT+DQ+++F+EAFSLFDKDG G IT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 65 DFPEFLNLMARKM 77
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
Query: 68 HFLELMMKK 76
F+++MM K
Sbjct: 141 EFVKVMMAK 149
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 108 bits (270), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 68 DFPEFLTMMARKM 80
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 144 EFVQMMTAK 152
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 108 bits (270), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 66 DFPEFLTMMARKM 78
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 82 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 142 EFVQMMTAK 150
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 108 bits (270), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKKV 77
F+++M K
Sbjct: 141 EFVQMMTAKA 150
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 70 DFPEFLTMMARKM 82
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 86 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 146 EFVQMMTAK 154
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 62 DFPEFLTMMARKM 74
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 138 EFVQMMTAK 146
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 140 EFVQMMTAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 141 EFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 140 EFVQMMTAK 148
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E+++MIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 141 EFVQMMTAK 149
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELM 73
F+++M
Sbjct: 140 EFVQMM 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE + +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 140 EFVQMMTAK 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 141 EFVQMMTAK 149
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 140 EFVTMMTAK 148
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 141 EFVTMMTSK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKKV 77
F+++M K+
Sbjct: 141 EFVQMMTAKL 150
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 141 EFVTMMTSK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 141 EFVTMMTTK 149
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 65 DFPEFLTMMARKM 77
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 141 EFVQMMTAK 149
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 140 EFVTMMTSK 148
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 63 DFPEFLTMMARKM 75
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 79 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 68 HFLELM 73
F+++M
Sbjct: 139 EFVQMM 144
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 78 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 68 HFLELMMKK 76
F+ +M K
Sbjct: 138 EFVTMMTSK 146
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT++Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 64 DFPEFLNLMARKM 76
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
+EAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++ F+++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 73 MMKK 76
MM K
Sbjct: 145 MMAK 148
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 62 DFPEFLTMMARKM 74
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 68 HFLELM 73
F+++M
Sbjct: 138 EFVQMM 143
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT++Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 64 DFPEFLNLMARKM 76
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+++MM K
Sbjct: 140 EFVQVMMAK 148
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 61 DFPEFLTMMARKM 73
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 77 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 68 HFLELM 73
F+++M
Sbjct: 137 EFVQMM 142
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKK 76
DFP FL +M +K
Sbjct: 64 DFPEFLTMMARK 75
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 DFPHFLELMMKK 76
DFP FL +M +K
Sbjct: 65 DFPEFLTMMARK 76
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT++Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 61 DFPEFLNLMARKM 73
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 77 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Query: 68 HFLELMMKK 76
F+++MM K
Sbjct: 137 EFVQVMMAK 145
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 140 EFVQMMTAK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAF+LFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 64 DFPEFLSLMARKM 76
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+D + EAF +FD+DG+G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 67 PHFLELMMKK 76
F+ +M+ K
Sbjct: 139 EEFVRMMVSK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAF+LFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 64 DFPEFLSLMARKM 76
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+D + EAF +FD+DG+G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 67 PHFLELMMKK 76
F+ +M+ K
Sbjct: 139 EEFVRMMVSK 148
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 365 DFPEFLTMMARKM 377
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 EFVQMMTAK 449
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 366 DFPEFLTMMARKM 378
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 382 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 442 EFVQMMTAK 450
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 365 DFPEFLTMMARKM 377
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 EFVQMMTAK 449
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 328 DFPEFLTMMARKM 340
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 344 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 68 HFLELM 73
F+++M
Sbjct: 404 EFVQMM 409
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT++Q+++F+EAFSLFDKDG G IT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
DFP FL LM +K+
Sbjct: 64 DFPEFLNLMARKM 76
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 365 DFPEFLTMMARKM 377
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 EFVQMMTAK 449
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 331 DFPEFLTMMARKM 343
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 407 EFVQMMTAK 415
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 331 DFPEFLTMMARKM 343
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 407 EFVQMMTAK 415
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G ID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 66 FPHFLELMMKKV 77
FP FL +M +K+
Sbjct: 63 FPEFLTMMARKM 74
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 138 EFVQMMTAK 146
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 365 DFPEFLTMMARKM 377
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 EFVQMMTAK 449
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G ID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPHFLELMMKKV 77
FP FL +M +K+
Sbjct: 61 FPEFLTMMARKM 72
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 136 EFVQMMTAK 144
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 364 DFPEFLTMMARKM 376
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 440 EFVQMMTAK 448
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G ID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPHFLELMMKKV 77
FP FL +M +K+
Sbjct: 61 FPEFLTMMARKM 72
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
+ REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE + +G G +++ F++
Sbjct: 79 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 138
Query: 72 LM 73
+M
Sbjct: 139 MM 140
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 364 DFPEFLTMMARKM 376
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 440 EFVQMMTAK 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 364 DFPEFLTMMARKM 376
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 440 EFVQMMTAK 448
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 105 bits (262), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 356 DFPEFLIMMARKM 368
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 432 EFVQMMTAK 440
