Query psy10243
Match_columns 201
No_of_seqs 220 out of 1927
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 21:32:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10243.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10243hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5126 FRQ1 Ca2+-binding prot 99.9 8.2E-23 1.8E-27 152.6 12.6 135 48-200 21-156 (160)
2 KOG0027|consensus 99.9 6.8E-22 1.5E-26 148.5 12.7 138 48-200 9-149 (151)
3 KOG0028|consensus 99.8 1.4E-18 3E-23 127.8 12.7 137 47-200 33-170 (172)
4 KOG0031|consensus 99.8 2E-18 4.4E-23 126.1 12.4 133 48-201 33-166 (171)
5 KOG0030|consensus 99.8 1E-17 2.2E-22 120.4 10.2 142 46-201 10-152 (152)
6 PTZ00183 centrin; Provisional 99.7 1.5E-16 3.2E-21 119.5 14.1 134 50-200 20-154 (158)
7 PTZ00184 calmodulin; Provision 99.7 2.3E-16 4.9E-21 117.0 14.1 134 50-200 14-148 (149)
8 KOG0037|consensus 99.7 2.8E-15 6E-20 115.9 13.0 124 52-199 62-187 (221)
9 KOG0036|consensus 99.5 1.4E-13 3E-18 115.1 10.6 136 41-199 8-145 (463)
10 KOG0034|consensus 99.5 1.5E-12 3.3E-17 100.4 13.3 120 60-200 47-175 (187)
11 cd05022 S-100A13 S-100A13: S-1 99.4 3.3E-13 7.2E-18 92.2 7.1 65 135-199 7-74 (89)
12 PF13499 EF-hand_7: EF-hand do 99.4 5.9E-13 1.3E-17 85.8 7.5 62 137-198 1-66 (66)
13 cd05027 S-100B S-100B: S-100B 99.4 4.5E-12 9.7E-17 86.5 8.3 65 135-199 7-78 (88)
14 KOG0044|consensus 99.4 2.2E-11 4.8E-16 94.1 12.8 123 60-200 41-175 (193)
15 cd05031 S-100A10_like S-100A10 99.2 3.5E-11 7.5E-16 83.2 7.8 66 135-200 7-79 (94)
16 cd05025 S-100A1 S-100A1: S-100 99.2 4.4E-11 9.6E-16 82.3 8.0 65 135-199 8-79 (92)
17 cd05029 S-100A6 S-100A6: S-100 99.2 6.5E-11 1.4E-15 80.8 7.9 65 135-199 9-78 (88)
18 cd05026 S-100Z S-100Z: S-100Z 99.2 6.5E-11 1.4E-15 81.7 8.0 65 135-199 9-80 (93)
19 KOG0027|consensus 99.2 7.4E-11 1.6E-15 88.5 7.9 68 133-200 5-72 (151)
20 smart00027 EH Eps15 homology d 99.2 1E-10 2.2E-15 81.1 8.0 65 133-199 7-71 (96)
21 cd00052 EH Eps15 homology doma 99.2 1.3E-10 2.8E-15 74.7 7.2 59 139-199 2-60 (67)
22 cd00213 S-100 S-100: S-100 dom 99.1 1.4E-10 3.1E-15 79.0 6.7 68 133-200 5-79 (88)
23 PF13833 EF-hand_8: EF-hand do 99.1 2.1E-10 4.5E-15 70.9 6.7 52 149-200 1-53 (54)
24 cd05023 S-100A11 S-100A11: S-1 99.1 1E-09 2.2E-14 75.0 8.0 66 134-199 7-79 (89)
25 COG5126 FRQ1 Ca2+-binding prot 99.0 7.2E-10 1.6E-14 83.1 7.5 67 132-199 16-82 (160)
26 cd00051 EFh EF-hand, calcium b 99.0 1.2E-09 2.6E-14 68.1 7.4 61 138-198 2-62 (63)
27 cd00252 SPARC_EC SPARC_EC; ext 99.0 6.8E-09 1.5E-13 74.3 9.9 64 133-200 45-108 (116)
28 KOG0044|consensus 98.9 1.7E-08 3.8E-13 78.1 11.9 121 61-199 7-127 (193)
29 PF14658 EF-hand_9: EF-hand do 98.9 5.2E-09 1.1E-13 66.7 6.8 61 140-200 2-64 (66)
30 KOG0038|consensus 98.9 2E-08 4.2E-13 73.4 10.0 101 83-200 72-177 (189)
31 PTZ00183 centrin; Provisional 98.9 1.1E-08 2.3E-13 76.5 8.0 67 133-199 14-80 (158)
32 cd05030 calgranulins Calgranul 98.8 1E-08 2.3E-13 69.9 6.6 65 135-199 7-78 (88)
33 PLN02964 phosphatidylserine de 98.8 1.9E-08 4.1E-13 90.6 10.0 109 48-178 144-271 (644)
34 PTZ00184 calmodulin; Provision 98.8 1.4E-08 3.1E-13 74.9 7.8 67 133-199 8-74 (149)
35 KOG0028|consensus 98.8 1.7E-08 3.6E-13 74.8 6.9 67 133-199 30-96 (172)
36 PLN02964 phosphatidylserine de 98.7 1.6E-07 3.5E-12 84.7 11.2 123 60-200 118-243 (644)
37 KOG0041|consensus 98.6 2.5E-07 5.5E-12 71.0 7.7 65 135-199 98-162 (244)
38 KOG0030|consensus 98.6 1.7E-07 3.8E-12 67.9 6.3 69 131-199 6-76 (152)
39 KOG0031|consensus 98.6 2.2E-07 4.8E-12 68.5 6.8 62 133-198 29-90 (171)
40 KOG4223|consensus 98.5 4.1E-07 9E-12 74.6 7.2 129 53-196 169-301 (325)
41 PF00036 EF-hand_1: EF hand; 98.5 2.7E-07 5.9E-12 49.5 3.8 28 138-165 2-29 (29)
42 KOG0377|consensus 98.4 2.8E-06 6E-11 72.5 11.1 138 53-199 470-614 (631)
43 cd05024 S-100A10 S-100A10: A s 98.4 1.9E-06 4E-11 58.7 7.9 64 135-199 7-75 (91)
44 PF13405 EF-hand_6: EF-hand do 98.4 6.4E-07 1.4E-11 48.8 3.8 30 137-166 1-31 (31)
45 PF12763 EF-hand_4: Cytoskelet 98.3 4.4E-06 9.6E-11 58.6 8.1 63 133-198 7-69 (104)
46 KOG4223|consensus 98.3 4E-06 8.8E-11 68.9 8.0 139 52-199 82-227 (325)
47 PF00036 EF-hand_1: EF hand; 98.2 1.5E-06 3.2E-11 46.6 3.3 28 173-200 1-28 (29)
48 KOG0604|consensus 98.2 8.9E-07 1.9E-11 72.6 2.8 81 17-101 243-328 (400)
49 KOG0036|consensus 98.1 1.1E-05 2.4E-10 68.3 7.6 67 133-199 11-78 (463)
50 PF14788 EF-hand_10: EF hand; 98.1 1.3E-05 2.9E-10 48.3 5.8 48 152-199 1-48 (51)
51 KOG0037|consensus 98.1 1.5E-05 3.2E-10 62.3 7.6 86 51-160 128-216 (221)
52 PF10591 SPARC_Ca_bdg: Secrete 98.0 6.7E-06 1.4E-10 58.6 4.3 63 133-197 51-113 (113)
53 PF13833 EF-hand_8: EF-hand do 98.0 2.1E-05 4.5E-10 48.2 5.8 48 61-115 3-51 (54)
54 KOG0033|consensus 98.0 5.2E-06 1.1E-10 66.6 3.8 80 18-101 193-273 (355)
55 PF13499 EF-hand_7: EF-hand do 98.0 2.1E-05 4.6E-10 50.1 6.1 65 84-162 2-66 (66)
56 KOG0032|consensus 98.0 2.1E-05 4.5E-10 67.6 7.4 83 15-101 216-299 (382)
57 PRK12309 transaldolase/EF-hand 98.0 1.5E-05 3.2E-10 68.4 6.4 56 131-199 329-384 (391)
58 PF13202 EF-hand_5: EF hand; P 97.9 1.4E-05 3.1E-10 41.2 3.2 24 138-161 1-24 (25)
59 cd05022 S-100A13 S-100A13: S-1 97.9 1.7E-05 3.6E-10 54.1 4.2 59 50-115 11-73 (89)
60 cd05027 S-100B S-100B: S-100B 97.8 4.4E-05 9.5E-10 52.0 4.9 60 49-115 10-77 (88)
61 KOG0046|consensus 97.7 9.6E-05 2.1E-09 64.4 7.0 66 133-199 16-84 (627)
62 KOG0615|consensus 97.7 4.9E-06 1.1E-10 70.7 -1.0 83 17-103 361-445 (475)
63 PF14658 EF-hand_9: EF-hand do 97.6 0.00022 4.8E-09 45.5 5.7 58 52-115 3-62 (66)
64 cd05029 S-100A6 S-100A6: S-100 97.6 0.00011 2.4E-09 49.9 4.6 57 52-115 15-77 (88)
65 KOG0034|consensus 97.5 0.0013 2.8E-08 51.0 9.9 82 103-199 48-131 (187)
66 PF13202 EF-hand_5: EF hand; P 97.5 0.00016 3.4E-09 37.2 3.3 25 174-198 1-25 (25)
67 KOG0040|consensus 97.5 0.0002 4.4E-09 69.0 6.2 68 133-200 2250-2324(2399)
68 cd05031 S-100A10_like S-100A10 97.5 0.00017 3.6E-09 49.5 4.4 61 49-116 10-78 (94)
69 cd00051 EFh EF-hand, calcium b 97.5 0.00076 1.6E-08 41.1 6.6 61 84-162 2-62 (63)
70 KOG0607|consensus 97.4 9.8E-05 2.1E-09 61.4 3.1 78 18-99 272-365 (463)
71 KOG2643|consensus 97.4 0.0018 4E-08 55.5 10.6 134 48-198 234-382 (489)
72 KOG2643|consensus 97.4 0.00048 1E-08 59.0 7.1 126 55-200 327-453 (489)
73 cd05025 S-100A1 S-100A1: S-100 97.4 0.00026 5.7E-09 48.4 4.6 60 49-115 11-78 (92)
74 cd00052 EH Eps15 homology doma 97.4 0.00044 9.6E-09 43.8 5.4 55 52-115 4-59 (67)
75 cd05026 S-100Z S-100Z: S-100Z 97.3 0.00039 8.5E-09 47.7 4.5 59 50-115 13-79 (93)
76 KOG0040|consensus 97.3 0.0015 3.3E-08 63.2 9.6 125 51-199 2257-2397(2399)
77 smart00027 EH Eps15 homology d 97.3 0.00079 1.7E-08 46.3 6.0 71 83-173 11-86 (96)
78 cd00252 SPARC_EC SPARC_EC; ext 97.3 0.0011 2.4E-08 47.4 6.3 61 81-163 47-107 (116)
79 KOG2562|consensus 97.2 0.0011 2.5E-08 57.1 7.0 126 55-197 286-421 (493)
80 PF13405 EF-hand_6: EF-hand do 97.2 0.00067 1.5E-08 36.6 3.4 27 173-199 1-27 (31)
81 KOG4666|consensus 97.2 0.00083 1.8E-08 55.6 5.4 98 83-199 260-358 (412)
82 KOG4251|consensus 97.0 0.00038 8.3E-09 55.5 2.2 66 133-198 98-166 (362)
83 smart00054 EFh EF-hand, calciu 97.0 0.00098 2.1E-08 33.9 2.9 27 138-164 2-28 (29)
84 cd00213 S-100 S-100: S-100 dom 96.9 0.0016 3.4E-08 44.0 4.4 60 49-115 10-77 (88)
85 PF09279 EF-hand_like: Phospho 96.9 0.0031 6.6E-08 42.1 5.8 63 137-200 1-69 (83)
86 cd05030 calgranulins Calgranul 96.7 0.0043 9.3E-08 42.1 5.1 57 52-115 13-77 (88)
87 cd05023 S-100A11 S-100A11: S-1 96.7 0.018 3.8E-07 39.2 8.0 71 84-166 11-82 (89)
88 KOG4065|consensus 96.6 0.0049 1.1E-07 43.6 5.0 59 139-197 70-142 (144)
89 KOG0751|consensus 96.5 0.034 7.5E-07 48.7 10.1 84 63-166 53-138 (694)
90 smart00054 EFh EF-hand, calciu 96.4 0.0042 9.1E-08 31.4 2.9 28 173-200 1-28 (29)
91 cd05024 S-100A10 S-100A10: A s 96.3 0.011 2.4E-07 40.3 5.3 56 53-115 14-74 (91)
92 PF14788 EF-hand_10: EF hand; 96.2 0.021 4.5E-07 34.5 5.4 33 133-165 18-50 (51)
93 PRK12309 transaldolase/EF-hand 96.1 0.025 5.3E-07 48.9 7.3 57 77-164 329-385 (391)
94 KOG1029|consensus 95.9 0.012 2.5E-07 54.0 4.8 64 133-198 192-255 (1118)
95 KOG2562|consensus 95.7 0.056 1.2E-06 47.0 8.0 94 103-199 239-342 (493)
96 KOG0751|consensus 95.6 0.15 3.1E-06 45.0 10.1 138 49-195 76-239 (694)
97 KOG0041|consensus 95.6 0.02 4.4E-07 44.5 4.3 98 49-162 101-201 (244)
98 KOG3555|consensus 95.6 0.018 3.9E-07 48.2 4.3 64 133-200 247-310 (434)
99 PF08726 EFhand_Ca_insen: Ca2+ 95.4 0.0082 1.8E-07 38.8 1.2 58 133-198 3-67 (69)
100 KOG0599|consensus 95.3 0.0085 1.8E-07 49.2 1.5 77 19-99 210-287 (411)
101 KOG4251|consensus 95.3 0.076 1.7E-06 42.6 6.7 58 139-196 284-341 (362)
102 PF05517 p25-alpha: p25-alpha 94.8 0.25 5.4E-06 37.1 8.1 63 137-199 3-68 (154)
103 KOG0377|consensus 94.8 0.16 3.4E-06 44.2 7.6 87 63-165 530-616 (631)
104 KOG4578|consensus 94.7 0.022 4.8E-07 47.4 2.3 63 135-199 332-397 (421)
105 KOG1955|consensus 94.7 0.072 1.6E-06 46.8 5.5 64 133-198 228-291 (737)
106 KOG0583|consensus 94.3 0.039 8.4E-07 47.4 3.1 77 16-100 202-280 (370)
107 KOG4236|consensus 94.0 0.01 2.2E-07 52.8 -1.0 77 19-100 748-824 (888)
108 PF12763 EF-hand_4: Cytoskelet 93.6 0.12 2.5E-06 36.2 3.9 59 48-115 11-69 (104)
109 KOG0605|consensus 93.4 0.05 1.1E-06 48.1 2.2 85 18-110 369-455 (550)
110 KOG0169|consensus 93.4 0.73 1.6E-05 42.6 9.5 127 52-200 141-274 (746)
111 KOG0042|consensus 93.0 0.18 3.9E-06 45.1 5.0 67 133-199 590-656 (680)
112 KOG2243|consensus 93.0 0.19 4.1E-06 49.3 5.3 58 141-199 4062-4119(5019)
113 KOG4717|consensus 93.0 0.16 3.4E-06 45.4 4.5 82 15-103 197-278 (864)
114 KOG0035|consensus 92.6 0.28 6.1E-06 46.2 5.8 68 133-200 744-816 (890)
115 PF14513 DAG_kinase_N: Diacylg 92.2 0.57 1.2E-05 34.5 6.0 80 58-149 3-82 (138)
116 KOG1707|consensus 91.9 1.2 2.5E-05 40.3 8.6 138 52-197 200-374 (625)
117 PLN02952 phosphoinositide phos 91.8 1.6 3.6E-05 39.8 9.6 88 103-200 14-110 (599)
118 KOG0169|consensus 91.3 0.42 9.2E-06 44.1 5.4 66 134-199 134-199 (746)
119 KOG3866|consensus 91.1 0.38 8.1E-06 40.0 4.4 58 141-198 249-322 (442)
120 PF10591 SPARC_Ca_bdg: Secrete 90.7 0.49 1.1E-05 33.6 4.2 59 82-160 54-112 (113)
121 PF05042 Caleosin: Caleosin re 90.4 1.2 2.6E-05 33.9 6.3 64 137-200 8-124 (174)
122 KOG4347|consensus 90.1 2.5 5.4E-05 38.6 9.0 124 63-192 480-610 (671)
123 KOG0580|consensus 89.8 0.25 5.5E-06 39.9 2.3 75 19-100 204-278 (281)
124 KOG0603|consensus 89.3 0.4 8.7E-06 43.4 3.4 76 15-98 491-566 (612)
125 cd06617 PKc_MKK3_6 Catalytic d 89.2 0.57 1.2E-05 37.5 4.1 90 17-112 187-278 (283)
126 cd06619 PKc_MKK5 Catalytic dom 88.6 0.87 1.9E-05 36.6 4.8 89 17-109 173-267 (279)
127 KOG4666|consensus 88.1 1.2 2.6E-05 37.4 5.2 65 135-199 258-323 (412)
128 PF03672 UPF0154: Uncharacteri 87.9 1.3 2.9E-05 28.0 4.2 33 59-91 28-60 (64)
129 PRK00523 hypothetical protein; 87.9 1.3 2.7E-05 28.7 4.1 34 58-91 35-68 (72)
130 PF09069 EF-hand_3: EF-hand; 87.6 6.1 0.00013 26.9 7.6 63 135-200 2-75 (90)
131 KOG0588|consensus 87.2 0.55 1.2E-05 43.1 3.0 75 17-101 192-269 (786)
132 COG3763 Uncharacterized protei 86.9 1.6 3.5E-05 28.0 4.1 34 58-91 34-67 (71)
133 cd07848 STKc_CDKL5 Catalytic d 86.8 0.93 2E-05 36.5 4.0 79 16-98 180-287 (287)
134 PRK01844 hypothetical protein; 85.8 1.9 4.2E-05 27.9 4.1 34 58-91 34-67 (72)
135 cd06622 PKc_MAPKK_PBS2_like Ca 85.0 1.3 2.9E-05 35.6 4.0 92 17-112 187-279 (286)
136 cd05631 STKc_GRK4 Catalytic do 84.9 1.6 3.4E-05 35.3 4.5 88 16-112 180-273 (285)
137 KOG0598|consensus 84.5 1.7 3.7E-05 36.9 4.4 88 16-112 204-293 (357)
138 KOG0616|consensus 83.9 0.68 1.5E-05 38.6 1.8 86 17-112 221-309 (355)
139 cd05633 STKc_GRK3 Catalytic do 83.8 2.3 5E-05 34.3 5.0 80 16-99 175-259 (279)
140 cd05608 STKc_GRK1 Catalytic do 83.1 2 4.4E-05 34.6 4.3 79 17-99 177-261 (280)
141 cd05614 STKc_MSK2_N N-terminal 83.0 1.1 2.4E-05 37.1 2.9 80 16-99 186-271 (332)
142 KOG0575|consensus 82.8 0.74 1.6E-05 41.5 1.8 78 14-98 195-272 (592)
143 PHA03390 pk1 serine/threonine- 82.7 2.2 4.8E-05 34.1 4.4 80 16-99 185-266 (267)
144 KOG1265|consensus 82.4 22 0.00047 34.1 10.9 66 135-200 220-299 (1189)
145 KOG0038|consensus 81.8 2.1 4.5E-05 31.9 3.5 66 131-199 69-135 (189)
146 cd06609 STKc_MST3_like Catalyt 81.3 2.1 4.5E-05 34.2 3.7 82 16-102 177-258 (274)
147 cd06608 STKc_myosinIII_like Ca 81.1 1.9 4E-05 34.1 3.4 76 17-98 198-275 (275)
148 cd06631 STKc_YSK4 Catalytic do 80.9 2.2 4.8E-05 33.7 3.8 79 16-98 187-265 (265)
149 cd07871 STKc_PCTAIRE3 Catalyti 80.6 1.2 2.6E-05 36.1 2.1 79 16-98 183-288 (288)
150 cd05577 STKc_GRK Catalytic dom 80.6 3.3 7.1E-05 33.2 4.7 79 17-99 174-258 (277)
151 KOG0585|consensus 80.2 1.7 3.7E-05 38.5 3.0 81 19-105 301-382 (576)
152 cd06656 STKc_PAK3 Catalytic do 80.1 3.1 6.6E-05 33.9 4.4 80 16-100 194-274 (297)
153 cd06643 STKc_SLK Catalytic dom 80.0 2.4 5.1E-05 34.0 3.7 81 17-101 188-268 (282)
154 PTZ00036 glycogen synthase kin 79.6 0.78 1.7E-05 40.1 0.8 82 16-101 250-357 (440)
155 cd07861 STKc_CDK1_euk Catalyti 79.1 2.4 5.2E-05 33.9 3.5 78 17-98 182-285 (285)
156 cd07835 STKc_CDK1_like Catalyt 78.9 2.8 6.1E-05 33.5 3.8 78 17-98 180-283 (283)
157 cd06616 PKc_MKK4 Catalytic dom 78.7 3.6 7.7E-05 33.0 4.4 82 16-101 189-273 (288)
158 KOG1029|consensus 78.4 6.9 0.00015 36.7 6.3 57 139-198 19-75 (1118)
159 PLN00034 mitogen-activated pro 77.8 3.3 7.1E-05 34.7 4.1 80 17-100 253-333 (353)
160 KOG0035|consensus 77.3 8.4 0.00018 36.8 6.7 93 50-160 750-848 (890)
161 KOG0581|consensus 77.3 2.1 4.6E-05 36.4 2.7 92 18-115 258-355 (364)
162 PLN02222 phosphoinositide phos 77.0 10 0.00022 34.7 7.0 66 133-200 22-90 (581)
163 cd06639 STKc_myosinIIIB Cataly 77.0 2.8 6.1E-05 33.8 3.3 77 16-98 212-290 (291)
164 cd06605 PKc_MAPKK Catalytic do 76.6 3 6.5E-05 32.9 3.3 81 17-101 179-263 (265)
165 cd05605 STKc_GRK4_like Catalyt 76.4 4.5 9.7E-05 32.6 4.4 79 17-99 181-265 (285)
166 PTZ00426 cAMP-dependent protei 76.1 2.9 6.2E-05 35.1 3.2 80 16-99 207-288 (340)
167 cd05630 STKc_GRK6 Catalytic do 76.0 2.8 6.2E-05 33.8 3.1 79 17-99 181-265 (285)
168 cd06647 STKc_PAK_I Catalytic d 75.8 4.2 9.1E-05 33.0 4.1 81 16-100 194-274 (293)
169 PLN02228 Phosphoinositide phos 75.6 14 0.00031 33.6 7.6 69 130-200 18-92 (567)
170 PF07308 DUF1456: Protein of u 75.5 10 0.00022 24.3 4.9 33 153-185 14-46 (68)
171 cd06612 STKc_MST1_2 Catalytic 75.4 4.3 9.3E-05 31.7 3.9 77 17-98 179-256 (256)
172 cd06654 STKc_PAK1 Catalytic do 75.3 3.9 8.4E-05 33.3 3.7 80 16-100 195-275 (296)
173 cd05628 STKc_NDR1 Catalytic do 75.1 2.7 5.9E-05 35.4 2.9 82 16-99 215-297 (363)
174 KOG0998|consensus 74.9 1.2 2.6E-05 42.5 0.6 64 133-198 280-343 (847)
175 PLN02230 phosphoinositide phos 74.8 14 0.0003 33.9 7.3 70 130-200 23-102 (598)
176 PTZ00284 protein kinase; Provi 74.4 1.3 2.8E-05 38.9 0.8 32 66-101 413-444 (467)
177 cd06624 STKc_ASK Catalytic dom 74.4 5 0.00011 31.8 4.1 79 16-98 190-268 (268)
178 cd07863 STKc_CDK4 Catalytic do 74.0 2.5 5.5E-05 33.9 2.3 79 16-98 186-288 (288)
179 cd05607 STKc_GRK7 Catalytic do 73.9 3.8 8.3E-05 32.9 3.3 79 17-99 174-258 (277)
180 KOG3449|consensus 73.9 12 0.00026 26.3 5.2 44 139-182 4-47 (112)
181 cd07873 STKc_PCTAIRE1 Catalyti 73.9 5.6 0.00012 32.3 4.3 80 17-100 185-291 (301)
182 cd06649 PKc_MEK2 Catalytic dom 73.9 4.5 9.8E-05 33.5 3.8 48 62-113 272-319 (331)
183 cd06655 STKc_PAK2 Catalytic do 73.3 3.5 7.5E-05 33.6 3.0 81 16-100 194-274 (296)
184 PF07879 PHB_acc_N: PHB/PHA ac 73.2 8.3 0.00018 24.4 3.9 41 143-183 10-60 (64)
185 KOG2871|consensus 73.0 5.5 0.00012 34.1 4.0 46 133-178 306-351 (449)
186 cd06637 STKc_TNIK Catalytic do 72.5 5.1 0.00011 31.7 3.7 77 17-98 196-272 (272)
187 PLN03225 Serine/threonine-prot 72.4 9.6 0.00021 34.7 5.8 120 66-198 425-546 (566)
188 KOG0046|consensus 72.1 4.4 9.6E-05 36.2 3.4 59 52-117 24-85 (627)
189 cd07869 STKc_PFTAIRE1 Catalyti 72.0 6.2 0.00013 32.1 4.2 80 17-100 184-293 (303)
190 cd05613 STKc_MSK1_N N-terminal 71.8 9.8 0.00021 30.5 5.3 79 16-99 187-272 (290)
191 cd08218 STKc_Nek1 Catalytic do 71.7 4.3 9.3E-05 31.8 3.1 76 17-98 181-256 (256)
192 cd06610 STKc_OSR1_SPAK Catalyt 71.5 6.7 0.00014 30.8 4.2 76 17-98 187-267 (267)
193 cd05591 STKc_nPKC_epsilon Cata 71.4 4 8.7E-05 33.6 3.0 76 16-98 175-257 (321)
194 cd08225 STKc_Nek5 Catalytic do 71.3 5.4 0.00012 31.1 3.6 77 16-98 181-257 (257)
195 cd07872 STKc_PCTAIRE2 Catalyti 70.9 2.8 6.2E-05 34.2 1.9 81 16-100 184-291 (309)
196 cd05596 STKc_ROCK Catalytic do 70.9 2.7 5.9E-05 35.6 1.9 83 16-100 226-309 (370)
197 cd06611 STKc_SLK_like Catalyti 70.8 5.1 0.00011 32.0 3.4 80 17-100 188-267 (280)
198 cd05606 STKc_beta_ARK Catalyti 70.8 7.2 0.00016 31.3 4.3 79 16-99 175-259 (278)
199 cd05570 STKc_PKC Catalytic dom 70.7 3.4 7.3E-05 34.1 2.4 77 16-99 175-256 (318)
200 KOG4578|consensus 70.5 3.4 7.4E-05 34.8 2.3 32 133-164 367-398 (421)
201 cd06636 STKc_MAP4K4_6 Catalyti 70.1 7.6 0.00016 31.0 4.3 77 17-98 206-282 (282)
202 PLN02223 phosphoinositide phos 70.1 17 0.00036 32.9 6.6 70 130-200 10-92 (537)
203 cd07868 STKc_CDK8 Catalytic do 70.0 6.9 0.00015 31.9 4.1 32 63-98 286-317 (317)
204 cd06618 PKc_MKK7 Catalytic dom 70.0 7.6 0.00016 31.4 4.3 81 17-102 198-280 (296)
205 TIGR01848 PHA_reg_PhaR polyhyd 69.9 18 0.00038 25.4 5.3 50 143-192 10-69 (107)
206 cd06606 STKc_MAPKKK Catalytic 69.7 6.1 0.00013 30.6 3.5 77 17-98 183-260 (260)
207 cd06626 STKc_MEKK4 Catalytic d 69.7 6.1 0.00013 31.0 3.6 78 16-98 185-264 (264)
208 cd06917 STKc_NAK1_like Catalyt 69.4 7.7 0.00017 30.8 4.1 81 16-101 181-261 (277)
209 cd07845 STKc_CDK10 Catalytic d 68.7 4.5 9.8E-05 32.9 2.7 80 16-99 188-294 (309)
210 cd05612 STKc_PRKX_like Catalyt 68.4 7.8 0.00017 31.3 4.0 76 16-99 177-258 (291)
211 cd05599 STKc_NDR_like Catalyti 68.2 3.5 7.5E-05 34.6 1.9 79 16-99 218-300 (364)
212 cd07841 STKc_CDK7 Catalytic do 67.5 4.6 0.0001 32.6 2.5 82 16-101 182-288 (298)
213 cd07860 STKc_CDK2_3 Catalytic 67.5 3.8 8.2E-05 32.8 2.0 78 17-98 181-284 (284)
214 cd06648 STKc_PAK_II Catalytic 67.5 7.8 0.00017 31.2 3.8 81 18-102 196-276 (285)
215 cd06615 PKc_MEK Catalytic doma 67.3 12 0.00025 30.6 4.9 45 63-111 259-303 (308)
216 cd06644 STKc_STK10_LOK Catalyt 67.2 6.7 0.00014 31.6 3.4 76 17-99 195-273 (292)
217 cd07867 STKc_CDC2L6 Catalytic 67.1 9.1 0.0002 31.1 4.2 26 16-41 195-220 (317)
218 cd05625 STKc_LATS1 Catalytic d 67.0 4.4 9.5E-05 34.4 2.3 79 16-99 227-309 (382)
219 cd05590 STKc_nPKC_eta Catalyti 66.9 4.3 9.3E-05 33.5 2.2 77 16-99 175-257 (320)
220 cd07862 STKc_CDK6 Catalytic do 66.4 5.4 0.00012 32.0 2.7 79 16-98 188-290 (290)
221 KOG0608|consensus 66.4 12 0.00026 34.8 5.0 85 18-110 852-938 (1034)
222 cd06630 STKc_MEKK1 Catalytic d 66.2 8.8 0.00019 30.2 3.9 79 16-98 187-267 (268)
223 cd05573 STKc_ROCK_NDR_like Cat 65.9 4.1 8.9E-05 33.8 1.9 79 16-99 209-289 (350)
224 cd05578 STKc_Yank1 Catalytic d 65.8 7.4 0.00016 30.6 3.3 78 16-98 178-258 (258)
225 cd06621 PKc_MAPKK_Pek1_like Ca 65.6 7.6 0.00016 31.2 3.4 92 17-112 183-283 (287)
226 cd07837 STKc_CdkB_plant Cataly 65.6 6.1 0.00013 31.7 2.9 79 16-98 191-294 (295)
227 cd05617 STKc_aPKC_zeta Catalyt 65.3 7.9 0.00017 32.0 3.5 80 16-99 175-264 (327)
228 cd05600 STKc_Sid2p_Dbf2p Catal 64.5 4 8.7E-05 33.8 1.6 80 16-99 177-261 (333)
229 cd05626 STKc_LATS2 Catalytic d 64.3 4.2 9E-05 34.6 1.7 82 16-99 227-309 (381)
230 cd05584 STKc_p70S6K Catalytic 64.0 6.8 0.00015 32.3 2.9 77 16-99 179-260 (323)
231 cd05627 STKc_NDR2 Catalytic do 63.8 2.4 5.2E-05 35.6 0.1 88 16-110 215-303 (360)
232 cd07844 STKc_PCTAIRE_like Cata 63.7 10 0.00022 30.4 3.8 78 17-98 184-291 (291)
233 cd07313 terB_like_2 tellurium 63.2 12 0.00025 25.5 3.5 49 150-198 13-63 (104)
234 cd07829 STKc_CDK_like Catalyti 62.9 9.6 0.00021 30.2 3.5 78 17-98 179-282 (282)
235 cd08215 STKc_Nek Catalytic dom 62.9 11 0.00024 29.1 3.8 76 17-98 183-258 (258)
236 cd05595 STKc_PKB_beta Catalyti 62.6 8.6 0.00019 31.7 3.3 76 16-99 174-255 (323)
237 cd05574 STKc_phototropin_like 62.5 8.8 0.00019 31.3 3.3 77 17-99 212-293 (316)
238 cd08216 PK_STRAD Pseudokinase 62.1 6 0.00013 32.2 2.2 80 16-99 189-299 (314)
239 cd06628 STKc_MAPKKK_Byr2_like 61.8 10 0.00022 29.9 3.4 75 17-98 192-267 (267)
240 cd07876 STKc_JNK2 Catalytic do 61.8 10 0.00022 31.7 3.6 33 63-99 287-319 (359)
241 cd05118 STKc_CMGC Catalytic do 61.7 8.8 0.00019 30.4 3.1 78 17-98 179-283 (283)
242 cd05598 STKc_LATS Catalytic do 61.7 3.4 7.4E-05 34.9 0.7 78 17-99 224-305 (376)
243 cd06638 STKc_myosinIIIA Cataly 61.7 10 0.00023 30.2 3.5 73 16-98 208-286 (286)
244 PF07499 RuvA_C: RuvA, C-termi 61.5 30 0.00065 20.1 4.7 40 155-198 3-42 (47)
245 cd05588 STKc_aPKC Catalytic do 61.2 11 0.00024 31.1 3.7 79 17-99 176-266 (329)
246 cd07842 STKc_CDK8_like Catalyt 61.2 15 0.00033 29.7 4.4 33 62-98 284-316 (316)
247 PF00404 Dockerin_1: Dockerin 60.9 11 0.00025 18.2 2.2 16 146-161 1-16 (21)
248 KOG1707|consensus 60.6 16 0.00035 33.2 4.7 65 132-196 191-261 (625)
249 cd06658 STKc_PAK5 Catalytic do 60.6 9.6 0.00021 30.9 3.2 82 16-101 197-278 (292)
250 cd05576 STKc_RPK118_like Catal 60.5 15 0.00032 28.6 4.2 72 16-98 161-237 (237)
251 cd07875 STKc_JNK1 Catalytic do 60.4 10 0.00022 31.8 3.4 80 16-99 204-322 (364)
252 KOG0592|consensus 60.4 11 0.00024 34.0 3.6 82 16-110 266-348 (604)
253 cd06659 STKc_PAK6 Catalytic do 60.1 9.5 0.00021 31.0 3.1 80 17-100 197-276 (297)
254 cd05620 STKc_nPKC_delta Cataly 59.9 7.5 0.00016 32.0 2.4 76 16-99 175-252 (316)
255 KOG4004|consensus 59.8 3.5 7.5E-05 32.3 0.4 54 142-198 193-248 (259)
256 cd07831 STKc_MOK Catalytic dom 59.7 9.8 0.00021 30.2 3.0 79 16-98 178-282 (282)
257 cd06623 PKc_MAPKK_plant_like C 59.6 9.6 0.00021 29.8 2.9 79 17-99 180-260 (264)
258 cd06657 STKc_PAK4 Catalytic do 59.1 8.9 0.00019 31.1 2.7 81 16-100 195-275 (292)
259 PTZ00373 60S Acidic ribosomal 58.9 35 0.00076 24.2 5.3 42 141-182 8-49 (112)
260 cd05572 STKc_cGK_PKG Catalytic 58.7 12 0.00026 29.4 3.4 78 17-99 172-256 (262)
261 cd06629 STKc_MAPKKK_Bck1_like 58.5 14 0.0003 29.2 3.7 78 17-98 192-272 (272)
262 KOG0586|consensus 58.4 5.7 0.00012 36.1 1.5 78 15-99 233-310 (596)
263 KOG1955|consensus 58.3 30 0.00065 31.0 5.8 32 133-164 262-293 (737)
264 cd08220 STKc_Nek8 Catalytic do 58.2 16 0.00034 28.5 3.9 76 17-98 181-256 (256)
265 cd05593 STKc_PKB_gamma Catalyt 58.1 12 0.00025 31.1 3.3 76 16-99 174-255 (328)
266 cd05571 STKc_PKB Catalytic dom 58.0 7.5 0.00016 32.1 2.1 76 16-99 174-255 (323)
267 cd07874 STKc_JNK3 Catalytic do 57.9 20 0.00042 29.9 4.7 33 63-99 283-315 (355)
268 COG1423 ATP-dependent DNA liga 57.7 66 0.0014 27.6 7.5 46 50-95 168-225 (382)
269 cd05619 STKc_nPKC_theta Cataly 57.7 11 0.00023 31.1 3.0 76 16-99 175-252 (316)
270 KOG3555|consensus 57.4 15 0.00033 31.2 3.7 44 133-177 279-322 (434)
271 cd05586 STKc_Sck1_like Catalyt 57.0 3.3 7.1E-05 34.3 -0.2 78 16-99 176-257 (330)
272 PLN00009 cyclin-dependent kina 57.0 9 0.00019 30.8 2.4 81 16-100 183-289 (294)
273 cd05589 STKc_PKN Catalytic dom 56.9 14 0.00029 30.5 3.5 76 17-99 181-261 (324)
274 PF14513 DAG_kinase_N: Diacylg 56.8 11 0.00025 27.7 2.6 48 150-199 5-59 (138)
275 cd05587 STKc_cPKC Catalytic do 56.1 12 0.00025 30.9 3.0 76 16-98 180-260 (324)
276 cd05632 STKc_GRK5 Catalytic do 56.0 9.9 0.00022 30.6 2.5 80 16-99 180-265 (285)
277 cd07847 STKc_CDKL1_4 Catalytic 55.6 9.9 0.00021 30.2 2.4 78 17-98 181-286 (286)
278 PF05042 Caleosin: Caleosin re 55.5 59 0.0013 24.9 6.3 136 53-196 13-162 (174)
279 PF09068 EF-hand_2: EF hand; 55.4 76 0.0016 22.9 10.4 91 104-198 13-123 (127)
280 PF09279 EF-hand_like: Phospho 55.0 19 0.00041 23.4 3.3 26 173-199 1-26 (83)
281 PF03672 UPF0154: Uncharacteri 54.7 30 0.00064 21.9 3.9 33 150-182 29-61 (64)
282 cd05622 STKc_ROCK1 Catalytic d 54.6 6.9 0.00015 33.2 1.4 83 16-100 226-309 (371)
283 cd08227 PK_STRAD_alpha Pseudok 54.6 16 0.00034 30.1 3.5 34 63-100 279-312 (327)
284 cd05616 STKc_cPKC_beta Catalyt 54.4 12 0.00026 30.8 2.7 85 16-112 180-269 (323)
285 cd06633 STKc_TAO3 Catalytic do 54.4 16 0.00034 29.9 3.5 80 17-101 200-279 (313)
286 cd08222 STKc_Nek11 Catalytic d 54.3 17 0.00036 28.5 3.5 76 17-98 185-260 (260)
287 PLN03224 probable serine/threo 54.3 14 0.0003 33.3 3.3 80 17-99 412-504 (507)
288 cd07864 STKc_CDK12 Catalytic d 54.2 23 0.00051 28.4 4.5 79 16-98 197-302 (302)
289 PF08461 HTH_12: Ribonuclease 54.2 17 0.00038 22.9 2.9 38 148-185 9-46 (66)
290 cd08217 STKc_Nek2 Catalytic do 54.2 15 0.00032 28.6 3.2 74 17-97 190-264 (265)
291 PTZ00263 protein kinase A cata 54.0 9.6 0.00021 31.6 2.1 78 16-99 194-275 (329)
292 cd07853 STKc_NLK Catalytic dom 53.7 23 0.0005 29.8 4.5 81 16-100 184-293 (372)
293 cd08315 Death_TRAILR_DR4_DR5 D 53.4 70 0.0015 21.8 6.0 26 153-178 65-90 (96)
294 cd07858 STKc_TEY_MAPK_plant Ca 53.3 11 0.00024 31.2 2.5 80 16-99 188-295 (337)
295 cd05621 STKc_ROCK2 Catalytic d 53.1 6.3 0.00014 33.5 0.9 83 16-100 226-309 (370)
296 cd08529 STKc_FA2-like Catalyti 52.9 17 0.00036 28.3 3.3 75 17-97 181-255 (256)
297 PF01885 PTS_2-RNA: RNA 2'-pho 52.8 29 0.00063 26.8 4.5 37 146-182 26-62 (186)
298 cd07878 STKc_p38beta_MAPK11 Ca 52.4 12 0.00025 31.1 2.4 81 16-100 195-303 (343)
299 TIGR01639 P_fal_TIGR01639 Plas 52.1 34 0.00074 21.3 3.9 32 151-182 8-39 (61)
300 cd07865 STKc_CDK9 Catalytic do 52.0 15 0.00032 29.6 2.9 79 16-98 203-310 (310)
301 cd05611 STKc_Rim15_like Cataly 51.9 18 0.00039 28.4 3.3 80 16-99 172-255 (260)
302 cd05581 STKc_PDK1 Catalytic do 51.7 14 0.00029 29.2 2.6 75 17-98 202-280 (280)
303 cd06650 PKc_MEK1 Catalytic dom 51.6 22 0.00047 29.5 3.9 37 63-103 271-307 (333)
304 cd05833 Ribosomal_P2 Ribosomal 51.6 53 0.0012 23.1 5.3 51 141-196 6-56 (109)
305 cd05585 STKc_YPK1_like Catalyt 51.4 15 0.00033 30.0 2.9 77 16-99 172-251 (312)
306 cd05122 PKc_STE Catalytic doma 51.3 19 0.00042 27.5 3.4 76 17-97 177-253 (253)
307 cd06627 STKc_Cdc7_like Catalyt 51.1 21 0.00046 27.6 3.6 76 17-98 179-254 (254)
308 cd05618 STKc_aPKC_iota Catalyt 50.8 14 0.00031 30.5 2.7 80 16-99 175-266 (329)
309 cd04411 Ribosomal_P1_P2_L12p R 50.5 77 0.0017 22.1 5.9 39 153-196 17-55 (105)
310 COG3763 Uncharacterized protei 50.4 39 0.00084 21.8 3.9 33 150-182 36-68 (71)
311 cd07851 STKc_p38 Catalytic dom 50.1 23 0.00051 29.4 3.9 79 16-101 195-304 (343)
312 PF11116 DUF2624: Protein of u 49.8 77 0.0017 21.3 5.9 32 152-183 14-45 (85)
313 smart00220 S_TKc Serine/Threon 49.8 22 0.00047 27.0 3.4 76 17-98 166-244 (244)
314 cd07843 STKc_CDC2L1 Catalytic 49.7 30 0.00065 27.7 4.4 79 16-98 186-293 (293)
315 cd06632 STKc_MEKK1_plant Catal 49.6 21 0.00046 27.7 3.4 77 17-98 182-258 (258)
316 PRK00523 hypothetical protein; 49.3 38 0.00083 21.9 3.8 33 150-182 37-69 (72)
317 KOG0610|consensus 49.2 38 0.00081 29.8 4.9 84 17-109 315-401 (459)
318 TIGR03573 WbuX N-acetyl sugar 49.2 42 0.00091 28.5 5.3 44 149-198 299-342 (343)
319 cd05601 STKc_CRIK Catalytic do 48.9 7.1 0.00015 32.2 0.6 79 16-99 188-267 (330)
320 cd00086 homeodomain Homeodomai 48.9 54 0.0012 19.3 4.9 41 133-180 10-50 (59)
321 cd06625 STKc_MEKK3_like Cataly 48.6 20 0.00044 28.0 3.1 77 16-98 186-263 (263)
322 KOG2301|consensus 48.4 20 0.00043 36.8 3.6 89 110-199 1391-1483(1592)
323 cd06614 STKc_PAK Catalytic dom 48.0 16 0.00034 29.3 2.5 79 17-100 196-275 (286)
324 cd05580 STKc_PKA Catalytic dom 47.9 38 0.00082 27.1 4.7 79 16-98 177-257 (290)
325 KOG0039|consensus 47.5 38 0.00083 31.5 5.1 66 132-198 14-87 (646)
326 cd07846 STKc_CDKL2_3 Catalytic 47.4 23 0.0005 28.1 3.4 78 17-98 181-286 (286)
327 cd05629 STKc_NDR_like_fungal C 47.4 7 0.00015 33.0 0.3 82 16-99 227-309 (377)
328 cd07849 STKc_ERK1_2_like Catal 46.2 24 0.00052 29.1 3.4 81 17-101 190-298 (336)
329 cd06645 STKc_MAP4K3 Catalytic 46.1 36 0.00078 26.7 4.3 76 17-97 189-267 (267)
330 cd05623 STKc_MRCK_alpha Cataly 46.0 14 0.0003 30.6 1.9 81 16-99 187-270 (332)
331 COG2818 Tag 3-methyladenine DN 45.9 31 0.00066 26.8 3.5 43 135-177 54-96 (188)
332 PRK00819 RNA 2'-phosphotransfe 45.6 48 0.001 25.5 4.6 37 146-182 27-63 (179)
333 cd06651 STKc_MEKK3 Catalytic d 45.2 24 0.00052 27.8 3.1 75 17-98 189-264 (266)
334 cd07832 STKc_CCRK Catalytic do 45.2 19 0.00041 28.6 2.5 79 16-98 180-285 (286)
335 PHA03207 serine/threonine kina 44.9 19 0.00041 30.7 2.6 81 16-100 266-380 (392)
336 cd05583 STKc_MSK_N N-terminal 44.7 30 0.00065 27.6 3.6 80 16-99 187-270 (288)
337 cd05592 STKc_nPKC_theta_delta 44.3 24 0.00052 29.0 3.1 77 16-99 175-252 (316)
338 cd07859 STKc_TDY_MAPK_plant Ca 44.3 19 0.00041 29.5 2.5 80 16-99 187-294 (338)
339 cd07839 STKc_CDK5 Catalytic do 44.0 43 0.00094 26.5 4.5 33 62-98 252-284 (284)
340 cd05579 STKc_MAST_like Catalyt 43.8 24 0.00053 27.4 2.9 75 17-99 181-261 (265)
341 cd06646 STKc_MAP4K5 Catalytic 43.6 49 0.0011 25.9 4.7 75 17-95 189-265 (267)
342 cd05609 STKc_MAST Catalytic do 43.6 30 0.00065 28.0 3.5 78 16-99 195-277 (305)
343 PTZ00024 cyclin-dependent prot 43.4 25 0.00054 28.9 3.1 82 16-101 213-319 (335)
344 PRK01844 hypothetical protein; 43.4 53 0.0012 21.3 3.8 33 150-182 36-68 (72)
345 cd07850 STKc_JNK Catalytic dom 43.3 38 0.00081 28.2 4.1 33 63-99 283-315 (353)
346 PF12174 RST: RCD1-SRO-TAF4 (R 43.0 26 0.00056 22.6 2.4 40 137-180 26-66 (70)
347 cd05123 STKc_AGC Catalytic dom 43.0 30 0.00064 26.7 3.3 75 16-98 172-250 (250)
348 KOG0690|consensus 42.8 25 0.00054 30.2 2.8 58 19-80 350-408 (516)
349 COG4103 Uncharacterized protei 42.7 37 0.00079 25.2 3.4 60 139-200 33-94 (148)
350 cd07854 STKc_MAPK4_6 Catalytic 42.7 34 0.00073 28.4 3.7 79 17-99 199-304 (342)
351 PTZ00266 NIMA-related protein 42.6 24 0.00052 34.6 3.0 78 16-99 222-299 (1021)
352 cd06613 STKc_MAP4K3_like Catal 42.4 22 0.00048 27.7 2.5 76 17-97 184-262 (262)
353 cd05615 STKc_cPKC_alpha Cataly 42.1 32 0.00069 28.3 3.5 78 16-98 180-260 (323)
354 PF12631 GTPase_Cys_C: Catalyt 41.8 39 0.00084 21.7 3.1 47 135-181 22-72 (73)
355 PF01023 S_100: S-100/ICaBP ty 41.8 60 0.0013 18.7 3.6 30 135-164 5-36 (44)
356 PLN02952 phosphoinositide phos 41.3 79 0.0017 29.2 6.0 50 149-199 13-64 (599)
357 cd07879 STKc_p38delta_MAPK13 C 41.1 34 0.00074 28.4 3.5 80 17-100 195-302 (342)
358 cd07855 STKc_ERK5 Catalytic do 40.7 40 0.00088 27.7 3.9 81 16-100 191-299 (334)
359 cd07834 STKc_MAPK Catalytic do 40.4 21 0.00046 29.2 2.2 80 17-100 187-294 (330)
360 cd07866 STKc_BUR1 Catalytic do 40.3 43 0.00093 26.9 3.9 79 16-98 206-311 (311)
361 cd05597 STKc_DMPK_like Catalyt 40.0 18 0.0004 29.9 1.7 80 17-99 188-270 (331)
362 cd05594 STKc_PKB_alpha Catalyt 39.9 13 0.00029 30.5 0.9 76 16-99 175-256 (325)
363 PF00069 Pkinase: Protein kina 39.7 10 0.00022 29.6 0.1 80 15-98 177-260 (260)
364 COG4807 Uncharacterized protei 39.6 1.5E+02 0.0033 21.7 8.0 39 135-182 90-128 (155)
365 KOG0612|consensus 39.6 34 0.00074 33.9 3.5 77 16-99 260-342 (1317)
366 PF02337 Gag_p10: Retroviral G 39.5 1.2E+02 0.0026 20.6 5.6 47 66-114 12-58 (90)
367 PF13623 SurA_N_2: SurA N-term 39.5 1.5E+02 0.0034 21.8 8.0 45 153-197 90-144 (145)
368 cd06640 STKc_MST4 Catalytic do 39.4 27 0.00057 27.8 2.5 78 16-100 180-258 (277)
369 KOG1954|consensus 39.3 46 0.001 29.0 3.9 54 139-195 447-500 (532)
370 PLN00138 large subunit ribosom 39.3 1.1E+02 0.0023 21.8 5.2 36 147-182 12-47 (113)
371 cd07838 STKc_CDK4_6_like Catal 38.8 24 0.00051 28.0 2.1 77 18-98 187-287 (287)
372 PF09336 Vps4_C: Vps4 C termin 38.7 41 0.0009 21.0 2.8 26 152-177 29-54 (62)
373 cd06642 STKc_STK25-YSK1 Cataly 38.7 35 0.00076 27.0 3.2 76 17-99 181-257 (277)
374 PF05099 TerB: Tellurite resis 38.3 17 0.00037 26.0 1.2 50 149-198 36-87 (140)
375 PF06648 DUF1160: Protein of u 38.3 1.5E+02 0.0032 21.4 5.8 48 131-181 32-80 (122)
376 cd07833 STKc_CDKL Catalytic do 37.7 46 0.00099 26.3 3.7 79 16-98 181-288 (288)
377 cd05575 STKc_SGK Catalytic dom 37.6 20 0.00043 29.5 1.6 79 17-99 176-255 (323)
378 cd05624 STKc_MRCK_beta Catalyt 37.1 18 0.00038 30.0 1.2 81 16-99 187-270 (331)
379 cd06634 STKc_TAO2 Catalytic do 36.5 36 0.00078 27.7 2.9 80 17-101 194-273 (308)
380 cd08229 STKc_Nek7 Catalytic do 36.1 47 0.001 26.0 3.5 63 17-79 186-249 (267)
381 cd06641 STKc_MST3 Catalytic do 36.0 41 0.00088 26.7 3.1 77 17-100 181-258 (277)
382 cd08223 STKc_Nek4 Catalytic do 35.9 42 0.0009 26.1 3.1 76 17-98 182-257 (257)
383 KOG0998|consensus 35.8 19 0.00041 34.6 1.2 62 136-199 11-72 (847)
384 cd07840 STKc_CDK9_like Catalyt 35.6 37 0.0008 26.8 2.8 76 16-98 181-287 (287)
385 PRK14981 DNA-directed RNA poly 35.4 71 0.0015 22.5 3.9 28 154-181 80-107 (112)
386 PF03979 Sigma70_r1_1: Sigma-7 35.1 40 0.00086 22.2 2.4 32 149-182 18-49 (82)
387 PF09068 EF-hand_2: EF hand; 34.7 57 0.0012 23.5 3.4 28 138-165 99-126 (127)
388 cd05610 STKc_MASTL Catalytic d 34.4 32 0.00069 32.0 2.5 77 16-98 559-637 (669)
389 cd08226 PK_STRAD_beta Pseudoki 34.0 26 0.00056 28.8 1.7 33 63-99 280-312 (328)
390 cd07836 STKc_Pho85 Catalytic d 33.8 28 0.00061 27.6 1.9 24 17-40 181-204 (284)
391 cd06620 PKc_MAPKK_Byr1_like Ca 33.8 52 0.0011 26.2 3.4 79 17-99 182-270 (284)
392 PF08414 NADPH_Ox: Respiratory 33.0 1.7E+02 0.0036 20.3 5.2 60 134-198 28-90 (100)
393 cd05582 STKc_RSK_N N-terminal 32.8 15 0.00032 30.1 0.1 77 16-99 177-258 (318)
394 PHA02105 hypothetical protein 32.5 89 0.0019 19.3 3.4 47 152-198 4-55 (68)
395 TIGR00624 tag DNA-3-methyladen 32.3 60 0.0013 25.0 3.3 45 135-179 52-96 (179)
396 PRK10353 3-methyl-adenine DNA 32.3 43 0.00092 26.0 2.5 45 135-179 53-97 (187)
397 PRK06402 rpl12p 50S ribosomal 32.0 1.8E+02 0.0039 20.4 5.8 31 152-182 16-46 (106)
398 cd08221 STKc_Nek9 Catalytic do 31.0 49 0.0011 25.7 2.8 74 17-96 181-254 (256)
399 cd07870 STKc_PFTAIRE2 Catalyti 31.0 75 0.0016 25.3 3.9 24 17-40 184-207 (291)
400 KOG4004|consensus 30.9 29 0.00062 27.3 1.3 29 134-162 220-248 (259)
401 COG1460 Uncharacterized protei 30.7 84 0.0018 22.3 3.5 29 154-182 81-109 (114)
402 COG3077 RelB DNA-damage-induci 30.4 1.7E+02 0.0037 19.8 4.8 37 66-112 17-53 (88)
403 PTZ00267 NIMA-related protein 30.1 42 0.00091 29.6 2.5 76 17-98 251-326 (478)
404 cd06607 STKc_TAO Catalytic dom 29.5 58 0.0013 26.3 3.0 79 17-101 194-273 (307)
405 PF14164 YqzH: YqzH-like prote 29.2 1.5E+02 0.0034 18.7 4.2 45 135-179 7-55 (64)
406 cd07857 STKc_MPK1 Catalytic do 29.1 35 0.00076 28.1 1.7 80 17-100 190-297 (332)
407 PTZ00283 serine/threonine prot 28.8 48 0.001 29.5 2.6 77 16-98 224-300 (496)
408 PHA03212 serine/threonine kina 28.6 36 0.00078 29.2 1.7 34 63-100 348-381 (391)
409 TIGR00135 gatC glutamyl-tRNA(G 28.2 1E+02 0.0022 20.7 3.6 28 153-180 1-28 (93)
410 cd05602 STKc_SGK1 Catalytic do 28.2 32 0.00069 28.3 1.3 79 16-98 175-254 (325)
411 COG2058 RPP1A Ribosomal protei 28.2 2.2E+02 0.0047 20.1 5.2 40 152-196 16-55 (109)
412 PF11848 DUF3368: Domain of un 27.8 1.3E+02 0.0028 17.5 3.5 32 150-181 15-47 (48)
413 cd07880 STKc_p38gamma_MAPK12 C 27.7 70 0.0015 26.5 3.3 80 17-100 196-303 (343)
414 PF14531 Kinase-like: Kinase-l 27.3 1.4E+02 0.0029 24.9 4.8 56 17-79 230-285 (288)
415 PF03352 Adenine_glyco: Methyl 26.4 57 0.0012 25.1 2.3 46 135-180 48-93 (179)
416 cd05060 PTKc_Syk_like Catalyti 26.3 80 0.0017 24.5 3.3 60 17-79 178-239 (257)
417 PRK10788 periplasmic folding c 26.1 4.4E+02 0.0095 24.2 8.4 46 63-114 96-141 (623)
418 cd06635 STKc_TAO1 Catalytic do 25.9 86 0.0019 25.5 3.5 80 16-100 203-282 (317)
419 PRK00034 gatC aspartyl/glutamy 25.8 1.2E+02 0.0026 20.3 3.6 29 153-181 3-31 (95)
420 cd06652 STKc_MEKK2 Catalytic d 25.7 78 0.0017 24.8 3.1 76 16-98 188-264 (265)
421 smart00750 KIND kinase non-cat 25.0 29 0.00063 25.4 0.5 25 16-40 83-107 (176)
422 KOG4347|consensus 25.0 77 0.0017 29.4 3.1 56 84-158 557-612 (671)
423 PF06384 ICAT: Beta-catenin-in 24.9 94 0.002 20.5 2.7 23 156-178 20-42 (78)
424 cd05831 Ribosomal_P1 Ribosomal 24.8 1.9E+02 0.0042 20.0 4.5 41 151-196 16-56 (103)
425 PF12419 DUF3670: SNF2 Helicas 24.6 1.7E+02 0.0036 21.3 4.4 50 149-198 80-139 (141)
426 TIGR01309 L30P_arch 50S riboso 24.6 2.1E+02 0.0045 21.4 4.9 10 68-77 16-25 (152)
427 PF10437 Lip_prot_lig_C: Bacte 24.5 2E+02 0.0044 18.7 4.5 42 155-198 44-86 (86)
428 cd05112 PTKc_Itk Catalytic dom 24.2 83 0.0018 24.4 3.0 61 17-79 181-242 (256)
429 PF09187 DUF1950: Domain of un 23.9 37 0.00081 23.8 0.8 18 5-23 6-23 (119)
430 cd05604 STKc_SGK3 Catalytic do 23.6 25 0.00055 28.9 -0.1 79 17-99 176-255 (325)
431 cd08530 STKc_CNK2-like Catalyt 23.3 81 0.0018 24.3 2.8 74 17-96 181-254 (256)
432 cd05085 PTKc_Fer Catalytic dom 23.0 81 0.0018 24.3 2.7 61 17-79 174-235 (250)
433 PF09107 SelB-wing_3: Elongati 22.8 1.6E+02 0.0034 17.5 3.3 31 149-184 7-37 (50)
434 cd05049 PTKc_Trk Catalytic dom 22.5 87 0.0019 24.6 2.8 62 16-79 203-265 (280)
435 cd05603 STKc_SGK2 Catalytic do 22.4 57 0.0012 26.7 1.8 77 17-98 176-254 (321)
436 TIGR02675 tape_meas_nterm tape 22.3 1.1E+02 0.0024 19.7 2.8 16 149-164 27-42 (75)
437 PF09373 PMBR: Pseudomurein-bi 22.2 75 0.0016 17.0 1.6 13 186-198 2-14 (33)
438 KOG3866|consensus 22.0 3.6E+02 0.0077 23.0 6.2 25 140-164 300-324 (442)
439 PF02885 Glycos_trans_3N: Glyc 21.4 2.1E+02 0.0046 17.6 4.0 27 152-178 14-41 (66)
440 PRK06049 rpl30p 50S ribosomal 21.2 2.6E+02 0.0056 20.9 4.9 10 68-77 18-27 (154)
441 cd07852 STKc_MAPK15 Catalytic 21.1 1.1E+02 0.0025 25.0 3.3 79 17-99 193-299 (337)
442 KOG0198|consensus 21.0 39 0.00084 28.4 0.5 80 16-100 201-281 (313)
443 PF09862 DUF2089: Protein of u 20.9 3.2E+02 0.0068 19.4 6.8 33 61-96 32-64 (113)
444 PF12486 DUF3702: ImpA domain 20.9 1.3E+02 0.0029 22.3 3.3 31 135-165 68-98 (148)
445 PF01316 Arg_repressor: Argini 20.7 2.1E+02 0.0046 18.3 3.8 31 152-182 19-49 (70)
446 cd05041 PTKc_Fes_like Catalyti 20.4 1.2E+02 0.0026 23.3 3.2 62 16-79 174-236 (251)
447 PF08976 DUF1880: Domain of un 20.4 66 0.0014 23.0 1.4 29 79-114 4-32 (118)
448 KOG0201|consensus 20.3 1.6E+02 0.0036 26.1 4.1 72 18-99 192-267 (467)
449 cd05070 PTKc_Fyn_Yrk Catalytic 20.2 1E+02 0.0022 23.9 2.8 61 16-79 182-244 (260)
450 cd01657 Ribosomal_L7_archeal_e 20.2 2.8E+02 0.0061 20.8 4.9 14 187-200 94-107 (159)
451 PF07862 Nif11: Nitrogen fixat 20.1 1.5E+02 0.0032 17.1 2.8 21 154-174 28-48 (49)
452 PRK00441 argR arginine repress 20.0 1.6E+02 0.0034 21.8 3.5 40 149-188 15-58 (149)
453 PF07128 DUF1380: Protein of u 20.0 1.9E+02 0.0042 21.3 3.9 31 153-183 27-57 (139)
No 1
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.90 E-value=8.2e-23 Score=152.60 Aligned_cols=135 Identities=27% Similarity=0.444 Sum_probs=122.6
Q ss_pred cccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhh
Q psy10243 48 NRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTE 126 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~ 126 (201)
..+..|.+.+.+.++ |+..++..+++++|.++++.++..+++.+|. + .+.|+|.+|+.++ .
