RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10243
(201 letters)
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 114 bits (289), Expect = 5e-33
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 113 MITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEE 172
L L +Y + +E +EAF+ FD++G G+I+ AE+R+V+ LGE++TE+
Sbjct: 62 AYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITED 121
Query: 173 EVDAMIAVADQE--GLGYIRYEDFVQVMLRG 201
+ + + D G I+YED ++ ++ G
Sbjct: 122 QCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152
Score = 69.9 bits (172), Expect = 1e-15
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 136 EELLEAFRVFD--KDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYED 193
EE+ E F +FD DG ++ A++ ++ LG TE +V + G + E+
Sbjct: 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEE 67
Query: 194 FVQVMLR 200
+ +
Sbjct: 68 ILPIYEE 74
Score = 29.9 bits (68), Expect = 0.30
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLG---EKLTEEEVDAMIAVADQEGLGYIRYE 192
++ + K G+ + E+ + + +E D+EG G I
Sbjct: 47 AQVHQHGGT-KKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSA 105
Query: 193 DFVQVM 198
+ V+
Sbjct: 106 EIRNVL 111
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 113 bits (285), Expect = 2e-32
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 120 LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
L++ N EE ++ F+VFDKD G+I V ELR+V+T+LGEKL+ EE+D ++
Sbjct: 60 LQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Query: 180 VADQEGLGYIRYEDFVQVML 199
+ G + Y DFVQ++L
Sbjct: 120 GVPVKD-GMVNYHDFVQMIL 138
Score = 72.5 bits (179), Expect = 9e-17
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+AF +FD+ G G I + ++ G+ T E+ + + + E F+
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFL 60
Query: 196 QVMLR 200
QV+ R
Sbjct: 61 QVLNR 65
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 113 bits (285), Expect = 2e-32
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 113 MITLSGCLKMYNTEYRVKDVESG---EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL 169
+TL + + D + E+ ++AF+VFDK+ G ++V +LR+++T LGEKL
Sbjct: 57 SLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKL 116
Query: 170 TEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
T+ EVD ++ + + G I Y+ F++ +LR
Sbjct: 117 TDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147
Score = 73.8 bits (182), Expect = 4e-17
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMI-AVADQEGLGYIRYEDF 194
+ F +FDK G G I L + +G T + V +I A + + +
Sbjct: 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQI 63
Query: 195 VQVMLR 200
++
Sbjct: 64 TGLIEV 69
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 112 bits (282), Expect = 4e-32
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++ + + + AF FD++ G I+ LR ++T +G++ T+EEVD M A + G
Sbjct: 68 KLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKG 127
Query: 188 YIRYEDFVQVMLRG 201
Y +F +++ G
Sbjct: 128 NFNYVEFTRILKHG 141
Score = 75.6 bits (187), Expect = 7e-18
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E EAF + D++ DG I+ +L ++ ++G+ T+E ++ M++ E G I + F+
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPINFTMFL 62
Query: 196 QVMLR 200
+
Sbjct: 63 TMFGE 67
Score = 34.0 bits (79), Expect = 0.010
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGE 167
EE+ E +R D G N E ++ + +
Sbjct: 112 EEVDEMYREAPIDKKGNFNYVEFTRILKHGAK 143
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 112 bits (282), Expect = 4e-32
Identities = 45/73 (61%), Positives = 63/73 (86%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++K+ +S EEL+EAF+VFD+DG+G+I+ AELRHVMTNLGEKLT++EVD MI AD +G G
Sbjct: 75 KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG 134
Query: 188 YIRYEDFVQVMLR 200
+I YE+FV++M+
Sbjct: 135 HINYEEFVRMMVS 147
Score = 81.8 bits (203), Expect = 3e-20
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E EAF +FDKDGDG I EL VM +LG+ TE E+ MI D +G G I + +F+
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 196 QVMLR 200
+M R
Sbjct: 70 SLMAR 74
Score = 35.2 bits (82), Expect = 0.004
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT-NLGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
EL + D DG+G I+ E +M + E+ +EEE+ V D++G G I +
Sbjct: 46 AELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAEL 105
Query: 195 VQVM 198
VM
Sbjct: 106 RHVM 109
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 111 bits (280), Expect = 1e-31
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 113 MITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEE 172
IT L M KD + E+ +E RVFDK+G+G + AELRHV+ LGEK+TEE
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 173 EVDAMIAVADQEGLGYIRYEDFVQVML 199
EV+ ++ + + G I YE FV+ ++
Sbjct: 122 EVEELMKGQE-DSNGCINYEAFVKHIM 147
Score = 72.6 bits (179), Expect = 9e-17
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE--GLGYIRYED 193
++ EAF +FD+ GD I +++ + LG+ T E++ ++ +E I +E+
Sbjct: 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEE 67
Query: 194 FVQVMLR 200
F+ ++
Sbjct: 68 FLPMLQA 74
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 111 bits (280), Expect = 1e-31
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+L+AFR DK+G+G I AELR ++ NLG+ LT EV+ ++ G G I YE FV
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFV 135
Query: 196 QVMLRG 201
+++ G
Sbjct: 136 DMLVTG 141
Score = 74.5 bits (184), Expect = 2e-17
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
S +++ E F++FDKD DG +++ EL + +LG+ T E++ + + +
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFD---LA 58
Query: 193 DFVQVMLR 200
F V +
Sbjct: 59 TFKTVYRK 66
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 111 bits (281), Expect = 1e-31
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++K + + ++ AF+V D DG G I + L ++T G + T EE+ M A + G
Sbjct: 87 KLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAG 146
Query: 188 YIRYEDFVQVMLRG 201
+ Y++ V+ G
Sbjct: 147 NVDYKNICYVITHG 160
Score = 71.5 bits (176), Expect = 4e-16
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL-TEEEVDAMIAVADQEGLGYIRYEDF 194
E+ EAF V D++ DGII+ +LR +G EE+DAMI E G I + F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPINFTVF 80
Query: 195 VQVMLR 200
+ +
Sbjct: 81 LTMFGE 86
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 108 bits (273), Expect = 2e-31
Identities = 47/73 (64%), Positives = 57/73 (78%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
+KD +S EE+ EAFRV DKDG+G I+ AELRHVMTNLGEKLT+EEVD MI AD +G G
Sbjct: 21 LMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 80
Query: 188 YIRYEDFVQVMLR 200
+ YE+FVQ+M
Sbjct: 81 QVNYEEFVQMMTA 93
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 110 bits (278), Expect = 2e-31
Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVAD--QEGLG 187
+ + + +EAF+ FD++G G I+ AELRHV+T LGE+L++E+VD +I + D ++ G
Sbjct: 78 CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEG 137
Query: 188 YIRYEDFVQVMLRG 201
++YEDFV+ ++ G
Sbjct: 138 NVKYEDFVKKVMAG 151
Score = 69.5 bits (171), Expect = 2e-15
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 136 EELLEAFRVFD--KDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYED 193
++L + F +FD DG ++ +L V LG E+V + + G + +E+
Sbjct: 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEE 67
Query: 194 FVQVMLR 200
F+
Sbjct: 68 FLPAYEG 74
Score = 30.6 bits (70), Expect = 0.17
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN--LGEKLTEEEVDAMIAVADQEGLGYIRYED 193
E++ K G+ + E E+ T + D+EG G+I +
Sbjct: 47 EDVFAVGGT-HKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 105
Query: 194 FVQVM 198
V+
Sbjct: 106 LRHVL 110
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 111 bits (279), Expect = 3e-31
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++KD +S EE+ EAFRVFDKDG+G I+ AELRHVMTNLGEKLT+EEVD MI AD +G G
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 188 YIRYEDFVQVMLRG 201
+ YE+FVQ+M
Sbjct: 136 QVNYEEFVQMMTAK 149
Score = 82.6 bits (205), Expect = 3e-20
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E EAF +FDKDGDG I EL VM +LG+ TE E+ MI D +G G I + +F+
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 196 QVMLR 200
+M R
Sbjct: 71 TMMAR 75
Score = 40.2 bits (95), Expect = 1e-04
Identities = 3/20 (15%), Positives = 5/20 (25%)
Query: 136 EELLEAFRVFDKDGDGIINV 155
E + R K +
Sbjct: 160 EVIRNKIRAIGKMARVFSVL 179
Score = 36.0 bits (84), Expect = 0.004
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
EL + D DG+G I+ E +M + + +EEE+ V D++G GYI +
Sbjct: 47 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
Query: 195 VQVM 198
VM
Sbjct: 107 RHVM 110
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 110 bits (278), Expect = 3e-31
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++ + +S EE+L+AFR+FD D G I + +LR V LGE LTEEE+ MIA AD+
Sbjct: 93 KMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 152
Query: 188 YIRYEDFVQVMLRG 201
I ++F+++M +
Sbjct: 153 EIDEDEFIRIMKKT 166
Score = 82.6 bits (205), Expect = 2e-20
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+ EAF +FD DG G I+ EL+ M LG + +EE+ MI+ D++G G I +E+F+
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 196 QVMLR 200
+M
Sbjct: 88 TMMTA 92
Score = 36.4 bits (85), Expect = 0.002
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
EE+ + DKDG G I+ E +MT +GE+ + EE+ + D + G I +D
Sbjct: 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDL 123
Query: 195 VQVM 198
+V
Sbjct: 124 RRVA 127
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 116 bits (293), Expect = 3e-31
Identities = 48/73 (65%), Positives = 59/73 (80%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++KD +S EE+ EAFRVFDKDG+G I+ AELRHVMTNLGEKLT+EEVD MI AD +G G
Sbjct: 377 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 436
Query: 188 YIRYEDFVQVMLR 200
+ YE+FVQ+M
Sbjct: 437 QVNYEEFVQMMTA 449
Score = 83.0 bits (205), Expect = 6e-19
Identities = 32/80 (40%), Positives = 42/80 (52%)
Query: 121 KMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV 180
K+ E E EAF +FDKDGDG I EL VM +LG+ TE E+ MI
Sbjct: 297 KLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE 356
Query: 181 ADQEGLGYIRYEDFVQVMLR 200
D +G G I + +F+ +M R
Sbjct: 357 VDADGNGTIDFPEFLTMMAR 376
Score = 49.9 bits (119), Expect = 1e-07
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 119 CLKMYNTEYRVKDV---ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVD 175
C Y + D E ++ +F KD AE++ L ++ + +D
Sbjct: 227 CFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGID 286
Score = 39.9 bits (93), Expect = 3e-04
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEV-DAMIAVADQEGLGYIRYED 193
EL + D DG+G I+ E +M + + +EEE+ +A V D++G GYI +
Sbjct: 348 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF-RVFDKDGNGYISAAE 406
Query: 194 FVQVM 198
VM
Sbjct: 407 LRHVM 411
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 109 bits (276), Expect = 4e-31
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++ + ++ EE+L+AF++FD D G I+ L+ V LGE LT+EE+ MI AD++G G
Sbjct: 71 KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDG 130
Query: 188 YIRYEDFVQVMLR 200
+ ++F+++M +
Sbjct: 131 EVSEQEFLRIMKK 143
Score = 82.9 bits (206), Expect = 8e-21
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+ EAF +FD DG G I+V EL+ M LG + +EE+ MI+ D+EG G + + DF+
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 196 QVMLR 200
VM +
Sbjct: 66 TVMTQ 70
Score = 37.1 bits (87), Expect = 0.001
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYE 192
EE+ + DK+G G +N + VMT + EK T+EE+ + D + G I ++
Sbjct: 40 KKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFK 99
Query: 193 DFVQVM 198
+ +V
Sbjct: 100 NLKRVA 105
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 107 bits (270), Expect = 5e-31
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR 190
D ++ EEL EAF+VFDKD +G I+ +ELRHVM NLGEKLT+EEV+ MI AD +G G +
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 191 YEDFVQVMLR 200
YE+FV++M+
Sbjct: 64 YEEFVKMMMT 73
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 108 bits (273), Expect = 1e-30
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++ + +E+ AF++FD D G I++ LR V LGE LT+EE+ AMI D +G G
Sbjct: 88 KILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDG 147
Query: 188 YIRYEDFVQVM 198
I +F+ +
Sbjct: 148 EINENEFIAIC 158
Score = 81.4 bits (202), Expect = 5e-20
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+ EAF +FD + DG ++ EL+ M LG +L + E+ +I D EG ++Y+DF
Sbjct: 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 196 QVMLR 200
VM
Sbjct: 83 IVMGE 87
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
E+L+ +D +G ++ + VM + ++ +E+ + D + G I ++
Sbjct: 59 REILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNL 118
Query: 195 VQVM 198
+V
Sbjct: 119 RRVA 122
Score = 32.5 bits (75), Expect = 0.047
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ EEL FD DGDG IN E + T+
Sbjct: 130 TDEELRAMIEEFDLDGDGEINENEFIAICTD 160
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 107 bits (270), Expect = 2e-30
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 114 ITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEE 173
+T L+ + V D ++ EEL++ F FD + G + +++++++T G+ LT++E
Sbjct: 64 LTYEQYLEYLSI--CVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
Query: 174 VDAMIAVADQEGLGYIRYEDFVQVMLR 200
+ E I Y+ F + +L+
Sbjct: 122 AIDALNAFSSEDN--IDYKLFCEDILQ 146
Score = 68.4 bits (168), Expect = 3e-15
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E +K G I++ + LG + + + + + YE ++
Sbjct: 15 DESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG----DNLTYEQYL 70