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 105 bits (261), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 59/71 (83%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG VMRSLG+NP+EAEL++MI EVD +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 DFPHFLELMMK 75
DFP FL +M +
Sbjct: 365 DFPEFLTMMAR 375
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 EFVQMMTAK 449
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSL+DKDG GTIT K LG VMRSLG NP+EAEL++MI EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 65 DFPHFLELMMK 75
DFP FL +M +
Sbjct: 64 DFPEFLTMMAR 74
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 103 bits (256), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG G IT K LG VMRSLG+NP+EAEL++MI EV +G G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 365 DFPQFLTMMARKM 377
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +F KDG+G I+A L VM +LG ++ E++EMIRE +G G +++
Sbjct: 381 DSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYE 440
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 441 QFVQMMTAK 449
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+QV +F+EAFSLFDKDG G IT + LG VMRSLG+NP+EAEL +M+ E+D +G G +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 65 DFPHFLELMMKKV 77
DFP FL +M +K+
Sbjct: 64 DFPEFLGMMARKM 76
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G ++A L VM LG S+ E++EMIR D +G G +++
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F+ +++ K
Sbjct: 140 EFVRVLVSK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG V RSLG+NP+EAEL++ I EVD +G G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 65 DFPHFLELMMKK 76
DFP FL +K
Sbjct: 65 DFPEFLTXXARK 76
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L V +LG ++ E+++ IRE D +G G +++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Query: 68 HFLELMMKK 76
F++ K
Sbjct: 141 EFVQXXTAK 149
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG V RSLG+NP+EAEL++ I EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 65 DFPHFLELMMKK 76
DFP FL +K
Sbjct: 64 DFPEFLTXXARK 75
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L V +LG ++ E++E IRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F++ K
Sbjct: 140 EFVQXXTAK 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 95.5 bits (236), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q+ +F+EAFSLFDKDG GTIT K LG V RSLG NP+EAEL++ I EVD +G G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 65 DFPHFL 70
+FP FL
Sbjct: 64 NFPEFL 69
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L V +LG ++ E++E IRE D +G G +++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 68 HFLELMMKK 76
F++ K
Sbjct: 140 EFVQXXTAK 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 4 FLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
L+E+Q+ DF+EAF LFDKDG G IT + L V+RSL +NP+E EL++MI EVD +G G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 64 IDFPHFLELMMKKV 77
I+F FL LM KKV
Sbjct: 63 IEFDEFLSLMAKKV 76
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E+E+MI+E D +G G +++
Sbjct: 80 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Query: 68 HFLELMM 74
F+++MM
Sbjct: 140 EFVKMMM 146
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 4 FLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
L+E+Q+ DF+EAF LFDKDG G IT + L V+RSL +NP+E EL++MI EVD +G G
Sbjct: 3 ILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGT 62
Query: 64 IDFPHFLELMMKKV 77
I+F FL LM KKV
Sbjct: 63 IEFDEFLSLMAKKV 76
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L+E+Q+ DF+EAF LFDKDG G IT + L V+RSL +NP+E EL++MI EVD +G G I
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 65 DFPHFLELMMKKV 77
+F FL LM KKV
Sbjct: 64 EFDEFLSLMAKKV 76
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 85.9 bits (211), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 57/77 (74%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
M LTE+Q+ +F+EAF+LFDKD SG+I+A L VMRSLG +PSEAE+ +++ E+D +G
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 61 KGIIDFPHFLELMMKKV 77
I+F FL LM +++
Sbjct: 61 NHAIEFSEFLALMSRQL 77
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + EAF +FDK+G G I+A L V+ S+G ++AE++EM+REV +G G I+
Sbjct: 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIK 139
Query: 68 HFLELMMK 75
F L+ K
Sbjct: 140 QFAALLSK 147
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q + REAF LFD DGSGTI AK L + MR+LG P + E+++MI E+D +G G I
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 65 DFPHFLELMMKKV 77
DF FL +M K+
Sbjct: 82 DFEEFLTMMTAKM 94
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D SGTIT K L V + LG N +E EL+EMI E D ID F+ +M K
Sbjct: 106 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q + REAF LFD DGSGTI AK L + MR+LG P + E+++MI E+D +G G I
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 65 DFPHFLELMMKKV 77
DF FL +M K+
Sbjct: 84 DFEEFLTMMTAKM 96
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S LTE+Q+ +F+EAF+LFDKD +G+I++ L VMRSLG +PSEAE+ +++ E+D +G
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 63 IIDFPHFLELMMKKV 77
I+F FL LM +++
Sbjct: 62 QIEFSEFLALMSRQL 76
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+ D + EAF +FDK+G G I+A L V+ S+G ++AE+++M+REV +G G I+
Sbjct: 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 136
Query: 66 FPHFLELMMK 75
F L+ K
Sbjct: 137 IQQFAALLSK 146
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S LTE+Q+ +F+EAF+LFDKD +G+I++ L VMRSLG +PSEAE+ +++ E+D +G
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 63 IIDFPHFLELMMKKV 77
I+F FL LM +++
Sbjct: 62 QIEFSEFLALMSRQL 76
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELE 50
+ D + EAF +FDK+G G I+A L V+ S+G ++AELE
Sbjct: 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S LTE+Q+ +F+EAF+LFDKD +G+I++ L VMRSLG +PSEAE+ +++ E+D +G
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 63 IIDFPHFLELMMKKV 77
I+F FL LM +++
Sbjct: 62 QIEFSEFLALMSRQL 76
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S LTE+Q+ +F+EAF+LFDKD +G+I++ L VMRSLG +PSEAE+ +++ E+D +G
Sbjct: 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 62
Query: 63 IIDFPHFLELMMKKV 77
I+F FL LM +++
Sbjct: 63 QIEFSEFLALMSRQL 77
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+ D + EAF +FDK+G G I+A L V+ S+G ++AE+++M+REV +G G I+
Sbjct: 79 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 137
Query: 66 FPHFLELMMK 75
F L+ K
Sbjct: 138 IQQFAALLSK 147
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 15 EAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
+ F +FDK+ G I + LG ++R+ G + +E ++E+++++ D G IDF FL++M
Sbjct: 100 DCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F +FDK+ G I + LG ++R+ G + E ++E+++++ D G IDF FL++M
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 21 DKDGSGTITAKHLGIV----MRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
D+DGSGTI + ++ M+ + SE EL R D G ID E++
Sbjct: 66 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEIL 122
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 1 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 60
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 61 TIDFEEFLVMMVRQM 75
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F +FDK+ G I + LG ++R+ G + +E ++E+++++ D G IDF FL++M
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 71
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 72 TIDFEEFLVMMVRQM 86
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
+ + F +FDK+ G I + LG ++R+ G + +E ++E+++++ D G IDF FL+
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 72 LM 73
+M
Sbjct: 157 MM 158
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 21 DKDGSGTITAKHLGIV----MRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
D+DGSGTI + ++ M+ + SE ELE+ R D G ID E++
Sbjct: 66 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEIL 122
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 81.6 bits (200), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+FL+E+ + +F+ AF +FD DG G I+ K LG VMR LG+NP++ EL+ +I EVD +G G