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~-------~~~idf~~Fl~~m----------s 82 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-G-------NETVDFPEFLTVM----------S 82 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-C-------CCccCHHHHHHHH----------H
Confidence 456678888888777 9999999999999999999999999999977 4 3889999999876 4
Q ss_pred hhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 127 YRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 127 ~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.........++++.||+.||+|++|+|+..+|+.+++.+|..+++++++.+++.++.+++|.|+|++|+..+..
T Consensus 83 ~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 83 VKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred HHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 45556677999999999999999999999999999999999999999999999999999999999999998764
No 2
>KOG0027|consensus
Probab=99.88 E-value=6.8e-22 Score=148.53 Aligned_cols=138 Identities=36% Similarity=0.471 Sum_probs=120.3
Q ss_pred cccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhh
Q psy10243 48 NRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTE 126 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~ 126 (201)
..+.+|+..+.+.++ |+.+++..+++.||.+|++++++.+++++|.++ +|.|+|.+|..++.....
T Consensus 9 el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg-------~g~I~~~eF~~l~~~~~~------ 75 (151)
T KOG0027|consen 9 ELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDG-------DGTIDFEEFLDLMEKLGE------ 75 (151)
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCC-------CCeEcHHHHHHHHHhhhc------
Confidence 356677777777777 999999999999999999999999999999998 599999999987632111
Q ss_pred hhcCCc--ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 127 YRVKDV--ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 127 ~~~~~~--~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.... ...+.+++||+.||+|++|+||..||+.+|..+|.+.+.++++.+++.+|.|++|.|+|++|+.++..
T Consensus 76 --~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 76 --EKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred --ccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 1111 24669999999999999999999999999999999999999999999999999999999999998864
No 3
>KOG0028|consensus
Probab=99.80 E-value=1.4e-18 Score=127.79 Aligned_cols=137 Identities=25% Similarity=0.372 Sum_probs=121.7
Q ss_pred ccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhh
Q psy10243 47 CNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNT 125 (201)
Q Consensus 47 ~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~ 125 (201)
.+++..|++.+.+..+ |+.+++...++++|+.+..+++..++.++|.++. |.|+|++|...+
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~-------g~i~fe~f~~~m---------- 95 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGS-------GKITFEDFRRVM---------- 95 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccC-------ceechHHHHHHH----------
Confidence 3455667777766655 9999999999999999999999999999998884 889999999775
Q ss_pred hhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 126 EYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 126 ~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
..+.....+.++++.+|+.+|.+++|.||..+|+.+.+.+|.+++++++.+++.++|.+++|.|+-+||..++.+
T Consensus 96 t~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 96 TVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 333444468999999999999999999999999999999999999999999999999999999999999998864
No 4
>KOG0031|consensus
Probab=99.79 E-value=2e-18 Score=126.08 Aligned_cols=133 Identities=24% Similarity=0.401 Sum_probs=123.7
Q ss_pred cccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhh
Q psy10243 48 NRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTE 126 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~ 126 (201)
+.+..|.+.+.+.++ |..++++..+.+||..++++++..+++++ .|.|+|.-|+.+. .
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea-----------~gPINft~FLTmf----------G 91 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA-----------PGPINFTVFLTMF----------G 91 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC-----------CCCeeHHHHHHHH----------H
Confidence 457789999999999 99999999999999999999999999998 4789999999776 5
Q ss_pred hhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhcC
Q psy10243 127 YRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201 (201)
Q Consensus 127 ~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~~ 201 (201)
.++...++++.+..||+.||.+++|.|..+.|+++|...|..+++++|+.+++.+-.+..|.++|..|+..+.+|
T Consensus 92 ekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG 166 (171)
T KOG0031|consen 92 EKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHG 166 (171)
T ss_pred HHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHcc
Confidence 567777889999999999999999999999999999999999999999999999999999999999999999876
No 5
>KOG0030|consensus
Probab=99.75 E-value=1e-17 Score=120.43 Aligned_cols=142 Identities=33% Similarity=0.414 Sum_probs=120.7
Q ss_pred cccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhh
Q psy10243 46 DCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYN 124 (201)
Q Consensus 46 ~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~ 124 (201)
..+.+.+|.+++...++ |+......++++||.+||+.++.....+.+.+.-. -..++|++|+.+ +.
T Consensus 10 ~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~-----~~rl~FE~fLpm--------~q 76 (152)
T KOG0030|consen 10 MEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMN-----VKRLDFEEFLPM--------YQ 76 (152)
T ss_pred HHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhh-----hhhhhHHHHHHH--------HH
Confidence 35678889999888777 99999999999999999999998888877544211 145777777744 44
Q ss_pred hhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhcC
Q psy10243 125 TEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201 (201)
Q Consensus 125 ~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~~ 201 (201)
...+.+.+...+...+.++.||++++|.|...||+.+|..+|..++++|++.++.-.. |++|.|+|++|++.+.+|
T Consensus 77 ~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~~g 152 (152)
T KOG0030|consen 77 QVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIMSG 152 (152)
T ss_pred HHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHhcC
Confidence 5566677788999999999999999999999999999999999999999999998876 789999999999988765
No 6
>PTZ00183 centrin; Provisional
Probab=99.73 E-value=1.5e-16 Score=119.46 Aligned_cols=134 Identities=29% Similarity=0.444 Sum_probs=114.0
Q ss_pred cceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhh
Q psy10243 50 RVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYR 128 (201)
Q Consensus 50 ~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~ 128 (201)
...|...+.+.++ |+.+++..+++.+|..++...+..++..+|.++ +|.|+|.+|...... .
T Consensus 20 ~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~-------~g~i~~~eF~~~~~~----------~ 82 (158)
T PTZ00183 20 REAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDG-------SGKIDFEEFLDIMTK----------K 82 (158)
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC-------CCcEeHHHHHHHHHH----------H
Confidence 3446666655555 999999999999998888888999999998877 589999999976421 1
Q ss_pred cCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 129 VKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 129 ~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.........++.+|+.+|++++|+|+.+|+..++..+|..++++++..++..+|.+++|.|+|++|..++.+
T Consensus 83 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 83 LGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred hcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 112244678999999999999999999999999999999999999999999999999999999999998864
No 7
>PTZ00184 calmodulin; Provisional
Probab=99.72 E-value=2.3e-16 Score=116.98 Aligned_cols=134 Identities=42% Similarity=0.613 Sum_probs=113.6
Q ss_pred cceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhh
Q psy10243 50 RVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYR 128 (201)
Q Consensus 50 ~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~ 128 (201)
+..|...+.+.++ |+.+++..++..++.+++++.++.++..+|.++ +|.|+|.+|...+.. .
T Consensus 14 ~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~g~i~~~ef~~~l~~----------~ 76 (149)
T PTZ00184 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG-------NGTIDFPEFLTLMAR----------K 76 (149)
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCC-------CCcCcHHHHHHHHHH----------h
Confidence 4456666666556 999999999999999888889999999998877 589999999976422 1
Q ss_pred cCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 129 VKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 129 ~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.........+..+|+.+|.+++|+|+.+|++.++..+|..++.++++.++..+|.+++|.|+|+||+.++..
T Consensus 77 ~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 77 MKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred ccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence 112234567899999999999999999999999999999999999999999999999999999999998763
No 8
>KOG0037|consensus
Probab=99.65 E-value=2.8e-15 Score=115.85 Aligned_cols=124 Identities=22% Similarity=0.290 Sum_probs=109.2
Q ss_pred eeecccCCc-CCCCHHHHHHHHHHhCC-CCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhc
Q psy10243 52 VQSLIASEW-YRCSPDTRRCLLMTLRQ-AQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRV 129 (201)
Q Consensus 52 ~f~~~~~~~-~~is~~~~~~il~~L~~-~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~ 129 (201)
.|...|.+. +.|+.+++...+..... ..+.+.+|.++..+|.++ .|+|+|.||..++
T Consensus 62 ~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~-------~G~i~f~EF~~Lw-------------- 120 (221)
T KOG0037|consen 62 WFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDN-------SGTIGFKEFKALW-------------- 120 (221)
T ss_pred HHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCC-------CCccCHHHHHHHH--------------
Confidence 444445544 44999999999986644 468889999999999998 4999999999887
Q ss_pred CCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.....++.+|+.+|+|++|.|+..||+.+|..+|..++++-.+.+++++|..++|+|.|++|++++.
T Consensus 121 ---~~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 121 ---KYINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCV 187 (221)
T ss_pred ---HHHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHH
Confidence 4478899999999999999999999999999999999999999999999977799999999999875
No 9
>KOG0036|consensus
Probab=99.50 E-value=1.4e-13 Score=115.07 Aligned_cols=136 Identities=18% Similarity=0.226 Sum_probs=118.6
Q ss_pred ccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCC-CChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHH
Q psy10243 41 SEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQA-QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSG 118 (201)
Q Consensus 41 ~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~-~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~ 118 (201)
..++.....+-+|++.|.++++ ++..++...+..|... +..+..+.+++.+|.++ +|.+||.+|.....
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~-------dg~vDy~eF~~Y~~-- 78 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANR-------DGRVDYSEFKRYLD-- 78 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCc-------CCcccHHHHHHHHH--
Confidence 3444455667789888887766 9999999999999765 66677999999999888 69999999997652
Q ss_pred HHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 119 CLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
..+.++.+.|+.+|.++||.|..+|+.+.++.+|.++++++++.+++.+|.++++.|+++||...+
T Consensus 79 --------------~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ 144 (463)
T KOG0036|consen 79 --------------NKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHL 144 (463)
T ss_pred --------------HhHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhh
Confidence 446789999999999999999999999999999999999999999999999999999999998765
Q ss_pred h
Q psy10243 199 L 199 (201)
Q Consensus 199 ~ 199 (201)
.
T Consensus 145 l 145 (463)
T KOG0036|consen 145 L 145 (463)
T ss_pred h
Confidence 4
No 10
>KOG0034|consensus
Probab=99.47 E-value=1.5e-12 Score=100.44 Aligned_cols=120 Identities=27% Similarity=0.359 Sum_probs=94.1
Q ss_pred cCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccccccccc-ccHHHHHHHHHHHHHhhhhhhhhcCCcccHHH
Q psy10243 60 WYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFS-LTFVNFVMITLSGCLKMYNTEYRVKDVESGEE 137 (201)
Q Consensus 60 ~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~-i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (201)
..+ ++.+++..+. .+..+| -...++..++.++. +. |+|.+|+... ..-.......++
T Consensus 47 ~~g~lt~eef~~i~-~~~~Np---~~~rI~~~f~~~~~-------~~~v~F~~Fv~~l----------s~f~~~~~~~~K 105 (187)
T KOG0034|consen 47 GDGYLTKEEFLSIP-ELALNP---LADRIIDRFDTDGN-------GDPVDFEEFVRLL----------SVFSPKASKREK 105 (187)
T ss_pred ccCccCHHHHHHHH-HHhcCc---HHHHHHHHHhccCC-------CCccCHHHHHHHH----------hhhcCCccHHHH
Confidence 444 9999999999 666666 67788888877774 44 9999999764 111222233469
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCC--HHH----HHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLT--EEE----VDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s--~~e----i~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
++-||+.+|.+++|+|+++|+.+++..+ |...+ ++. ++.++.++|.++||+|+|+||.+.+.+
T Consensus 106 l~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 106 LRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 9999999999999999999999999886 44444 443 466888899999999999999998764
No 11
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.44 E-value=3.3e-13 Score=92.16 Aligned_cols=65 Identities=18% Similarity=0.314 Sum_probs=61.5
Q ss_pred HHHHHHHhhhhCc-CCCcceeHHHHHHHHHH-hCCCCCH-HHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDK-DGDGIINVAELRHVMTN-LGEKLTE-EEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~-~~~G~Is~~el~~~l~~-lg~~~s~-~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...++.+|+.||+ +++|+|+..||+.++.. +|..+++ ++++++++.+|.|+||+|+|+||+.++.
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 6678999999999 99999999999999999 9988888 9999999999999999999999998875
No 12
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.43 E-value=5.9e-13 Score=85.81 Aligned_cols=62 Identities=42% Similarity=0.798 Sum_probs=54.9
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHH----HHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEE----VDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~e----i~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
+++++|+.+|+|++|+|+.+||+.++..++...++++ +..+++.+|.+++|.|+|+||++++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4789999999999999999999999999997765554 4555999999999999999999875
No 13
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=99.36 E-value=4.5e-12 Score=86.54 Aligned_cols=65 Identities=25% Similarity=0.510 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhC-cCCCc-ceeHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFD-KDGDG-IINVAELRHVMTN-----LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D-~~~~G-~Is~~el~~~l~~-----lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...++++|+.|| ++++| +|+.+||+.+|+. +|...++++++++++.+|.|++|+|+|++|+.++.
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 567899999998 89999 5999999999999 89889999999999999999999999999998875
No 14
>KOG0044|consensus
Probab=99.35 E-value=2.2e-11 Score=94.14 Aligned_cols=123 Identities=21% Similarity=0.286 Sum_probs=97.3
Q ss_pred cCCCCHHHHHHHHHHhCCCCCh-hHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHH
Q psy10243 60 WYRCSPDTRRCLLMTLRQAQMP-GHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEEL 138 (201)
Q Consensus 60 ~~~is~~~~~~il~~L~~~~s~-~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (201)
.+.+..++.+.+++.....-++ .-.+.+++.+|.++ +|.|+|.||+... + ........+.+
T Consensus 41 ~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~-------dg~i~F~Efi~al-s----------~~~rGt~eekl 102 (193)
T KOG0044|consen 41 SGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNK-------DGTIDFLEFICAL-S----------LTSRGTLEEKL 102 (193)
T ss_pred CCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccC-------CCCcCHHHHHHHH-H----------HHcCCcHHHHh
Confidence 4559999999999999864333 34788888898888 5999999998653 1 12233446778
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHh----CC-------CCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNL----GE-------KLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~l----g~-------~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
..+|+.+|.|++|+|+.+|+-.++..+ |. .-..+.++.+|+.+|.|+||.||++||...+..
T Consensus 103 ~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 103 KWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred hhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 888999999999999999999988764 32 124567899999999999999999999987653
No 15
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=99.25 E-value=3.5e-11 Score=83.18 Aligned_cols=66 Identities=26% Similarity=0.446 Sum_probs=59.6
Q ss_pred HHHHHHHhhhhCc-CC-CcceeHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 135 GEELLEAFRVFDK-DG-DGIINVAELRHVMTN-----LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 135 ~~~l~~~F~~~D~-~~-~G~Is~~el~~~l~~-----lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
...++.+|+.||. ++ +|+|+.+|++.++.. +|..+++++++.+++.+|.+++|.|+|++|+.++.+
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 5678999999997 87 799999999999986 567889999999999999999999999999988753
No 16
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=99.24 E-value=4.4e-11 Score=82.30 Aligned_cols=65 Identities=25% Similarity=0.536 Sum_probs=58.2
Q ss_pred HHHHHHHhhhhC-cCCCcc-eeHHHHHHHHHH-hCC----CCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFD-KDGDGI-INVAELRHVMTN-LGE----KLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D-~~~~G~-Is~~el~~~l~~-lg~----~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+.++++|+.|| ++++|+ |+.+|++.+++. +|. .+++++++.+++.+|.+++|.|+|++|+.++.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~ 79 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 567999999997 999994 999999999985 553 46889999999999999999999999998775
No 17
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=99.22 E-value=6.5e-11 Score=80.79 Aligned_cols=65 Identities=17% Similarity=0.407 Sum_probs=59.3
Q ss_pred HHHHHHHhhhhCc-CC-CcceeHHHHHHHHHH---hCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDK-DG-DGIINVAELRHVMTN---LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~-~~-~G~Is~~el~~~l~~---lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...+..+|..||. ++ +|+|+.+||+.++.. +|.++++++++++++.+|.+++|+|+|+||+.++.
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHH
Confidence 5677889999998 67 899999999999973 69999999999999999999999999999998875
No 18
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=99.22 E-value=6.5e-11 Score=81.68 Aligned_cols=65 Identities=20% Similarity=0.395 Sum_probs=57.0
Q ss_pred HHHHHHHhhhhC-cCCCc-ceeHHHHHHHHHH-h----CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFD-KDGDG-IINVAELRHVMTN-L----GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D-~~~~G-~Is~~el~~~l~~-l----g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...++++|+.|| +|++| +|+..||+.++.. + +...++.+++++++.+|.|++|.|+|+||+.++.
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 567889999999 78998 5999999999977 3 3345788999999999999999999999999875
No 19
>KOG0027|consensus
Probab=99.19 E-value=7.4e-11 Score=88.48 Aligned_cols=68 Identities=47% Similarity=0.724 Sum_probs=64.3
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.....++.+|+.||++++|+|+..||..+++.+|..++++++..+++.+|.+++|.|++++|+.++.+
T Consensus 5 ~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~ 72 (151)
T KOG0027|consen 5 EQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEK 72 (151)
T ss_pred HHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 44678999999999999999999999999999999999999999999999999999999999998864
No 20
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=99.19 E-value=1e-10 Score=81.12 Aligned_cols=65 Identities=23% Similarity=0.400 Sum_probs=60.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+...++.+|+.+|++++|.|+.+|++.+++..| +++++++.+++.+|.+++|.|+|+||+.++.
T Consensus 7 ~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 7 EDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 4577899999999999999999999999999976 7899999999999999999999999998764
No 21
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=99.17 E-value=1.3e-10 Score=74.71 Aligned_cols=59 Identities=31% Similarity=0.472 Sum_probs=54.8
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+.+|+.+|++++|.|+.+|++.++..+| +++++++.+++.+|.+++|.|+|++|+.++.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 5789999999999999999999999987 4889999999999999999999999998764
No 22
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=99.14 E-value=1.4e-10 Score=79.02 Aligned_cols=68 Identities=18% Similarity=0.387 Sum_probs=59.8
Q ss_pred ccHHHHHHHhhhhCc--CCCcceeHHHHHHHHHH-hCCCC----CHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDK--DGDGIINVAELRHVMTN-LGEKL----TEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~--~~~G~Is~~el~~~l~~-lg~~~----s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.....++.+|+.+|+ +++|+|+.+|++.+++. +|..+ ++++++.+++.+|.+++|.|+|++|+.++..
T Consensus 5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 346778999999999 89999999999999986 56444 5899999999999999999999999998753
No 23
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=99.13 E-value=2.1e-10 Score=70.91 Aligned_cols=52 Identities=42% Similarity=0.760 Sum_probs=49.0
Q ss_pred CCcceeHHHHHHHHHHhCCC-CCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 149 GDGIINVAELRHVMTNLGEK-LTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg~~-~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
++|.|+.++|+.++..+|.. ++++++..++..+|.+++|.|+|+||+.++.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999888999 99999999999999999999999999998863
No 24
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=99.06 E-value=1e-09 Score=75.02 Aligned_cols=66 Identities=21% Similarity=0.350 Sum_probs=58.0
Q ss_pred cHHHHHHHhhh-hCcCCCc-ceeHHHHHHHHHHh-----CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 134 SGEELLEAFRV-FDKDGDG-IINVAELRHVMTNL-----GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 134 ~~~~l~~~F~~-~D~~~~G-~Is~~el~~~l~~l-----g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
....+..+|+. +|++++| +|+.+||+.++..- +...++.+++++++.+|.|+||.|+|+||+.++.
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 36678999998 7888876 99999999999875 3456789999999999999999999999998875
No 25
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.05 E-value=7.2e-10 Score=83.12 Aligned_cols=67 Identities=34% Similarity=0.607 Sum_probs=63.2
Q ss_pred cccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 132 VESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 132 ~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
..+.++++++|..+|++++|.|+.+||..+++.+|..+++.++..+++.++. +++.|+|.+|+.+|.
T Consensus 16 ~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms 82 (160)
T COG5126 16 EEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMS 82 (160)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999998 899999999998875
No 26
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=99.05 E-value=1.2e-09 Score=68.06 Aligned_cols=61 Identities=52% Similarity=0.913 Sum_probs=57.9
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
+..+|..+|.+++|.|+.+|+..++..++.+.+.+.+..++..++.+++|.|++++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999999875
No 27
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.98 E-value=6.8e-09 Score=74.28 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=55.8
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.....+..+|..+|.|++|+|+.+||..+. + ...+..+..++..+|.|+||.||++||..++.+
T Consensus 45 ~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l--~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 45 MCKDPVGWMFNQLDGNYDGKLSHHELAPIR--L--DPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--c--cchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 446778999999999999999999999876 2 245778899999999999999999999998853
No 28
>KOG0044|consensus
Probab=98.95 E-value=1.7e-08 Score=78.13 Aligned_cols=121 Identities=21% Similarity=0.254 Sum_probs=97.4
Q ss_pred CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHH
Q psy10243 61 YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLE 140 (201)
Q Consensus 61 ~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 140 (201)
.+++++.+..+...-.. ++.+++...+-+-.+.| .|.++-.+|..+.-. -............
T Consensus 7 ~~~~~~~~e~l~~~t~f--~~~ei~~~Yr~Fk~~cP------~G~~~~~~F~~i~~~----------~fp~gd~~~y~~~ 68 (193)
T KOG0044|consen 7 SKLQPESLEQLVQQTKF--SKKEIQQWYRGFKNECP------SGRLTLEEFREIYAS----------FFPDGDASKYAEL 68 (193)
T ss_pred ccCCcHHHHHHHHhcCC--CHHHHHHHHHHhcccCC------CCccCHHHHHHHHHH----------HCCCCCHHHHHHH
Confidence 44677777777665555 67788888888855555 688999998866422 2224466778899
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+|+.||.|++|.|+..|+..++..+...-.++-++..|+.+|.|++|.|+++|+++++.
T Consensus 69 vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~ 127 (193)
T KOG0044|consen 69 VFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQ 127 (193)
T ss_pred HHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHH
Confidence 99999999999999999999998887777788899999999999999999999998875
No 29
>PF14658 EF-hand_9: EF-hand domain
Probab=98.92 E-value=5.2e-09 Score=66.68 Aligned_cols=61 Identities=26% Similarity=0.490 Sum_probs=57.3
Q ss_pred HHhhhhCcCCCcceeHHHHHHHHHHhCC-CCCHHHHHHHHHhhCCCCC-CcccHHHHHHHHhc
Q psy10243 140 EAFRVFDKDGDGIINVAELRHVMTNLGE-KLTEEEVDAMIAVADQEGL-GYIRYEDFVQVMLR 200 (201)
Q Consensus 140 ~~F~~~D~~~~G~Is~~el~~~l~~lg~-~~s~~ei~~i~~~~d~~~~-g~I~~~eF~~~l~~ 200 (201)
.+|..||+++.|.|...++..+|+.+|. .+++.+++.+.+++|+++. |.|+++.|+..|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999999987 8999999999999999988 99999999998864
No 30
>KOG0038|consensus
Probab=98.90 E-value=2e-08 Score=73.41 Aligned_cols=101 Identities=31% Similarity=0.490 Sum_probs=78.9
Q ss_pred HHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 83 HLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 83 ~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
-.+.+++.+..++ +|.++|+.|+.+. +-+.. ..+..-+..-||+.+|-|++++|...+|...+
T Consensus 72 fk~ri~e~FSeDG-------~GnlsfddFlDmf-SV~sE---------~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l 134 (189)
T KOG0038|consen 72 FKRRICEVFSEDG-------RGNLSFDDFLDMF-SVFSE---------MAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTL 134 (189)
T ss_pred HHHHHHHHhccCC-------CCcccHHHHHHHH-HHHHh---------hChHHhhhhheeEEeecCCCCcccHHHHHHHH
Confidence 4567777776666 6999999999543 21111 11224466789999999999999999999999
Q ss_pred HHhC-CCCCHHHH----HHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 163 TNLG-EKLTEEEV----DAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 163 ~~lg-~~~s~~ei----~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.++. ..++++++ ++++.++|.||||++++.||.+++.+
T Consensus 135 ~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 135 TSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred HHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 9885 56888886 55778899999999999999998765
No 31
>PTZ00183 centrin; Provisional
Probab=98.87 E-value=1.1e-08 Score=76.48 Aligned_cols=67 Identities=40% Similarity=0.711 Sum_probs=58.0
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.....+..+|..+|.+++|.|+..|+..++..+|..++..++..++..+|.+++|.|+|++|+..+.
T Consensus 14 ~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 14 DQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4567788889999999999999999999999888888888899999999999999999999987654
No 32
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.84 E-value=1e-08 Score=69.90 Aligned_cols=65 Identities=15% Similarity=0.373 Sum_probs=57.1
Q ss_pred HHHHHHHhhhhCcC--CCcceeHHHHHHHHH-HhCCCCC----HHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKD--GDGIINVAELRHVMT-NLGEKLT----EEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~~--~~G~Is~~el~~~l~-~lg~~~s----~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...+...|+.++.. ++|+|+.+||+.++. .+|..++ +++++.+++.+|.+++|+|+|++|+.++.
T Consensus 7 i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 7 IETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 56778899999866 489999999999997 5666666 99999999999999999999999999875
No 33
>PLN02964 phosphatidylserine decarboxylase
Probab=98.84 E-value=1.9e-08 Score=90.62 Aligned_cols=109 Identities=19% Similarity=0.305 Sum_probs=83.7
Q ss_pred cccceeecccCCcCC-CCHHHHHHHHHHhC-CCCChhH---HHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhh
Q psy10243 48 NRRVVQSLIASEWYR-CSPDTRRCLLMTLR-QAQMPGH---LRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKM 122 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~-is~~~~~~il~~L~-~~~s~~~---~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~ 122 (201)
+.+..|+..|.+.++ + +..+++.+| ..|++++ ++.+++.+|.++ +|.|+|.||+.++-.
T Consensus 144 elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~Dg-------dG~IdfdEFl~lL~~----- 207 (644)
T PLN02964 144 SACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDE-------DGQLSFSEFSDLIKA----- 207 (644)
T ss_pred HHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCC-------CCeEcHHHHHHHHHH-----
Confidence 455568888887766 4 888899999 5888876 788889888887 588999999876521
Q ss_pred hhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHH-------------hCCCCCH-HHHHHHH
Q psy10243 123 YNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN-------------LGEKLTE-EEVDAMI 178 (201)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~-------------lg~~~s~-~ei~~i~ 178 (201)
.......++++.+|+.+|+|++|+|+.+||+.++.. .|..++. ++++.++
T Consensus 208 ------lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~ii 271 (644)
T PLN02964 208 ------FGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMI 271 (644)
T ss_pred ------hccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHH
Confidence 222355778999999999999999999999999888 5656655 5566655
No 34
>PTZ00184 calmodulin; Provisional
Probab=98.84 E-value=1.4e-08 Score=74.85 Aligned_cols=67 Identities=45% Similarity=0.709 Sum_probs=59.0
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.....++..|..+|.+++|.|+.+|+..++..+|..++.+++..+++.+|.+++|.|+|++|+.++.
T Consensus 8 ~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 74 (149)
T PTZ00184 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMA 74 (149)
T ss_pred HHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHH
Confidence 4466788899999999999999999999998888888888999999999999999999999998764
No 35
>KOG0028|consensus
Probab=98.80 E-value=1.7e-08 Score=74.82 Aligned_cols=67 Identities=43% Similarity=0.643 Sum_probs=63.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+...++.+|..||.+++|+|+.+||+.+++.+|+.+..+++.+++..+|.++.|.|+|++|+..+.
T Consensus 30 ~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt 96 (172)
T KOG0028|consen 30 EQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMT 96 (172)
T ss_pred HHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHH
Confidence 4457899999999999999999999999999999999999999999999999999999999998764
No 36
>PLN02964 phosphatidylserine decarboxylase
Probab=98.70 E-value=1.6e-07 Score=84.68 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=87.0
Q ss_pred cCCCCHHHHHHHHHH--hCCC-CChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHH
Q psy10243 60 WYRCSPDTRRCLLMT--LRQA-QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGE 136 (201)
Q Consensus 60 ~~~is~~~~~~il~~--L~~~-~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (201)
|+++|++++...-.. .... ...++++..+..+|.+++ |.+ +....... . ..........
T Consensus 118 ~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgd-------G~i-Lg~ilrsl--------G--~~~pte~e~~ 179 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSS-------NKV-VGSIFVSC--------S--IEDPVETERS 179 (644)
T ss_pred cCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCC-------CcC-HHHHHHHh--------C--CCCCCHHHHH
Confidence 577888877755443 1221 112456777777887774 554 22211110 0 0011112223
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.+..+|+.+|.+++|.|+.+||..++..++...+++++.++|+.+|.|++|.|+++||..++..
T Consensus 180 fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 180 FARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 4899999999999999999999999999998889999999999999999999999999998764
No 37
>KOG0041|consensus
Probab=98.58 E-value=2.5e-07 Score=71.04 Aligned_cols=65 Identities=26% Similarity=0.491 Sum_probs=59.9
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.......|+.+|.+.||+|+..||+..+.++|.+-+.=-++.+++++|.|.+|+|+|-||+-++.
T Consensus 98 Ik~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfr 162 (244)
T KOG0041|consen 98 IKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHH
Confidence 56778899999999999999999999999999888888899999999999999999999987654
No 38
>KOG0030|consensus
Probab=98.57 E-value=1.7e-07 Score=67.91 Aligned_cols=69 Identities=28% Similarity=0.500 Sum_probs=62.3
Q ss_pred CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCC--CCCcccHHHHHHHHh
Q psy10243 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE--GLGYIRYEDFVQVML 199 (201)
Q Consensus 131 ~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~--~~g~I~~~eF~~~l~ 199 (201)
..++..+++++|..||+.+||+|+......+|+.+|.++++.++.+.+...+.+ +-.+|+|++|+-++.
T Consensus 6 ~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q 76 (152)
T KOG0030|consen 6 TPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQ 76 (152)
T ss_pred CcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHH
Confidence 446678999999999999999999999999999999999999999999998866 446899999998775
No 39
>KOG0031|consensus
Probab=98.57 E-value=2.2e-07 Score=68.52 Aligned_cols=62 Identities=34% Similarity=0.619 Sum_probs=53.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+.+++++||..+|+|+||.|..++|+..+.++|..+++++++.++++. .|.|+|.-|+.++
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmf 90 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMF 90 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHH
Confidence 5588999999999999999999999999999999999999999988765 3456666666543
No 40
>KOG4223|consensus
Probab=98.49 E-value=4.1e-07 Score=74.58 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=92.8
Q ss_pred eecccCCcCC-CCHHHHHHHHHHhCCC-CChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcC
Q psy10243 53 QSLIASEWYR-CSPDTRRCLLMTLRQA-QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVK 130 (201)
Q Consensus 53 f~~~~~~~~~-is~~~~~~il~~L~~~-~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~ 130 (201)
|.-.+.++++ ++.+++-..+.==... ..+=-++..+...|.++ +|.|++.||+.-+.+.. ...
T Consensus 169 Fk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~-------DG~I~~eEfigd~~~~~--------~~~ 233 (325)
T KOG4223|consen 169 FKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNG-------DGKISLEEFIGDLYSHE--------GNE 233 (325)
T ss_pred HhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCC-------CCceeHHHHHhHHhhcc--------CCC
Confidence 5556666666 9999888776522211 11113778888888888 79999999996553311 100
Q ss_pred Cccc--HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 131 DVES--GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 131 ~~~~--~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
..+. ..+-.+.|...|+|++|+++.+|++.++.-.+......++.-++.+.|.|+||++|++|-+.
T Consensus 234 ~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 234 EEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred CCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 0011 12223567788999999999999999987777777889999999999999999999999764
No 41
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.46 E-value=2.7e-07 Score=49.47 Aligned_cols=28 Identities=57% Similarity=0.939 Sum_probs=21.4
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHHHHHh
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHVMTNL 165 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~l~~l 165 (201)
++.+|+.+|+|++|+|+.+||..+++++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 5677888888888888888888777653
No 42
>KOG0377|consensus
Probab=98.44 E-value=2.8e-06 Score=72.46 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=87.7
Q ss_pred eecccCC-cCCCCHHHHHHHHHHh-CCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH-HHHHHhhhhhhhhc
Q psy10243 53 QSLIASE-WYRCSPDTRRCLLMTL-RQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT-LSGCLKMYNTEYRV 129 (201)
Q Consensus 53 f~~~~~~-~~~is~~~~~~il~~L-~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~-~~~~~~~~~~~~~~ 129 (201)
|...|.+ .+.+|-.....++..+ |.++ -.+.+...+ .+. ..+|.+.|.+-.... .+..........-.
T Consensus 470 F~~~D~~ksG~lsis~Wa~~mE~i~~L~L---PWr~L~~kl-a~~-----s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 470 FRKYDPKKSGKLSISHWAKCMENITGLNL---PWRLLRPKL-ANG-----SDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred HHhcChhhcCeeeHHHHHHHHHHHhcCCC---cHHHhhhhc-cCC-----CcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 3333433 4558888887777654 5443 133333333 121 114566666554322 11111110000000
Q ss_pred CCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC----CCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG----EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg----~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
..-.....+..+|+.+|.|++|.||.+||+.+++-++ ..++++++.++-+.+|.|+||.|++.||++.+.
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFR 614 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHh
Confidence 0112355678899999999999999999999988764 568899999999999999999999999998763
No 43
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.42 E-value=1.9e-06 Score=58.74 Aligned_cols=64 Identities=19% Similarity=0.348 Sum_probs=54.0
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTN-----LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~-----lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...+..+|..+- .+.|.++..||+.++.. ++..-+++.++++|+..|.|+||.|+|.||+.++.
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 556778899887 55679999999999975 34455688999999999999999999999998764
No 44
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=98.36 E-value=6.4e-07 Score=48.75 Aligned_cols=30 Identities=57% Similarity=1.032 Sum_probs=26.2
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHH-HhC
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMT-NLG 166 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~-~lg 166 (201)
+++.+|+.+|+|++|+|+.+||+.+++ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 468899999999999999999999998 565
No 45
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=98.32 E-value=4.4e-06 Score=58.60 Aligned_cols=63 Identities=24% Similarity=0.418 Sum_probs=56.2
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+......+|+..|. ++|+|+.++.+.++...| ++.+.+..|+..+|.+++|.++++||+-+|
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm 69 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAM 69 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHH
Confidence 557788899999986 689999999999999877 788999999999999999999999998765
No 46
>KOG4223|consensus
Probab=98.27 E-value=4e-06 Score=68.85 Aligned_cols=139 Identities=15% Similarity=0.155 Sum_probs=87.1
Q ss_pred eeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhh-hhc
Q psy10243 52 VQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTE-YRV 129 (201)
Q Consensus 52 ~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~-~~~ 129 (201)
++...+.+.++ |+..++..-...--+.....+...-+...|.+. +|.|+|++++........ .... ...
T Consensus 82 l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~-------Dg~i~~eey~~~~~~~~~--~~~~~~d~ 152 (325)
T KOG4223|consen 82 LVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNK-------DGFITWEEYLPQTYGRVD--LPDEFPDE 152 (325)
T ss_pred HHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-------cceeeHHHhhhhhhhccc--Cccccccc
Confidence 44445566666 777766665544333222334444444555554 799999999966532100 0000 000
Q ss_pred CCc----ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 130 KDV----ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 130 ~~~----~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
... .....-++-|+.-|.|++|.+|++||...|.-- ...+.+-.+.+-+...|.|+||+|+++||+.-|.
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~ 227 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLY 227 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHh
Confidence 000 112344567999999999999999999887532 2334555678889999999999999999998664
No 47
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.24 E-value=1.5e-06 Score=46.60 Aligned_cols=28 Identities=29% Similarity=0.548 Sum_probs=25.7
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 173 EVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 173 ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
|++++|+.+|.|++|.|+++||+.++.+
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 5789999999999999999999998864
No 48
>KOG0604|consensus
Probab=98.20 E-value=8.9e-07 Score=72.64 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=65.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc-----cccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC-----NRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
.-++|++.+.++.|+|||+||....--.... .+..-+.|-..+|+.||.++++.+.+.|..+|+ -|..+.++
T Consensus 243 scdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pt---eRlTI~~~ 319 (400)
T KOG0604|consen 243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPT---ERLTIEEV 319 (400)
T ss_pred CCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCch---hheeHHHh
Confidence 3578999999999999999998655422211 122358899999999999999999999999884 48888999
Q ss_pred hccCcccccc
Q psy10243 92 RLDLGFMINV 101 (201)
Q Consensus 92 d~~~~~~~~~ 101 (201)
.+|+|+...
T Consensus 320 -m~hpwi~~~ 328 (400)
T KOG0604|consen 320 -MDHPWINQY 328 (400)
T ss_pred -hcCchhccc
Confidence 999999644
No 49
>KOG0036|consensus
Probab=98.11 E-value=1.1e-05 Score=68.34 Aligned_cols=67 Identities=18% Similarity=0.333 Sum_probs=60.7
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCC-CCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEK-LTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~-~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+...+++..|+.||.+++|.++..++.+.+..++.+ ...+-...+++.+|.|.+|+++|+||.+.+.
T Consensus 11 er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~ 78 (463)
T KOG0036|consen 11 ERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD 78 (463)
T ss_pred HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH
Confidence 446688999999999999999999999999999866 7778889999999999999999999999875
No 50
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=98.10 E-value=1.3e-05 Score=48.30 Aligned_cols=48 Identities=13% Similarity=0.281 Sum_probs=40.0
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+++..|++.+|+.++..++++.+..+|+.+|.+++|++.-+||+.++.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 368899999999999999999999999999999999999999998875
No 51
>KOG0037|consensus
Probab=98.10 E-value=1.5e-05 Score=62.26 Aligned_cols=86 Identities=17% Similarity=0.119 Sum_probs=70.2
Q ss_pred ceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhc
Q psy10243 51 VVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRV 129 (201)
Q Consensus 51 ~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~ 129 (201)
.+|.-+|.++.+ |+..|++.++..+|+.++++-...+++.+|..+ .|.|+|++|+..++.
T Consensus 128 ~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~-------~g~i~FD~FI~ccv~------------ 188 (221)
T KOG0037|consen 128 NVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFG-------GGRIDFDDFIQCCVV------------ 188 (221)
T ss_pred HHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhcccc-------CCceeHHHHHHHHHH------------
Confidence 355555555555 999999999999999999999999999998675 489999999988743
Q ss_pred CCcccHHHHHHHhhhhCcCCCccee--HHHHHH
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIIN--VAELRH 160 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is--~~el~~ 160 (201)
...+-++|+..|++..|.|+ .+++..
T Consensus 189 -----L~~lt~~Fr~~D~~q~G~i~~~y~dfl~ 216 (221)
T KOG0037|consen 189 -----LQRLTEAFRRRDTAQQGSITISYDDFLQ 216 (221)
T ss_pred -----HHHHHHHHHHhccccceeEEEeHHHHHH
Confidence 67788999999999999765 455543
No 52
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=98.04 E-value=6.7e-06 Score=58.64 Aligned_cols=63 Identities=19% Similarity=0.302 Sum_probs=47.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQV 197 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~ 197 (201)
.....+.--|..+|.|++|.|+..|++.+...+ ...+.-+..+++.+|.|+||+||..||..+
T Consensus 51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp GGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 456677888999999999999999999876644 234556888999999999999999999764
No 53
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.02 E-value=2.1e-05 Score=48.22 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHhCCC-CChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 61 YRCSPDTRRCLLMTLRQA-QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 61 ~~is~~~~~~il~~L~~~-~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+.|+.+++..+++.+|.. +++++++.++..+|.++ +|.|+|.||...+
T Consensus 3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~-------~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDG-------DGYISFDEFISMM 51 (54)
T ss_dssp SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSS-------SSSEEHHHHHHHH
T ss_pred CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCC-------CCCCCHHHHHHHH
Confidence 559999999999999999 99999999999999999 5999999999765
No 54
>KOG0033|consensus
Probab=98.02 E-value=5.2e-06 Score=66.57 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=66.8
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccc-cccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLD-DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.+.|+-++.++.++.||+||+.++.... ...+....++....|+.||++++..+-++|..+| ..|.++.++ ++||
T Consensus 193 vDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP---~kRIta~EA-L~Hp 268 (355)
T KOG0033|consen 193 VDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNP---KKRITADEA-LKHP 268 (355)
T ss_pred chhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccCh---hhhccHHHH-hCCc
Confidence 4678889999999999999998665432 3344557888888999999999999999999988 568888998 9999
Q ss_pred ccccc
Q psy10243 97 FMINV 101 (201)
Q Consensus 97 ~~~~~ 101 (201)
|+.+.
T Consensus 269 Wi~~r 273 (355)
T KOG0033|consen 269 WICNR 273 (355)
T ss_pred hhcch
Confidence 99654
No 55
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.02 E-value=2.1e-05 Score=50.10 Aligned_cols=65 Identities=26% Similarity=0.212 Sum_probs=48.5
Q ss_pred HHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 84 LRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 84 ~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
++.+++.+|.++ +|.|+..++..+...-.. ........+.+..+|+.+|+|++|.|+.+|+..++
T Consensus 2 l~~~F~~~D~d~-------~G~i~~~el~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDG-------DGYISKEELRRALKHLGR-------DMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTS-------SSEEEHHHHHHHHHHTTS-------HSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCc-------cCCCCHHHHHHHHHHhcc-------cccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 578899999999 599999999976532110 00122335577788999999999999999998764
No 56
>KOG0032|consensus
Probab=98.00 E-value=2.1e-05 Score=67.60 Aligned_cols=83 Identities=12% Similarity=0.006 Sum_probs=71.5
Q ss_pred CCcchhHHHHHHHHhHhcCCcceeeeccccccc-cccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 15 LPITQRVTILIEFIFINVGYLHLTLESEKLDDC-NRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
-+..+.|++++..+.|+||++||..+++..... ..+.-+++....|+.+|..+++++.+.|..+| ..|..+.++ +
T Consensus 216 ~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp---~~R~ta~~~-L 291 (382)
T KOG0032|consen 216 GDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDP---RKRLTAAQA-L 291 (382)
T ss_pred CcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCc---ccCCCHHHH-h
Confidence 467889999999999999999999988655532 33446789999999999999999999999988 779999999 9
Q ss_pred cCcccccc
Q psy10243 94 DLGFMINV 101 (201)
Q Consensus 94 ~~~~~~~~ 101 (201)
.|||+...
T Consensus 292 ~HpWi~~~ 299 (382)
T KOG0032|consen 292 QHPWIKSI 299 (382)
T ss_pred cCccccCC
Confidence 99999764
No 57
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.99 E-value=1.5e-05 Score=68.44 Aligned_cols=56 Identities=29% Similarity=0.318 Sum_probs=49.1
Q ss_pred CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 131 ~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.......++.+|+.+|.|++|+|+.+|+.. ++.+|..+|.|++|.|+++||...+.
T Consensus 329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred cChhhHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 335577889999999999999999999942 57899999999999999999998775
No 58
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.92 E-value=1.4e-05 Score=41.19 Aligned_cols=24 Identities=46% Similarity=0.844 Sum_probs=18.3
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHH
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHV 161 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~ 161 (201)
++.+|+.+|.|++|.|+.+|+.++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 356788888888888888888764
No 59
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.91 E-value=1.7e-05 Score=54.15 Aligned_cols=59 Identities=12% Similarity=-0.033 Sum_probs=49.1
Q ss_pred cceeecccC-C-cCCCCHHHHHHHHHH-hCCCCCh-hHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 50 RVVQSLIAS-E-WYRCSPDTRRCLLMT-LRQAQMP-GHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 50 ~~~f~~~~~-~-~~~is~~~~~~il~~-L~~~~s~-~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+.+|..++. + .+.|+..+++.+++. ||...+. ++++.++..+|.++ +|.|+|.||..++
T Consensus 11 ~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~-------DG~I~F~EF~~l~ 73 (89)
T cd05022 11 VSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQ-------DSKLSFEEFWELI 73 (89)
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCC-------CCCCcHHHHHHHH
Confidence 445666665 4 445999999999999 9877777 89999999999999 6999999998765
No 60
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.80 E-value=4.4e-05 Score=51.96 Aligned_cols=60 Identities=12% Similarity=-0.006 Sum_probs=49.7
Q ss_pred ccceeeccc-CC-cC-CCCHHHHHHHHHH-----hCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 49 RRVVQSLIA-SE-WY-RCSPDTRRCLLMT-----LRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 49 ~~~~f~~~~-~~-~~-~is~~~~~~il~~-----L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
.+.+|...+ .+ .+ .|+.++++.+++. +|..+++++++.+++.+|.++ +|.|+|.+|..+.
T Consensus 10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~-------dG~v~f~eF~~li 77 (88)
T cd05027 10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDG-------DGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCC-------CCcCcHHHHHHHH
Confidence 344566665 34 34 3999999999999 999899999999999999998 6999999998665
No 61
>KOG0046|consensus
Probab=97.73 E-value=9.6e-05 Score=64.42 Aligned_cols=66 Identities=29% Similarity=0.478 Sum_probs=58.7
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCC---CHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL---TEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~---s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+...++..|...| +++|+|+..|+..++.+.+... ..+++++++...+.|.+|+|+|++|+..+.
T Consensus 16 ~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 16 EELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFL 84 (627)
T ss_pred HHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHH
Confidence 55678889999999 9999999999999999987543 588999999999999999999999998654
No 62
>KOG0615|consensus
Probab=97.72 E-value=4.9e-06 Score=70.74 Aligned_cols=83 Identities=11% Similarity=0.014 Sum_probs=69.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccc--cccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLD--DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
.-+.|++++-++.++||||||+.+..... ....+.-+.+...-|.+||.+++.++-++|-.+| +-|....++ ++
T Consensus 361 kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP---~~R~s~~ea-L~ 436 (475)
T KOG0615|consen 361 KVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDP---ENRPSADEA-LN 436 (475)
T ss_pred hheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCc---ccCcCHHHH-hc
Confidence 34789999999999999999998776552 3344667888989999999999999999999988 669999999 99
Q ss_pred Ccccccccc
Q psy10243 95 LGFMINVLR 103 (201)
Q Consensus 95 ~~~~~~~~~ 103 (201)
|||+.....
T Consensus 437 hpW~~~~~~ 445 (475)
T KOG0615|consen 437 HPWFKDAPC 445 (475)
T ss_pred Chhhhcccc
Confidence 999975443
No 63
>PF14658 EF-hand_9: EF-hand domain
Probab=97.62 E-value=0.00022 Score=45.53 Aligned_cols=58 Identities=10% Similarity=0.019 Sum_probs=50.6
Q ss_pred eeecccCCcCC-CCHHHHHHHHHHhCC-CCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 52 VQSLIASEWYR-CSPDTRRCLLMTLRQ-AQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 52 ~f~~~~~~~~~-is~~~~~~il~~L~~-~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
.|+..+.+..+ |....+..+++.++. .|++.+++.+.+++|+++. +|+++|+.|..++
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~------~~~v~~d~F~~iM 62 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGR------DGSVNFDTFLAIM 62 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCC------CceEeHHHHHHHH
Confidence 35666666666 999999999999998 9999999999999999985 5999999999776
No 64
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.61 E-value=0.00011 Score=49.93 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=46.8
Q ss_pred eeecccC-C--cCCCCHHHHHHHHH---HhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 52 VQSLIAS-E--WYRCSPDTRRCLLM---TLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 52 ~f~~~~~-~--~~~is~~~~~~il~---~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+|..++. + .+.|+.++++.+++ .+|.+++++++..+++.+|.++ +|.|+|.+|+.++
T Consensus 15 ~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~-------dG~Idf~EFv~lm 77 (88)
T cd05029 15 IFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNK-------DQEVNFQEYVTFL 77 (88)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCC-------CCCCcHHHHHHHH
Confidence 4555554 2 33599999999996 3798899999999999999999 5999999998664
No 65
>KOG0034|consensus
Probab=97.52 E-value=0.0013 Score=50.98 Aligned_cols=82 Identities=22% Similarity=0.304 Sum_probs=66.2
Q ss_pred cccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcc-eeHHHHHHHHHHhCCCCCHH-HHHHHHHh
Q psy10243 103 RFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGI-INVAELRHVMTNLGEKLTEE-EVDAMIAV 180 (201)
Q Consensus 103 ~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~-Is~~el~~~l~~lg~~~s~~-ei~~i~~~ 180 (201)
+|.++.++|..+... ...--..++++.||.+++|. |+.+++...+......-+.+ .++-.|+.
T Consensus 48 ~g~lt~eef~~i~~~---------------~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~v 112 (187)
T KOG0034|consen 48 DGYLTKEEFLSIPEL---------------ALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRV 112 (187)
T ss_pred cCccCHHHHHHHHHH---------------hcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHH
Confidence 689999999976411 11223467888999999998 99999999998877665555 88899999
Q ss_pred hCCCCCCcccHHHHHHHHh
Q psy10243 181 ADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 181 ~d~~~~g~I~~~eF~~~l~ 199 (201)
+|.+++|.|+.+|+..++.
T Consensus 113 YD~~~~G~I~reel~~iv~ 131 (187)
T KOG0034|consen 113 YDLDGDGFISREELKQILR 131 (187)
T ss_pred hcCCCCCcCcHHHHHHHHH
Confidence 9999999999999988764
No 66
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.51 E-value=0.00016 Score=37.21 Aligned_cols=25 Identities=24% Similarity=0.513 Sum_probs=22.1
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 174 VDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 174 i~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
++.+|+.+|.|+||.|+++||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999998854
No 67
>KOG0040|consensus
Probab=97.50 E-value=0.0002 Score=68.95 Aligned_cols=68 Identities=25% Similarity=0.538 Sum_probs=60.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCC-------HHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT-------EEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s-------~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
....+...+|++||++.+|.++..+|+.+|+.+|..++ +.++++++..+|++.+|.|+..+|+.+|.+
T Consensus 2250 e~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~ 2324 (2399)
T KOG0040|consen 2250 EQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMIS 2324 (2399)
T ss_pred HHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHh
Confidence 44566778999999999999999999999999997662 337999999999999999999999999864
No 68
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.50 E-value=0.00017 Score=49.55 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=49.2
Q ss_pred ccceeecccC-Cc--CCCCHHHHHHHHHH-----hCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHH
Q psy10243 49 RRVVQSLIAS-EW--YRCSPDTRRCLLMT-----LRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITL 116 (201)
Q Consensus 49 ~~~~f~~~~~-~~--~~is~~~~~~il~~-----L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~ 116 (201)
.+.+|...+. ++ +.|+.+++..+++. +|..+++++++.+++.+|.++ +|.|+|.+|..++.
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~-------dg~I~f~eF~~l~~ 78 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNR-------DGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCC-------CCcCcHHHHHHHHH
Confidence 4455666664 53 45999999999986 567788899999999999888 59999999997654
No 69
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.45 E-value=0.00076 Score=41.10 Aligned_cols=61 Identities=30% Similarity=0.284 Sum_probs=46.9
Q ss_pred HHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 84 LRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 84 ~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
+..++..+|.++ +|.+++.+|..+.- ..........+..+|+.+|.+++|.|+.+++..++
T Consensus 2 ~~~~f~~~d~~~-------~g~l~~~e~~~~l~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDG-------DGTISADELKAALK-----------SLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCC-------CCcCcHHHHHHHHH-----------HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 345677777777 48899999987642 12234567788899999999999999999998764
No 70
>KOG0607|consensus
Probab=97.45 E-value=9.8e-05 Score=61.43 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=61.7
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccc----------------cccccceeecccCCcCCCCHHHHHHHHHHhCCCCCh
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLD----------------DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMP 81 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------------~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~ 81 (201)
=+.|++++.++.|+|||+||...-.... .......++|-+.+|..||.++++.+.+.|+.++
T Consensus 272 CDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda-- 349 (463)
T KOG0607|consen 272 CDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDA-- 349 (463)
T ss_pred ccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccH--
Confidence 3679999999999999999986543111 0122446899999999999999999999999755
Q ss_pred hHHHHHHHHHhccCcccc
Q psy10243 82 GHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 82 ~~~~~~~~~~d~~~~~~~ 99 (201)
.-+....++ ++|||++
T Consensus 350 -~~rlsa~~v-lnhPw~~ 365 (463)
T KOG0607|consen 350 -KQRLSAAQV-LNHPWVQ 365 (463)
T ss_pred -Hhhhhhhhc-cCCcccc
Confidence 456777777 9999995
No 71
>KOG2643|consensus
Probab=97.44 E-value=0.0018 Score=55.53 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=85.4
Q ss_pred cccceeecccCCcCC-CCHHHHHHHHHHhCCCCC----------hhH-HHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 48 NRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQM----------PGH-LRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s----------~~~-~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
..++.|.+.|.++++ |+.+|+..+........+ +.. ....+... +..-.+-..+++++++++|+..+
T Consensus 234 ~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsa-L~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 234 NFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSA-LLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred cceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhh-HHHHhhccCCCccccHHHHHHHH
Confidence 456788888888888 999999999876533210 000 00000000 00011123346889999999665
Q ss_pred HHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC-CCCCH--HHHHHHHHhhCCCCCCcccHH
Q psy10243 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-EKLTE--EEVDAMIAVADQEGLGYIRYE 192 (201)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg-~~~s~--~ei~~i~~~~d~~~~g~I~~~ 192 (201)
-+ -+.+-++.-|..+|+..+|.|+..++..++-... .+... ..++.+-+.+..+ +..||++
T Consensus 313 e~---------------Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~ 376 (489)
T KOG2643|consen 313 EN---------------LQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQ 376 (489)
T ss_pred HH---------------HHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHH
Confidence 21 3356667779999999999999999999987643 32222 2355566667644 5579999
Q ss_pred HHHHHH
Q psy10243 193 DFVQVM 198 (201)
Q Consensus 193 eF~~~l 198 (201)
||.++.