Query: 196 QVMLR 200
+ +
Sbjct: 71 EYLSI 75
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 108 bits (273), Expect = 3e-30
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
R+ + + ++ AF +FD +GDG L+ +T GEK +++EVD ++ A +G G
Sbjct: 118 RIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNG 176
Query: 188 YIRYEDFVQVMLRG 201
I + F Q++ +G
Sbjct: 177 LIDIKKFAQILTKG 190
Score = 78.5 bits (194), Expect = 2e-18
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E EAF++ D+D DG I+ ++R +LG TE+E+D+M+ E G I + F+
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPINFTMFL 112
Query: 196 QVMLR 200
+
Sbjct: 113 TIFGD 117
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 107 bits (270), Expect = 4e-30
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++ +S E + AF +FD+ +N+ ++ ++ N+G+ ++E+ A EG G
Sbjct: 79 KLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-G 137
Query: 188 YIRYEDFVQVMLRG 201
Y F ++
Sbjct: 138 KFDYVKFTAMIKGS 151
Score = 75.6 bits (187), Expect = 7e-18
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+ EAF + D D DG ++ +++ + LG ++E+ AM+ +E G + + F+
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFL 73
Query: 196 QVMLR 200
+
Sbjct: 74 SIFSD 78
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 107 bits (270), Expect = 4e-30
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 120 LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
L M + + + E+ LE FRVFDK+G+G + AELRHV+T LGEK+TEEEV+ ++A
Sbjct: 71 LPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA 130
Query: 180 VADQEGLGYIRYEDFVQVML 199
++ G I YE F++ +L
Sbjct: 131 -GHEDSNGCINYEAFLKHIL 149
Score = 72.6 bits (179), Expect = 8e-17
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV--ADQEGLGYIRYED 193
EE EAF +FD+ GDG I ++ VM LG+ T EV ++ +D+ + +E
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 69
Query: 194 FVQVM 198
F+ ++
Sbjct: 70 FLPML 74
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 107 bits (269), Expect = 4e-30
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
+V + + L AF +FD+DG G I L+ ++ N+G+ ++EE+ + A +
Sbjct: 77 KVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKN-K 135
Query: 188 YIRYEDFVQVMLRG 201
Y V + +
Sbjct: 136 QFNYNKMVDIKGKA 149
Score = 74.1 bits (183), Expect = 3e-17
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+EL EAF + D+D DG I + +L+ + ++LG ++E++AM+ G + + F+
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP----GQLNFTAFL 71
Query: 196 QVMLR 200
+
Sbjct: 72 TLFGE 76
Score = 26.7 bits (60), Expect = 3.5
Identities = 3/33 (9%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEK 168
EE+ ++ + N ++ + ++
Sbjct: 121 EEIKNVWKDAPLK-NKQFNYNKMVDIKGKAEDE 152
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 107 bits (269), Expect = 6e-30
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
V + +EL EAFR++DK+G+G I+ +R ++ L E L+ E++DAMI D +G G
Sbjct: 83 EVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSG 142
Query: 188 YIRYEDFVQVMLRG 201
+ +E+F+ VM G
Sbjct: 143 TVDFEEFMGVMTGG 156
Score = 77.6 bits (192), Expect = 2e-18
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 136 EELLEAFRVFDK-DGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
+ L AFR F+ +G G ++ ++ ++ LG + T+ + +I D G G I ++ F
Sbjct: 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSF 72
Query: 195 VQVMLR 200
+ R
Sbjct: 73 KIIGAR 78
Score = 34.5 bits (80), Expect = 0.009
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVA----DQEGLGY 188
+ + + FD G+G I+ + + LGE++ E++ + A D+EG GY
Sbjct: 48 TKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGY 107
Query: 189 IRYEDFVQVM 198
I + +++
Sbjct: 108 ISTDVMREIL 117
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 106 bits (268), Expect = 6e-30
Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
++K +S +ELLEAF+VFDK+GDG+I+ AEL+HV+T++GEKLT+ EVD M+ +G G
Sbjct: 76 QLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSG 134
Query: 188 YIRYEDFVQVMLR 200
I + F ++ +
Sbjct: 135 EINIKQFAALLSK 147
Score = 81.7 bits (203), Expect = 3e-20
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E EAF +FDKD G I+ +EL VM +LG +E EV ++ D +G I + +F+
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFL 70
Query: 196 QVMLR 200
+M R
Sbjct: 71 ALMSR 75
Score = 35.1 bits (82), Expect = 0.004
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
E+ + D DG+ I +E +M+ L +E+E+ V D+ G G I +
Sbjct: 47 AEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAEL 106
Query: 195 VQVM 198
V+
Sbjct: 107 KHVL 110
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 103 bits (259), Expect = 2e-29
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
E+L AFR FD+DGDG I V ELR M LG+ L +EE+DAMI AD + G + YE
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 193 DFVQVMLR 200
+F +++ +
Sbjct: 63 EFARMLAQ 70
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 105 bits (265), Expect = 2e-29
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYI 189
+S EEL FR+FDK+ DG I++ EL ++ GE +TEE+++ ++ +D+ G I
Sbjct: 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 149
Query: 190 RYEDFVQVM 198
+++F+++M
Sbjct: 150 DFDEFLKMM 158
Score = 83.0 bits (206), Expect = 2e-20
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E AF +FD DG G I+ EL VM LG+ T+EE+DA+I D++G G I +E+F+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 196 QVMLR 200
+M+R
Sbjct: 80 VMMVR 84
Score = 32.2 bits (74), Expect = 0.062
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL----GEKLTEEEVDAMIAVADQEGLGYI 189
+ EEL D+DG G I+ E +M + +EEE+ + D+ G+I
Sbjct: 54 TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 113
Query: 190 RYEDFVQVM 198
E+ +++
Sbjct: 114 DIEELGEIL 122
Score = 29.9 bits (68), Expect = 0.31
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ E++ + + DK+ DG I+ E +M
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 105 bits (264), Expect = 4e-29
Identities = 24/66 (36%), Positives = 45/66 (68%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
+S EEL + FR+FDK+ DG I++ EL+ ++ GE +TE++++ ++ D+ G I Y+
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 193 DFVQVM 198
+F++ M
Sbjct: 152 EFLEFM 157
Score = 77.6 bits (192), Expect = 1e-18
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 136 EELLEAFRVFDKDG-DGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
E AF +F DG I+ EL VM LG+ T EE+ MI D++G G + +++F
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 195 VQVMLR 200
+ +M+R
Sbjct: 78 LVMMVR 83
Score = 32.5 bits (75), Expect = 0.039
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL----GEKLTEEEVDAMIAVADQEGLGYI 189
+ EEL E D+DG G ++ E +M + +EEE+ + + D+ GYI
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYI 112
Query: 190 RYEDFVQVM 198
E+ ++
Sbjct: 113 DLEELKIML 121
Score = 30.2 bits (69), Expect = 0.22
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ +++ E + DK+ DG I+ E M +
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 103 bits (260), Expect = 8e-29
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
R+K S + L +AFR FD +G G I A L+ + NLG++L E + + + E G
Sbjct: 71 RMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETEK-G 129
Query: 188 YIRYEDFVQVM 198
IRY++F+ M
Sbjct: 130 QIRYDNFINTM 140
Score = 81.4 bits (202), Expect = 3e-20
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E EAF +FD + G I L+ V+ G ++ + M AD G G I++ +F+
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFL 65
Query: 196 QVMLR 200
+M R
Sbjct: 66 SMMGR 70
Score = 36.3 bits (85), Expect = 0.002
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
E F D G+G I E +M + + +E+ + D EG GYI
Sbjct: 42 AAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAAL 101
Query: 195 VQVM 198
+
Sbjct: 102 QDAL 105
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 104 bits (262), Expect = 1e-28
Identities = 19/93 (20%), Positives = 33/93 (35%)
Query: 108 FVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGE 167
F F+ R + E F +FDKDG G I + E + G
Sbjct: 85 FPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGI 144
Query: 168 KLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
++E+ +A D + G + ++ + L
Sbjct: 145 SPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177
Score = 68.2 bits (167), Expect = 1e-14
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 10/75 (13%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRH-----VMTNLGEKLTEEEVDAMIAVADQEGLG--- 187
+ F D +G+G I + E+ + L + + + A G G
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 188 --YIRYEDFVQVMLR 200
I + F+ +
Sbjct: 80 GKEIAFPQFLDGWKQ 94
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 101 bits (255), Expect = 6e-28
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGL 186
D+ +EL +AFR FD +GDG I+ +ELR M LG ++ +++ +I D G
Sbjct: 80 ETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGD 139
Query: 187 GYIRYEDFVQVMLR 200
G + +E+FV++M R
Sbjct: 140 GRVDFEEFVRMMSR 153
Score = 81.8 bits (203), Expect = 4e-20
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
EEL EAFR FDKD DG IN +L + M +G TE E+ + + G++ ++DFV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 196 QVMLR 200
++M
Sbjct: 71 ELMGP 75
Score = 32.5 bits (75), Expect = 0.045
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL-----GEKLTEEEVDAMIAVADQEGLGY 188
+ EL+E + + + G ++ + +M + + +E+ D G G
Sbjct: 45 TEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGE 104
Query: 189 IRYEDFVQVM 198
I + + M
Sbjct: 105 ISTSELREAM 114
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 98.4 bits (246), Expect = 2e-27
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEK-LTEEEVDAMIAVADQEGLGYIRY 191
+ EE+L AF+VFD +GDG+I+ E + +M +GE+ LT+ EV+ + AD++G G I
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 192 EDFVQVMLRG 201
+F+ ++ +
Sbjct: 65 PEFMDLIKKS 74
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 98.8 bits (247), Expect = 3e-26
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
+ +E E L+ AF FDKDG G I + E++ + G L + +D MI DQ+ G
Sbjct: 74 HLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDG 131
Query: 188 YIRYEDFVQVMLRG 201
I Y +F +M +
Sbjct: 132 QIDYGEFAAMMRKR 145
Score = 86.1 bits (214), Expect = 2e-21
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L E F++ D D G I EL+ + +G +L E E+ ++ AD + G I Y +F+
Sbjct: 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 69
Query: 196 QVMLR 200
+
Sbjct: 70 AATVH 74
Score = 43.0 bits (102), Expect = 1e-05
Identities = 6/44 (13%), Positives = 14/44 (31%)
Query: 121 KMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ N + + L +A + D + +I H +
Sbjct: 145 RKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFKHHHHHH 188
Score = 38.4 bits (90), Expect = 5e-04
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E+ + D D G I+ E +L + EE + + + D++G GYI ++
Sbjct: 46 SEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQ 105
Query: 196 QVM 198
Q
Sbjct: 106 QAC 108
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 94.9 bits (237), Expect = 3e-26
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196
F FDK+ DG +++ E R V T+E++ D +G G + ++F
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 197 VMLR 200
+ +
Sbjct: 62 CIEK 65
Score = 32.5 bits (75), Expect = 0.012
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ E++++ F D DG+G +N E + +
Sbjct: 35 TQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 95.9 bits (239), Expect = 9e-26
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-EKLTEEEVDAMIAVADQEGL 186
++ E EL + F + +I LR LG E +++E+ M+ D +G
Sbjct: 32 KMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGD 91
Query: 187 GYIRYEDFVQVMLR 200
G + +F +M+R
Sbjct: 92 GALNQTEFCVLMVR 105
Score = 37.3 bits (87), Expect = 7e-04
Identities = 5/64 (7%), Positives = 13/64 (20%), Gaps = 1/64 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN-LGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
++ VM + + E+ ++ I E
Sbjct: 3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESL 62
Query: 195 VQVM 198
+
Sbjct: 63 RRNS 66
Score = 33.9 bits (78), Expect = 0.010
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQE 184
S E+ R D DGDG +N E +M L ++ E+ + QE
Sbjct: 75 SKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125
Score = 33.5 bits (77), Expect = 0.016
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 171 EEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
E +M+ +YED + VM
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDMLPVMAE 31
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 96.4 bits (241), Expect = 1e-25
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
+ +E + L AF FDKDG G I EL+ G + + ++ ++ DQ+ G
Sbjct: 91 HLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDG 148
Query: 188 YIRYEDFVQVMLRG 201
I Y +FV +M +G
Sbjct: 149 RIDYNEFVAMMQKG 162
Score = 83.3 bits (207), Expect = 1e-20
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L E F + D D G I EL+ + +G L E E+ ++ AD + G I Y++F+
Sbjct: 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFI 86
Query: 196 QVMLR 200
L
Sbjct: 87 AATLH 91
Score = 37.1 bits (87), Expect = 0.001
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E+L+ + D D G I+ E +L + E+ + A D++G GYI ++
Sbjct: 63 SEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQ 122
Query: 196 QVM 198
Q
Sbjct: 123 QAC 125
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 94.6 bits (236), Expect = 1e-25
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYIRYE 192
++ E F + DKD G I EL+ V+ G L + E A++A D + G I +
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 193 DFVQVMLRG 201
+F +++ +