Sbjct: 9 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSG 68
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 69 TIDFEEFLVMMVRQM 83
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F +FDK+ G I + LG ++R+ G + +E ++E+++++ D G IDF FL++M
Sbjct: 98 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q + REAF LFD DGSGTI AK L + MR+LG P + E+++MI ++D +G G I
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 65 DFPHFLELMMKKV 77
DF FL++M K+
Sbjct: 62 DFEEFLQMMTAKM 74
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D +G I+ K+L V + LG N ++ EL+EMI E D +G G ++ F +M K
Sbjct: 86 AFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 79.3 bits (194), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S+L+E+ + +F+ AF +FD DG G I+ K LG VMR LG+ P++ EL+ +I EVD +G G
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSG 68
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 69 TIDFEEFLVMMVRQM 83
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 15 EAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
E F +FD++ G I A+ L + R+ G + ++ E+E ++++ D G IDF FL++M
Sbjct: 97 ECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 21 DKDGSGTITAKHLGIV----MRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
D+DGSGTI + ++ M+ + SE EL E R D G ID E+
Sbjct: 63 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEI 118
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S+L+E+ + +F+ AF +FD DG G I+ K LG VMR LG+ P++ EL+ +I EVD +G G
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSG 68
Query: 63 IIDFPHFLELMMKKV 77
IDF FL +M++++
Sbjct: 69 TIDFEEFLVMMVRQM 83
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 15 EAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
E F +FD++ G I A+ L + R+ G + ++ E+E ++++ D G IDF FL++M
Sbjct: 97 ELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 21 DKDGSGTITAKHLGIV----MRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
D+DGSGTI + ++ M+ + SE EL E+ R D G ID E+
Sbjct: 63 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEI 118
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q + REAF LFD DG+GTI K L + MR+LG P + E+++MI E+D EG G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 65 DFPHFLELMMKKV 77
+F FL +M +K+
Sbjct: 85 NFGDFLTVMTQKM 97
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 54/75 (72%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
S LTE+Q+ +F++AF FDK+G+G I + LG +MR+LG+NP+EAEL+++I E + G
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNG 61
Query: 63 IIDFPHFLELMMKKV 77
++F F +M K++
Sbjct: 62 QLNFTEFCGIMAKQM 76
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FD+DG G I+ L VM +LG ++ E++EMIRE D +G G+I++
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 68 HFLELMMKK 76
F+ ++ +K
Sbjct: 140 EFVWMISQK 148
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 75.5 bits (184), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F +D G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF FL +M++
Sbjct: 72 VDFDEFLVMMVR 83
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE+Q + REAF LFD DG+GTI K L + MR+LG P + E+++MI E+D EG G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 66 FPHFLELMMKKV 77
F FL +M +K+
Sbjct: 61 FGDFLTVMTQKM 72
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D +G I+ K+L V + LG N ++ EL+EMI E D +G G + FL +M K
Sbjct: 84 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LT++Q N+F+ AF +F +D G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF FL +M++
Sbjct: 72 VDFDEFLVMMVR 83
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F + G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF FL +M++
Sbjct: 72 VDFDEFLVMMVR 83
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 93 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 150 YDEFLEFM 157
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F ++DK+ G I L I++++ G +E ++EE++++ D G ID
Sbjct: 93 SEEELSDL---FRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 150 YDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I L I++++ G +E ++EE++++ D G ID
Sbjct: 93 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ +LE M
Sbjct: 150 YDEWLEFM 157
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F + DK+ G I L I++++ G +E ++EE++++ D G ID
Sbjct: 93 SEEELSDL---FRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 150 YDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I L I++++ G +E ++EE++++ D G ID
Sbjct: 93 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ LE M
Sbjct: 150 YDEXLEFM 157
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 93 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 150 YDEFLEFM 157
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 5 LTEDQVNDFREAFSLF---DKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
LTE+Q N+F+ AF +F +DGS I+ K LG VMR LG+NP+ EL+EMI EVD +G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGS--ISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GIIDFPHFLELMMKKV 77
G +DF FL +M++ +
Sbjct: 70 GTVDFDEFLVMMVRSM 85
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF FL +M++
Sbjct: 72 VDFDEFLVMMVR 83
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF FL +M++
Sbjct: 72 VDFDEFLVMMVR 83
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 93 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 150 YDEFLEFM 157
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF +L +M++
Sbjct: 72 VDFDEWLVMMVR 83
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
+ ED++ + REAF +FD+DG+G I+ + LG MRSLG P+E ELE +I+ +D +G G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 65 DFPHFLELM 73
DF F+ L+
Sbjct: 90 DFEEFVTLL 98
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F G I+ K LG VMR LG+NP+ EL+EMI EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 64 IDFPHFLELMMK 75
+DF +L +M +
Sbjct: 72 VDFDEWLVMMAR 83
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LT ++ +++EAF LFDKD +TA+ LG VMR+LG NP++ ++ E++++ D + G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 65 DFPHFLELMM 74
D FL +M+
Sbjct: 68 DQETFLTIML 77
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 63 EFVQMMTAK 71
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 65 EFVQMMTAK 73
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 66 EFVQMMTAK 74
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
+ REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++ F++
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 72 LMMKK 76
+M K
Sbjct: 63 MMTAK 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 64 DFVQMMTAK 72
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 5 LTEDQVNDFREAFSLFDKDG-SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI 63
LTE+Q N+F+ AF +F G I+ K LG V R LG+NP+ EL+E I EVD +G G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGT 71
Query: 64 IDFPHFL 70
+DF FL
Sbjct: 72 VDFDEFL 78
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 68 HFLELM 73
F+++M
Sbjct: 62 EFVQMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF +FDKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 68 HFLELM 73
F+++M
Sbjct: 62 EFVQMM 67
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 68 HFLELMMKK 76
F+++MM K
Sbjct: 61 EFVKVMMAK 69
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + REAF + DKDG+G I+A L VM +LG ++ E++EMIRE D +G G +++
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 68 HFLELMMKK 76
F+++M K
Sbjct: 86 EFVQMMTAK 94
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L+E+Q + +EAF LFD + +G+I L + MR+LG + + E+ E++ E D EG G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 65 DFPHFLELMMKKV 77
F FL++M +K+
Sbjct: 61 GFDDFLDIMTEKI 73
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+DQV++F+EAF LFD + +G IT + L V++ G A EM E D G G I F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 67 PHFLELMMKKV 77
P FL +M +++
Sbjct: 62 PEFLSMMGRRM 72
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R+AF FD +G+G I L + +LG E E + + E KG I + +F+ M
Sbjct: 82 RQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETE-KGQIRYDNFINTM 140
Query: 74 M 74
Sbjct: 141 F 141
