Query psy10246
Match_columns 287
No_of_seqs 177 out of 1083
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 21:36:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qio_A GAG-POL polyprotein; RN 99.9 5.5E-23 1.9E-27 173.5 4.6 116 139-257 9-147 (150)
2 3h08_A RNH (ribonuclease H); R 99.9 1.6E-22 5.5E-27 167.2 5.9 115 139-258 1-145 (146)
3 2qkb_A Ribonuclease H1, HS-RNA 99.9 7.8E-22 2.7E-26 165.0 8.1 117 139-258 4-152 (154)
4 1jl1_A Ribonuclease HI; RNAse 99.8 1.6E-21 5.6E-26 163.9 7.5 117 141-262 3-148 (155)
5 2e4l_A Ribonuclease HI, RNAse 99.8 3.5E-21 1.2E-25 162.6 6.6 115 141-260 5-149 (158)
6 2lsn_A Reverse transcriptase; 99.8 7E-22 2.4E-26 170.1 2.4 114 141-257 6-163 (165)
7 3p1g_A Xenotropic murine leuke 99.8 5.5E-21 1.9E-25 164.2 7.4 111 142-262 23-161 (165)
8 2kq2_A Ribonuclease H-related 99.8 1.2E-21 4E-26 164.0 2.3 113 140-261 4-141 (147)
9 1ril_A Ribonuclease H; hydrola 99.8 4.6E-20 1.6E-24 157.3 5.1 113 142-259 8-150 (166)
10 3hst_B Protein RV2228C/MT2287; 99.7 1.3E-16 4.6E-21 128.9 9.0 109 142-258 3-134 (141)
11 3u3g_D Ribonuclease H, RNAse H 99.7 1.3E-16 4.3E-21 128.1 8.8 109 142-258 3-138 (140)
12 1mu2_A HIV-2 RT; HIV-2 reverse 99.6 1.8E-16 6.3E-21 156.6 8.9 107 138-255 432-555 (555)
13 2zd1_A Reverse transcriptase/r 99.6 1.3E-16 4.4E-21 157.8 6.8 108 136-254 433-557 (557)
14 2ehg_A Ribonuclease HI; RNAse 99.6 2.2E-15 7.6E-20 124.2 8.0 107 143-258 2-135 (149)
15 1zbf_A Ribonuclease H-related 99.0 1.7E-11 5.7E-16 103.2 -2.2 104 142-249 11-139 (142)
16 4htu_A Ribonuclease H, RNAse H 98.9 3.4E-10 1.2E-14 95.1 1.5 79 142-224 5-103 (134)
17 4aef_A Neopullulanase (alpha-a 62.4 28 0.00096 34.5 9.0 70 175-244 236-316 (645)
18 1wzl_A Alpha-amylase II; pullu 57.9 28 0.00095 34.1 8.0 69 176-244 171-250 (585)
19 1j0h_A Neopullulanase; beta-al 57.3 45 0.0015 32.6 9.4 75 175-249 173-258 (588)
20 1ea9_C Cyclomaltodextrinase; h 56.2 22 0.00074 34.9 6.9 68 176-243 170-248 (583)
21 4aie_A Glucan 1,6-alpha-glucos 50.5 31 0.0011 32.4 6.8 69 176-244 30-110 (549)
22 2bhu_A Maltooligosyltrehalose 44.1 50 0.0017 32.7 7.4 70 177-246 143-225 (602)
23 1ji1_A Alpha-amylase I; beta/a 41.6 71 0.0024 31.6 8.0 67 176-242 189-271 (637)
24 1zja_A Trehalulose synthase; s 35.2 88 0.003 30.3 7.4 67 176-242 30-108 (557)
25 1lwj_A 4-alpha-glucanotransfer 34.0 1.4E+02 0.0047 27.7 8.3 68 177-244 22-100 (441)
26 2wc7_A Alpha amylase, catalyti 33.0 93 0.0032 29.3 7.1 68 176-243 54-132 (488)
27 1m53_A Isomaltulose synthase; 32.8 86 0.0029 30.5 6.9 67 176-242 43-121 (570)
28 2z1k_A (NEO)pullulanase; hydro 32.6 1.8E+02 0.0063 27.0 9.0 69 176-244 48-127 (475)
29 3m07_A Putative alpha amylase; 30.9 99 0.0034 30.8 7.1 69 178-246 154-235 (618)
30 3vgf_A Malto-oligosyltrehalose 28.8 1E+02 0.0034 30.1 6.6 69 177-245 118-199 (558)
31 4gqr_A Pancreatic alpha-amylas 28.1 35 0.0012 31.3 3.0 32 210-241 73-104 (496)
32 2guy_A Alpha-amylase A; (beta- 28.1 50 0.0017 31.0 4.2 33 211-243 95-127 (478)
33 3aj7_A Oligo-1,6-glucosidase; 27.8 1.4E+02 0.0047 29.3 7.4 68 176-243 38-117 (589)
34 1mxg_A Alpha amylase; hyperthe 27.6 70 0.0024 30.0 5.1 33 211-243 84-116 (435)
35 2ze0_A Alpha-glucosidase; TIM 26.6 1.3E+02 0.0045 29.0 7.0 67 176-242 29-107 (555)
36 1ua7_A Alpha-amylase; beta-alp 25.9 54 0.0019 30.4 4.0 32 212-243 73-104 (422)
37 4aee_A Alpha amylase, catalyti 25.5 1.7E+02 0.0059 29.2 7.8 70 175-244 262-342 (696)
38 4aio_A Limit dextrinase; hydro 25.0 57 0.0019 32.8 4.2 30 214-243 379-408 (884)
39 1hvx_A Alpha-amylase; hydrolas 24.2 52 0.0018 31.5 3.6 65 177-241 23-109 (515)
40 1ht6_A AMY1, alpha-amylase iso 24.1 72 0.0025 29.5 4.5 67 177-243 20-98 (405)
41 1wpc_A Glucan 1,4-alpha-maltoh 23.4 56 0.0019 30.8 3.6 31 211-241 80-110 (485)
42 2zic_A Dextran glucosidase; TI 23.2 1.8E+02 0.006 28.1 7.2 68 176-243 29-108 (543)
43 3bh4_A Alpha-amylase; calcium, 22.5 81 0.0028 29.7 4.5 31 211-241 76-106 (483)
44 1m7x_A 1,4-alpha-glucan branch 22.3 73 0.0025 31.5 4.3 65 178-242 155-233 (617)
45 1ud2_A Amylase, alpha-amylase; 22.2 61 0.0021 30.5 3.6 31 211-241 78-108 (480)
46 1uw7_A NSP9; viral protein, re 22.0 21 0.00073 30.0 0.3 47 34-87 14-67 (143)
47 1gcy_A Glucan 1,4-alpha-maltot 21.8 82 0.0028 30.3 4.5 68 177-244 35-123 (527)
48 3k1d_A 1,4-alpha-glucan-branch 21.2 83 0.0028 32.3 4.5 67 177-243 262-342 (722)
49 3aie_A Glucosyltransferase-SI; 20.7 62 0.0021 34.0 3.5 30 211-240 690-719 (844)
No 1
>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A
Probab=99.87 E-value=5.5e-23 Score=173.46 Aligned_cols=116 Identities=15% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCeEEEEEcCCCCCCCCCCCceEEEEEecCCc--c--hh------HHHHHHHHHHHHchh----cCCCeEEE--Ee---
Q psy10246 139 NVQCSWILSTQASSGCLLINSATGYAMSGYQDT--R--LY------SGAILVMKVLQSVQI----FKIGKWLE--IS--- 199 (287)
Q Consensus 139 ~~~~i~IYTD~GS~~C~k~~G~vG~Avv~~~~~--~--L~------AEL~AIl~ALe~a~~----~~~sk~vI--I~--- 199 (287)
..+.+.|||| || |.+++|.+|+|++...+. . ++ ||++|++.||+.+.. ..||+|++ ++
T Consensus 9 ~~~~~~iytD-Gs--~~~n~g~~g~G~v~~~~~~~~~~~~~~Tnn~aEl~A~i~AL~~~~~~v~i~tDS~~v~~~i~~w~ 85 (150)
T 3qio_A 9 IVGAETFYVD-GA--ANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIITQWI 85 (150)
T ss_dssp CTTCEEEEEE-EE--ECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHHSCSEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEc-cC--CCCCCCCeEEEEEEEcCCEEEEeCCCCCHHHHHHHHHHHHHHhCCCcEEEEeCcHHHHHHHHHHH
Confidence 3456999999 88 999999999997654431 1 11 999999999998631 12333333 11
Q ss_pred -cccCCCcccCCCChHHHHHHHHHHh---hCCCceEEEEeccCCCCccchHHHHHHHHHHhh
Q psy10246 200 -VLGSPDVKKVIFSPWSVRNVRAMKF---ARDINIKFLWIPSHCGIVENERVDQAAKNSIYA 257 (287)
Q Consensus 200 -aL~n~~~K~~~~~p~~I~~ii~eL~---~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~ 257 (287)
.|+...|++..+.+..++++++++. .+..+|.|.|||||+|++|||+||+||++|+..