T Consensus 377 Ef~~Ff 382 (489)
T KOG2643|consen 377 EFKAFF 382 (489)
T ss_pred HHHHHH
Confidence 988764
No 72
>KOG2643|consensus
Probab=97.43 E-value=0.00048 Score=58.99 Aligned_cols=126 Identities=15% Similarity=0.161 Sum_probs=80.9
Q ss_pred cccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCccc
Q psy10243 55 LIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVES 134 (201)
Q Consensus 55 ~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
++....+.||+.++..++-...... .+........+....+.. +..|++.||.... .|+ ..
T Consensus 327 ~~~~~~g~Ise~DFA~~lL~~a~~n-~~~k~~~lkrvk~kf~~~----~~gISl~Ef~~Ff--~Fl------------~~ 387 (489)
T KOG2643|consen 327 FDKGDSGAISEVDFAELLLAYAGVN-SKKKHKYLKRVKEKFKDD----GKGISLQEFKAFF--RFL------------NN 387 (489)
T ss_pred hCcccccccCHHHHHHHHHHHcccc-hHhHHHHHHHHHHhccCC----CCCcCHHHHHHHH--HHH------------hh
Confidence 3333334588888877766554322 223333444442222211 3568888888543 122 11
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
...+..|...+ ....+.|+..+++++.... |.++|+..++-+|.-+|.|+||.++.+||+..|.+
T Consensus 388 l~dfd~Al~fy-~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~ 453 (489)
T KOG2643|consen 388 LNDFDIALRFY-HMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKR 453 (489)
T ss_pred hhHHHHHHHHH-HHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHH
Confidence 22333333333 2346789999999998775 89999888999999999999999999999998863
No 73
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.43 E-value=0.00026 Score=48.36 Aligned_cols=60 Identities=17% Similarity=0.058 Sum_probs=47.8
Q ss_pred ccceeeccc-CCcCC--CCHHHHHHHHHH-hC----CCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 49 RRVVQSLIA-SEWYR--CSPDTRRCLLMT-LR----QAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 49 ~~~~f~~~~-~~~~~--is~~~~~~il~~-L~----~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
.+.+|...+ .+.++ |+.++++.+++. +| ..+++++++.+++.+|.++ +|.|+|.+|+.+.
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~-------~G~I~f~eF~~l~ 78 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENG-------DGEVDFQEFVVLV 78 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCC-------CCcCcHHHHHHHH
Confidence 445666665 55443 999999999985 54 4578889999999999888 5999999999765
No 74
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.42 E-value=0.00044 Score=43.75 Aligned_cols=55 Identities=16% Similarity=0.027 Sum_probs=45.0
Q ss_pred eeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 52 VQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 52 ~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+|...+.+.++ |+.+++..+++.+|. ++++++.++..+|.++ +|.|+|.+|+.++
T Consensus 4 ~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~-------~g~i~~~ef~~~~ 59 (67)
T cd00052 4 IFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDK-------DGKLDKEEFAIAM 59 (67)
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCC-------CCcCCHHHHHHHH
Confidence 45555556555 999999999999986 6778999999998887 5899999998664
No 75
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.33 E-value=0.00039 Score=47.71 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=45.9
Q ss_pred cceeeccc-CCcC-C-CCHHHHHHHHHH-h----CCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 50 RVVQSLIA-SEWY-R-CSPDTRRCLLMT-L----RQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 50 ~~~f~~~~-~~~~-~-is~~~~~~il~~-L----~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+.+|..++ .+++ + ||.++++.+++. + +..+++.++..+++++|.++ +|.|+|.||+.++
T Consensus 13 ~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~-------dG~Idf~EF~~l~ 79 (93)
T cd05026 13 IRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNK-------DNEVDFNEFVVLV 79 (93)
T ss_pred HHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCC-------CCCCCHHHHHHHH
Confidence 34566666 4444 3 999999999976 3 33456778999999999988 5999999999765
No 76
>KOG0040|consensus
Probab=97.32 E-value=0.0015 Score=63.22 Aligned_cols=125 Identities=19% Similarity=0.245 Sum_probs=93.9
Q ss_pred ceeecccCCcCC-CCHHHHHHHHHHhCCCC-Ch-h-----HHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhh
Q psy10243 51 VVQSLIASEWYR-CSPDTRRCLLMTLRQAQ-MP-G-----HLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKM 122 (201)
Q Consensus 51 ~~f~~~~~~~~~-is~~~~~~il~~L~~~~-s~-~-----~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~ 122 (201)
..|..++.+..+ ++...++.+++++|+++ +- + +...++..+|++. +|.|+..+|.+.+++.-.
T Consensus 2257 ~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r-------~G~Vsl~dY~afmi~~ET-- 2327 (2399)
T KOG0040|consen 2257 MMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNR-------DGYVSLQDYMAFMISKET-- 2327 (2399)
T ss_pred HHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCC-------cCcccHHHHHHHHHhccc--
Confidence 356666666555 99999999999999985 22 2 5889999998887 699999999988865222
Q ss_pred hhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCC--------CCCcccHHHH
Q psy10243 123 YNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE--------GLGYIRYEDF 194 (201)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~--------~~g~I~~~eF 194 (201)
.+-...+.|..||+.+|. +.-||+..++... +|.++++-++..+.+- ..+.++|.+|
T Consensus 2328 -------eNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-------ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~df 2392 (2399)
T KOG0040|consen 2328 -------ENILSSEEIEDAFRALDA-GKPYVTKEELYQN-------LTREQAEFCMSKMKPYAETSSGRSDQVALDYKDF 2392 (2399)
T ss_pred -------ccccchHHHHHHHHHhhc-CCccccHHHHHhc-------CCHHHHHHHHHHhhhhcccccCCCccccccHHHH
Confidence 111234589999999999 7889999998754 5788888777765322 2346899999
Q ss_pred HHHHh
Q psy10243 195 VQVML 199 (201)
Q Consensus 195 ~~~l~ 199 (201)
++.+.
T Consensus 2393 v~sl~ 2397 (2399)
T KOG0040|consen 2393 VNSLF 2397 (2399)
T ss_pred HHHHh
Confidence 98764
No 77
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.32 E-value=0.00079 Score=46.33 Aligned_cols=71 Identities=15% Similarity=0.092 Sum_probs=53.9
Q ss_pred HHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 83 HLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 83 ~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
.++..+..+|.++ +|.|++.++..++.. . ......+..+|+.+|.+++|.|+.+||..++
T Consensus 11 ~l~~~F~~~D~d~-------~G~Is~~el~~~l~~-----------~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~ 70 (96)
T smart00027 11 KYEQIFRSLDKNQ-------DGTVTGAQAKPILLK-----------S--GLPQTLLAKIWNLADIDNDGELDKDEFALAM 70 (96)
T ss_pred HHHHHHHHhCCCC-------CCeEeHHHHHHHHHH-----------c--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 4667778888787 589999999876421 1 1346678899999999999999999999988
Q ss_pred HHh-----CCCCCHHH
Q psy10243 163 TNL-----GEKLTEEE 173 (201)
Q Consensus 163 ~~l-----g~~~s~~e 173 (201)
..+ |.+++.+-
T Consensus 71 ~~~~~~~~g~~~~~~~ 86 (96)
T smart00027 71 HLIYRKLNGYPIPASL 86 (96)
T ss_pred HHHHHHHcCCCCCccC
Confidence 653 66665443
No 78
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.26 E-value=0.0011 Score=47.44 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHH
Q psy10243 81 PGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRH 160 (201)
Q Consensus 81 ~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~ 160 (201)
...+.-.+..+|.++ +|.|+..|...+. .......+...|+.+|.|++|+||.+|+..
T Consensus 47 ~~~l~w~F~~lD~d~-------DG~Ls~~EL~~~~---------------l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~ 104 (116)
T cd00252 47 KDPVGWMFNQLDGNY-------DGKLSHHELAPIR---------------LDPNEHCIKPFFESCDLDKDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHHCCCC-------CCcCCHHHHHHHH---------------ccchHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 346788888999888 6999999988543 113356778899999999999999999999
Q ss_pred HHH
Q psy10243 161 VMT 163 (201)
Q Consensus 161 ~l~ 163 (201)
++.
T Consensus 105 cl~ 107 (116)
T cd00252 105 CFI 107 (116)
T ss_pred HHh
Confidence 983
No 79
>KOG2562|consensus
Probab=97.21 E-value=0.0011 Score=57.12 Aligned_cols=126 Identities=19% Similarity=0.226 Sum_probs=85.4
Q ss_pred cccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcc
Q psy10243 55 LIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVE 133 (201)
Q Consensus 55 ~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
..|++.++ |+++++..--... .+.-=++.+++++. . +.....+|.++|..|+-..+. .....
T Consensus 286 eLD~Dhd~lidk~~L~ry~d~t---lt~~ivdRIFs~v~-r--~~~~~~eGrmdykdFv~FilA-----------~e~k~ 348 (493)
T KOG2562|consen 286 ELDTDHDGLIDKEDLKRYGDHT---LTERIVDRIFSQVP-R--GFTVKVEGRMDYKDFVDFILA-----------EEDKD 348 (493)
T ss_pred hhccccccccCHHHHHHHhccc---hhhHHHHHHHhhcc-c--cceeeecCcccHHHHHHHHHH-----------hccCC
Confidence 34445555 8888776543322 23335778888662 2 223445788999999965432 33445
Q ss_pred cHHHHHHHhhhhCcCCCcceeHHHHHHHHHH-------hC-CCCC-HHHHHHHHHhhCCCCCCcccHHHHHHH
Q psy10243 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN-------LG-EKLT-EEEVDAMIAVADQEGLGYIRYEDFVQV 197 (201)
Q Consensus 134 ~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~-------lg-~~~s-~~ei~~i~~~~d~~~~g~I~~~eF~~~ 197 (201)
+...+.-.|+.+|.+++|.|+..|++-.... .| ..++ ++-+.+++..+-+...++|+..+|..+
T Consensus 349 t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~s 421 (493)
T KOG2562|consen 349 TPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKGS 421 (493)
T ss_pred CccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhhc
Confidence 6677888999999999999999999877654 23 2334 344456777777778899999999863
No 80
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.16 E-value=0.00067 Score=36.58 Aligned_cols=27 Identities=19% Similarity=0.530 Sum_probs=23.9
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 173 EVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 173 ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+++.+|+.+|.+++|.|+.+||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999987
No 81
>KOG4666|consensus
Probab=97.16 E-value=0.00083 Score=55.61 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=75.1
Q ss_pred HHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 83 HLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 83 ~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
..+.++..+|.++ +|.+||.+.+... .---.......-++-+|++|+...||++...+|.-++
T Consensus 260 ~l~~~f~LFde~~-------tg~~D~re~v~~l----------avlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~il 322 (412)
T KOG4666|consen 260 KLAPTFMLFDEGT-------TGNGDYRETVKTL----------AVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLIL 322 (412)
T ss_pred hhhhhhheecCCC-------CCcccHHHHhhhh----------eeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHH
Confidence 4667777777666 5899998887432 1112344567889999999999999999999999888
Q ss_pred HHh-CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 163 TNL-GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 163 ~~l-g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+.. | +.+=.+--+|..++...+|+|+|++|..++.
T Consensus 323 q~~lg--v~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 323 QVVLG--VEVLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred HHhcC--cceeeccccchhhhcccCcceeHHHHHHHHH
Confidence 763 4 3334466789999988899999999998764
No 82
>KOG4251|consensus
Probab=97.02 E-value=0.00038 Score=55.48 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=50.6
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC-CC--CCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-EK--LTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg-~~--~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.....+..+|+..|.|.+|+||..|+++.+..-. .+ -+.++-+-.|...|+|+||.|+|+||.--+
T Consensus 98 rsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkF 166 (362)
T KOG4251|consen 98 RSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKF 166 (362)
T ss_pred HHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHH
Confidence 3466789999999999999999999999886522 11 122344456777899999999999997543
No 83
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.97 E-value=0.00098 Score=33.95 Aligned_cols=27 Identities=52% Similarity=0.940 Sum_probs=19.4
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHHHHH
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHVMTN 164 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~l~~ 164 (201)
++.+|+.+|.+++|.|+..++..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456777777777777777777776654
No 84
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=96.94 E-value=0.0016 Score=43.96 Aligned_cols=60 Identities=15% Similarity=0.053 Sum_probs=46.9
Q ss_pred ccceeecccC--CcCC-CCHHHHHHHHHH-hCCC----CChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 49 RRVVQSLIAS--EWYR-CSPDTRRCLLMT-LRQA----QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 49 ~~~~f~~~~~--~~~~-is~~~~~~il~~-L~~~----~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
.+.+|...+. +.++ |+.+++..+++. +|.. ++.++++.++..+|.++ +|.|+|.+|+.++
T Consensus 10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~-------~g~I~f~eF~~~~ 77 (88)
T cd00213 10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNK-------DGKVDFQEFLVLI 77 (88)
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCC-------CCcCcHHHHHHHH
Confidence 3445666666 4555 999999999986 5644 35789999999998888 5899999999765
No 85
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=96.94 E-value=0.0031 Score=42.11 Aligned_cols=63 Identities=22% Similarity=0.454 Sum_probs=52.5
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHhC-C-CCCHHHHHHHHHhhCCC----CCCcccHHHHHHHHhc
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLG-E-KLTEEEVDAMIAVADQE----GLGYIRYEDFVQVMLR 200 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~lg-~-~~s~~ei~~i~~~~d~~----~~g~I~~~eF~~~l~~ 200 (201)
++..+|+.+-. +.+.||.++|...|..-. . .++.+++..++..+..+ ..+.+++++|..+|.+
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 36788999954 789999999999998764 3 47899999999998654 4789999999999875
No 86
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.70 E-value=0.0043 Score=42.05 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=44.6
Q ss_pred eeecccCC---cCCCCHHHHHHHHH-HhCCCCC----hhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 52 VQSLIASE---WYRCSPDTRRCLLM-TLRQAQM----PGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 52 ~f~~~~~~---~~~is~~~~~~il~-~L~~~~s----~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
+|..++.. .+.|+.++++.++. .+|..++ ++++..++..+|.++ +|.|+|.+|+.++
T Consensus 13 ~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~-------dG~I~f~eF~~~~ 77 (88)
T cd05030 13 VFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQ-------DGQLSFEEFLVLV 77 (88)
T ss_pred HHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCC-------CCcCcHHHHHHHH
Confidence 34444433 34599999999997 5665565 788999999999888 5999999999765
No 87
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=96.68 E-value=0.018 Score=39.17 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=48.2
Q ss_pred HHHHHHH-HhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 84 LRFMCGL-VRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 84 ~~~~~~~-~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
+...+.. .+.+++ .+.|+..||..+.-..+.... ........+..+++.+|.|++|.|+.+|+..++
T Consensus 11 l~~~F~~y~~~dg~------~~~Ls~~Elk~ll~~e~~~~~------~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~ 78 (89)
T cd05023 11 LIAVFQKYAGKDGD------SYQLSKTEFLSFMNTELASFT------KNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLI 78 (89)
T ss_pred HHHHHHHHhccCCC------cCeECHHHHHHHHHHhhhHhh------cCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 3445555 444452 248999999977643322211 122346778899999999999999999999988
Q ss_pred HHhC
Q psy10243 163 TNLG 166 (201)
Q Consensus 163 ~~lg 166 (201)
..+.
T Consensus 79 ~~l~ 82 (89)
T cd05023 79 GGLA 82 (89)
T ss_pred HHHH
Confidence 7653
No 88
>KOG4065|consensus
Probab=96.63 E-value=0.0049 Score=43.59 Aligned_cols=59 Identities=27% Similarity=0.471 Sum_probs=45.8
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHh------CC---C-CCHHHHHHHH----HhhCCCCCCcccHHHHHHH
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNL------GE---K-LTEEEVDAMI----AVADQEGLGYIRYEDFVQV 197 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~l------g~---~-~s~~ei~~i~----~~~d~~~~g~I~~~eF~~~ 197 (201)
...|++.|-|++|+++--|+.+++... |. + .++.+++.++ +.-|.|+||.|+|.||++.
T Consensus 70 fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 70 FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 357999999999999999999988653 32 2 3566665544 5567889999999999864
No 89
>KOG0751|consensus
Probab=96.46 E-value=0.034 Score=48.72 Aligned_cols=84 Identities=14% Similarity=0.239 Sum_probs=53.2
Q ss_pred CCHHH-HHHHHHHhCCC-CChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHH
Q psy10243 63 CSPDT-RRCLLMTLRQA-QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLE 140 (201)
Q Consensus 63 is~~~-~~~il~~L~~~-~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 140 (201)
.++++ ++.-+..++.+ ++++-++.+..-.|... ||-|+|.||...-.- .=.+......
T Consensus 53 mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tK-------Dglisf~eF~afe~~-------------lC~pDal~~~ 112 (694)
T KOG0751|consen 53 MTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTK-------DGLISFQEFRAFESV-------------LCAPDALFEV 112 (694)
T ss_pred cCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcc-------cccccHHHHHHHHhh-------------ccCchHHHHH
Confidence 55543 33333344432 44433444444444333 688999999965311 1122455678
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHHhC
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTNLG 166 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~lg 166 (201)
+|+.||+.++|.+|.+++.+++....
T Consensus 113 aFqlFDr~~~~~vs~~~~~~if~~t~ 138 (694)
T KOG0751|consen 113 AFQLFDRLGNGEVSFEDVADIFGQTN 138 (694)
T ss_pred HHHHhcccCCCceehHHHHHHHhccc
Confidence 99999999999999999999998743
No 90
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.42 E-value=0.0042 Score=31.43 Aligned_cols=28 Identities=25% Similarity=0.528 Sum_probs=24.4
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 173 EVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 173 ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
+++.+++.+|.+++|.|++.+|..++.+
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3677899999999999999999998764
No 91
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.34 E-value=0.011 Score=40.26 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=42.8
Q ss_pred eecccCCcCCCCHHHHHHHHHH-----hCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 53 QSLIASEWYRCSPDTRRCLLMT-----LRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 53 f~~~~~~~~~is~~~~~~il~~-----L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
|.-+..+.+.+|..+++.+++. ++..-.++.++.+++..|.++ +|.|+|.||..+.
T Consensus 14 FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~-------Dg~vdF~EF~~Lv 74 (91)
T cd05024 14 FHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCR-------DGKVGFQSFFSLI 74 (91)
T ss_pred HHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCC-------CCcCcHHHHHHHH
Confidence 4444445556999999988853 344445778999999999998 6999999999654
No 92
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.23 E-value=0.021 Score=34.51 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=26.7
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l 165 (201)
-.......+|+.+|++++|.+..+|+....+.+
T Consensus 18 ~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 18 MDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp --HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 446778889999999999999999999887654
No 93
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.07 E-value=0.025 Score=48.86 Aligned_cols=57 Identities=19% Similarity=0.139 Sum_probs=45.0
Q ss_pred CCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHH
Q psy10243 77 QAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVA 156 (201)
Q Consensus 77 ~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~ 156 (201)
.......++.+++.+|.++ +|.|+..||.. +..+|+.+|.|++|.|+.+
T Consensus 329 ~~~~~~~l~~aF~~~D~dg-------dG~Is~~E~~~------------------------~~~~F~~~D~d~DG~Is~e 377 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDG-------DGFITREEWLG------------------------SDAVFDALDLNHDGKITPE 377 (391)
T ss_pred cChhhHHHHHHHHHhCCCC-------CCcCcHHHHHH------------------------HHHHHHHhCCCCCCCCcHH
Confidence 3344456777777777777 68899998851 3568999999999999999
Q ss_pred HHHHHHHH
Q psy10243 157 ELRHVMTN 164 (201)
Q Consensus 157 el~~~l~~ 164 (201)
|+..++..
T Consensus 378 Ef~~~~~~ 385 (391)
T PRK12309 378 EMRAGLGA 385 (391)
T ss_pred HHHHHHHH
Confidence 99998865
No 94
>KOG1029|consensus
Probab=95.93 E-value=0.012 Score=54.00 Aligned_cols=64 Identities=19% Similarity=0.401 Sum_probs=56.8
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+.-+.+..|..+|+..+|++|...-+.+|...| ++...+..|+...|.|+||+++.+||+-.|
T Consensus 192 ~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 192 HNKLKYRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred hhhhHHHHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHHHH
Confidence 4456778899999999999999999999998766 778889999999999999999999998654
No 95
>KOG2562|consensus
Probab=95.74 E-value=0.056 Score=46.97 Aligned_cols=94 Identities=26% Similarity=0.335 Sum_probs=61.1
Q ss_pred cccccHHHHHHHHHHHHHhhhhhhhhc---CCcccHHHHHHH---hhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHH
Q psy10243 103 RFSLTFVNFVMITLSGCLKMYNTEYRV---KDVESGEELLEA---FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDA 176 (201)
Q Consensus 103 ~g~i~f~eF~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~---F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~ 176 (201)
.|.|+..+-.+..+...+..+...... ..-...+....+ |-.+|+|++|.|+.++|+..-. ..++.--++.
T Consensus 239 tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d---~tlt~~ivdR 315 (493)
T KOG2562|consen 239 TGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD---HTLTERIVDR 315 (493)
T ss_pred CCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhc---cchhhHHHHH
Confidence 478888777765544333322211111 111223334444 8888999999999999987632 3456777899
Q ss_pred HHHhh----CCCCCCcccHHHHHHHHh
Q psy10243 177 MIAVA----DQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 177 i~~~~----d~~~~g~I~~~eF~~~l~ 199 (201)
+|..+ -...+|+++|++|+-++.
T Consensus 316 IFs~v~r~~~~~~eGrmdykdFv~Fil 342 (493)
T KOG2562|consen 316 IFSQVPRGFTVKVEGRMDYKDFVDFIL 342 (493)
T ss_pred HHhhccccceeeecCcccHHHHHHHHH
Confidence 99943 335789999999998764
No 96
>KOG0751|consensus
Probab=95.64 E-value=0.15 Score=44.97 Aligned_cols=138 Identities=16% Similarity=0.088 Sum_probs=80.9
Q ss_pred ccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHH----------
Q psy10243 49 RRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLS---------- 117 (201)
Q Consensus 49 ~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~---------- 117 (201)
.+-+-...|...++ ||-.+++..-..+-. | +.-....+..+|..++ |.+++.+|..+.-.
T Consensus 76 v~Lla~iaD~tKDglisf~eF~afe~~lC~-p-Dal~~~aFqlFDr~~~-------~~vs~~~~~~if~~t~l~~~~~f~ 146 (694)
T KOG0751|consen 76 VRLLASIADQTKDGLISFQEFRAFESVLCA-P-DALFEVAFQLFDRLGN-------GEVSFEDVADIFGQTNLHHHIPFN 146 (694)
T ss_pred HHHHHhhhhhcccccccHHHHHHHHhhccC-c-hHHHHHHHHHhcccCC-------CceehHHHHHHHhccccccCCCcc
Confidence 33344444555566 999988877666554 2 3345555666666653 55555555432110
Q ss_pred ---HHHhhhh-----------hhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCC
Q psy10243 118 ---GCLKMYN-----------TEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQ 183 (201)
Q Consensus 118 ---~~~~~~~-----------~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~ 183 (201)
+|++.+. .-.........+.-+++|+.-|+.++|.||.-+++.++...-.++....++..+.....
T Consensus 147 ~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vag 226 (694)
T KOG0751|consen 147 WDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAG 226 (694)
T ss_pred CCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcC
Confidence 0111100 00011112346678899999999999999999999999887766666667666655543
Q ss_pred CCCC-cccHHHHH
Q psy10243 184 EGLG-YIRYEDFV 195 (201)
Q Consensus 184 ~~~g-~I~~~eF~ 195 (201)
..++ ++||..|.
T Consensus 227 g~~~H~vSf~yf~ 239 (694)
T KOG0751|consen 227 GNDSHQVSFSYFN 239 (694)
T ss_pred CCCccccchHHHH
Confidence 3333 66665553
No 97
>KOG0041|consensus
Probab=95.60 E-value=0.02 Score=44.47 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=68.2
Q ss_pred ccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhh
Q psy10243 49 RRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEY 127 (201)
Q Consensus 49 ~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~ 127 (201)
....|..+|.+.++ |+--+++..+..||...|.=.+..++..+|.|+ +|.|+|.+|+-+.-. ..
T Consensus 101 ~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~-------dgklSfreflLIfrk--------aa 165 (244)
T KOG0041|consen 101 AESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDF-------DGKLSFREFLLIFRK--------AA 165 (244)
T ss_pred HHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhccc-------ccchhHHHHHHHHHH--------Hh
Confidence 34468888888877 999999999999999777777999999999999 699999999954311 00
Q ss_pred hcCCcccHHHHHHH--hhhhCcCCCcceeHHHHHHHH
Q psy10243 128 RVKDVESGEELLEA--FRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 128 ~~~~~~~~~~l~~~--F~~~D~~~~G~Is~~el~~~l 162 (201)
...... ...+... ....|..+.|......|-++=
T Consensus 166 agEL~~-ds~~~~LAr~~eVDVskeGV~GAknFFeAK 201 (244)
T KOG0041|consen 166 AGELQE-DSGLLRLARLSEVDVSKEGVSGAKNFFEAK 201 (244)
T ss_pred cccccc-chHHHHHHHhcccchhhhhhhhHHHHHHHH
Confidence 011111 1122222 234788888877776665553
No 98
>KOG3555|consensus
Probab=95.58 E-value=0.018 Score=48.18 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=54.5
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.-...+.-.|..+|.|.+|.++..||+.+-.. -.+.=++.+|+.+|...||.|+-.||..++.+
T Consensus 247 ~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ld----knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 247 ICKDSLGWMFNKLDTNYDLLLDQSELRAIELD----KNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred chhhhhhhhhhccccccccccCHHHhhhhhcc----CchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 44678889999999999999999999987432 23566899999999999999999999987754
No 99
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=95.35 E-value=0.0082 Score=38.78 Aligned_cols=58 Identities=28% Similarity=0.422 Sum_probs=41.9
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCC-------CCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE-------GLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~-------~~g~I~~~eF~~~l 198 (201)
.+.+.+..+|+.+ .++.++||..||++.| +.++++.++.++..- ..|..+|..|++.+
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l-------~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSL-------TPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS--------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHc-------CcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 3467899999999 7888999999999985 334456666665432 23789999997643
No 100
>KOG0599|consensus
Probab=95.31 E-value=0.0085 Score=49.19 Aligned_cols=77 Identities=13% Similarity=0.064 Sum_probs=63.4
Q ss_pred hhHHHHHHHHhHhcCCcceeeeccccc-cccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcc
Q psy10243 19 QRVTILIEFIFINVGYLHLTLESEKLD-DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGF 97 (201)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~ 97 (201)
+.|+.++.++-++.|-+||.-..+-.- ...+..-++|-..+|+.+|.+.++.+.++|.++| ..|.+..++ +.|||
T Consensus 210 D~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp---~~Ritake~-LaHpf 285 (411)
T KOG0599|consen 210 DEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDP---TKRITAKEA-LAHPF 285 (411)
T ss_pred hHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCc---hhcccHHHH-hcChH
Confidence 579999999999999999984322111 2234567999999999999999999999999988 668888999 99999
Q ss_pred cc
Q psy10243 98 MI 99 (201)
Q Consensus 98 ~~ 99 (201)
++
T Consensus 286 f~ 287 (411)
T KOG0599|consen 286 FI 287 (411)
T ss_pred HH
Confidence 84
No 101
>KOG4251|consensus
Probab=95.28 E-value=0.076 Score=42.65 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=48.2
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
++.=..+|.|++|.+|.+||....--......-.++..++...|.+++.+++.++.+.
T Consensus 284 kEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d~n~~~~Ls~eell~ 341 (362)
T KOG4251|consen 284 KEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTDANNDEKLSLEELLE 341 (362)
T ss_pred HHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhccCCCcccCHHHHHH
Confidence 3333578999999999999999876666666778889999999999999999998764
No 102
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=94.78 E-value=0.25 Score=37.08 Aligned_cols=63 Identities=22% Similarity=0.468 Sum_probs=49.1
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHhC---CCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLG---EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~lg---~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+-.+|..|.+.+...++..-+.++++..| ..++..+++-+|..+-..+..+|+|++|..+|.
T Consensus 3 ~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 3 AVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHH
T ss_pred HHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHH
Confidence 344556566666777899999999999975 458999999999998877778899999998874
No 103
>KOG0377|consensus
Probab=94.77 E-value=0.16 Score=44.21 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHh
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAF 142 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F 142 (201)
+..++-..++..|=. ....+..+++-+|.||+ |.|+.+||...+- .+. ......-....+-+.-
T Consensus 530 ~~~ea~~slvetLYr--~ks~LetiF~~iD~D~S-------G~isldEF~~a~~-----l~~--sh~~~~i~~~~i~~la 593 (631)
T KOG0377|consen 530 ILEEAGSSLVETLYR--NKSSLETIFNIIDADNS-------GEISLDEFRTAWK-----LLS--SHMNGAISDDEILELA 593 (631)
T ss_pred HHHHHHhHHHHHHHh--chhhHHHHHHHhccCCC-------CceeHHHHHHHHH-----HHH--hhcCCCcCHHHHHHHH
Confidence 444444444555422 23368899999999995 8899999997651 121 1233334567788888
Q ss_pred hhhCcCCCcceeHHHHHHHHHHh
Q psy10243 143 RVFDKDGDGIINVAELRHVMTNL 165 (201)
Q Consensus 143 ~~~D~~~~G~Is~~el~~~l~~l 165 (201)
+.+|-|+||.|+.+||-++++-+
T Consensus 594 ~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 594 RSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HhhccCCCCcccHHHHHHHHhhh
Confidence 99999999999999999998764
No 104
>KOG4578|consensus
Probab=94.70 E-value=0.022 Score=47.39 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=49.1
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHH---HHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRH---VMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~---~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+..+...|..+|+|+++.|...|.+- ++.+.. -...-.+.+++.+|.|+|.+|++.|+..++.
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s--~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~ 397 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKS--KPRKCSRKFFKYCDLNKDKKISLDEWRGCLG 397 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhhc--cHHHHhhhcchhcccCCCceecHHHHhhhhc
Confidence 44567789999999999999999654 443322 1244567899999999999999999998874
No 105
>KOG1955|consensus
Probab=94.70 E-value=0.072 Score=46.79 Aligned_cols=64 Identities=22% Similarity=0.364 Sum_probs=57.0
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
++.+.....|+.+..|-.|+|+-.--+..+.+.. ++-+|+.-||...|.+.||.++..||+..+
T Consensus 228 EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSk--lpi~ELshIWeLsD~d~DGALtL~EFcAAf 291 (737)
T KOG1955|consen 228 EQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSK--LPIEELSHIWELSDVDRDGALTLSEFCAAF 291 (737)
T ss_pred HHHHHHHhhhhcccCCcccccccHHHHhhhhhcc--CchHHHHHHHhhcccCccccccHHHHHhhH
Confidence 5566777889999999999999999999988755 667899999999999999999999999875
No 106
>KOG0583|consensus
Probab=94.29 E-value=0.039 Score=47.37 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=54.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccce-eecccCCcCCC-CHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVV-QSLIASEWYRC-SPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-f~~~~~~~~~i-s~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
...+-|+.+|-++.|.||++||...... ....+.. -.+.-. ..+ |.+....+.++|..+|. .|..+.++ .
T Consensus 202 ~~aDvWS~GViLy~ml~G~~PF~d~~~~--~l~~ki~~~~~~~p--~~~~S~~~~~Li~~mL~~~P~---~R~t~~~i-~ 273 (370)
T KOG0583|consen 202 KAADVWSLGVILYVLLCGRLPFDDSNVP--NLYRKIRKGEFKIP--SYLLSPEARSLIEKMLVPDPS---TRITLLEI-L 273 (370)
T ss_pred chhhhhhhHHHHHHHHhCCCCCCCccHH--HHHHHHhcCCccCC--CCcCCHHHHHHHHHHcCCCcc---cCCCHHHH-h
Confidence 5678899999999999999999962211 1111110 001111 225 99999999999999883 48999999 5
Q ss_pred cCccccc
Q psy10243 94 DLGFMIN 100 (201)
Q Consensus 94 ~~~~~~~ 100 (201)
.|+|++.
T Consensus 274 ~h~w~~~ 280 (370)
T KOG0583|consen 274 EHPWFQK 280 (370)
T ss_pred hChhhcc
Confidence 9999976
No 107
>KOG4236|consensus
Probab=94.03 E-value=0.01 Score=52.81 Aligned_cols=77 Identities=10% Similarity=0.151 Sum_probs=62.9
Q ss_pred hhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 19 QRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+||++++.+++-+-|-+||.-..+ .+.......|-+-..+|..||.++.+++-+.|.+.. +.|..+... ++|+|+
T Consensus 748 DMWSVGVIiYVsLSGTFPFNEdEd-IndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm---~kRysvdk~-lsh~Wl 822 (888)
T KOG4236|consen 748 DMWSVGVIIYVSLSGTFPFNEDED-INDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKM---RKRYSVDKS-LSHPWL 822 (888)
T ss_pred cceeeeEEEEEEecccccCCCccc-hhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHH---HHhcchHhh-ccchhh
Confidence 589998888888888888874433 333345557888899999999999999999998865 788999999 999999
Q ss_pred cc
Q psy10243 99 IN 100 (201)
Q Consensus 99 ~~ 100 (201)
++
T Consensus 823 q~ 824 (888)
T KOG4236|consen 823 QD 824 (888)
T ss_pred hc
Confidence 74
No 108
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=93.61 E-value=0.12 Score=36.22 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=46.7
Q ss_pred cccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHH
Q psy10243 48 NRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 48 ~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
....+|...+...+.|+.+....++..-|. +.+.+..+++.+|.++ +|.+++.||...+
T Consensus 11 ~y~~~F~~l~~~~g~isg~~a~~~f~~S~L--~~~~L~~IW~LaD~~~-------dG~L~~~EF~iAm 69 (104)
T PF12763_consen 11 KYDQIFQSLDPQDGKISGDQAREFFMKSGL--PRDVLAQIWNLADIDN-------DGKLDFEEFAIAM 69 (104)
T ss_dssp HHHHHHHCTSSSTTEEEHHHHHHHHHHTTS--SHHHHHHHHHHH-SSS-------SSEEEHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEeHHHHHHHHHHcCC--CHHHHHHHHhhhcCCC-------CCcCCHHHHHHHH
Confidence 345567766655555999999999888777 5678999999999998 6999999999765
No 109
>KOG0605|consensus
Probab=93.43 E-value=0.05 Score=48.14 Aligned_cols=85 Identities=12% Similarity=-0.019 Sum_probs=54.9
Q ss_pred chhHHHHHHHHhHhcCCcceeeecccccc-ccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHH-HHHHHHhccC
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDD-CNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLR-FMCGLVRLDL 95 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~-~~~~~~d~~~ 95 (201)
-+=|+++..++=|++||+||..++-..+= -....--.+.-.....+|.+++++|-++|- ++.. .+. .-+.++ ..|
T Consensus 369 cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~-RLG~~G~~EI-K~H 445 (550)
T KOG0605|consen 369 CDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPEN-RLGSKGAEEI-KKH 445 (550)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHH-hcCcccHHHH-hcC
Confidence 35699999999999999999976543321 111111122222334599999999999997 4422 222 456778 899
Q ss_pred ccccccccccccHHH
Q psy10243 96 GFMINVLRFSLTFVN 110 (201)
Q Consensus 96 ~~~~~~~~g~i~f~e 110 (201)
||| ..|+|+.
T Consensus 446 PfF-----~~v~W~~ 455 (550)
T KOG0605|consen 446 PFF-----KGVDWDH 455 (550)
T ss_pred Ccc-----ccCCcch
Confidence 999 4455543
No 110
>KOG0169|consensus
Probab=93.42 E-value=0.73 Score=42.60 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=95.4
Q ss_pred eeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcC
Q psy10243 52 VQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVK 130 (201)
Q Consensus 52 ~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~ 130 (201)
+|...+.+..+ ++..+...+++.++...+....+.++.+++..+ .+++...+|......
T Consensus 141 ~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~-------~~k~~~~~~~~~~~~------------- 200 (746)
T KOG0169|consen 141 IFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQ-------TGKLEEEEFVKFRKE------------- 200 (746)
T ss_pred HHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------cceehHHHHHHHHHh-------------
Confidence 56666666666 999999999999988887777888888884444 578888888865311
Q ss_pred CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC--CCCCHHHHHHHHHhhCCC----CCCcccHHHHHHHHhc
Q psy10243 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG--EKLTEEEVDAMIAVADQE----GLGYIRYEDFVQVMLR 200 (201)
Q Consensus 131 ~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg--~~~s~~ei~~i~~~~d~~----~~g~I~~~eF~~~l~~ 200 (201)
..... ++...|..+-.+ .++++.++|...+...+ ..++.+.++++++.+... ..+.++.+.|..+|.+
T Consensus 201 ~~~rp-ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S 274 (746)
T KOG0169|consen 201 LTKRP-EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFS 274 (746)
T ss_pred hccCc-hHHHHHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcC
Confidence 11122 677788776444 89999999999999875 457889999999888543 4566999999998864
No 111
>KOG0042|consensus
Probab=93.03 E-value=0.18 Score=45.13 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=59.6
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
......+.-|..+|.++.|+++..++.++|++.+...+++.+++++.+.+.+-+|.+...||..++.
T Consensus 590 ~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s 656 (680)
T KOG0042|consen 590 EDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMS 656 (680)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHH
Confidence 3345566779999999999999999999999999899999999999999988899999999988764
No 112
>KOG2243|consensus
Probab=92.99 E-value=0.19 Score=49.29 Aligned_cols=58 Identities=29% Similarity=0.595 Sum_probs=50.9
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.|+.+|+++.|.|+..++.+++.. ....++.+++-+++-...|.+...+|++|+.-+-
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~-~k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEG-HKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhc-cccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 488899999999999999999864 3457899999999999999999999999997653
No 113
>KOG4717|consensus
Probab=92.95 E-value=0.16 Score=45.43 Aligned_cols=82 Identities=9% Similarity=0.029 Sum_probs=61.2
Q ss_pred CCcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 15 LPITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
-|+-+-|++++.++++.||-+||.-..+-++. -..+-|.+.. -..+|.+..+.+..+|..+| ..|..+.++ .+
T Consensus 197 APAVDiWSLGVILyMLVCGq~PFqeANDSETL--TmImDCKYtv-PshvS~eCrdLI~sMLvRdP---kkRAslEeI-~s 269 (864)
T KOG4717|consen 197 APAVDIWSLGVILYMLVCGQPPFQEANDSETL--TMIMDCKYTV-PSHVSKECRDLIQSMLVRDP---KKRASLEEI-VS 269 (864)
T ss_pred CcchhhhHHHHHHHHHHhCCCccccccchhhh--hhhhcccccC-chhhhHHHHHHHHHHHhcCc---hhhccHHHH-hc
Confidence 57889999999999999999999754333221 1223333332 24599999999999999987 678889999 89
Q ss_pred Ccccccccc
Q psy10243 95 LGFMINVLR 103 (201)
Q Consensus 95 ~~~~~~~~~ 103 (201)
++|++-...
T Consensus 270 ~~Wlq~~D~ 278 (864)
T KOG4717|consen 270 TSWLQAGDR 278 (864)
T ss_pred cccccCCCC
Confidence 999975433
No 114
>KOG0035|consensus
Probab=92.57 E-value=0.28 Score=46.21 Aligned_cols=68 Identities=21% Similarity=0.143 Sum_probs=56.7
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCH-----HHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE-----EEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~-----~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
....+++..|+.+|+...|.++.+++..++..+|....+ +++..+++..|.+.-|+++|.+|...|.+
T Consensus 744 ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 744 YVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred HHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 457789999999999999999999999999999987664 34455666677777799999999988764
No 115
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=92.19 E-value=0.57 Score=34.51 Aligned_cols=80 Identities=14% Similarity=0.072 Sum_probs=45.5
Q ss_pred CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHH
Q psy10243 58 SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEE 137 (201)
Q Consensus 58 ~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (201)
..|..+|++++..+.+...+ +...+..+++++..++.-..-..++.|+|+.|...+ .. -+...-+.+-
T Consensus 3 ~~~~~lsp~eF~qLq~y~ey--s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm-~~---------yLe~d~P~~l 70 (138)
T PF14513_consen 3 KEWVSLSPEEFAQLQKYSEY--STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFM-KT---------YLEVDLPEDL 70 (138)
T ss_dssp ---S-S-HHHHHHHHHHHHH------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHH-HH---------HTT-S--HHH
T ss_pred cceeccCHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHH-HH---------HHcCCCCHHH
Confidence 46899999999999999987 455799999999655543333346789999999654 11 1222245667
Q ss_pred HHHHhhhhCcCC
Q psy10243 138 LLEAFRVFDKDG 149 (201)
Q Consensus 138 l~~~F~~~D~~~ 149 (201)
++..|..|-+..
T Consensus 71 c~hLF~sF~~~~ 82 (138)
T PF14513_consen 71 CQHLFLSFQKKP 82 (138)
T ss_dssp HHHHHHHS----
T ss_pred HHHHHHHHhCcc
Confidence 778888875544
No 116
>KOG1707|consensus
Probab=91.91 E-value=1.2 Score=40.33 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=83.0
Q ss_pred eeecccCCcCC-CCHHHHHHHHH-HhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHH---HHHh-----
Q psy10243 52 VQSLIASEWYR-CSPDTRRCLLM-TLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLS---GCLK----- 121 (201)
Q Consensus 52 ~f~~~~~~~~~-is~~~~~~il~-~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~---~~~~----- 121 (201)
+|.+-+.+.++ +|..++-...+ +++.+..+.++..+...++...+.-.. ...++...|+.+... .+.+
T Consensus 200 IFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~--~~~ltl~GFLfL~~lfiergr~EttW~ 277 (625)
T KOG1707|consen 200 IFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVY--ERGLTLPGFLFLNTLFIERGRHETTWT 277 (625)
T ss_pred HHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhh--hccccccchHHHHHHHHHhccccchhh
Confidence 67777777777 88877766655 778888887777777777544431111 234555566643211 1100
Q ss_pred hhhh-----h---------hhcC---------CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCC----CHHHH
Q psy10243 122 MYNT-----E---------YRVK---------DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL----TEEEV 174 (201)
Q Consensus 122 ~~~~-----~---------~~~~---------~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~----s~~ei 174 (201)
++.+ . ...+ ...-.+.+..+|..||.|+||.++..|+..++...+... ...+.
T Consensus 278 iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~ 357 (625)
T KOG1707|consen 278 ILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDS 357 (625)
T ss_pred hhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCccccc
Confidence 0000 0 0000 112256788899999999999999999999999865332 11111
Q ss_pred HHHHHhhCCCCCCcccHHHHHHH
Q psy10243 175 DAMIAVADQEGLGYIRYEDFVQV 197 (201)
Q Consensus 175 ~~i~~~~d~~~~g~I~~~eF~~~ 197 (201)
- -.+..|.++|.-|+..
T Consensus 358 t------~~~~~G~ltl~g~l~~ 374 (625)
T KOG1707|consen 358 T------VKNERGWLTLNGFLSQ 374 (625)
T ss_pred c------eecccceeehhhHHHH
Confidence 1 1125788888887753
No 117
>PLN02952 phosphoinositide phospholipase C
Probab=91.79 E-value=1.6 Score=39.79 Aligned_cols=88 Identities=16% Similarity=0.326 Sum_probs=60.7
Q ss_pred cccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCC--CCCHHHHHHHHHh
Q psy10243 103 RFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGE--KLTEEEVDAMIAV 180 (201)
Q Consensus 103 ~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~--~~s~~ei~~i~~~ 180 (201)
.|.++|.+|.... . ..+........++..+|..+-. +.+.++.++|...|..... ..+.+++..++..
T Consensus 14 ~g~l~f~~f~~f~-----~----~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~ 83 (599)
T PLN02952 14 SGSYNYKMFNLFN-----R----KFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEE 83 (599)
T ss_pred CCCcCHHHHHHHH-----H----HhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 3789999997542 1 1112223357889999999854 4468999999999998652 3677777777665
Q ss_pred hC-------CCCCCcccHHHHHHHHhc
Q psy10243 181 AD-------QEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 181 ~d-------~~~~g~I~~~eF~~~l~~ 200 (201)
+- ..+.+.++++.|..+|.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 84 VINRRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHhhccccccccccCcCHHHHHHHHcC
Confidence 41 112346899999998864
No 118
>KOG0169|consensus
Probab=91.35 E-value=0.42 Score=44.08 Aligned_cols=66 Identities=20% Similarity=0.338 Sum_probs=59.1
Q ss_pred cHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 134 ~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
...-+..+|+..|++++|.++..+...+++.+...+++..+..++++.+..+++++...+|+++..
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~ 199 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRK 199 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHH
Confidence 345577889999999999999999999999999999999999999999888899999999887653
No 119
>KOG3866|consensus
Probab=91.07 E-value=0.38 Score=40.03 Aligned_cols=58 Identities=19% Similarity=0.389 Sum_probs=42.9
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHH----hCCCC-CHHHH-----------HHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTN----LGEKL-TEEEV-----------DAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~----lg~~~-s~~ei-----------~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.|...|.|++|+++..||..++.. +-.+- .+++. +-+++.+|+|.|.-|+.+||++.-
T Consensus 249 FF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 249 FFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred heeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence 477888999999999999998865 21111 11111 337788999999999999998753
No 120
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=90.66 E-value=0.49 Score=33.57 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=36.2
Q ss_pred hHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHH
Q psy10243 82 GHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRH 160 (201)
Q Consensus 82 ~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~ 160 (201)
..+.-.+.++|.++ +|.++-.|...+. ..-......++..|+.+|.|+||.||..|...
T Consensus 54 ~~~~W~F~~LD~n~-------d~~L~~~El~~l~-------------~~l~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQLDRNK-------DGVLDRSELKPLR-------------RPLMPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH--T--------SSEE-TTTTGGGG-------------STTSTTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhhcCCC-------CCccCHHHHHHHH-------------HHHhhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34677788888887 5777766655321 11123344677889999999999999999764
No 121
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=90.41 E-value=1.2 Score=33.92 Aligned_cols=64 Identities=17% Similarity=0.291 Sum_probs=49.9
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCC-----------------------------------------------
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL----------------------------------------------- 169 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~----------------------------------------------- 169 (201)
.+++=..-||+|+||.|.+-|--..++.+|..+
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 345556678999999999999888777766421
Q ss_pred ------CHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 170 ------TEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 170 ------s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.++..+++|+.++..+.+.+++.|..+++..
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 1567789999998877888999999888754
No 122
>KOG4347|consensus
Probab=90.12 E-value=2.5 Score=38.59 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHhCCC--CChhHHHHHHHHHhccC----ccccccccccccHHHHHH-HHHHHHHhhhhhhhhcCCcccH
Q psy10243 63 CSPDTRRCLLMTLRQA--QMPGHLRFMCGLVRLDL----GFMINVLRFSLTFVNFVM-ITLSGCLKMYNTEYRVKDVESG 135 (201)
Q Consensus 63 is~~~~~~il~~L~~~--~s~~~~~~~~~~~d~~~----~~~~~~~~g~i~f~eF~~-~~~~~~~~~~~~~~~~~~~~~~ 135 (201)
+-.-.++.+++.+.+. .+.+++..+...+...| .+.. ....+++-|.. +....+...+....... ...
T Consensus 480 le~~~krt~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~---~~~p~~~~~eqyi~~~~f~~~f~~l~pw~--~s~ 554 (671)
T KOG4347|consen 480 LEDFTKRTILRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLG---RSDPDFEAFEQYIDYAQFLEVFRELLPWA--VSL 554 (671)
T ss_pred HhhhhHHHHHHhhcccCccCHHHHHHHHHHHHHHHhccCcccC---CCCCCchHHHHHHHHhhHHHHhhccCchh--HHH
Confidence 3345667777777653 46666665555442222 1111 12233333332 33334444333211111 345
Q ss_pred HHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHH
Q psy10243 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192 (201)
Q Consensus 136 ~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~ 192 (201)
.-+.+.|+.+|.+++|.|+..++...|..+...--.+.+.-+++.++++++ ..+-+
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e 610 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDRE 610 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccc
Confidence 567889999999999999999999999887655556677888999988877 55544
No 123
>KOG0580|consensus
Probab=89.81 E-value=0.25 Score=39.87 Aligned_cols=75 Identities=15% Similarity=0.021 Sum_probs=52.0
Q ss_pred hhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 19 QRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.|.+.+=-+=+.+|++||...+....=...+.+- +.. ...||.++.+++.++|+.+|. -|....++ .+|+|+
T Consensus 204 d~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~-~~~--p~~is~~a~dlI~~ll~~~p~---~r~~l~~v-~~hpwI 276 (281)
T KOG0580|consen 204 DLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD-LKF--PSTISGGAADLISRLLVKNPI---ERLALTEV-MDHPWI 276 (281)
T ss_pred hHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc-ccC--CcccChhHHHHHHHHhccCcc---ccccHHHH-hhhHHH
Confidence 46777776666779999998777443322222221 122 156999999999999999884 36666777 799998
Q ss_pred cc
Q psy10243 99 IN 100 (201)
Q Consensus 99 ~~ 100 (201)
..
T Consensus 277 ~a 278 (281)
T KOG0580|consen 277 VA 278 (281)
T ss_pred Hh
Confidence 53
No 124
>KOG0603|consensus
Probab=89.27 E-value=0.4 Score=43.37 Aligned_cols=76 Identities=8% Similarity=0.008 Sum_probs=57.9
Q ss_pred CCcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 15 LPITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
=+..+-|++++-++-|+||+.++...+..... ...+ . ..+-...||.++++.+-.+|..+| ..|..+.++ ..
T Consensus 491 t~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei--~~~i-~-~~~~s~~vS~~AKdLl~~LL~~dP---~~Rl~~~~i-~~ 562 (612)
T KOG0603|consen 491 TEACDWWSLGVLLYEMLTGRTLFAAHPAGIEI--HTRI-Q-MPKFSECVSDEAKDLLQQLLQVDP---ALRLGADEI-GA 562 (612)
T ss_pred CcchhhHHHHHHHHHHHhCCCccccCCchHHH--HHhh-c-CCccccccCHHHHHHHHHhccCCh---hhCcChhhh-cc
Confidence 35678899999999999999999877665211 1110 0 011114599999999999999988 789999999 89
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
|+|+
T Consensus 563 h~w~ 566 (612)
T KOG0603|consen 563 HPWF 566 (612)
T ss_pred Ccch
Confidence 9999
No 125
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=89.16 E-value=0.57 Score=37.54 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=59.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeec--ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL--IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~--~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
-++.|++++-+.-|.+|..|+........ ........ ...+...++.+....+.++|..+| +-|..++++ ..
T Consensus 187 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rp~~~~i-l~ 260 (283)
T cd06617 187 KSDVWSLGITMIELATGRFPYDSWKTPFQ--QLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNY---KERPNYPEL-LQ 260 (283)
T ss_pred cccchhhHHHHHHHHhCCCCCCccccCHH--HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCh---hhCcCHHHH-hc
Confidence 46889999999999999988753211100 01111100 011113478888889999999987 678888999 89
Q ss_pred CccccccccccccHHHHH
Q psy10243 95 LGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 95 ~~~~~~~~~g~i~f~eF~ 112 (201)
|+|+.+......+..+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~ 278 (283)
T cd06617 261 HPFFELHLSKNTDVASFV 278 (283)
T ss_pred CchhhhcccccHHHHHHH
Confidence 999987766556666655
No 126
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=88.56 E-value=0.87 Score=36.63 Aligned_cols=89 Identities=10% Similarity=0.036 Sum_probs=59.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc----cceeecccC--CcCCCCHHHHHHHHHHhCCCCChhHHHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR----RVVQSLIAS--EWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~f~~~~~--~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~ 90 (201)
.++.|++++.+.-|.+|.+|+............ +........ ....++.+..+.+.+++..+| +.|..+.+
T Consensus 173 ~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~Rp~~~e 249 (279)
T cd06619 173 HSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQP---KERPAPEN 249 (279)
T ss_pred cchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCCh---hhCCCHHH
Confidence 478899999999999999887542221111000 111111111 123478888999999999877 67888899
Q ss_pred HhccCccccccccccccHH
Q psy10243 91 VRLDLGFMINVLRFSLTFV 109 (201)
Q Consensus 91 ~d~~~~~~~~~~~g~i~f~ 109 (201)
+ .+|+|++....+.++.-
T Consensus 250 i-l~~~~~~~~~~~~~~~~ 267 (279)
T cd06619 250 L-MDHPFIVQYNDGNAEVV 267 (279)
T ss_pred H-hcCcccccccCccHHHH
Confidence 8 89999988777776543
No 127
>KOG4666|consensus
Probab=88.07 E-value=1.2 Score=37.39 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=54.8
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
.+.++..|..||.+++|.++..|-...+.-+ |.+.+.+.++.-|+.++.+.||.+.-.+|--+++
T Consensus 258 sd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq 323 (412)
T KOG4666|consen 258 SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQ 323 (412)
T ss_pred hhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHH
Confidence 4678889999999999999988887777665 5778899999999999999999888877765543
No 128
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=87.90 E-value=1.3 Score=28.01 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=30.1
Q ss_pred CcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 59 EWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 59 ~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
+++.|+++.++..+..+|.+||+..++.+++.+
T Consensus 28 ~NPpine~mir~M~~QMG~kpSekqi~Q~m~~m 60 (64)
T PF03672_consen 28 ENPPINEKMIRAMMMQMGRKPSEKQIKQMMRSM 60 (64)
T ss_pred HCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 346799999999999999999999999999887
No 129
>PRK00523 hypothetical protein; Provisional
Probab=87.86 E-value=1.3 Score=28.73 Aligned_cols=34 Identities=12% Similarity=0.134 Sum_probs=30.8
Q ss_pred CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 58 SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 58 ~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
.++..|+++.++..+..+|.+||+..++.+++.+
T Consensus 35 ~~NPpine~mir~M~~QMGqKPSekki~Q~m~~m 68 (72)
T PRK00523 35 RENPPITENMIRAMYMQMGRKPSESQIKQVMRSV 68 (72)
T ss_pred HHCcCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 3457799999999999999999999999999887
No 130
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=87.65 E-value=6.1 Score=26.86 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=41.7
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHH-------hCCC----CCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTN-------LGEK----LTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~-------lg~~----~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
.++.+-+|+.+ .|++|.++..-|...|.. +|+. -.+..++..|.... ....|+-++|+..+..
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--LSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--CCCccCHHHHHHHHHh
Confidence 35778899988 788999999998888775 3422 25667777777763 4567999999998864
No 131
>KOG0588|consensus
Probab=87.23 E-value=0.55 Score=43.07 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=59.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc---ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN---RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++-|+-+|.++-++.|-+||... +..... .+..|++- ..||.++.+.+-++|.++| +.|..++++ .