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+D + EAF +FD+DG+G I+A L VM +LG ++ E++EMIRE D +G G I++
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
Query: 67 PHFLELMMKK 76
F+ +M+ K
Sbjct: 64 EEFVRMMVSK 73
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
MD L +++ + REAF FDKD G I + LG MR++G P+E EL E+ ++++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 KGIIDFPHFLELMMKKV 77
G +DF F+ELM K+
Sbjct: 61 GGHVDFDDFVELMGPKL 77
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSL-GRNPSEAELEEMIREVDPEGKGIIDFPH 68
V + R+AF FD +G G I+ L MR+L G ++EE+IR+VD G G +DF
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLELMMK 75
F+ +M +
Sbjct: 147 FVRMMSR 153
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
MD L +++ + REAF FDKD G I + LG MR++G P+E EL E+ ++++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 KGIIDFPHFLELMMKKV 77
G +DF F+ELM K+
Sbjct: 61 GGHVDFDDFVELMGPKL 77
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSL-GRNPSEAELEEMIREVDPEGKGIIDFPH 68
V + R+AF FD +G G I+ L MR L G ++EE+IR+VD G G +DF
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLELMMK 75
F+ +M +
Sbjct: 147 FVRMMSR 153
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E+E+MI+E D +G G +++
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 68 HFLELMM 74
F+++MM
Sbjct: 61 EFVKMMM 67
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D + +EAF +FDKD +G I+A L VM +LG ++ E+E+MI+E D +G G +++
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 68 HFLELMM 74
F+++MM
Sbjct: 66 EFVKMMM 72
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 2 DSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
D L +++ + REAF FDKD G I + LG MR++G P+E EL E+ ++++
Sbjct: 1 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 60
Query: 62 GIIDFPHFLELMMKKV 77
G +DF F+ELM K+
Sbjct: 61 GHVDFDDFVELMGPKL 76
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 2 DSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
D L +++ + REAF FDKD G I + LG MR++G P+E EL E+ ++++
Sbjct: 16 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 75
Query: 62 GIIDFPHFLELMMKKV 77
G +DF F+ELM K+
Sbjct: 76 GHVDFDDFVELMGPKL 91
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSL-GRNPSEAELEEMIREVDPEGKGIIDFPH 68
V + R+AF FD +G G I+ L MR L G ++EE+IR+VD G G +DF
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 69 FLELMMK 75
F+ +M +
Sbjct: 161 FVRMMSR 167
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 4 FLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNP-SEAELEEMIREVDPEGKG 62
++ +D + AF +FD +G G I +M+ +G P ++AE+EE ++E D +G G
Sbjct: 1 WVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNG 60
Query: 63 IIDFPHFLELMMK 75
+ID P F++L+ K
Sbjct: 61 VIDIPEFMDLIKK 73
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D SGTIT K L V + LG N +E EL+EMI E D ID F+ +M K
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
LTE+Q + REAF LFD DG+GTI K L + R+LG P + E+++ I E+D EG G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 65 DFPHFLELMMKK 76
+F FL + +K
Sbjct: 85 NFGDFLTVXTQK 96
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D +G I+ K+L V + LG N ++ EL+E I E D +G G + FL + K
Sbjct: 109 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKK 168
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPE--GKGIID 65
D++NDF+EAF LFD+ G IT +G ++R+LG+NP+ AE+ +++ E I
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 66 FPHFLELM 73
F FL ++
Sbjct: 61 FEEFLPML 68
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
DF E +FDK+G+GT+ L V+ +LG +E E+EE+++ + + G I++ F++
Sbjct: 82 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 140
Query: 72 LMM 74
+M
Sbjct: 141 HIM 143
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
+ +EAF + DK+ G I L +++SLG +E E+E MI E D +G G +D+ F
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 72 LMM 74
LMM
Sbjct: 68 LMM 70
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D +G I+ K+L V + LG N ++ EL+EMI E D +G G + FL +M K
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 75
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIR--EVDPEGKG 62
+E+Q +F+EAF LFD+ G G I G VMR+LG+NP+ AE+ +++ + D
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 63 IIDFPHFLELM 73
+ F FL +M
Sbjct: 63 TLKFEQFLPMM 73
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
D+ E +FDK+G+GT+ + V+ +LG +E E+E+++ + G I++ +
Sbjct: 87 DYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYEELVR 145
Query: 72 LMM 74
+++
Sbjct: 146 MVL 148
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 148
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIR--EVDPEGKG 62
+E+Q +F+EAF LFD+ G G I G VMR+LG+NP+ AE+ +++ + D
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 63 IIDFPHFLELM 73
+ F FL +M
Sbjct: 61 TLKFEQFLPMM 71
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
D+ E +FDK+G+GT+ + V+ +LG +E E+E+++ + + G I++ +
Sbjct: 85 DYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELVR 143
Query: 72 LMM 74
+++
Sbjct: 144 MVL 146
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF LFD D +G I+ K+L V + LG N ++ EL+EMI E D +G G + FL +M K
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 85
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPE--GKGIIDFP 67
+DF+EAF LFD+ G ITA +G + R+LG+NP+ AE+ +++ E I F
Sbjct: 5 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFE 64
Query: 68 HFLELM 73
FL ++
Sbjct: 65 EFLPML 70
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
DF E +FDK+G+GT+ L V+ +LG +E E+EE+++ + + G I++ F++
Sbjct: 84 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 142
Query: 72 LMM 74
+M
Sbjct: 143 HIM 145
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPE--GKGIIDFP 67
+DF+EAF LFD+ G ITA +G + R+LG+NP+ AE+ +++ E I F
Sbjct: 7 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFE 66
Query: 68 HFLELM 73
FL ++
Sbjct: 67 EFLPML 72
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
DF E +FDK+G+GT+ L V+ +LG +E E+EE+++ + + G I++ F++
Sbjct: 86 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 144
Query: 72 LMM 74
+M
Sbjct: 145 HIM 147
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGI- 63
+DQ+ +F+EAF LFD+ G G I G VMR+LG+NP+ AE+ +++ +P+ +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLG--NPKSDELK 61
Query: 64 ---IDFPHFLELM 73
+DF FL ++
Sbjct: 62 SRRVDFETFLPML 74
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
D+ E F +FDK+G+G + L V+ +LG +E E+E ++ + G I++ FL+
Sbjct: 88 DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLK 146
Query: 72 LMM 74
++
Sbjct: 147 HIL 149
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 11 NDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFL 70
+ REAF L+DK+G+G I+ + ++ L S +L+ MI E+D +G G +DF F+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 71 ELM 73
+M
Sbjct: 63 GVM 65
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
++++Q+N+FR +F+ FD+ +G + + + S+G N EAE ++ VDP G++
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 65 DFPHFLELMMKK 76
F F++ M ++
Sbjct: 779 TFQAFIDFMSRE 790
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 11 NDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFL 70
+ REAF L+DK+G+G I+ + ++ L S +L+ MI E+D +G G +DF F+
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 71 ELM 73
+M
Sbjct: 151 GVM 153
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 3 SFLTEDQVNDFREAFSLFDK-DGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGK 61
S L+ +QV AF F+ +GSG ++ +GI++ LG +++ + ++I E DP G
Sbjct: 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGN 64
Query: 62 GIIDFPHF 69
G IDF F
Sbjct: 65 GDIDFDSF 72
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSL-GRNPSEAELEEMIREVDPEGKGIIDFPH 68
V + R+AF FD +G G I+ L MR L G ++EE+IR+VD G G +DF
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 69 FLELMMK 75
F+ +M +
Sbjct: 66 FVRMMSR 72
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 46/71 (64%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
T+ + DF +AF +FDK+ +G ++ L ++ LG ++AE++E+++ V+ + G ID
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEID 137
Query: 66 FPHFLELMMKK 76
+ F+E ++++