T Consensus 86 ~~W~~~gw~~~~g~~v~n~~l~~~l~~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~ 147 (150)
T 3qio_A 86 HNWKKRGWKTADKKPVKNVDLVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRK 147 (150)
T ss_dssp HHHCC------------CHHHHHHHHHHHTTCSEEEEEECCTTSCCHHHHHHHHHHHTTTSC
T ss_pred HHHhhcCcCcCcCcccccHHHHHHHHHHHhhcCceEEEEccCcCCChhHHHHHHHHHHHHHH
Confidence 2333346665556667777776543 366899999999999999999999999999864
No 2
>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}
Probab=99.86 E-value=1.6e-22 Score=167.21 Aligned_cols=115 Identities=11% Similarity=0.025 Sum_probs=77.7
Q ss_pred CCCeEEEEEcCCCCCCCCCCCceEEEEEec-CC------cchh------HHHHHHHHHHHHchhcCCCeEEE-------E
Q psy10246 139 NVQCSWILSTQASSGCLLINSATGYAMSGY-QD------TRLY------SGAILVMKVLQSVQIFKIGKWLE-------I 198 (287)
Q Consensus 139 ~~~~i~IYTD~GS~~C~k~~G~vG~Avv~~-~~------~~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I 198 (287)
|.+.+.|||| || |.+++|.+|||++.. .+ +.++ ||++|++.||+.+.+ ..++.| +
T Consensus 1 m~~~i~iytD-Gs--~~~n~g~~g~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~A~~~AL~~~~~--~~~v~I~tDS~~vi 75 (146)
T 3h08_A 1 MEKTITIYTD-GA--ASGNPGKGGWGALLMYGSSRKEISGYDPATTNNRMELMAAIKGLEALKE--PARVQLYSDSAYLV 75 (146)
T ss_dssp -CCEEEEEEE-EE--ESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSS--CCEEEEEESCHHHH
T ss_pred CCceEEEEEe-cC--CCCCCCceEEEEEEEECCeeEEeecCCCCCcHHHHHHHHHHHHHHhcCc--cCcEEEEeChHHHH
Confidence 3567999999 99 889999999996533 22 1111 999999999999875 344555 2
Q ss_pred ecccC--------CCcccCCCChHHHHHHHHHHh--hCCCceEEEEeccCCCCccchHHHHHHHHHHhhc
Q psy10246 199 SVLGS--------PDVKKVIFSPWSVRNVRAMKF--ARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQ 258 (287)
Q Consensus 199 ~aL~n--------~~~K~~~~~p~~I~~ii~eL~--~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p 258 (287)
..+.. ..|+++.+.+..++++++++. .+...|.|.|||||+|++|||+||+|||+|+...
T Consensus 76 ~~i~~~w~~~W~~~~w~~~~~~~v~n~~l~~~~~~~~~~~~v~~~~V~gH~g~~~N~~AD~LA~~a~~~~ 145 (146)
T 3h08_A 76 NAMNEGWLKRWVKNGWKTAAKKPVENIDLWQEILKLTTLHRVTFHKVKGHSDNPYNSRADELARLAIKEN 145 (146)
T ss_dssp HHHHSSHHHHHHHTTCC----CCCTTHHHHHHHHHHHHHSEEEEEECCC-CCSHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCccCCCCCcCCHHHHHHHHHHHhhCceEEEEcCCcCCcHhHHHHHHHHHHHHHhC
Confidence 23333 224555555555555544432 1236799999999999999999999999998753
No 3
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*
Probab=99.85 E-value=7.8e-22 Score=164.97 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=84.4
Q ss_pred CCCeEEEEEcCCCCCCCCCCCc---eEEEEEecCC------cchh-------HHHHHHHHHHHHchhcCCCeEEE-----
Q psy10246 139 NVQCSWILSTQASSGCLLINSA---TGYAMSGYQD------TRLY-------SGAILVMKVLQSVQIFKIGKWLE----- 197 (287)
Q Consensus 139 ~~~~i~IYTD~GS~~C~k~~G~---vG~Avv~~~~------~~L~-------AEL~AIl~ALe~a~~~~~sk~vI----- 197 (287)
+.+.+.|||| || |.++++. +|||++...+ ..++ ||++|++.||+.+......++.|
T Consensus 4 ~~~~~~iytD-Gs--~~~n~~~~~~aG~Gvv~~~~~~~~~~~~l~~~~tn~~aEl~A~~~aL~~~~~~~~~~v~i~tDS~ 80 (154)
T 2qkb_A 4 MGDFVVVYTD-GC--CSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSM 80 (154)
T ss_dssp ETTEEEEEEE-EE--EETTTSSSCEEEEEEECSTTCTTCEEEECCSSCCHHHHHHHHHHHHHHHHHHTTCCEEEEEESCH
T ss_pred CCCeEEEEEc-cC--cCCCCCCCCcEEEEEEEECCCceeEEeecCCCCchHHHHHHHHHHHHHHHHhCCCceEEEEECcH
Confidence 4567899999 98 8777653 8999764322 1221 99999999999998766666666
Q ss_pred --EecccCC-------CcccCCCChHHHHHHHHHHh--hCCCceEEEEeccCCCCccchHHHHHHHHHHhhc
Q psy10246 198 --ISVLGSP-------DVKKVIFSPWSVRNVRAMKF--ARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQ 258 (287)
Q Consensus 198 --I~aL~n~-------~~K~~~~~p~~I~~ii~eL~--~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p 258 (287)
++.+.+| .|+.+.+.+..++++++++. .++..|.|.|||||+|++|||+||+|||+|+..+
T Consensus 81 ~vi~~i~~~~~~w~~~~w~~~~~~~~~n~~l~~~i~~l~~~~~v~~~~V~~H~g~~~N~~AD~LA~~a~~~~ 152 (154)
T 2qkb_A 81 FTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGAKQS 152 (154)
T ss_dssp HHHHHHHTHHHHHHTTTSBCTTSSBCTTHHHHHHHHHHHTTCEEEEEECCTTSSCHHHHHHHHHHHHHHTCC
T ss_pred HHHhhhhhhHHHHHhccccccCCCccccHHHHHHHHHHHcCCceEEEEccCCCCCHhHHHHHHHHHHHHHhc
Confidence 2233332 35555555555555555443 2357899999999999999999999999998764
No 4
>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...
Probab=99.84 E-value=1.6e-21 Score=163.93 Aligned_cols=117 Identities=17% Similarity=0.152 Sum_probs=82.5
Q ss_pred CeEEEEEcCCCCCCCCCCCceEEEEEec-CC------cchh------HHHHHHHHHHHHchhcCCCeEEE-------Eec
Q psy10246 141 QCSWILSTQASSGCLLINSATGYAMSGY-QD------TRLY------SGAILVMKVLQSVQIFKIGKWLE-------ISV 200 (287)
Q Consensus 141 ~~i~IYTD~GS~~C~k~~G~vG~Avv~~-~~------~~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I~a 200 (287)
..+.|||| || |.+++|.+|||++.. .+ +.++ ||++|++.||+.+... .++.| +..