Sbjct: 101 EFAKMVAQA 109
Score = 31.0 bits (71), Expect = 0.082
Identities = 5/36 (13%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
+ + L ++++ I+ G Y+ F ++
Sbjct: 2 MTKVLKADDINKAISAFKDP--GTFDYKRFFHLVGL 35
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 93.4 bits (233), Expect = 2e-25
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E AF +FD DG G I+ EL VM LG+ T+EE+DA+I D++G G I +E+F+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 196 QVMLR 200
+M+R
Sbjct: 80 VMMVR 84
Score = 28.0 bits (63), Expect = 0.72
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEE 172
+ EEL D+DG G I+ E +M ++ E+
Sbjct: 54 TKEELDAIIEEVDEDGSGTIDFEEFLVMMV---RQMKED 89
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 92.2 bits (230), Expect = 4e-25
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+++ F+ FD +GDG I+++EL + LG + +EV M+A D +G G+I + +F+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 196 QVM 198
Sbjct: 62 SFC 64
Score = 30.2 bits (69), Expect = 0.10
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEV 174
S +E+ D DGDG I+ E ++V
Sbjct: 36 SADEVQRMMAEIDTDGDGFIDFNEFISFCN--ANPGLMKDV 74
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 93.0 bits (232), Expect = 4e-25
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
S ++ + F+ D D G I EL+ V+ + G LT+ E A + AD++G G I
Sbjct: 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKI 98
Query: 190 RYEDFVQVMLRG 201
++F ++
Sbjct: 99 GIDEFETLVHEA 110
Score = 32.5 bits (75), Expect = 0.024
Identities = 10/68 (14%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR 190
D+ +++ +A +G N + ++ + ++ +V + D + G+I
Sbjct: 5 DLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIE 60
Query: 191 YEDFVQVM 198
E+ V+
Sbjct: 61 EEELKFVL 68
Score = 31.4 bits (72), Expect = 0.064
Identities = 4/36 (11%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
+ L +++ + E G ++ F ++
Sbjct: 3 AKDLLKADDIKKALDAVKAE--GSFNHKKFFALVGL 36
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 95.3 bits (237), Expect = 7e-25
Identities = 13/96 (13%), Positives = 30/96 (31%)
Query: 105 SLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ ++ + + F + DKD +G I + E +
Sbjct: 78 ETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA 137
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
G + E+ + V D + G + ++ + L
Sbjct: 138 AGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173
Score = 66.0 bits (161), Expect = 7e-14
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 10/75 (13%)
Query: 136 EELLEAFRVFDKDGDGIINVAEL-----RHVMTNLGEKLTEEEVDAMIAVADQEGLGY-- 188
F D + +G I++ E+ V+ NLG + + A G G
Sbjct: 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKY 75
Query: 189 ---IRYEDFVQVMLR 200
+ +++ +
Sbjct: 76 GVETDWPAYIEGWKK 90
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 91.5 bits (228), Expect = 8e-25
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL------TEEEVDAMIAVADQEGLGYI 189
EL AF+ D +GDG + EL+ M L +E +I +AD+ G I
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 190 RYEDFVQVM 198
E+F+
Sbjct: 67 SKEEFLNAN 75
Score = 31.4 bits (72), Expect = 0.033
Identities = 8/46 (17%), Positives = 18/46 (39%)
Query: 120 LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ + + + E + ++ DK+ DG I+ E + L
Sbjct: 33 MVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 91.5 bits (228), Expect = 2e-24
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
+S +++ +AF V D+D G I EL+ + N LT+ E A +A D++G G I
Sbjct: 38 KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMI 97
Query: 190 RYEDFVQVM 198
++F ++
Sbjct: 98 GVDEFAAMI 106
Score = 29.1 bits (66), Expect = 0.35
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 169 LTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
L + +V A +A ++++F +
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGL 35
Score = 27.9 bits (63), Expect = 0.97
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT 163
E DKDGDG+I V E ++
Sbjct: 80 AETKAFLADGDKDGDGMIGVDEFAAMIK 107
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 91.1 bits (227), Expect = 5e-24
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 120 LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
K Y + + L +++ D DGDG + E+ G E+V +
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVM 114
Query: 180 VADQEGLGYIRYEDFVQVML 199
AD G GYI E+F++ L
Sbjct: 115 KADANGDGYITLEEFLEFSL 134
Score = 79.5 bits (197), Expect = 2e-19
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVML 199
F+ D +GDG ++ E++ ++ E+ + + D +G G I +F +
Sbjct: 4 ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 200 R 200
Sbjct: 64 S 64
Score = 34.4 bits (80), Expect = 0.007
Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEEVDAMIA--VADQEGLGYIR 190
+ + L F+ D DG+G I+ E ++ G+ L+++++ + + D +G G +
Sbjct: 34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLT 93
Query: 191 YEDFVQVM 198
E+
Sbjct: 94 KEEVTSFF 101
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 92.7 bits (231), Expect = 6e-24
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM--TNLGEKLTEEEVDAMIAVADQEG 185
+ E L F+ FD DG+G I+V EL+ + ++ L ++ +D+++ D G
Sbjct: 121 DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNG 180
Query: 186 LGYIRYEDFVQVMLR 200
G I + +F+ +M +
Sbjct: 181 DGEIDFHEFMLMMSK 195
Score = 85.3 bits (212), Expect = 4e-21
Identities = 13/65 (20%), Positives = 25/65 (38%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L F D D G ++ E+ + +G + ++ ++ D G I Y DF+
Sbjct: 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFL 116
Query: 196 QVMLR 200
+
Sbjct: 117 AATID 121
Score = 36.4 bits (85), Expect = 0.003
Identities = 11/63 (17%), Positives = 23/63 (36%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
++ + R D + G I+ + + L +E D +G G I E+
Sbjct: 93 PDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELK 152
Query: 196 QVM 198
++
Sbjct: 153 RIF 155
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 89.1 bits (222), Expect = 6e-24
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E+ EAF +FD + G I+ EL+ M LG + + E+ ++ D+EG GYI ++DF+
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFL 66
Query: 196 QVMLR 200
+M
Sbjct: 67 DIMTE 71
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 93.8 bits (233), Expect = 9e-24
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 126 EYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT--------EEEVDAM 177
+R + ++S EE ++ +R +D D G I EL++ + +L EK E D M
Sbjct: 93 LFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLM 152
Query: 178 IAVADQEGLGYIRYEDFVQVMLR 200
+ + D G + + +++
Sbjct: 153 LKLFDSNNDGKLELTEMARLLPV 175
Score = 82.2 bits (203), Expect = 2e-19
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 121 KMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMI-- 178
+ G+E +AF ++D+DG+G I+ EL ++ +L EK +E I
Sbjct: 176 QENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNIST 235
Query: 179 ---AVADQEGLGYIRYEDFVQVMLRG 201
+ G + D ++ G
Sbjct: 236 YKKNIMALSDGGKLYRTDLALILSAG 261
Score = 74.5 bits (183), Expect = 2e-16
Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE------EEVDAMIAVADQEGL 186
+ + E + FD DG G + EL++++ L + + E+ + Q
Sbjct: 13 ITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDD 72
Query: 187 GYIRYEDFVQVMLR 200
G I + V+
Sbjct: 73 GKIGIVELAHVLPT 86
Score = 48.3 bits (115), Expect = 3e-07
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 124 NTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN--------LGEKLTEEEVD 175
V D + E ++FD + DG + + E+ ++ G K+ +E +
Sbjct: 135 KANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFN 194
Query: 176 AMIAVADQEGLGYIRYEDFVQVM 198
+ DQ+G GYI + ++
Sbjct: 195 KAFELYDQDGNGYIDENELDALL 217
Score = 39.5 bits (92), Expect = 3e-04
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN---------LG 166
L ++ + +E E+ + + DG I + EL HV+
Sbjct: 38 LQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQ 97
Query: 167 EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ + EE D + G+I E+ +
Sbjct: 98 QLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 89.7 bits (223), Expect = 1e-23
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E E + FD +G+G I++ L+ ++ LG T E+ +I Y DF+
Sbjct: 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 91
Query: 196 QVMLRG 201
++ML
Sbjct: 92 RMMLGK 97
Score = 25.4 bits (56), Expect = 8.0
Identities = 3/30 (10%), Positives = 8/30 (26%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMT 163
+ EL + + + +M
Sbjct: 66 THLELKKLIGEVSSGSGETFSYPDFLRMML 95
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 88.1 bits (219), Expect = 4e-23
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
S ++ + FR D D G ++ EL++ + +LTE E +++ AD +G G I
Sbjct: 38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
Query: 190 RYEDFVQVM 198
++F +++
Sbjct: 98 GADEFQEMV 106
Score = 26.9 bits (60), Expect = 2.3
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT 163
E D DGDG I E + ++
Sbjct: 80 SETKSLMDAADNDGDGKIGADEFQEMVH 107
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 90.4 bits (225), Expect = 4e-23
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ E FR D GDG ++ E+R + + G +++E+ A++ D++ G + ++D+V
Sbjct: 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYV 152
Query: 196 QVMLR 200
++ +
Sbjct: 153 ELSIF 157
Score = 78.5 bits (194), Expect = 1e-18
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
+EL+E FR D DG G I+V EL +++ G + + ++ + D+ G I ++
Sbjct: 24 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 193 DFVQVMLR 200
+F +
Sbjct: 84 EFKDLHHF 91
Score = 40.7 bits (96), Expect = 9e-05
Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR--Y 191
S + R FD+ G + + + + ++ + A D+E G + +
Sbjct: 127 SEQTFQALMRKFDRQRRGSLGFDDYVELSIFV-CRVRN-----VFAFYDRERTGQVTFTF 180
Query: 192 EDFVQVML 199
+ F+ +
Sbjct: 181 DTFIGGSV 188
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 87.2 bits (217), Expect = 5e-23
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L E F++ D D G I EL+ + +G +L E E+ ++ AD + G I Y +F+
Sbjct: 23 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI 82
Query: 196 QVML 199
+
Sbjct: 83 AATV 86
Score = 25.2 bits (56), Expect = 6.2
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
E+ + D D G I+ E +
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFIAATVH 87
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 87.1 bits (216), Expect = 8e-23
Identities = 14/66 (21%), Positives = 25/66 (37%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
+ + F FD I+ E R + + LT+E+ D + G ++Y
Sbjct: 21 SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYP 80
Query: 193 DFVQVM 198
DF+
Sbjct: 81 DFLSRF 86
Score = 25.9 bits (57), Expect = 4.1
Identities = 4/44 (9%), Positives = 13/44 (29%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
E+ + + G + + ++ D+ +A
Sbjct: 60 EQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATPMATGDSAVA 103
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 86.9 bits (216), Expect = 9e-23
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
+S +L E FR+ D D G I EL++ + LT E +A AD +G G I
Sbjct: 38 KSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKI 97
Query: 190 RYEDFVQVM 198
E+F +++
Sbjct: 98 GAEEFQEMV 106
Score = 30.3 bits (69), Expect = 0.12
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ E D DGDG I E + ++ +
Sbjct: 78 TASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
Score = 26.9 bits (60), Expect = 2.1
Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
L + L+ ++ A + D + + F Q+
Sbjct: 2 LTDILSPSDIAAAL--RDCQAPDSFSPKKFFQIS 33
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 86.5 bits (215), Expect = 9e-23
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+E EAF++FDKD D + EL VM LG T++++ ++ D++ G E F+
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 196 QVMLR 200
+ML
Sbjct: 74 TIMLE 78
Score = 25.3 bits (56), Expect = 6.2
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMT 163
+ +++ E + +DKD G + +M
Sbjct: 48 TKQKISEIVKDYDKDNSGKFDQETFLTIML 77
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 86.2 bits (214), Expect = 1e-22
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
+ + F+ FD +GDG I+ +EL + LG +T +EV M+A D +G G+I ++
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFD 66
Query: 193 DFVQVMLRG 201
+F
Sbjct: 67 EFTDFARAN 75
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 89.3 bits (222), Expect = 1e-22
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
+ + S E LL AF+ FD DG G I EL + ++ +E ++ D+ G
Sbjct: 115 DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV--TEVDDETWHQVLQECDKNNDG 172
Query: 188 YIRYEDFVQVMLRG 201
+ +E+FV++M +
Sbjct: 173 EVDFEEFVEMMQKI 186
Score = 74.6 bits (184), Expect = 5e-17
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 136 EELLEAFRVFDKDGDGIINVAELR-----------HVMTNLGEKLTEEEVDAMIAVADQE 184
+EL + FR D +GDG ++ EL +++L E EVD ++ D +
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 185 GLGYIRYEDFVQVMLR 200
GYI Y +FV V +
Sbjct: 100 RNGYIEYSEFVTVCMD 115
Score = 38.4 bits (90), Expect = 4e-04
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E+ + D D +G I +E V + L+ E + A D +G G I E+
Sbjct: 87 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 146
Query: 196 QVM 198
++
Sbjct: 147 RLF 149
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 86.6 bits (215), Expect = 1e-22
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
+S +++ + F + DKD G I EL ++ L+ +E ++A D++G G I
Sbjct: 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 97
Query: 190 RYEDFVQVM 198
E+F ++
Sbjct: 98 GVEEFSTLV 106