Sbjct: 138 YKKFIEDVLRQ 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMI 53
++ F+LFDK G G I LG +R++G NP+ ++++I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 44/68 (64%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPH 68
+ DF +AF +FDK+ +G ++ L ++ LG ++AE++E+++ V+ + G ID+
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 69 FLELMMKK 76
F+E ++++
Sbjct: 63 FIEDVLRQ 70
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 13 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 70 YDEFLEFM 77
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
++S L E+Q + EAFSLFD + G + L + M++LG + E+ ++I E D EG
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEG 72
Query: 61 KGIIDFPHFLELMMKKV 77
+ ++ + F +M +K+
Sbjct: 73 RHLMKYDDFYIVMGEKI 89
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
TE++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 8 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 65 YDEFLEFM 72
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKG 62
+ T+ QV +F+EAF L D+D G I+ + SLGR +E EL+ M+ E G
Sbjct: 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPG 104
Query: 63 IIDFPHFLELMMKKV 77
I+F FL + ++
Sbjct: 105 PINFTMFLTIFGDRI 119
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF+LFD +G G + L + + G S+ E+++ + E +G G+ID F +++ K
Sbjct: 131 AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D + AF FD+DG G IT L M LG+ + EL+ MIRE D + G +++ F
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 70 LELMMKK 76
++ ++
Sbjct: 65 ARMLAQE 71
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AFS FDKDGSG IT + + G + + +++MI+E+D + G ID+ F +M K
Sbjct: 87 AFSYFDKDGSGYITLDEIQQACKDFGLD--DIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
Query: 76 K 76
+
Sbjct: 145 R 145
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L+E+++ +E F + D D SGTIT L ++ +G E+E+++++ D + G I
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 65 DFPHFL 70
D+ F+
Sbjct: 64 DYGEFI 69
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
+++AFSLFD+ G+G I +G ++R+ G+NP+ AE+ E+ + E +D FL++
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQV 62
Query: 73 MMK 75
+ +
Sbjct: 63 LNR 65
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLE 71
+F + F +FDKD +G I L V+ SLG S E++E+++ V P G++++ F++
Sbjct: 77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV-PVKDGMVNYHDFVQ 135
Query: 72 LMM 74
+++
Sbjct: 136 MIL 138
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+Q + +AF DK+G+GTI L ++ +LG + +E+EE+++EV G G I++
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 68 HFLELMM 74
F+++++
Sbjct: 133 SFVDMLV 139
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAEL 49
+ +E F +FDKD G ++ + LG +RSLG+NP+ AEL
Sbjct: 4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAEL 43
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F +FDK+ G I + LG ++R+ G + E ++E+++++ D G IDF FL++M
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 3 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 60 YDEFLEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I + L I++++ G +E ++EE++++ D G ID
Sbjct: 5 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 62 YDEFLEFM 69
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L++ Q+ + +EAF++ D+D G I + L + SLGR P + EL M++E G +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQL 65
Query: 65 DFPHFLELMMKKV 77
+F FL L +KV
Sbjct: 66 NFTAFLTLFGEKV 78
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREV 56
R AFS+FD+DG G I +L ++ ++G N S+ E++ + ++
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
AF +FDKDGSG I+ K L + + ELE +I +VD G +DF F+E++
Sbjct: 422 AFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+E++++D F +FDK+ G I L I++++ G +E ++EE++++ D G ID
Sbjct: 4 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 66 FPHFLELM 73
+ FLE M
Sbjct: 61 YDEFLEFM 68
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+D F FD +G G I+ L +R+LG ++ E++ M+ E+D +G G IDF F
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
Query: 70 LEL 72
+
Sbjct: 61 ISF 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+D F FD +G G I+ L +R+LG ++ E++ M+ E+D +G G IDF F
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
Query: 70 LEL 72
+
Sbjct: 60 ISF 62
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L+E+++ +E F+ D D SG IT + L ++ +G N E+E+ ++ + D + G I
Sbjct: 21 LSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTI 80
Query: 65 DFPHFLELMM 74
D+ F+ +
Sbjct: 81 DYKEFIAATL 90
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELMMK 75
AF+ FDKDGSG IT L G + +EE+ R+VD + G ID+ F+ K
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEFVAXXQK 161
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 143
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+ Q+ +F+EAF++ D++ G I + L ++ S+G+NP++ LE M+ E G I+F
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINF 58
Query: 67 PHFLELMMKKV 77
FL + +K+
Sbjct: 59 TMFLTMFGEKL 69
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF+ FD++ SG I HL ++ ++G ++ E++EM RE + KG ++ F ++
Sbjct: 79 RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 138
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 47 AELEEMIREVDPEGKGIIDFPHFLELMMKKV 77
AEL++MI EVD +G G IDFP FL +M +K+
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKM 31
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLG 41
D + REAF +FDKDG+G I+A L VM +LG
Sbjct: 35 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + Q+ + +EAFS+ D D G ++ + + + LGR P + EL M++ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 57 NFTMFLSIFSDKL 69
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF++FD+ + + +++ ++ ++G N ++ E+ +E EG G D+ F ++
Sbjct: 79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + Q+ + +EAFS+ D D G ++ + + + LGR P + EL M++ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 57 NFTMFLSIFSDKL 69
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF++FD+ + + +++ ++ ++G N ++ E+ +E EG G D+ F ++
Sbjct: 79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility
And Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel
Nucleotide Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever
Arm) With Reconstituted Complete Light Chains
Length = 156
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + Q+ + +EAFS+ D D G ++ + + + LGR P + EL M++ E G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 67
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 68 NFTMFLSIFSDKL 80
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF++FD+ + + +++ ++ ++G N ++ E+ +E EG G D+ F ++
Sbjct: 90 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 148
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L+E+++ +E F + D D SGTIT L ++ +G E+E+++++ D + G I
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 65 DFPHFL 70
D+ F+
Sbjct: 77 DYGEFI 82
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
Length = 157
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + Q+ + +EAF++ D++ G I L + SLGR P + EL M++E G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 68
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 69 NFTMFLSIFSDKL 81
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 3 SFLTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNPSEAELEE 51
S LT+D++ + RE F LFD DG G + A +G ++R LG NP+EA++ +
Sbjct: 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQ 51
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
M S T ++F EAF FD++G G I++ + V++ LG +E + ++ D
Sbjct: 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDI-- 132
Query: 61 KGIIDFPHFLELMMKKV 77
+ ID E +MKKV
Sbjct: 133 REDIDGNIKYEDLMKKV 149
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGKGIIDFPHFLELMM 74
AF FD DGSG IT + LG R G + E ++++E D G +DF F+E+M
Sbjct: 128 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 75 K 75
K
Sbjct: 185 K 185
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
++S L E+Q + EAFSLFD + G + L + ++LG + E+ ++I E D EG
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEG 72
Query: 61 KGIIDFPHFLELMMKKV 77
+ + + F + +K+
Sbjct: 73 RHLXKYDDFYIVXGEKI 89