T Consensus 3 ~~~~iytD-Gs--~~~n~~~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~~~~~--~~v~I~tDS~~vi~~ 77 (155)
T 1jl1_A 3 KQVEIFTA-GS--ALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEH--AEVILSTDSQYVRQG 77 (155)
T ss_dssp CCEEEEEE-EE--ESSTTEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCCSC--CEEEEEECCHHHHHH
T ss_pred ceEEEEEc-cc--cCCCCCceEEEEEEEECCeEEEEecCCCCCcHHHHHHHHHHHHHHHhCcC--CcEEEEeCHHHHHHH
Confidence 35889999 98 888899999996533 22 1111 9999999999998753 44544 223
Q ss_pred ccCC-------CcccCCCChHHHHHHHHHHh--hCCCceEEEEeccCCCCccchHHHHHHHHHHhhccccc
Q psy10246 201 LGSP-------DVKKVIFSPWSVRNVRAMKF--ARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQLLKS 262 (287)
Q Consensus 201 L~n~-------~~K~~~~~p~~I~~ii~eL~--~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p~~~~ 262 (287)
+..| .|++..+.+..++++++++. .+...|.|.|||||+|++|||+||+|||+|+..+.+.+
T Consensus 78 i~~w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~~~ 148 (155)
T 1jl1_A 78 ITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNPTLED 148 (155)
T ss_dssp HHTTHHHHHHTTTBCTTSCBCTTHHHHHHHHHHTTTCEEEEEECCSSTTCHHHHHHHHHHHHHHHSCCBCC
T ss_pred HHHHHHHHhhcccccccCCccCCHHHHHHHHHHHccCceEEEEcCCCCCCHHHHHHHHHHHHHHhccchhh
Confidence 4432 24444444544444444332 13468999999999999999999999999999876643
No 5
>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A
Probab=99.83 E-value=3.5e-21 Score=162.61 Aligned_cols=115 Identities=20% Similarity=0.199 Sum_probs=80.6
Q ss_pred CeEEEEEcCCCCCCCCCCCceEEEEEe-cCC------cchh------HHHHHHHHHHHHchhcCCCeEEE-------Eec
Q psy10246 141 QCSWILSTQASSGCLLINSATGYAMSG-YQD------TRLY------SGAILVMKVLQSVQIFKIGKWLE-------ISV 200 (287)
Q Consensus 141 ~~i~IYTD~GS~~C~k~~G~vG~Avv~-~~~------~~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I~a 200 (287)
..+.|||| || |.+++|.+|||++. +.+ +.++ ||++|++.||+.+... .++.| +..
T Consensus 5 ~~i~iytD-Gs--~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~tn~~aEl~A~~~AL~~~~~~--~~v~I~tDS~~vi~~ 79 (158)
T 2e4l_A 5 KLIHIFTD-GS--CLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEP--CKIILTSDSQYMRQG 79 (158)
T ss_dssp CEEEEEEE-EE--ESSSSEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSSC--CEEEEEECCHHHHHH
T ss_pred CeEEEEEc-cc--ccCCCCcEEEEEEEEECCEEEEEecCcCCCccHHHHHHHHHHHHHHhccC--CeEEEEeCHHHHHHH
Confidence 46889999 98 88889999999654 332 1111 9999999999998653 45555 223
Q ss_pred ccCC-------CcccCCCChHHHHHHHHHHh--hCCCceEEEEeccCCCCccchHHHHHHHHHHhh-ccc
Q psy10246 201 LGSP-------DVKKVIFSPWSVRNVRAMKF--ARDINIKFLWIPSHCGIVENERVDQAAKNSIYA-QLL 260 (287)
Q Consensus 201 L~n~-------~~K~~~~~p~~I~~ii~eL~--~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~-p~~ 260 (287)
+..| .|++..+.+..+.++++++. .+...|.|.|||||+|++|||+||+|||+|+.. +.+
T Consensus 80 i~~w~~~W~~n~~~~~~g~~v~n~~l~~~i~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~~~~~ 149 (158)
T 2e4l_A 80 IMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQ 149 (158)
T ss_dssp HHTHHHHHHHTTTBCTTSSBCTTHHHHHHHHHHHTTSEEEEEECCTTCCCHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHccccccCCCcccCHHHHHHHHHHHccCcEEEEEccCCCCchhHHHHHHHHHHHHHhchhh
Confidence 3332 24444434444444443332 134789999999999999999999999999987 544
No 6
>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}
Probab=99.83 E-value=7e-22 Score=170.13 Aligned_cols=114 Identities=9% Similarity=0.009 Sum_probs=75.1
Q ss_pred CeEEEEEcCCCCCCCCCCCc-----eEEEEEe-cCC--c------chh----HHHHHHHHHHH----Hchhc-------C
Q psy10246 141 QCSWILSTQASSGCLLINSA-----TGYAMSG-YQD--T------RLY----SGAILVMKVLQ----SVQIF-------K 191 (287)
Q Consensus 141 ~~i~IYTD~GS~~C~k~~G~-----vG~Avv~-~~~--~------~L~----AEL~AIl~ALe----~a~~~-------~ 191 (287)
..++|||| || |++|||+ +|||++. +.+ . ..+ ||++|.+.||+ .+... +
T Consensus 6 ~evviYTD-Gs--c~gNpgp~~~~~aG~Gv~~~~~~~~~~~~~~~~~~tnn~te~~Aei~Al~~al~~al~~~~~v~I~T 82 (165)
T 2lsn_A 6 YEGVFYTD-GS--AIKSPDPTKSNNAGMGIVHATYKPEYQVLNQWSIPLGNHTAQMAEIAAVEFACKKALKIPGPVLVIT 82 (165)
T ss_dssp CSEEEEEE-EE--EEECSSCTTCEEEEEEEEEECCSSSCCEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred ceEEEEEc-CC--CCCCCCCCCCCcEEEEEEEEECCCccEEeccccCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 34889999 99 9999987 8999653 222 1 111 55555555554 44332 2
Q ss_pred CCeEEE--Ee----cccCCCcccCCCChHHHHHHHHHHh---hCCCceEEEEeccCCCC------ccchHHHHHHHHHHh
Q psy10246 192 IGKWLE--IS----VLGSPDVKKVIFSPWSVRNVRAMKF---ARDINIKFLWIPSHCGI------VENERVDQAAKNSIY 256 (287)
Q Consensus 192 ~sk~vI--I~----aL~n~~~K~~~~~p~~I~~ii~eL~---~~g~~V~f~WVPGHsGI------~GNE~AD~LAK~Aa~ 256 (287)
||+|++ ++ .|+...|++....|+.+++++++|. ....+|.|.|||||+|+ +|||+||+||++|+.
T Consensus 83 DS~Yvi~~it~w~~~Wk~ngw~~~~~~pVkN~dL~~~l~~~~~~~~~v~~~~VkgH~g~~~~~~~~gNe~AD~LA~~gA~ 162 (165)
T 2lsn_A 83 DSFYVAESANKELPYWKSNGFVNNKKKPLKHISKWKSIAECLSMKPDITIQHEKGHQPTNTSIHTEGNALADKLATQGSY 162 (165)
T ss_dssp SCHHHHHHHHTHHHHHHHTTSCSCSSSCCSSHHHHHHHHHHHHHCTTCEEEECCSSSCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHhhhhhhhhhheeccccccCCCcccCHHHHHHHHHHHhCCCCEEEEEEeCCCCccCCCCChHHHHHHHHHHHhhh
Confidence 334433 21 2232336666667777777776553 34578999999999995 689999999999986
Q ss_pred h
Q psy10246 257 A 257 (287)
Q Consensus 257 ~ 257 (287)
.
T Consensus 163 ~ 163 (165)
T 2lsn_A 163 V 163 (165)
T ss_dssp H
T ss_pred h
Confidence 4
No 7
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A
Probab=99.83 E-value=5.5e-21 Score=164.23 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=80.5
Q ss_pred eEEEEEcCCCCCCCCCCCceEEEEEecCC-c-----chh-------HHHHHHHHHHHHchhcCCCeEEE-------Eecc
Q psy10246 142 CSWILSTQASSGCLLINSATGYAMSGYQD-T-----RLY-------SGAILVMKVLQSVQIFKIGKWLE-------ISVL 201 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~Avv~~~~-~-----~L~-------AEL~AIl~ALe~a~~~~~sk~vI-------I~aL 201 (287)
.+.|||| || |.+++|.+|||++.+.+ . .++ ||++|++.||+.+. ..++.| ++.+
T Consensus 23 ~i~iytD-Gs--~~~npG~~g~G~vi~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~---~~~v~I~tDS~~vi~~i 96 (165)
T 3p1g_A 23 DYTWYTD-GS--SFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALKMAE---GKKLNVYTDSRYAFATA 96 (165)
T ss_dssp SEEEEEE-EE--EEEETTEEEEEEEEECSSCEEEEEEECTTCCHHHHHHHHHHHHHHHTB---TSEEEEEECCHHHHHHH
T ss_pred CEEEEEE-cc--cCCCCCceEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHcc---CceEEEEEchHHHHhhh
Confidence 5899999 98 88899999999654332 1 111 99999999999983 344555 2223
Q ss_pred cCCCcccCCCChHHHHHHHHHHh---hCCCceEEEEeccCCC-----CccchHHHHHHHHHHhhccccc
Q psy10246 202 GSPDVKKVIFSPWSVRNVRAMKF---ARDINIKFLWIPSHCG-----IVENERVDQAAKNSIYAQLLKS 262 (287)
Q Consensus 202 ~n~~~K~~~~~p~~I~~ii~eL~---~~g~~V~f~WVPGHsG-----I~GNE~AD~LAK~Aa~~p~~~~ 262 (287)
|....+.+..++++++++. .++.+|.|.|||||+| ++|||+||+|||+|+..+..+.