T Consensus 192 ~sDVWSCGVILfALLtG~LPFdDd--Nir~LLlKV~~G~f~MP----s~Is~eaQdLLr~ml~VDp---~~RiT~~eI-~ 261 (786)
T KOG0588|consen 192 PSDVWSCGVILFALLTGKLPFDDD--NIRVLLLKVQRGVFEMP----SNISSEAQDLLRRMLDVDP---STRITTEEI-L 261 (786)
T ss_pred ccccchhHHHHHHHHhCCCCCCCc--cHHHHHHHHHcCcccCC----CcCCHHHHHHHHHHhccCc---cccccHHHH-h
Confidence 567899999999999999999843 322222 24467665 3599999999999999988 779999999 9
Q ss_pred cCcccccc
Q psy10243 94 DLGFMINV 101 (201)
Q Consensus 94 ~~~~~~~~ 101 (201)
.|||+...
T Consensus 262 kHP~l~g~ 269 (786)
T KOG0588|consen 262 KHPFLSGY 269 (786)
T ss_pred hCchhhcC
Confidence 99999633
No 132
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.87 E-value=1.6 Score=28.03 Aligned_cols=34 Identities=6% Similarity=0.057 Sum_probs=30.5
Q ss_pred CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 58 SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 58 ~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
.++..|+++.++..+...|.+||+..+++++..+
T Consensus 34 k~NPpine~~iR~M~~qmGqKpSe~kI~Qvm~~i 67 (71)
T COG3763 34 KDNPPINEEMIRMMMAQMGQKPSEKKINQVMRSI 67 (71)
T ss_pred hhCCCCCHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 3457799999999999999999999999998876
No 133
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=86.84 E-value=0.93 Score=36.48 Aligned_cols=79 Identities=15% Similarity=-0.078 Sum_probs=51.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccce-----------------------------eecccCCcCCCCHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVV-----------------------------QSLIASEWYRCSPD 66 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----------------------------f~~~~~~~~~is~~ 66 (201)
..++.|++++-+.-|.+|.+|+...+........... ......-...+|.+
T Consensus 180 ~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (287)
T cd07848 180 KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGV 259 (287)
T ss_pred CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHH
Confidence 3478999999999999999988754321110000000 00000001237888
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+.++|..+| +.|..++++ +.|||+
T Consensus 260 ~~dll~~~L~~~P---~~R~s~~~~-l~hp~f 287 (287)
T cd07848 260 LLDLMKNLLKLNP---TDRYLTEQC-LNHPAF 287 (287)
T ss_pred HHHHHHHHccCCc---ccCCCHHHH-hcCCCC
Confidence 8999999999988 678888888 899885
No 134
>PRK01844 hypothetical protein; Provisional
Probab=85.80 E-value=1.9 Score=27.88 Aligned_cols=34 Identities=9% Similarity=0.094 Sum_probs=30.8
Q ss_pred CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 58 SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 58 ~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
.++..|+++.++..+...|.+||+..++.+++.+
T Consensus 34 k~NPpine~mir~Mm~QMGqkPSekki~Q~m~~m 67 (72)
T PRK01844 34 QKNPPINEQMLKMMMMQMGQKPSQKKINQMMSAM 67 (72)
T ss_pred HHCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 3456799999999999999999999999999887
No 135
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=84.96 E-value=1.3 Score=35.56 Aligned_cols=92 Identities=9% Similarity=0.040 Sum_probs=59.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++.+.-+..|.+|+................. ....-...++.+....+.+++..+| +.|..+.++ .+|
T Consensus 187 ~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~l-~~~ 262 (286)
T cd06622 187 QSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIP---NRRPTYAQL-LEH 262 (286)
T ss_pred ccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCc---ccCCCHHHH-hcC
Confidence 46889999999999999998854322111101111110 0111112378888899999998877 557778888 889
Q ss_pred ccccccccccccHHHHH
Q psy10243 96 GFMINVLRFSLTFVNFV 112 (201)
Q Consensus 96 ~~~~~~~~g~i~f~eF~ 112 (201)
+|+........+..+++
T Consensus 263 ~~~~~~~~~~~~~~~~~ 279 (286)
T cd06622 263 PWLVKYKNADVDMAEWV 279 (286)
T ss_pred hhhhhccCCccchHHHH
Confidence 99977666666656655
No 136
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=84.88 E-value=1.6 Score=35.32 Aligned_cols=88 Identities=11% Similarity=-0.017 Sum_probs=55.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc-ceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR-VVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++-|++++-++-|..|.+|+............. .+......-...+|.+....+.++|..+| +.|. .++
T Consensus 180 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P---~~R~~~~~~~~~ 256 (285)
T cd05631 180 FSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNP---KERLGCRGNGAA 256 (285)
T ss_pred cccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCH---HHhcCCCCCCHH
Confidence 34688999999999999999987544321111111 11111111123488889999999999877 4454 377
Q ss_pred HHhccCccccccccccccHHHHH
Q psy10243 90 LVRLDLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 90 ~~d~~~~~~~~~~~g~i~f~eF~ 112 (201)
++ ..|+|+. .+++..+.
T Consensus 257 ~~-~~h~~~~-----~~~~~~~~ 273 (285)
T cd05631 257 GV-KQHPIFK-----NINFKRLE 273 (285)
T ss_pred HH-hcCHhhc-----CCCHHHHH
Confidence 88 8999983 35555444
No 137
>KOG0598|consensus
Probab=84.50 E-value=1.7 Score=36.93 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=59.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHH--HHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHL--RFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~--~~~~~~~d~ 93 (201)
...+=|++++-++=|++|.+||+.+..+... .+.+..-.......+|.++.+.+-+.|..+|+. .+ ..-..++ .
T Consensus 204 ~~vDWWsLGillYeML~G~pPF~~~~~~~~~--~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~-RLg~~~d~~~i-k 279 (357)
T KOG0598|consen 204 KAVDWWSLGILLYEMLTGKPPFYAEDVKKMY--DKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQ-RLGGPGDAEEI-K 279 (357)
T ss_pred cccchHhHHHHHHHHhhCCCCCcCccHHHHH--HHHhcCcCCCCCccCCHHHHHHHHHHhccCHHH-hcCCCCChHHh-h
Confidence 4567899999999999999999976654322 222222212222449999999999999987722 22 1334455 6
Q ss_pred cCccccccccccccHHHHH
Q psy10243 94 DLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 94 ~~~~~~~~~~g~i~f~eF~ 112 (201)
.|+++ ..|+|+.-.
T Consensus 280 ~HpfF-----~~inW~~l~ 293 (357)
T KOG0598|consen 280 RHPFF-----KGINWEKLL 293 (357)
T ss_pred cCccc-----ccCCHHHHH
Confidence 78877 667777654
No 138
>KOG0616|consensus
Probab=83.86 E-value=0.68 Score=38.60 Aligned_cols=86 Identities=8% Similarity=0.054 Sum_probs=54.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhH--HHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGH--LRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~--~~~~~~~~d~ 93 (201)
..+=|+++|=.+=|.|||+||.....- ..-.+.+- .+-.-.. .|.+.++.+-+.|.++.|..- +..=...+ .
T Consensus 221 avDWWalGVLIYEMlaG~pPF~~~~~~--~iY~KI~~--~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dI-k 295 (355)
T KOG0616|consen 221 AVDWWALGVLIYEMLAGYPPFYDDNPI--QIYEKILE--GKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDI-K 295 (355)
T ss_pred chhHHHHHHHHHHHHcCCCCCcCCChH--HHHHHHHh--CcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCcccc-c
Confidence 346799999999999999999965541 11111111 1111233 999999999999988664411 11123344 6
Q ss_pred cCccccccccccccHHHHH
Q psy10243 94 DLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 94 ~~~~~~~~~~g~i~f~eF~ 112 (201)
+|+|+ ..+++.+-.
T Consensus 296 ~H~wF-----~~v~W~~i~ 309 (355)
T KOG0616|consen 296 NHPWF-----KGVDWEAIL 309 (355)
T ss_pred cCccc-----ccccHHHHh
Confidence 78999 567776654
No 139
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=83.81 E-value=2.3 Score=34.27 Aligned_cols=80 Identities=13% Similarity=-0.000 Sum_probs=52.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
+-++-|++++-+.-+..|..|+.....+......+........-...++.+....+.++|..+| ..|. .+++
T Consensus 175 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~~~~~~ 251 (279)
T cd05633 175 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDV---SKRLGCLGRGAQE 251 (279)
T ss_pred chhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCH---HHhcCCCCCCHHH
Confidence 3468899999999999999998654332211111111111111123488899999999999987 4454 5788
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ .+|+|+.
T Consensus 252 ~-~~h~~~~ 259 (279)
T cd05633 252 V-KEHVFFK 259 (279)
T ss_pred H-HhCcccc
Confidence 8 8999994
No 140
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=83.07 E-value=2 Score=34.59 Aligned_cols=79 Identities=9% Similarity=0.056 Sum_probs=52.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc-ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN-RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
-++.|++++-++.|..|..|+........... ...+......-...++.+....+.++|..+| +.|. ++.+
T Consensus 177 ~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~~~~~ 253 (280)
T cd05608 177 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDP---EKRLGFRDGNCDG 253 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCH---HHhcCCCCCCHHH
Confidence 47889999999999999999876543322111 1111111111123488888999999998877 4455 6788
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ .+|+|+.
T Consensus 254 ~-l~h~~~~ 261 (280)
T cd05608 254 L-RTHPLFR 261 (280)
T ss_pred H-hcChhhh
Confidence 8 8899984
No 141
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=82.96 E-value=1.1 Score=37.07 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=55.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
..++.|++++-+.-|..|..|+............ +.+......-...++.+....+.++|..+| +.|. .++
T Consensus 186 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~R~~~~~~~~~ 262 (332)
T cd05614 186 KAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDP---KKRLGAGPQGAS 262 (332)
T ss_pred CccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCH---HHcCCCCCCCHH
Confidence 3578999999999999999998765443322111 112222222223488999999999999977 4455 778
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ .+|+|+.
T Consensus 263 ~~-l~h~~~~ 271 (332)
T cd05614 263 EI-KEHPFFK 271 (332)
T ss_pred HH-HcCCCcC
Confidence 88 8999994
No 142
>KOG0575|consensus
Probab=82.84 E-value=0.74 Score=41.52 Aligned_cols=78 Identities=15% Similarity=0.050 Sum_probs=57.3
Q ss_pred cCCcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 14 HLPITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
|=--.+.|+++.-+..+++|-|||...+-+..- .++.-+-+.-+ ..+|.++.+.+-+.|..+| ..|..+.++ +
T Consensus 195 HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety--~~Ik~~~Y~~P-~~ls~~A~dLI~~lL~~~P---~~Rpsl~~v-L 267 (592)
T KOG0575|consen 195 HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY--NKIKLNEYSMP-SHLSAEAKDLIRKLLRPNP---SERPSLDEV-L 267 (592)
T ss_pred CCCchhhhhhhhHHHhhhhCCCCcccchHHHHH--HHHHhcCcccc-cccCHHHHHHHHHHhcCCc---ccCCCHHHH-h
Confidence 334468899999999999999999865444332 12212222221 2599999999999999988 558889999 8
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
+|+|+
T Consensus 268 ~h~Ff 272 (592)
T KOG0575|consen 268 DHPFF 272 (592)
T ss_pred cCHhh
Confidence 99888
No 143
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=82.68 E-value=2.2 Score=34.12 Aligned_cols=80 Identities=8% Similarity=-0.087 Sum_probs=52.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccc-cccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-HHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLD-DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-MCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-~~~~~d~ 93 (201)
+.++.|++++-++-|..|..|+........ .................+|.....++.++|..+| +.|. .++++ +
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~~~-l 260 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNI---NYRLTNYNEI-I 260 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccCh---hhCCchHHHH-h
Confidence 447899999999999999999874332211 1111111111112223589999999999999877 5565 46888 8
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|+|+.
T Consensus 261 ~h~~~~ 266 (267)
T PHA03390 261 KHPFLK 266 (267)
T ss_pred cCCccc
Confidence 999984
No 144
>KOG1265|consensus
Probab=82.42 E-value=22 Score=34.15 Aligned_cols=66 Identities=14% Similarity=0.238 Sum_probs=55.6
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHh----------CCCCCHHHHHHHHHhhCCCC----CCcccHHHHHHHHhc
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNL----------GEKLTEEEVDAMIAVADQEG----LGYIRYEDFVQVMLR 200 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l----------g~~~s~~ei~~i~~~~d~~~----~g~I~~~eF~~~l~~ 200 (201)
..++.++|..+--++.-++|.++|..++..- -..+++..+..++..+..++ .|.++-+-|+..+..
T Consensus 220 R~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 220 RPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred chhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 5678899999988888999999999999762 24568899999999998764 689999999988764
No 145
>KOG0038|consensus
Probab=81.76 E-value=2.1 Score=31.87 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=47.1
Q ss_pred CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCC-HHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT-EEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 131 ~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s-~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
..+...++-++|. .+|.|.+|.+++..++.-+....+ +-.+...|+-+|.|+|+.|--.+....+.
T Consensus 69 enpfk~ri~e~FS---eDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~ 135 (189)
T KOG0038|consen 69 ENPFKRRICEVFS---EDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLT 135 (189)
T ss_pred cChHHHHHHHHhc---cCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHH
Confidence 3344555555555 799999999999999887654332 33456678889999999887777666554
No 146
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=81.31 E-value=2.1 Score=34.18 Aligned_cols=82 Identities=12% Similarity=-0.069 Sum_probs=52.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+..|.+|.+|+.............. ..........++.+....+.+++..+| +-|..++++ ..|
T Consensus 177 ~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~p---~~Rpt~~~i-l~~ 251 (274)
T cd06609 177 EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK-NNPPSLEGNKFSKPFKDFVSLCLNKDP---KERPSAKEL-LKH 251 (274)
T ss_pred chhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh-cCCCCCcccccCHHHHHHHHHHhhCCh---hhCcCHHHH-hhC
Confidence 357899999999999999999864321110000000 001111112277888888888998876 567888999 899
Q ss_pred ccccccc
Q psy10243 96 GFMINVL 102 (201)
Q Consensus 96 ~~~~~~~ 102 (201)
+|+.+..
T Consensus 252 ~~~~~~~ 258 (274)
T cd06609 252 KFIKKAK 258 (274)
T ss_pred hhhcCCC
Confidence 9997643
No 147
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=81.05 E-value=1.9 Score=34.14 Aligned_cols=76 Identities=12% Similarity=-0.059 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecc-cCC-cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLI-ASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~-~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
-++.|++++-+..+..|.+|+......... .+...... ... ....+.+..+.+.++|..+| +.|..+.++ ..
T Consensus 198 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rpt~~~l-l~ 271 (275)
T cd06608 198 RSDVWSLGITAIELADGKPPLCDMHPMRAL--FKIPRNPPPTLKSPENWSKKFNDFISECLIKNY---EQRPFMEEL-LE 271 (275)
T ss_pred cccHHHhHHHHHHHHhCCCCccccchHHHH--HHhhccCCCCCCchhhcCHHHHHHHHHHhhcCh---hhCcCHHHH-hc
Confidence 378999999999999999998643211110 11000000 000 11256677788888888877 667788888 77
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
|+|+
T Consensus 272 ~~~~ 275 (275)
T cd06608 272 HPFI 275 (275)
T ss_pred CCCC
Confidence 8774
No 148
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=80.90 E-value=2.2 Score=33.74 Aligned_cols=79 Identities=14% Similarity=-0.017 Sum_probs=49.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+.-+..|.+|+.....................-...++.+...++.+++..+| +.|..+.++ ..|
T Consensus 187 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rp~~~~~-l~~ 262 (265)
T cd06631 187 RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQ---HERPSALQL-LRH 262 (265)
T ss_pred chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCc---ccCCCHHHH-hcC
Confidence 5588999999999999999998642211111000000001111123478888999999998877 556777888 777
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 263 ~~~ 265 (265)
T cd06631 263 DFL 265 (265)
T ss_pred CCC
Confidence 764
No 149
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=80.65 E-value=1.2 Score=36.13 Aligned_cols=79 Identities=11% Similarity=-0.019 Sum_probs=51.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccc------------------cccceeeccc---------CCcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDC------------------NRRVVQSLIA---------SEWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------------~~~~~f~~~~---------~~~~~is~~~~ 68 (201)
..++.|++++-+.-|.+|.+|+...+...... ....+....- .....++.+..
T Consensus 183 ~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T cd07871 183 TPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGI 262 (288)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHH
Confidence 34789999999999999999886543211000 0000000000 01234788999
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.+.++|..+| ..|..+.++ ++|+|+
T Consensus 263 dll~~mL~~dp---~~R~t~~~~-l~hp~f 288 (288)
T cd07871 263 DLLSSLLLYET---KSRISAEAA-LRHSYF 288 (288)
T ss_pred HHHHHhcCcCc---ccCCCHHHH-hcCCCC
Confidence 99999999877 558888898 899885
No 150
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=80.64 E-value=3.3 Score=33.16 Aligned_cols=79 Identities=11% Similarity=0.086 Sum_probs=51.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc-ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN-RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
-++.|++++.+.-|.+|.+|+........... .+........-...++.+....+.++|..+| +.|. .+.+
T Consensus 174 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~~~~~~ 250 (277)
T cd05577 174 SVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP---EKRLGCRGGSADE 250 (277)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh---hHccCCCcccHHH
Confidence 46889999999999999999865433211111 1112222222223478889999999998876 3455 6777
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 251 l-l~h~~~~ 258 (277)
T cd05577 251 V-REHPLFK 258 (277)
T ss_pred H-HhChhhh
Confidence 7 7898883
No 151
>KOG0585|consensus
Probab=80.22 E-value=1.7 Score=38.54 Aligned_cols=81 Identities=9% Similarity=-0.054 Sum_probs=58.5
Q ss_pred hhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcc
Q psy10243 19 QRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGF 97 (201)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~ 97 (201)
+-|+++|+++-+..|=+||-.+.+-.. ..+.+-+-..-+ ...++.+.++.+.++|.++| +.|.++.++ ..|+|
T Consensus 301 DiWalGVTLYCllfG~~PF~~~~~~~l--~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP---~~Ri~l~~i-k~Hpw 374 (576)
T KOG0585|consen 301 DIWALGVTLYCLLFGQLPFFDDFELEL--FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDP---EQRITLPDI-KLHPW 374 (576)
T ss_pred hhhhhhhhHHHhhhccCCcccchHHHH--HHHHhcCcccCCCcccccHHHHHHHHHHhhcCh---hheeehhhh-eecce
Confidence 569999999999999999987665321 111211111111 12489999999999999988 789999999 89999
Q ss_pred cccccccc
Q psy10243 98 MINVLRFS 105 (201)
Q Consensus 98 ~~~~~~g~ 105 (201)
+...+++.
T Consensus 375 vt~~g~~~ 382 (576)
T KOG0585|consen 375 VTRDGDSP 382 (576)
T ss_pred eccCCCCC
Confidence 97665443
No 152
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=80.08 E-value=3.1 Score=33.89 Aligned_cols=80 Identities=16% Similarity=-0.076 Sum_probs=52.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc-CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA-SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+-++.|++++.+..+..|.+|+......... .......... .....++....+.+.+++..+| +.|..+.++ ..
T Consensus 194 ~~~Di~slGvil~~l~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~~i-l~ 268 (297)
T cd06656 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATNGTPELQNPERLSAVFRDFLNRCLEMDV---DRRGSAKEL-LQ 268 (297)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCcchhe-eeeccCCCCCCCCccccCHHHHHHHHHHccCCh---hhCcCHHHH-hc
Confidence 4578899999999999999998653321110 0000000000 0113377888889999999877 568889999 89
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|+|+..
T Consensus 269 ~~~~~~ 274 (297)
T cd06656 269 HPFLKL 274 (297)
T ss_pred Cchhcc
Confidence 999853
No 153
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=80.03 E-value=2.4 Score=34.03 Aligned_cols=81 Identities=11% Similarity=-0.066 Sum_probs=53.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-+.-|..|.+|+...+...............-.....++.+..+.+.+++..+| +-|..+.++ ..|+
T Consensus 188 ~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~~~ 263 (282)
T cd06643 188 KADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNV---DARWTTTQL-LQHP 263 (282)
T ss_pred cchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCCh---hhCcCHHHH-hcCC
Confidence 588999999999898898887654322111111000000001123478889999999999987 668888888 8999
Q ss_pred ccccc
Q psy10243 97 FMINV 101 (201)
Q Consensus 97 ~~~~~ 101 (201)
|+...
T Consensus 264 ~~~~~ 268 (282)
T cd06643 264 FVTVN 268 (282)
T ss_pred CEecc
Confidence 98654
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=79.56 E-value=0.78 Score=40.08 Aligned_cols=82 Identities=11% Similarity=-0.041 Sum_probs=54.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cc--------e---------eeccc---CC-----cCCCCHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RV--------V---------QSLIA---SE-----WYRCSPDTRR 69 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~--------~---------f~~~~---~~-----~~~is~~~~~ 69 (201)
+.++.|++++.+.-|.+|++|+...+........ +. + ..+.. .+ ....+.+..+
T Consensus 250 ~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~ 329 (440)
T PTZ00036 250 THIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAIN 329 (440)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHH
Confidence 3478999999999999999999764421110000 00 0 00000 00 0236788999
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
++.++|..+| ..|..+.++ +.|+|+...
T Consensus 330 li~~~L~~dP---~~R~ta~e~-l~hp~f~~~ 357 (440)
T PTZ00036 330 FISQFLKYEP---LKRLNPIEA-LADPFFDDL 357 (440)
T ss_pred HHHHHCCCCh---hHCcCHHHH-hCChhHHhh
Confidence 9999999988 678899999 999998644
No 155
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=79.10 E-value=2.4 Score=33.88 Aligned_cols=78 Identities=13% Similarity=-0.049 Sum_probs=50.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc---------------------cccc-----eeecccCCcCCCCHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC---------------------NRRV-----VQSLIASEWYRCSPDTRRC 70 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------------~~~~-----~f~~~~~~~~~is~~~~~~ 70 (201)
.++.|++++-+.-|.+|.+|+.......... ..+. ...........++.+..+.
T Consensus 182 ~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (285)
T cd07861 182 PVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDL 261 (285)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHH
Confidence 4789999999999999988886443211000 0000 0001111123488999999
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.++|..+| ..|..++++ ..|+|+
T Consensus 262 i~~~l~~dP---~~Rpt~~~l-l~~~~~ 285 (285)
T cd07861 262 LEKMLIYDP---AKRISAKKA-LNHPYF 285 (285)
T ss_pred HHHHhcCCh---hhCCCHHHH-hcCCCC
Confidence 999999987 667888888 888875
No 156
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=78.92 E-value=2.8 Score=33.49 Aligned_cols=78 Identities=12% Similarity=-0.076 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc---------------------cccc-e----eecccCCcCCCCHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC---------------------NRRV-V----QSLIASEWYRCSPDTRRC 70 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------------~~~~-~----f~~~~~~~~~is~~~~~~ 70 (201)
-++.|++++-+..|.+|.+|+...+...... .... + ..........++.+..+.
T Consensus 180 ~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 259 (283)
T cd07835 180 PVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDL 259 (283)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHH
Confidence 4788999999999999999875432210000 0000 0 000011123477888899
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.+++..+| +.|..+.++ ..|+|+
T Consensus 260 i~~~l~~~P---~~Rpt~~~i-l~~~~~ 283 (283)
T cd07835 260 LSKMLVYDP---AKRISAKAA-LQHPYF 283 (283)
T ss_pred HHHHhcCCh---hhCcCHHHH-hcCCCC
Confidence 999999877 567778888 788775
No 157
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=78.74 E-value=3.6 Score=33.05 Aligned_cols=82 Identities=15% Similarity=0.068 Sum_probs=54.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc---cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d 92 (201)
+.++.|++++-+.-+..|.+|+............ .....+....+..++.+..+++.+++..+| +-|..+.++
T Consensus 189 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~~i- 264 (288)
T cd06616 189 VRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDE---SKRPKYKEL- 264 (288)
T ss_pred chhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCCh---hhCcCHHHH-
Confidence 3578899999999999999998654311000000 000111222223488899999999999987 668888999
Q ss_pred ccCcccccc
Q psy10243 93 LDLGFMINV 101 (201)
Q Consensus 93 ~~~~~~~~~ 101 (201)
..|+|+...
T Consensus 265 ~~~~~~~~~ 273 (288)
T cd06616 265 LEHPFIKDY 273 (288)
T ss_pred hcChhhhch
Confidence 899988543
No 158
>KOG1029|consensus
Probab=78.41 E-value=6.9 Score=36.73 Aligned_cols=57 Identities=23% Similarity=0.354 Sum_probs=47.1
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
...|..+ +-+.|+|+...-+..+-..| ++...+.+|+...|.|+||+++..||--.|
T Consensus 19 ~~qF~~L-kp~~gfitg~qArnfflqS~--LP~~VLaqIWALsDldkDGrmdi~EfSIAm 75 (1118)
T KOG1029|consen 19 DAQFGQL-KPGQGFITGDQARNFFLQSG--LPTPVLAQIWALSDLDKDGRMDIREFSIAM 75 (1118)
T ss_pred HHHHhcc-CCCCCccchHhhhhhHHhcC--CChHHHHHHHHhhhcCccccchHHHHHHHH
Confidence 3445555 35689999999999998877 667789999999999999999999997554
No 159
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=77.83 E-value=3.3 Score=34.70 Aligned_cols=80 Identities=10% Similarity=0.051 Sum_probs=53.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccce-eecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVV-QSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
.++.|++++-++-|.+|-.|+............... ..........++.+...++.++|..+| +.|..+.++ +.|
T Consensus 253 ~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P---~~Rpt~~el-l~h 328 (353)
T PLN00034 253 AGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREP---AKRWSAMQL-LQH 328 (353)
T ss_pred chhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCCh---hhCcCHHHH-hcC
Confidence 478999999999999999888733222111111111 111111123478888999999999877 668889999 999
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 329 p~~~~ 333 (353)
T PLN00034 329 PFILR 333 (353)
T ss_pred ccccc
Confidence 99954
No 160
>KOG0035|consensus
Probab=77.30 E-value=8.4 Score=36.75 Aligned_cols=93 Identities=15% Similarity=0.077 Sum_probs=64.9
Q ss_pred cceeecccCCcCC-CCHHHHHHHHHHhCCCCChh-----HHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhh
Q psy10243 50 RVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPG-----HLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMY 123 (201)
Q Consensus 50 ~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~-----~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~ 123 (201)
+.+|.-.+....+ .+++++...+..+|.+.-++ +...+++..|... .|.++|.+|...+
T Consensus 750 rAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~-------~~qv~~~e~~ddl-------- 814 (890)
T KOG0035|consen 750 RALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLI-------QGQVQLLEFEDDL-------- 814 (890)
T ss_pred HHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCccc-------ccceeHHHHHhHh--------
Confidence 4445555554455 99999999999999976431 2334444444443 4788999998665
Q ss_pred hhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHH
Q psy10243 124 NTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRH 160 (201)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~ 160 (201)
.+.........++..+|+.+-+++. +|..+||..
T Consensus 815 --~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 815 --EREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred --hhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 3444455668888999999977766 899999887
No 161
>KOG0581|consensus
Probab=77.28 E-value=2.1 Score=36.42 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=65.4
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccccccccc-----eeecccCCcC-CCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-----VQSLIASEWY-RCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~f~~~~~~~~-~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
++-|++++-++=+..|..|+....+ .....-. +.+.-..--. ..|++...++-.+|.++| ..|....++
T Consensus 258 sDIWSLGLsllE~a~GrfP~~~~~~--~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp---~~R~s~~qL 332 (364)
T KOG0581|consen 258 SDIWSLGLSLLELAIGRFPYPPPNP--PYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDP---SERPSAKQL 332 (364)
T ss_pred cceecccHHHHHHhhCCCCCCCcCC--CCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCc---ccCCCHHHH
Confidence 6779999999999999887775411 1111111 1211111112 488999999999999988 558888999
Q ss_pred hccCccccccccccccHHHHHHHH
Q psy10243 92 RLDLGFMINVLRFSLTFVNFVMIT 115 (201)
Q Consensus 92 d~~~~~~~~~~~g~i~f~eF~~~~ 115 (201)
..|||+.+.....++...|+.-.
T Consensus 333 -l~Hpfi~~~~~~~vd~~~~~~~~ 355 (364)
T KOG0581|consen 333 -LQHPFIKKFEDPNVDMASFVRKA 355 (364)
T ss_pred -hcCHHHhhcccccccHHHHHHHh
Confidence 99999998888888888877543
No 162
>PLN02222 phosphoinositide phospholipase C 2
Probab=77.05 E-value=10 Score=34.67 Aligned_cols=66 Identities=18% Similarity=0.396 Sum_probs=51.5
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCC--CCCHHHHHHHHHhhCC-CCCCcccHHHHHHHHhc
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGE--KLTEEEVDAMIAVADQ-EGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~--~~s~~ei~~i~~~~d~-~~~g~I~~~eF~~~l~~ 200 (201)
....++..+|..+-. ++.++.++|...|..... ..+.+.+..++..+.. ...+.++++.|..+|.+
T Consensus 22 ~~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 22 EAPREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred CCcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 456689999998853 479999999999988753 3578888999988642 24567999999998864
No 163
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=76.99 E-value=2.8 Score=33.76 Aligned_cols=77 Identities=12% Similarity=-0.057 Sum_probs=49.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc--cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR--RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
..++.|++++-+.-|..|.+|+............ ........ ...++.+....+.+++..+| +.|..+.++ .
T Consensus 212 ~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p---~~Rps~~~i-l 285 (291)
T cd06639 212 ARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH--PEKWCRSFNHFISQCLIKDF---EARPSVTHL-L 285 (291)
T ss_pred CccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCc--ccccCHHHHHHHHHHhhcCh---hhCcCHHHH-h
Confidence 4578899999999999999887643221110000 00011111 12356677888888998877 668888888 8
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 286 ~~~~~ 290 (291)
T cd06639 286 EHPFI 290 (291)
T ss_pred cCccc
Confidence 88887
No 164
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=76.57 E-value=3 Score=32.89 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=51.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc--cccceeecc--cCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHh
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC--NRRVVQSLI--ASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVR 92 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~f~~~--~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d 92 (201)
.++.|++++-+..+.+|..|+.......... ..+...... ......++.+....+.+++..+| +.|..+.++
T Consensus 179 ~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~l- 254 (265)
T cd06605 179 KSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDP---RERPSYKEL- 254 (265)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCc---hhCcCHHHH-
Confidence 4788999999999999998876443211110 001011000 01111267788888888888877 668888888
Q ss_pred ccCcccccc
Q psy10243 93 LDLGFMINV 101 (201)
Q Consensus 93 ~~~~~~~~~ 101 (201)
..++|++.+
T Consensus 255 l~~~~~~~~ 263 (265)
T cd06605 255 LEHPFIKKY 263 (265)
T ss_pred hhCchhhcc
Confidence 899998653
No 165
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=76.44 E-value=4.5 Score=32.63 Aligned_cols=79 Identities=13% Similarity=-0.044 Sum_probs=52.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccc-ceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR-VVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
-++-|++++-+..+..|..|+............. .+......-...++......+.+++..+| ..|. .+.+
T Consensus 181 ~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~~~~~ 257 (285)
T cd05605 181 SPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDP---GFRLGCRGEGAEE 257 (285)
T ss_pred cccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCH---HHhcCCCCCCHHH
Confidence 4678999999999999999987543322111111 11111111123488888889999999977 5566 7788
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 258 l-~~~~~~~ 265 (285)
T cd05605 258 V-KAHPFFR 265 (285)
T ss_pred H-hcCcCcc
Confidence 8 8999993
No 166
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=76.11 E-value=2.9 Score=35.08 Aligned_cols=80 Identities=13% Similarity=-0.082 Sum_probs=51.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChh--HHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPG--HLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~--~~~~~~~~~d~ 93 (201)
+.++.|++++.+.-|..|.+|+........ .+.+..-...-...++.+....+.++|..+|... ..+.+++++ .
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~-~ 282 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLI---YQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNV-K 282 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHH---HHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHH-H
Confidence 457889999999999999999875432211 1111110000113388899999999999876221 112478888 8
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
+|+|+.
T Consensus 283 ~hp~f~ 288 (340)
T PTZ00426 283 EHPWFG 288 (340)
T ss_pred cCCCcC
Confidence 999993
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=75.96 E-value=2.8 Score=33.85 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=50.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccccee-ecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH-----HHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQ-SLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM-----CGL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f-~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~-----~~~ 90 (201)
-++-|++++-++-|..|.+|+..............+. .....-...++.+..+.+.++|..+| +.|.. +.+
T Consensus 181 ~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~s~~~~~~~~ 257 (285)
T cd05630 181 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDP---KERLGCQGGGARE 257 (285)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCH---HHccCCCCCchHH
Confidence 4688999999999999999987543221111111111 11111123478888888888998876 55665 778
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ .+|+|+.
T Consensus 258 ~-~~h~~~~ 265 (285)
T cd05630 258 V-KEHPLFK 265 (285)
T ss_pred H-HcChhhh
Confidence 8 8899883
No 168
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=75.84 E-value=4.2 Score=33.00 Aligned_cols=81 Identities=15% Similarity=-0.109 Sum_probs=50.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+-++.|++++-+.-+..|..|+.................-.-..+..++.+....+.+++..+| +.|..+.++ ..|
T Consensus 194 ~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rp~~~~i-l~h 269 (293)
T cd06647 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDV---EKRGSAKEL-LQH 269 (293)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCCh---hhCcCHHHH-hcC
Confidence 3478899999999999999998654322111000000000011123467778888888988877 557788888 888
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 270 ~~~~~ 274 (293)
T cd06647 270 PFLKI 274 (293)
T ss_pred HHHhc
Confidence 88753
No 169
>PLN02228 Phosphoinositide phospholipase C
Probab=75.61 E-value=14 Score=33.60 Aligned_cols=69 Identities=14% Similarity=0.310 Sum_probs=52.9
Q ss_pred CCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC-C-CCCHHHHHHHHHhhCCC----CCCcccHHHHHHHHhc
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-E-KLTEEEVDAMIAVADQE----GLGYIRYEDFVQVMLR 200 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg-~-~~s~~ei~~i~~~~d~~----~~g~I~~~eF~~~l~~ 200 (201)
.......++..+|..+-. ++.++.++|...|.... . ..+.+.+..++..+... ..|.++.+.|..+|.+
T Consensus 18 ~~~~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 18 KTREPPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CCCCCcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 334567889999998853 36899999999998874 2 35667789999988643 3467999999998864
No 170
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=75.45 E-value=10 Score=24.33 Aligned_cols=33 Identities=15% Similarity=0.359 Sum_probs=23.5
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCC
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAVADQEG 185 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~ 185 (201)
++.+++..++...|..+|.+++..+++.-+..+
T Consensus 14 l~d~~m~~if~l~~~~vs~~el~a~lrke~~~~ 46 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEVSKAELSAWLRKEDEKG 46 (68)
T ss_pred CChHHHHHHHHHcCCccCHHHHHHHHCCCCCcc
Confidence 445677777777788888888888887755433
No 171
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=75.40 E-value=4.3 Score=31.73 Aligned_cols=77 Identities=13% Similarity=-0.047 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+.-|.-|.+|+.............. ..... .....++.+..+.+.+++..+| +.|..+.++ ..|
T Consensus 179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P---~~Rps~~~i-l~~ 253 (256)
T cd06612 179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTL-SDPEKWSPEFNDFVKKCLVKDP---EERPSAIQL-LQH 253 (256)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCC-CchhhcCHHHHHHHHHHHhcCh---hhCcCHHHH-hcC
Confidence 36889999888888889888764322111100000 00000 0112367788888888998877 557888888 778
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 254 ~~~ 256 (256)
T cd06612 254 PFI 256 (256)
T ss_pred CCC
Confidence 774
No 172
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=75.34 E-value=3.9 Score=33.27 Aligned_cols=80 Identities=15% Similarity=-0.089 Sum_probs=51.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc-CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA-SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++.|++++-++-|..|++|+........... ........ .....++......+.+++..+| +.|..+.++ ..
T Consensus 195 ~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~ei-l~ 269 (296)
T cd06654 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDV---EKRGSAKEL-LQ 269 (296)
T ss_pred ccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH-HhcCCCCCCCCccccCHHHHHHHHHHCcCCc---ccCcCHHHH-hh
Confidence 457899999999999999999865432111000 00000000 1123478888888999998877 557888888 88
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
++|+..
T Consensus 270 ~~~~~~ 275 (296)
T cd06654 270 HQFLKI 275 (296)
T ss_pred Chhhhc
Confidence 888753
No 173
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=75.10 E-value=2.7 Score=35.38 Aligned_cols=82 Identities=10% Similarity=-0.066 Sum_probs=50.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++.|++++-++-|..|.+|+.............. .....-.++..+|.+..+.+.+.+.. +.+...+..+.++ +.
T Consensus 215 ~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~-~~~r~~r~~~~ei-~~ 292 (363)
T cd05628 215 KLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCE-WEHRIGAPGVEEI-KT 292 (363)
T ss_pred CchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCC-hhhcCCCCCHHHH-hC
Confidence 357899999999999999999975443211111100 01111222345899999999887642 2111123467788 89
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
|+|+.
T Consensus 293 hp~f~ 297 (363)
T cd05628 293 NPFFE 297 (363)
T ss_pred CCCCC
Confidence 99993
No 174
>KOG0998|consensus
Probab=74.88 E-value=1.2 Score=42.46 Aligned_cols=64 Identities=25% Similarity=0.458 Sum_probs=55.6
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
........+|...|.+.+|.|+..+.+..+...| ++...+..++...|..+.|.+++.+|.-.+
T Consensus 280 ~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g--l~~~~l~~~w~l~d~~n~~~ls~~ef~~~~ 343 (847)
T KOG0998|consen 280 SDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFG--LSKPRLAHVWLLADTQNTGTLSKDEFALAM 343 (847)
T ss_pred HHHHHHHHHHHhccccCCCcccccccccccccCC--CChhhhhhhhhhcchhccCcccccccchhh
Confidence 4466777899999999999999999999998744 788899999999999999999999886543
No 175
>PLN02230 phosphoinositide phospholipase C 4
Probab=74.79 E-value=14 Score=33.93 Aligned_cols=70 Identities=11% Similarity=0.228 Sum_probs=52.1
Q ss_pred CCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhC-C--CCCHHHHHHHHHhhCC-------CCCCcccHHHHHHHHh
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-E--KLTEEEVDAMIAVADQ-------EGLGYIRYEDFVQVML 199 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg-~--~~s~~ei~~i~~~~d~-------~~~g~I~~~eF~~~l~ 199 (201)
.......+++.+|..+-.++ ++++.++|.+.|.... . ..+.+++..++..+-. -+.+.++.+.|..+|.
T Consensus 23 ~~~~p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~ 101 (598)
T PLN02230 23 TESGPVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLF 101 (598)
T ss_pred ccCCCcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHc
Confidence 34456789999999995444 8999999999999875 2 3467778888865421 1345699999999886
Q ss_pred c
Q psy10243 200 R 200 (201)
Q Consensus 200 ~ 200 (201)
+
T Consensus 102 s 102 (598)
T PLN02230 102 S 102 (598)
T ss_pred C
Confidence 5
No 176
>PTZ00284 protein kinase; Provisional
Probab=74.44 E-value=1.3 Score=38.86 Aligned_cols=32 Identities=6% Similarity=0.006 Sum_probs=25.9
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 66 DTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 66 ~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
...+++.++|..+| +.|..+.++ +.|+|+.+.
T Consensus 413 ~~~dli~~mL~~dP---~~R~ta~e~-L~Hp~~~~~ 444 (467)
T PTZ00284 413 LLCDLIYGLLHYDR---QKRLNARQM-TTHPYVLKY 444 (467)
T ss_pred HHHHHHHHhCCcCh---hhCCCHHHH-hcCcccccc
Confidence 34577888888887 679999999 999999654
No 177
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=74.40 E-value=5 Score=31.77 Aligned_cols=79 Identities=9% Similarity=-0.021 Sum_probs=47.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+-++.|++++-+.-+..|..|+.....................-...++.+....+.+++..+| .-|..+.++ ..|
T Consensus 190 ~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~l-l~~ 265 (268)
T cd06624 190 APADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDP---DKRASAHDL-LQD 265 (268)
T ss_pred chhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCc---hhCCCHHHH-HhC
Confidence 3468899988888888999887532111101001111111111112377788888888888876 456788888 778
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 266 ~~~ 268 (268)
T cd06624 266 PFL 268 (268)
T ss_pred CCC
Confidence 774
No 178
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=74.03 E-value=2.5 Score=33.87 Aligned_cols=79 Identities=14% Similarity=-0.080 Sum_probs=49.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccccee-----------------ecc-------cCCcCCCCHHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQ-----------------SLI-------ASEWYRCSPDTRRCL 71 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f-----------------~~~-------~~~~~~is~~~~~~i 71 (201)
+.++.|++++-+.-|.+|.+++................ .+. ..-...++.+..+.+
T Consensus 186 ~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 265 (288)
T cd07863 186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLL 265 (288)
T ss_pred CcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHH
Confidence 45789999998888889988875433211000000000 000 001123677888899
Q ss_pred HHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 72 LMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 72 l~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.++|..+| +.|..+.++ ..|+|+
T Consensus 266 ~~~L~~dP---~~R~t~~~~-l~hp~f 288 (288)
T cd07863 266 LEMLTFNP---HKRISAFRA-LQHPFF 288 (288)
T ss_pred HHHhccCc---ccCCCHHHH-hcCCCC
Confidence 99999887 567888888 888875
No 179
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=73.92 E-value=3.8 Score=32.88 Aligned_cols=79 Identities=11% Similarity=0.061 Sum_probs=49.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc--ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH----HH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN--RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC----GL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~----~~ 90 (201)
-++.|++++-++-|.+|.+|+....+...... .+.+..........++.+..+.+.++|..+| +.|..+ .+
T Consensus 174 ~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P---~~R~~~~~~~~~ 250 (277)
T cd05607 174 PVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKP---EDRLGSREKNDD 250 (277)
T ss_pred chhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCH---hhCCCCccchhh
Confidence 46889999999999999999865433221111 1111111111223488999999999999877 334433 55
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
. ..|+|+.
T Consensus 251 ~-~~h~~f~ 258 (277)
T cd05607 251 P-RKHEFFK 258 (277)
T ss_pred h-hcChhhc
Confidence 5 6889883
No 180
>KOG3449|consensus
Probab=73.91 E-value=12 Score=26.34 Aligned_cols=44 Identities=9% Similarity=0.382 Sum_probs=38.5
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
..+|-+++..++-..+..+++.+|..+|..+.++.++.+++.+.
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~ 47 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELK 47 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhc
Confidence 34666777778888999999999999999999999999999985
No 181
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=73.87 E-value=5.6 Score=32.25 Aligned_cols=80 Identities=9% Similarity=-0.078 Sum_probs=52.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc------------c--------ccceeecc-------cCCcCCCCHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC------------N--------RRVVQSLI-------ASEWYRCSPDTRR 69 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------~--------~~~~f~~~-------~~~~~~is~~~~~ 69 (201)
.++.|++++-++-|..|.+|+...+...... . ....+.+. ..-+..++.+..+
T Consensus 185 ~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (301)
T cd07873 185 QIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAE 264 (301)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHH
Confidence 4689999999999999999886433210000 0 00000000 0011247888889
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
.+.++|..+| ..|..++++ +.|+|+..
T Consensus 265 li~~ml~~dp---~~R~t~~ei-l~h~~f~~ 291 (301)
T cd07873 265 LLSKLLQFEG---RKRISAEEA-MKHPYFHC 291 (301)
T ss_pred HHHHHhcCCc---ccCcCHHHH-hcCccccc
Confidence 9999999987 668889999 99999954
No 182
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=73.86 E-value=4.5 Score=33.52 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHH
Q psy10243 62 RCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVM 113 (201)
Q Consensus 62 ~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~ 113 (201)
..+.+...++.++|..+| +.|..+.++ ..|+|+.......+++..++.
T Consensus 272 ~~~~~l~~li~~~L~~~P---~~Rpt~~el-l~h~~~~~~~~~~~~~~~~~~ 319 (331)
T cd06649 272 VFTPDFQEFVNKCLIKNP---AERADLKML-MNHTFIKRSEVEEVDFAGWLC 319 (331)
T ss_pred cccHHHHHHHHHHccCCc---ccCCCHHHH-hcChHHhhcccccccHHHHHH
Confidence 367788889999999988 668899999 899999876666677666653
No 183
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=73.29 E-value=3.5 Score=33.58 Aligned_cols=81 Identities=16% Similarity=-0.080 Sum_probs=52.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+-++-|++++-+.-+..|..|+...................-.....++.+....+.+++..+| +.|..+.++ ..|
T Consensus 194 ~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rpt~~~i-l~~ 269 (296)
T cd06655 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDV---EKRGSAKEL-LQH 269 (296)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcCh---hhCCCHHHH-hhC
Confidence 3478899999999999999998654321111000000000001123478888889999998877 557888888 899
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 270 ~~~~~ 274 (296)
T cd06655 270 PFLKL 274 (296)
T ss_pred hHhhh
Confidence 88853
No 184
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=73.22 E-value=8.3 Score=24.37 Aligned_cols=41 Identities=17% Similarity=0.417 Sum_probs=30.6
Q ss_pred hhhCcCCCcceeHHHHHHHHHH----------hCCCCCHHHHHHHHHhhCC
Q psy10243 143 RVFDKDGDGIINVAELRHVMTN----------LGEKLTEEEVDAMIAVADQ 183 (201)
Q Consensus 143 ~~~D~~~~G~Is~~el~~~l~~----------lg~~~s~~ei~~i~~~~d~ 183 (201)
+.+|+..+.|||.++++++.+. .|..++..-+-+++.+...
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g~~~~V~D~ktgeDiT~~iL~QIi~e~e~ 60 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREGEDFKVVDAKTGEDITRSILLQIILEEES 60 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCCCeEEEEECCCCcccHHHHHHHHHHHHHh
Confidence 4689999999999999999875 2555666666666655543
No 185
>KOG2871|consensus
Probab=73.00 E-value=5.5 Score=34.14 Aligned_cols=46 Identities=24% Similarity=0.438 Sum_probs=37.2
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMI 178 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~ 178 (201)
...+.++++|+.+|+.++|+|+.+-++.++..++..+++...-.++
T Consensus 306 ~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~ 351 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLM 351 (449)
T ss_pred CCCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHh
Confidence 4467899999999999999999999999999988666654443333
No 186
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=72.48 E-value=5.1 Score=31.70 Aligned_cols=77 Identities=10% Similarity=-0.084 Sum_probs=48.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-+.-|..|..|+.............. ..........++.+..+.+.+++..+| .-|..+.++ ..|+
T Consensus 196 ~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~i-l~~~ 270 (272)
T cd06637 196 KSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNH---SQRPTTEQL-MKHP 270 (272)
T ss_pred hhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCCh---hhCCCHHHH-hhCC
Confidence 47899999999999999988853322111100000 000111123477888888889998877 557778888 8888
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 271 ~~ 272 (272)
T cd06637 271 FI 272 (272)
T ss_pred CC
Confidence 75
No 187
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=72.45 E-value=9.6 Score=34.66 Aligned_cols=120 Identities=11% Similarity=0.049 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhh
Q psy10243 66 DTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVF 145 (201)
Q Consensus 66 ~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~ 145 (201)
...+++.++|..+| +.|..+.++ +.|||+.......++..+-...... . ............+......-
T Consensus 425 ~~~dLi~~mL~~dP---~kR~ta~e~-L~Hpff~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~ 493 (566)
T PLN03225 425 AGWELLKSMMRFKG---RQRISAKAA-LAHPYFDREGLLGLSVMQNLRLQLF------R-ATQQDYGEAAAWVVFLMAKS 493 (566)
T ss_pred HHHHHHHHHccCCc---ccCCCHHHH-hCCcCcCCCCccccccccccccccc------h-hhHHHHHHHHHHHHHHHHhc
Confidence 34578888899987 678999999 9999997543322222111111000 0 00000001122333344455
Q ss_pred CcCCCcceeHHHHHHHHHHhCCCCCHHHHH--HHHHhhCCCCCCcccHHHHHHHH
Q psy10243 146 DKDGDGIINVAELRHVMTNLGEKLTEEEVD--AMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 146 D~~~~G~Is~~el~~~l~~lg~~~s~~ei~--~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
+.+.+|-.+..+++.+... + .-...... .+....+.+..|..++.+++.-.
T Consensus 494 ~~~~~~~~~e~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (566)
T PLN03225 494 GTEKEGGFTEAQLQELREK-E-PKKKGSAQRNALASALRLQRKGVKTVARTVDEI 546 (566)
T ss_pred CCCCCCCccHHHHHHhhhh-c-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhhcc
Confidence 6677888999999887654 3 22223332 37777788888888888876543
No 188
>KOG0046|consensus
Probab=72.07 E-value=4.4 Score=36.25 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=45.1
Q ss_pred eeecccCCcCCCCHHHHHHHHHHhCCC---CChhHHHHHHHHHhccCccccccccccccHHHHHHHHHH
Q psy10243 52 VQSLIASEWYRCSPDTRRCLLMTLRQA---QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLS 117 (201)
Q Consensus 52 ~f~~~~~~~~~is~~~~~~il~~L~~~---~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~ 117 (201)
-|.-.+...++++..++..+++..+.. ...++++.++...+.+. +|.++|++|+.+.++
T Consensus 24 kF~~~d~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~-------~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 24 KFNKLDDQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDA-------DGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHhhcCCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCc-------CCccCHHHHHHHHHh
Confidence 354455556669999999999887652 23678888888887777 599999999987654
No 189
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=71.96 E-value=6.2 Score=32.08 Aligned_cols=80 Identities=10% Similarity=0.058 Sum_probs=50.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccc----------------ceeeccc------------CCcC--CCCHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR----------------VVQSLIA------------SEWY--RCSPD 66 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------------~~f~~~~------------~~~~--~is~~ 66 (201)
.++.|++++.++.|..|..|+............. ....+.. ..|. ..+.+
T Consensus 184 ~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (303)
T cd07869 184 CLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNH 263 (303)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChH
Confidence 4689999999999999999986432211000000 0000000 0011 24567
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
..+.+.++|..+| ..|.++.++ ..|+|+.+
T Consensus 264 ~~dli~~mL~~dp---~~R~s~~~~-l~h~~f~~ 293 (303)
T cd07869 264 AEDLASKLLQCFP---KNRLSAQAA-LSHEYFSD 293 (303)
T ss_pred HHHHHHHHhccCc---hhccCHHHH-hcCccccc
Confidence 7788888998877 668899999 99999953
No 190
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=71.83 E-value=9.8 Score=30.54 Aligned_cols=79 Identities=11% Similarity=0.057 Sum_probs=50.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLR-----FMC 88 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~-----~~~ 88 (201)
+.++-|++++-+..+.+|..|+............ +.+.. ..... ..++......+.+++..+| +.| ..+
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p---~~R~~~~~~~~ 262 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDP---KKRLGCGPSDA 262 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCH---HHhcCCCCCCH
Confidence 4578899999999999999988654332221111 11111 11112 2377888888888988876 344 367
Q ss_pred HHHhccCcccc
Q psy10243 89 GLVRLDLGFMI 99 (201)
Q Consensus 89 ~~~d~~~~~~~ 99 (201)
.++ ..|+|+.
T Consensus 263 ~~l-~~~~~~~ 272 (290)
T cd05613 263 DEI-KKHPFFQ 272 (290)
T ss_pred HHH-HcCcccc
Confidence 777 8888884
No 191
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=71.69 E-value=4.3 Score=31.84 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=48.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-++.+..|..|+....... ................++.+....+.+++..+| ..|..+.++ ..|+
T Consensus 181 ~~Dv~slG~i~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~v-l~~~ 254 (256)
T cd08218 181 KSDIWALGCVLYEMCTLKHAFEAGNMKN--LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNP---RDRPSVNSI-LEKN 254 (256)
T ss_pred ccchhHHHHHHHHHHcCCCCccCCCHHH--HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCCh---hhCcCHHHH-hhCc
Confidence 4688999999999999998876432111 111111111111223478888889999998876 567888888 7777
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 255 ~~ 256 (256)
T cd08218 255 FI 256 (256)
T ss_pred CC
Confidence 64
No 192
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=71.47 E-value=6.7 Score=30.79 Aligned_cols=76 Identities=14% Similarity=0.099 Sum_probs=49.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceee----c-ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS----L-IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLV 91 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~----~-~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~ 91 (201)
.++.|++++-+.-|..|.+|+...+.... ..+.... + ...++..++.+..+.+.+++..+| +.|..+.++
T Consensus 187 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~l 261 (267)
T cd06610 187 KADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDP---SKRPTAEEL 261 (267)
T ss_pred ccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCCh---hhCcCHHHH
Confidence 36889999999999999998764322110 0000000 0 011123577888899999999877 667888888
Q ss_pred hccCccc
Q psy10243 92 RLDLGFM 98 (201)
Q Consensus 92 d~~~~~~ 98 (201)
..|+|+
T Consensus 262 -l~~p~~ 267 (267)
T cd06610 262 -LKHKFF 267 (267)
T ss_pred -hhCCCC
Confidence 788875
No 193
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=71.43 E-value=4 Score=33.63 Aligned_cols=76 Identities=9% Similarity=-0.057 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-------HH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-------MC 88 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-------~~ 88 (201)
+.++.|++++-+.-|..|.+|+...+.... ...+..-.......++.+..+.+.++|..+| +.|. .+
T Consensus 175 ~~~DvwslG~il~el~tg~~Pf~~~~~~~~---~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp---~~R~~~~~~~~~~ 248 (321)
T cd05591 175 PSVDWWALGVLMYEMMAGQPPFEADNEDDL---FESILHDDVLYPVWLSKEAVSILKAFMTKNP---NKRLGCVASQGGE 248 (321)
T ss_pred CccceechhHHHHHHhcCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCHHHHHHHHHHhccCH---HHcCCCCCCCCCH
Confidence 457899999999999999999875443211 1111111111112378888899999998876 4454 77
Q ss_pred HHHhccCccc
Q psy10243 89 GLVRLDLGFM 98 (201)
Q Consensus 89 ~~~d~~~~~~ 98 (201)
+++ ..|+|+
T Consensus 249 ~~~-~~hp~~ 257 (321)
T cd05591 249 DAI-KQHPFF 257 (321)
T ss_pred HHH-hcCCcc
Confidence 788 899998
No 194
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=71.30 E-value=5.4 Score=31.15 Aligned_cols=77 Identities=12% Similarity=-0.057 Sum_probs=49.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+.-+..|..|+......... ..............++.+....+.+++..+| +.|..+.++ ..|
T Consensus 181 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rpt~~~l-l~~ 254 (257)
T cd08225 181 NKTDIWSLGCVLYELCTLKHPFEGNNLHQLV--LKICQGYFAPISPNFSRDLRSLISQLFKVSP---RDRPSITSI-LKR 254 (257)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHH--HHHhcccCCCCCCCCCHHHHHHHHHHhccCh---hhCcCHHHH-hhC
Confidence 3478899988888888898887543221111 1111111111123477888888889998877 667788888 788
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 255 ~~~ 257 (257)
T cd08225 255 PFL 257 (257)
T ss_pred CCC
Confidence 774
No 195
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=70.88 E-value=2.8 Score=34.20 Aligned_cols=81 Identities=7% Similarity=-0.066 Sum_probs=52.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc------------------cce--eeccc-------CCcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR------------------RVV--QSLIA-------SEWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~--f~~~~-------~~~~~is~~~~ 68 (201)
..++.|++++-+.-|.+|.+|+...+........ ... +.+.. .....++.+..
T Consensus 184 ~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (309)
T cd07872 184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGI 263 (309)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHH
Confidence 3578899999999999999888643321100000 000 00000 01124788999
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
+.+.++|..+| +.|..+.++ +.|+|+..