Score = 28.8 bits (65), Expect = 0.54
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT 163
+E DKDGDG I V E ++
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 87.6 bits (217), Expect = 2e-22
Identities = 21/69 (30%), Positives = 31/69 (44%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
E E + FD + +G I++ L+ +M LG T E+ MI+ I Y
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 193 DFVQVMLRG 201
DFV +ML
Sbjct: 107 DFVNMMLGK 115
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 87.3 bits (216), Expect = 2e-22
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E + FD +G+G I++ L+ ++ LG T E+ +I Y DF+
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 196 QVMLRG 201
++ML
Sbjct: 108 RMMLGK 113
Score = 28.3 bits (63), Expect = 1.0
Identities = 4/31 (12%), Positives = 10/31 (32%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ EL R + + ++ +M
Sbjct: 82 THLELKRLIREVSSGSEETFSYSDFLRMMLG 112
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 88.1 bits (219), Expect = 2e-22
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ FR +D+D G+I+ EL+ ++ G +L+++ D +I D++G G I ++DF+
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
Query: 196 QVMLR 200
Q +
Sbjct: 134 QGCIV 138
Score = 67.6 bits (166), Expect = 1e-14
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-EKLTEEEVDAMIAVADQEGLGYI 189
+ L F+ DKD G+I+ EL+ ++N V ++I++ D+E +
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 190 RYEDFVQVMLR 200
+ +F V
Sbjct: 62 NFSEFTGVWKY 72
Score = 35.3 bits (82), Expect = 0.005
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR--Y 191
S + R FD+ G G I + L ++LT+ + D + G+I+ Y
Sbjct: 108 SDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL-QRLTD-----IFRRYDTDQDGWIQVSY 161
Query: 192 EDFVQVML 199
E ++ ++
Sbjct: 162 EQYLSMVF 169
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 88.5 bits (220), Expect = 3e-22
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT-----EEEVDAMIAVADQE 184
+ S + + AFRVFD D DG I AEL H++ N +K V MI D+
Sbjct: 116 RKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKN 175
Query: 185 GLGYIRYEDFVQVM 198
G I + +F ++M
Sbjct: 176 NDGKIDFHEFSEMM 189
Score = 77.7 bits (192), Expect = 3e-18
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E+L F V D+DG G I +L+ + G K D ++ D +G G I Y +F+
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLK-LPYNFDLLLDQIDSDGSGKIDYTEFI 110
Query: 196 QVMLR 200
L
Sbjct: 111 AAALD 115
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 87.1 bits (216), Expect = 7e-22
Identities = 13/85 (15%), Positives = 30/85 (35%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVD 175
+ + + L + D D DG +++ E + + +G LT+++
Sbjct: 82 AVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAI 141
Query: 176 AMIAVADQEGLGYIRYEDFVQVMLR 200
D G I ++F+ +
Sbjct: 142 TCFNTLDFNKNGQISRDEFLVTVND 166
Score = 59.0 bits (143), Expect = 2e-11
Identities = 9/74 (12%), Positives = 21/74 (28%), Gaps = 9/74 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGE---------KLTEEEVDAMIAVADQEGL 186
++ + D GDG I+ + + + + + T +E +
Sbjct: 14 RKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPG 73
Query: 187 GYIRYEDFVQVMLR 200
I E+
Sbjct: 74 VRISVEEAAVNATD 87
Score = 36.6 bits (85), Expect = 0.002
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ ++ + F D + +G I+ E + +
Sbjct: 136 TDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167
Score = 34.7 bits (80), Expect = 0.009
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL-------GEKLTEEEVDAMIAVADQEG 185
E+ +E L I+V E T+ + + + M D +
Sbjct: 56 ETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDK 115
Query: 186 LGYIRYEDFVQVM 198
GY+ +F +
Sbjct: 116 DGYVSLPEFKAFL 128
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 84.6 bits (210), Expect = 8e-22
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL---GEKLTEEEVDAMIAVADQEGLGYI 189
+S +++ +AF V D+D G I EL+ + LT+ E A + D +G G I
Sbjct: 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAI 98
Query: 190 RYEDFVQVM 198
+++ ++
Sbjct: 99 GVDEWAALV 107
Score = 32.2 bits (74), Expect = 0.031
Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 2/36 (5%)
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
L + +V A + + Y+ F +
Sbjct: 3 FSGILADADVAAALKACE--AADSFNYKAFFAKVGL 36
Score = 28.0 bits (63), Expect = 0.86
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT 163
E + D DGDG I V E ++
Sbjct: 81 AETKAFLKAGDSDGDGAIGVDEWAALVK 108
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 87.3 bits (216), Expect = 1e-21
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEK-LTEEEVDAMIAVADQEGL 186
+ + EL F D G+ +++ E + + L E+ A+ D+ G
Sbjct: 122 MLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGT 181
Query: 187 GYIRYEDFVQVMLRG 201
G + +++F
Sbjct: 182 GSVTFDEFAAWASAV 196
Score = 56.8 bits (137), Expect = 3e-10
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRH-VMTNLGEKLTEEEVDAMI---------AVAD 182
E+ + +E F+ FDK+ G + E+ + L V + +
Sbjct: 45 EAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSK 104
Query: 183 QEGLGYIRYEDFVQVMLR 200
E G + +F++ L
Sbjct: 105 LENKGSEDFVEFLEFRLM 122
Score = 36.4 bits (84), Expect = 0.003
Identities = 14/83 (16%), Positives = 24/83 (28%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVD 175
LK+ RV+D+ + G + E L E+
Sbjct: 74 CLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELT 133
Query: 176 AMIAVADQEGLGYIRYEDFVQVM 198
M D G + E+F + +
Sbjct: 134 VMFDEIDASGNMLVDEEEFKRAV 156
Score = 26.4 bits (58), Expect = 6.8
Identities = 7/40 (17%), Positives = 14/40 (35%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEE 173
E+ F+ DK+G G + E + + +
Sbjct: 165 KVEDPAALFKELDKNGTGSVTFDEFAAWASAVKLDADGDP 204
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 84.2 bits (209), Expect = 4e-21
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEE----VDAMIAVADQE 184
+ ++L AFR++D D DG I+ EL V+ + G L + + VD I AD++
Sbjct: 69 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 128
Query: 185 GLGYIRYEDFVQVM 198
G G I +E+F V+
Sbjct: 129 GDGRISFEEFCAVV 142
Score = 61.1 bits (149), Expect = 2e-12
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR 190
D + + L + F+ D D G ++V E +L E V +I + D +G G +
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVD 56
Query: 191 YEDFVQVMLR 200
+++F++ + +
Sbjct: 57 FKEFIEGVSQ 66
Score = 36.4 bits (85), Expect = 0.002
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 137 ELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL-TEEEVDAMIAVADQEGLGYIRYEDFV 195
+ +FD DG+G ++ E ++ K E+++ + D + GYI +
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 196 QVM 198
QV+
Sbjct: 99 QVL 101
Score = 34.1 bits (79), Expect = 0.010
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 120 LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVM--TNLGEKLT 170
LKM +KD + + + + DKDGDG I+ E V+ ++ +K+
Sbjct: 101 LKMMVGN-NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 152
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 82.3 bits (204), Expect = 7e-21
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEK---LTEEEVDAMIAVADQEGLGYI 189
++ +++ + F + D+D G I EL+ + N LT E A +A D +G G I
Sbjct: 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKI 98
Query: 190 RYEDFVQVM 198
E+F ++
Sbjct: 99 GVEEFQSLV 107
Score = 28.0 bits (63), Expect = 0.81
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT 163
E D DGDG I V E + ++
Sbjct: 81 AETKAFLAAGDTDGDGKIGVEEFQSLVK 108
Score = 26.8 bits (60), Expect = 2.3
Identities = 3/36 (8%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
+ + L+ +++++ ++ Y+ F +
Sbjct: 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL 36
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 83.6 bits (207), Expect = 1e-20
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVD 175
++G +K + + L A V D DGDG + VA+ +T G + E+
Sbjct: 78 VTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLAR 135
Query: 176 AMIAVADQEGLGYIRYEDFVQVMLR 200
A D +G G + + V R
Sbjct: 136 QAAAALDTDGDGKVGETEIVPAFAR 160
Score = 65.5 bits (160), Expect = 7e-14
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 15/83 (18%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDA---------------M 177
E + F FD+DG+G I+ ++ + + +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 178 IAVADQEGLGYIRYEDFVQVMLR 200
+AD++G I E+FV ++
Sbjct: 61 AGIADRDGDQRITREEFVTGAVK 83
Score = 38.6 bits (90), Expect = 4e-04
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLG-------EKLTEEEVDAMIAVADQEGLGY 188
+ D+DGD I E ++ + A + VAD +G G
Sbjct: 55 ALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGA 114
Query: 189 IRYEDFVQVM 198
+ D + +
Sbjct: 115 VTVADTARAL 124
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 83.7 bits (207), Expect = 2e-20
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 105 SLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
L ++V E R + + V D DGDG ++V EL+ +M
Sbjct: 97 GLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKA 156
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ +E AD + G + + V +
Sbjct: 157 FD--VPQEAAYTFFEKADTDKSGKLERTELVHLF 188
Score = 65.6 bits (160), Expect = 1e-13
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL---------TEEEVDAMIAVADQEGL 186
L + F FD D DG + + E+ + + + + + V E +
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 187 GYIRYEDFVQVMLR 200
+ ED+V+
Sbjct: 96 NGLLREDWVEANRV 109
Score = 37.9 bits (88), Expect = 0.001
Identities = 9/44 (20%), Positives = 15/44 (34%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAM 177
E F D D G + EL H+ + + + D +
Sbjct: 160 PQEAAYTFFEKADTDKSGKLERTELVHLFRKFWMEPYDPQWDGV 203
Score = 36.3 bits (84), Expect = 0.003
Identities = 8/74 (10%), Positives = 20/74 (27%), Gaps = 11/74 (14%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEK-----------LTEEEVDAMIAVADQE 184
+ + F + + + E L ++ V D +
Sbjct: 81 DAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDD 140
Query: 185 GLGYIRYEDFVQVM 198
G G + ++ +M
Sbjct: 141 GDGTVDVDELKTMM 154
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 82.1 bits (203), Expect = 5e-20
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 105 SLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
SLT F+ +T + ++ + G + + DK+ DG IN E +T
Sbjct: 74 SLTEEQFIRVTEN---LIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA 130
Query: 165 LGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
LG +++ E D G G + ++ + +
Sbjct: 131 LG--MSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
Score = 60.9 bits (148), Expect = 5e-12
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 136 EELLEAFRVFDKDGDGIINVAEL----RHVMTNLGEKLTEEEV-----------DAMIAV 180
+ L + F +D DG+G + A+ +H+ G+ EV D +
Sbjct: 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKE 66
Query: 181 ADQEGLGYIRYEDFVQVMLR 200
A G + E F++V
Sbjct: 67 AGVGSDGSLTEEQFIRVTEN 86
Score = 37.4 bits (87), Expect = 0.001
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 146 DKDGDGIINVAELRHVMTNLG--------EKLTEEEVDAMIAVADQEGLGYIRYEDFVQV 197
DG + + V NL ++ V ++ + D+ G I ++F
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127
Query: 198 M 198
+
Sbjct: 128 L 128
Score = 36.7 bits (85), Expect = 0.002
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEE 173
S E EAF D +G+G +++ EL + + + E
Sbjct: 134 SKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVE 173
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 78.6 bits (194), Expect = 1e-19
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIR 190
D E L F D + G + E R + T L + + +A+ D + G I
Sbjct: 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAIT 79
Query: 191 YEDFVQVMLRG 201
+++F + G
Sbjct: 80 FQEFAR-GFLG 89
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 81.7 bits (202), Expect = 1e-19
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL-GEKLTEEE----VDAMIAVADQEGLGYIR 190
+L AF+++D D DG I+ E+ V+ + G ++TEE+ D + AD++G G +
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVS 173
Query: 191 YEDFVQVM 198
+ +F + +
Sbjct: 174 FVEFTKSL 181
Score = 53.6 bits (129), Expect = 3e-09
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L FR D++ G ++ +L+ + L + +I +G + + FV
Sbjct: 29 LRLHHRFRALDRNKKGYLSRMDLQ-QIGALAVNPLGDR---IIESFFPDGSQRVDFPGFV 84
Query: 196 QVM 198
+V+
Sbjct: 85 RVL 87
Score = 28.2 bits (63), Expect = 1.3
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 128 RVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+V + + + D+DGDG ++ E +
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183
Score = 27.8 bits (62), Expect = 2.3
Identities = 10/74 (13%), Positives = 19/74 (25%), Gaps = 17/74 (22%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVA-----------------DQE 184
F DG ++ V+ + E+ D +
Sbjct: 67 IESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLD 126
Query: 185 GLGYIRYEDFVQVM 198
G I + +QV+
Sbjct: 127 RDGKISRHEMLQVL 140
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 78.0 bits (193), Expect = 1e-19
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 133 ESGEELLEAFRVFD-KDGD-GIINVAELRHVMTNLGEKLT--EEEVDAMIAVADQEGLGY 188
+S EE+ AF VF K+GD I+ EL+ VM LG L +D MI D+ G G
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 189 IRYEDFVQVMLR 200
+ +E+F+ +M +
Sbjct: 62 VSFEEFLVMMKK 73
Score = 28.0 bits (63), Expect = 0.51
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ L E DK+GDG ++ E +M +
Sbjct: 42 KGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 82.8 bits (204), Expect = 1e-19
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 108 FVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG- 166