T Consensus 97 ----w~~~~g~~v~n~dl~~~l~~~l~~~~~v~~~wVkgH~g~~~~~~~gNe~AD~LA~~aa~~~~~~~ 161 (165)
T 3p1g_A 97 ----HVHSEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRMADQAAREAAMKAVLET 161 (165)
T ss_dssp ----HSCCCSCCCSSHHHHHHHHHHTTSBSEEEEEECCSSCCSCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ----hcccCCCcccCHHHHHHHHHHHhcCCceEEEEecCCCCCCcCcchHHHHHHHHHHHHHhcCCCcc
Confidence 2223334555566555542 2568999999999999 9999999999999998876543
No 8
>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A
Probab=99.82 E-value=1.2e-21 Score=164.00 Aligned_cols=113 Identities=12% Similarity=0.002 Sum_probs=81.8
Q ss_pred CCeEEEEEcCCCCCCCCCCCceEEEEEec-CC------c-ch--------h---HHHHHHHHHHHHchhcCCCeEEE---
Q psy10246 140 VQCSWILSTQASSGCLLINSATGYAMSGY-QD------T-RL--------Y---SGAILVMKVLQSVQIFKIGKWLE--- 197 (287)
Q Consensus 140 ~~~i~IYTD~GS~~C~k~~G~vG~Avv~~-~~------~-~L--------~---AEL~AIl~ALe~a~~~~~sk~vI--- 197 (287)
++.+.|||| || |.+ |++|||++.. .+ . .+ . ||++|++.||+.+.+.+. ++.|
T Consensus 4 ~~~i~iytD-Gs--~~~--g~~G~G~vi~~~g~~~~~~~~~~~~~~~~~~tNn~aEl~A~~~AL~~a~~~~~-~v~I~tD 77 (147)
T 2kq2_A 4 RTEYDVYTD-GS--YVN--GQYAWAYAFVKDGKVHYEDADVGKNPAAATMRNVAGEIAAALYAVKKASQLGV-KIRILHD 77 (147)
T ss_dssp TSCCEEECC-CC--CBT--TBCEEEEEEEETTEEEEEEEEECCCGGGGGTCTTHHHHHHHHHHHHHHHHHTC-CCCBSSC
T ss_pred CCeEEEEEC-CC--CCC--CCcEEEEEEEECCEEEEEEeccccccccccccHHHHHHHHHHHHHHHHHHCCC-eEEEEEC
Confidence 356889999 99 765 8889995532 21 1 11 1 999999999998776544 4444
Q ss_pred ---EecccCCCcccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccchHHHHHHHHHHhhcccc
Q psy10246 198 ---ISVLGSPDVKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQLLK 261 (287)
Q Consensus 198 ---I~aL~n~~~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p~~~ 261 (287)
+..+....|+.+.+.+..++++++++.. +|.|.|||||+|++|||+||+|||+|+..+..+
T Consensus 78 S~~i~~w~~~~w~~~~~~~~~~~~l~~~l~~---~v~~~wV~gH~g~~~Ne~AD~LA~~a~~~~~~~ 141 (147)
T 2kq2_A 78 YAGIAFWATGEWKAKNEFTQAYAKLMNQYRG---IYSFEKVKAHSGNEFNDYVDMKAKSALGIRDLE 141 (147)
T ss_dssp CSTHHHHTTSSSSCCHHHHHHHHCGGGGGST---TCCBCCCCCCCCCHHHHHHHHHHHHHHTCCCTT
T ss_pred cHHHHHHHhCCCccCCcchHHHHHHHHHhcC---CeeEEEecCcCCCcchHHHHHHHHHHHhccccc
Confidence 1112222355555556777888887753 899999999999999999999999999876554
No 9
>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A
Probab=99.79 E-value=4.6e-20 Score=157.33 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=79.4
Q ss_pred eEEEEEcCCCCCCCCCCCceEEEEEec-CC------cchh------HHHHHHHHHHHHchhcCCCeEEE-------Eecc
Q psy10246 142 CSWILSTQASSGCLLINSATGYAMSGY-QD------TRLY------SGAILVMKVLQSVQIFKIGKWLE-------ISVL 201 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~Avv~~-~~------~~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I~aL 201 (287)
.+.|||| || |.+++|.+|||++.. .+ +.++ ||++|++.||+.+... .++.| +..+
T Consensus 8 ~i~iytD-Gs--~~~n~g~~G~G~v~~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~~--~~v~I~tDS~~vi~~i 82 (166)
T 1ril_A 8 RVALFTD-GA--CLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLKALKEP--CEVDLYTDSHYLKKAF 82 (166)
T ss_dssp CCCEEEE-EE--ESSTTEEEEEEEEECBTTBCCEECCEEEEECHHHHHHHHHHHHHHSCCSC--CEEEEECCCHHHHHHH
T ss_pred cEEEEEC-cc--ccCCCCCEEEEEEEEECCEEEEEecCCCCCcHHHHHHHHHHHHHHHhccC--CeEEEEeChHHHHHHH
Confidence 5789999 98 888889999997643 22 1111 9999999999988653 24444 2233
Q ss_pred cC-C-------CcccCCCChHHHHHHHHHHh--hCCCceEEEEeccCCCCccchHHHHHHHHHHhhcc
Q psy10246 202 GS-P-------DVKKVIFSPWSVRNVRAMKF--ARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQL 259 (287)
Q Consensus 202 ~n-~-------~~K~~~~~p~~I~~ii~eL~--~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p~ 259 (287)
.+ | .|+++.+.+..++++++++. .+...|.|.|||||+|++|||+||+|||+|+....
T Consensus 83 ~~~w~~~W~~~~w~~~~g~~v~n~~l~~~i~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LAk~a~~~~~ 150 (166)
T 1ril_A 83 TEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARRQAQSQA 150 (166)
T ss_dssp HSSHHHHHHHTTSBCTTSSBCTTHHHHHHHHHHHTTSEEECCCCCGGGSCTHHHHHHHHHHHHHTSSC
T ss_pred hhhHHHHHHhcccccccCCccCcHHHHHHHHHHHhcCeEEEEEeeCCCCchhHHHHHHHHHHHHHHhh
Confidence 33 2 24454444444444444332 13468999999999999999999999999998654
No 10
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=99.67 E-value=1.3e-16 Score=128.87 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=77.0
Q ss_pred eEEEEEcCCCCCCCCCCCceEEEEEec-CC-c--------chh------HHHHHHHHHHHHchhcCCCeEEE-------E
Q psy10246 142 CSWILSTQASSGCLLINSATGYAMSGY-QD-T--------RLY------SGAILVMKVLQSVQIFKIGKWLE-------I 198 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~Avv~~-~~-~--------~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I 198 (287)
.+.|||| || |.+++|.+|||++.. .+ + .++ ||++|++.||+.+.+.+..++.| +
T Consensus 3 ~~~iy~D-Gs--~~~~~g~~g~G~v~~~~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~v~i~tDS~~vv 79 (141)
T 3hst_B 3 KVVIEAD-GG--SRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVV 79 (141)
T ss_dssp EEEEEEE-EE--ESSSSEEEEEEEEEEETTSCSEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred EEEEEEe-cC--CCCCCCCcEEEEEEEeCCCCcEEEeeeccCCCCchHHHHHHHHHHHHHHHHHCCCceEEEEeChHHHH
Confidence 5789999 88 888899999996532 21 1 111 99999999999998877777766 3
Q ss_pred ecccCCCcccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccchHHHHHHHHHHhhc
Q psy10246 199 SVLGSPDVKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQ 258 (287)
Q Consensus 199 ~aL~n~~~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p 258 (287)
+.+.+ .|+......+.+.+.+.++..+...|.|.|||+ ++||.||+|||+|+...