T Consensus 264 ~li~~~L~~dp---~~R~t~~e~-l~h~~~~~ 291 (309)
T cd07872 264 ELLTKFLQYES---KKRISAEEA-MKHAYFRS 291 (309)
T ss_pred HHHHHhccCCh---hhCCCHHHH-hcChhhhh
Confidence 99999999977 668888999 89999954
No 196
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=70.86 E-value=2.7 Score=35.63 Aligned_cols=83 Identities=12% Similarity=-0.049 Sum_probs=53.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
..++.|++++-++-|.+|.+|+...+........ .......-..+..+|.+..+.+.++|..+|.. .-|..+.++ .+
T Consensus 226 ~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r-~~R~s~~el-l~ 303 (370)
T cd05596 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVR-LGRNGVDEI-KS 303 (370)
T ss_pred CceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhc-cCCCCHHHH-hc
Confidence 3578999999999999999999865432111111 00011111222348999999999999764411 126678888 89
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|+|+.+
T Consensus 304 h~~~~~ 309 (370)
T cd05596 304 HPFFKN 309 (370)
T ss_pred CcccCC
Confidence 999953
No 197
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=70.82 E-value=5.1 Score=31.96 Aligned_cols=80 Identities=10% Similarity=-0.120 Sum_probs=50.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-++-|..|.+|+...................-.....++.+..+.+.+++..+| .-|..+.++ ..|+
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~~i-l~~~ 263 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDP---DDRPTAAEL-LKHP 263 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccCh---hhCcCHHHH-hcCh
Confidence 378899999999999999988643211100000000000000112477888889999998877 567888888 8999
Q ss_pred cccc
Q psy10243 97 FMIN 100 (201)
Q Consensus 97 ~~~~ 100 (201)
|+.+
T Consensus 264 ~~~~ 267 (280)
T cd06611 264 FVSD 267 (280)
T ss_pred hhcc
Confidence 8853
No 198
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=70.81 E-value=7.2 Score=31.30 Aligned_cols=79 Identities=16% Similarity=0.084 Sum_probs=50.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+..+-|++++-+..|..|.+|+............+.... ..... ..+|.+....+.++|..+| ..|. .+.
T Consensus 175 ~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~p---~~R~~~~~~~~~ 250 (278)
T cd05606 175 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-MAVELPDSFSPELRSLLEGLLQRDV---NRRLGCLGRGAQ 250 (278)
T ss_pred cccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-cCCCCCCcCCHHHHHHHHHHhhcCH---HhccCCCCCCHH
Confidence 346889999999999999999865432211111111111 11112 2378899999999998876 4444 677
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 251 ~l-l~~~~~~ 259 (278)
T cd05606 251 EV-KEHPFFR 259 (278)
T ss_pred HH-HhCcccc
Confidence 77 7888884
No 199
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=70.67 E-value=3.4 Score=34.07 Aligned_cols=77 Identities=12% Similarity=0.004 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH-----HH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC-----GL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~-----~~ 90 (201)
+.++.|++++-+.-|.+|..|+...+.... ...+....-.-...++.+..+.+.++|..+| ..|... .+
T Consensus 175 ~~~DiwslGvil~~l~~G~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP---~~R~s~~~~~~~~ 248 (318)
T cd05570 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDEL---FQSILEDEVRYPRWLSKEAKSILKSFLTKNP---EKRLGCLPTGEQD 248 (318)
T ss_pred cchhhhhHHHHHHHHhhCCCCCCCCCHHHH---HHHHHcCCCCCCCcCCHHHHHHHHHHccCCH---HHcCCCCCCCHHH
Confidence 357899999999999999999865432211 1111110111113488899999999999877 456555 77
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 249 l-l~~~~~~ 256 (318)
T cd05570 249 I-KGHPFFR 256 (318)
T ss_pred H-hcCCCcC
Confidence 7 8899984
No 200
>KOG4578|consensus
Probab=70.50 E-value=3.4 Score=34.77 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=27.3
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~ 164 (201)
......++.|+.+|.|+|..||..|++..|..
T Consensus 367 ~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 367 KPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred cHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 44566788899999999999999999988754
No 201
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=70.14 E-value=7.6 Score=31.00 Aligned_cols=77 Identities=12% Similarity=-0.137 Sum_probs=49.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+.-|.+|.+|+.............. ..........++.+..+.+.+++..+| .-|..+.++ +.|+
T Consensus 206 ~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p---~~Rp~~~el-l~~~ 280 (282)
T cd06636 206 RSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNY---LSRPSTEQL-LKHP 280 (282)
T ss_pred ccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCCh---hhCcCHHHH-hcCC
Confidence 47889999999999999998864332111100000 000111112377888899999998877 567777888 8888
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 281 ~~ 282 (282)
T cd06636 281 FI 282 (282)
T ss_pred CC
Confidence 75
No 202
>PLN02223 phosphoinositide phospholipase C
Probab=70.13 E-value=17 Score=32.91 Aligned_cols=70 Identities=9% Similarity=0.063 Sum_probs=52.3
Q ss_pred CCcccHHHHHHHhhhhCcCCCcceeHHHHHHHH---HHhC--CCCCHHHHHHHHHhhCCC--------CCCcccHHHHHH
Q psy10243 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVM---TNLG--EKLTEEEVDAMIAVADQE--------GLGYIRYEDFVQ 196 (201)
Q Consensus 130 ~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l---~~lg--~~~s~~ei~~i~~~~d~~--------~~g~I~~~eF~~ 196 (201)
......+.++.+|..+ ..+.|.++.+.+.+.+ .... ...+.++++.++..+-.. ..+.++.+.|..
T Consensus 10 ~~~~~p~~v~~~f~~~-~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~ 88 (537)
T PLN02223 10 HPANQPDLILNFFGNE-FHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNE 88 (537)
T ss_pred CCCCCcHHHHHHHHHh-hcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHH
Confidence 3445678899999988 3677899999999998 4432 356788888888775422 235699999999
Q ss_pred HHhc
Q psy10243 197 VMLR 200 (201)
Q Consensus 197 ~l~~ 200 (201)
+|.+
T Consensus 89 ~L~s 92 (537)
T PLN02223 89 FLFS 92 (537)
T ss_pred HhcC
Confidence 8865
No 203
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=70.04 E-value=6.9 Score=31.93 Aligned_cols=32 Identities=9% Similarity=0.005 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.+.+.++.+.++|..+| ..|.++.++ +.|||+
T Consensus 286 ~~~~~~dli~~mL~~dP---~~R~t~~e~-l~hp~f 317 (317)
T cd07868 286 PDSKAFHLLQKLLTMDP---IKRITSEQA-MQDPYF 317 (317)
T ss_pred CChHHHHHHHHHhccCc---ccCCCHHHH-hcCCCC
Confidence 45567788888888877 567788888 788875
No 204
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=70.00 E-value=7.6 Score=31.38 Aligned_cols=81 Identities=12% Similarity=0.059 Sum_probs=51.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCcC-CCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEWY-RCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~~-~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
-++.|++++-+..|..|..|+......... ..+.+.. ....++. .++.+....+.+++..+| +.|..+.++ ..
T Consensus 198 ~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rp~~~~i-l~ 272 (296)
T cd06618 198 RADVWSLGISLVELATGQFPYKNCKTEFEV-LTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDH---RKRPKYREL-LQ 272 (296)
T ss_pred chhHHHHHHHHHHHHhCCCCCCcchhHHHH-HHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCCh---hhCCCHHHH-hc
Confidence 468899999999999999987542211000 1111111 0111122 267788888888998877 667888888 88
Q ss_pred Cccccccc
Q psy10243 95 LGFMINVL 102 (201)
Q Consensus 95 ~~~~~~~~ 102 (201)
++|+....
T Consensus 273 ~~~~~~~~ 280 (296)
T cd06618 273 HPFIRRYE 280 (296)
T ss_pred Chhhhccc
Confidence 88886443
No 205
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=69.95 E-value=18 Score=25.39 Aligned_cols=50 Identities=18% Similarity=0.412 Sum_probs=32.8
Q ss_pred hhhCcCCCcceeHHHHHHHHHH----------hCCCCCHHHHHHHHHhhCCCCCCcccHH
Q psy10243 143 RVFDKDGDGIINVAELRHVMTN----------LGEKLTEEEVDAMIAVADQEGLGYIRYE 192 (201)
Q Consensus 143 ~~~D~~~~G~Is~~el~~~l~~----------lg~~~s~~ei~~i~~~~d~~~~g~I~~~ 192 (201)
+.+|+..+-|||.+++++..+. .|..++..-+-.++-+....+..-++-.
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~~ 69 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLSTD 69 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCHH
Confidence 3578888888888888888765 2455666666666666655555444433
No 206
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=69.70 E-value=6.1 Score=30.59 Aligned_cols=77 Identities=12% Similarity=-0.010 Sum_probs=47.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccccee-ecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQ-SLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f-~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-++-+.+|..|+..... ......+... .....-...++.+...++.+++..+| ..|..+.++ ..|
T Consensus 183 ~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p---~~Rp~~~~l-l~~ 257 (260)
T cd06606 183 AADIWSLGCTVIEMATGKPPWSELGN-PMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDP---KKRPTADEL-LQH 257 (260)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCCh---hhCCCHHHH-hhC
Confidence 46788998888889899988765431 1110011100 01111112368888888888988876 567777887 778
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 258 ~~~ 260 (260)
T cd06606 258 PFL 260 (260)
T ss_pred CCC
Confidence 774
No 207
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=69.69 E-value=6.1 Score=31.01 Aligned_cols=78 Identities=12% Similarity=0.019 Sum_probs=48.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccccee--ecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQ--SLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f--~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.-++.|++++.+.-+..|.+|+......... ...... ...-..+..++.+...++.+++..+| +-|..+.++ .
T Consensus 185 ~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~i-~ 259 (264)
T cd06626 185 RAADIWSLGCVVLEMATGKRPWSELDNEFQI-MFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDP---KKRPTASEL-L 259 (264)
T ss_pred cccchHHHHHHHHHHHhCCCCccCCcchHHH-HHHHhcCCCCCCCcccccCHHHHHHHHHHccCCc---ccCCCHHHH-h
Confidence 4468899999999999999998643221111 111110 11111223468888889999998877 446777777 7
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 260 ~~~~~ 264 (264)
T cd06626 260 QHPFV 264 (264)
T ss_pred cCCCC
Confidence 77764
No 208
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=69.42 E-value=7.7 Score=30.82 Aligned_cols=81 Identities=10% Similarity=-0.104 Sum_probs=50.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+.-|..|.+|+............... ....-.+..++.+..+.+.+++..+| +-|..+.++ ..+
T Consensus 181 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~i-l~~ 255 (277)
T cd06917 181 TKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEP---KERLSAEEL-LKS 255 (277)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCc---ccCcCHHHH-hhC
Confidence 3578899999999999999998643221110000000 00111122367788888888888877 556777777 778
Q ss_pred cccccc
Q psy10243 96 GFMINV 101 (201)
Q Consensus 96 ~~~~~~ 101 (201)
+|+.+.
T Consensus 256 ~~~~~~ 261 (277)
T cd06917 256 KWIKAH 261 (277)
T ss_pred hHhhcc
Confidence 888543
No 209
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=68.67 E-value=4.5 Score=32.94 Aligned_cols=80 Identities=13% Similarity=-0.115 Sum_probs=52.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc--------------------cceeecccC-------CcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR--------------------RVVQSLIAS-------EWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------------------~~~f~~~~~-------~~~~is~~~~ 68 (201)
..++.|++++-+.-|.+|.+|+...+........ ...+..... ....++.+..
T Consensus 188 ~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (309)
T cd07845 188 TAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGL 267 (309)
T ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHH
Confidence 4578899999999999999988643321100000 001111111 0122688889
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
+.+.++|..+| +.|..+.++ ..|+|+.
T Consensus 268 ~li~~ml~~dp---~~R~t~~~i-l~h~~f~ 294 (309)
T cd07845 268 RLLNFLLMYDP---KKRATAEEA-LESSYFK 294 (309)
T ss_pred HHHHHHhcCCh---hhCcCHHHH-hcChhhc
Confidence 99999999987 678888898 8999995
No 210
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=68.38 E-value=7.8 Score=31.35 Aligned_cols=76 Identities=11% Similarity=-0.057 Sum_probs=50.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcC-CCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWY-RCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++.|++++-++.|.+|..|+........ ...+.. ...... .++....+.+.++|..+| ..|. .++
T Consensus 177 ~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~~~i~~-~~~~~~~~~~~~~~~li~~~l~~dp---~~R~~~~~~~~~ 249 (291)
T cd05612 177 KAVDWWALGILIYEMLVGYPPFFDDNPFGI---YEKILA-GKLEFPRHLDLYAKDLIKKLLVVDR---TRRLGNMKNGAD 249 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHh-CCcCCCccCCHHHHHHHHHHcCCCH---HHccCCccCCHH
Confidence 457899999999999999998865332111 111110 111222 378888899999999877 3344 488
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 250 ~~-l~h~~~~ 258 (291)
T cd05612 250 DV-KNHRWFK 258 (291)
T ss_pred HH-hcCcccc
Confidence 88 8999994
No 211
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=68.25 E-value=3.5 Score=34.60 Aligned_cols=79 Identities=10% Similarity=0.021 Sum_probs=49.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH---HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM---CGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~---~~~~ 91 (201)
+..+.|++++-++-|.+|.+|+...+........ ..-..+.-.....+|.+..+++.+++. +| ..|.. +.++
T Consensus 218 ~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p---~~R~~~~~~~~l 293 (364)
T cd05599 218 KECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EA---ERRLGNNGVNEI 293 (364)
T ss_pred CeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CH---hhcCCCCCHHHH
Confidence 3578899999999999999998754322110000 000111112223588999988888875 33 34444 8888
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
+.|+|+.
T Consensus 294 -l~h~~~~ 300 (364)
T cd05599 294 -KSHPFFK 300 (364)
T ss_pred -hcCCCcC
Confidence 8999994
No 212
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=67.51 E-value=4.6 Score=32.57 Aligned_cols=82 Identities=15% Similarity=0.017 Sum_probs=51.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-ccee-----------ec-------------ccCCcCCCCHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQ-----------SL-------------IASEWYRCSPDTRRC 70 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f-----------~~-------------~~~~~~~is~~~~~~ 70 (201)
+.++.|++++-+.-|..|++++..+......... +.+. .. ...-...++.+..+.
T Consensus 182 ~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (298)
T cd07841 182 VGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDL 261 (298)
T ss_pred cHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHH
Confidence 4578899999998898998877644321100000 0000 00 000012367888889
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
+.+++..+| ..|..+.++ ..|+|+.+.
T Consensus 262 i~~~l~~~P---~~R~s~~e~-l~~~~~~~~ 288 (298)
T cd07841 262 LQRLLTLNP---NKRITARQA-LEHPYFSND 288 (298)
T ss_pred HHHHhcCCc---ccCcCHHHH-hhCccccCC
Confidence 999999987 667888999 889998653
No 213
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=67.50 E-value=3.8 Score=32.77 Aligned_cols=78 Identities=13% Similarity=-0.075 Sum_probs=48.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccc---------------------ceee-----cccCCcCCCCHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR---------------------VVQS-----LIASEWYRCSPDTRRC 70 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------------~~f~-----~~~~~~~~is~~~~~~ 70 (201)
.++.|++++-++-|..|..|+...++........ ..+. ....-...++.+..+.
T Consensus 181 ~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (284)
T cd07860 181 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDL 260 (284)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHH
Confidence 4788999999999999998886443211000000 0000 0000012377888888
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.+++..+| ..|..+.++ ..|+|+
T Consensus 261 i~~~l~~~P---~~Rpt~~~~-l~~~~f 284 (284)
T cd07860 261 LSQMLHYDP---NKRISAKAA-LAHPFF 284 (284)
T ss_pred HHHhcCCCc---ccCCCHHHH-hcCCCC
Confidence 999998877 457777888 788875
No 214
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=67.49 E-value=7.8 Score=31.20 Aligned_cols=81 Identities=16% Similarity=-0.013 Sum_probs=50.0
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcc
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGF 97 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~ 97 (201)
++.|++++-+.-+.+|..|+............+......-.....++.+....+.+++..+| +.|..+.++ ..|+|
T Consensus 196 ~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~~i-l~~~~ 271 (285)
T cd06648 196 VDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDP---AQRATAAEL-LNHPF 271 (285)
T ss_pred ccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccCh---hhCcCHHHH-ccCcc
Confidence 68899999999999999887532211000000100000000112377888888888998877 557788888 88988
Q ss_pred ccccc
Q psy10243 98 MINVL 102 (201)
Q Consensus 98 ~~~~~ 102 (201)
+.+..
T Consensus 272 ~~~~~ 276 (285)
T cd06648 272 LAKAG 276 (285)
T ss_pred cccCC
Confidence 86543
No 215
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=67.26 E-value=12 Score=30.60 Aligned_cols=45 Identities=11% Similarity=0.050 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHH
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNF 111 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF 111 (201)
++.+....+.++|..+| +.|..+.++ ..++|+.+......++..+
T Consensus 259 ~~~~~~~li~~~l~~~P---~~Rpt~~~l-l~~~~~~~~~~~~~~~~~~ 303 (308)
T cd06615 259 FSDEFQDFVDKCLKKNP---KERADLKEL-TKHPFIKRAELEEVDFAGW 303 (308)
T ss_pred cCHHHHHHHHHHccCCh---hhCcCHHHH-hcChhhhhcccccchhhhh
Confidence 57778888999999887 668889999 8999996543333444443
No 216
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=67.23 E-value=6.7 Score=31.60 Aligned_cols=76 Identities=13% Similarity=-0.060 Sum_probs=49.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc---CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA---SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~---~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++.|++++-+..|.+|.+|+......... ........ .....++.+....+.+++..+| +-|..+.++ .
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l 267 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVL---LKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHP---ETRPSAAQL-L 267 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHH---HHHhcCCCccCCCCcccCHHHHHHHHHHhcCCc---ccCcCHHHH-h
Confidence 368899999999999999987643211100 00110000 0112477888889999998877 556778888 8
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|+|+.
T Consensus 268 ~~~~~~ 273 (292)
T cd06644 268 EHPFVS 273 (292)
T ss_pred cCcccc
Confidence 898874
No 217
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=67.14 E-value=9.1 Score=31.13 Aligned_cols=26 Identities=8% Similarity=-0.171 Sum_probs=21.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeec
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLES 41 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~ 41 (201)
+.++.|++++-+.-|..|.+|+....
T Consensus 195 ~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 195 KAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cHHHHHhHHHHHHHHHhCCCCccccc
Confidence 34789999999999999998886543
No 218
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=67.02 E-value=4.4 Score=34.35 Aligned_cols=79 Identities=10% Similarity=0.028 Sum_probs=49.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH---HHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF---MCGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~---~~~~~ 91 (201)
+.++.|++++.++-|.+|.+|+.............. .....-..+..+|++..+.+.+++ .+| +-|. .+.++
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p---~~R~~~~~~~ei 302 (382)
T cd05625 227 QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGP---EDRLGKNGADEI 302 (382)
T ss_pred CeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCH---hHcCCCCCHHHH
Confidence 457889999999999999999975433211111100 111222334558999999998865 344 2333 27777
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
..|+|+.
T Consensus 303 -~~hp~f~ 309 (382)
T cd05625 303 -KAHPFFK 309 (382)
T ss_pred -hcCCCcC
Confidence 8899983
No 219
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=66.85 E-value=4.3 Score=33.51 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=50.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH------H
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC------G 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~------~ 89 (201)
+.++.|++++-++-|.+|..|+........ .+.+..-.......++.+..+.+.++|..+| +.|... .
T Consensus 175 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~~ 248 (320)
T cd05590 175 PSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FEAILNDEVVYPTWLSQDAVDILKAFMTKNP---TMRLGSLTLGGEE 248 (320)
T ss_pred CccchhhhHHHHHHHhhCCCCCCCCCHHHH---HHHHhcCCCCCCCCCCHHHHHHHHHHcccCH---HHCCCCCCCCCHH
Confidence 357899999999999999999875443211 1111111111112388889999999998876 445444 6
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 249 ~~-~~h~~f~ 257 (320)
T cd05590 249 AI-LRHPFFK 257 (320)
T ss_pred HH-HcCCCcC
Confidence 66 7899984
No 220
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=66.43 E-value=5.4 Score=32.02 Aligned_cols=79 Identities=10% Similarity=-0.139 Sum_probs=49.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-------------------cceeeccc-----CCcCCCCHHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-------------------RVVQSLIA-----SEWYRCSPDTRRCL 71 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------------~~~f~~~~-----~~~~~is~~~~~~i 71 (201)
+.++.|++++-+.-|..|.+++............ +..+.... .-...++....+.+
T Consensus 188 ~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 267 (290)
T cd07862 188 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 267 (290)
T ss_pred CccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHH
Confidence 3578999999998888888888754321100000 00000000 00123777888999
Q ss_pred HHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 72 LMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 72 l~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.++|..+| +.|..+.++ +.|+|+
T Consensus 268 ~~~l~~~P---~~R~s~~~~-l~hp~f 290 (290)
T cd07862 268 LKCLTFNP---AKRISAYSA-LSHPYF 290 (290)
T ss_pred HHHhccCc---hhcCCHHHH-hcCCCC
Confidence 99999987 678888888 888875
No 221
>KOG0608|consensus
Probab=66.40 E-value=12 Score=34.85 Aligned_cols=85 Identities=9% Similarity=-0.021 Sum_probs=55.3
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHHH-HHHHhccC
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFM-CGLVRLDL 95 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~-~~~~d~~~ 95 (201)
-+-|++++.++-|.+|-+||...+-..++.....--.+.+-. .+.+|++++..|.++..-. +..+-.. ..++ ..|
T Consensus 852 cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sa--d~RLGkng~d~v-KaH 928 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSA--DSRLGKNGADQV-KAH 928 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcCh--hhhhcccchhhh-hcC
Confidence 356899999999999999998877665553332222222222 2459999999998865331 1122222 2346 789
Q ss_pred ccccccccccccHHH
Q psy10243 96 GFMINVLRFSLTFVN 110 (201)
Q Consensus 96 ~~~~~~~~g~i~f~e 110 (201)
+|| ..|||..
T Consensus 929 pfF-----kgIDfss 938 (1034)
T KOG0608|consen 929 PFF-----KGIDFSS 938 (1034)
T ss_pred ccc-----cccchHh
Confidence 999 5678766
No 222
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=66.19 E-value=8.8 Score=30.20 Aligned_cols=79 Identities=14% Similarity=-0.064 Sum_probs=48.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCC-cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
+.++.|++++-+..+..|.+|+................. ..... ...++.+....+.+++..+| +.|..+.++ .
T Consensus 187 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~l-l 262 (268)
T cd06630 187 RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQP---EDRPPSREL-L 262 (268)
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCc---ccCcCHHHH-h
Confidence 346889999999999999998864322111111101000 11111 12377888888888998877 457777777 7
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 263 ~~~~~ 267 (268)
T cd06630 263 KHPVF 267 (268)
T ss_pred cCccc
Confidence 88775
No 223
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=65.87 E-value=4.1 Score=33.82 Aligned_cols=79 Identities=10% Similarity=-0.068 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH-HHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM-CGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~-~~~~d~ 93 (201)
+.++.|++++-++.|.+|.+|+.............. .-.+.-.....++.+....+.++|. +| ..|.. +.++ +
T Consensus 209 ~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp---~~R~~s~~~l-l 283 (350)
T cd05573 209 LECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP---EDRLGSFEEI-K 283 (350)
T ss_pred CceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch---hhcCCCHHHH-h
Confidence 457889999999999999999875442211100000 0111122223378888888888885 44 55666 8888 8
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|+|+.
T Consensus 284 ~hp~~~ 289 (350)
T cd05573 284 SHPFFK 289 (350)
T ss_pred cCCCcC
Confidence 999994
No 224
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=65.82 E-value=7.4 Score=30.56 Aligned_cols=78 Identities=10% Similarity=-0.074 Sum_probs=47.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH--HHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC--GLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~--~~~d 92 (201)
.-++.|++++-+..+..|..|+...+..... ....... ....-...++.+....+.+++..+| ..|... +++
T Consensus 178 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~~~l- 252 (258)
T cd05578 178 VAVDWWSLGVTAYECLRGKRPYRGHSRTIRD-QIRAKQETADVLYPATWSTEAIDAINKLLERDP---QKRLGDNLKDL- 252 (258)
T ss_pred CcccchhhHHHHHHHHhCCCCCCCCCccHHH-HHHHHhccccccCcccCcHHHHHHHHHHccCCh---hHcCCccHHHH-
Confidence 3467888988888898999987755432111 1111111 1111112367788888888888876 445555 777
Q ss_pred ccCccc
Q psy10243 93 LDLGFM 98 (201)
Q Consensus 93 ~~~~~~ 98 (201)
.+|+|+
T Consensus 253 ~~~~~~ 258 (258)
T cd05578 253 KNHPYF 258 (258)
T ss_pred hcCCCC
Confidence 677764
No 225
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=65.61 E-value=7.6 Score=31.23 Aligned_cols=92 Identities=10% Similarity=0.063 Sum_probs=56.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccc-cccc-cc-----ceeecccCCc--CCCCHHHHHHHHHHhCCCCChhHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKL-DDCN-RR-----VVQSLIASEW--YRCSPDTRRCLLMTLRQAQMPGHLRFM 87 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~-~~-----~~f~~~~~~~--~~is~~~~~~il~~L~~~~s~~~~~~~ 87 (201)
-++.|++++-+.-|..|.+|+....... ...+ .. ....+..... ...+.+..+.+.+++..+| ..|..
T Consensus 183 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt 259 (287)
T cd06621 183 TSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDP---TRRPT 259 (287)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCc---ccCCC
Confidence 3678999988888989998887552200 0000 00 0011111111 1145667788888888877 55788
Q ss_pred HHHHhccCccccccccccccHHHHH
Q psy10243 88 CGLVRLDLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 88 ~~~~d~~~~~~~~~~~g~i~f~eF~ 112 (201)
+.++ ..|+|+.+.....++-..|.
T Consensus 260 ~~ei-l~~~~~~~~~~~~~~~~~~~ 283 (287)
T cd06621 260 PWDM-LEHPWIKAQMKKKVNMAKFV 283 (287)
T ss_pred HHHH-HhCccccccccchhhHHHHH
Confidence 8899 89999977666566655655
No 226
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=65.55 E-value=6.1 Score=31.73 Aligned_cols=79 Identities=13% Similarity=0.003 Sum_probs=50.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc---------c------ceee----------cccCCcCCCCHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---------R------VVQS----------LIASEWYRCSPDTRRC 70 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------~------~~f~----------~~~~~~~~is~~~~~~ 70 (201)
+.++-|++++-+..|..|.+|+...+........ . .... ........++.+..++
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 4578899999999999999887643321100000 0 0000 0000012478889999
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.++|..+| ..|..+.++ ..|+|+
T Consensus 271 i~~~l~~~P---~~R~~~~ei-l~~~~~ 294 (295)
T cd07837 271 LQKMLRYDP---AKRISAKAA-LTHPYF 294 (295)
T ss_pred HHHHccCCh---hhcCCHHHH-hcCCCc
Confidence 999998877 567888888 888886
No 227
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=65.26 E-value=7.9 Score=32.02 Aligned_cols=80 Identities=9% Similarity=-0.040 Sum_probs=50.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeec---ccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHH----
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL---IASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFM---- 87 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~---~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~---- 87 (201)
..++.|++++-++-|..|..|+...+..........++.. ..... ..++.+..+.+.++|..+| ..|..
T Consensus 175 ~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~ 251 (327)
T cd05617 175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDP---KERLGCQPQ 251 (327)
T ss_pred chheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCH---HHcCCCCCC
Confidence 3578899999999999999999654432221111111110 01111 2388899999999999877 33432
Q ss_pred --HHHHhccCcccc
Q psy10243 88 --CGLVRLDLGFMI 99 (201)
Q Consensus 88 --~~~~d~~~~~~~ 99 (201)
+.++ .+|+|+.
T Consensus 252 ~~~~~i-~~h~~f~ 264 (327)
T cd05617 252 TGFSDI-KSHTFFR 264 (327)
T ss_pred CCHHHH-HcCCCCC
Confidence 4566 7899883
No 228
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=64.48 E-value=4 Score=33.77 Aligned_cols=80 Identities=6% Similarity=-0.068 Sum_probs=50.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCC----cCCCCHHHHHHHHHHhCCCCChhHHHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASE----WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~----~~~is~~~~~~il~~L~~~~s~~~~~~~~~~ 90 (201)
+.++-|++++.+.-|.+|.+|+...+.......... ...+.... ...++.+....+.++|..++ +.+..+.+
T Consensus 177 ~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~---~rr~s~~~ 253 (333)
T cd05600 177 FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPS---RRFGSLED 253 (333)
T ss_pred CccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChh---hhcCCHHH
Confidence 457889999999999999999865432211100100 00011111 12478899999988986533 56667888
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 254 l-l~h~~~~ 261 (333)
T cd05600 254 I-KNHPFFK 261 (333)
T ss_pred H-HhCcccC
Confidence 8 8999984
No 229
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=64.32 E-value=4.2 Score=34.55 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=52.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+..+.|++++-++-|..|.+|+.............. --...-..+..+|.+..+++.+++...+.+ .-|..+.++ ..
T Consensus 227 ~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~-~~R~~~~~~-l~ 304 (381)
T cd05626 227 QLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEER-LGRNGADDI-KA 304 (381)
T ss_pred CccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccc-cCCCCHHHH-hc
Confidence 457899999999999999999976443221111110 011222333458999999998877543311 235677888 89
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
|+|+.
T Consensus 305 hp~f~ 309 (381)
T cd05626 305 HPFFS 309 (381)
T ss_pred CcccC
Confidence 99984
No 230
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=64.05 E-value=6.8 Score=32.33 Aligned_cols=77 Identities=14% Similarity=-0.000 Sum_probs=50.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
..++-|++++-++-|.+|.+|+......... ..+..-.-.-...++.+..+.+.++|..+| +.|. ...+
T Consensus 179 ~~~DiwslG~il~ell~G~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~~~~~~ 252 (323)
T cd05584 179 KAVDWWSLGALMYDMLTGAPPFTAENRKKTI---DKILKGKLNLPPYLTPEARDLLKKLLKRNP---SSRLGAGPGDAAE 252 (323)
T ss_pred CcceecccHHHHHHHhcCCCCCCCCCHHHHH---HHHHcCCCCCCCCCCHHHHHHHHHHcccCH---hHcCCCCCCCHHH
Confidence 4578899999999999999998754322111 111100011113488899999999999877 4454 6777
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 253 l-~~h~~~~ 260 (323)
T cd05584 253 V-QSHPFFR 260 (323)
T ss_pred H-hcCCCcC
Confidence 7 8899984
No 231
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=63.76 E-value=2.4 Score=35.65 Aligned_cols=88 Identities=8% Similarity=-0.026 Sum_probs=50.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++.|++++-+.-|.+|++|+.............. .....-.+...+|.+..+.+.+.+ .+|.+.--+..+.++ ..
T Consensus 215 ~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei-~~ 292 (360)
T cd05627 215 KLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEI-KS 292 (360)
T ss_pred CcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHH-hc
Confidence 457899999999999999999865432211111100 001111122348889888888865 344221111246777 89
Q ss_pred CccccccccccccHHH
Q psy10243 95 LGFMINVLRFSLTFVN 110 (201)
Q Consensus 95 ~~~~~~~~~g~i~f~e 110 (201)
|+|+. .+++..
T Consensus 293 hp~f~-----~~~~~~ 303 (360)
T cd05627 293 HPFFE-----GVDWGH 303 (360)
T ss_pred CCCCC-----CCCHHH
Confidence 99993 355554
No 232
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=63.69 E-value=10 Score=30.45 Aligned_cols=78 Identities=10% Similarity=0.028 Sum_probs=45.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccc-------------cc----------ccceeecc-----cCCcCCCC--HH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDD-------------CN----------RRVVQSLI-----ASEWYRCS--PD 66 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~----------~~~~f~~~-----~~~~~~is--~~ 66 (201)
.++.|++++-+.-|.+|..++......... .. ....+... ......++ .+
T Consensus 184 ~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (291)
T cd07844 184 SLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPH 263 (291)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchh
Confidence 468899999999999999888533210000 00 00000000 01112344 77
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+.++|..+| +.|..+.++ ..|+|+
T Consensus 264 ~~~li~~~L~~~p---~~Rps~~e~-l~~~~f 291 (291)
T cd07844 264 GEELALKFLQYEP---KKRISAAEA-MKHPYF 291 (291)
T ss_pred HHHHHHHHhccCc---ccccCHHHH-hcCCCC
Confidence 7888888888877 557777777 777764
No 233
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=63.15 E-value=12 Score=25.53 Aligned_cols=49 Identities=20% Similarity=0.177 Sum_probs=22.6
Q ss_pred CcceeHHHHHHHHHHhC--CCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 150 DGIINVAELRHVMTNLG--EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg--~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
||.++..|...+-..+. ..+++++...++..+........++.+|...+
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 63 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLI 63 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 55555555444433221 23455555555555443333344555554433
No 234
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=62.92 E-value=9.6 Score=30.20 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=48.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccc--------------------------ccccceeecccCCcCCCCHHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDD--------------------------CNRRVVQSLIASEWYRCSPDTRRC 70 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------------~~~~~~f~~~~~~~~~is~~~~~~ 70 (201)
-++.|++++-+.-+..|.++++........ ................++.+..+.
T Consensus 179 ~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (282)
T cd07829 179 AVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDL 258 (282)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHH
Confidence 468899988888888898887654321000 000000111111122357788888
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.+++..+| +.|..+.++ ..|||+
T Consensus 259 i~~~l~~~P---~~Rp~~~~~-l~~p~~ 282 (282)
T cd07829 259 LSKMLQYNP---AKRISAKEA-LKHPYF 282 (282)
T ss_pred HHHhhccCc---ccCCCHHHH-hhCcCC
Confidence 889999887 567778888 788875
No 235
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=62.85 E-value=11 Score=29.12 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=46.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-+.-|.+|..|+...... .............-...++.+....+.+++..+| +.|..+.++ ..++
T Consensus 183 ~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rp~~~~l-l~~~ 256 (258)
T cd08215 183 KSDIWSLGCVLYELCTLKHPFEGENLL--ELALKILKGQYPPIPSQYSSELRNLVSSLLQKDP---EERPSIAQI-LQSP 256 (258)
T ss_pred cccHHHHHHHHHHHHcCCCCCCCCcHH--HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh---hhCcCHHHH-hcCC
Confidence 477899988888888998887543311 1011111111111112467778888888888877 667777777 7777
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 257 ~~ 258 (258)
T cd08215 257 FI 258 (258)
T ss_pred CC
Confidence 64
No 236
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=62.60 E-value=8.6 Score=31.75 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=50.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++.|++++-++-|.+|..|+........ ...+.. .... ...++.+....+.++|..+| +.|. .+.
T Consensus 174 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~~~~~~-~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~ 246 (323)
T cd05595 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM-EEIRFPRTLSPEAKSLLAGLLKKDP---KQRLGGGPSDAK 246 (323)
T ss_pred chhchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHhc-CCCCCCCCCCHHHHHHHHHHccCCH---HHhCCCCCCCHH
Confidence 346889999999999999999864332111 111110 0111 13488999999999999877 4454 677
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 247 ~~-l~h~~~~ 255 (323)
T cd05595 247 EV-MEHRFFL 255 (323)
T ss_pred HH-HcCCCcC
Confidence 77 7899884
No 237
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=62.46 E-value=8.8 Score=31.29 Aligned_cols=77 Identities=10% Similarity=-0.008 Sum_probs=50.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH----HHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM----CGLV 91 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~----~~~~ 91 (201)
.++-|++++-+.-+.+|..|+......... .+.... ..-.....++.+....+.+++..+| +.|.. +.++
T Consensus 212 ~~Di~slG~ll~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~s~~~~~~~l 286 (316)
T cd05574 212 AVDWWTLGILLYEMLYGTTPFKGSNRDETF--SNILKKEVTFPGSPPVSSSARDLIRKLLVKDP---SKRLGSKRGAAEI 286 (316)
T ss_pred hHHHHHHHHHHHHHhhCCCCCCCCchHHHH--HHHhcCCccCCCccccCHHHHHHHHHHccCCH---hHCCCchhhHHHH
Confidence 468899999999999999998654322111 111100 0011112278888888888998876 55656 8888
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
+.|+|++
T Consensus 287 -l~~~~~~ 293 (316)
T cd05574 287 -KQHPFFR 293 (316)
T ss_pred -HcCchhh
Confidence 8899985
No 238
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=62.10 E-value=6 Score=32.20 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=48.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccc-cc----c--------------------------eeecccCCcCCCC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCN-RR----V--------------------------VQSLIASEWYRCS 64 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~----~--------------------------~f~~~~~~~~~is 64 (201)
+.++.|++++-++-|..|.+|+........... .+ . ...........++
T Consensus 189 ~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (314)
T cd08216 189 EKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFS 268 (314)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHH
Confidence 458999999999999999999864322110000 00 0 0000000001134
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 65 PDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 65 ~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+....+.++|..+| +.|..++++ +.|+|+.
T Consensus 269 ~~~~~li~~~l~~~P---~~Rpt~~~l-l~~p~~~ 299 (314)
T cd08216 269 EHFHQFVELCLQRDP---ESRPSASQL-LNHSFFK 299 (314)
T ss_pred HHHHHHHHHHhhcCC---CcCcCHHHH-hcCchHh
Confidence 567778888888877 567888898 8898874
No 239
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=61.84 E-value=10 Score=29.89 Aligned_cols=75 Identities=9% Similarity=-0.079 Sum_probs=47.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeec-ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL-IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+..+.+|..|+....... ....+... ...-...++.+....+.+++..+| ..|..+.++ ..+
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~~ 264 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQ---AIFKIGENASPEIPSNISSEAIDFLEKTFEIDH---NKRPTAAEL-LKH 264 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHH---HHHHHhccCCCcCCcccCHHHHHHHHHHccCCc---hhCcCHHHH-hhC
Confidence 4788999999999999999886432211 11111111 111112377888888888888877 556777777 677
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 265 ~~~ 267 (267)
T cd06628 265 PFL 267 (267)
T ss_pred CCC
Confidence 664
No 240
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=61.77 E-value=10 Score=31.74 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+..+++.++|..+| +.|..+.++ +.|+|+.
T Consensus 287 ~~~~~~~li~~mL~~dP---~~R~t~~e~-l~hp~~~ 319 (359)
T cd07876 287 KTSQARDLLSKMLVIDP---DKRISVDEA-LRHPYIT 319 (359)
T ss_pred cchhHHHHHHHHhccCc---ccCCCHHHH-hcCchhh
Confidence 46677888888998887 668889999 9999885
No 241
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=61.72 E-value=8.8 Score=30.45 Aligned_cols=78 Identities=14% Similarity=-0.025 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccc------------cccccc--------eeecc-------cCCcCCCCHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLD------------DCNRRV--------VQSLI-------ASEWYRCSPDTRR 69 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------~~~~~~--------~f~~~-------~~~~~~is~~~~~ 69 (201)
-++.|++++-++-+..|..++...+.... ...... ...+. ..-+..++.+..+
T Consensus 179 ~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (283)
T cd05118 179 PVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALD 258 (283)
T ss_pred hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHH
Confidence 47889999999999999988754331000 000000 00000 0012236778888
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
++.+++..+| ..|..+.++ ..|+|+
T Consensus 259 ~i~~~l~~~P---~~Rp~~~~l-l~~~~~ 283 (283)
T cd05118 259 LLSQMLHYDP---HKRITAEQA-LAHPYF 283 (283)
T ss_pred HHHHHhccCc---ccCcCHHHH-hhCCCC
Confidence 9999998877 557777777 777774
No 242
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=61.72 E-value=3.4 Score=34.89 Aligned_cols=78 Identities=9% Similarity=-0.013 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH---HHHHHh
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF---MCGLVR 92 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~---~~~~~d 92 (201)
.++.|++++-++-|.+|.+|+.............. -.......+..++.+..+.+.+++ .+| .-|. .+.++
T Consensus 224 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p---~~R~~~~t~~el- 298 (376)
T cd05598 224 LCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGA---EDRLGKNGADEI- 298 (376)
T ss_pred ceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCH---hhcCCCCCHHHH-
Confidence 46899999999999999999876543221111100 011122233458999999888855 344 3444 78888
Q ss_pred ccCcccc
Q psy10243 93 LDLGFMI 99 (201)
Q Consensus 93 ~~~~~~~ 99 (201)
..|+|+.
T Consensus 299 l~h~~~~ 305 (376)
T cd05598 299 KAHPFFK 305 (376)
T ss_pred hCCCCcC
Confidence 8999994
No 243
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=61.72 E-value=10 Score=30.21 Aligned_cols=73 Identities=12% Similarity=-0.047 Sum_probs=44.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccC------CcCCCCHHHHHHHHHHhCCCCChhHHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIAS------EWYRCSPDTRRCLLMTLRQAQMPGHLRFMCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~------~~~~is~~~~~~il~~L~~~~s~~~~~~~~~ 89 (201)
+.++.|++++-+.-|..|.+|+....... .+...... .....+.+....+.+++..+| +-|..+.
T Consensus 208 ~~~Dv~slGvi~~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~ 278 (286)
T cd06638 208 ARCDVWSLGITAIELGDGDPPLADLHPMR------ALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDY---EKRPTVS 278 (286)
T ss_pred chhhhhhHHHHHHHHhcCCCCCCCCchhH------HHhhccccCCCcccCCCCcCHHHHHHHHHHccCCc---ccCCCHH
Confidence 35788999999999999998875432111 11111110 011246677778888888877 4566677
Q ss_pred HHhccCccc
Q psy10243 90 LVRLDLGFM 98 (201)
Q Consensus 90 ~~d~~~~~~ 98 (201)
++ ..|+|+
T Consensus 279 el-l~~~~~ 286 (286)
T cd06638 279 DL-LQHVFI 286 (286)
T ss_pred HH-hhcccC
Confidence 77 666553
No 244
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=61.46 E-value=30 Score=20.12 Aligned_cols=40 Identities=10% Similarity=0.207 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 155 VAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 155 ~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+|...+|..+| .+..++...++.+.. ...++.++.+...
T Consensus 3 ~~d~~~AL~~LG--y~~~e~~~av~~~~~--~~~~~~e~~ik~a 42 (47)
T PF07499_consen 3 LEDALEALISLG--YSKAEAQKAVSKLLE--KPGMDVEELIKQA 42 (47)
T ss_dssp HHHHHHHHHHTT--S-HHHHHHHHHHHHH--STTS-HHHHHHHH
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHhhc--CCCCCHHHHHHHH
Confidence 367888899888 678899999988864 3346677766543
No 245
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=61.25 E-value=11 Score=31.15 Aligned_cols=79 Identities=9% Similarity=-0.080 Sum_probs=49.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc--c----ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH---
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC--N----RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM--- 87 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~----~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~--- 87 (201)
.++.|++++-++.|.+|..|+.......... . ...+..-.-.-...++.+....+.++|..+| ..|..
T Consensus 176 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~ 252 (329)
T cd05588 176 SVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDP---KERLGCHP 252 (329)
T ss_pred ccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCH---HHcCCCCC
Confidence 5788999999999999999986432221110 0 0000000000013488999999999999987 33433
Q ss_pred ---HHHHhccCcccc
Q psy10243 88 ---CGLVRLDLGFMI 99 (201)
Q Consensus 88 ---~~~~d~~~~~~~ 99 (201)
++++ .+|+|+.
T Consensus 253 ~~~~~~i-~~hp~~~ 266 (329)
T cd05588 253 QTGFRDI-KSHPFFR 266 (329)
T ss_pred CCCHHHH-hcCCCCC
Confidence 6777 8999993
No 246
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=61.22 E-value=15 Score=29.71 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=25.5
Q ss_pred CCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 62 RCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 62 ~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+..+.+.++|..+| +.|..+.++ ..|+|+
T Consensus 284 ~~~~~~~~~i~~~l~~~P---~~Rps~~ei-l~~~~f 316 (316)
T cd07842 284 KPDSQGFDLLRKLLEYDP---TKRITAEEA-LEHPYF 316 (316)
T ss_pred CCCHHHHHHHHHHhcCCc---ccCcCHHHH-hcCCCC
Confidence 466778888888888877 567788888 788775
No 247
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=60.91 E-value=11 Score=18.22 Aligned_cols=16 Identities=38% Similarity=0.692 Sum_probs=9.9
Q ss_pred CcCCCcceeHHHHHHH
Q psy10243 146 DKDGDGIINVAELRHV 161 (201)
Q Consensus 146 D~~~~G~Is~~el~~~ 161 (201)
|.|++|.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 5577777777666543
No 248
>KOG1707|consensus
Probab=60.65 E-value=16 Score=33.25 Aligned_cols=65 Identities=22% Similarity=0.350 Sum_probs=44.2
Q ss_pred cccHHHHHHHhhhhCcCCCcceeHHHHHHHHHH-hCCCCCHHHHHHHHHhhC---CCC--CCcccHHHHHH
Q psy10243 132 VESGEELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVAD---QEG--LGYIRYEDFVQ 196 (201)
Q Consensus 132 ~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~-lg~~~s~~ei~~i~~~~d---~~~--~g~I~~~eF~~ 196 (201)
+.....+.++|+..|.|.+|.++-.|+-..=+. .+.++...+++.+-...+ .+| ++.++...|+.
T Consensus 191 p~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLf 261 (625)
T KOG1707|consen 191 PRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLF 261 (625)
T ss_pred HHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHH
Confidence 344677889999999999999999999876544 467777766665544433 222 33455554543
No 249
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=60.63 E-value=9.6 Score=30.87 Aligned_cols=82 Identities=15% Similarity=-0.058 Sum_probs=49.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+.-+..|..|+............+......-.....++......+.+++..+| .-|..+.++ ..|
T Consensus 197 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~Rpt~~~i-l~~ 272 (292)
T cd06658 197 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREP---SQRATAQEL-LQH 272 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCCh---hHCcCHHHH-hhC
Confidence 4578899999999999999988643321110001111111111112367777777777887766 556777888 788
Q ss_pred cccccc
Q psy10243 96 GFMINV 101 (201)
Q Consensus 96 ~~~~~~ 101 (201)
+|+...
T Consensus 273 ~~~~~~ 278 (292)
T cd06658 273 PFLKLA 278 (292)
T ss_pred hhhhcc
Confidence 887543
No 250
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=60.53 E-value=15 Score=28.64 Aligned_cols=72 Identities=11% Similarity=0.013 Sum_probs=46.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
+-++.|++++-++-|..|+.++......... . ..+.- ...++.+....+.+++..+| ..|. .+++
T Consensus 161 ~~~DvwslG~il~el~~g~~~~~~~~~~~~~---~--~~~~~--~~~~~~~~~~li~~~l~~dp---~~R~~~~~~~~~~ 230 (237)
T cd05576 161 EACDWWSLGAILFELLTGKTLVECHPSGINT---H--TTLNI--PEWVSEEARSLLQQLLQFNP---TERLGAGVAGVED 230 (237)
T ss_pred chhhHHHHHHHHHHHHHCcchhhcCchhccc---c--cccCC--cccCCHHHHHHHHHHccCCH---HHhcCCCccchHH
Confidence 4578999999999999999876543322110 0 01111 13378888889999998877 3343 3466
Q ss_pred HhccCccc
Q psy10243 91 VRLDLGFM 98 (201)
Q Consensus 91 ~d~~~~~~ 98 (201)
+ .+|||+
T Consensus 231 ~-~~h~~~ 237 (237)
T cd05576 231 I-KSHPFF 237 (237)
T ss_pred H-HcCCCC
Confidence 6 677764
No 251
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=60.42 E-value=10 Score=31.80 Aligned_cols=80 Identities=9% Similarity=-0.149 Sum_probs=50.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccc------------c---------------------------cccceeecc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDD------------C---------------------------NRRVVQSLI 56 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~---------------------------~~~~~f~~~ 56 (201)
+.++.|++++-+..|.+|-+|+......... . .....+...
T Consensus 204 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (364)
T cd07875 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD 283 (364)
T ss_pred chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccc
Confidence 4578999999999999998887543211000 0 000011111
Q ss_pred cCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 57 ASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 57 ~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
...+...+.+..+.+.++|..+| ..|..+.++ +.|+|+.
T Consensus 284 ~~~~~~~~~~~~dll~~mL~~dP---~~R~t~~e~-L~hp~~~ 322 (364)
T cd07875 284 SEHNKLKASQARDLLSKMLVIDA---SKRISVDEA-LQHPYIN 322 (364)
T ss_pred ccccccccHHHHHHHHHhcCcCc---ccCCCHHHH-hcCcccc
Confidence 11112245677888999999987 568888999 8999985
No 252
>KOG0592|consensus
Probab=60.41 E-value=11 Score=34.00 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=60.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+-++.|+++-.++-|..|-+||....+-.. ..+++- ++- ++ .+.++.+.+.+-+.|..+|+. |...+++ ..
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~Neyli--FqkI~~-l~y-~fp~~fp~~a~dLv~KLLv~dp~~---Rlt~~qI-k~ 337 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLI--FQKIQA-LDY-EFPEGFPEDARDLIKKLLVRDPSD---RLTSQQI-KA 337 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHH--HHHHHH-hcc-cCCCCCCHHHHHHHHHHHccCccc---cccHHHH-hh
Confidence 567899999999999999999997666432 222221 111 22 348899999999999998844 7777888 88
Q ss_pred CccccccccccccHHH
Q psy10243 95 LGFMINVLRFSLTFVN 110 (201)
Q Consensus 95 ~~~~~~~~~g~i~f~e 110 (201)
|+.| ..|+|+.
T Consensus 338 HpFF-----~~Vdw~n 348 (604)
T KOG0592|consen 338 HPFF-----EGVDWEN 348 (604)
T ss_pred Cccc-----ccCChhh
Confidence 8888 6688777
No 253
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=60.11 E-value=9.5 Score=30.98 Aligned_cols=80 Identities=18% Similarity=0.022 Sum_probs=49.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-+.-|..|.+|+......................+..++.+....+.+++..+| +.|..+.++ ..|+
T Consensus 197 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P---~~Rps~~~l-l~~~ 272 (297)
T cd06659 197 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREP---QERATAQEL-LDHP 272 (297)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCc---ccCcCHHHH-hhCh
Confidence 478899999999999999987643211100000000000011123477788888888888877 556778888 7888
Q ss_pred cccc
Q psy10243 97 FMIN 100 (201)
Q Consensus 97 ~~~~ 100 (201)
|+.+
T Consensus 273 ~~~~ 276 (297)
T cd06659 273 FLLQ 276 (297)
T ss_pred hhcc
Confidence 7753
No 254
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=59.93 E-value=7.5 Score=32.00 Aligned_cols=76 Identities=8% Similarity=0.020 Sum_probs=49.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHH-HHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMC-GLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~-~~~d~ 93 (201)
+.++-|++++-++-|.+|..|+......... +.+. ...... ..++.+....+.++|..+| +.|..+ +++ .
T Consensus 175 ~~~DiwslGvil~el~~g~~Pf~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP---~~R~~~~~~~-~ 246 (316)
T cd05620 175 FSVDWWSFGVLLYEMLIGQSPFHGDDEDELF---ESIR-VDTPHYPRWITKESKDILEKLFERDP---TRRLGVVGNI-R 246 (316)
T ss_pred cccchhhhHHHHHHHHhCCCCCCCCCHHHHH---HHHH-hCCCCCCCCCCHHHHHHHHHHccCCH---HHcCCChHHH-H
Confidence 4578999999999999999998754332111 1110 111111 2388899999999998877 445544 466 6
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
+|+|+.
T Consensus 247 ~h~~f~ 252 (316)
T cd05620 247 GHPFFK 252 (316)
T ss_pred cCCCcC
Confidence 899884
No 255
>KOG4004|consensus
Probab=59.84 E-value=3.5 Score=32.27 Aligned_cols=54 Identities=19% Similarity=0.352 Sum_probs=39.3
Q ss_pred hhhhCcCC-CcceeHHHHHHHHHHhCCCCC-HHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 142 FRVFDKDG-DGIINVAELRHVMTNLGEKLT-EEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 142 F~~~D~~~-~G~Is~~el~~~l~~lg~~~s-~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
|-.+|+.. ||++|-.||.-+-. .-++ +.-+..+|..+|.|+||.|+.+||..++
T Consensus 193 f~qld~~p~d~~~sh~el~pl~a---p~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRA---PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCccccccccccccccC---CcccHHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 66667654 99999998865421 1123 3445779999999999999999997654
No 256
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=59.74 E-value=9.8 Score=30.20 Aligned_cols=79 Identities=13% Similarity=0.010 Sum_probs=49.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccc-----------ccccc--------ceeecccCC-------cCCCCHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLD-----------DCNRR--------VVQSLIASE-------WYRCSPDTRR 69 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~--------~~f~~~~~~-------~~~is~~~~~ 69 (201)
+.++.|++++-+.-|..|.+|+........ ..... .-+.+.... ...++.+..+
T Consensus 178 ~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (282)
T cd07831 178 PKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLD 257 (282)
T ss_pred cchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHH
Confidence 458899999999999899998865332100 00000 000000000 0136788889
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.+.++|..+| +.|..+.++ ..|+|+
T Consensus 258 li~~~l~~~P---~~R~~~~~~-l~~~~~ 282 (282)
T cd07831 258 LLKKLLAYDP---DERITAKQA-LRHPYF 282 (282)
T ss_pred HHHHHhccCc---ccccCHHHH-hhCCCC
Confidence 9999999887 567778888 788774
No 257
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=59.63 E-value=9.6 Score=29.81 Aligned_cols=79 Identities=10% Similarity=0.002 Sum_probs=48.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecc--cCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLI--ASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~--~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
.++.|++++-++-+..|..|+............+.+.... ..+...++......+.+++..+| ..|..+.++ ..
T Consensus 180 ~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~R~~~~~l-l~ 255 (264)
T cd06623 180 AADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDP---KKRPSAAEL-LQ 255 (264)
T ss_pred hhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCh---hhCCCHHHH-Hh
Confidence 4788999999998889988876543211111111111111 11112267778888888888766 556778888 78
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
++|+.
T Consensus 256 ~~~~~ 260 (264)
T cd06623 256 HPFIK 260 (264)
T ss_pred CHHHH
Confidence 88774
No 258
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=59.13 E-value=8.9 Score=31.11 Aligned_cols=81 Identities=16% Similarity=-0.006 Sum_probs=50.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+-++-|++++-+..+..|.+|+............+.-..-.-.....++.+....+.+++..+| ..|..+.++ ..|
T Consensus 195 ~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P---~~R~~~~~l-l~~ 270 (292)
T cd06657 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDP---AQRATAAEL-LKH 270 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCc---ccCcCHHHH-hcC
Confidence 4578899999999999999987643321110000000000000113378888888888998877 557788888 888
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 271 ~~~~~ 275 (292)
T cd06657 271 PFLAK 275 (292)
T ss_pred hHHhc
Confidence 88854
No 259
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=58.95 E-value=35 Score=24.18 Aligned_cols=42 Identities=12% Similarity=0.285 Sum_probs=35.0
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
++-++-..++..+|.++++.+|...|..+....+..+++.+.
T Consensus 8 AYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L~ 49 (112)
T PTZ00373 8 AYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSLE 49 (112)
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 344444566777999999999999999999999999999885
No 260
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=58.73 E-value=12 Score=29.37 Aligned_cols=78 Identities=9% Similarity=-0.043 Sum_probs=47.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHH-----HH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFM-----CG 89 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~-----~~ 89 (201)
-++.|++++-+.-+..|..|+......... ..+.... ...... ..++.+....+.+++..+| +.|.. ++
T Consensus 172 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~~~~~ 247 (262)
T cd05572 172 SVDYWSLGILLYELLTGRPPFGEDDEDPME-IYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP---EERLGNLKGGIK 247 (262)
T ss_pred hhhhhhhHHHHHHHHhCCCCcCCCCCCHHH-HHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh---hhCcCCcccCHH
Confidence 368899988888888999988754421111 1111111 111111 2256778888888888776 44555 78
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ .+|+|+.
T Consensus 248 ~l-~~~~~~~ 256 (262)
T cd05572 248 DI-KKHKWFN 256 (262)
T ss_pred HH-hcChhhh
Confidence 88 8899885
No 261
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=58.53 E-value=14 Score=29.21 Aligned_cols=78 Identities=12% Similarity=-0.034 Sum_probs=47.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc---cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++.|++++-+.-+..|..|+............ ..-..+...-...++.+....+.+++..+| +.|..+.++ .
T Consensus 192 ~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~~i-l 267 (272)
T cd06629 192 KVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINP---DNRPTAREL-L 267 (272)
T ss_pred cchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCCh---hhCCCHHHH-h
Confidence 468899988888888899887532221100000 000011111112378888999999998877 557778888 7
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 268 ~~~~~ 272 (272)
T cd06629 268 QHPFI 272 (272)
T ss_pred hCCCC
Confidence 88774
No 262
>KOG0586|consensus
Probab=58.38 E-value=5.7 Score=36.06 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=58.1
Q ss_pred CCcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 15 LPITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
-|--+-|.+.+.++.+.||-|||.+..-+. ...++++-.+.-+ ..+|.+....+-+.|-.+| ..+..++++ ..