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGR--NPSE---AELEEMIREVDPEGKGIIDFPHFL 70
AF +FD D G IT L V+ + + N +E ++++MIREVD G G IDF F
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 71 ELM 73
E+M
Sbjct: 190 EMM 192
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHL--GIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
V + AF D++G G IT L G+ L P+ + ++ ++D +G G ID+
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN---FDLLLDQIDSDGSGNIDYT 110
Query: 68 HFL 70
FL
Sbjct: 111 EFL 113
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDF 66
+ Q+ + +EAFS+ D D G ++ + + + LGR P + EL M++ E G ++F
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNF 57
Query: 67 PHFLELMMKKV 77
FL + K+
Sbjct: 58 TMFLSIFSDKL 68
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF++FD+ + + +++ ++ ++G N ++ E+ +E EG G D+ F ++
Sbjct: 78 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 136
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPH 68
Q+ + +EAFS+ D D G ++ + + + LGR P + EL M++ E G ++F
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTM 57
Query: 69 FLELMMKKV 77
FL + K+
Sbjct: 58 FLSIFSDKL 66
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
R AF++FD+ + + +++ ++ ++G N ++ E+ +E EG G D+ F ++
Sbjct: 76 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFTAMI 134
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGKGIIDFPHFLELMM 74
AF FD DGSG IT + LG R G + E ++++E D G +DF F+E+M
Sbjct: 402 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
Query: 75 K 75
K
Sbjct: 459 K 459
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
T + D F FD +G G I++ LG +++LG + + E+ M+ E+D +G G I
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFIS 64
Query: 66 FPHFLEL 72
F F +
Sbjct: 65 FDEFTDF 71
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
F FD +G G I+A LG +++LG + + E++ M+ E+D +G G I F F +
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT R G +PSE + E+ + D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELD 167
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGR-NPSEAELEEMIREVDPEGK 61
S + Q+ DF+EAF++ D++ G I L ++GR N EL+ MI+ E
Sbjct: 4 SMFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EAS 59
Query: 62 GIIDFPHFLELMMKKV 77
G I+F FL + +K+
Sbjct: 60 GPINFTVFLTMFGEKL 75
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGR-NPSEAELEEMIREVDPEGK 61
S E ++ DF+EAF++ D++ G I L ++GR N EL+ MI+E
Sbjct: 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----S 72
Query: 62 GIIDFPHFLELMMKKV 77
G I+F FL + +K+
Sbjct: 73 GPINFTVFLTMFGEKL 88
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
AF + D DG G+I L ++ + G + E++ M P+ G +D+ + ++
Sbjct: 100 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 157
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 70 LE 71
++
Sbjct: 151 IQ 152
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 70 LE 71
++
Sbjct: 129 IQ 130
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 70 LE 71
++
Sbjct: 130 IQ 131
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 70 LE 71
++
Sbjct: 152 IQ 153
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + ++N+ R F D D SGT++++ + ++ +G ++ +++R++D G I
Sbjct: 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQI 110
Query: 65 DFPHFLELMMKK 76
+ FL + K
Sbjct: 111 HYTDFLAATIDK 122
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAEL-----EEMIREVDPEGKGIIDFPHFLE 71
F FD DG+G I+ + L R GR+ E L + +++EVD G G IDF F+
Sbjct: 135 FKFFDIDGNGKISVEELK---RIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Query: 72 LMMKK 76
+M KK
Sbjct: 192 MMSKK 196
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LE 71
++
Sbjct: 133 IQ 134
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 7 EDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGR-NPSEAELEEMIREVDPEGKGIID 65
E ++ DF+EAF++ D++ G I L ++GR N EL+ MI+E G I+
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPIN 58
Query: 66 FPHFLELMMKKV 77
F FL + +K+
Sbjct: 59 FTVFLTMFGEKL 70
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
AF + D DG G+I L ++ + G + E++ M P+ G +D+ + ++
Sbjct: 82 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 139
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT + G +PS+ + E R D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT + G +PS+ + E R D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT + G +PS+ + E R D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT + G +PS+ + E R D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLD 167
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
F +FDKDGSGTIT + G +PS+ + E R D + G +D
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLD 167
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LE 71
++
Sbjct: 133 IQ 134
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSL---GRNPSEAELEEMIREVDPEGKGIID 65
ND ++ F D D SG I + L V++S GR+ ++AE + ++ D +G G I
Sbjct: 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIG 99
Query: 66 FPHFLELM 73
F L+
Sbjct: 100 IDEFETLV 107
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMI 53
++ F+LFDK G G I LG +R++G NP+ ++++I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + + + +EAF++ D++ G I L + SLGR P + EL M++ E G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPL 72
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 73 NFTMFLSIFSDKL 85
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
Length = 161
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L + + + +EAF++ D++ G I L + SLGR P + EL M++ E G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPL 72
Query: 65 DFPHFLELMMKKV 77
+F FL + K+
Sbjct: 73 NFTMFLSIFSDKL 85
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 12 DFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRN--PSEAELEEMIREVDPEGKGIIDFP 67
+ + AF +F K+G I+ + L +VM++LG + + L+EMI EVD G G + F
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 68 HFLELMMKKV 77
FL +MMKK+
Sbjct: 66 EFL-VMMKKI 74
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-----LEEMIREVDPEGKGIIDFPHFL 70
AF +FD D G IT L ++ + + + + ++ MIR+VD G IDF F
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 71 ELM 73
E+M
Sbjct: 187 EMM 189
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 9 QVNDF-----REAFSLFDKDGSGTITAKHLGIVMRSLG-RNPSEAELEEMIREVDPEGKG 62
Q ND+ + F + D+DG G IT + L + G + P +L ++ ++D +G G
Sbjct: 45 QSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSG 102
Query: 63 IIDFPHFL 70
ID+ F+
Sbjct: 103 KIDYTEFI 110
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG--KGIIDFPHF 69
D+ EAF FD++G G I+ L V+ LG S+ E++E+I D + +G + + F
Sbjct: 86 DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 145
Query: 70 LELMM 74
++ +M
Sbjct: 146 VKKVM 150
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D +E F LFD DG G + A +G V R LG NP
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINP 45
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG--KGIIDFPHF 69
D+ EAF FD++G G I+ L V+ LG S+ E++E+I D + +G + + F
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
Query: 70 LELMM 74
++ +M
Sbjct: 145 VKKVM 149
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D +E F LFD DG G + A +G V R LG NP
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINP 44
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG--KGIIDFPHF 69
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D + +G + + F
Sbjct: 82 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 141
Query: 70 LELMM 74
++ +M
Sbjct: 142 VKKVM 146
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 6 TEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 41
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG--KGIIDFPHF 69
D+ EAF FD++G G I+ L V+ LG S+ E++E+I D + +G + + F
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
Query: 70 LELMM 74
++ +M
Sbjct: 145 VKKVM 149
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 44
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVD 57
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D
Sbjct: 83 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 128
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 42