T Consensus 80 ~~i~~-~~~~~~~~l~~~~~~i~~l~~~~~~v~~~~V~~----~~N~~AD~LA~~a~~~~ 134 (141)
T 3hst_B 80 EQMSG-RWKVKHPDLLKLYVQAQALASQFRRINYEWVPR----ARNTYADRLANDAMDAA 134 (141)
T ss_dssp HHHTT-SSCCCSHHHHHHHHHHHHHHTTSSEEEEEECCG----GGCHHHHHHHHHHHHHH
T ss_pred HHHhC-CcccCCHHHHHHHHHHHHHHhcCCeEEEEEcCC----cccHHHHHHHHHHHHHh
Confidence 34443 232222222333334445555568999999995 99999999999998764
No 11
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=99.67 E-value=1.3e-16 Score=128.06 Aligned_cols=109 Identities=15% Similarity=0.064 Sum_probs=75.3
Q ss_pred eEEEEEcCCCCCCCCCCCceEEEEEecC-Cc--------chh------HHHHHHHHHHHHchhcCCC----eEEE-----
Q psy10246 142 CSWILSTQASSGCLLINSATGYAMSGYQ-DT--------RLY------SGAILVMKVLQSVQIFKIG----KWLE----- 197 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~Avv~~~-~~--------~L~------AEL~AIl~ALe~a~~~~~s----k~vI----- 197 (287)
.+.|||| || |.+++|.+|||++... ++ .++ ||++|++.||+.+.+.+.. ++.|
T Consensus 3 ~~~iy~D-Gs--~~~n~g~~G~G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~~~~~~~~v~i~tDS~ 79 (140)
T 3u3g_D 3 KIIIYTD-GG--ARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSE 79 (140)
T ss_dssp EEEEEEE-EE--ESSTTEEEEEEEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGGGGGGTTCEEEEEESCH
T ss_pred eEEEEEe-cC--CCCCCCCcEEEEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeChH
Confidence 5889999 98 8888999999966433 21 111 9999999999999876555 6666
Q ss_pred --EecccCCCcccCCCChHHHHHHHHHH-hhCCCceEEEEeccCCCCccchHHHHHHHHHHhhc
Q psy10246 198 --ISVLGSPDVKKVIFSPWSVRNVRAMK-FARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQ 258 (287)
Q Consensus 198 --I~aL~n~~~K~~~~~p~~I~~ii~eL-~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p 258 (287)
++.+.++ |+......+.+.+.+.++ ..+...|.|.|||+ +|||.||+|||+|+...
T Consensus 80 ~vi~~i~~~-~~~~~~~l~~~~~~i~~l~~~~~~~v~~~~V~~----~~N~~AD~LA~~a~~~~ 138 (140)
T 3u3g_D 80 LIVRQMQGV-YKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPR----EKNARADELVNEAIDKA 138 (140)
T ss_dssp HHHHHHTTS-SCCCCGGGHHHHHHHHHHHHHHCTTCEEEECCG----GGGHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-cccCCHHHHHHHHHHHHHhhcCCCcEEEEEcCc----hhhHHHHHHHHHHHHhc
Confidence 3445542 222222233333334444 33445899999994 99999999999998753
No 12
>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B
Probab=99.65 E-value=1.8e-16 Score=156.57 Aligned_cols=107 Identities=17% Similarity=0.146 Sum_probs=75.3
Q ss_pred cCCCeEEEEEcCCCCCCCCCCCceEEEEEecCC-c---ch-----h-HHHHHHHHHHHHchhcCCCeEEE-------Eec
Q psy10246 138 NNVQCSWILSTQASSGCLLINSATGYAMSGYQD-T---RL-----Y-SGAILVMKVLQSVQIFKIGKWLE-------ISV 200 (287)
Q Consensus 138 ~~~~~i~IYTD~GS~~C~k~~G~vG~Avv~~~~-~---~L-----~-AEL~AIl~ALe~a~~~~~sk~vI-------I~a 200 (287)
.+.+.+.|||| || |.+++|.+|+|++...+ . .+ . ||++|++.||+. ...++.| +..
T Consensus 432 p~~~~~~iytD-Gs--~~~n~g~~g~G~v~~~~~~~~~~~~~~TNn~aEl~A~i~aL~~----~~~~v~I~tDS~~v~~~ 504 (555)
T 1mu2_A 432 PIPGAETFYTD-GS--CNRQSKEGKAGYVTDRGKDKVKKLEQTTNQQAELEAFAMALTD----SGPKVNIIVDSQYVMGI 504 (555)
T ss_dssp CCTTCEEEEEE-EE--ECTTTCCEEEEEEETTSCEEEEEESSCCHHHHHHHHHHHHHHT----SCSEEEEEESCHHHHHH
T ss_pred CCCCceEEEEc-cc--ccCCCCCceEEEEEEeCCEeeccCCCCCHHHHHHHHHHHHHHc----CCCeEEEEEehHHHHHH
Confidence 45667999999 88 88999989999765433 1 11 1 999999999998 3345555 345
Q ss_pred ccCCCcccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccchHHHHHHHHHH
Q psy10246 201 LGSPDVKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVENERVDQAAKNSI 255 (287)
Q Consensus 201 L~n~~~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa 255 (287)
+.+|. .....+ ..+++++.+. ++..|.|.|||||+|++|||+||+|||+|+
T Consensus 505 i~~~~--~~~~~~-l~~~~~~~~~-~~~~v~~~wV~~H~g~~~Ne~AD~LA~~a~ 555 (555)
T 1mu2_A 505 VASQP--TESESK-IVNQIIEEMI-KKEAIYVAWVPAHKGIGGNQEVDHLVSQGI 555 (555)
T ss_dssp HHTCC--SEESCH-HHHHHHHHHH-HCSEEEEEECCSSSCCTTHHHHHHHHHTTC
T ss_pred Hhccc--ccccHH-HHHHHHHHhc-cCCcEEEEEEECCCCChhHHHHHHHHHhhC
Confidence 66554 222112 2233444333 357899999999999999999999999874
No 13
>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...
Probab=99.64 E-value=1.3e-16 Score=157.77 Aligned_cols=108 Identities=15% Similarity=0.087 Sum_probs=75.2
Q ss_pred cccCCCeEEEEEcCCCCCCCCCCCceEEEEEecCCc--c--h------hHHHHHHHHHHHHchhcCCCeEEE-------E
Q psy10246 136 VENNVQCSWILSTQASSGCLLINSATGYAMSGYQDT--R--L------YSGAILVMKVLQSVQIFKIGKWLE-------I 198 (287)
Q Consensus 136 ~e~~~~~i~IYTD~GS~~C~k~~G~vG~Avv~~~~~--~--L------~AEL~AIl~ALe~a~~~~~sk~vI-------I 198 (287)
.+...+.+.|||| || |.+++|.+|+|++...+. . + .||++|++.||+.+ ..++.| +
T Consensus 433 ~ep~~~~~~iytD-Gs--~~~n~g~~g~g~v~~~~~~~~~~~~~~TNn~aEl~Ai~~aL~~~----~~~v~I~tDS~~vi 505 (557)
T 2zd1_A 433 KEPIVGAETFYVD-GA--ANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDS----GLEVNIVTDSQYAL 505 (557)
T ss_dssp SSCCTTSCEEEEE-EE--ECTTTCCEEEEEEETTSCEEEEEECSCCHHHHHHHHHHHHHHHS----CSEEEEEECCHHHH
T ss_pred cCCCCCCEEEEEc-cC--CCCCCCceEEEEEEECCcEEEecCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeChHHHH
Confidence 3445567999999 88 889999999997765431 1 1 19999999999998 234544 3
Q ss_pred ecccCCCcccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccchHHHHHHHHH
Q psy10246 199 SVLGSPDVKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVENERVDQAAKNS 254 (287)
Q Consensus 199 ~aL~n~~~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~A 254 (287)
+.+.+|..+.+. ...+++++.+.. ...|.|.|||||+|++|||+||+|||+|
T Consensus 506 ~~i~~~~~~~~~---~l~~~~~~~l~~-~~~v~~~wV~~H~g~~~Ne~AD~LA~~a 557 (557)
T 2zd1_A 506 GIIQAQPDKSES---ELVNQIIEQLIK-KEKVYLAWVPAHKGIGGNEQVDKLVSAG 557 (557)
T ss_dssp HHHTTCCSEESS---HHHHHHHHHHHH-CSEEEEEECCSSSCCTTCCGGGGCC---
T ss_pred HHHhcCCccCCH---HHHHHHHHHHhc-CCCEEEEEcCCCCCChhHHHHHHHHhcC
Confidence 456666533222 122344444433 3689999999999999999999999986
No 14