T Consensus 233 gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--Lr~rvl~gk~rIp-~~ms~dce~lLrk~lvl~P---skr~~~dqi-m~ 305 (596)
T KOG0586|consen 233 GPEVDIWSLGVVLYALVEGSLPFDGQNLKE--LRPRVLRGKYRIP-FYMSCDCEDLLRKFLVLNP---SKRGPCDQI-MK 305 (596)
T ss_pred CcceehhhhhhhheeeeecccccCCccccc--ccchheeeeeccc-ceeechhHHHHHHhhccCc---cccCCHHHh-hh
Confidence 677788999999999999999998655443 3455655444431 3389999999999998877 457777777 66
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
+.|+.
T Consensus 306 ~~W~n 310 (596)
T KOG0586|consen 306 DRWRN 310 (596)
T ss_pred hcccc
Confidence 77774
No 263
>KOG1955|consensus
Probab=58.30 E-value=30 Score=31.02 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=29.2
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~ 164 (201)
-...++..++++.|.++||-++..||..++.-
T Consensus 262 lpi~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 262 LPIEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred CchHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 55889999999999999999999999999865
No 264
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=58.20 E-value=16 Score=28.47 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-++.+..|..++...... ....+........-.+.++.+....+.+++..+| +.|..+.++ ..||
T Consensus 181 ~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~~l-l~~p 254 (256)
T cd08220 181 KSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDP---SKRPQLSQI-MAQP 254 (256)
T ss_pred ccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCCh---hhCCCHHHH-hhCC
Confidence 478899988888888888877543211 1111111111111123478888899999998876 557777777 6666
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 255 ~~ 256 (256)
T cd08220 255 IC 256 (256)
T ss_pred CC
Confidence 53
No 265
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=58.14 E-value=12 Score=31.09 Aligned_cols=76 Identities=11% Similarity=0.060 Sum_probs=50.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++.|++++-+.-|.+|.+|+........ ...+. ...... ..++.+....+.++|..+| ..|. .+.
T Consensus 174 ~~~DiwslGvil~elltG~~Pf~~~~~~~~---~~~~~-~~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~ 246 (328)
T cd05593 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELIL-MEDIKFPRTLSADAKSLLSGLLIKDP---NKRLGGGPDDAK 246 (328)
T ss_pred ccCCccccchHHHHHhhCCCCCCCCCHHHH---HHHhc-cCCccCCCCCCHHHHHHHHHHcCCCH---HHcCCCCCCCHH
Confidence 457889999999999999999864322111 11111 111111 3488999999999999987 3443 677
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 247 ~i-l~h~~~~ 255 (328)
T cd05593 247 EI-MRHSFFT 255 (328)
T ss_pred HH-hcCCCcC
Confidence 77 7899984
No 266
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=58.00 E-value=7.5 Score=32.07 Aligned_cols=76 Identities=11% Similarity=0.050 Sum_probs=51.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++.|++++-++-|..|..|+......... ..... .... ...++.+..+.+.++|..+| +.|. .+.
T Consensus 174 ~~~DiwSlG~il~elltg~~Pf~~~~~~~~~--~~~~~--~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~ 246 (323)
T cd05571 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF--ELILM--EEIRFPRTLSPEAKSLLAGLLKKDP---KQRLGGGPEDAK 246 (323)
T ss_pred ccccCcccchhhhhhhcCCCCCCCCCHHHHH--HHHHc--CCCCCCCCCCHHHHHHHHHHccCCH---HHcCCCCCCCHH
Confidence 4578899999999999999998643221110 11111 1111 13489999999999999877 4455 678
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 247 ~l-l~h~~f~ 255 (323)
T cd05571 247 EI-MEHRFFA 255 (323)
T ss_pred HH-HcCCCcC
Confidence 88 8999984
No 267
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=57.89 E-value=20 Score=29.93 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+..+.+.++|..+| +.|..+.++ +.|+|+.
T Consensus 283 ~~~~~~~li~~mL~~dP---~~Rps~~el-l~hp~~~ 315 (355)
T cd07874 283 KASQARDLLSKMLVIDP---AKRISVDEA-LQHPYIN 315 (355)
T ss_pred cchHHHHHHHHHhcCCc---hhcCCHHHH-hcCcchh
Confidence 55677888888998887 678899999 9999984
No 268
>COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair]
Probab=57.71 E-value=66 Score=27.56 Aligned_cols=46 Identities=9% Similarity=-0.084 Sum_probs=33.9
Q ss_pred cceeecccCCcCC-CCHHHHHHHHHHhCCCC-----------ChhHHHHHHHHHhccC
Q psy10243 50 RVVQSLIASEWYR-CSPDTRRCLLMTLRQAQ-----------MPGHLRFMCGLVRLDL 95 (201)
Q Consensus 50 ~~~f~~~~~~~~~-is~~~~~~il~~L~~~~-----------s~~~~~~~~~~~d~~~ 95 (201)
.-+|+....+.++ ++.+++..+....|... ..+++..++..++..+
T Consensus 168 fFvFDire~~tgr~Lp~eer~~l~ekYgl~~V~~fg~~~~~e~~eei~eIve~L~keG 225 (382)
T COG1423 168 FFVFDIREKNTGRPLPVEERLELAEKYGLPHVEIFGEFPADEAGEEIYEIVERLNKEG 225 (382)
T ss_pred EEEEEEEecCCCCCCCHHHHHHHHHHcCCCceEEeeeechhHhHHHHHHHHHHHhhcC
Confidence 3468877776666 99999999988877641 1146788888887665
No 269
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=57.68 E-value=11 Score=31.12 Aligned_cols=76 Identities=7% Similarity=-0.015 Sum_probs=48.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHHH-HHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMCG-LVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~~-~~d~ 93 (201)
+.++.|++++-+.-|..|..|+......... +.+ ....... ..++.+..+.+.++|..+| +-|..+. ++ .
T Consensus 175 ~~~DvwslG~il~el~~G~~pf~~~~~~~~~---~~i-~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~l-~ 246 (316)
T cd05619 175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELF---QSI-RMDNPCYPRWLTREAKDILVKLFVREP---ERRLGVKGDI-R 246 (316)
T ss_pred chhhhhhHHHHHHHHHhCCCCCCCCCHHHHH---HHH-HhCCCCCCccCCHHHHHHHHHHhccCH---hhcCCChHHH-H
Confidence 3578999999999999999998653321111 111 0111111 2388899999999999877 4454443 56 7
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|+|+.
T Consensus 247 ~h~~~~ 252 (316)
T cd05619 247 QHPFFR 252 (316)
T ss_pred cCcccC
Confidence 888883
No 270
>KOG3555|consensus
Probab=57.36 E-value=15 Score=31.24 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=34.1
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHH
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAM 177 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i 177 (201)
..+.-++..|..+|...+|.|+..|.-..+...+ ++-..+...+
T Consensus 279 knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~-~pc~~e~~ri 322 (434)
T KOG3555|consen 279 KNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD-PPCQAELCRI 322 (434)
T ss_pred CchhHHHHHHhhhcccccCccccchhhhhhccCC-CccccHHHHH
Confidence 5567788899999999999999999999988766 3334444433
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=57.00 E-value=3.3 Score=34.26 Aligned_cols=78 Identities=10% Similarity=0.019 Sum_probs=50.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH----HHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF----MCGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~----~~~~~ 91 (201)
+.++.|++++-++-|.+|..|+........ ..........-....++.+...++.++|..+| ..|. .+.++
T Consensus 176 ~~~DvwslGvil~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P---~~R~~~~~~~~~l 250 (330)
T cd05586 176 KHVDFWSLGVLVFEMCCGWSPFYAEDTQQM--YRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNP---QHRLGAHRDAVEL 250 (330)
T ss_pred CccceeccccEEEEeccCCCCCCCCCHHHH--HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCH---HHCCCCCCCHHHH
Confidence 457899999999999999999865332111 01111111111223478899999999999877 3343 56777
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
..|+|+.
T Consensus 251 -l~h~~~~ 257 (330)
T cd05586 251 -KEHPFFA 257 (330)
T ss_pred -hcCcccc
Confidence 7899984
No 272
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=56.98 E-value=9 Score=30.83 Aligned_cols=81 Identities=12% Similarity=-0.026 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc---------------------ccee-----ecccCCcCCCCHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---------------------RVVQ-----SLIASEWYRCSPDTRR 69 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~~~f-----~~~~~~~~~is~~~~~ 69 (201)
+.++.|++++-+.-|..|.+|+...++....... +..+ .........++.+..+
T Consensus 183 ~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (294)
T PLN00009 183 TPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVD 262 (294)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHH
Confidence 3477899999999898999888643321100000 0000 0000011347888899
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
.+.++|..+| +.|..+.++ ..|+|+.+
T Consensus 263 ~i~~~l~~~P---~~Rps~~~~-l~~~~~~~ 289 (294)
T PLN00009 263 LLSKMLRLDP---SKRITARAA-LEHEYFKD 289 (294)
T ss_pred HHHHHccCCh---hhCcCHHHH-hcCchHhH
Confidence 9999999977 667788888 88888853
No 273
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=56.89 E-value=14 Score=30.49 Aligned_cols=76 Identities=12% Similarity=-0.086 Sum_probs=49.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGLV 91 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~~ 91 (201)
.++.|++++.++-|.+|..|+......... ..+..-...-...++.+....+.++|..+| ..|. .+.++
T Consensus 181 ~~DiwslG~il~el~~G~~pf~~~~~~~~~---~~i~~~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~~l 254 (324)
T cd05589 181 AVDWWGLGVLIYEMLVGESPFPGDDEEEVF---DSIVNDEVRYPRFLSREAISIMRRLLRRNP---ERRLGSGEKDAEDV 254 (324)
T ss_pred ccchhhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhCCCCCCCCCCHHHHHHHHHHhhcCH---hHcCCCCCCCHHHH
Confidence 468899999999999999998653321110 111110011112388899999999999877 3343 56777
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
..|+|+.
T Consensus 255 -~~~~~f~ 261 (324)
T cd05589 255 -KKQPFFR 261 (324)
T ss_pred -hhCCCcC
Confidence 7888883
No 274
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=56.80 E-value=11 Score=27.68 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=28.5
Q ss_pred CcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCC-------CCCcccHHHHHHHHh
Q psy10243 150 DGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE-------GLGYIRYEDFVQVML 199 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~-------~~g~I~~~eF~~~l~ 199 (201)
-+.||+.||.++-+.+- .+...++.+++++..+ ..+.|+|+.|..+|.
T Consensus 5 ~~~lsp~eF~qLq~y~e--ys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~ 59 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSE--YSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMK 59 (138)
T ss_dssp -S-S-HHHHHHHHHHHH--H----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHH
Confidence 46789999988765543 2455677778777433 356899999988875
No 275
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=56.07 E-value=12 Score=30.88 Aligned_cols=76 Identities=11% Similarity=-0.104 Sum_probs=48.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
+.++.|++++-++.|.+|.+|+........ ...+......-...++.+....+.++|..+| ..|. ..++
T Consensus 180 ~~~DiwslGvil~elltG~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~~~~~ 253 (324)
T cd05587 180 KSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---FQSIMEHNVSYPKSLSKEAVSICKGLLTKHP---AKRLGCGPTGERD 253 (324)
T ss_pred cccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCH---HHcCCCCCCCHHH
Confidence 356899999999999999999864432111 1111111111123489999999999999877 3332 3356
Q ss_pred HhccCccc
Q psy10243 91 VRLDLGFM 98 (201)
Q Consensus 91 ~d~~~~~~ 98 (201)
+ ..|+|+
T Consensus 254 ~-~~hp~~ 260 (324)
T cd05587 254 I-REHAFF 260 (324)
T ss_pred H-hcCCCc
Confidence 6 788888
No 276
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=56.00 E-value=9.9 Score=30.59 Aligned_cols=80 Identities=15% Similarity=-0.003 Sum_probs=49.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH-----HH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM-----CG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~-----~~ 89 (201)
+-++-|++++-+.-+..|.+|+............ ..+......-...++.+..+.+.+++..+| +.|.. +.
T Consensus 180 ~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~~~~ 256 (285)
T cd05632 180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDP---KQRLGCQEEGAG 256 (285)
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCH---hHcCCCcccChH
Confidence 4468899999999899999998754332111111 111221222224488888888888988876 44444 56
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 257 ~l-~~~~~~~ 265 (285)
T cd05632 257 EV-KRHPFFR 265 (285)
T ss_pred HH-HcChhhh
Confidence 66 7777773
No 277
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=55.64 E-value=9.9 Score=30.25 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=48.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc-----------cceee---c------c--------cCCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-----------RVVQS---L------I--------ASEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~f~---~------~--------~~~~~~is~~~~ 68 (201)
.++.|++++-+.-|..|.+|+............ +.++. + . ......++.+..
T Consensus 181 ~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (286)
T cd07847 181 PVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPAL 260 (286)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHH
Confidence 578899999999999999887543221000000 00000 0 0 000134678888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+++.+++..+| +.|..+.++ ..|+|+
T Consensus 261 ~li~~~l~~~p---~~Rp~~~ei-l~~~~f 286 (286)
T cd07847 261 SFLKGCLQMDP---TERLSCEEL-LEHPYF 286 (286)
T ss_pred HHHHHHhcCCc---cccCCHHHH-hcCCCC
Confidence 89999998877 567788888 777764
No 278
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=55.52 E-value=59 Score=24.90 Aligned_cols=136 Identities=14% Similarity=0.136 Sum_probs=71.3
Q ss_pred eecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC--ccccccccccccHHHHHHHHHHHHHhhhh----h
Q psy10243 53 QSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL--GFMINVLRFSLTFVNFVMITLSGCLKMYN----T 125 (201)
Q Consensus 53 f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~--~~~~~~~~g~i~f~eF~~~~~~~~~~~~~----~ 125 (201)
..|.|.+.++ |.+-+--..++.||..+ -......-+ ++. ++... .+-+. .-+.++.+...-+... .
T Consensus 13 vaFFDrd~DGiI~P~dTy~GFraLGf~~---~~s~~aa~~-I~~~lSy~T~--~~w~p-~P~f~Iyi~nIhk~kHGSDSg 85 (174)
T PF05042_consen 13 VAFFDRDKDGIIYPWDTYQGFRALGFGI---LLSLLAAFI-IHGALSYPTQ--PSWIP-DPFFRIYIKNIHKGKHGSDSG 85 (174)
T ss_pred hceeCCCCCeeECHHHHHHHHHHhCCCH---HHHHHHHHH-HHcccCCccC--CCCCC-CCceeEEeecccccccCCCcc
Confidence 3456666677 99999999999999976 222222222 111 10000 00000 0011111100000000 0
Q ss_pred hhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCC-------CCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 126 EYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEK-------LTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 126 ~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~-------~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
..........++..++|..+++.+.+.+|..|+..+++.-... .+.-|...+...+ .+.+|.+.-++-..
T Consensus 86 ~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~ 162 (174)
T PF05042_consen 86 AYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRG 162 (174)
T ss_pred ccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhh
Confidence 0001112347789999999999999999999999998762111 1223333344333 46788887776544
No 279
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=55.44 E-value=76 Score=22.86 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=52.9
Q ss_pred ccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCC--CcceeHHHHHHHHHHhC-------CCCCH---
Q psy10243 104 FSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDG--DGIINVAELRHVMTNLG-------EKLTE--- 171 (201)
Q Consensus 104 g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~--~G~Is~~el~~~l~~lg-------~~~s~--- 171 (201)
..|-|..|...+.-.+++..- .-..-....+.++|+....+. +..++..++..++..+- ....+
T Consensus 13 n~IrfsaYRtA~KLR~lQk~~----~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~ 88 (127)
T PF09068_consen 13 NNIRFSAYRTAMKLRFLQKRL----CLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPS 88 (127)
T ss_dssp TT-SSHHHHHHHHHHHHHHHT----TGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-
T ss_pred hhHHHHHhHHHHHHHHHHHHH----hheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 346677777766544443111 112234667788898876655 46799999999988753 11111
Q ss_pred --------HHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 172 --------EEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 172 --------~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
--+..+++.+|+++.|+|+--.|...+
T Consensus 89 ~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL 123 (127)
T PF09068_consen 89 RPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKVAL 123 (127)
T ss_dssp ----HHHHHHHHHHHHHH-TT--SEEEHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhCCCCCCeeehhHHHHHH
Confidence 123568888999999999988886654
No 280
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=54.99 E-value=19 Score=23.43 Aligned_cols=26 Identities=15% Similarity=0.356 Sum_probs=19.6
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 173 EVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 173 ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+|..+|..+.. +.+.|+.++|..+|.
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~ 26 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLR 26 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHH
Confidence 46778888864 677888888888774
No 281
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=54.71 E-value=30 Score=21.92 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=29.1
Q ss_pred CcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 150 DGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
+-.|+.+-++..+...|..+|+..++.+++.+.
T Consensus 29 NPpine~mir~M~~QMG~kpSekqi~Q~m~~mk 61 (64)
T PF03672_consen 29 NPPINEKMIRAMMMQMGRKPSEKQIKQMMRSMK 61 (64)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 446899999999999999999999999988764
No 282
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=54.63 E-value=6.9 Score=33.20 Aligned_cols=83 Identities=12% Similarity=-0.081 Sum_probs=50.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++.|++++-+.-|.+|.+|+...+....-... .....+.-..+..+|.+....+.++|.. +....-+..+.++ .+
T Consensus 226 ~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~-~~~r~~r~~~~ei-~~ 303 (371)
T cd05622 226 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTD-REVRLGRNGVEEI-KR 303 (371)
T ss_pred CccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCC-hhhhcCCCCHHHH-hc
Confidence 4578999999999999999999754432111000 0000111122345899999999888863 2111124467777 78
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|+|+.+
T Consensus 304 h~~~~~ 309 (371)
T cd05622 304 HLFFKN 309 (371)
T ss_pred CcccCC
Confidence 888843
No 283
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=54.60 E-value=16 Score=30.15 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
++++..+++.++|..+| +.|..++++ ..|+|+.+
T Consensus 279 ~~~~~~~li~~~l~~dP---~~Rpt~~el-l~~p~f~~ 312 (327)
T cd08227 279 FSPHFHHFVEQCLQRNP---DARPSASTL-LNHSFFKQ 312 (327)
T ss_pred cCHHHHHHHHHHHhhCc---hhcCCHHHH-hcChhhhh
Confidence 56778888999999887 778999999 89998853
No 284
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=54.41 E-value=12 Score=30.84 Aligned_cols=85 Identities=7% Similarity=-0.098 Sum_probs=53.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH-----HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~~ 90 (201)
+.++.|++++-++-|..|..|+........ ...+....-.-...++.+....+.++|..+| +.|. ...+
T Consensus 180 ~~~DiwSlGvil~elltg~~Pf~~~~~~~~---~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p---~~R~~~~~~~~~~ 253 (323)
T cd05616 180 KSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVAYPKSMSKEAVAICKGLMTKHP---GKRLGCGPEGERD 253 (323)
T ss_pred CccchhchhHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCCCCCcCCHHHHHHHHHHcccCH---HhcCCCCCCCHHH
Confidence 457899999999999999999875432211 1111111111112389999999999998876 3332 2456
Q ss_pred HhccCccccccccccccHHHHH
Q psy10243 91 VRLDLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 91 ~d~~~~~~~~~~~g~i~f~eF~ 112 (201)
+ ..|+|+ ..+++....
T Consensus 254 i-~~h~~~-----~~~~~~~~~ 269 (323)
T cd05616 254 I-KEHAFF-----RYIDWEKLE 269 (323)
T ss_pred H-hcCCCc-----CCCCHHHHH
Confidence 6 688888 345555443
No 285
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=54.37 E-value=16 Score=29.92 Aligned_cols=80 Identities=10% Similarity=-0.090 Sum_probs=51.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+.-|..|++|+............. ...........++.+....+.+++..+| ..|..+.++ ..|+
T Consensus 200 ~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~P---~~Rp~~~~~-l~~~ 274 (313)
T cd06633 200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNDSPTLQSNEWTDSFRGFVDYCLQKIP---QERPASAEL-LRHD 274 (313)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hcCCCCCCccccCHHHHHHHHHHccCCh---hhCcCHHHH-hcCc
Confidence 4688999999999999998876432211110000 0001111123366777888888998877 668888888 8999
Q ss_pred ccccc
Q psy10243 97 FMINV 101 (201)
Q Consensus 97 ~~~~~ 101 (201)
|+...
T Consensus 275 ~~~~~ 279 (313)
T cd06633 275 FVRRD 279 (313)
T ss_pred ccCCC
Confidence 98643
No 286
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=54.28 E-value=17 Score=28.52 Aligned_cols=76 Identities=12% Similarity=-0.043 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-.+.|++++-+.-+.+|..++...... ....+........-...++.+..+.+.+++..+| +.|..+.++ ..|+
T Consensus 185 ~~Dv~slG~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~~~ 258 (260)
T cd08222 185 KSDIWSLGCILYEMCCLAHAFEGQNFL--SVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDP---SLRPSAAEI-LRNP 258 (260)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCCh---hhCcCHHHH-hhCC
Confidence 368888988888888998887532211 1011111000111112367788888888888876 667778888 7777
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 259 ~~ 260 (260)
T cd08222 259 FI 260 (260)
T ss_pred CC
Confidence 74
No 287
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=54.26 E-value=14 Score=33.27 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=52.3
Q ss_pred cchhHHHHHHHHhHhcCCc-ceeeecccc-------cccc-----ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhH
Q psy10243 17 ITQRVTILIEFIFINVGYL-HLTLESEKL-------DDCN-----RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGH 83 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-------~~~~-----~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~ 83 (201)
..+.|++++-++-|.+|.+ ++....... .... .....++ ..++.++...++.+.++|...+....
T Consensus 412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~ 489 (507)
T PLN03224 412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF--SLLDRNKEAGWDLACKLITKRDQANR 489 (507)
T ss_pred ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc--ccccccChHHHHHHHHHhccCCCCcc
Confidence 4589999999999988865 443111000 0000 0111222 23567899999999999987654335
Q ss_pred HHHHHHHHhccCcccc
Q psy10243 84 LRFMCGLVRLDLGFMI 99 (201)
Q Consensus 84 ~~~~~~~~d~~~~~~~ 99 (201)
-|.+++++ ++|+|+.
T Consensus 490 ~RlSa~ea-L~Hp~f~ 504 (507)
T PLN03224 490 GRLSVGQA-LSHRFFL 504 (507)
T ss_pred cCCCHHHH-hCCCCcC
Confidence 78899999 9999984
No 288
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=54.23 E-value=23 Score=28.38 Aligned_cols=79 Identities=9% Similarity=-0.074 Sum_probs=48.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccc------------ccc---------------cceeecccCCcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDD------------CNR---------------RVVQSLIASEWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~~~---------------~~~f~~~~~~~~~is~~~~ 68 (201)
+.++.|++++-+.-+..|.+|+......... ... +.........+..++.+..
T Consensus 197 ~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (302)
T cd07864 197 PAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPAL 276 (302)
T ss_pred chhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHH
Confidence 4578899988888888999888643321000 000 0000011112334788888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.++|..+| ..|..+.++ ..++|+
T Consensus 277 ~li~~~l~~~P---~~Rp~~~~i-l~~~~~ 302 (302)
T cd07864 277 DLLDHMLTLDP---SKRCTAEEA-LNSPWL 302 (302)
T ss_pred HHHHHHccCCh---hhCCCHHHH-hcCCCC
Confidence 88999998877 556777777 777764
No 289
>PF08461 HTH_12: Ribonuclease R winged-helix domain; InterPro: IPR013668 This domain is found at the amino terminus of Ribonuclease R and a number of presumed transcriptional regulatory proteins from archaea.
Probab=54.23 E-value=17 Score=22.93 Aligned_cols=38 Identities=24% Similarity=0.407 Sum_probs=32.8
Q ss_pred CCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCC
Q psy10243 148 DGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEG 185 (201)
Q Consensus 148 ~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~ 185 (201)
..++.++...+.+.|..-|..++++.+..-++.++.+|
T Consensus 9 ~~~~P~g~~~l~~~L~~~g~~~se~avRrrLr~me~~G 46 (66)
T PF08461_consen 9 ESDKPLGRKQLAEELKLRGEELSEEAVRRRLRAMERDG 46 (66)
T ss_pred HcCCCCCHHHHHHHHHhcChhhhHHHHHHHHHHHHHCC
Confidence 35678999999999999899999999999999987654
No 290
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=54.21 E-value=15 Score=28.63 Aligned_cols=74 Identities=11% Similarity=-0.047 Sum_probs=45.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+..|..|..|+........ .+.+....-.. ...++.+....+.+++..+| .-|..+.++ ..|
T Consensus 190 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p---~~Rp~~~~i-l~~ 262 (265)
T cd08217 190 KSDIWSLGCLIYELCALSPPFTARNQLQL---ASKIKEGKFRRIPYRYSSELNEVIKSMLNVDP---DKRPSTEEL-LQL 262 (265)
T ss_pred hhHHHHHHHHHHHHHHCCCcccCcCHHHH---HHHHhcCCCCCCccccCHHHHHHHHHHccCCc---ccCCCHHHH-hhC
Confidence 36889999999999999998875431110 11111111111 12367888888888888876 446667776 666
Q ss_pred cc
Q psy10243 96 GF 97 (201)
Q Consensus 96 ~~ 97 (201)
||
T Consensus 263 ~~ 264 (265)
T cd08217 263 PL 264 (265)
T ss_pred CC
Confidence 54
No 291
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=54.03 E-value=9.6 Score=31.55 Aligned_cols=78 Identities=9% Similarity=-0.048 Sum_probs=50.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhH---HHHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGH---LRFMCGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~---~~~~~~~~ 91 (201)
+.++.|++++-++-|..|..|+...+.... .+.+.. ..... ..++.+....+.++|..+|+. . ++..++++
T Consensus 194 ~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~i~~-~~~~~p~~~~~~~~~li~~~L~~dP~~-R~~~~~~~~~~l 268 (329)
T PTZ00263 194 KAVDWWTMGVLLYEFIAGYPPFFDDTPFRI---YEKILA-GRLKFPNWFDGRARDLVKGLLQTDHTK-RLGTLKGGVADV 268 (329)
T ss_pred CcceeechHHHHHHHHcCCCCCCCCCHHHH---HHHHhc-CCcCCCCCCCHHHHHHHHHHhhcCHHH-cCCCCCCCHHHH
Confidence 457889999999999999999864332111 011110 01111 238888999999999987732 1 11347888
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
..|+|+.
T Consensus 269 -l~hp~f~ 275 (329)
T PTZ00263 269 -KNHPYFH 275 (329)
T ss_pred -hcCCccC
Confidence 8999994
No 292
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=53.66 E-value=23 Score=29.78 Aligned_cols=81 Identities=7% Similarity=-0.112 Sum_probs=51.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc--------------------ceee-ccc--------CCcCCCCHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR--------------------VVQS-LIA--------SEWYRCSPD 66 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------------~~f~-~~~--------~~~~~is~~ 66 (201)
+.++.|++++-+.-|..|.+|+............. .+.. ... .-....+.+
T Consensus 184 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
T cd07853 184 SAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHE 263 (372)
T ss_pred cHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHH
Confidence 34789999999999999998875432110000000 0000 000 001236788
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
..+++.++|..+| +.|..+.++ +.|+|+..
T Consensus 264 ~~~li~~mL~~dP---~~R~t~~e~-l~hp~~~~ 293 (372)
T cd07853 264 AVHLLCRMLVFDP---DKRISAADA-LAHPYLDE 293 (372)
T ss_pred HHHHHHHhCCCCh---hhCcCHHHH-hcCHhhCC
Confidence 8999999999988 678889999 99999853
No 293
>cd08315 Death_TRAILR_DR4_DR5 Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors. Death Domain (DD) found in Tumor necrosis factor-Related Apoptosis-Inducing Ligand (TRAIL) Receptors. In mammals, this family includes TRAILR1 (also called DR4 or TNFRSF10A) and TRAILR2 (also called DR5, TNFRSF10B, or KILLER). They function as receptors for the cytokine TRAIL and are involved in apoptosis signaling pathways. TRAIL preferentially induces apoptosis in cancer cells while exhibiting little toxicity in normal cells. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=53.40 E-value=70 Score=21.82 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=18.9
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHH
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMI 178 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~ 178 (201)
=|...|.++|..+|.....+.++..+
T Consensus 65 At~~~L~~aL~~~~~~~~Ae~I~~~l 90 (96)
T cd08315 65 ASVNTLLDALEAIGLRLAKESIQDEL 90 (96)
T ss_pred cHHHHHHHHHHHcccccHHHHHHHHH
Confidence 46788888888888777777666543
No 294
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=53.35 E-value=11 Score=31.17 Aligned_cols=80 Identities=10% Similarity=-0.048 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccc------------cccc--------ccc----ee----ecccCCcCCCCHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKL------------DDCN--------RRV----VQ----SLIASEWYRCSPDT 67 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~--------~~~----~f----~~~~~~~~~is~~~ 67 (201)
+.++.|++++-+..|..|.+|+....... .... .+. +. .-....+..++.+.
T Consensus 188 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (337)
T cd07858 188 TAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLA 267 (337)
T ss_pred CcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHH
Confidence 45788999999999999998875321100 0000 000 00 00001123488888
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 68 RRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 68 ~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+.++|..+| +.|..++++ ..|+|+.
T Consensus 268 ~~li~~~l~~~P---~~Rps~~el-l~h~~~~ 295 (337)
T cd07858 268 IDLLEKMLVFDP---SKRITVEEA-LAHPYLA 295 (337)
T ss_pred HHHHHHHhcCCh---hhccCHHHH-HcCcchh
Confidence 999999999987 668889999 8998884
No 295
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=53.13 E-value=6.3 Score=33.46 Aligned_cols=83 Identities=13% Similarity=-0.056 Sum_probs=50.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc-ceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR-VVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
..++.|++++-++-|.+|.+||...+......... ....+.-..+..++......+.++|...+.+ --|..+.++ ..
T Consensus 226 ~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r-~~R~~~~e~-l~ 303 (370)
T cd05621 226 RECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVR-LGRNGVEEI-KQ 303 (370)
T ss_pred cccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhc-cCCCCHHHH-hc
Confidence 45888999999999999999997544321111100 0011111222347888888888888632211 114567888 88
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|+|+..
T Consensus 304 hp~~~~ 309 (370)
T cd05621 304 HPFFKN 309 (370)
T ss_pred CcccCC
Confidence 999954
No 296
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=52.94 E-value=17 Score=28.32 Aligned_cols=75 Identities=7% Similarity=-0.089 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+..|.+|..|+........ ..+........-...++.+....+.+++..+| +-|..+.++ ..++
T Consensus 181 ~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rp~~~~l-l~~~ 254 (256)
T cd08529 181 KSDVWALGVVLYECCTGKHPFDANNQGAL--ILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDY---RQRPDTFQL-LRNP 254 (256)
T ss_pred ccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHcCCCCCCccccCHHHHHHHHHHccCCc---ccCcCHHHH-hhCC
Confidence 47889999999999999999865442111 11111111111112477888888888988877 446666666 5555
Q ss_pred c
Q psy10243 97 F 97 (201)
Q Consensus 97 ~ 97 (201)
|
T Consensus 255 ~ 255 (256)
T cd08529 255 S 255 (256)
T ss_pred C
Confidence 4
No 297
>PF01885 PTS_2-RNA: RNA 2'-phosphotransferase, Tpt1 / KptA family; InterPro: IPR002745 The final step of tRNA splicing in Saccharomyces cerevisiae (Baker's yeast) requires 2'-phosphotransferase (Tpt1) to transfer the 2'-phosphate from ligated tRNA to NAD, producing mature tRNA and ADP ribose-1' '-2' '-cyclic phosphate. Yeast and Mus musculus (Mouse) Tpt1 protein and bacterial KptA protein can catalyze the conversion of the generated intermediate to both product and the original substrate, these enzymes likely use the same reaction mechanism. Step 1 of this reaction is strikingly similar to the ADP-ribosylation of proteins catalyzed by a number of bacterial toxins. KptA, a functional Tpt1 protein homologue from Escherichia coli is strikingly similar to yeast Tpt1 in its kinetic parameters, although E. coli is not known to have a 2'-phosphorylated RNA substrate [,].; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation; PDB: 1WFX_A.
Probab=52.84 E-value=29 Score=26.82 Aligned_cols=37 Identities=27% Similarity=0.401 Sum_probs=25.5
Q ss_pred CcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 146 DKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 146 D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
..+.+|+++.+||.+.+..-+..++.+++.+++..-+
T Consensus 26 ~~d~~G~v~v~dLL~~~~~~~~~~t~~~i~~vV~~~~ 62 (186)
T PF01885_consen 26 VMDPDGWVSVDDLLRALRFKGLWVTEEDIREVVETDD 62 (186)
T ss_dssp ---TT--EEHHHHHHHHHHT-TT--HHHHHHHHHH-S
T ss_pred ccCCCCCEeHHHHHHHHHHcCCCCCHHHHHHHHhhCC
Confidence 4678999999999999988888899999999998755
No 298
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=52.42 E-value=12 Score=31.13 Aligned_cols=81 Identities=9% Similarity=-0.083 Sum_probs=49.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccc------------cc--------ccc----eeecc----cCCcCCCCHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDD------------CN--------RRV----VQSLI----ASEWYRCSPDT 67 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~~--------~~~----~f~~~----~~~~~~is~~~ 67 (201)
..++-|++++-+..|.+|+.|+......... .. .+. +-... .....+.++..
T Consensus 195 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (343)
T cd07878 195 QTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLA 274 (343)
T ss_pred chhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHH
Confidence 3578999999999999999888532210000 00 000 00000 00012356667
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 68 RRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 68 ~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
.+.+.++|..+| ..|..+.++ +.|+|+..
T Consensus 275 ~~li~~mL~~dp---~~R~s~~el-l~hp~~~~ 303 (343)
T cd07878 275 IDLLEKMLVLDS---DKRISASEA-LAHPYFSQ 303 (343)
T ss_pred HHHHHHHcCCCh---hhCCCHHHH-hcCcchhc
Confidence 788888888877 668888898 89999854
No 299
>TIGR01639 P_fal_TIGR01639 Plasmodium falciparum uncharacterized domain TIGR01639. This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.
Probab=52.15 E-value=34 Score=21.25 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=27.5
Q ss_pred cceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 151 GIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 151 G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
-.+|.+|+...+..++..++.+++-.++..+-
T Consensus 8 ~~lTeEEl~~~i~~L~~~~~~~dm~~IW~~v~ 39 (61)
T TIGR01639 8 KKLSKEELNELINSLDEIPNRNDMLIIWNQVH 39 (61)
T ss_pred HHccHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 45889999999999999999999888888764
No 300
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=51.97 E-value=15 Score=29.65 Aligned_cols=79 Identities=10% Similarity=-0.115 Sum_probs=47.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc-----------------cee---ecc--------cCCcCC-CCHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR-----------------VVQ---SLI--------ASEWYR-CSPD 66 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------------~~f---~~~--------~~~~~~-is~~ 66 (201)
+.++-|++++-++-|.+|++++............. ..+ .+. ..-+.. .+..
T Consensus 203 ~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 282 (310)
T cd07865 203 PPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPH 282 (310)
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHH
Confidence 35788999888888889998876433210000000 000 000 000111 3567
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+.++|..+| +-|..++++ +.|+|+
T Consensus 283 ~~dli~~~l~~~P---~~R~t~~e~-l~h~~f 310 (310)
T cd07865 283 ALDLIDKLLVLDP---AKRIDADTA-LNHDFF 310 (310)
T ss_pred HHHHHHHHhcCCh---hhccCHHHH-hcCCCC
Confidence 7788888998877 667888888 888875
No 301
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=51.94 E-value=18 Score=28.37 Aligned_cols=80 Identities=13% Similarity=-0.005 Sum_probs=48.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH---HHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF---MCGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~---~~~~~ 91 (201)
+.++-|++++-+.-+..|.+|+............ .............++.+....+.+++..+| +.|. .+.++
T Consensus 172 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~~~~~ 248 (260)
T cd05611 172 KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDP---AKRLGANGYQEI 248 (260)
T ss_pred chhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCH---HHccCCCcHHHH
Confidence 3567888988888888999998643321110000 001111111122478899999999998877 4454 44666
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
..|+|+.
T Consensus 249 -l~~~~~~ 255 (260)
T cd05611 249 -KSHPFFK 255 (260)
T ss_pred -HcChHhh
Confidence 7888874
No 302
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=51.71 E-value=14 Score=29.22 Aligned_cols=75 Identities=13% Similarity=-0.030 Sum_probs=46.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH----HHHh
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC----GLVR 92 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~----~~~d 92 (201)
.++.|++++-+.-+..|..|+...+..... +.+......-...++.....++.++|..+| .-|..+ .++
T Consensus 202 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~~~~~~~~~l- 274 (280)
T cd05581 202 SSDLWALGCIIYQMLTGKPPFRGSNEYLTF---QKILKLEYSFPPNFPPDAKDLIEKLLVLDP---QDRLGVNEGYDEL- 274 (280)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCccHHHHH---HHHHhcCCCCCCccCHHHHHHHHHHhcCCH---hhCCCcccCHHHH-
Confidence 477888887788888899998755432111 111111111113478888889999998876 446666 676
Q ss_pred ccCccc
Q psy10243 93 LDLGFM 98 (201)
Q Consensus 93 ~~~~~~ 98 (201)
+.|+|+
T Consensus 275 l~~~~~ 280 (280)
T cd05581 275 KAHPFF 280 (280)
T ss_pred hcCCCC
Confidence 677664
No 303
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=51.60 E-value=22 Score=29.50 Aligned_cols=37 Identities=8% Similarity=-0.038 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccccccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLR 103 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~ 103 (201)
.+.+..+++.++|..+| +.|..+.++ ..|+|+.....
T Consensus 271 ~~~~~~~li~~~L~~~P---~~Rpt~~el-l~h~~~~~~~~ 307 (333)
T cd06650 271 FGAEFQDFVNKCLIKNP---AERADLKQL-MVHAFIKRSEA 307 (333)
T ss_pred cCHHHHHHHHHhccCCc---ccCcCHHHH-hhCHHHhcCcc
Confidence 56777888888999888 567888888 88988865433
No 304
>cd05833 Ribosomal_P2 Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2
Probab=51.59 E-value=53 Score=23.08 Aligned_cols=51 Identities=14% Similarity=0.363 Sum_probs=39.3
Q ss_pred HhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 141 AFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 141 ~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
++-++-..++..+|.++++.+|+..|..+....+..+++.+.. .+.++.+.
T Consensus 6 AylL~~l~g~~~pTa~dI~~IL~AaGveVe~~~~~lf~~~L~G-----Kdi~eLIa 56 (109)
T cd05833 6 AYLLAVLGGNASPSAADVKKILGSVGVEVDDEKLNKVISELEG-----KDVEELIA 56 (109)
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHcC-----CCHHHHHH
Confidence 3444555677789999999999999999999999999988852 44555544
No 305
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=51.35 E-value=15 Score=30.01 Aligned_cols=77 Identities=12% Similarity=-0.043 Sum_probs=50.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHH---HHHHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRF---MCGLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~---~~~~~d 92 (201)
+.++.|++++-++-|..|.+|+........ .+.+..-.-.-...++.+..+.+.++|..+| ..|. .+.++
T Consensus 172 ~~~DvwslGvil~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp---~~R~~~~~~~e~- 244 (312)
T cd05585 172 KAVDWWTLGVLLYEMLTGLPPFYDENVNEM---YRKILQEPLRFPDGFDRDAKDLLIGLLSRDP---TRRLGYNGAQEI- 244 (312)
T ss_pred CccceechhHHHHHHHhCCCCcCCCCHHHH---HHHHHcCCCCCCCcCCHHHHHHHHHHcCCCH---HHcCCCCCHHHH-
Confidence 347889999999999999999864332111 1111110111123488999999999999877 3442 46777
Q ss_pred ccCcccc
Q psy10243 93 LDLGFMI 99 (201)
Q Consensus 93 ~~~~~~~ 99 (201)
+.|+|+.
T Consensus 245 l~hp~~~ 251 (312)
T cd05585 245 KNHPFFS 251 (312)
T ss_pred HcCCCcC
Confidence 8999984
No 306
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=51.33 E-value=19 Score=27.54 Aligned_cols=76 Identities=12% Similarity=-0.054 Sum_probs=44.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
.++.|++++-+.-+..|..|+...+.......... .......+.. ++.+..+.+.+++..+| ..|..+.++ ..|
T Consensus 177 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~t~~~~-l~~ 251 (253)
T cd05122 177 KADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNP---EKRPTAEQL-LKH 251 (253)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCCh---hhCCCHHHH-hcC
Confidence 47889998888888889888765422111111111 1111111122 46777788888888876 446666776 666
Q ss_pred cc
Q psy10243 96 GF 97 (201)
Q Consensus 96 ~~ 97 (201)
+|
T Consensus 252 ~~ 253 (253)
T cd05122 252 PF 253 (253)
T ss_pred CC
Confidence 55
No 307
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=51.06 E-value=21 Score=27.55 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+.-+.+|.+|+......... ..........-...++.+....+.++|..+| +.|..+.++ ..++
T Consensus 179 ~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~~~~~~-l~~~ 252 (254)
T cd06627 179 ASDIWSLGCTVIELLTGNPPYYDLNPMAAL--FRIVQDDHPPLPEGISPELKDFLMQCFQKDP---NLRPTAKQL-LKHP 252 (254)
T ss_pred chhHHHHHHHHHHHHhCCCCCCCccHHHHH--HHHhccCCCCCCCCCCHHHHHHHHHHHhCCh---hhCcCHHHH-hcCC
Confidence 477888888888888999887643321111 0111111111123477888888888998866 456677777 6666
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 253 ~~ 254 (254)
T cd06627 253 WI 254 (254)
T ss_pred CC
Confidence 53
No 308
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=50.80 E-value=14 Score=30.51 Aligned_cols=80 Identities=9% Similarity=-0.057 Sum_probs=49.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccc--cc----cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH--
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDC--NR----RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM-- 87 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~----~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~-- 87 (201)
+.++.|++++-++-|..|..|+.......... .. +.+..-...-...++.+....+.++|..+| ..|..
T Consensus 175 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP---~~R~~~~ 251 (329)
T cd05618 175 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDP---KERLGCH 251 (329)
T ss_pred CccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCH---HHcCCCC
Confidence 35789999999999999999985322211110 00 011111111113488889999999999977 34433
Q ss_pred ----HHHHhccCcccc
Q psy10243 88 ----CGLVRLDLGFMI 99 (201)
Q Consensus 88 ----~~~~d~~~~~~~ 99 (201)
+.++ .+|+|+.
T Consensus 252 ~~~~~~~i-~~hp~f~ 266 (329)
T cd05618 252 PQTGFADI-QGHPFFR 266 (329)
T ss_pred CCCCHHHH-hcCCCCC
Confidence 4677 7899984
No 309
>cd04411 Ribosomal_P1_P2_L12p Ribosomal protein P1, P2, and L12p. Ribosomal proteins P1 and P2 are the eukaryotic proteins that are functionally equivalent to bacterial L7/L12. L12p is the archaeal homolog. Unlike other ribosomal proteins, the archaeal L12p and eukaryotic P1 and P2 do not share sequence similarity with their bacterial counterparts. They are part of the ribosomal stalk (called the L7/L12 stalk in bacteria), along with 28S rRNA and the proteins L11 and P0 in eukaryotes (23S rRNA, L11, and L10e in archaea). In bacterial ribosomes, L7/L12 homodimers bind the extended C-terminal helix of L10 to anchor the L7/L12 molecules to the ribosome. Eukaryotic P1/P2 heterodimers and archaeal L12p homodimers are believed to bind the L10 equivalent proteins, eukaryotic P0 and archaeal L10e, in a similar fashion. P1 and P2 (L12p, L7/L12) are the only proteins in the ribosome to occur as multimers, always appearing as sets of dimers. Recent data indicate that most archaeal species contain
Probab=50.53 E-value=77 Score=22.10 Aligned_cols=39 Identities=8% Similarity=0.355 Sum_probs=32.5
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
+|.+++.++|...|..+.++.+..+++.+.. .+.++.+.
T Consensus 17 ~ta~~I~~IL~aaGveVe~~~~~~~~~aLaG-----k~V~eli~ 55 (105)
T cd04411 17 LTEDKIKELLSAAGAEIEPERVKLFLSALNG-----KNIDEVIS 55 (105)
T ss_pred CCHHHHHHHHHHcCCCcCHHHHHHHHHHHcC-----CCHHHHHH
Confidence 9999999999999999999999999988742 45555554
No 310
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.43 E-value=39 Score=21.76 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=29.5
Q ss_pred CcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 150 DGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
+-.|+.+-++..+...|.++|+..++++++.+.
T Consensus 36 NPpine~~iR~M~~qmGqKpSe~kI~Qvm~~i~ 68 (71)
T COG3763 36 NPPINEEMIRMMMAQMGQKPSEKKINQVMRSII 68 (71)
T ss_pred CCCCCHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 457999999999999999999999999998764
No 311
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=50.09 E-value=23 Score=29.36 Aligned_cols=79 Identities=9% Similarity=0.003 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecc-------------------------------cCCcCCCC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLI-------------------------------ASEWYRCS 64 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~-------------------------------~~~~~~is 64 (201)
.-++-|++++-++-+..|..|+...... .....+.+.. ......++
T Consensus 195 ~~~DvwslGv~l~elltg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 271 (343)
T cd07851 195 QTVDIWSVGCIMAELLTGKTLFPGSDHI---DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGAN 271 (343)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCC
Confidence 3468899998888888999887532211 0000000000 00012368
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 65 PDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 65 ~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
.+..+++.++|..+| +.|..+.++ ..|+|+.+.
T Consensus 272 ~~l~dli~~~l~~~P---~~Rpt~~el-l~h~~~~~~ 304 (343)
T cd07851 272 PLAIDLLEKMLVLDP---DKRITAAEA-LAHPYLAEY 304 (343)
T ss_pred HHHHHHHHHhCCCCh---hhCCCHHHH-hcCCCcccc
Confidence 889999999999877 668888999 899999643
No 312
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=49.79 E-value=77 Score=21.27 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=25.2
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCC
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAMIAVADQ 183 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~ 183 (201)
.||.+||.+.-+..|.+++.++++.++..+..
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~ 45 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILRG 45 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhc
Confidence 57888888888888888888888887777653
No 313
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=49.78 E-value=22 Score=26.97 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=43.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecc---cCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLI---ASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~---~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++-|++++-+.-+.+|..|+......... ...+.... ...+..++.+....+.+++..+| +-|..+.++ .
T Consensus 166 ~~Di~slG~~l~~l~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rp~~~~~-~ 239 (244)
T smart00220 166 AVDVWSLGVILYELLTGKPPFPGDDQLLEL--FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDP---EKRLTAEEA-L 239 (244)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCcHHHH--HHHHhccCCCCccccccCCHHHHHHHHHHccCCc---hhccCHHHH-h
Confidence 467788887788888898887542111111 11111111 11111167788888888888876 445666666 5
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.++|+
T Consensus 240 ~~~~~ 244 (244)
T smart00220 240 QHPFF 244 (244)
T ss_pred hCCCC
Confidence 66653
No 314
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=49.73 E-value=30 Score=27.71 Aligned_cols=79 Identities=10% Similarity=-0.082 Sum_probs=47.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc---------------------------cceeecccCCcCC--CCHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---------------------------RVVQSLIASEWYR--CSPD 66 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------------~~~f~~~~~~~~~--is~~ 66 (201)
+.++.|++++-+.-|..|.+|+...+........ ............. ++..
T Consensus 186 ~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (293)
T cd07843 186 TAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDN 265 (293)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChH
Confidence 3478899999999999999888644321100000 0000000011111 4777
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+.++|..+| +.|..+.++ ..|+|+
T Consensus 266 ~~~li~~~l~~~p---~~R~t~~el-l~~~~f 293 (293)
T cd07843 266 GFDLLNRLLTYDP---AKRISAEDA-LKHPYF 293 (293)
T ss_pred HHHHHHHHhccCc---cccCCHHHH-hcCCCC
Confidence 8888888888877 567778888 777775
No 315
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=49.56 E-value=21 Score=27.66 Aligned_cols=77 Identities=10% Similarity=0.021 Sum_probs=46.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-++-+.-|..|+...+.......... ......-...++.+....+.+++..+| ..|..+.++ ..|+
T Consensus 182 ~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~~-l~~~ 256 (258)
T cd06632 182 AADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDP---SLRPTAAEL-LEHP 256 (258)
T ss_pred hhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCc---ccCcCHHHH-hcCC
Confidence 37889999888888889888765432111111010 001111123477888888888888766 446677777 6776
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 257 ~~ 258 (258)
T cd06632 257 FV 258 (258)
T ss_pred CC
Confidence 53
No 316
>PRK00523 hypothetical protein; Provisional
Probab=49.27 E-value=38 Score=21.94 Aligned_cols=33 Identities=15% Similarity=0.312 Sum_probs=29.3
Q ss_pred CcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 150 DGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
+=.|+.+-++..+...|.++|+..++++++.+.
T Consensus 37 NPpine~mir~M~~QMGqKPSekki~Q~m~~mk 69 (72)
T PRK00523 37 NPPITENMIRAMYMQMGRKPSESQIKQVMRSVK 69 (72)
T ss_pred CcCCCHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 447899999999999999999999999998873
No 317
>KOG0610|consensus
Probab=49.21 E-value=38 Score=29.78 Aligned_cols=84 Identities=12% Similarity=0.006 Sum_probs=56.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc-CCcCCCCHHHHHHHHHHhCCCCChhH--HHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA-SEWYRCSPDTRRCLLMTLRQAQMPGH--LRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~is~~~~~~il~~L~~~~s~~~--~~~~~~~~d~ 93 (201)
+-+-||++|=++=|+.|-.||.....+.+- ..++-.-.. .+...+|..+++.|.+.|.++|+. . ...=+.++ .
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl--~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k-Rlg~~rGA~eI-K 390 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETL--RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK-RLGSKRGAAEI-K 390 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhhH--HHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh-hhccccchHHh-h
Confidence 456799999999999999999987776553 222221111 112359999999999999998843 2 12225666 6
Q ss_pred cCccccccccccccHH
Q psy10243 94 DLGFMINVLRFSLTFV 109 (201)
Q Consensus 94 ~~~~~~~~~~g~i~f~ 109 (201)
.|+.+ ..|+|.
T Consensus 391 ~HpFF-----~gVnWa 401 (459)
T KOG0610|consen 391 RHPFF-----EGVNWA 401 (459)
T ss_pred cCccc-----cCCChh
Confidence 77766 345554
No 318
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=49.20 E-value=42 Score=28.48 Aligned_cols=44 Identities=16% Similarity=0.305 Sum_probs=33.7
Q ss_pred CCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 149 GDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+|.||++|-...++......+++.++.+++.++ ||-+||..++
T Consensus 299 R~G~itReeal~~v~~~d~~~~~~~~~~~~~~lg------~t~~ef~~~~ 342 (343)
T TIGR03573 299 RSGRITREEAIELVKEYDGEFPKEDLEYFLKYLG------ISEEEFWKTV 342 (343)
T ss_pred HcCCCCHHHHHHHHHHhcccccHHHHHHHHHHhC------CCHHHHHHHh
Confidence 4788888888888887655566788888888886 7778887664
No 319
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=48.95 E-value=7.1 Score=32.18 Aligned_cols=79 Identities=13% Similarity=-0.077 Sum_probs=49.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc-CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA-SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
..++.|++++-+.-|..|..|+...+...........-.... .....++.+....+.++|. +| ..|..++++ ..
T Consensus 188 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p---~~R~t~~~l-~~ 262 (330)
T cd05601 188 VECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQ---KERLGYEGL-CC 262 (330)
T ss_pred CcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-Ch---hhCCCHHHH-hC
Confidence 346889999999999999999864332211110000000111 1123478888888877774 55 567888888 89
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
|+|+.
T Consensus 263 h~~~~ 267 (330)
T cd05601 263 HPFFS 267 (330)
T ss_pred CCCcC
Confidence 99994
No 320
>cd00086 homeodomain Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Probab=48.93 E-value=54 Score=19.26 Aligned_cols=41 Identities=29% Similarity=0.316 Sum_probs=32.6
Q ss_pred ccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHh
Q psy10243 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV 180 (201)
Q Consensus 133 ~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~ 180 (201)
.....|..+|.. +.+.+..++..+...+| ++...|...|..
T Consensus 10 ~~~~~Le~~f~~-----~~~P~~~~~~~la~~~~--l~~~qV~~WF~n 50 (59)
T cd00086 10 EQLEELEKEFEK-----NPYPSREEREELAKELG--LTERQVKIWFQN 50 (59)
T ss_pred HHHHHHHHHHHh-----CCCCCHHHHHHHHHHHC--cCHHHHHHHHHH
Confidence 446677788886 56899999999988888 788888888765
No 321
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=48.62 E-value=20 Score=28.01 Aligned_cols=77 Identities=12% Similarity=-0.052 Sum_probs=47.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceee-cccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-LIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++.|++++-+.-+.+|.+|+......... .+.... ....-...++.+....+.+++..+| ..|..+.++ ..
T Consensus 186 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~l-l~ 259 (263)
T cd06625 186 RKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--FKIATQPTNPQLPSHVSPDARNFLRRTFVENA---KKRPSAEEL-LR 259 (263)
T ss_pred chhhhHHHHHHHHHHHhCCCCccccchHHHH--HHHhccCCCCCCCccCCHHHHHHHHHHhhcCc---ccCCCHHHH-hh
Confidence 4578999999999999999988643221110 011000 0011112377888888888888876 456677777 67
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
++|+
T Consensus 260 ~~~~ 263 (263)
T cd06625 260 HFFV 263 (263)
T ss_pred CCCC
Confidence 7664
No 322
>KOG2301|consensus
Probab=48.41 E-value=20 Score=36.75 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCC----HHHHHHHHHhhCCCC
Q psy10243 110 NFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT----EEEVDAMIAVADQEG 185 (201)
Q Consensus 110 eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s----~~ei~~i~~~~d~~~ 185 (201)
-|+++.++.|--.+......-...+.++..++...+|++..|+|...++...++.+..++. ... +-+--.+....
T Consensus 1391 LfVAVImeNFs~~t~~~s~~Ls~~d~~~F~~vW~~fDpeatg~I~~~~~~~~lr~L~ppL~~~k~~~~-kli~mdmp~~~ 1469 (1592)
T KOG2301|consen 1391 LFVAVILENFSYATEDSSEGLSEDDFEKFYEAWDEFDPEATQEIPYSDLSAFLRSLDPPLDLGKPNKR-KLISMDLPMVS 1469 (1592)
T ss_pred HHHHHHHhhhhhhcccccccCCcccHHHHHHHHHhcChhhheeeeHhhHHHHHHhcCCccccCCCCCc-eeeeeecCcCC
Confidence 3334444444433333332344566888999999999999999999999999998754431 111 11222234456
Q ss_pred CCcccHHHHHHHHh
Q psy10243 186 LGYIRYEDFVQVML 199 (201)
Q Consensus 186 ~g~I~~~eF~~~l~ 199 (201)
+|+|+|.+-+.++.
T Consensus 1470 gd~V~f~d~L~aL~ 1483 (1592)
T KOG2301|consen 1470 GDRVHCLDILFALT 1483 (1592)
T ss_pred CCeeehhhHHHHHH
Confidence 77888877665543
No 323
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=48.02 E-value=16 Score=29.25 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=47.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccC-CcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIAS-EWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+.-+..|.+|+............. ....... ....++.+....+.+++..+| ..|..+.++ ..+
T Consensus 196 ~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~~i-l~~ 270 (286)
T cd06614 196 KVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT-TKGIPPLKNPEKWSPEFKDFLNKCLVKDP---EKRPSAEEL-LQH 270 (286)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCCCCCcchhhCCHHHHHHHHHHhccCh---hhCcCHHHH-hhC
Confidence 4688999999999989998876432211000000 0001111 112267778888888888876 557777888 777
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 271 ~~~~~ 275 (286)
T cd06614 271 PFLKK 275 (286)
T ss_pred hHhhc
Confidence 77743
No 324
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=47.93 E-value=38 Score=27.14 Aligned_cols=79 Identities=10% Similarity=-0.019 Sum_probs=48.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChh--HHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPG--HLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~--~~~~~~~~~d~ 93 (201)
+.++.|++++-+.-|.+|.+|+........ ..+.. .-.-.-...++......+.+++..+|... .+...++++ .