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVD 57
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVD 57
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 44
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGK 61
S L++D++ AF FD+DG+G I+ L V G + E++ +EMI +D
Sbjct: 138 SLLSKDKL---ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNND 191
Query: 62 GIIDFPHFLELMMK 75
G +DF F +++ K
Sbjct: 192 GDVDFEEFCKMIQK 205
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVD 57
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 LTEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
L++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 44
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVD 57
D+ EAF FD++G G I+ L V+ +LG S+ +++E+I+ D
Sbjct: 82 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 127
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 6 TEDQVNDFREAFSLFD-KDG-SGTITAKHLGIVMRSLGRNP 44
++D+++D ++ F LFD DG G + A LG V R LG NP
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP 41
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ + +EAF++ D++ G I L SLGR P + EL M++ E G ++F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK----EAPGPLNFTMF 56
Query: 70 LELMMKKV 77
L + K+
Sbjct: 57 LSIFSDKL 64
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGK 61
S L++D++ AF FD+DG+G I+ L V G + E++ +EMI +D
Sbjct: 421 SLLSKDKL---ESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNND 474
Query: 62 GIIDFPHFLELMMK 75
G +DF F +++ K
Sbjct: 475 GDVDFEEFCKMIQK 488
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
R AF+LFD D SG IT + L + + SE +++ E D +IDF F+ +
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 73 MMK 75
M K
Sbjct: 495 MHK 497
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHL---GIVMRSLGRNPS-----EAELEEMIREVD 57
T ++ + + F DK+G G + K L V+R+ E E++ +++EVD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 58 PEGKGIIDFPHFLELMMKK 76
+ G I++ F+ + M K
Sbjct: 410 FDKNGYIEYSEFISVCMDK 428
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPH 68
++ F+E + FD +G+G I L ++ LG + EL+++I EV +P
Sbjct: 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Query: 69 FLELMMKK 76
FL +M+ K
Sbjct: 90 FLRMMLGK 97
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGKGIIDFPHFLELMM 74
AF +FD D SG I++ L + G + ++E + ++ EVD G +DF F ++++
Sbjct: 423 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Query: 75 K 75
K
Sbjct: 480 K 480
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPH 68
++ F+E + FD +G+G I L ++ LG + EL+++I EV +P
Sbjct: 49 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
Query: 69 FLELMMKK 76
FL +M+ K
Sbjct: 109 FLRMMLGK 116
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGKGIIDFPHFLELMM 74
AF +FD D SG I++ L + G + ++E + ++ EVD G +DF F ++++
Sbjct: 446 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Query: 75 K 75
K
Sbjct: 503 K 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAE-LEEMIREVDPEGKGIIDFPHFLELMM 74
AF +FD D SG I++ L + G + ++E + ++ EVD G +DF F ++++
Sbjct: 447 AFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Query: 75 K 75
K
Sbjct: 504 K 504
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+ D++ F +D+D SG I L + G S+ + +IR+ D +G+G I F F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 70 LE 71
++
Sbjct: 128 IQ 129
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSL---GRNPSEAELEEMIREVDPEGK 61
LT +D ++AF++ D+D SG I L + +++ R ++ E + ++ D +G
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 95
Query: 62 GIIDFPHFLELM 73
G I F L+
Sbjct: 96 GKIGVDEFTALV 107
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F D+DGS ++ A + LG +AE E + R+ D G G +D FL +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 10 VNDFREA-FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+ ++ EA F +FDKDGSG+I+ G PS+ + E+ + D + G +D
Sbjct: 114 IRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLD 170
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.067, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAEL-EEMIREVDPEGKGIIDFPHFLE 71
AF FD D SG I++ L + G + ++E + ++ EVD G +DF F +
Sbjct: 420 LERAFRXFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 72 LMMK 75
++K
Sbjct: 477 XLLK 480
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 9 QVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPH 68
++ F+ + FD +G+G I L ++ LG + EL+ +IREV + +
Sbjct: 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Query: 69 FLELMMKK 76
FL +M+ K
Sbjct: 106 FLRMMLGK 113
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGI---VMRSLGRNPSEAELEEMIREVDPEGK 61
L+ +D ++AF D+D SG I L + V ++ R ++AE + ++ D +G
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GIIDFPHFLELM 73
G I ++ L+
Sbjct: 96 GAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGI---VMRSLGRNPSEAELEEMIREVDPEGK 61
L+ +D ++AF D+D SG I L + V ++ R ++AE + ++ D +G
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 62 GIIDFPHFLELM 73
G I ++ L+
Sbjct: 95 GAIGVEEWVALV 106
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 15 EAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
E F D DGSG I+ L + S G S A E+++ D G I F F +L
Sbjct: 31 EWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDL 88
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLEL 72
RE F D G G + + + + S G SE + ++R+ D + +G + F ++EL
Sbjct: 96 REGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 32.0 bits (71), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSL---GRNPSEAELEEMIREVDPEGK 61
L ++D ++AF + D+D SG I L + +++ R ++AE + + + D +G
Sbjct: 35 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 94
Query: 62 GIIDFPHFLELM 73
G+I F ++
Sbjct: 95 GMIGVDEFAAMI 106
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGI---VMRSLGRNPSEAELEEMIREVDPEGK 61
LT +D ++AF + D+D SG I L + V + R ++AE + ++ D +G
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GIIDFPHFLELM 73
G I + L+
Sbjct: 96 GAIGVDEWAALV 107
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSL---GRNPSEAELEEMIREVDPEGK 61
LT +D ++AF++ D+D SG I L + +++ R ++ E + ++ D +G
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 62 GIIDFPHFLELM 73
G I + L+
Sbjct: 95 GKIGVDEWTALV 106
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 11 NDFREAFSLFDKDGSGTITAKHLGIVMRSL-GRNPSEAELEEM----IREVDPEGKGIID 65
N AF L+D D G I+ + V+R + G +E +LE + ++E D +G G +
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVS 173
Query: 66 FPHFLELMMK 75
F F + + K
Sbjct: 174 FVEFTKSLEK 183
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+N +R+ F FD D SGT+ + L + ++G S + + + GK I F +
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
Query: 70 LELMMK 75
+ +K
Sbjct: 160 IACCVK 165
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+ + ++ + FD D SGTI + L + G + +E +IR E G +DF
Sbjct: 85 NNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDES-GNMDFD 143
Query: 68 HFLELMMK 75
+F+ +++
Sbjct: 144 NFISCLVR 151
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+N +R+ F FD D SGT+ + L + ++G + + + + GK I F +
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDY 128
Query: 70 LELMMK 75
+ +K
Sbjct: 129 IACCVK 134
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+N ++E F D+DGSGT+ L + +G S L +++ G+ D
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFD 124
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID 65
+N ++E F D+DGSGT+ L + +G S L +++ G+ D
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFD 124
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F FD +G GTI + I + R E +L+ D +G G I LE++
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
M S D++ + F D D SG+++ + + + L +NP ++ +I D +G
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDG 66
Query: 61 KGIIDFPHFLE 71
G +DF F+E
Sbjct: 67 NGEVDFKEFIE 77
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 1 MDSFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEG 60
M S D++ + F D D SG+++ + + + L +NP ++ +I D +G
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDG 65
Query: 61 KGIIDFPHFLE 71
G +DF F+E
Sbjct: 66 NGEVDFKEFIE 76