>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A
Probab=99.59 E-value=2.2e-15 Score=124.24 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=72.2
Q ss_pred EEEEEcCCCCCCC-CCCCceEE-EEEecCC-----------cch--h-----HHHHHHHHHHHHchhcCCCeEEE-----
Q psy10246 143 SWILSTQASSGCL-LINSATGY-AMSGYQD-----------TRL--Y-----SGAILVMKVLQSVQIFKIGKWLE----- 197 (287)
Q Consensus 143 i~IYTD~GS~~C~-k~~G~vG~-Avv~~~~-----------~~L--~-----AEL~AIl~ALe~a~~~~~sk~vI----- 197 (287)
+.|||| || |. +++|++|+ |++...+ +.+ . ||++|++.||+.+...+..++.|
T Consensus 2 ~~iy~D-Gs--~~~~n~g~~G~~G~vi~~~g~~~~~~~~~~~~~~~~~tnn~aEl~A~~~aL~~a~~~g~~~v~i~tDS~ 78 (149)
T 2ehg_A 2 IIGYFD-GL--CEPKNPGGIATFGFVIYLDNRKIEGYGLAEKPFSINSTNNVAEYSGLICLMETMLRLGISSPIIKGDSQ 78 (149)
T ss_dssp CEEEEE-EE--EESSSSSSEEEEEEEEECSSCEEEEEEECSCTTCTTCCHHHHHHHHHHHHHHHHHHHTCCSCEEEESCH
T ss_pred EEEEEe-ec--cCCCCCChheEEEEEEEECCEEEEEeccccCCCCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEEeChH
Confidence 579999 88 88 78899995 8543222 101 1 99999999999998876656655
Q ss_pred --EecccCCCcccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccchHHHHHHHHHHhhc
Q psy10246 198 --ISVLGSPDVKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVENERVDQAAKNSIYAQ 258 (287)
Q Consensus 198 --I~aL~n~~~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GNE~AD~LAK~Aa~~p 258 (287)
+..+.++ |+.+.+....+.+.+..+..+ ..|.|.|||+ ++||.||+|||+|+..+
T Consensus 79 ~vi~~i~~~-w~~~~~~~~~l~~~i~~l~~~-~~v~~~~V~~----~~N~~AD~LA~~a~~~~ 135 (149)
T 2ehg_A 79 LVIKQMNGE-YKVKAKRIIPLYEKAIELKKK-LNATLIWVPR----EENKEADRLSRVAYELV 135 (149)
T ss_dssp HHHHHHTTS-SCCCCTTHHHHHHHHHHHHHH-HTCEEEECCG----GGCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCc-cccCCHHHHHHHHHHHHHHhc-CCEEEEEcCC----cccHHHHHHHHHHHHhh
Confidence 3455554 343333222222222222222 2599999999 59999999999999764
No 15
>1zbf_A Ribonuclease H-related protein; RNAse H, RNA/DNA hybrid, DDE motif, hydrolase; 1.50A {Bacillus halodurans} SCOP: c.55.3.1 PDB: 1zbi_A 2g8u_A 2g8i_A 2g8h_A 2g8k_A 2g8f_A 2g8v_A 2g8w_A 3ey1_A* 1zbl_A 3d0p_A* 3i8d_A* 2r7y_A*
Probab=99.00 E-value=1.7e-11 Score=103.23 Aligned_cols=104 Identities=5% Similarity=-0.092 Sum_probs=72.9
Q ss_pred eEEEEEcCCCCCCCCCCCceEEEEEecCC-------cchh------HHHHHHHHHHHHchhcCCCeEEE-------Eecc
Q psy10246 142 CSWILSTQASSGCLLINSATGYAMSGYQD-------TRLY------SGAILVMKVLQSVQIFKIGKWLE-------ISVL 201 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~Avv~~~~-------~~L~------AEL~AIl~ALe~a~~~~~sk~vI-------I~aL 201 (287)
.+.|||| || |.+|+|++|||++...+ ..+. ||++|++.||+.+.+.+. ++.| ++++
T Consensus 11 ~~~iy~D-Ga--~~gNpG~~G~G~vl~~~g~~~~~~~~~~~~TNN~aEl~A~i~aL~~~~~~~~-~v~i~tDS~~vi~w~ 86 (142)
T 1zbf_A 11 WESLSVD-VG--SQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNS-RKPIYSNSQTAIKWV 86 (142)
T ss_dssp SSSEEEE-EE--ECSSSEEEEEEEEETTTCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHTTC-CCCEEESCHHHHHHH
T ss_pred eEEEEEe-ec--cCCCCCCeEEEEEEEeCCEEEEEecccCCcCcHHHHHHHHHHHHHHHHhCCC-eEEEEEehHHHHHHH
Confidence 4679999 88 89999999999765422 1121 999999999999987654 3333 3344
Q ss_pred cCCCcccCCCChHHHHHHHHHHhh-----CCCceEEEEeccCCCCccchHHHH
Q psy10246 202 GSPDVKKVIFSPWSVRNVRAMKFA-----RDINIKFLWIPSHCGIVENERVDQ 249 (287)
Q Consensus 202 ~n~~~K~~~~~p~~I~~ii~eL~~-----~g~~V~f~WVPGHsGI~GNE~AD~ 249 (287)
++..++++...++.++++++.+.+ +.+.++...|+-|++.-||+.||.
T Consensus 87 ~~~~~k~~~~~~v~n~dLw~~l~~~~~w~~~~~~~~~~~kw~~~~~ge~pad~ 139 (142)
T 1zbf_A 87 KDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY 139 (142)
T ss_dssp HHTCCCCCCCCSTTTHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCSCTTCC
T ss_pred HcCCccCCCCCCcccHHHHHHHHHHHHHHhhCCCceeEEEeccCccCcCcccc
Confidence 443334444456666666665432 346788888999999999999983
No 16
>4htu_A Ribonuclease H, RNAse H; 5-chloro-2'-deoxyuridine, W-C base PAIR, wobble base PAIR, D helix; HET: DNA UCL; 1.49A {Bacillus halodurans} PDB: 3d0p_A* 4hue_A* 4huf_A* 4hug_A* 1zbf_A 1zbi_A 2g8u_A 3uld_A* 3ey1_A* 3twh_A* 2g8f_A 2g8v_A 2g8w_A 2g8i_A 2g8h_A 2g8k_A 3i8d_A* 2r7y_A* 1zbl_A
Probab=98.88 E-value=3.4e-10 Score=95.10 Aligned_cols=79 Identities=5% Similarity=-0.059 Sum_probs=56.5
Q ss_pred eEEEEEcCCCCCCCCCCCceEEE-EEecCCc------chh------HHHHHHHHHHHHchhcC-------CCeEEEEecc
Q psy10246 142 CSWILSTQASSGCLLINSATGYA-MSGYQDT------RLY------SGAILVMKVLQSVQIFK-------IGKWLEISVL 201 (287)
Q Consensus 142 ~i~IYTD~GS~~C~k~~G~vG~A-vv~~~~~------~L~------AEL~AIl~ALe~a~~~~-------~sk~vII~aL 201 (287)
...|||| || |++|||++||| |+...+. .+. ||++|+++||+.+.+.+ ||+|+ ++++
T Consensus 5 ~~~iytD-Ga--c~GNPGp~G~ggV~~~~g~~~~~~g~~~~tTNN~aEl~A~i~aL~~l~~~~~~v~i~tDSqyV-i~wi 80 (134)
T 4htu_A 5 WESLSVD-VG--SQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTA-IKWV 80 (134)
T ss_dssp SSSEEEE-EE--EETTTEEEEEEEEETTTCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHTTCCCCEEESCHHH-HHHH
T ss_pred ceEEEEe-ec--cCCCCCCeEEEEEEEECCEEEEEecCCCCCchHHHHHHHHHHHHHHHHhCCCCEEEEcchHHH-HHHH
Confidence 4569999 88 99999999995 5433221 111 99999999999998753 23333 3567
Q ss_pred cCCCcccCCCChHHHHHHHHHHh
Q psy10246 202 GSPDVKKVIFSPWSVRNVRAMKF 224 (287)
Q Consensus 202 ~n~~~K~~~~~p~~I~~ii~eL~ 224 (287)
.++.|++....+++++++++++.
T Consensus 81 ~~~~~kt~~~~~vkN~dLw~~ld 103 (134)
T 4htu_A 81 KDKKAKSTLVRNEETALIWKLVD 103 (134)
T ss_dssp HHTCCCCCCCCSSTTHHHHHHHH
T ss_pred HcCCcccCCCCCccCHHHHHHHH
Confidence 77777777777877877776654
No 17
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=62.39 E-value=28 Score=34.47 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHchhcCCCeEEE---EecccCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 175 SGAILVMKVLQSVQIFKIGKWLE---ISVLGSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 175 AEL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+-+.||+.-|.++++.+.+-+-+ ..+-..+. .....+.....++++++++++|..|.+-+|+.|+|...