+ L R +++ E ++ +R +D D G I+ AEL++ + +L
Sbjct: 76 IEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFL 135
Query: 167 -------EKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+E DAM+ + D+ G + D +++
Sbjct: 136 QHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARIL 174
Score = 71.6 bits (175), Expect = 2e-15
Identities = 11/94 (11%), Positives = 31/94 (32%), Gaps = 8/94 (8%)
Query: 113 MITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT-- 170
++ L + VE + + F +D G + E+ + ++ E +
Sbjct: 173 ILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPS 232
Query: 171 ------EEEVDAMIAVADQEGLGYIRYEDFVQVM 198
++ + ++ D G I+ + +
Sbjct: 233 ISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
Score = 63.2 bits (153), Expect = 2e-12
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE----------EEVDAMIAVAD 182
L+ ++ FD D +G I EL ++ +KL + + ++ D
Sbjct: 8 LDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYD 67
Query: 183 QEGLGYIRYEDFVQVML 199
G ++ E+ ++L
Sbjct: 68 ATFDGRLQIEELANMIL 84
Score = 43.5 bits (102), Expect = 1e-05
Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
Query: 129 VKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN------------LGEKLTEEEVDA 176
+ + E ++FDK+ DG +++ +L ++ + + + +
Sbjct: 141 IPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEK 200
Query: 177 MIAVADQEGLGYIRYEDFVQVM 198
+ A D G + + +
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFV 222
Score = 37.4 bits (86), Expect = 0.002
Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 15/98 (15%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEA----FRVFDKDGDGIINVAELRHVMTNLGEKLT- 170
L + + + KD + E + + +D DG + + EL +++ E
Sbjct: 33 LDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLL 92
Query: 171 ----------EEEVDAMIAVADQEGLGYIRYEDFVQVM 198
E + D + GYI + +
Sbjct: 93 IFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFL 130
Score = 30.8 bits (69), Expect = 0.25
Identities = 6/33 (18%), Positives = 11/33 (33%)
Query: 131 DVESGEELLEAFRVFDKDGDGIINVAELRHVMT 163
+ + D + DG I +EL +
Sbjct: 235 GGDLDKFRECLLTHCDMNKDGKIQKSELALCLG 267
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 81.2 bits (201), Expect = 2e-19
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ L FR D+DG ++ E R + LG L + E + + D+ G G + E+F+
Sbjct: 37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFL 96
Query: 196 QVMLR 200
+ +
Sbjct: 97 RALRP 101
Score = 77.4 bits (191), Expect = 5e-18
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 136 EELLEAFRVFDKDGDGIINVAELR-------HVMTNLGEKLTEEEVDAMIAVAD-QEGLG 187
+ AF D+ GDG++ V +LR H GE +E + + D E G
Sbjct: 109 AVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDG 168
Query: 188 YIRYEDFVQVM 198
+ +F
Sbjct: 169 QVTLAEFQDYY 179
Score = 42.7 bits (101), Expect = 2e-05
Identities = 14/63 (22%), Positives = 26/63 (41%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E R +D++G G +++ E + + E + A A D+ G G + +D
Sbjct: 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLR 132
Query: 196 QVM 198
V
Sbjct: 133 GVY 135
Score = 31.5 bits (72), Expect = 0.11
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 136 EELLEAFRVFDK-DGDGIINVAELRHVMTNLGEKL-TEEEVDAMI 178
E L FD + DG + +AE + + + + T+EE AM+
Sbjct: 152 EVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEEFVAMM 196
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 82.9 bits (205), Expect = 2e-19
Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-EKLTEEEVDAMIAVADQEGLGYIRYE 192
L + D D G ++ E++ V+ + + ++ + +V D + + Y+
Sbjct: 251 CLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQ 310
Query: 193 DFVQVMLR 200
+FV ++L
Sbjct: 311 EFVMLVLL 318
Score = 82.5 bits (204), Expect = 4e-19
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L+ FR D + +G ++ E R LG + DA+ AD++ + + ++V
Sbjct: 188 AALVADFRKIDTNSNGTLSRKEFREHFVRLGFDK-KSVQDALFRYADEDESDDVGFSEYV 246
Query: 196 QVMLRG 201
+ L
Sbjct: 247 HLGLCL 252
Score = 77.9 bits (192), Expect = 2e-17
Identities = 11/64 (17%), Positives = 24/64 (37%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L + F G G + +L+ V+ + + E + + + + + G + Y V
Sbjct: 122 NILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLV 181
Query: 196 QVML 199
V
Sbjct: 182 AVAN 185
Score = 40.9 bits (96), Expect = 1e-04
Identities = 6/69 (8%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG---EKLTEEEVDAMIAVADQEGLGYI 189
+ +E +D+ + E ++ + +++ + + GY
Sbjct: 48 QKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYN 107
Query: 190 RYEDFVQVM 198
R ++
Sbjct: 108 RLRPSKPML 116
Score = 30.5 bits (69), Expect = 0.28
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL 165
++ F V D D ++ E ++ +
Sbjct: 290 KKFEHQFSVVDVDDSKSLSYQEFVMLVLLM 319
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 77.3 bits (191), Expect = 4e-18
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 10/72 (13%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGY------- 188
L AF DKD DG I+ +++ ++ + L ++D G
Sbjct: 108 TFLKAAFNKIDKDEDGYISKSDIVSLVHDKV--LDNNDIDNFFLSVHSIKKGIPREHIIN 165
Query: 189 -IRYEDFVQVML 199
I +++F ML
Sbjct: 166 KISFQEFKDYML 177
Score = 73.9 bits (182), Expect = 7e-17
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ + E F D + +G ++ E+ V+ ++G + + +++ ++ D G I Y +F+
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTEFM 96
Query: 196 QVMLR 200
R
Sbjct: 97 AGCYR 101
Score = 38.0 bits (89), Expect = 7e-04
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
++ + D + G I E + + + A D++ GYI D V
Sbjct: 73 WDINRILQALDINDRGNITYTEFMAGCYRW-KNIESTFLKAAFNKIDKDEDGYISKSDIV 131
Query: 196 QVM 198
++
Sbjct: 132 SLV 134
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 75.5 bits (186), Expect = 1e-17
Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L FR D + D I+ E LG L + A D G + E+FV
Sbjct: 94 GPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFV 151
Query: 196 QVM 198
Sbjct: 152 IAG 154
Score = 53.6 bits (129), Expect = 2e-09
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 11/76 (14%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGE--KLTEEEVDAMIAV---------ADQE 184
+++ F D D DG I + + + ++ E ++
Sbjct: 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA 65
Query: 185 GLGYIRYEDFVQVMLR 200
G I F+ M
Sbjct: 66 GGKGIDETTFINSMKE 81
Score = 37.0 bits (86), Expect = 0.001
Identities = 8/79 (10%), Positives = 21/79 (26%), Gaps = 11/79 (13%)
Query: 131 DVESGEELLEAFRVF------DKDGDGIINVAELRHVMTNL-----GEKLTEEEVDAMIA 179
E + L+++ G I+ + M + + + E +
Sbjct: 42 KAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFR 101
Query: 180 VADQEGLGYIRYEDFVQVM 198
D I +++
Sbjct: 102 AVDTNEDNNISRDEYGIFF 120
Score = 34.3 bits (79), Expect = 0.010
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVM 162
+F D + DG++++ E
Sbjct: 126 DKTMAPASFDAIDTNNDGLLSLEEFVIAG 154
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 75.3 bits (185), Expect = 3e-17
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 128 RVKDVESGEELLEA--------FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
VK VE GE L E F V D GD II+ E V + G + + + DA
Sbjct: 93 CVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFD 150
Query: 180 VADQEGLGYIRYEDFVQVM 198
G + E F ++
Sbjct: 151 TLSDGGKTMVTREIFARLW 169
Score = 48.7 bits (116), Expect = 1e-07
Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 16/81 (19%)
Query: 136 EELLEAFRV-FDKDGDGIINVAELRHVMTNLGE---------------KLTEEEVDAMIA 179
++L F +D + DG+I + + + + D +
Sbjct: 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRK 71
Query: 180 VADQEGLGYIRYEDFVQVMLR 200
AD+ + E+++++
Sbjct: 72 YADENEDEQVTKEEWLKMWAE 92
Score = 38.3 bits (89), Expect = 6e-04
Identities = 4/31 (12%), Positives = 8/31 (25%)
Query: 134 SGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ AF G ++ + T
Sbjct: 141 PKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171
Score = 37.9 bits (88), Expect = 8e-04
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 9/66 (13%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEE---------VDAMIAVADQEGLGYIRYE 192
+ D++ D + E + + + + E ++ M V D G I
Sbjct: 70 RKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKH 129
Query: 193 DFVQVM 198
++ V
Sbjct: 130 EYSTVY 135
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 68.0 bits (167), Expect = 7e-16
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 138 LLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQV 197
F+ D +GDG ++ E++ ++ E+ + + D +G G I +F +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 198 M 198
Sbjct: 62 Y 62
Score = 39.1 bits (92), Expect = 5e-05
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL 165
+ L F+ D DG+G I+ E ++
Sbjct: 36 QLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 70.9 bits (174), Expect = 1e-15
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ F FD D G ++ EL+ +T +G +L+ + V+++ G I ++D++
Sbjct: 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDYI 160
Query: 196 QVMLR 200
++
Sbjct: 161 ACCVK 165
Score = 51.7 bits (124), Expect = 1e-08
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLG-----EKLTEEEVDAMIAVADQEGLG 187
++ + L F DG I+ EL+ +T G + E M+++ D++ G
Sbjct: 30 QTQDPLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 88
Query: 188 YIRYEDFVQVMLR 200
+ + +F ++
Sbjct: 89 TMGFNEFKELWAV 101
Score = 32.0 bits (73), Expect = 0.083
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 136 EELLEAFRVFDKDGDGIINV 155
L ++FR D G++N
Sbjct: 167 RALTDSFRRRDTAQQGVVNF 186
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 69.9 bits (171), Expect = 3e-15
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 10/79 (12%)
Query: 128 RVKDVESGEELLEA--------FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIA 179
+ +S +L F+ D GDGI+++ E ++ N L +V A+
Sbjct: 89 TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYN 146
Query: 180 VADQEGLGYIRYEDFVQVM 198
V G + ++
Sbjct: 147 VITDGGKVTFDLNRYKELY 165
Score = 45.7 bits (108), Expect = 2e-06
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 16/81 (19%)
Query: 136 EELLEAFRVF-DKDGDGIINVAELRHVMTNLGE---------------KLTEEEVDAMIA 179
+++ F F D + DG I + +MT E E+E +
Sbjct: 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKG 67
Query: 180 VADQEGLGYIRYEDFVQVMLR 200
AD + +E+++ + +
Sbjct: 68 RADINKDDVVSWEEYLAMWEK 88
Score = 34.1 bits (78), Expect = 0.016
Identities = 9/72 (12%), Positives = 20/72 (27%), Gaps = 9/72 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEE---------VDAMIAVADQEGL 186
+E + D + D +++ E + + + D G
Sbjct: 60 DEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGD 119
Query: 187 GYIRYEDFVQVM 198
G + E+F
Sbjct: 120 GIVDLEEFQNYC 131
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 68.5 bits (168), Expect = 4e-15
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E F D+DG G + ELR + +G +L+ + + ++ + G I ++D+V
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDYV 127
Query: 196 QVMLR 200
++
Sbjct: 128 ACCVK 132
Score = 46.2 bits (110), Expect = 9e-07
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 142 FRVFDK--DGDGIINVAELRHVMTNLGEKLTE-----EEVDAMIAVADQEGLGYIRYEDF 194
+ F DG ++ EL+ +T G T E MIA+ D++ G + + F
Sbjct: 3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62
Query: 195 VQVMLR 200
++
Sbjct: 63 KELWAA 68
Score = 31.2 bits (71), Expect = 0.13
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 136 EELLEAFRVFDKDGDGIINV 155
L + FR D G N
Sbjct: 134 RALTDFFRKRDHLQQGSANF 153
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 69.4 bits (170), Expect = 6e-15
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYE 192
+ + + F D+D G + + EL G +L+ + M+ + D + G+I +
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 193 DFVQVM 198
+F+ +
Sbjct: 108 EFMAMY 113
Score = 69.0 bits (169), Expect = 9e-15
Identities = 7/65 (10%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E F + + G + E+ + LG + + + + G+ + ++
Sbjct: 117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL-FARGMAFCDLNCWI 175
Query: 196 QVMLR 200
+
Sbjct: 176 AICAF 180
Score = 30.5 bits (69), Expect = 0.27
Identities = 3/66 (4%), Positives = 15/66 (22%), Gaps = 3/66 (4%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE--EEVDAMIAVADQEGLGYIRYED 193
+ G ++ + + + + + + +
Sbjct: 152 QRTSLLLHRLFARGMAFCDLNCWIAICAFA-AQTRSAYQMIFMNPYYGPMKPFNPMEFGK 210
Query: 194 FVQVML 199
F+ V+
Sbjct: 211 FLDVVT 216
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 67.9 bits (166), Expect = 2e-14
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT-NLGEKLTEEE----VDAMIAVADQEGLGYIR 190
+L AFR++D D D I+ EL V+ +G +++E+ D I ADQ+G I
Sbjct: 113 NKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAIS 172
Query: 191 YEDFVQVM 198
+ +FV+V+
Sbjct: 173 FTEFVKVL 180
Score = 47.8 bits (114), Expect = 3e-07
Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
L F DK +G ++ + + + L + +I EG + + F+
Sbjct: 29 TRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLGDR---IINAFFSEGEDQVNFRGFM 84
Query: 196 QVM 198
+ +
Sbjct: 85 RTL 87
Score = 30.1 bits (68), Expect = 0.30
Identities = 8/73 (10%), Positives = 20/73 (27%), Gaps = 16/73 (21%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVA----------------DQEG 185
F +G+ +N + + E+ + D +
Sbjct: 67 INAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDK 126
Query: 186 LGYIRYEDFVQVM 198
I ++ +QV+
Sbjct: 127 DDKISRDELLQVL 139
Score = 28.6 bits (64), Expect = 1.0
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 124 NTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTN 164
+ D + G + D+DGD I+ E V+
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 64.7 bits (158), Expect = 1e-13