T Consensus 177 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l-~ 252 (290)
T cd05580 177 KAVDWWALGILIYEMLAGYPPFFDDNPIQI--YEKIL-EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDI-K 252 (290)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHh-cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHH-H
Confidence 347899999999999999999865432110 01111 00000012367888888888888876321 112277788 7
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 253 ~~~~~ 257 (290)
T cd05580 253 NHPWF 257 (290)
T ss_pred cCccc
Confidence 89988
No 325
>KOG0039|consensus
Probab=47.49 E-value=38 Score=31.46 Aligned_cols=66 Identities=29% Similarity=0.486 Sum_probs=49.7
Q ss_pred cccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHh---C-----CCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 132 VESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---G-----EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 132 ~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l---g-----~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
.+...+++..|..+|. ++|.++.+++..++..+ + .....+....++.+.+.++.|.+.++++...+
T Consensus 14 ~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ll 87 (646)
T KOG0039|consen 14 CSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDHKGYITNEDLEILL 87 (646)
T ss_pred CChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccccceeeecchhHHH
Confidence 3567889999999998 89999999999887653 1 23345566778888888888877766665444
No 326
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=47.36 E-value=23 Score=28.09 Aligned_cols=78 Identities=10% Similarity=-0.057 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc-----------cccceeec-----------------ccCCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC-----------NRRVVQSL-----------------IASEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~f~~-----------------~~~~~~~is~~~~ 68 (201)
.++-|++++-+.-|.+|.+++...+...... ..+..+.. .......++....
T Consensus 181 ~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (286)
T cd07846 181 AVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVL 260 (286)
T ss_pred hHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHH
Confidence 4789999999999999988875433210000 00000000 0001234677888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
..+.+++..+| +.|..++++ ..|+|+
T Consensus 261 ~li~~~l~~~P---~~Rp~~~~i-l~~~~~ 286 (286)
T cd07846 261 DLAKQCLRIDP---DDRPSSSQL-LHHEFF 286 (286)
T ss_pred HHHHHHhcCCc---ccchhHHHH-hcCCCC
Confidence 88888888877 567777887 777764
No 327
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=47.36 E-value=7 Score=33.05 Aligned_cols=82 Identities=7% Similarity=-0.101 Sum_probs=49.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
..++.|++++-++-|..|.+|+............ ...-.+.-.++..+|.+..+++.++|. .+.+.--+..+.++ ..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~-l~ 304 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI-KS 304 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH-hc
Confidence 3478899999999999999998654321110000 000011112233588899998888885 33221114477788 89
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
|+|+.
T Consensus 305 hp~~~ 309 (377)
T cd05629 305 HPFFR 309 (377)
T ss_pred CCCcC
Confidence 99984
No 328
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=46.16 E-value=24 Score=29.13 Aligned_cols=81 Identities=7% Similarity=-0.077 Sum_probs=50.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccc------------cccccc--------ceeecc----c----CCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKL------------DDCNRR--------VVQSLI----A----SEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~--------~~f~~~----~----~~~~~is~~~~ 68 (201)
.++.|++++.+.-|..|.+++....... ...... ...... . .....++.+..
T Consensus 190 ~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (336)
T cd07849 190 AIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKAL 269 (336)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHH
Confidence 4688999999999999998875321100 000000 000000 0 00123677888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
+.+.++|..+| +.|..+.++ ..|+|+...
T Consensus 270 ~li~~~l~~dP---~~Rpt~~e~-l~hp~~~~~ 298 (336)
T cd07849 270 DLLDKMLTFNP---HKRITVEEA-LAHPYLEQY 298 (336)
T ss_pred HHHHHHcCCCh---hhCcCHHHH-hcCcccccc
Confidence 89999999877 678889999 899998644
No 329
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=46.10 E-value=36 Score=26.70 Aligned_cols=76 Identities=11% Similarity=-0.058 Sum_probs=44.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC---cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE---WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~---~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++.|++++-++-|.-|.+|+.......... ......+.... ...++......+.+++..+| +.|..++++ .
T Consensus 189 ~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~l-l 263 (267)
T cd06645 189 LCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNP---KKRPTAEKL-L 263 (267)
T ss_pred hhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhccCCCCCcccccCCCCHHHHHHHHHHccCCc---hhCcCHHHH-h
Confidence 5788999998888888888775322111100 00000111111 11366777788888888877 556777777 6
Q ss_pred cCcc
Q psy10243 94 DLGF 97 (201)
Q Consensus 94 ~~~~ 97 (201)
.|+|
T Consensus 264 ~~~~ 267 (267)
T cd06645 264 QHPF 267 (267)
T ss_pred cCCC
Confidence 6664
No 330
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=45.95 E-value=14 Score=30.60 Aligned_cols=81 Identities=9% Similarity=-0.113 Sum_probs=48.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc---ceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR---VVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d 92 (201)
+.++.|++++-++-|.+|.+|+...+......... .-+. .......++.+..+.+.++|...+ ..-.+..+.++
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~~s~~~~~li~~ll~~~~-~r~~r~~~~~~- 263 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ-FPAQVTDVSEDAKDLIRRLICSRE-HRLGQNGIEDF- 263 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc-CCCccccCCHHHHHHHHHHccChh-hhcCCCCHHHH-
Confidence 45788999999999999999987543221110000 0011 111123478888888888775432 11123467778
Q ss_pred ccCcccc
Q psy10243 93 LDLGFMI 99 (201)
Q Consensus 93 ~~~~~~~ 99 (201)
..|+|+.
T Consensus 264 ~~h~~f~ 270 (332)
T cd05623 264 KQHPFFT 270 (332)
T ss_pred hCCCCcC
Confidence 8999983
No 331
>COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]
Probab=45.93 E-value=31 Score=26.75 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=33.8
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHH
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAM 177 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i 177 (201)
.+..+++|..||..+--..+.+++.+++...|.--....++..
T Consensus 54 Re~freaF~~Fd~~kVA~~~~~dverLl~d~gIIR~r~KI~A~ 96 (188)
T COG2818 54 REAFREAFHGFDPEKVAAMTEEDVERLLADAGIIRNRGKIKAT 96 (188)
T ss_pred HHHHHHHHhcCCHHHHHcCCHHHHHHHHhCcchhhhHHHHHHH
Confidence 7788999999999999999999999999887754333334333
No 332
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=45.59 E-value=48 Score=25.48 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=31.2
Q ss_pred CcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 146 DKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 146 D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
-.|.+|++..++|.+.++.-+..++.+++.+++..-|
T Consensus 27 ~ld~~G~v~v~~Ll~~~~~~~~~~t~~~l~~vV~~d~ 63 (179)
T PRK00819 27 TLDEEGWVDIDALIEALAKAYKWVTRELLEAVVESDD 63 (179)
T ss_pred ccCCCCCEEHHHHHHHHHHccCCCCHHHHHHHHHcCC
Confidence 3578999999999999887667789999999887655
No 333
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=45.19 E-value=24 Score=27.81 Aligned_cols=75 Identities=8% Similarity=-0.100 Sum_probs=44.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
.++.|++++-+.-+..|.+|+......... ...........-.. ++.. ...+++++..+| +-|..++++ ..|
T Consensus 189 ~~Dv~slG~i~~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~li~~~~~~p---~~Rp~~~ei-l~h 261 (266)
T cd06651 189 KADVWSLGCTVVEMLTEKPPWAEYEAMAAI--FKIATQPTNPQLPSHISEH-ARDFLGCIFVEA---RHRPSAEEL-LRH 261 (266)
T ss_pred hhhhHHHHHHHHHHHHCCCCccccchHHHH--HHHhcCCCCCCCchhcCHH-HHHHHHHhcCCh---hhCcCHHHH-hcC
Confidence 478899998888899999998643221111 01100011111112 4444 444457777766 667888998 888
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
||+
T Consensus 262 p~~ 264 (266)
T cd06651 262 PFA 264 (266)
T ss_pred ccc
Confidence 876
No 334
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=45.16 E-value=19 Score=28.60 Aligned_cols=79 Identities=14% Similarity=0.012 Sum_probs=47.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc-c-----------ce--------eeccc-------CCcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-R-----------VV--------QSLIA-------SEWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-----------~~--------f~~~~-------~~~~~is~~~~ 68 (201)
+.++.|++++-+.-|..|.+++............ . .+ ..+.. .-...++.+..
T Consensus 180 ~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (286)
T cd07832 180 PGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEAL 259 (286)
T ss_pred chhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHH
Confidence 4588899999999999998776543321000000 0 00 00000 00123567778
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+.+.++|..+| +.|..++++ ..|+|+
T Consensus 260 ~li~~~l~~~p---~~R~~~~~~-l~h~~~ 285 (286)
T cd07832 260 DLLKGLLVYDP---SKRLSAAEA-LRHPYF 285 (286)
T ss_pred HHHHHHhccCh---hhCCCHHHH-hhCcCc
Confidence 88888888877 667788888 888876
No 335
>PHA03207 serine/threonine kinase US3; Provisional
Probab=44.87 E-value=19 Score=30.70 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=49.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccc-----------------------e--eec-ccCC--------cC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-----------------------V--QSL-IASE--------WY 61 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----------------------~--f~~-~~~~--------~~ 61 (201)
+.++.|++++-++-|..|..|+............+. + +.. ...+ ..
T Consensus 266 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (392)
T PHA03207 266 AKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKY 345 (392)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhcc
Confidence 457899999999999999888754322110000000 0 000 0000 01
Q ss_pred CCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 62 RCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 62 ~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
..+.+...++.++|..+| +.|..+.++ +.|+|+.+
T Consensus 346 ~~~~~~~~li~~ml~~dp---~~Rpsa~e~-l~~p~f~~ 380 (392)
T PHA03207 346 GMHMDVEYLIAKMLTFDQ---EFRPSAQDI-LSLPLFTK 380 (392)
T ss_pred CcchhHHHHHHHHhccCh---hhCCCHHHH-hhCchhhc
Confidence 245666777888888877 678899999 89999854
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=44.67 E-value=30 Score=27.63 Aligned_cols=80 Identities=11% Similarity=0.057 Sum_probs=47.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccc-ccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH---HHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCN-RRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM---CGLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~---~~~~ 91 (201)
+-++-|++++-+.-|..|..|+........... .+.+..........++.+..+.+.+++..+| +.|.. +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDP---KKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCH---hhccCcchHHHH
Confidence 356788888888888899999864432211111 1112222222223378888888888898876 44443 3344
Q ss_pred hccCcccc
Q psy10243 92 RLDLGFMI 99 (201)
Q Consensus 92 d~~~~~~~ 99 (201)
++|+|+.
T Consensus 264 -l~~~~~~ 270 (288)
T cd05583 264 -KNHPFFQ 270 (288)
T ss_pred -hcCcccc
Confidence 7888873
No 337
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=44.28 E-value=24 Score=28.96 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=48.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHH-HHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMC-GLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~-~~~d~~ 94 (201)
+-++.|++++-+.-|.+|..|+........ ...+......-...++.+....+.++|..+| ..|..+ .++ .+
T Consensus 175 ~~~DvwslG~il~ell~G~~Pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P---~~R~~~~~~l-~~ 247 (316)
T cd05592 175 ESVDWWSFGVLLYEMLIGQSPFHGEDEDEL---FDSILNDRPHFPRWISKEAKDCLSKLFERDP---TKRLGVDGDI-RQ 247 (316)
T ss_pred CcccchhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCHHHHHHHHHHccCCH---HHcCCChHHH-Hc
Confidence 447899999999999999999875432111 1111111111112378888888888998877 445433 355 67
Q ss_pred Ccccc
Q psy10243 95 LGFMI 99 (201)
Q Consensus 95 ~~~~~ 99 (201)
|+|+.
T Consensus 248 h~~~~ 252 (316)
T cd05592 248 HPFFR 252 (316)
T ss_pred CcccC
Confidence 88883
No 338
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=44.26 E-value=19 Score=29.50 Aligned_cols=80 Identities=15% Similarity=0.007 Sum_probs=50.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccc------------c--------cccceee-c-------ccCCcCCCCHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDD------------C--------NRRVVQS-L-------IASEWYRCSPDT 67 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~--------~~~~~f~-~-------~~~~~~~is~~~ 67 (201)
+.++.|++++-+.-|..|.+|+......... . ..+..+. . .......++.+.
T Consensus 187 ~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (338)
T cd07859 187 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLA 266 (338)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHH
Confidence 4578999999999999998887543211000 0 0000000 0 001122467778
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 68 RRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 68 ~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+.++|..+| +.|..+.++ ..|+|+.
T Consensus 267 ~~li~~~l~~~P---~~Rpt~~e~-l~hp~f~ 294 (338)
T cd07859 267 LRLLERLLAFDP---KDRPTAEEA-LADPYFK 294 (338)
T ss_pred HHHHHHHcCcCc---ccCCCHHHH-hcCchhh
Confidence 888999998877 557888888 8999884
No 339
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=43.99 E-value=43 Score=26.52 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 62 RCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 62 ~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.++.+..+.+.++|..+| ..|..++++ ..|+|+
T Consensus 252 ~~~~~~~~li~~~l~~~P---~~R~t~~~i-l~h~~f 284 (284)
T cd07839 252 KLNSTGRDLLQNLLVCNP---VQRISAEEA-LQHPYF 284 (284)
T ss_pred cCCHHHHHHHHHHhcCCh---hhcCCHHHH-hcCCCC
Confidence 378888999999999987 567888888 888875
No 340
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=43.79 E-value=24 Score=27.36 Aligned_cols=75 Identities=12% Similarity=0.028 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC---CCHHHHHHHHHHhCCCCChhHHHHHH---HH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR---CSPDTRRCLLMTLRQAQMPGHLRFMC---GL 90 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~---is~~~~~~il~~L~~~~s~~~~~~~~---~~ 90 (201)
.++.|++++-+.-+..|..|+......... ..... ....+.. ++.+....+.+++..+| ..|..+ .+
T Consensus 181 ~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rpt~~~~~~ 253 (265)
T cd05579 181 TVDWWSLGCILYEFLVGIPPFHGETPEEIF--QNILN--GKIEWPEDVEVSDEAIDLISKLLVPDP---EKRLGAKSIEE 253 (265)
T ss_pred chhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHhc--CCcCCCccccCCHHHHHHHHHHhcCCH---hhcCCCccHHH
Confidence 467888888888888898887543321100 00000 1111222 48888888888998866 455555 67
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ++++|+.
T Consensus 254 ~-l~~~~~~ 261 (265)
T cd05579 254 I-KNHPFFK 261 (265)
T ss_pred H-hcCcccc
Confidence 7 7888883
No 341
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=43.62 E-value=49 Score=25.92 Aligned_cols=75 Identities=8% Similarity=-0.146 Sum_probs=43.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc-cceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR-RVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
.++.|++++-++.|..|.+|+............ ...+...... ...++.+..+++.++|..+| +.|..++++ ..
T Consensus 189 ~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~Rp~~~~i-l~ 264 (267)
T cd06646 189 LCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNP---KKRPTAERL-LT 264 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCCh---hhCcCHHHH-hc
Confidence 468899998888888898887532211100000 0001111111 12367888888888888876 556666666 44
Q ss_pred C
Q psy10243 95 L 95 (201)
Q Consensus 95 ~ 95 (201)
+
T Consensus 265 ~ 265 (267)
T cd06646 265 H 265 (267)
T ss_pred C
Confidence 4
No 342
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=43.57 E-value=30 Score=28.00 Aligned_cols=78 Identities=14% Similarity=0.053 Sum_probs=46.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceee-c-ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH---HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQS-L-IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM---CGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~-~-~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~---~~~ 90 (201)
+.++.|++++-+..+..|..|+...... ....+.... . .......++.+....+.+++..+| +.|.. +.+
T Consensus 195 ~~~Di~slG~vl~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P---~~R~~~~~~~~ 269 (305)
T cd05609 195 KPVDWWAMGIILYEFLVGCVPFFGDTPE--ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNP---LERLGTGGAFE 269 (305)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccCh---hhccCccCHHH
Confidence 3478889998888899999888632211 100111000 0 011112478888899999999877 44543 444
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ .+|+|+.
T Consensus 270 l-l~~~~~~ 277 (305)
T cd05609 270 V-KQHRFFL 277 (305)
T ss_pred H-HhCcccc
Confidence 4 6888874
No 343
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=43.40 E-value=25 Score=28.92 Aligned_cols=82 Identities=12% Similarity=-0.025 Sum_probs=51.3
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccc---------c---------ceeeccc-------CCcCCCCHHHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---------R---------VVQSLIA-------SEWYRCSPDTRRC 70 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------~---------~~f~~~~-------~~~~~is~~~~~~ 70 (201)
+.++.|++++-+.-|.+|.+|+............ . ....+.. ......+.+..+.
T Consensus 213 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 292 (335)
T PTZ00024 213 FAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDL 292 (335)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHH
Confidence 3468899999888888999888654321100000 0 0000000 0012257788899
Q ss_pred HHHHhCCCCChhHHHHHHHHHhccCcccccc
Q psy10243 71 LLMTLRQAQMPGHLRFMCGLVRLDLGFMINV 101 (201)
Q Consensus 71 il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~ 101 (201)
+.++|..+| +.|..++++ +.|+|+...
T Consensus 293 i~~~l~~~P---~~R~s~~~~-l~~~~~~~~ 319 (335)
T PTZ00024 293 LQSLLKLNP---LERISAKEA-LKHEYFKSD 319 (335)
T ss_pred HHHHcCCCc---hhccCHHHH-hcCcccCCC
Confidence 999999877 668888999 899999643
No 344
>PRK01844 hypothetical protein; Provisional
Probab=43.38 E-value=53 Score=21.27 Aligned_cols=33 Identities=21% Similarity=0.459 Sum_probs=29.2
Q ss_pred CcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 150 DGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 150 ~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
+=.|+.+-++..+...|.++|+..++++++.+.
T Consensus 36 NPpine~mir~Mm~QMGqkPSekki~Q~m~~mk 68 (72)
T PRK01844 36 NPPINEQMLKMMMMQMGQKPSQKKINQMMSAMN 68 (72)
T ss_pred CCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 347899999999999999999999999998873
No 345
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=43.31 E-value=38 Score=28.21 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+..+.+.++|..+| ..|..+.++ +.|+|+.
T Consensus 283 ~~~~~~~li~~~L~~dP---~~R~t~~ei-L~~~~~~ 315 (353)
T cd07850 283 KASQARDLLSKMLVIDP---EKRISVDDA-LQHPYIN 315 (353)
T ss_pred chhHHHHHHHHHcCCCh---hhCcCHHHH-hcChhHh
Confidence 45667888889999887 678899999 8998774
No 346
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=43.02 E-value=26 Score=22.56 Aligned_cols=40 Identities=10% Similarity=0.160 Sum_probs=23.0
Q ss_pred HHHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCCHHHHHHHHHh
Q psy10243 137 ELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIAV 180 (201)
Q Consensus 137 ~l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s~~ei~~i~~~ 180 (201)
.+..+...|+.=+.+.|+++||.+-++.+ | ++-+..++..
T Consensus 26 ~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG----D~lL~s~I~~ 66 (70)
T PF12174_consen 26 KMDLLQKHYEEFKKKKISREEFVRKLRQIVG----DQLLRSAIKS 66 (70)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 34444444444566778888887777764 4 4444444443
No 347
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=43.01 E-value=30 Score=26.75 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=44.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcC-CCCHHHHHHHHHHhCCCCChhHHHHHH---HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWY-RCSPDTRRCLLMTLRQAQMPGHLRFMC---GLV 91 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~is~~~~~~il~~L~~~~s~~~~~~~~---~~~ 91 (201)
+.++.|.+++-+.-+..|..|+...... . ..+.+.. ...+.. .++.+....+.+++..+| +.|..+ .++
T Consensus 172 ~~~D~~slG~~~~~l~~g~~p~~~~~~~--~-~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~p---~~R~~~~~~~~l 244 (250)
T cd05123 172 KAVDWWSLGVLLYEMLTGKPPFYAEDRK--E-IYEKILK-DPLRFPEFLSPEARDLISGLLQKDP---TKRLGSGGAEEI 244 (250)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCHH--H-HHHHHhc-CCCCCCCCCCHHHHHHHHHHhcCCH---hhCCCcccHHHH
Confidence 3477888888888888899887543321 1 1111111 112222 267778888888887765 445555 566
Q ss_pred hccCccc
Q psy10243 92 RLDLGFM 98 (201)
Q Consensus 92 d~~~~~~ 98 (201)
.+|+|+
T Consensus 245 -~~~~~f 250 (250)
T cd05123 245 -KAHPFF 250 (250)
T ss_pred -HhCCCC
Confidence 667664
No 348
>KOG0690|consensus
Probab=42.77 E-value=25 Score=30.15 Aligned_cols=58 Identities=12% Similarity=0.073 Sum_probs=39.2
Q ss_pred hhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCCCC
Q psy10243 19 QRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQM 80 (201)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s 80 (201)
+-|++++-+.-|.||-+||.-..-. ....+.-..+-...+ +|++++..+...|.++|.
T Consensus 350 DWWG~GVVMYEMmCGRLPFyn~dh~----kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~ 408 (516)
T KOG0690|consen 350 DWWGVGVVMYEMMCGRLPFYNKDHE----KLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPK 408 (516)
T ss_pred ehhhhhHHHHHHHhccCcccccchh----HHHHHHHhhhccCCccCCHHHHHHHHHHhhcChH
Confidence 5689999999999999999842211 111222223333344 999999999888888763
No 349
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.75 E-value=37 Score=25.15 Aligned_cols=60 Identities=27% Similarity=0.397 Sum_probs=43.7
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHh--CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHhc
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNL--GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~l--g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~~ 200 (201)
-..|+..+. ||.++..|......-+ ...++.+++..++.....-+...+++..|...+.+
T Consensus 33 ~Llf~Vm~A--DG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r 94 (148)
T COG4103 33 ALLFHVMEA--DGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKR 94 (148)
T ss_pred HHHHHHHhc--ccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 367888765 5677877755443322 35688999999998887777788999888887764
No 350
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=42.71 E-value=34 Score=28.39 Aligned_cols=79 Identities=14% Similarity=-0.003 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccc-----------c-cccceeecc----c-CC----------cCCCCHHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDD-----------C-NRRVVQSLI----A-SE----------WYRCSPDTRR 69 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~-~~~~~f~~~----~-~~----------~~~is~~~~~ 69 (201)
.++-|++++-+.-|.+|..|+......... . ....+.+.. . .. -..++.+...
T Consensus 199 ~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (342)
T cd07854 199 AIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALD 278 (342)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHH
Confidence 468899999999999999888532210000 0 000000000 0 00 0137788889
Q ss_pred HHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 70 CLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 70 ~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
++.++|..+| +.|..+.++ ..|+|+.
T Consensus 279 li~~~L~~dP---~~R~t~~el-l~h~~~~ 304 (342)
T cd07854 279 FLEQILTFNP---MDRLTAEEA-LMHPYMS 304 (342)
T ss_pred HHHHHhCCCc---hhccCHHHH-hCCCccc
Confidence 9999999877 667888999 8999995
No 351
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=42.60 E-value=24 Score=34.60 Aligned_cols=78 Identities=6% Similarity=-0.166 Sum_probs=50.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++.++-|.+|.+||........ ....+......+....+.+...++.++|..+| +.|..+.++ +.+
T Consensus 222 ~KSDVWSLG~ILYELLTGk~PF~~~~~~~q--li~~lk~~p~lpi~~~S~eL~dLI~~~L~~dP---eeRPSa~Ql-L~h 295 (1021)
T PTZ00266 222 DKSDMWALGCIIYELCSGKTPFHKANNFSQ--LISELKRGPDLPIKGKSKELNILIKNLLNLSA---KERPSALQC-LGY 295 (1021)
T ss_pred chhHHHHHHHHHHHHHHCCCCCCcCCcHHH--HHHHHhcCCCCCcCCCCHHHHHHHHHHhcCCh---hHCcCHHHH-hcc
Confidence 457999999999999999999864322110 11111111112223467888888888998876 567777777 677
Q ss_pred cccc
Q psy10243 96 GFMI 99 (201)
Q Consensus 96 ~~~~ 99 (201)
+|+.
T Consensus 296 ~~ik 299 (1021)
T PTZ00266 296 QIIK 299 (1021)
T ss_pred HHHh
Confidence 7774
No 352
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=42.40 E-value=22 Score=27.71 Aligned_cols=76 Identities=11% Similarity=-0.105 Sum_probs=43.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeeccc---CCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIA---SEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~---~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
.++.|++++-+.-|..|.+|+...+......... ...+.. .....++.+....+.+++..+| ..|..++++ .
T Consensus 184 ~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~i-l 258 (262)
T cd06613 184 KCDIWALGITAIELAELQPPMFDLHPMRALFLIS-KSNFPPPKLKDKEKWSPVFHDFIKKCLTKDP---KKRPTATKL-L 258 (262)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hccCCCccccchhhhhHHHHHHHHHHcCCCh---hhCCCHHHH-h
Confidence 3688899888888888998876433211110000 000000 0112356677777777888876 556777777 6
Q ss_pred cCcc
Q psy10243 94 DLGF 97 (201)
Q Consensus 94 ~~~~ 97 (201)
.|+|
T Consensus 259 ~~~~ 262 (262)
T cd06613 259 QHPF 262 (262)
T ss_pred cCCC
Confidence 6654
No 353
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=42.10 E-value=32 Score=28.34 Aligned_cols=78 Identities=9% Similarity=-0.139 Sum_probs=48.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHH---HHHHHHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHL---RFMCGLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~---~~~~~~~d 92 (201)
+.++.|++++-+.-|..|.+|+........ .+.+....-.-...++.+..+.+.++|..+|.. .. .....++
T Consensus 180 ~~~DiwslGvil~elltG~~pf~~~~~~~~---~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~-R~~~~~~~~~~i- 254 (323)
T cd05615 180 KSVDWWAYGVLLYEMLAGQPPFDGEDEDEL---FQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSK-RLGCGPEGERDI- 254 (323)
T ss_pred CccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCCCCccCCHHHHHHHHHHcccCHhh-CCCCCCCCHHHH-
Confidence 457899999999999999999875432211 111111111111348889999999999887632 11 1234566
Q ss_pred ccCccc
Q psy10243 93 LDLGFM 98 (201)
Q Consensus 93 ~~~~~~ 98 (201)
..|+|+
T Consensus 255 ~~h~~f 260 (323)
T cd05615 255 REHAFF 260 (323)
T ss_pred hcCccc
Confidence 788888
No 354
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=41.81 E-value=39 Score=21.66 Aligned_cols=47 Identities=23% Similarity=0.311 Sum_probs=31.0
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHh----CCCCCHHHHHHHHHhh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNL----GEKLTEEEVDAMIAVA 181 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l----g~~~s~~ei~~i~~~~ 181 (201)
...+..+...++.+..--+-..+|+.++..+ |...+++-++.+|+.|
T Consensus 22 ~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L~~ItG~~~~ediLd~IFs~F 72 (73)
T PF12631_consen 22 LEHLEDALEALENGLPLDLVAEDLREALESLGEITGEVVTEDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHCTSS--HHHHHHHHCTS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhh
Confidence 4556666666666655567778888888775 5667788888888765
No 355
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=41.77 E-value=60 Score=18.71 Aligned_cols=30 Identities=17% Similarity=0.436 Sum_probs=21.8
Q ss_pred HHHHHHHhhhhC-c-CCCcceeHHHHHHHHHH
Q psy10243 135 GEELLEAFRVFD-K-DGDGIINVAELRHVMTN 164 (201)
Q Consensus 135 ~~~l~~~F~~~D-~-~~~G~Is~~el~~~l~~ 164 (201)
...+..+|..+- + .....++..||+.++..
T Consensus 5 i~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 5 IETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 456677888773 2 34568999999999865
No 356
>PLN02952 phosphoinositide phospholipase C
Probab=41.28 E-value=79 Score=29.17 Aligned_cols=50 Identities=10% Similarity=0.137 Sum_probs=38.1
Q ss_pred CCcceeHHHHHHHHHHhC--CCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 149 GDGIINVAELRHVMTNLG--EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg--~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
+.|.++.+++....+.+. ...+..++..+|..+..+ ++.++.++|..+|.
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~ 64 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG-GGHMGADQLRRFLV 64 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC-CCccCHHHHHHHHH
Confidence 468999999987766653 223678999999999743 46799999988875
No 357
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=41.10 E-value=34 Score=28.36 Aligned_cols=80 Identities=10% Similarity=0.003 Sum_probs=50.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc--------------------ccc-eee---ccc----CCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN--------------------RRV-VQS---LIA----SEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------------------~~~-~f~---~~~----~~~~~is~~~~ 68 (201)
-++.|++++-+.-|..|..|+........... .+. +.. .-. ..+..++.+..
T Consensus 195 ~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (342)
T cd07879 195 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAV 274 (342)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHH
Confidence 47889999999889899988864321000000 000 000 000 00124677888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
+.+.++|..+| +.|..++++ ..|+|+..
T Consensus 275 ~li~~~l~~dP---~~R~~~~e~-l~h~~f~~ 302 (342)
T cd07879 275 DLLEKMLELDV---DKRLTATEA-LEHPYFDS 302 (342)
T ss_pred HHHHHHcCCCh---hhCcCHHHH-hcCcchhh
Confidence 99999999887 667888888 89998843
No 358
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=40.75 E-value=40 Score=27.73 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=50.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccc------------c--------ccccc----eeecccCCc----CCCCHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLD------------D--------CNRRV----VQSLIASEW----YRCSPDT 67 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------~--------~~~~~----~f~~~~~~~----~~is~~~ 67 (201)
+.++.|++++.+.-|..|.+|+........ . ...+. .-......| ..++.+.
T Consensus 191 ~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (334)
T cd07855 191 TAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEA 270 (334)
T ss_pred cccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHH
Confidence 457889999999999899998854321000 0 00000 000001111 2367888
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 68 RRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 68 ~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
...+.++|..+| +.|..++++ ..|+|+..
T Consensus 271 ~~li~~~l~~~P---~~Rpt~~~~-l~~~~~~~ 299 (334)
T cd07855 271 LDLLSQMLQFDP---EERITVEQA-LQHPFLAQ 299 (334)
T ss_pred HHHHHHHccCCh---hhCcCHHHH-HhChhhhh
Confidence 889999998877 667788888 88998853
No 359
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=40.37 E-value=21 Score=29.19 Aligned_cols=80 Identities=9% Similarity=-0.059 Sum_probs=48.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccc-----------------cccceeec----c---cCC----cCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDC-----------------NRRVVQSL----I---ASE----WYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------------~~~~~f~~----~---~~~----~~~is~~~~ 68 (201)
.++.|++++-+.-|.+|.+|+.......... .......+ . ... ...++.+..
T Consensus 187 ~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T cd07834 187 AIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAI 266 (330)
T ss_pred chhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHH
Confidence 4788999988888889988875433210000 00000000 0 000 122677888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
+.+.++|..+| +-|..+.++ ..|+|+..
T Consensus 267 ~li~~~l~~~P---~~Rpt~~~l-l~~~~~~~ 294 (330)
T cd07834 267 DLLEKMLVFDP---KKRITADEA-LAHPYLAQ 294 (330)
T ss_pred HHHHHHccCCh---hhCCCHHHH-HhCccHHh
Confidence 88999998877 557788888 88888853
No 360
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=40.28 E-value=43 Score=26.87 Aligned_cols=79 Identities=13% Similarity=-0.000 Sum_probs=46.9
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccc------------c---cceeec------------ccCCcCCCCHHHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCN------------R---RVVQSL------------IASEWYRCSPDTR 68 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------~---~~~f~~------------~~~~~~~is~~~~ 68 (201)
+.++.|++++-+.-|..|.+++...+....... . ..+-.. .......++.+..
T Consensus 206 ~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (311)
T cd07866 206 TAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGL 285 (311)
T ss_pred chhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHH
Confidence 347889999888888889988754332110000 0 000000 0001123557788
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
+++.++|..+| +.|..+.++ ..|+|+
T Consensus 286 ~~i~~~l~~~p---~~R~t~~el-l~~~~f 311 (311)
T cd07866 286 DLLSKLLSLDP---YKRLTASDA-LEHPYF 311 (311)
T ss_pred HHHHHHcccCc---ccCcCHHHH-hcCCCC
Confidence 89999998877 447777888 788775
No 361
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=40.02 E-value=18 Score=29.87 Aligned_cols=80 Identities=9% Similarity=-0.117 Sum_probs=48.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc---cceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR---RVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
-++.|++++-++-|..|..|+...+........ ...+.+. .....++.+....+.++|.... ...-|..+.++ +
T Consensus 188 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~li~~ll~~~~-~r~~r~~~~~~-l 264 (331)
T cd05597 188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP-PDVTDVSEEAKDLIRRLICSPE-TRLGRNGLQDF-K 264 (331)
T ss_pred cceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC-CccCCCCHHHHHHHHHHccCcc-cccCCCCHHHH-h
Confidence 468899999999999999998654321110000 1111111 1223488888888888775422 21234567788 8
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|+|+.
T Consensus 265 ~hp~~~ 270 (331)
T cd05597 265 DHPFFE 270 (331)
T ss_pred cCCCCC
Confidence 999984
No 362
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=39.94 E-value=13 Score=30.54 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=49.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCCChhHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQMPGHLRF-----MCG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~s~~~~~~-----~~~ 89 (201)
+.++.|++++-+.-|..|..|+........ ...+. ..... ...++++....+.++|..+| +.|. .+.
T Consensus 175 ~~~DiwslG~il~el~tG~~Pf~~~~~~~~---~~~i~-~~~~~~p~~~~~~~~~li~~~L~~dP---~~R~~~~~~~~~ 247 (325)
T cd05594 175 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELIL-MEEIRFPRTLSPEAKSLLSGLLKKDP---KQRLGGGPDDAK 247 (325)
T ss_pred CccccccccceeeeeccCCCCCCCCCHHHH---HHHHh-cCCCCCCCCCCHHHHHHHHHHhhcCH---HHhCCCCCCCHH
Confidence 457889999999999999998854322110 01100 01111 13488899999999998877 4453 677
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
++ ..|+|+.
T Consensus 248 ~i-l~h~~~~ 256 (325)
T cd05594 248 EI-MQHKFFA 256 (325)
T ss_pred HH-hcCCCcC
Confidence 77 7899984
No 363
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=39.70 E-value=10 Score=29.59 Aligned_cols=80 Identities=10% Similarity=0.020 Sum_probs=45.7
Q ss_pred CCcchhHHHHHHHHhHhcCCcceeeecc-ccccccccce---eecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHH
Q psy10243 15 LPITQRVTILIEFIFINVGYLHLTLESE-KLDDCNRRVV---QSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGL 90 (201)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~---f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~ 90 (201)
-.-++-|++++.++.|.+|..|+..... .......+.. .......+...+.+....+.++|..+| +.|..+.+
T Consensus 177 ~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~R~~~~~ 253 (260)
T PF00069_consen 177 TRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDP---EQRPSAEE 253 (260)
T ss_dssp STHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSG---GGSTTHHH
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCCh---hHCcCHHH
Confidence 4456788999999999999887764310 0001011111 111111111123666677777777766 56777888
Q ss_pred HhccCccc
Q psy10243 91 VRLDLGFM 98 (201)
Q Consensus 91 ~d~~~~~~ 98 (201)
+ ..|||+
T Consensus 254 l-~~~~~~ 260 (260)
T PF00069_consen 254 L-LKHPWF 260 (260)
T ss_dssp H-HTSGGG
T ss_pred H-hcCCCC
Confidence 8 788875
No 364
>COG4807 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.64 E-value=1.5e+02 Score=21.69 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=29.3
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
...++-||.. -..++..++...+.++|.-|+..+|+.-|
T Consensus 90 LkKLRiAf~l---------K~~Dm~~I~~~~~f~vS~pElsAlfR~~~ 128 (155)
T COG4807 90 LKKLRIAFSL---------KTDDMLAILTEQQFRVSMPELSALFRAPD 128 (155)
T ss_pred HHhHhHhhhc---------ccchHHHHHhccCcccccHHHHHHHhCCC
Confidence 4566677764 23467888888889999999999998765
No 365
>KOG0612|consensus
Probab=39.59 E-value=34 Score=33.90 Aligned_cols=77 Identities=10% Similarity=-0.026 Sum_probs=53.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccc---cccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH---HH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLD---DCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM---CG 89 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~---~~ 89 (201)
+-=+-|+++|-++=|.||-.||..++--.+ ....+.-|+|-+. ..||.+++..|-+.+.-. +.|.- +.
T Consensus 260 ~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~--~~VSeeakdLI~~ll~~~----e~RLgrngie 333 (1317)
T KOG0612|consen 260 RECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDE--TDVSEEAKDLIEALLCDR----EVRLGRNGIE 333 (1317)
T ss_pred CccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcc--cccCHHHHHHHHHHhcCh----hhhcccccHH
Confidence 334679999999999999999997664322 1123345666532 239999999998887542 44444 77
Q ss_pred HHhccCcccc
Q psy10243 90 LVRLDLGFMI 99 (201)
Q Consensus 90 ~~d~~~~~~~ 99 (201)
.+ .+||||.
T Consensus 334 di-k~HpFF~ 342 (1317)
T KOG0612|consen 334 DI-KNHPFFE 342 (1317)
T ss_pred HH-HhCcccc
Confidence 77 7888883
No 366
>PF02337 Gag_p10: Retroviral GAG p10 protein; InterPro: IPR003322 Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different. This entry represents matrix proteins from beta-retroviruses such as Mason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus) and Mouse mammary tumor virus (MMTV) [, ]. This entry also identifies matrix proteins from several eukaryotic endogenous retroviruses, which arise when one or more copies of the retroviral genome becomes integrated into the host genome [].; GO: 0005198 structural molecule activity, 0019028 viral capsid; PDB: 2F77_X 2F76_X.
Probab=39.49 E-value=1.2e+02 Score=20.55 Aligned_cols=47 Identities=11% Similarity=0.001 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHH
Q psy10243 66 DTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMI 114 (201)
Q Consensus 66 ~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~ 114 (201)
+.+..+++.-|...+.+++...+..++.-.||+... |+|+......+
T Consensus 12 ~~Lk~lLk~rGi~v~~~~L~~f~~~i~~~~PWF~~e--G~l~~~~W~kv 58 (90)
T PF02337_consen 12 SILKHLLKERGIRVKKKDLINFLSFIDKVCPWFPEE--GTLDLDNWKKV 58 (90)
T ss_dssp HHHHHHHHCCT----HHHHHHHHHHHHHHTT-SS----SS-HHHHHHHH
T ss_pred HHHHHHHHHcCeeecHHHHHHHHHHHHHhCCCCCCC--CCcCHHHHHHH
Confidence 456666666788899999999999999999999875 56776665543
No 367
>PF13623 SurA_N_2: SurA N-terminal domain
Probab=39.47 E-value=1.5e+02 Score=21.79 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=31.3
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHh----------hCCCCCCcccHHHHHHH
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAV----------ADQEGLGYIRYEDFVQV 197 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~----------~d~~~~g~I~~~eF~~~ 197 (201)
|...=+.+-+.++|..++++|+..++.. +-.+..|..+-..|.++
T Consensus 90 V~~~ll~~e~eklGi~Vs~~El~d~l~~g~~p~~~~~~~f~~~tG~Fd~~~l~~f 144 (145)
T PF13623_consen 90 VQNILLEQEFEKLGITVSDDELQDMLNQGTNPMLQQNPFFNPQTGQFDRAKLKQF 144 (145)
T ss_pred HHHHHHHHHHHHhCCccCHHHHHHHHhcCCCchhhhccccCcccCCcCHHHHHhh
Confidence 4555566667788999999999888821 22356788887766554
No 368
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=39.43 E-value=27 Score=27.79 Aligned_cols=78 Identities=10% Similarity=-0.060 Sum_probs=48.2
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeec-ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL-IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+-++.|++++.+.-|.+|.+|+......... ...... ...-...++.+....+.+++..+| +.|..+.++ ..
T Consensus 180 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~ 252 (277)
T cd06640 180 SKADIWSLGITAIELAKGEPPNSDMHPMRVL---FLIPKNNPPTLTGEFSKPFKEFIDACLNKDP---SFRPTAKEL-LK 252 (277)
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCcChHhHh---hhhhcCCCCCCchhhhHHHHHHHHHHcccCc---ccCcCHHHH-Hh
Confidence 3578899999999999999887643211100 000000 000112256677788888888876 557788888 88
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|+|+.+
T Consensus 253 ~~~~~~ 258 (277)
T cd06640 253 HKFIVK 258 (277)
T ss_pred ChHhhh
Confidence 877743
No 369
>KOG1954|consensus
Probab=39.33 E-value=46 Score=29.02 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=41.1
Q ss_pred HHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHH
Q psy10243 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195 (201)
Q Consensus 139 ~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~ 195 (201)
-++|-.+-+ -+|+||-..-+..+.. ..+++..+-.+++..|.|.||.++-+||.
T Consensus 447 de~fy~l~p-~~gk~sg~~ak~~mv~--sklpnsvlgkiwklad~d~dg~ld~eefa 500 (532)
T KOG1954|consen 447 DEIFYTLSP-VNGKLSGRNAKKEMVK--SKLPNSVLGKIWKLADIDKDGMLDDEEFA 500 (532)
T ss_pred Hhhhhcccc-cCceeccchhHHHHHh--ccCchhHHHhhhhhhcCCcccCcCHHHHH
Confidence 345555433 3678887777766543 45788899999999999999999999996
No 370
>PLN00138 large subunit ribosomal protein LP2; Provisional
Probab=39.30 E-value=1.1e+02 Score=21.77 Aligned_cols=36 Identities=8% Similarity=0.390 Sum_probs=31.1
Q ss_pred cCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 147 KDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 147 ~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
..++-.+|.++++.+|...|..+....+..+++.+.
T Consensus 12 l~g~~~pta~dI~~IL~AaGvevd~~~~~~f~~~L~ 47 (113)
T PLN00138 12 LGGNTCPSAEDLKDILGSVGADADDDRIELLLSEVK 47 (113)
T ss_pred hcCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHHc
Confidence 355667999999999999999999999998888885
No 371
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=38.80 E-value=24 Score=27.98 Aligned_cols=77 Identities=12% Similarity=-0.140 Sum_probs=43.4
Q ss_pred chhHHHHHHHHhHhcCCcceeeecccccccccc-------------------ceee-cc----cCCcCCCCHHHHHHHHH
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDDCNRR-------------------VVQS-LI----ASEWYRCSPDTRRCLLM 73 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------------~~f~-~~----~~~~~~is~~~~~~il~ 73 (201)
++.|++++-+.-|.+|.+++...+......... ..+. .. ......++.+..+.+.+
T Consensus 187 ~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 266 (287)
T cd07838 187 VDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKK 266 (287)
T ss_pred chhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHH
Confidence 678888888888889988887654321110000 0000 00 00001245667778888
Q ss_pred HhCCCCChhHHHHHHHHHhccCccc
Q psy10243 74 TLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 74 ~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
++..+| ..|..+.++ ..|+|+
T Consensus 267 ~l~~dp---~~Rp~~~~i-l~~~~~ 287 (287)
T cd07838 267 MLTFNP---HKRISAFEA-LQHPYF 287 (287)
T ss_pred HhccCC---ccCCCHHHH-hcCcCC
Confidence 887766 445666666 666664
No 372
>PF09336 Vps4_C: Vps4 C terminal oligomerisation domain; InterPro: IPR015415 This domain is found at the C-terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerisation []. ; PDB: 1XWI_A 3EIH_C 2QPA_C 3EIE_A 2RKO_A 2QP9_X 3MHV_C 3CF3_C 3CF1_A 3CF2_A ....
Probab=38.72 E-value=41 Score=20.96 Aligned_cols=26 Identities=8% Similarity=0.336 Sum_probs=21.3
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHH
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAM 177 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i 177 (201)
.|+.++|..+|+.....++.++++..
T Consensus 29 ~it~~DF~~Al~~~kpSVs~~dl~~y 54 (62)
T PF09336_consen 29 PITMEDFEEALKKVKPSVSQEDLKKY 54 (62)
T ss_dssp HBCHHHHHHHHHTCGGSS-HHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCHHHHHHH
Confidence 58899999999998888998888764
No 373
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=38.71 E-value=35 Score=27.02 Aligned_cols=76 Identities=11% Similarity=-0.045 Sum_probs=47.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++-|++++.+.-|..|.+|+........ ...+..-..... ..++.+..+.+.+++..+| +.|..+.++ ..|
T Consensus 181 ~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~~ 253 (277)
T cd06642 181 KADIWSLGITAIELAKGEPPNSDLHPMRV---LFLIPKNSPPTLEGQYSKPFKEFVEACLNKDP---RFRPTAKEL-LKH 253 (277)
T ss_pred hhhHHHHHHHHHHHHhCCCCCcccchhhH---HhhhhcCCCCCCCcccCHHHHHHHHHHccCCc---ccCcCHHHH-HHh
Confidence 47889999999999999988653221100 000000001111 2367778888888998877 557788888 778
Q ss_pred cccc
Q psy10243 96 GFMI 99 (201)
Q Consensus 96 ~~~~ 99 (201)
+|+.
T Consensus 254 ~~~~ 257 (277)
T cd06642 254 KFIT 257 (277)
T ss_pred HHHH
Confidence 7764
No 374
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=38.32 E-value=17 Score=26.03 Aligned_cols=50 Identities=24% Similarity=0.363 Sum_probs=24.8
Q ss_pred CCcceeHHHHHHHHHHh--CCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy10243 149 GDGIINVAELRHVMTNL--GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~l--g~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l 198 (201)
-||.++.+|...+...+ ...++..+...++..++.......++.+|+..+
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 87 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADELKQEPIDLEELLREL 87 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHHHHHCCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 46667777766655544 233445555555555543333345555555443
No 375
>PF06648 DUF1160: Protein of unknown function (DUF1160); InterPro: IPR010594 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf75; it is a family of uncharacterised viral proteins.
Probab=38.29 E-value=1.5e+02 Score=21.38 Aligned_cols=48 Identities=21% Similarity=0.374 Sum_probs=35.9
Q ss_pred CcccHHHHHHHhhhhCcCCCcceeHHHHHHHHHHh-CCCCCHHHHHHHHHhh
Q psy10243 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIAVA 181 (201)
Q Consensus 131 ~~~~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l-g~~~s~~ei~~i~~~~ 181 (201)
.....+++..+|++|-. |.|+.+.+-.++... |..+|..++..+...+
T Consensus 32 d~tf~~Kl~~Il~mFl~---~eid~e~~y~l~~~~d~~~LT~~Qi~Yl~~~~ 80 (122)
T PF06648_consen 32 DETFLDKLIKILKMFLN---DEIDVEDMYNLFGAVDGLKLTRSQIDYLYNRV 80 (122)
T ss_pred CchHHHHHHHHHHHHHh---CCCCHHHHHHHHhcccHhhcCHHHHHHHHHHH
Confidence 33447788899999875 459999999988876 5788888776666554
No 376
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=37.71 E-value=46 Score=26.34 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=46.6
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccc-----------ccccee---------ecc--------cCCcCC-CCHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDC-----------NRRVVQ---------SLI--------ASEWYR-CSPD 66 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~f---------~~~--------~~~~~~-is~~ 66 (201)
..++.|++++-+.-|..|.+++...+...... .....+ .+. ...... ++.+
T Consensus 181 ~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T cd07833 181 KPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSP 260 (288)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchH
Confidence 34688999999999999988775332110000 000000 000 001122 4788
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 67 TRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 67 ~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
...++.+++..+| +.|..++++ ..++|+
T Consensus 261 ~~~li~~~l~~~p---~~Rps~~~i-l~~~~f 288 (288)
T cd07833 261 ALDFLKACLRMDP---KERLTCDEL-LQHPYF 288 (288)
T ss_pred HHHHHHHHhccCc---hhcccHHHH-hcCCCC
Confidence 8888889998877 567778888 777764
No 377
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=37.63 E-value=20 Score=29.48 Aligned_cols=79 Identities=8% Similarity=-0.155 Sum_probs=48.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChh-HHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPG-HLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~-~~~~~~~~~d~~~ 95 (201)
.++.|++++-++.|.+|.+|+....... ....+......-...++.+..+.+.++|..+|... ..+..+.++ ..|
T Consensus 176 ~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i-l~~ 251 (323)
T cd05575 176 TVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEI-KNH 251 (323)
T ss_pred cccccccchhhhhhhcCCCCCCCCCHHH---HHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHH-HcC
Confidence 4788999999999999999987533211 11111111111123488999999999998876321 011234566 788
Q ss_pred cccc
Q psy10243 96 GFMI 99 (201)
Q Consensus 96 ~~~~ 99 (201)
+|+.
T Consensus 252 ~~~~ 255 (323)
T cd05575 252 VFFS 255 (323)
T ss_pred CCcC
Confidence 8883
No 378
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=37.12 E-value=18 Score=30.00 Aligned_cols=81 Identities=9% Similarity=-0.113 Sum_probs=48.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeecccccccccc---ceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHh
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRR---VVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVR 92 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d 92 (201)
+.++.|++++-++-|.+|..|+............. .-+.+ ......++.+..+.+.++|...+ ..--+..++++
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~~~~~~~li~~ll~~~~-~~~~~~~~~~~- 263 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHITDVSEEAKDLIQRLICSRE-RRLGQNGIEDF- 263 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC-CCccccCCHHHHHHHHHHccCch-hhcCCCCHHHH-
Confidence 35689999999999999999987543221110000 00111 12223478888888888776432 11123456777
Q ss_pred ccCcccc
Q psy10243 93 LDLGFMI 99 (201)
Q Consensus 93 ~~~~~~~ 99 (201)
..|+|+.
T Consensus 264 ~~h~~f~ 270 (331)
T cd05624 264 KKHAFFE 270 (331)
T ss_pred hcCCCcC
Confidence 8899883
No 379
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=36.52 E-value=36 Score=27.67 Aligned_cols=80 Identities=13% Similarity=-0.070 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+.-+..|..|+.............. ..........++......+.+++..+| +-|..+.++ ..++
T Consensus 194 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P---~~Rp~~~~l-l~~~ 268 (308)
T cd06634 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIP---QDRPTSEVL-LKHR 268 (308)
T ss_pred ccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCcCcccccHHHHHHHHHHhhCCc---ccCCCHHHH-hhCc
Confidence 57889999999999999988653221110000000 000111123477788888888998877 457778888 8888
Q ss_pred ccccc
Q psy10243 97 FMINV 101 (201)
Q Consensus 97 ~~~~~ 101 (201)
|+...
T Consensus 269 ~~~~~ 273 (308)
T cd06634 269 FVLRE 273 (308)
T ss_pred ccccc
Confidence 88653
No 380
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=36.14 E-value=47 Score=25.97 Aligned_cols=63 Identities=6% Similarity=-0.080 Sum_probs=36.4
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccc-eeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRV-VQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
.++.|++++-+.-|.+|..|+............+. ........+..++.+....+.+++..+|
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 249 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 249 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCc
Confidence 47899999999999999999864332111100010 0111112223466777777777777655
No 381
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=36.01 E-value=41 Score=26.69 Aligned_cols=77 Identities=10% Similarity=-0.025 Sum_probs=47.8
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+..+..|.+|+........ ...+..-....- ..++.+..+.+.+++..+| +.|..+.++ ..|
T Consensus 181 ~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~Rp~~~~~-l~~ 253 (277)
T cd06641 181 KADIWSLGITAIELAKGEPPHSELHPMKV---LFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP---SFRPTAKEL-LKH 253 (277)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCccchHHH---HHHHhcCCCCCCCcccCHHHHHHHHHHccCCh---hhCcCHHHH-HhC
Confidence 46889999999999999988753221110 000100001111 2367788888888888876 557778888 778
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+.+
T Consensus 254 ~~~~~ 258 (277)
T cd06641 254 KFIVR 258 (277)
T ss_pred HHHhh
Confidence 77743
No 382
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=35.86 E-value=42 Score=26.06 Aligned_cols=76 Identities=8% Similarity=0.003 Sum_probs=45.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++-|++++-+.-+..|-.|+...... .................++.+..+.+.+++..+| +-|..+.++ ..|+
T Consensus 182 ~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~~-l~~~ 255 (257)
T cd08223 182 KSDVWALGCCVYEMATLKHAFNAKDMN--SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRP---EKRPSVKSI-LRQP 255 (257)
T ss_pred hhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCc---ccCCCHHHH-hcCC
Confidence 467888888888888887776532211 1000111111111223478888888888998877 556677777 7777
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 256 ~~ 257 (257)
T cd08223 256 YI 257 (257)
T ss_pred CC
Confidence 64
No 383
>KOG0998|consensus
Probab=35.85 E-value=19 Score=34.60 Aligned_cols=62 Identities=24% Similarity=0.426 Sum_probs=52.3
Q ss_pred HHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHHHHh
Q psy10243 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199 (201)
Q Consensus 136 ~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~~l~ 199 (201)
......|+..|..++|.|+..+....+...| +....+-+++...|..+.|.++..+|...+.
T Consensus 11 ~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~--L~~qvl~qiws~~d~~~~g~l~~q~f~~~lr 72 (847)
T KOG0998|consen 11 PLFDQYFKSADPQGDGRITGAEAVAFLSKSG--LPDQVLGQIWSLADSSGKGFLNRQGFYAALR 72 (847)
T ss_pred chHHHhhhccCcccCCcccHHHhhhhhhccc--cchhhhhccccccccccCCccccccccccch
Confidence 3456789999999999999999999888766 6788888899999998889898888876554
No 384
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=35.63 E-value=37 Score=26.79 Aligned_cols=76 Identities=12% Similarity=0.038 Sum_probs=44.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeec----cc--------------------------CCcCC-CC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL----IA--------------------------SEWYR-CS 64 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~----~~--------------------------~~~~~-is 64 (201)
+.++.|++++-+.-|..|..|+........ ...++.. .. ..... .+
T Consensus 181 ~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07840 181 PEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLID 257 (287)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCC
Confidence 347889999888888899888754332100 0000000 00 00011 37
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHhccCccc
Q psy10243 65 PDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFM 98 (201)
Q Consensus 65 ~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~ 98 (201)
.+.+..+.+++..+| +.|..+.++ ..++|+
T Consensus 258 ~~~~~~i~~~l~~~P---~~Rp~~~~~-l~~~~~ 287 (287)
T cd07840 258 PSALDLLDKLLTLDP---KKRISADQA-LQHEYF 287 (287)
T ss_pred HHHHHHHHHHcCCCh---hhCcCHHHH-hhCcCC
Confidence 778888888888876 556667777 666664
No 385
>PRK14981 DNA-directed RNA polymerase subunit F; Provisional
Probab=35.43 E-value=71 Score=22.46 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=20.1
Q ss_pred eHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q psy10243 154 NVAELRHVMTNLGEKLTEEEVDAMIAVA 181 (201)
Q Consensus 154 s~~el~~~l~~lg~~~s~~ei~~i~~~~ 181 (201)
+.+|++.++.+....++++++++++..+
T Consensus 80 ~~dElrai~~~~~~~~~~e~l~~ILd~l 107 (112)
T PRK14981 80 TRDELRAIFAKERYTLSPEELDEILDIV 107 (112)
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 4677777777776677777777777654
No 386
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=35.08 E-value=40 Score=22.17 Aligned_cols=32 Identities=16% Similarity=0.428 Sum_probs=21.4
Q ss_pred CCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 149 GDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
..|+||..++..+|.. ..++.+.++.++..+.
T Consensus 18 ~~G~lT~~eI~~~L~~--~~~~~e~id~i~~~L~ 49 (82)
T PF03979_consen 18 KKGYLTYDEINDALPE--DDLDPEQIDEIYDTLE 49 (82)
T ss_dssp HHSS-BHHHHHHH-S---S---HHHHHHHHHHHH
T ss_pred hcCcCCHHHHHHHcCc--cCCCHHHHHHHHHHHH
Confidence 4789999999999864 3377888888888764
No 387
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=34.70 E-value=57 Score=23.52 Aligned_cols=28 Identities=25% Similarity=0.379 Sum_probs=20.6
Q ss_pred HHHHhhhhCcCCCcceeHHHHHHHHHHh
Q psy10243 138 LLEAFRVFDKDGDGIINVAELRHVMTNL 165 (201)
Q Consensus 138 l~~~F~~~D~~~~G~Is~~el~~~l~~l 165 (201)
+......||++++|.|+.-.++.++..+
T Consensus 99 ln~Ll~vyD~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 99 LNWLLNVYDSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp HHHHHHHH-TT--SEEEHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCeeehhHHHHHHHHh
Confidence 4456789999999999999999988654
No 388
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=34.37 E-value=32 Score=31.96 Aligned_cols=77 Identities=8% Similarity=-0.018 Sum_probs=51.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeec--ccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSL--IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~--~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
+..+.|++++-++-|..|..|+........ ....+..- .......++.+....+.++|..+| +.|..+.++ +
T Consensus 559 ~~~DiwSlG~il~ElltG~~pf~~~~~~~~--~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP---~~R~ta~e~-l 632 (669)
T cd05610 559 PAVDWWALGVCLFEFLTGIPPFNDETPQQV--FQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDP---TKRAGLKEL-K 632 (669)
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHhcCCCCCcccccCCHHHHHHHHHHcccCh---hHCcCHHHH-H
Confidence 457899999999999999988864432211 11111100 000112467788888888888877 778889999 8
Q ss_pred cCccc
Q psy10243 94 DLGFM 98 (201)
Q Consensus 94 ~~~~~ 98 (201)
.|+|+
T Consensus 633 ~h~~~ 637 (669)
T cd05610 633 QHPLF 637 (669)
T ss_pred hCHhh
Confidence 99988
No 389
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=34.05 E-value=26 Score=28.81 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
.+.+..+.+.++|..+| +.|..+.++ ..|+|+.