T Consensus 236 Gdl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h 315 (645)
T 4aef_A 236 GDLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFH 315 (645)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecccccccCC
Confidence 35789999999999887765444 22222322 01223456778999999999999999999999998765
Q ss_pred c
Q psy10246 244 N 244 (287)
Q Consensus 244 N 244 (287)
.
T Consensus 316 ~ 316 (645)
T 4aef_A 316 P 316 (645)
T ss_dssp H
T ss_pred c
Confidence 4
No 18
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=57.87 E-value=28 Score=34.12 Aligned_cols=69 Identities=12% Similarity=-0.036 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---EecccCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLGSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVEN 244 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GN 244 (287)
-+.+|+.-|.++++.+.+-+-+ ...-.+|.. ....+.....++++++++++|..|.+-||+.|++...-
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~ 250 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFF 250 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSH
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccH
Confidence 4567788888888877765544 222222220 12234467889999999999999999999999997553
No 19
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=57.28 E-value=45 Score=32.65 Aligned_cols=75 Identities=9% Similarity=0.006 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHchhcCCCeEEE---EecccCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 175 SGAILVMKVLQSVQIFKIGKWLE---ISVLGSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 175 AEL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+-+.+|+.-|.++++.+.+-+-+ ...-.+|.. ....+.....++++++++++|..|.+-||+.|++...
T Consensus 173 G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 252 (588)
T 1j0h_A 173 GDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEF 252 (588)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccc
Confidence 35678888899998877765544 222122220 1223346788999999999999999999999999766
Q ss_pred chHHHH
Q psy10246 244 NERVDQ 249 (287)
Q Consensus 244 NE~AD~ 249 (287)
..-.|.
T Consensus 253 ~~f~~~ 258 (588)
T 1j0h_A 253 APFQDV 258 (588)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 544443
No 20
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=56.18 E-value=22 Score=34.92 Aligned_cols=68 Identities=9% Similarity=0.037 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHchhcCCCeEEEEecc---cCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLEISVL---GSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vII~aL---~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
-+.+|+.-|.++++.+.+-+-+.-.. .+|.. ....+.....++++++++++|..|.+-||+.|++...
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 248 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTF 248 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTT
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCcc
Confidence 45678888899988777655542111 12210 1122346778999999999999999999999999754
No 21
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=50.47 E-value=31 Score=32.45 Aligned_cols=69 Identities=9% Similarity=-0.003 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHchhcCCCeEEEEeccc----CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLEISVLG----SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vII~aL~----n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
-+.+|+.-|.++++.+.+-+-+.-... .+. .....+.....++++++++++|.+|.+-+|+-|+|...
T Consensus 30 dl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~~ 109 (549)
T 4aie_A 30 DLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNHTSDQH 109 (549)
T ss_dssp CHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred CHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECccCCcCCc
Confidence 466888889999887776554411111 111 01123446778999999999999999999999999765
Q ss_pred c
Q psy10246 244 N 244 (287)
Q Consensus 244 N 244 (287)
.
T Consensus 110 ~ 110 (549)
T 4aie_A 110 K 110 (549)
T ss_dssp H
T ss_pred c
Confidence 4
No 22
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=44.09 E-value=50 Score=32.73 Aligned_cols=70 Identities=7% Similarity=-0.078 Sum_probs=48.4
Q ss_pred HHHHHHHHHHchhcCCCeEEE--Ee-c--ccCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 177 AILVMKVLQSVQIFKIGKWLE--IS-V--LGSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 177 L~AIl~ALe~a~~~~~sk~vI--I~-a--L~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+.+|+.-|.++++.+.+-+-+ +. . -.+|.. ....+.+...++++++++++|..|.+-+|+.|++..+
T Consensus 143 ~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~ 222 (602)
T 2bhu_A 143 YRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSG 222 (602)
T ss_dssp HHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSS
T ss_pred HHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccCC
Confidence 456777788888877655444 21 1 122220 1122346778999999999999999999999999887
Q ss_pred chH
Q psy10246 244 NER 246 (287)
Q Consensus 244 NE~ 246 (287)
|..
T Consensus 223 ~~~ 225 (602)
T 2bhu_A 223 NYL 225 (602)
T ss_dssp CCH
T ss_pred ccc
Confidence 754
No 23
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=41.56 E-value=71 Score=31.55 Aligned_cols=67 Identities=6% Similarity=-0.078 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHchh-cCCCeEEE---EecccCCC--------cccCCCChHHHHHHHHHHhhCC--C--ceEEEEeccCC
Q psy10246 176 GAILVMKVLQSVQI-FKIGKWLE---ISVLGSPD--------VKKVIFSPWSVRNVRAMKFARD--I--NIKFLWIPSHC 239 (287)
Q Consensus 176 EL~AIl~ALe~a~~-~~~sk~vI---I~aL~n~~--------~K~~~~~p~~I~~ii~eL~~~g--~--~V~f~WVPGHs 239 (287)
-+.+|+.-|.++++ .+.+-+-+ ...-.+|. .....+.....++++++++++| . .|.+-+|+.|+
T Consensus 189 ~~~gi~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~ 268 (637)
T 1ji1_A 189 DLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNHT 268 (637)
T ss_dssp CHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBC
T ss_pred CHHHHHHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcccC
Confidence 46788888999988 87765544 22222232 1122345778899999999999 9 99999999999
Q ss_pred CCc
Q psy10246 240 GIV 242 (287)
Q Consensus 240 GI~ 242 (287)
+..
T Consensus 269 ~~~ 271 (637)
T 1ji1_A 269 GDS 271 (637)
T ss_dssp CTT
T ss_pred CCC
Confidence 874
No 24
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=35.17 E-value=88 Score=30.28 Aligned_cols=67 Identities=10% Similarity=-0.082 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---Eeccc-CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLG-SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIV 242 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~-n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~ 242 (287)
-+.+|+.-|.+++..+.+-+-+ ..+-. .+. .....+.....++++++++.+|..|.+-+|+.|++..
T Consensus 30 dl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NHts~~ 108 (557)
T 1zja_A 30 DFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQ 108 (557)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 3568888888888877655544 11111 111 0112334677899999999999999999999999865
No 25
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=33.98 E-value=1.4e+02 Score=27.73 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=46.6
Q ss_pred HHHHHHHHHHchhcCCCeEEE---EecccCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccc
Q psy10246 177 AILVMKVLQSVQIFKIGKWLE---ISVLGSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVEN 244 (287)
Q Consensus 177 L~AIl~ALe~a~~~~~sk~vI---I~aL~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GN 244 (287)
+.+|+.-|.+++..+.+-+-+ ..+-..+. .....+.....++++++++++|.+|.+-+|+-|++..+.
T Consensus 22 ~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~ 100 (441)
T 1lwj_A 22 FRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHT 100 (441)
T ss_dssp HHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTTCH
T ss_pred HHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCchH
Confidence 567778888888877654444 11111111 011233467789999999999999999999999997653
No 26
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.00 E-value=93 Score=29.30 Aligned_cols=68 Identities=10% Similarity=0.015 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---EecccCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLGSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
-+.+|+.-|.++++.+.+-+-+ ...-.++.. ....+.....++++++++++|.+|.+-.|+-|++...
T Consensus 54 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~ 132 (488)
T 2wc7_A 54 DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGF 132 (488)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSS
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcC
Confidence 4678888999998877655444 221112210 0112235677899999999999999999999998764
No 27
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=32.83 E-value=86 Score=30.49 Aligned_cols=67 Identities=9% Similarity=-0.028 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---Eeccc-CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLG-SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIV 242 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~-n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~ 242 (287)
-+.+|+.-|.+++..+.+-+-+ ...-. .+. .....+.....++++.+++++|.+|.+-+|+.|++..
T Consensus 43 dl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~s~~ 121 (570)
T 1m53_A 43 DIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVINHTSDQ 121 (570)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 3567888888888877654444 11111 111 0112234677899999999999999999999999864
No 28
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=32.57 E-value=1.8e+02 Score=27.01 Aligned_cols=69 Identities=10% Similarity=0.002 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---EecccCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLGSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVEN 244 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GN 244 (287)
-+.+|..-|.++++.+.+-+-+ ...-.++. .....+.....++++++++++|.+|.+-+|+-|++....