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
+ F FD D G ++ EL+ +T +G +L + V+++ G I ++D++
Sbjct: 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTS--GKITFDDYI 129
Query: 196 QVMLR 200
++
Sbjct: 130 ACCVK 134
Score = 45.8 bits (109), Expect = 1e-06
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE-----EEVDAMIAVADQEGLGYIR 190
+ L F DG I+ EL+ +T G E M+++ D++ G +
Sbjct: 2 DPLYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMG 60
Query: 191 YEDFVQVMLR 200
+ +F ++
Sbjct: 61 FNEFKELWAV 70
Score = 30.0 bits (68), Expect = 0.27
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 136 EELLEAFRVFDKDGDGIINV 155
L ++FR D G++N
Sbjct: 136 RALTDSFRRRDSAQQGMVNF 155
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 63.7 bits (155), Expect = 7e-13
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT------NLGEKLTEEEVDAMIAVADQEGLGYI 189
++L F+++D DG+G I+ EL + EE ++ + D G +
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 190 RYEDFVQVMLR 200
E+F+ M +
Sbjct: 153 TLEEFINGMAK 163
Score = 46.7 bits (111), Expect = 8e-07
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLG-EKLTEEEVDAMIAVADQEGLGYIRY 191
+E +R F + G+ + E + ++ G + + +D + D G++ +
Sbjct: 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDF 76
Query: 192 EDFVQVM 198
+F+ +
Sbjct: 77 LEFIAAV 83
Score = 38.6 bits (90), Expect = 5e-04
Identities = 10/57 (17%), Positives = 26/57 (45%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ FD + DG ++ E + + ++ E+++ + D +G G I + + +
Sbjct: 63 YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMF 119
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 64.3 bits (157), Expect = 2e-12
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 111 FVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT 170
F+ + + S E + AF++FDKDG G I+ EL + + +
Sbjct: 403 FIASAID-----------RTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ 451
Query: 171 EEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201
EE++++I D G + + +FV+++
Sbjct: 452 MEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
Score = 50.8 bits (122), Expect = 6e-08
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL--------------GEKLTEEEVDAMIAVA 181
++L E FR D + DG+++ EL E+++D+++ +
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL 390
Query: 182 DQEGLGYIRYEDFV 195
D +G G I Y +F+
Sbjct: 391 DMDGSGSIEYSEFI 404
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 61.3 bits (149), Expect = 3e-12
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
++ ++ FD D G I +EL G L E +I EG G + +++F+
Sbjct: 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEG-GNMDFDNFI 135
Query: 196 QVMLR 200
++R
Sbjct: 136 SCLVR 140
Score = 47.8 bits (114), Expect = 2e-07
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTE--------EEVDAMIAVADQEGLG 187
+ F D D ++ EL +++ + + + + +M+AV D + G
Sbjct: 4 RQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTG 62
Query: 188 YIRYEDFVQVMLR 200
+ +E+F +
Sbjct: 63 KLGFEEFKYLWNN 75
Score = 30.9 bits (70), Expect = 0.19
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 136 EELLEAFRVFDKDGDGIINV 155
+ + AF+ DKDG G I V
Sbjct: 142 DAMFRAFKSLDKDGTGQIQV 161
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 59.8 bits (145), Expect = 2e-11
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLG-------EKLTEEEVDAMIAVADQEGLGY 188
++L F+++D DG+G I+ EL +++ + EE + + D G G
Sbjct: 88 QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGE 147
Query: 189 IRYEDFVQVMLR 200
+ E+F++ + +
Sbjct: 148 LSLEEFMEGVQK 159
Score = 46.3 bits (110), Expect = 9e-07
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
S E + ++ F + G + + E + + + V+ M D GYI +
Sbjct: 12 SATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDF 71
Query: 192 EDFVQVM 198
++V +
Sbjct: 72 MEYVAAL 78
Score = 42.1 bits (99), Expect = 3e-05
Identities = 11/57 (19%), Positives = 27/57 (47%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F FD + DG I+ E ++ + + ++++ + D +G G I + + ++
Sbjct: 58 FETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNII 114
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 58.6 bits (142), Expect = 3e-11
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL-----GEKLTEEE----VDAMIAVADQEGL 186
+ AFR+FD D DG +N +L ++ L +L+ E +D ++ +D +
Sbjct: 98 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRD 157
Query: 187 GYIRYEDFVQVMLR 200
G I +F V+ R
Sbjct: 158 GTINLSEFQHVISR 171
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 58.6 bits (142), Expect = 4e-11
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT--------NLGEKLTEEEVDAMIAVADQEGLG 187
E++ AF+++D G I EL+ ++ L E + E VD AD++ G
Sbjct: 111 EKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDG 170
Query: 188 YIRYEDFVQVMLR 200
I +++ +
Sbjct: 171 KIDIDEWKDFVSL 183
Score = 38.2 bits (89), Expect = 8e-04
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 136 EELLEAFRVFDKD--GDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYED 193
E L E F+ DG+I+ E + + D + V D + G I + +
Sbjct: 37 EALYELFKKLSSSIIDDGLIHKEEFQLAL-FRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 194 FVQVM 198
FV+ +
Sbjct: 96 FVRSL 100
Score = 35.9 bits (83), Expect = 0.004
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRYEDFVQVM 198
F VFD +G+I E + E V + D G+I E+ +++
Sbjct: 80 FDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Score = 29.0 bits (65), Expect = 0.93
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 120 LKMYNTEYRVKDVESGEELLEA-----FRVFDKDGDGIINVAELRHVMTN 164
+M ++ E+++E F D+ DG I++ E + ++
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 60.1 bits (146), Expect = 4e-11
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 111 FVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT 170
F+ + + ++ +E R L AF +FD D G I EL ++ ++
Sbjct: 421 FISVCMD--KQILFSEER---------LRRAFNLFDTDKSGKITKEELANLFG--LTSIS 467
Query: 171 EEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201
E+ + ++ ADQ I +++FV +M +
Sbjct: 468 EKTWNDVLGEADQNKDNMIDFDEFVSMMHKI 498
Score = 54.3 bits (131), Expect = 4e-09
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGE--------KLTEEEVDAMIAVADQEGLG 187
+EL + F+ DK+GDG ++ EL L K EEEVD ++ D + G
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 188 YIRYEDFV 195
YI Y +F+
Sbjct: 415 YIEYSEFI 422
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 60.1 bits (146), Expect = 5e-11
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 111 FVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT 170
FV + + K + S E L AFR+FD D G I+ EL + +
Sbjct: 404 FVTVAMD-----------RKTLLSRERLERAFRMFDSDNSGKISSTELATIFG--VSDVD 450
Query: 171 EEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201
E ++++ D+ G + +++F Q++L+
Sbjct: 451 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481
Score = 52.4 bits (126), Expect = 2e-08
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT-----------NLGEKLTEEEVDAMIAVADQE 184
+EL F DK+GDG ++ AEL L E EVD ++ D +
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 394
Query: 185 GLGYIRYEDFVQVML 199
GYI Y +FV V +
Sbjct: 395 KNGYIEYSEFVTVAM 409
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 58.7 bits (142), Expect = 5e-11
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL-----GEKLTEEE----VDAMIAVADQEGL 186
+ AFR+FD D DG +N +L ++ L +L+ E +D ++ +D +
Sbjct: 129 IKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRD 188
Query: 187 GYIRYEDFVQVMLR 200
G I +F V+ R
Sbjct: 189 GTINLSEFQHVISR 202
Score = 32.9 bits (75), Expect = 0.038
Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 142 FRVFDKD-GDGIINVAELRHVMTNLGEKLT-EEEVDAMIAVADQEGLGYIRYEDFVQVM 198
RVF ++ + +++ + T + + + D + G + ED +++
Sbjct: 97 CRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 155
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 59.7 bits (145), Expect = 6e-11
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 111 FVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT 170
FV + + K + S ++L AF+ FD+DG+G I+V EL V + L
Sbjct: 412 FVTVAMD-----------RKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG--LDHLE 458
Query: 171 EEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201
+ MI+ D G + +E+F +++ +
Sbjct: 459 SKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489
Score = 53.6 bits (129), Expect = 7e-09
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEK--------LTEEEVDAMIAVADQEGLG 187
+EL + FR DK+GDG ++ EL + L + E EVDA++ AD + G
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 188 YIRYEDFV 195
YI Y +FV
Sbjct: 406 YIDYSEFV 413
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 57.9 bits (140), Expect = 7e-11
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 17/82 (20%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT-----------------EEEVDAMI 178
+L F+++DKD +G I+ EL ++ ++ + EE VD +
Sbjct: 95 HKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIF 154
Query: 179 AVADQEGLGYIRYEDFVQVMLR 200
+ D+ G G + +FV+ R
Sbjct: 155 LLVDENGDGQLSLNEFVEGARR 176
Score = 55.6 bits (134), Expect = 5e-10
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 133 ESGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRY 191
+L E ++ F ++ G + + E + + + V+AM D G I +
Sbjct: 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDF 78
Query: 192 EDFVQVMLR 200
++V +
Sbjct: 79 LEYVAALNL 87
Score = 39.4 bits (92), Expect = 2e-04
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 127 YRVKDVESGEELLEA-FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEG 185
++V D E + +EA FR FD +GD I+ E + + E ++ + D++
Sbjct: 49 FKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDR 108
Query: 186 LGYIRYEDFVQVM 198
G I ++ + ++
Sbjct: 109 NGCIDRQELLDIV 121
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 55.6 bits (134), Expect = 6e-10
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT--------NLGEKLTEEEVDAMIAVADQEGLG 187
+++ +F+++D G I E++ ++ NL + + E+ +D AD + G
Sbjct: 122 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 181
Query: 188 YIRYEDFVQVMLRG 201
I E++ ++LR
Sbjct: 182 KIDKEEWRSLVLRH 195
Score = 40.2 bits (94), Expect = 1e-04
Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 119 CLKMYNTEYRVKDVE--------SGEELLEAFRVF-----DKDGDGIINVAELRHVMTNL 165
L +Y + D E S E+ + +F DG+IN E + +
Sbjct: 20 DLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT 79
Query: 166 GEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+K + D + + D + G + +E+F + +
Sbjct: 80 NKKESLF-ADRVFDLFDTKHNGILGFEEFARAL 111
Score = 34.0 bits (78), Expect = 0.016
Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRYEDFVQVM 198
F +FD +GI+ E ++ ++ + + D + G+I ++ Q++
Sbjct: 91 FDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 148
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 53.1 bits (127), Expect = 2e-09
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNL--------GEKLTEEE----VDAMIAVADQ 183
E L F++ D DG+ +++ EL +T++ ++E+E +D ++ D+
Sbjct: 68 ELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDK 127
Query: 184 EGLGYIRYEDFVQVM 198
GYI Y +F + +
Sbjct: 128 NNDGYIDYAEFAKSL 142
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 53.8 bits (128), Expect = 7e-09
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFV 195
E +F FD+ G+++ + R + ++G + E E ++++ D +G + ++ F+
Sbjct: 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFI 784
Query: 196 QVMLR 200
M R
Sbjct: 785 DFMSR 789
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 50.6 bits (121), Expect = 3e-08
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT------------NLGEKLTEEEVDAMIAVADQ 183
E+L AF ++D + DG I E+ ++ N E E V + + D+
Sbjct: 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDK 158
Query: 184 EGLGYIRYEDFVQVMLR 200
GYI ++F +
Sbjct: 159 NEDGYITLDEFREGSKV 175
Score = 40.6 bits (95), Expect = 1e-04
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F VFDKD +G I+ E V++ EE++ + D GYI +++ + ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
Score = 30.6 bits (69), Expect = 0.26
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 112 VMITLSGCLKMYNTEYRVKDVESGEELL--EAFRVFDKDGDGIINVAELRHVMTN 164
++ ++ KM + + + E+ E+ + F++ DK+ DG I + E R
Sbjct: 121 MLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 49.8 bits (119), Expect = 6e-08
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLG------------EKLTEEEVDAMIAVADQ 183
++L AF ++D DG+G I+ AE+ ++ + E E+ + + D
Sbjct: 99 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDT 158
Query: 184 EGLGYIRYEDFVQVMLR 200
G + E+F++
Sbjct: 159 NRDGKLSLEEFIRGAKS 175
Score = 41.4 bits (97), Expect = 4e-05
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+ E+ E ++ F G +++ E + + N + + + D G G I +
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 192 EDFVQVM 198
+F+ +
Sbjct: 83 REFIIAL 89
Score = 40.6 bits (95), Expect = 1e-04
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
FR FD +GDG I+ E ++ E+++ ++ D +G GYI + ++++
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 47.8 bits (114), Expect = 7e-08
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
E F DKD DG ++ E+R + G L + + ++ D + G + + F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAF 70
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 49.3 bits (117), Expect = 1e-07
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN------------LGEKLTEEEVDAMIAVADQ 183
E+L AF ++D + DG I E+ +M + L E E V+ D+
Sbjct: 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDR 224
Query: 184 EGLGYIRYEDFVQVMLR 200
G + ++F++ +
Sbjct: 225 NQDGVVTIDEFLETCQK 241
Score = 38.1 bits (88), Expect = 8e-04
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F FD DG+G I+ + ++ L E++ + D G I E+ + +M