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 10 VNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
+N +R+ F D D SGT+ + L + ++G S + + + GK I F +
Sbjct: 102 LNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
Query: 70 LELMMK 75
+ +K
Sbjct: 160 IACCVK 165
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMR---SLGRNPSEAELEEMIREVDPE 59
S L++ N ++ F D D SG + + L ++ S R +E+E + ++ D +
Sbjct: 34 SGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADND 93
Query: 60 GKGIIDFPHFLELM 73
G G I F E++
Sbjct: 94 GDGKIGAEEFQEMV 107
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRS----LGRN---------PSEAELEEMIREVDPE 59
+ AF+L+D + G IT + + +M+S +GR+ P+E +E ++D
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAE-HVERFFEKMDRN 69
Query: 60 GKGIIDFPHFLELMMK 75
G++ FLE K
Sbjct: 70 QDGVVTIEEFLEACQK 85
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 13 FREAFSLFDKDGSGTITAKHLGIVMRS----LGRNP-----SEAELEEMIR---EVDPEG 60
+ AF+L+D + G IT + + +M+S +GR+ +A LE + R ++D
Sbjct: 167 LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQ 226
Query: 61 KGIIDFPHFLELMMK 75
G++ FLE K
Sbjct: 227 DGVVTIDEFLETCQK 241
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 18 SLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFL 70
+ DK+ G I A + +LG S+AE E +VD G G + L
Sbjct: 109 GMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELL 159
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D++ + F D D SG+++ + + + L +NP ++ +I D +G G +DF
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 59
Query: 68 HFLE 71
F+E
Sbjct: 60 EFIE 63
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
D++ + F D D SG+++ + + + L +NP ++ +I D +G G +DF
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 68 HFLE 71
F+E
Sbjct: 59 EFIE 62
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+ + ++ + FD D SGTI + L + G + ++ +IR E G +DF
Sbjct: 74 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE-TGNMDFD 132
Query: 68 HFLELMMK 75
+F+ +++
Sbjct: 133 NFISCLVR 140
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+ + ++ + FD D SGTI + L + G + ++ +IR E G +DF
Sbjct: 85 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE-TGNMDFD 143
Query: 68 HFLELMMK 75
+F+ +++
Sbjct: 144 NFISCLVR 151
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 12 DFREAFSLFDKDGSGTITAKHLGIVMRSL 40
+F +AF L+D+DG+G I L +++ L
Sbjct: 192 EFNKAFELYDQDGNGYIDENELDALLKDL 220
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 3 SFLTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELE---EMIREVDPE 59
S +T Q F E + FD DGSG + K L +++ L + +A LE EM VD
Sbjct: 11 SLITASQ---FFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQY 67
Query: 60 GK------GIIDFPHFL 70
G+ GI++ H L
Sbjct: 68 GQRDDGKIGIVELAHVL 84
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFLELM 73
F++FDKD +G I + V+ + R E +L D G I F L ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
>pdb|4F52|A Chain A, Structure Of A Glomulin-Rbx1-Cul1 Complex
pdb|4F52|C Chain C, Structure Of A Glomulin-Rbx1-Cul1 Complex
Length = 282
Score = 27.3 bits (59), Expect = 2.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 30 AKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID---FPHFLELMMKK 76
A++ +++ +NP EAELE+ + +V + K I D F F M+ K
Sbjct: 15 ARYCDSLLKKSSKNPEEAELEDTLNQVMEKFKKIEDKDVFQKFYAKMLAK 64
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+ + ++ + FD D SGTI + L + G + ++ +IR E G +DF
Sbjct: 81 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE-TGNMDFD 139
Query: 68 HFLELMMK 75
+F+ +++
Sbjct: 140 NFISCLVR 147
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 DQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFP 67
+ + ++ + FD D SGTI + L + G + ++ +IR E G +DF
Sbjct: 85 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE-TGNMDFD 143
Query: 68 HFLELMMK 75
+F+ +++
Sbjct: 144 NFISCLVR 151
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 6 TEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSL---GRNPSEAELEEMIREVDPEGKG 62
T+ QV +E F + DKD SG I + L V++ GR+ ++ E + ++ D + G
Sbjct: 39 TDAQV---KEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 63 IIDFPHFLELMMK 75
I F +++ +
Sbjct: 96 KIGADEFAKMVAQ 108
>pdb|3RTR|A Chain A, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|C Chain C, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|E Chain E, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|G Chain G, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
Length = 368
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 30 AKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID---FPHFLELMMKK 76
A++ +++ +NP EAELE+ + +V + K I D F F M+ K
Sbjct: 15 ARYCDSLLKKSSKNPEEAELEDTLNQVMEKFKKIEDKDVFQKFYAKMLAK 64
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 45 SEAELEEMIREVDPEGKGIIDFPHFLELM 73
+E ++E+++++ D G IDF FL++M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L++D++ + + L D DG G +T + + + G + E + + D G G I
Sbjct: 70 LSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYI 124
Query: 65 DFPHFLELMM 74
FLE +
Sbjct: 125 TLEEFLEFSL 134
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 5 LTEDQVNDFREAFSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGII 64
L++D++ + + L D DG G +T + + + G + E + + D G G I
Sbjct: 70 LSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYI 124
Query: 65 DFPHFLELMM 74
FLE +
Sbjct: 125 TLEEFLEFSL 134
>pdb|4HLU|D Chain D, Structure Of The Ecfa-a' Heterodimer Bound To Adp
pdb|4HLU|C Chain C, Structure Of The Ecfa-a' Heterodimer Bound To Adp
Length = 268
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 44 PSEAELEEMIREVDPEGKGIIDFPHFLELM 73
PS+ E+ +++ + EGKGII H LE +
Sbjct: 174 PSQREIFQVLESLKNEGKGIILVTHELEYL 203
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 16 AFSLFDKDGSGTIT 29
AFSL+D DG+GTI+
Sbjct: 112 AFSLYDVDGNGTIS 125
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 14 REAFSLFDKDGSGTITAKHLGIVMR---SLGRNPSEAELEEMIREVDPEGKGIIDFPHFL 70
++ F D D SG + L ++ S R +E+E + ++ D +G G I F
Sbjct: 44 KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ 103
Query: 71 ELM 73
E++
Sbjct: 104 EMV 106
>pdb|1LDJ|A Chain A, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 760
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 25 SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID---FPHFLELMMKK 76
S + A++ +++ +NP EAELE+ + +V K I D F F M+ K
Sbjct: 402 SPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK 456
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHFL 70
+ L D DG G +T + + + G ++ + I + D G G I FL
Sbjct: 81 YKLMDADGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYITLEEFL 130
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 17 FSLFDKDGSGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIIDFPHF 69
F D +G G+++ + + + S +E L+ + + +D +G G ID F
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF 58
>pdb|1U6G|A Chain A, Crystal Structure Of The Cand1-Cul1-Roc1 Complex
Length = 776
Score = 25.8 bits (55), Expect = 7.4, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 25 SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID---FPHFLELMMKK 76
S + A++ +++ +NP EAELE+ + +V K I D F F M+ K
Sbjct: 418 SPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK 472
>pdb|1LDK|B Chain B, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 366
Score = 25.0 bits (53), Expect = 9.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 25 SGTITAKHLGIVMRSLGRNPSEAELEEMIREVDPEGKGIID---FPHFLELMMKK 76
S + A++ +++ +NP EAELE+ + +V K I D F F M+ K
Sbjct: 8 SPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAK 62
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,405,560
Number of Sequences: 62578
Number of extensions: 83779
Number of successful extensions: 711
Number of sequences better than 100.0: 278
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 434
length of query: 77
length of database: 14,973,337
effective HSP length: 46
effective length of query: 31
effective length of database: 12,094,749
effective search space: 374937219
effective search space used: 374937219
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)