T Consensus 280 ~~~~~~~li~~~l~~dP---~~Rpta~e~-l~~~~~~ 312 (328)
T cd08226 280 FSPAFQNLVELCLQQDP---EKRPSASSL-LSHAFFK 312 (328)
T ss_pred hhHHHHHHHHHHccCCc---ccCCCHHHH-hhCHHHH
Confidence 56677788888888877 667888888 8888774
No 390
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=33.83 E-value=28 Score=27.56 Aligned_cols=24 Identities=4% Similarity=-0.209 Sum_probs=19.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeee
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLE 40 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~ 40 (201)
.++.|++++-+.-+..|.+|+...
T Consensus 181 ~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 181 SIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCC
Confidence 467899999999999999887643
No 391
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=33.77 E-value=52 Score=26.20 Aligned_cols=79 Identities=11% Similarity=0.033 Sum_probs=47.6
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccc-ccccceee----cc-----cCCcCCCCHHHHHHHHHHhCCCCChhHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDD-CNRRVVQS----LI-----ASEWYRCSPDTRRCLLMTLRQAQMPGHLRF 86 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~f~----~~-----~~~~~~is~~~~~~il~~L~~~~s~~~~~~ 86 (201)
-++-|++++-+.-+..|.+|+......... .....++. .. ......++.+..+.+.+++..+| +-|.
T Consensus 182 ~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rp 258 (284)
T cd06620 182 KSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDP---TERP 258 (284)
T ss_pred cchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCc---ccCc
Confidence 467899998888888899998754432110 00000000 00 00112266777888888888877 5577
Q ss_pred HHHHHhccCcccc
Q psy10243 87 MCGLVRLDLGFMI 99 (201)
Q Consensus 87 ~~~~~d~~~~~~~ 99 (201)
.+.++ ..++|+.
T Consensus 259 t~~e~-~~~~~~~ 270 (284)
T cd06620 259 TPQQL-CAMPPFI 270 (284)
T ss_pred CHHHH-hcCcccc
Confidence 78888 7776664
No 392
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=33.02 E-value=1.7e+02 Score=20.29 Aligned_cols=60 Identities=15% Similarity=0.227 Sum_probs=38.8
Q ss_pred cHHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCC---CCCCcccHHHHHHHH
Q psy10243 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQ---EGLGYIRYEDFVQVM 198 (201)
Q Consensus 134 ~~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~---~~~g~I~~~eF~~~l 198 (201)
-...+..-|..+-. +|+++..+|.+++ |..-|.+-+.++|..+.. -....|+-+|...+.
T Consensus 28 ~W~~VE~RFd~La~--dG~L~rs~Fg~CI---GM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW 90 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK--DGLLPRSDFGECI---GMKDSKEFAGELFDALARRRGIKGDSITKDELKEFW 90 (100)
T ss_dssp -HHHHHHHHHHH-B--TTBEEGGGHHHHH---T--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHH
T ss_pred CHHHHHHHHHHhCc--CCcccHHHHHHhc---CCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHH
Confidence 36777788888866 8999999999886 655567777777766532 124578877766543
No 393
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=32.79 E-value=15 Score=30.10 Aligned_cols=77 Identities=10% Similarity=0.009 Sum_probs=48.5
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHH-----HHH
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFM-----CGL 90 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~-----~~~ 90 (201)
..++.|++++-++-|..|..|+........ ...+..-...-...++.+....+.++|..+| +.|.. +.+
T Consensus 177 ~~~DiwslG~il~el~tg~~p~~~~~~~~~---~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P---~~R~~a~~~~~~~ 250 (318)
T cd05582 177 QSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTMILKAKLGMPQFLSPEAQSLLRALFKRNP---ANRLGAGPDGVEE 250 (318)
T ss_pred CccceeccceEeeeeccCCCCCCCCCHHHH---HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCH---hHcCCCCCCCHHH
Confidence 357889998888888899988865432211 1111110001112378888899999998877 44443 666
Q ss_pred HhccCcccc
Q psy10243 91 VRLDLGFMI 99 (201)
Q Consensus 91 ~d~~~~~~~ 99 (201)
+ ..|+|+.
T Consensus 251 ~-~~~~~~~ 258 (318)
T cd05582 251 I-KRHPFFS 258 (318)
T ss_pred H-hCCCCcC
Confidence 7 7899884
No 394
>PHA02105 hypothetical protein
Probab=32.54 E-value=89 Score=19.33 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=27.6
Q ss_pred ceeHHHHHHHHHHhC---CCCCHHHHHHHHHhhCCCC--CCcccHHHHHHHH
Q psy10243 152 IINVAELRHVMTNLG---EKLTEEEVDAMIAVADQEG--LGYIRYEDFVQVM 198 (201)
Q Consensus 152 ~Is~~el~~~l~~lg---~~~s~~ei~~i~~~~d~~~--~g~I~~~eF~~~l 198 (201)
+++++|++.++..-. .++..+.++.+-..+.... --.++|+||..+|
T Consensus 4 klt~~~~~~a~~~ndq~eyp~~~e~~~ql~svfsipqi~yvyls~~e~~si~ 55 (68)
T PHA02105 4 KLTKEDWESAKYQNDQNEYPVELELFDQLKTVFSIPQIKYVYLSYEEFNSIM 55 (68)
T ss_pred eecHHHHHHHHHcCccccccccHHHHHHHHHhccccceEEEEEeHHHhcccc
Confidence 366777777765422 3455565666555555443 2357888887654
No 395
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=32.33 E-value=60 Score=25.00 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=34.1
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHH
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~ 179 (201)
.+.++++|.-||...=-..+.+++.+++..-+.--+...++.++.
T Consensus 52 r~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d~~IIRnr~KI~Avi~ 96 (179)
T TIGR00624 52 RENYRRAFSGFDIVKVARMTDADVERLLQDDGIIRNRGKIEATIA 96 (179)
T ss_pred HHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccchhhHHHHHHHHH
Confidence 778899999999998888899999999887664444444544444
No 396
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=32.30 E-value=43 Score=26.01 Aligned_cols=45 Identities=16% Similarity=0.272 Sum_probs=33.4
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHH
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~ 179 (201)
.+.++++|.-||...=-..+.+++.+++..-+.--+...++.++.
T Consensus 53 re~fr~aF~~Fd~~~VA~~~e~die~Ll~d~~IIRnr~KI~Avi~ 97 (187)
T PRK10353 53 RENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIG 97 (187)
T ss_pred HHHHHHHHcCCCHHHHhCCCHHHHHHHhcCchhHHhHHHHHHHHH
Confidence 778999999999998878889999998877654334444444443
No 397
>PRK06402 rpl12p 50S ribosomal protein L12P; Reviewed
Probab=31.97 E-value=1.8e+02 Score=20.36 Aligned_cols=31 Identities=29% Similarity=0.470 Sum_probs=28.7
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
.||.+.+..+|...|..+.+..+..+++.+.
T Consensus 16 ~it~e~I~~IL~AAGveVee~~~k~~v~aL~ 46 (106)
T PRK06402 16 EINEDNLKKVLEAAGVEVDEARVKALVAALE 46 (106)
T ss_pred CCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 7999999999999999999999999998875
No 398
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=30.99 E-value=49 Score=25.69 Aligned_cols=74 Identities=12% Similarity=-0.099 Sum_probs=42.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++-|++++-+.-|.+|..++......... ......-.......++.+....+.+++..+| +-|..+.++ ..++
T Consensus 181 ~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p---~~R~s~~~l-l~~~ 254 (256)
T cd08221 181 KSDIWALGCVLYELLTLKRTFDATNPLNLV--VKIVQGNYTPVVSVYSSELISLVHSLLQQDP---EKRPTADEV-LDQP 254 (256)
T ss_pred cchhHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHcCCCCCCccccCHHHHHHHHHHcccCc---ccCCCHHHH-hhCc
Confidence 368899998888899999887543221111 0111110111113477888888888887766 334455555 4443
No 399
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=30.97 E-value=75 Score=25.31 Aligned_cols=24 Identities=13% Similarity=-0.186 Sum_probs=20.1
Q ss_pred cchhHHHHHHHHhHhcCCcceeee
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLE 40 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~ 40 (201)
-++.|++++-+.-+.+|.+|+...
T Consensus 184 ~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 184 ALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCc
Confidence 468899999999999999988643
No 400
>KOG4004|consensus
Probab=30.92 E-value=29 Score=27.32 Aligned_cols=29 Identities=21% Similarity=0.181 Sum_probs=24.0
Q ss_pred cHHHHHHHhhhhCcCCCcceeHHHHHHHH
Q psy10243 134 SGEELLEAFRVFDKDGDGIINVAELRHVM 162 (201)
Q Consensus 134 ~~~~l~~~F~~~D~~~~G~Is~~el~~~l 162 (201)
....+...|..+|.|+||+|+.+|....+
T Consensus 220 me~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 220 MEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred HHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 34566788999999999999999987664
No 401
>COG1460 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.71 E-value=84 Score=22.32 Aligned_cols=29 Identities=28% Similarity=0.519 Sum_probs=23.9
Q ss_pred eHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 154 NVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 154 s~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
|..|++.++.+-+..++++++++++.-.+
T Consensus 81 t~~ElRsIla~e~~~~s~E~l~~Ildiv~ 109 (114)
T COG1460 81 TPDELRSILAKERVMLSDEELDKILDIVD 109 (114)
T ss_pred CHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 67889999998888889999988876543
No 402
>COG3077 RelB DNA-damage-inducible protein J [DNA replication, recombination, and repair]
Probab=30.42 E-value=1.7e+02 Score=19.79 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHH
Q psy10243 66 DTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFV 112 (201)
Q Consensus 66 ~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~ 112 (201)
++-..++..+|.++|. -++.+...+ ..+ |.+.|+-.+
T Consensus 17 ~eA~~Vl~~mGlt~S~-airm~L~~v-a~~--------~~lPfdl~~ 53 (88)
T COG3077 17 EEATAVLEEMGLTISD-AIRMFLTKV-ARE--------GALPFDLRL 53 (88)
T ss_pred HHHHHHHHHhCCCHHH-HHHHHHHHH-HHc--------CCCCccccC
Confidence 4666788899998855 899999988 555 456655443
No 403
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=30.12 E-value=42 Score=29.57 Aligned_cols=76 Identities=12% Similarity=-0.031 Sum_probs=48.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
.++.|++++-+.-|.+|..|+...+... ................++.+....+.++|..+| +.|..+.++ ..++
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP---~~Rps~~~~-l~~~ 324 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQRE--IMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNP---ALRPTTQQL-LHTE 324 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCCCCccCCHHHHHHHHHHhccCh---hhCcCHHHH-HhCH
Confidence 4688999999999999999986433211 011111111111123488888999999998877 556666666 5565
Q ss_pred cc
Q psy10243 97 FM 98 (201)
Q Consensus 97 ~~ 98 (201)
|+
T Consensus 325 ~~ 326 (478)
T PTZ00267 325 FL 326 (478)
T ss_pred HH
Confidence 44
No 404
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=29.46 E-value=58 Score=26.34 Aligned_cols=79 Identities=13% Similarity=-0.067 Sum_probs=48.7
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccccccee-ecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQ-SLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f-~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
-++.|++++-+.-+..|.+|+......... ..... ..........+.+....+.+++..+| +-|..+.++ ..|
T Consensus 194 ~sDv~s~G~il~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~i-l~~ 267 (307)
T cd06607 194 KVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIP---QDRPSSEEL-LKH 267 (307)
T ss_pred ccchHHHHHHHHHHHcCCCCCCCccHHHHH--HHHhcCCCCCCCchhhCHHHHHHHHHHhcCCh---hhCcCHHHH-hcC
Confidence 478899999999999999887532211000 00000 00000012256677788888888877 557788888 889
Q ss_pred cccccc
Q psy10243 96 GFMINV 101 (201)
Q Consensus 96 ~~~~~~ 101 (201)
+|+...
T Consensus 268 ~~~~~~ 273 (307)
T cd06607 268 RFVLRE 273 (307)
T ss_pred hhhccc
Confidence 988654
No 405
>PF14164 YqzH: YqzH-like protein
Probab=29.17 E-value=1.5e+02 Score=18.70 Aligned_cols=45 Identities=9% Similarity=0.246 Sum_probs=29.5
Q ss_pred HHHHHHHhhhhCcC-CCcceeHHHHHHHHHHhC---CCCCHHHHHHHHH
Q psy10243 135 GEELLEAFRVFDKD-GDGIINVAELRHVMTNLG---EKLTEEEVDAMIA 179 (201)
Q Consensus 135 ~~~l~~~F~~~D~~-~~G~Is~~el~~~l~~lg---~~~s~~ei~~i~~ 179 (201)
...++++|+.+..| ..-.+|..|.+.+...+. ..-++.++.+++.
T Consensus 7 ~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~~Dl~eiVe 55 (64)
T PF14164_consen 7 EKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPDEDLHEIVE 55 (64)
T ss_pred HHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 34578899999887 677888888888776643 2223344444444
No 406
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=29.06 E-value=35 Score=28.09 Aligned_cols=80 Identities=11% Similarity=-0.035 Sum_probs=48.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccc------------ccc--------cc-cceeec-------ccCCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKL------------DDC--------NR-RVVQSL-------IASEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~--------~~-~~~f~~-------~~~~~~~is~~~~ 68 (201)
.++.|++++-+..+..|.+|+....... ... .. .....+ ...-+..++.+..
T Consensus 190 ~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (332)
T cd07857 190 AIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLAL 269 (332)
T ss_pred HHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHH
Confidence 4688999999988889988875432100 000 00 000000 0111234678888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
..+.++|..+| +.|..+.++ ..|+|+.+
T Consensus 270 ~li~~~l~~~P---~~R~t~~~l-l~~~~~~~ 297 (332)
T cd07857 270 DLLEKLLAFDP---TKRISVEEA-LEHPYLAI 297 (332)
T ss_pred HHHHHHccCCc---ccCCCHHHH-hcChhhhh
Confidence 88899998877 457778888 88888753
No 407
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=28.79 E-value=48 Score=29.51 Aligned_cols=77 Identities=8% Similarity=-0.033 Sum_probs=48.8
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+-++.|++++-++-|..|..|+....... ............-...++.+....+.++|..+| ..|..+.++ ..|
T Consensus 224 ~k~DVwSlGvilyeLltG~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP---~~RPs~~el-l~~ 297 (496)
T PTZ00283 224 KKADMFSLGVLLYELLTLKRPFDGENMEE--VMHKTLAGRYDPLPPSISPEMQEIVTALLSSDP---KRRPSSSKL-LNM 297 (496)
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCh---hhCcCHHHH-HhC
Confidence 44788999999999999999986432211 001111111111123488888899999998876 556666776 666
Q ss_pred ccc
Q psy10243 96 GFM 98 (201)
Q Consensus 96 ~~~ 98 (201)
+|+
T Consensus 298 p~~ 300 (496)
T PTZ00283 298 PIC 300 (496)
T ss_pred HHH
Confidence 655
No 408
>PHA03212 serine/threonine kinase US3; Provisional
Probab=28.62 E-value=36 Score=29.15 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
++.+....+.++|..+| +.|..+.++ +.|+|+..
T Consensus 348 ~~~~l~~Li~~mL~~dP---~~Rpta~el-L~hp~f~~ 381 (391)
T PHA03212 348 LPIDLEYLICKMLAFDA---HHRPSAEAL-LDFAAFQD 381 (391)
T ss_pred hhhhHHHHHHHHhcCCh---hhCCCHHHH-hcChhhcc
Confidence 45566777888888877 668888999 89999854
No 409
>TIGR00135 gatC glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit. This model has been revised to remove the candidate sequence from Methanococcus jannaschii, now part of a related model.
Probab=28.22 E-value=1e+02 Score=20.66 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=19.1
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHh
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAV 180 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~ 180 (201)
|+.++++.+.+-....+++++++.+...
T Consensus 1 i~~~~v~~lA~La~L~l~eee~~~~~~~ 28 (93)
T TIGR00135 1 ISDEEVKHLAKLARLELSEEEAESFAGD 28 (93)
T ss_pred CCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 4667777777766777887777665544
No 410
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=28.20 E-value=32 Score=28.28 Aligned_cols=79 Identities=6% Similarity=-0.151 Sum_probs=48.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChh-HHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPG-HLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~-~~~~~~~~~d~~ 94 (201)
..++-|++++.+.-|.+|.+|+........ ...+......-...++.+..+.+.++|..+|... .....+.++ .+
T Consensus 175 ~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i-~~ 250 (325)
T cd05602 175 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI-KN 250 (325)
T ss_pred CccccccccHHHHHHhcCCCCCCCCCHHHH---HHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH-hc
Confidence 357889999999999999999874332211 1111111111123588999999999998876221 012234455 67
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
|+|+
T Consensus 251 ~~~~ 254 (325)
T cd05602 251 HIFF 254 (325)
T ss_pred Cccc
Confidence 7776
No 411
>COG2058 RPP1A Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis]
Probab=28.17 E-value=2.2e+02 Score=20.06 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=33.0
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
.||.+.|+.++...|..+.+..++.+++.+.. ++.+|.+.
T Consensus 16 ei~e~~l~~vl~aaGveve~~r~k~lvaaLeg-----~~idE~i~ 55 (109)
T COG2058 16 EITEDNLKSVLEAAGVEVEEARAKALVAALEG-----VDIDEVIK 55 (109)
T ss_pred cCCHHHHHHHHHHcCCCccHHHHHHHHHHhcC-----CCHHHHHH
Confidence 89999999999999999999999999988862 35555443
No 412
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=27.80 E-value=1.3e+02 Score=17.52 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=20.4
Q ss_pred Cccee-HHHHHHHHHHhCCCCCHHHHHHHHHhh
Q psy10243 150 DGIIN-VAELRHVMTNLGEKLTEEEVDAMIAVA 181 (201)
Q Consensus 150 ~G~Is-~~el~~~l~~lg~~~s~~ei~~i~~~~ 181 (201)
.|.|+ ..++-+.|...|..++++.++.+++.+
T Consensus 15 ~GlI~~~~~~l~~l~~~g~~is~~l~~~~L~~~ 47 (48)
T PF11848_consen 15 RGLISEVKPLLDRLQQAGFRISPKLIEEILRRA 47 (48)
T ss_pred cCChhhHHHHHHHHHHcCcccCHHHHHHHHHHc
Confidence 46665 344444555667778888887777653
No 413
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=27.75 E-value=70 Score=26.50 Aligned_cols=80 Identities=9% Similarity=-0.051 Sum_probs=50.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeecccccccc-c-----------------------cceeec----ccCCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCN-R-----------------------RVVQSL----IASEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-----------------------~~~f~~----~~~~~~~is~~~~ 68 (201)
-++.|++++-++-+.+|.+|+........... . ..+... ...-+..++.+..
T Consensus 196 ~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (343)
T cd07880 196 TVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAV 275 (343)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHH
Confidence 46889999999989999988864321100000 0 000000 0011234788888
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCccccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN 100 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~ 100 (201)
..+.++|..+| ..|..+.++ ..|+|+..
T Consensus 276 ~li~~~l~~dP---~~R~t~~~~-l~~~~~~~ 303 (343)
T cd07880 276 NVLEKMLVLDA---ESRITAAEA-LAHPYFEE 303 (343)
T ss_pred HHHHHHcCCCh---hhCCCHHHH-hcCccHhh
Confidence 89999999877 567788888 88988854
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=27.27 E-value=1.4e+02 Score=24.90 Aligned_cols=56 Identities=14% Similarity=0.028 Sum_probs=33.9
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
..+-|.+++-++.+-||.+|+.+.+....... +|. ... .+...-...+...|..++
T Consensus 230 ~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----~f~-~C~-~~Pe~v~~LI~~lL~~~~ 285 (288)
T PF14531_consen 230 ATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----DFS-RCR-DMPEPVQFLIRGLLQRNP 285 (288)
T ss_dssp HHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----GGT-TSS----HHHHHHHHHHT-SSG
T ss_pred ccCHHHHHHHHHHHHHccCCCCCCCccccccc-----cch-hcC-CcCHHHHHHHHHHccCCc
Confidence 45789999999999999999998766544322 112 111 355556666666666644
No 415
>PF03352 Adenine_glyco: Methyladenine glycosylase; InterPro: IPR005019 This family of methyladenine glycosylases includes DNA-3-methyladenine glycosylase I (3.2.2.20 from EC) which acts as a base excision repair enzyme by severing the glycosylic bond of numerous damaged bases. The enzyme is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.; GO: 0008725 DNA-3-methyladenine glycosylase I activity, 0006284 base-excision repair; PDB: 2OFI_A 2OFK_A 2JG6_A 4AIA_E 4AI5_C 4AI4_A 1LMZ_A 1P7M_A 1NKU_A.
Probab=26.42 E-value=57 Score=25.12 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=32.3
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHhCCCCCHHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV 180 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~ 180 (201)
.+.++++|.-||.+.=-..+.+++.+++..-+.--+...++.++..
T Consensus 48 r~~~r~aF~~Fd~~~vA~~~e~~ie~l~~d~~iIRnr~KI~Avi~N 93 (179)
T PF03352_consen 48 REAFREAFAGFDPEKVAKMDEEDIERLMQDPGIIRNRRKIRAVINN 93 (179)
T ss_dssp HHHHHHHTGGGHHHHHHT--HHHHHHHTTSTTSS--HHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHcCCHHHHHHHhcCcchhhhHHHHHHHHHH
Confidence 7789999999999888888889999888776654455555555544
No 416
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=26.31 E-value=80 Score=24.54 Aligned_cols=60 Identities=7% Similarity=-0.107 Sum_probs=36.0
Q ss_pred cchhHHHHHHHHhHhc-CCcceeeeccccccccccceeeccc-CCcCCCCHHHHHHHHHHhCCCC
Q psy10243 17 ITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIA-SEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~is~~~~~~il~~L~~~~ 79 (201)
.++.|++++-+.-+.+ |++|+........ ...+-.... .....++....+.+.+++..+|
T Consensus 178 ~~Di~slG~~l~~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 239 (257)
T cd05060 178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEV---IAMLESGERLPRPEECPQEIYSIMLSCWKYRP 239 (257)
T ss_pred cchHHHHHHHHHHHHcCCCCCcccCCHHHH---HHHHHcCCcCCCCCCCCHHHHHHHHHHhcCCh
Confidence 5789999988888875 9999864322110 111111111 1123377788888888888765
No 417
>PRK10788 periplasmic folding chaperone; Provisional
Probab=26.09 E-value=4.4e+02 Score=24.25 Aligned_cols=46 Identities=4% Similarity=-0.142 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCccccccccccccHHHHHHH
Q psy10243 63 CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMI 114 (201)
Q Consensus 63 is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~ 114 (201)
|....+....+.+|..+++++++..+... +.++. +|..+-..|...
T Consensus 96 I~~~Ll~q~A~~lgi~vsd~ev~~~I~~~----p~Fq~--~G~Fd~~~y~~~ 141 (623)
T PRK10788 96 IDEALLDQYARELGLGISDEQVKQAIFAT----PAFQT--DGKFDNNKYLAI 141 (623)
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHHhC----ccccc--CCCcCHHHHHHH
Confidence 34444455566778889998888888775 22221 355555555543
No 418
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=25.94 E-value=86 Score=25.53 Aligned_cols=80 Identities=11% Similarity=-0.100 Sum_probs=47.4
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccC
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDL 95 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~ 95 (201)
+.++.|++++-+.-|..|.+|+......... ...............++......+.+++..+| .-|..+.++ ..+
T Consensus 203 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rpt~~~i-l~~ 277 (317)
T cd06635 203 GKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNESPTLQSNEWSDYFRNFVDSCLQKIP---QDRPTSEEL-LKH 277 (317)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCccHHHHH-HHHHhccCCCCCCccccHHHHHHHHHHccCCc---ccCcCHHHH-HhC
Confidence 3467899999999999999887543211100 00000001111112366777788888888876 556777777 777
Q ss_pred ccccc
Q psy10243 96 GFMIN 100 (201)
Q Consensus 96 ~~~~~ 100 (201)
+|+..
T Consensus 278 ~~~~~ 282 (317)
T cd06635 278 MFVLR 282 (317)
T ss_pred hhhhc
Confidence 76643
No 419
>PRK00034 gatC aspartyl/glutamyl-tRNA amidotransferase subunit C; Reviewed
Probab=25.81 E-value=1.2e+02 Score=20.28 Aligned_cols=29 Identities=24% Similarity=0.346 Sum_probs=21.5
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAVA 181 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~~ 181 (201)
|+.++++.+.+.....+++++++.+.+.+
T Consensus 3 i~~e~i~~la~La~l~l~~ee~~~~~~~l 31 (95)
T PRK00034 3 ITREEVKHLAKLARLELSEEELEKFAGQL 31 (95)
T ss_pred CCHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 67788888887777888888776655543
No 420
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=25.66 E-value=78 Score=24.76 Aligned_cols=76 Identities=9% Similarity=-0.067 Sum_probs=43.7
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc-CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW-YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++-|++++-+.-+.+|.+|+......... .+.......... ..++......+.+++. +| ..|..++++ ..
T Consensus 188 ~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p---~~Rp~~~~i-l~ 260 (265)
T cd06652 188 RKADIWSVGCTVVEMLTEKPPWAEFEAMAAI--FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EA---KLRPSADEL-LR 260 (265)
T ss_pred cchhHHHHHHHHHHHhhCCCCCCccchHHHH--HHHhcCCCCCCCchhhCHHHHHHHHHHhc-Ch---hhCCCHHHH-hc
Confidence 4478899999999999999987643221111 111111111111 2366666777777663 33 456667777 67
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
|+|+
T Consensus 261 ~~~~ 264 (265)
T cd06652 261 HTFV 264 (265)
T ss_pred Cccc
Confidence 7664
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=24.99 E-value=29 Score=25.37 Aligned_cols=25 Identities=12% Similarity=-0.165 Sum_probs=21.0
Q ss_pred CcchhHHHHHHHHhHhcCCcceeee
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLE 40 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~ 40 (201)
+.++-|++++.++-|..|.+|+...
T Consensus 83 ~~~DiwSlG~il~elltg~~p~~~~ 107 (176)
T smart00750 83 EKADIYSLGITLYEALDYELPYNEE 107 (176)
T ss_pred chhhHHHHHHHHHHHHhCCCCcccc
Confidence 4578899999999999999987644
No 422
>KOG4347|consensus
Probab=24.98 E-value=77 Score=29.37 Aligned_cols=56 Identities=21% Similarity=0.208 Sum_probs=41.6
Q ss_pred HHHHHHHHhccCccccccccccccHHHHHHHHHHHHHhhhhhhhhcCCcccHHHHHHHhhhhCcCCCcceeHHHH
Q psy10243 84 LRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAEL 158 (201)
Q Consensus 84 ~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~Is~~el 158 (201)
.+.++...|.++ .|.++|..++... ......+..+.+.-.|+.+|.+++ ....++.
T Consensus 557 ~~rlF~l~D~s~-------~g~Ltf~~lv~gL-----------~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 557 LERLFRLLDDSM-------TGLLTFKDLVSGL-----------SILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHhcccCC-------cceeEHHHHHHHH-----------HHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 556666666666 5889999998542 223344667889999999999999 8888887
No 423
>PF06384 ICAT: Beta-catenin-interacting protein ICAT; InterPro: IPR009428 This family consists of several eukaryotic beta-catenin-interacting (ICAT) proteins. Beta-catenin is a multifunctional protein involved in both cell adhesion and transcriptional activation. Transcription mediated by the beta-catenin/Tcf complex is involved in embryological development and is upregulated in various cancers. ICAT selectively inhibits beta-catenin/Tcf binding in vivo, without disrupting beta-catenin/cadherin interactions [].; GO: 0008013 beta-catenin binding; PDB: 1LUJ_B 1T08_B 1M1E_B.
Probab=24.91 E-value=94 Score=20.50 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHH
Q psy10243 156 AELRHVMTNLGEKLTEEEVDAMI 178 (201)
Q Consensus 156 ~el~~~l~~lg~~~s~~ei~~i~ 178 (201)
-|+-.+|+.+|..++++|..-+-
T Consensus 20 vEIL~ALrkLge~Ls~eE~~FL~ 42 (78)
T PF06384_consen 20 VEILTALRKLGEKLSPEEEAFLE 42 (78)
T ss_dssp HHHHHHHHHTT----HHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHH
Confidence 35678899999999988876443
No 424
>cd05831 Ribosomal_P1 Ribosomal protein P1. This subfamily represents the eukaryotic large ribosomal protein P1. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P1 is located in the L12 stalk, with proteins P2, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers) and bacteria may have four or six copies (two or three homodimers), depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2A, and
Probab=24.78 E-value=1.9e+02 Score=19.97 Aligned_cols=41 Identities=7% Similarity=0.068 Sum_probs=32.1
Q ss_pred cceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy10243 151 GIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196 (201)
Q Consensus 151 G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~~~g~I~~~eF~~ 196 (201)
-.+|.+++..+++..|..+....+..+.+.+.. .+.++++.
T Consensus 16 ~~~Tae~I~~ilkAaGveve~~~~~~f~~~L~g-----k~i~elIa 56 (103)
T cd05831 16 IEITADNINALLKAAGVNVEPYWPGLFAKALEG-----KDIKDLLS 56 (103)
T ss_pred CCCCHHHHHHHHHHcCCcccHHHHHHHHHHHcC-----CCHHHHhh
Confidence 369999999999999999988888877777742 45555553
No 425
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=24.62 E-value=1.7e+02 Score=21.35 Aligned_cols=50 Identities=16% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCcceeHHHHHHHHHHhC---------CCCCHHHHHHHHHhhCCCCCC-cccHHHHHHHH
Q psy10243 149 GDGIINVAELRHVMTNLG---------EKLTEEEVDAMIAVADQEGLG-YIRYEDFVQVM 198 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg---------~~~s~~ei~~i~~~~d~~~~g-~I~~~eF~~~l 198 (201)
++-.||.+||.++...-. ..++.++++.+.+.+...+.+ .++..|-+...
T Consensus 80 Gd~~Ls~eEf~~L~~~~~~LV~~rg~WV~ld~~~l~~~~~~~~~~~~~~~lt~~e~Lr~~ 139 (141)
T PF12419_consen 80 GDEELSEEEFEQLVEQKRPLVRFRGRWVELDPEELRRALAFLEKAPKGEKLTLAEALRAA 139 (141)
T ss_pred CCEECCHHHHHHHHHcCCCeEEECCEEEEECHHHHHHHHHHHHhccccCCCCHHHHHHHh
Confidence 667899999999987632 346899999999999876655 49998877653
No 426
>TIGR01309 L30P_arch 50S ribosomal protein L30P, archaeal. This model represents the archaeal ribosomal protein similar to longer (~ 250 residue) eukaryotic 60S ribosomal protein L7 and to the much shorter (~ 60 residue) bacterial 50S ribosomal protein L30. Protein naming follows the SwissProt designation as L30P, while the gene symbol rpmD follows TIGR usage.
Probab=24.59 E-value=2.1e+02 Score=21.43 Aligned_cols=10 Identities=30% Similarity=0.036 Sum_probs=5.4
Q ss_pred HHHHHHHhCC
Q psy10243 68 RRCLLMTLRQ 77 (201)
Q Consensus 68 ~~~il~~L~~ 77 (201)
.+..+++|+.
T Consensus 16 ~r~tL~~LrL 25 (152)
T TIGR01309 16 IADTLEMLRL 25 (152)
T ss_pred HHHHHHHcCC
Confidence 4455556654
No 427
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=24.51 E-value=2e+02 Score=18.68 Aligned_cols=42 Identities=21% Similarity=0.469 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhhCCC-CCCcccHHHHHHHH
Q psy10243 155 VAELRHVMTNLGEKLTEEEVDAMIAVADQE-GLGYIRYEDFVQVM 198 (201)
Q Consensus 155 ~~el~~~l~~lg~~~s~~ei~~i~~~~d~~-~~g~I~~~eF~~~l 198 (201)
.++|..+| .|.+.+.+.+.+.+..++.. --|.++-+||++++
T Consensus 44 i~~le~~L--~G~~~~~~~i~~~l~~~~~~~~~~~~~~~el~~~l 86 (86)
T PF10437_consen 44 IEELEEAL--IGCPYDREAIKEALNSVDLEDYFGNISVEELIELL 86 (86)
T ss_dssp HHHHHHHH--TTCBSSHHHHHHHHHHCHGGGTCCTHHHHHHHHHH
T ss_pred HHHHHHHH--HhcCCCHHHHHHHHHHhCHhhccccCCHHHHHHhC
Confidence 56666666 47778888888888888543 34578888888764
No 428
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=24.22 E-value=83 Score=24.35 Aligned_cols=61 Identities=7% Similarity=-0.168 Sum_probs=33.4
Q ss_pred cchhHHHHHHHHhHhc-CCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 17 ITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
.++.|++++-+.-+.. |++|+............+....... ....+.+....+.+++..+|
T Consensus 181 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p 242 (256)
T cd05112 181 KSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK--PRLASQSVYELMQHCWKERP 242 (256)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHHcccCh
Confidence 4788999888877776 9998864332211111111001111 12256667777777777765
No 429
>PF09187 DUF1950: Domain of unknown function(DUF1950); InterPro: IPR015270 Members of this family are a set of functionally uncharacterised hypothetical eukaryotic proteins []. ; PDB: 2Q3T_A 1VK5_A 3GAN_A.
Probab=23.90 E-value=37 Score=23.78 Aligned_cols=18 Identities=33% Similarity=0.669 Sum_probs=10.0
Q ss_pred hhhHhhhhhcCCcchhHHH
Q psy10243 5 SVYQIAYMEHLPITQRVTI 23 (201)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (201)
.-|| -||+++||+-.-+.
T Consensus 6 emYQ-~yMk~iPIP~~rgs 23 (119)
T PF09187_consen 6 EMYQ-DYMKQIPIPSSRGS 23 (119)
T ss_dssp HHHH-HHHHTS---SSSSS
T ss_pred HHHH-HHHHcCCCCCCCCC
Confidence 3477 69999998865433
No 430
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=23.58 E-value=25 Score=28.86 Aligned_cols=79 Identities=6% Similarity=-0.185 Sum_probs=49.0
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChh-HHHHHHHHHhccC
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPG-HLRFMCGLVRLDL 95 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~-~~~~~~~~~d~~~ 95 (201)
.++.|++++-+.-|..|.+|+........ .+.+..-.-.-...++.+....+.++|..+|... ..+..+.++ ..|
T Consensus 176 ~~DvwslG~il~el~~G~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i-~~h 251 (325)
T cd05604 176 TVDWWCLGAVLYEMLYGLPPFYCRDVAEM---YDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEI-QEH 251 (325)
T ss_pred cCccccccceehhhhcCCCCCCCCCHHHH---HHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH-hcC
Confidence 47889999999999999999865332111 1111111111123488888999999998876331 122345667 788
Q ss_pred cccc
Q psy10243 96 GFMI 99 (201)
Q Consensus 96 ~~~~ 99 (201)
+|+.
T Consensus 252 ~~f~ 255 (325)
T cd05604 252 PFFE 255 (325)
T ss_pred CCcC
Confidence 9883
No 431
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=23.31 E-value=81 Score=24.26 Aligned_cols=74 Identities=12% Similarity=-0.038 Sum_probs=41.2
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
-++.|++++-+.-+.+|..|+....... ............-....+.+....+.+++..+| +.|..+.++ ..||
T Consensus 181 ~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~~-l~~p 254 (256)
T cd08530 181 KSDIWSLGCLLYEMATFAPPFEARSMQD--LRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKP---KLRPNCDKI-LASP 254 (256)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCc---ccCCCHHHH-hcCC
Confidence 4788999888888889999886433211 011111111111112356677777777777765 445555555 4443
No 432
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=23.05 E-value=81 Score=24.30 Aligned_cols=61 Identities=8% Similarity=-0.125 Sum_probs=35.4
Q ss_pred cchhHHHHHHHHhHhc-CCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 17 ITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
-++.|++++-+.-+.+ |.+|+...............+ .......++.+....+.+++..+|
T Consensus 174 ~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p 235 (250)
T cd05085 174 ESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY--RMSCPQKCPDDVYKVMQRCWDYKP 235 (250)
T ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcccCc
Confidence 3688999887777766 998875432211111111111 111123477888888888888766
No 433
>PF09107 SelB-wing_3: Elongation factor SelB, winged helix ; InterPro: IPR015191 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 3". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; GO: 0003723 RNA binding, 0003746 translation elongation factor activity, 0005525 GTP binding, 0001514 selenocysteine incorporation, 0005737 cytoplasm; PDB: 2PJP_A 2UWM_A 1WSU_B 1LVA_A 2PLY_A.
Probab=22.76 E-value=1.6e+02 Score=17.50 Aligned_cols=31 Identities=32% Similarity=0.552 Sum_probs=24.3
Q ss_pred CCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhCCC
Q psy10243 149 GDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE 184 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~~ 184 (201)
..|.|+..++++.+ | +|-..+-.++..+|..
T Consensus 7 ~~~~itv~~~rd~l---g--~sRK~ai~lLE~lD~~ 37 (50)
T PF09107_consen 7 KNGEITVAEFRDLL---G--LSRKYAIPLLEYLDRE 37 (50)
T ss_dssp TTSSBEHHHHHHHH---T--S-HHHHHHHHHHHHHT
T ss_pred cCCcCcHHHHHHHH---C--ccHHHHHHHHHHHhcc
Confidence 37899999999987 3 6778888888888754
No 434
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=22.55 E-value=87 Score=24.63 Aligned_cols=62 Identities=10% Similarity=-0.079 Sum_probs=35.3
Q ss_pred CcchhHHHHHHHHhHhc-CCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 16 PITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
+.++-|++++-+.-|.. |..|+............. ..........++.+....+.+++..+|
T Consensus 203 ~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p 265 (280)
T cd05049 203 TESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDP 265 (280)
T ss_pred hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence 34788999988888876 998875432211110001 000111113467777788888887765
No 435
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=22.43 E-value=57 Score=26.66 Aligned_cols=77 Identities=8% Similarity=-0.161 Sum_probs=46.3
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCCChhHH--HHHHHHHhcc
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQMPGHL--RFMCGLVRLD 94 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~s~~~~--~~~~~~~d~~ 94 (201)
.++.|++++-++-|.+|.+|+........ ...+..-.-.-....+.+....+.++|..+|.+ .. ...+.++ .+
T Consensus 176 ~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~-R~~~~~~~~~~-~~ 250 (321)
T cd05603 176 TVDWWCLGAVLYEMLYGLPPFYSRDVSQM---YDNILHKPLQLPGGKTVAACDLLVGLLHKDQRR-RLGAKADFLEI-KN 250 (321)
T ss_pred cCcccccchhhhhhhcCCCCCCCCCHHHH---HHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhh-cCCCCCCHHHH-hC
Confidence 57889999999999999999875432111 111111011111347788888888899887633 11 1123455 67
Q ss_pred Cccc
Q psy10243 95 LGFM 98 (201)
Q Consensus 95 ~~~~ 98 (201)
|+|+
T Consensus 251 ~~~~ 254 (321)
T cd05603 251 HVFF 254 (321)
T ss_pred CCCc
Confidence 8877
No 436
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=22.35 E-value=1.1e+02 Score=19.74 Aligned_cols=16 Identities=13% Similarity=0.335 Sum_probs=12.3
Q ss_pred CCcceeHHHHHHHHHH
Q psy10243 149 GDGIINVAELRHVMTN 164 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~ 164 (201)
..|++..+|+..++..
T Consensus 27 ~~Gkv~~ee~n~~~e~ 42 (75)
T TIGR02675 27 ASGKLRGEEINSLLEA 42 (75)
T ss_pred HcCcccHHHHHHHHHH
Confidence 4788888888888754
No 437
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=22.16 E-value=75 Score=16.96 Aligned_cols=13 Identities=23% Similarity=0.496 Sum_probs=6.7
Q ss_pred CCcccHHHHHHHH
Q psy10243 186 LGYIRYEDFVQVM 198 (201)
Q Consensus 186 ~g~I~~~eF~~~l 198 (201)
.|+|++++++.+.
T Consensus 2 ~~~i~~~~~~d~a 14 (33)
T PF09373_consen 2 SGTISKEEYLDMA 14 (33)
T ss_pred CceecHHHHHHHH
Confidence 3455555555543
No 438
>KOG3866|consensus
Probab=21.98 E-value=3.6e+02 Score=22.96 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=20.6
Q ss_pred HHhhhhCcCCCcceeHHHHHHHHHH
Q psy10243 140 EAFRVFDKDGDGIINVAELRHVMTN 164 (201)
Q Consensus 140 ~~F~~~D~~~~G~Is~~el~~~l~~ 164 (201)
.+-+..|.|.+..||.+||-..-..
T Consensus 300 HVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 300 HVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred HHHHhcccchhhhhhHHHHHhhhhh
Confidence 3577889999999999999876544
No 439
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=21.45 E-value=2.1e+02 Score=17.64 Aligned_cols=27 Identities=7% Similarity=0.300 Sum_probs=9.4
Q ss_pred ceeHHHHHHHHHHh-CCCCCHHHHHHHH
Q psy10243 152 IINVAELRHVMTNL-GEKLTEEEVDAMI 178 (201)
Q Consensus 152 ~Is~~el~~~l~~l-g~~~s~~ei~~i~ 178 (201)
.+|.+|...++..+ ...+++.++-.++
T Consensus 14 ~Ls~~e~~~~~~~i~~g~~s~~qiaAfL 41 (66)
T PF02885_consen 14 DLSREEAKAAFDAILDGEVSDAQIAAFL 41 (66)
T ss_dssp ---HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 34444444444443 1234444444333
No 440
>PRK06049 rpl30p 50S ribosomal protein L30P; Reviewed
Probab=21.23 E-value=2.6e+02 Score=20.94 Aligned_cols=10 Identities=30% Similarity=0.055 Sum_probs=5.8
Q ss_pred HHHHHHHhCC
Q psy10243 68 RRCLLMTLRQ 77 (201)
Q Consensus 68 ~~~il~~L~~ 77 (201)
.+..+++||.
T Consensus 18 ~r~tL~~LgL 27 (154)
T PRK06049 18 IADTLKMLRL 27 (154)
T ss_pred HHHHHHHcCC
Confidence 4555666655
No 441
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=21.12 E-value=1.1e+02 Score=25.03 Aligned_cols=79 Identities=10% Similarity=-0.082 Sum_probs=46.5
Q ss_pred cchhHHHHHHHHhHhcCCcceeeeccccccccc--------------------cceeecc--------cCCcCCCCHHHH
Q psy10243 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNR--------------------RVVQSLI--------ASEWYRCSPDTR 68 (201)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------------------~~~f~~~--------~~~~~~is~~~~ 68 (201)
.++.|++++-+.-|.+|.+|+...+........ ..+.... ......++.+..
T Consensus 193 ~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 272 (337)
T cd07852 193 GVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDAL 272 (337)
T ss_pred cchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHH
Confidence 478899999999999999887543321100000 0000000 000112577778
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHhccCcccc
Q psy10243 69 RCLLMTLRQAQMPGHLRFMCGLVRLDLGFMI 99 (201)
Q Consensus 69 ~~il~~L~~~~s~~~~~~~~~~~d~~~~~~~ 99 (201)
+.+.+++..+| +.|..+.++ ..++|+.
T Consensus 273 ~li~~~l~~~P---~~Rps~~~i-l~~~~~~ 299 (337)
T cd07852 273 DLLKKLLVFNP---NKRLTAEEA-LEHPYVA 299 (337)
T ss_pred HHHHHhccCCc---ccccCHHHH-hhChhhh
Confidence 88888888776 556777777 7777764
No 442
>KOG0198|consensus
Probab=21.05 E-value=39 Score=28.45 Aligned_cols=80 Identities=9% Similarity=-0.042 Sum_probs=51.1
Q ss_pred CcchhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCcCC-CCHHHHHHHHHHhCCCCChhHHHHHHHHHhcc
Q psy10243 16 PITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYR-CSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLD 94 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~ 94 (201)
+.++-|+++-.++=|.=|..|.... ........+....-....... +|.++.+++.+++..+| +.|..+.+. ++
T Consensus 201 ~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p---~~Rpta~eL-L~ 275 (313)
T KOG0198|consen 201 RESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDP---EKRPTAEEL-LE 275 (313)
T ss_pred ccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCc---ccCcCHHHH-hh
Confidence 3677788877777776666665432 111111122222222223334 99999999999999988 678888888 89
Q ss_pred Cccccc
Q psy10243 95 LGFMIN 100 (201)
Q Consensus 95 ~~~~~~ 100 (201)
|++...
T Consensus 276 hpf~~~ 281 (313)
T KOG0198|consen 276 HPFLKQ 281 (313)
T ss_pred Chhhhc
Confidence 987743
No 443
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=20.92 E-value=3.2e+02 Score=19.39 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhccCc
Q psy10243 61 YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLG 96 (201)
Q Consensus 61 ~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~~~~ 96 (201)
..++++++.++...+... ..++.+.++++..-|
T Consensus 32 ~~L~~E~~~Fi~~Fi~~r---GnlKe~e~~lgiSYP 64 (113)
T PF09862_consen 32 ARLSPEQLEFIKLFIKNR---GNLKEMEKELGISYP 64 (113)
T ss_pred hcCCHHHHHHHHHHHHhc---CCHHHHHHHHCCCcH
Confidence 459999999999988553 256777777755544
No 444
>PF12486 DUF3702: ImpA domain protein ; InterPro: IPR021069 This entry represents a conserved region located towards the C-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=20.91 E-value=1.3e+02 Score=22.32 Aligned_cols=31 Identities=10% Similarity=0.317 Sum_probs=23.8
Q ss_pred HHHHHHHhhhhCcCCCcceeHHHHHHHHHHh
Q psy10243 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNL 165 (201)
Q Consensus 135 ~~~l~~~F~~~D~~~~G~Is~~el~~~l~~l 165 (201)
...+..-....|.++.||+|..||+.++-.+
T Consensus 68 Lq~L~~rL~~le~~rg~Y~TiSeLKT~vy~i 98 (148)
T PF12486_consen 68 LQQLADRLNQLEEQRGKYMTISELKTAVYQI 98 (148)
T ss_pred HHHHHHHHHHHHHhcCCceeHHHHHHHHHHH
Confidence 4455555667788999999999999987553
No 445
>PF01316 Arg_repressor: Arginine repressor, DNA binding domain; InterPro: IPR020900 The arginine dihydrolase (AD) pathway is found in many prokaryotes and some primitive eukaryotes, an example of the latter being Giardia lamblia (Giardia intestinalis) []. The three-enzyme anaerobic pathway breaks down L-arginine to form 1 mol of ATP, carbon dioxide and ammonia. In simpler bacteria, the first enzyme, arginine deiminase, can account for up to 10% of total cell protein []. Most prokaryotic arginine deiminase pathways are under the control of a repressor gene, termed ArgR []. This is a negative regulator, and will only release the arginine deiminase operon for expression in the presence of arginine []. The crystal structure of apo-ArgR from Bacillus stearothermophilus has been determined to 2.5A by means of X-ray crystallography []. The protein exists as a hexamer of identical subunits, and is shown to have six DNA-binding domains, clustered around a central oligomeric core when bound to arginine. It predominantly interacts with A.T residues in ARG boxes. This hexameric protein binds DNA at its N terminus to repress arginine biosyntheis or activate arginine catabolism. Some species have several ArgR paralogs. In a neighbour-joining tree, some of these paralogous sequences show long branches and differ significantly from the well-conserved C-terminal region. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0006525 arginine metabolic process; PDB: 1AOY_A 3V4G_A 3LAJ_D 3FHZ_A 3LAP_B 3ERE_D 2P5L_C 1F9N_D 2P5K_A 1B4A_A ....
Probab=20.66 E-value=2.1e+02 Score=18.30 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=22.9
Q ss_pred ceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q psy10243 152 IINVAELRHVMTNLGEKLTEEEVDAMIAVAD 182 (201)
Q Consensus 152 ~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d 182 (201)
.-+-+||...|...|+.+++..+..-++++.
T Consensus 19 i~sQ~eL~~~L~~~Gi~vTQaTiSRDLkeL~ 49 (70)
T PF01316_consen 19 ISSQEELVELLEEEGIEVTQATISRDLKELG 49 (70)
T ss_dssp --SHHHHHHHHHHTT-T--HHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcCCCcchhHHHHHHHHcC
Confidence 4478999999999999999999988888764
No 446
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=20.41 E-value=1.2e+02 Score=23.31 Aligned_cols=62 Identities=10% Similarity=-0.091 Sum_probs=35.5
Q ss_pred CcchhHHHHHHHHhHhc-CCcceeeeccccccccccceeecccCCcCCCCHHHHHHHHHHhCCCC
Q psy10243 16 PITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~is~~~~~~il~~L~~~~ 79 (201)
+-++.|++++-+.-+.. |..|+.................. .....++.+..+.+.+++..+|
T Consensus 174 ~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p 236 (251)
T cd05041 174 SESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRM--PAPQLCPEEIYRLMLQCWAYDP 236 (251)
T ss_pred cchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHhccCh
Confidence 34688999888888776 88887654322111111110101 1123367777778888887765
No 447
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=20.39 E-value=66 Score=22.96 Aligned_cols=29 Identities=7% Similarity=0.118 Sum_probs=20.7
Q ss_pred CChhHHHHHHHHHhccCccccccccccccHHHHHHH
Q psy10243 79 QMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMI 114 (201)
Q Consensus 79 ~s~~~~~~~~~~~d~~~~~~~~~~~g~i~f~eF~~~ 114 (201)
+|+++.+.+++++..+. .|.+.|.+|+.-
T Consensus 4 LtDeQFdrLW~e~Pvn~-------~GrLkY~eFL~k 32 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNA-------KGRLKYQEFLSK 32 (118)
T ss_dssp --HHHHHHHHTTS-B-T-------TS-EEHHHHHHH
T ss_pred ccHHHhhhhhhhCcCCc-------cCCEeHHHHHHH
Confidence 47788999999998887 599999999954
No 448
>KOG0201|consensus
Probab=20.34 E-value=1.6e+02 Score=26.07 Aligned_cols=72 Identities=18% Similarity=0.080 Sum_probs=54.0
Q ss_pred chhHHHHHHHHhHhcCCcceeeeccccccccccceeecccCCc----CCCCHHHHHHHHHHhCCCCChhHHHHHHHHHhc
Q psy10243 18 TQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEW----YRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRL 93 (201)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~----~~is~~~~~~il~~L~~~~s~~~~~~~~~~~d~ 93 (201)
-+-|+++|.-+.|.=|=+|... ..+ ++++|..-...- +..|+..++++-.+|..+| +-|..+.++ +
T Consensus 192 ADIWSLGITaiEla~GePP~s~----~hP--mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P---~~RpsA~~L-L 261 (467)
T KOG0201|consen 192 ADIWSLGITAIELAKGEPPHSK----LHP--MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNP---EFRPSAKEL-L 261 (467)
T ss_pred hhhhhhhHHHHHHhcCCCCCcc----cCc--ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCc---ccCcCHHHH-h
Confidence 4679999999999999988663 223 777776655443 2378889999999999988 567777777 7
Q ss_pred cCcccc
Q psy10243 94 DLGFMI 99 (201)
Q Consensus 94 ~~~~~~ 99 (201)
.|..+.
T Consensus 262 Kh~FIk 267 (467)
T KOG0201|consen 262 KHKFIK 267 (467)
T ss_pred hhHHHH
Confidence 775554
No 449
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=20.19 E-value=1e+02 Score=23.94 Aligned_cols=61 Identities=8% Similarity=-0.042 Sum_probs=34.9
Q ss_pred CcchhHHHHHHHHhHhc-CCcceeeeccccccccccceeecccCC-cCCCCHHHHHHHHHHhCCCC
Q psy10243 16 PITQRVTILIEFIFINV-GYLHLTLESEKLDDCNRRVVQSLIASE-WYRCSPDTRRCLLMTLRQAQ 79 (201)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~is~~~~~~il~~L~~~~ 79 (201)
+.++-|++++-+.-+.. |.+|+........ ...+......+ ....+.+....+.+++..+|
T Consensus 182 ~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 244 (260)
T cd05070 182 IKSDVWSFGILLTELVTKGRVPYPGMNNREV---LEQVERGYRMPCPQDCPISLHELMLQCWKKDP 244 (260)
T ss_pred chhhhHHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHHcCCCCCCCCcCCHHHHHHHHHHcccCc
Confidence 35788999988888887 8988864321110 01111101111 12366677777777777765
No 450
>cd01657 Ribosomal_L7_archeal_euk Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The eukaryotic L7 members have an N-terminal extension not found in the archeal L7 orthologs. L7 is closely related to the ribosomal L30 protein found in eukaryotes and prokaryotes.
Probab=20.18 E-value=2.8e+02 Score=20.80 Aligned_cols=14 Identities=29% Similarity=0.453 Sum_probs=8.2
Q ss_pred CcccHHHHHHHHhc
Q psy10243 187 GYIRYEDFVQVMLR 200 (201)
Q Consensus 187 g~I~~~eF~~~l~~ 200 (201)
|-++.+|+++.+.+
T Consensus 94 gi~ciedlv~~i~~ 107 (159)
T cd01657 94 GIICIEDLAHEIYT 107 (159)
T ss_pred CcccHHHHHHHHHh
Confidence 55666666665543
No 451
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=20.10 E-value=1.5e+02 Score=17.13 Aligned_cols=21 Identities=33% Similarity=0.425 Sum_probs=17.4
Q ss_pred eHHHHHHHHHHhCCCCCHHHH
Q psy10243 154 NVAELRHVMTNLGEKLTEEEV 174 (201)
Q Consensus 154 s~~el~~~l~~lg~~~s~~ei 174 (201)
+.+++..+.+..|..+|.+++
T Consensus 28 ~~~e~~~lA~~~Gy~ft~~el 48 (49)
T PF07862_consen 28 NPEEVVALAREAGYDFTEEEL 48 (49)
T ss_pred CHHHHHHHHHHcCCCCCHHHh
Confidence 678888888888998887775
No 452
>PRK00441 argR arginine repressor; Provisional
Probab=20.05 E-value=1.6e+02 Score=21.84 Aligned_cols=40 Identities=20% Similarity=0.188 Sum_probs=32.1
Q ss_pred CCcceeHHHHHHHHHHhCCCCCHHHHHHHHHhhC----CCCCCc
Q psy10243 149 GDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD----QEGLGY 188 (201)
Q Consensus 149 ~~G~Is~~el~~~l~~lg~~~s~~ei~~i~~~~d----~~~~g~ 188 (201)
..|..+.+||.+.|...|..+|+.-+..-++.+. ++++|+
T Consensus 15 ~~~~~~q~eL~~~L~~~G~~vSqaTisRDl~~L~lvKv~~~~G~ 58 (149)
T PRK00441 15 SKEIETQEELAEELKKMGFDVTQATVSRDIKELKLIKVLSNDGK 58 (149)
T ss_pred HcCCCcHHHHHHHHHhcCCCcCHHHHHHHHHHcCcEEeECCCCC
Confidence 3567799999999999999999999988888764 245554
No 453
>PF07128 DUF1380: Protein of unknown function (DUF1380); InterPro: IPR009811 This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be specific to Enterobacteria. The function of this family is unknown.
Probab=20.03 E-value=1.9e+02 Score=21.28 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=21.3
Q ss_pred eeHHHHHHHHHHhCCCCCHHHHHHHHHhhCC
Q psy10243 153 INVAELRHVMTNLGEKLTEEEVDAMIAVADQ 183 (201)
Q Consensus 153 Is~~el~~~l~~lg~~~s~~ei~~i~~~~d~ 183 (201)
.|+++++.+......++|++++..++..++.
T Consensus 27 WT~eDV~~~a~gme~~lTd~E~~aVL~~I~~ 57 (139)
T PF07128_consen 27 WTREDVRALADGMEYNLTDDEARAVLARIGD 57 (139)
T ss_pred ecHHHHHHHHhcCCCCCCHHHHHHHHHHHhc
Confidence 3567777766555566777778777777764
Done!