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIM 191
Score = 31.9 bits (72), Expect = 0.11
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVFDK-DGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+ +EL +R F G+++ + + + + + D +G G I +
Sbjct: 89 TKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHF 148
Query: 192 EDFVQVM 198
EDFV +
Sbjct: 149 EDFVVGL 155
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 47.9 bits (114), Expect = 3e-07
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT------------EEEVDAMIAVADQ 183
E+L AF+++D D DG I E+ ++ + + + E+ VD + A+ D+
Sbjct: 99 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158
Query: 184 EGLGYIRYEDFVQVMLR 200
G + ++F +
Sbjct: 159 NADGKLTLQEFQEGSKA 175
Score = 37.1 bits (86), Expect = 0.001
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F VFD++ DG I +E ++ +E++ + D + GYI + + ++
Sbjct: 69 FNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
Score = 30.6 bits (69), Expect = 0.26
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+ +E+ + ++ F G ++ A + + + + V D+ G I +
Sbjct: 23 TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEF 82
Query: 192 EDFVQVM 198
+F+Q +
Sbjct: 83 SEFIQAL 89
Score = 29.0 bits (65), Expect = 0.83
Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 112 VMITLSGCLKMYNTEYRVKDVESGEELL--EAFRVFDKDGDGIINVAELRHVMTN 164
++ + +M + + E+ E F + DK+ DG + + E +
Sbjct: 121 MLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 47.9 bits (114), Expect = 3e-07
Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT------------NLGEKLTEEEVDAMIAVADQ 183
++L+ AF+++D D +G+I+ E+ ++ E E+ V+ + + D+
Sbjct: 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDK 158
Query: 184 EGLGYIRYEDFVQVMLR 200
G + E+F + R
Sbjct: 159 NKDGQLTLEEFCEGSKR 175
Score = 39.4 bits (92), Expect = 2e-04
Identities = 12/57 (21%), Positives = 27/57 (47%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F VFD D +G I+ E ++ +++ + D + G I Y++ ++++
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 37.5 bits (87), Expect = 0.001
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVFDK-DGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+EL + ++ F K G +N +E + + + + V D + GYI +
Sbjct: 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDF 82
Query: 192 EDFVQVM 198
++F+ +
Sbjct: 83 KEFICAL 89
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 46.3 bits (110), Expect = 3e-07
Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ F DK G + + R ++ L + ++ ++ ++D + G + E+F+ M
Sbjct: 18 QLFNSHDKTMSGHLTGPQARTILMQSS--LPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 47.2 bits (112), Expect = 7e-07
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT------------NLGEKLTEEEVDAMIAVADQ 183
E+L AF ++D + DG I E+ +M L E + V+ D+
Sbjct: 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDK 197
Query: 184 EGLGYIRYEDFVQVMLR 200
G + ++F++ +
Sbjct: 198 NKDGVVTIDEFIESCQK 214
Score = 38.7 bits (90), Expect = 5e-04
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F FD D +G ++ + ++ L +E+++ + D GYI E+ + +M
Sbjct: 108 FNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIM 164
Score = 36.8 bits (85), Expect = 0.002
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 120 LKMYNTEYRVKDVE--------SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLT 170
L+M +R + +E + +EL +R F ++ G++N + + + +
Sbjct: 40 LEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGD 99
Query: 171 EEE-VDAMIAVADQEGLGYIRYEDFVQVM 198
+ D + G + +EDF++ +
Sbjct: 100 STTYAHFLFNAFDTDHNGAVSFEDFIKGL 128
Score = 27.2 bits (60), Expect = 3.3
Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 112 VMITLSGCLKMYNTEYRVKDVESGEELL--EAFRVFDKDGDGIINVAELRHVMTN 164
++ + M E F+ DK+ DG++ + E
Sbjct: 160 MLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 45.1 bits (107), Expect = 7e-07
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
FR D I+ + ++ T L+ E+ + ++D + G + +F
Sbjct: 26 NQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAF 82
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 46.1 bits (109), Expect = 1e-06
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 14/79 (17%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT--------------EEEVDAMIAVA 181
++L AF ++D DG+G I+ E+ ++ + + +T E+ + +
Sbjct: 107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYF 166
Query: 182 DQEGLGYIRYEDFVQVMLR 200
+ + ++F++ L
Sbjct: 167 GKNDDDKLTEKEFIEGTLA 185
Score = 38.8 bits (90), Expect = 4e-04
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
FR FD + DG ++ E + T ++++ ++ D +G G I + ++++
Sbjct: 77 FRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 43.6 bits (103), Expect = 2e-06
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F+ D +G I + + T L E+ + ++D + G + ++F
Sbjct: 13 NQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAF 69
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 45.0 bits (106), Expect = 4e-06
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMT------------NLGEKLTEEEVDAMIAVADQ 183
E+L F ++D + DG IN E+ ++ L E + VD D+
Sbjct: 125 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK 184
Query: 184 EGLGYIRYEDFVQVMLR 200
G + ++F++
Sbjct: 185 NKDGIVTLDEFLESCQE 201
Score = 41.5 bits (97), Expect = 6e-05
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F FD G + + ++ L E++ + D GYI E+ + ++
Sbjct: 95 FNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 151
Score = 31.5 bits (71), Expect = 0.12
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+ EL +R F ++ G++N + + + D G +++
Sbjct: 49 TKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 108
Query: 192 EDFVQVM 198
EDFV +
Sbjct: 109 EDFVTAL 115
Score = 30.3 bits (68), Expect = 0.34
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 112 VMITLSGCLKMYNTEYRVKDVESGEELL--EAFRVFDKDGDGIINVAELRHVMTN 164
+M + M E F+ DK+ DGI+ + E
Sbjct: 147 MMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 42.9 bits (101), Expect = 5e-06
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ +R + G + + + G L + + + +AD +G G + ++F +
Sbjct: 15 KYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVAL 71
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 43.3 bits (102), Expect = 9e-06
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL------------TEEEVDAMIAVADQ 183
E+L F ++D + DG IN E+ ++ + + + + VD D+
Sbjct: 92 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK 151
Query: 184 EGLGYIRYEDFVQVMLR 200
G + ++F++
Sbjct: 152 NKDGIVTLDEFLESXQE 168
Score = 41.0 bits (96), Expect = 7e-05
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
F FD G + + ++ L E++ + D GYI E+ + ++
Sbjct: 62 FNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 118
Score = 33.6 bits (77), Expect = 0.018
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 134 SGEELLEAFRVF-DKDGDGIINVAELRHVMTNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
+ EL +R F ++ G++N + + + D G +++
Sbjct: 16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 75
Query: 192 EDFVQVM 198
EDFV +
Sbjct: 76 EDFVTAL 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 44.2 bits (105), Expect = 9e-06
Identities = 7/44 (15%), Positives = 10/44 (22%), Gaps = 4/44 (9%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLT----EEEVD 175
+L D I + + G T E V
Sbjct: 382 TTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVW 425
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 42.2 bits (98), Expect = 5e-05
Identities = 10/59 (16%), Positives = 21/59 (35%)
Query: 138 LLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQ 196
+ R DK+ D +N EL+ + L ++ + + D + E+
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIET 71
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 41.3 bits (96), Expect = 1e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV-ADQEGLGYIRYEDFVQVMLR 200
FR FD D G ++ E+R + G KL + ++A AD E I +++FV+ ++R
Sbjct: 613 FRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDE--LIIDFDNFVRCLVR 670
Score = 39.8 bits (92), Expect = 4e-04
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 140 EAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV-ADQEGLGYIRYEDFVQVM 198
++ F+ D G I EL G L + +I +D+ G + +++F+ +
Sbjct: 808 GIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDET--GNMDFDNFISCL 865
Query: 199 LR 200
+R
Sbjct: 866 VR 867
Score = 37.1 bits (85), Expect = 0.003
Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 29/167 (17%)
Query: 61 YRCSPDTRRCLLMTLRQAQMPGHL---RFMCGLVRLDLGF-------MINVLRFSLTFVN 110
++ ++ R A + F+ LVRL++ F N L ++
Sbjct: 638 FKLPCQL--HQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLIS 695
Query: 111 FVMITLSGCLK-------MYNTEYRVKDVESGEELLEAFRVFDK--DGDGIINVAELRHV 161
++ ++ G L ++ Y + EE + ++F + D ++ EL ++
Sbjct: 696 WLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNI 755
Query: 162 MTNLGEKLTE--------EEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
+ + + + + +M+AV D + G + +E+F +
Sbjct: 756 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802
Score = 28.2 bits (62), Expect = 2.5
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 9/109 (8%)
Query: 100 NVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELR 159
+LRF E + + E + F D I+V EL+
Sbjct: 498 FLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLA-GDDMEISVKELQ 556
Query: 160 HVMTNLGEKLTE--------EEVDAMIAVADQEGLGYIRYEDFVQVMLR 200
++ + K + E +M+ + D++G G + +F + R
Sbjct: 557 TILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605
Score = 27.8 bits (61), Expect = 2.8
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 29/74 (39%)
Query: 94 DLGFMIN-------VLRFS-----LTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEA 141
GF +N + R+S + F NF+ +++ + + A
Sbjct: 832 AAGFHLNQHIYSMIIRRYSDETGNMDFDNFISC----LVRL-------------DAMFRA 874
Query: 142 FRVFDKDGDGIINV 155
FR DK+G G I V
Sbjct: 875 FRSLDKNGTGQIQV 888
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 41.3 bits (96), Expect = 1e-04
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 139 LEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAV-ADQEGLGYIRYEDFVQV 197
+ +R D D G +N E+R + G KL + ++A AD E I +++FV+
Sbjct: 608 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDE--LIIDFDNFVRC 665
Query: 198 MLR 200
++R
Sbjct: 666 LVR 668
Score = 27.8 bits (61), Expect = 2.5
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 29/74 (39%)
Query: 94 DLGFMIN-------VLRFS-----LTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEA 141
+ GF + V RF+ + F NFV +++ E L +
Sbjct: 633 EAGFKLPCQLHQVIVARFADDELIIDFDNFVRC----LVRL-------------EILFKI 675
Query: 142 FRVFDKDGDGIINV 155
F+ D + G I +
Sbjct: 676 FKQLDPENTGTIQL 689
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 40.6 bits (94), Expect = 2e-04
Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 34/183 (18%)
Query: 28 IFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCL-----------LMTLR 76
I I YL L ++ E +R +V + + L L +
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 77 QAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLS--GCLKMYNTEYRVKDVES 134
+ R +V LD F+ +R T N L+ LK Y Y +
Sbjct: 486 HPERMTLFR----MVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK-PYICDNDPK 540
Query: 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDF 194
E L+ A + + + E L + ++ +A I E
Sbjct: 541 YERLVNA----------------ILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584
Query: 195 VQV 197
QV
Sbjct: 585 KQV 587
Score = 37.9 bits (87), Expect = 0.001
Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 34/164 (20%)
Query: 35 LHLTLESEKLD-DCN------RRVVQSLIASEWYRCSPD----TRRCLLMTLRQAQMPGH 83
L + ++ + DC + ++ S D T R L TL Q
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM-SKDAVSGTLR-LFWTLLSKQEEMV 79
Query: 84 LRFMCGLVRLDLGFMINVLRFSLTFVNFVMITLSGCLKMYNTEYRVKDVESGEELLEAFR 143
+F+ ++R++ F+++ ++ S +MY E R + L +
Sbjct: 80 QKFVEEVLRINYKFLMSPIK-------TEQRQPSMMTRMYI-EQR-------DRLYNDNQ 124
Query: 144 VFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLG 187
VF K NV+ L+ L + L E + + G G
Sbjct: 125 VFAKY-----NVSRLQPY-LKLRQALLELRPAKNVLIDGVLGSG 162
Score = 31.4 bits (70), Expect = 0.21
Identities = 18/164 (10%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 17 ITQRVTILIEFIFINVGYLHLTLESEKLDDCNRRVVQSLIASEWYRCSPDTRRCLLMTLR 76
+T R + +F+ H++L+ V+SL+ + C P L
Sbjct: 270 LTTRFKQVTDFL-SAATTTHISLD-HHSMTLTPDEVKSLLLK-YLDCRPQD-------LP 319
Query: 77 QAQMPGHLRFMCGLVRLDLGFMINVL-RFSLTFVNFVMITLSGCLKMYN-TEYRVKDVES 134
+ ++ ++ + + + + + + L + EYR
Sbjct: 320 R-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR------ 372
Query: 135 GEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMI 178
++ + VF ++ +++ + + + +V ++
Sbjct: 373 --KMFDRLSVFPPS----AHIPT--ILLSLIWFDVIKSDVMVVV 408
Score = 29.1 bits (64), Expect = 1.3
Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Query: 131 DVESGEELLEAF----RVF----DKDGDGIINVAELRHV-MTNLGEKLTEEEVDAMIA 179
+V++ + AF ++ K ++ A H+ + + LT +EV +++
Sbjct: 252 NVQN-AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.4 bits (94), Expect = 2e-04
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 85/189 (44%)
Query: 13 EHLPITQRVTI-LIEFIFINVGYLHLTLESEKLDDCNRRVV----QSLIASEWYRCSPDT 67
HLP ++V I L +N G +L VV QSL
Sbjct: 358 SHLPAGKQVEISL-----VN-GAKNL-------------VVSGPPQSLYG---------- 388
Query: 68 RRCLLMTLR---------QAQMPGHLRFMCGLVRLDLGFMINVLRFSLTFVNFVMIT--- 115
L +TLR Q+++P R L+FS F+ +
Sbjct: 389 ---LNLTLRKAKAPSGLDQSRIPFSER---------------KLKFS---NRFLPVASPF 427
Query: 116 ----LSGCLKMYNTEYRVKDVE-SGEELLEAFRVFD-KDGDGIINVAELRHVMTNLGEKL 169
L + N + +V + +++ V+D DG ++LR + ++ E++
Sbjct: 428 HSHLLVPASDLINKDLVKNNVSFNAKDI--QIPVYDTFDG------SDLRVLSGSISERI 479
Query: 170 TEEEVDAMI 178
VD +I
Sbjct: 480 ----VDCII 484
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases,
like, EF-hand, structural genomics, structural genomics
CON SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 38.0 bits (88), Expect = 7e-04
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTN----LGEKLTEEEVDAMIAVADQEGLGYIRY 191
F+ G++ ++L + N G ++ E + + G + +
Sbjct: 76 VHYQHVFQKVQTSP-GVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSV-GRVSF 133
Query: 192 EDFVQVMLR 200
V ++R
Sbjct: 134 PSLVCFLMR 142
Score = 31.8 bits (72), Expect = 0.071
Identities = 9/64 (14%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 143 RVFDKDGDGIINVAELRHVMTNLGEK------LTEEEVDAMIAVADQEGLGYIRYEDFVQ 196
+ + D I+ +L+ ++ + +E +++A+ + + G + E+F +
Sbjct: 13 GLVPRGSD--IDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFAR 70
Query: 197 VMLR 200
+ R
Sbjct: 71 LWKR 74
Score = 26.0 bits (57), Expect = 6.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 136 EELLEAFRVFDKDGDGII 153
E + + FR KDG G+
Sbjct: 144 EAMAKTFRNLSKDGKGLY 161
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Length = 86
Score = 35.9 bits (82), Expect = 0.001
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 133 ESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVA-----DQEGLG 187
E +E ++ F +FD++ + I V++ ++T LG+ T+ E +A++ A D++ +G
Sbjct: 11 EEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIG 70
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 35.9 bits (83), Expect = 0.002
Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 134 SGEELLEAFRVFDK--DGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRY 191
E+ + +FD +G ++ +++ V+ N L + + + ++D + G +
Sbjct: 10 KPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDR 67
Query: 192 EDFVQVM 198
++F M
Sbjct: 68 DEFAVAM 74
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 36.0 bits (83), Expect = 0.002
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Query: 143 RVFDK--DGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVM 198
+ F G I + R+ G L + + + A+AD G + +F M
Sbjct: 37 QQFHSLKPISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAM 92
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 34.5 bits (79), Expect = 0.005
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 16/75 (21%)
Query: 142 FRVFDKDGDGIINVAELRHVMTNLGEKL------------TEEEVDAMIAV----ADQEG 185
F + D + DG+++ EL + T EK+ EEE M D
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 186 LGYIRYEDFVQVMLR 200
+ E+F+ R
Sbjct: 86 DRLVTLEEFLASTQR 100
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 32.7 bits (75), Expect = 0.011
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 136 EELLEAFRVFD-KDGD-GIINVAELRHVM-TNLGEKLTEEE-VDAMIAVADQEGLGYIRY 191
EL F + K+GD ++ EL+ ++ L +D + D+ G G + +
Sbjct: 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSF 66
Query: 192 EDFVQVM 198
E+F ++
Sbjct: 67 EEFQVLV 73
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus}
SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Length = 554
Score = 31.7 bits (73), Expect = 0.14
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D +GI+NV+ E + +TN +L++E+++ M+ A++
Sbjct: 478 FDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEK 524
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics,
APC89502.3, peptide binding, chaperone, BIP, PSI-2;
1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Length = 152
Score = 30.6 bits (70), Expect = 0.15
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
F D +GI+ V+ +TN +LT+EE+D M+ A++
Sbjct: 87 FALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEK 133
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics,
APC90015.11, peptide-binding domain, HS 2, protein
structure initiative; 2.39A {Caenorhabditis elegans}
Length = 152
Score = 30.6 bits (70), Expect = 0.15
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
F+ D +GI+NV+ R + N +LT+ ++D M+ A Q
Sbjct: 87 FNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQ 133
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain,
structural genomics, APC90014. 2, protein structure
initiative; 1.85A {Caenorhabditis elegans}
Length = 152
Score = 30.6 bits (70), Expect = 0.15
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
F+ D +GI++V+ + + +TN +L+ E+++ MI AD+
Sbjct: 87 FEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADK 133
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 30.8 bits (69), Expect = 0.19
Identities = 9/81 (11%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Query: 119 CLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMI 178
C+ M E ++ ++ ++ EL+ L ++ + +
Sbjct: 51 CIGM------DGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFF 104
Query: 179 AVADQEGLGYIRYEDFVQVML 199
+ D+ G + E+ +++
Sbjct: 105 DMVDKNADGRLTAEEVKEIIA 125
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology,
structural genomics, NEW YORK structura genomics
research consortium, two domain; 2.30A {Rhizobium etli}
Length = 330
Score = 31.2 bits (71), Expect = 0.20
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 24/79 (30%)
Query: 125 TEYRVKDVESGEELLEAFRVFDKDGDGIINV------AEL--------RHVMTNLGEK-- 168
T V + E +L+A + D + E +HV EK
Sbjct: 62 TVEGVNSYTTIEAMLDA----EPSIDAVSLCMPPQYRYEAAYKALVAGKHVFL---EKPP 114
Query: 169 -LTEEEVDAMIAVADQEGL 186
T EV + A+A+++G
Sbjct: 115 GATLSEVADLEALANKQGA 133
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 28.7 bits (64), Expect = 0.42
Identities = 10/70 (14%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 136 EELLEAFRVF-DKDGDGI-INVAELRHVMTN-----LGEKLTEEEVDAMIAVADQEGLGY 188
++ F+ + + GD + AEL+ ++ + E + + ++V D
Sbjct: 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCE 69
Query: 189 IRYEDFVQVM 198
+ + ++V+ +
Sbjct: 70 VDFVEYVRSL 79
>3cp5_A Cytochrome C; electron transfer protein, electron transport; HET:
HEC; 1.24A {Rhodothermus marinus}
Length = 124
Score = 28.1 bits (62), Expect = 1.1
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 116 LSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVD 175
L K Y + + + ++ + V E +MT++ L+EE+
Sbjct: 60 LRDVTKRRGPVYIMNVMLNPNGMI------QRHPVMKQLVQEYGTMMTDMA--LSEEQAR 111
Query: 176 AMIAVADQEGLGYIRYED 193
A++ Y+R
Sbjct: 112 AILE--------YLRQVA 121
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein
structure initiativ midwest center for structural
genomics; 2.50A {Bordetella bronchiseptica}
Length = 387
Score = 28.6 bits (64), Expect = 1.2
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
Query: 160 HVMTNLGEK---LTEEEVDAMIAVADQEG 185
H++ EK L+ +E D MI ++ G
Sbjct: 90 HIIV---EKPLTLSRDEADRMIEAVERAG 115
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free,
signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A
2cnp_A 2jtt_A
Length = 90
Score = 27.0 bits (60), Expect = 1.4
Identities = 12/68 (17%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 136 EELLEAFRVF-DKDGD-GIINVAELRHVMTN---LGEKLTEEEVDAMIAVADQEGLGYIR 190
L+ F + ++GD ++ EL+ ++ +G KL + E+ ++ D+ +
Sbjct: 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 69
Query: 191 YEDFVQVM 198
++++V +
Sbjct: 70 FQEYVTFL 77
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein
structure initiative, NEW YORK SGX research center for
structural genomics; 2.14A {Thermotoga maritima}
Length = 337
Score = 28.4 bits (64), Expect = 1.5
Identities = 6/29 (20%), Positives = 12/29 (41%), Gaps = 6/29 (20%)
Query: 160 HVMTNLGEK---LTEEEVDAMIAVADQEG 185
H EK T E+++ + +V +
Sbjct: 93 HAFV---EKPIATTFEDLEKIRSVYQKVR 118
>2hjm_A Hypothetical protein PF1176; singleton protein PF1176, structural
genomics, secsg, PSI, P structure initiative; 2.90A
{Pyrococcus furiosus}
Length = 103
Score = 26.9 bits (59), Expect = 1.9
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 155 VAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYIRYEDFVQVMLRG 201
V +++ + L E+ + ++ I + G+ R E F + + G
Sbjct: 10 VEKVKELCLELEEENLAKAIERFITL--THGIEKTRGEAFAKASIYG 54
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 28.1 bits (63), Expect = 2.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 14/56 (25%)
Query: 131 DVESGEEL----LEAF-RVFDKDGDGIINVAE-LRHVMTNLGEKLTEEEVDAMIAV 180
VE+GE+L L+ F R+ D ++N A LR ++++E+ D + V
Sbjct: 75 SVEAGEKLVKTALDTFGRI-----DVVVNNAGILRDRSF---SRISDEDWDIIQRV 122
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12,
HSP70 protein, peptide-BIN domain, PSI-2, protein
structure initiative; 1.72A {Caenorhabditis elegans}
Length = 151
Score = 26.9 bits (60), Expect = 3.1
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 9/47 (19%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D +GI+NV+ E + V+ + G L++++++ MI A++
Sbjct: 87 FDIDANGIVNVSARDRGTGKEQQIVIQSSG-GLSKDQIENMIKEAEK 132
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 26.9 bits (59), Expect = 3.6
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 130 KDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEVDAMIAVADQEGLGYI 189
+D S E L + D D DG I V E + E + ++ + +I
Sbjct: 9 EDRFSLEALQTIHKQMDDDKDGGIEVEESDEF---IREDMKYKDATNKHS-HLHREDKHI 64
Query: 190 RYEDFVQ 196
ED +
Sbjct: 65 TIEDLWK 71
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 26.6 bits (58), Expect = 3.7
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 136 EELLEAFRVFDKDGDGIINVAELRHVMTNLGEKL 169
E+ F +D+DGD + E + + +L ++
Sbjct: 80 AEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKER 113
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate
binding domain, structural G consortium, SGC, chaperone;
2.80A {Homo sapiens}
Length = 182
Score = 26.8 bits (60), Expect = 4.2
Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 9/47 (19%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D +GI++V+ E + V+ + G L++++++ M+ A++
Sbjct: 107 FDIDANGIVHVSAKDKGTGREQQIVIQSSG-GLSKDDIENMVKNAEK 152
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain
rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus
HTA426}
Length = 509
Score = 27.2 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D +GI++V E + + L+EEE+ MI A++
Sbjct: 445 FDIDANGIVHVRAKDLGTNKEQSITIKS-SSGLSEEEIQRMIKEAEE 490
>3sjl_A Methylamine utilization protein MAUG; MAUG, C-heme, quinone
cofactor, oxidoreductase-electron transport complex;
HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB:
3sle_A* 3svw_A* 3l4m_A* 3l4o_A* 3pxs_A* 3pxt_A* 3pxw_A*
3orv_A* 3rmz_A* 3rlm_A* 3rn0_A* 3rn1_A*
Length = 373
Score = 27.1 bits (60), Expect = 4.7
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 115 TLSGCLKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIINVAELRHVMTNLGEKLTEEEV 174
L + YN Y + E+ + + +++AEL+ G L + V
Sbjct: 286 DLRTAILFYNK-YTSRRPEAKINPETGAPWGEPEVARNLSLAELQ-----SGLMLDDGRV 339
Query: 175 DAMIA 179
DA++A
Sbjct: 340 DALVA 344
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical
dehydratase, lyase; 1.82A {Clostridium difficile} PDB:
3o3n_A* 3o3o_A
Length = 408
Score = 26.6 bits (58), Expect = 5.8
Identities = 21/140 (15%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 56 IASEWYRCSPDTRRCLLMTLRQAQMPGHLRFMCGLVRLDLGFMIN--VLRFSLTFVNFVM 113
+ E ++ L A+ G+ +C R + G + N + +F++
Sbjct: 52 LYPENQAAGVAAKKGSLELCEIAESKGYSIDLCAYARTNFGLLENGGCEALDMPAPDFLL 111
Query: 114 ITLSGC---LKMYNTEYRVKDVESGEELLEAFRVFDKDGDGIIN--VAELRHVMTNL--- 165
+ C +K Y R D+ + F D+ I+ A+ + L
Sbjct: 112 CCNNICNQVIKWYENISRELDIPL-IMIDTTFNNEDEVTQSRIDYIKAQFEEAIKQLEII 170
Query: 166 -GEKLTEEEVDAMIAVADQE 184
G+K ++ + ++ ++ +
Sbjct: 171 SGKKFDPKKFEEVMKISAEN 190
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB:
3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A
1bpr_A 2bpr_A 1dg4_A
Length = 219
Score = 26.0 bits (58), Expect = 6.8
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D DGI++V+ E + + L E+E+ M+ A+
Sbjct: 88 FDIDADGILHVSAKDKNSGKEQKITIKA-SSGLNEDEIQKMVRDAEA 133
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 26.7 bits (59), Expect = 7.0
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 14/56 (25%)
Query: 131 DVESGEEL----LEAF-RVFDKDGDGIINVA-ELRHVMTNLGEKLTEEEVDAMIAV 180
V G ++ ++AF RV D ++N A LR K +E++ + + V
Sbjct: 85 SVIDGAKVIETAIKAFGRV-----DILVNNAGILRDRSL---VKTSEQDWNLVNDV 132
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding
channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Length = 674
Score = 26.0 bits (58), Expect = 9.1
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 159 RHVMTNLGEKLTEEEVDAMIAVAD-QEGLGYIRY 191
RH T G + E ++ +I GL +R
Sbjct: 508 RHYRT--GSAVPRELLEKLIESRQANTGLFNLRQ 539
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding,
protein folding, acetylation, ATP-binding, cell inner
membrane; NMR {Escherichia coli}
Length = 605
Score = 26.1 bits (58), Expect = 10.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 145 FDKDGDGIINVA--------ELRHVMTNLGEKLTEEEVDAMIAVADQ 183
FD D DGI++V+ E + + L E+E+ M+ A+
Sbjct: 476 FDIDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEA 521
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.328 0.142 0.418
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,160,818
Number of extensions: 188352
Number of successful extensions: 1601
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1298
Number of HSP's successfully gapped: 388
Length of query: 201
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 112
Effective length of database: 4,216,824
Effective search space: 472284288
Effective search space used: 472284288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (24.8 bits)