T Consensus 48 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~ 127 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFF 127 (475)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSH
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCH
Confidence 4567888888888877655444 22111221 011223467789999999999999999999999996543
No 29
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=30.90 E-value=99 Score=30.80 Aligned_cols=69 Identities=7% Similarity=-0.045 Sum_probs=46.8
Q ss_pred HHHHHHHHHchhcCCCeEEE--Eec---ccCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCccc
Q psy10246 178 ILVMKVLQSVQIFKIGKWLE--ISV---LGSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVEN 244 (287)
Q Consensus 178 ~AIl~ALe~a~~~~~sk~vI--I~a---L~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~GN 244 (287)
.++..-|.++++.+.+-+-+ +.. -.+|. .....+.+...++++++++++|..|.+-+|+.|+|-.+|
T Consensus 154 ~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 233 (618)
T 3m07_A 154 RAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGN 233 (618)
T ss_dssp HHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC
T ss_pred HHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCCcc
Confidence 45556677777766655444 211 11221 012234567889999999999999999999999998877
Q ss_pred hH
Q psy10246 245 ER 246 (287)
Q Consensus 245 E~ 246 (287)
-.
T Consensus 234 ~~ 235 (618)
T 3m07_A 234 YL 235 (618)
T ss_dssp CH
T ss_pred cc
Confidence 65
No 30
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=28.85 E-value=1e+02 Score=30.09 Aligned_cols=69 Identities=13% Similarity=0.044 Sum_probs=45.0
Q ss_pred HHHHHHHHHHchhcCCCeEEE--Eecc---cCCCc--------ccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 177 AILVMKVLQSVQIFKIGKWLE--ISVL---GSPDV--------KKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 177 L~AIl~ALe~a~~~~~sk~vI--I~aL---~n~~~--------K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+.++..-|..+++.+.+-+-+ +... .+|.. ....+.+...++++++++++|..|.+-+|+.|++-.+
T Consensus 118 ~~~~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 197 (558)
T 3vgf_A 118 FEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEG 197 (558)
T ss_dssp HHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSSS
T ss_pred HHHHHHHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCCC
Confidence 345666677777766655444 2111 12210 1122335678999999999999999999999998766
Q ss_pred ch
Q psy10246 244 NE 245 (287)
Q Consensus 244 NE 245 (287)
|-
T Consensus 198 ~~ 199 (558)
T 3vgf_A 198 NY 199 (558)
T ss_dssp CC
T ss_pred Cc
Confidence 53
No 31
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=28.09 E-value=35 Score=31.32 Aligned_cols=32 Identities=13% Similarity=-0.151 Sum_probs=27.9
Q ss_pred CCChHHHHHHHHHHhhCCCceEEEEeccCCCC
Q psy10246 210 IFSPWSVRNVRAMKFARDINIKFLWIPSHCGI 241 (287)
Q Consensus 210 ~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI 241 (287)
.+.....++++++++++|.+|.+-+|+-|++.
T Consensus 73 ~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 104 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNNVGVRIYVDAVINHMCG 104 (496)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCSEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCcCCC
Confidence 34577889999999999999999999999753
No 32
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=28.07 E-value=50 Score=31.01 Aligned_cols=33 Identities=9% Similarity=0.086 Sum_probs=28.6
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+.....++++++++++|.+|.+-+|+.|++..+
T Consensus 95 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 127 (478)
T 2guy_A 95 GTADDLKALSSALHERGMYLMVDVVANHMGYDG 127 (478)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEB
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcccCCCCC
Confidence 346778999999999999999999999998644
No 33
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=27.75 E-value=1.4e+02 Score=29.33 Aligned_cols=68 Identities=6% Similarity=-0.089 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---Eeccc-CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLG-SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~-n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
-+.+|+.-|.+++..+.+-+-+ ...-. .+. .....+.....++++++++++|..|.+-+|+.|++...
T Consensus 38 dl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~ 117 (589)
T 3aj7_A 38 DMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEH 117 (589)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecccccccch
Confidence 3567788888888776655444 11111 111 01122346778999999999999999999999998653
No 34
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.65 E-value=70 Score=29.97 Aligned_cols=33 Identities=12% Similarity=-0.111 Sum_probs=28.6
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+.....++++++++++|.+|.+-+|+-|++..+
T Consensus 84 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 116 (435)
T 1mxg_A 84 GSKEELVRLIQTAHAYGIKVIADVVINHRAGGD 116 (435)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCCCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcccccCCC
Confidence 346778999999999999999999999998653
No 35
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=26.59 E-value=1.3e+02 Score=28.97 Aligned_cols=67 Identities=6% Similarity=-0.052 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---Eeccc-CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLG-SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIV 242 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~-n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~ 242 (287)
-+.+|+.-|.+++..+.+-+-+ ..+-. .+. .....+.....++++++++++|..|.+-+|+-|++..
T Consensus 29 d~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~~~~ 107 (555)
T 2ze0_A 29 DLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVINHTSDE 107 (555)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECSBCCTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccch
Confidence 4568888888888877655444 11111 111 0112234667899999999999999999999999864
No 36
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.93 E-value=54 Score=30.44 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 212 SPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 212 ~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
.....++++++++++|..|.+-+|+.|++-..
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 104 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFDY 104 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCCc
Confidence 35678999999999999999999999987654
No 37
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.55 E-value=1.7e+02 Score=29.21 Aligned_cols=70 Identities=11% Similarity=0.064 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHchhcCCCeEEE---EecccCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 175 SGAILVMKVLQSVQIFKIGKWLE---ISVLGSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 175 AEL~AIl~ALe~a~~~~~sk~vI---I~aL~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+-+.+|+.-|.++++.+.+-+-+ ..+-.++. .....+.....++++++++++|.+|.+-+|+-|++...
T Consensus 262 Gdl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~ 341 (696)
T 4aee_A 262 GDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCN 341 (696)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTS
T ss_pred cCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccccccCccC
Confidence 35778888899998877654444 12111111 01122346778999999999999999999999999765
Q ss_pred c
Q psy10246 244 N 244 (287)
Q Consensus 244 N 244 (287)
.
T Consensus 342 ~ 342 (696)
T 4aee_A 342 E 342 (696)
T ss_dssp H
T ss_pred H
Confidence 4
No 38
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=25.00 E-value=57 Score=32.82 Aligned_cols=30 Identities=7% Similarity=-0.056 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 214 WSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 214 ~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
.+.++++++++++|++|.+-+|+.|++..+
T Consensus 379 ~efk~LV~~aH~~GIkVIlDvV~NHts~~h 408 (884)
T 4aio_A 379 IEYRQMVQALNRIGLRVVMDVVYNHLDSSG 408 (884)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCSCCS
T ss_pred HHHHHHHHHHHhcCCceeeeeccccccCCC
Confidence 346889999999999999999999998654
No 39
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.25 E-value=52 Score=31.53 Aligned_cols=65 Identities=9% Similarity=-0.094 Sum_probs=43.4
Q ss_pred HHHHHHHHHHchhcCCCeEEE---Eecc--cCCC-----------------cccCCCChHHHHHHHHHHhhCCCceEEEE
Q psy10246 177 AILVMKVLQSVQIFKIGKWLE---ISVL--GSPD-----------------VKKVIFSPWSVRNVRAMKFARDINIKFLW 234 (287)
Q Consensus 177 L~AIl~ALe~a~~~~~sk~vI---I~aL--~n~~-----------------~K~~~~~p~~I~~ii~eL~~~g~~V~f~W 234 (287)
..+|+.-|.+++..+.+-+-+ .... ..+. .....+.....++++++++++|.+|.+-+
T Consensus 23 ~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 23 WTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 567777788888776554443 1111 0111 01123446778999999999999999999
Q ss_pred eccCCCC
Q psy10246 235 IPSHCGI 241 (287)
Q Consensus 235 VPGHsGI 241 (287)
|+-|++-
T Consensus 103 V~NH~~~ 109 (515)
T 1hvx_A 103 VFDHKGG 109 (515)
T ss_dssp CCSEECC
T ss_pred ecCCccC
Confidence 9999963
No 40
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=24.15 E-value=72 Score=29.46 Aligned_cols=67 Identities=3% Similarity=-0.060 Sum_probs=45.8
Q ss_pred HHHHHHHHHHchhcCCCeEEEE---ecccCCC--------cc-cCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 177 AILVMKVLQSVQIFKIGKWLEI---SVLGSPD--------VK-KVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 177 L~AIl~ALe~a~~~~~sk~vII---~aL~n~~--------~K-~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
+.+|..-|.++++.+.+-+-+. ..-..+. .. ...+.....++++++++++|.+|.+-+|+.|++..+
T Consensus 20 ~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 98 (405)
T 1ht6_A 20 YNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADY 98 (405)
T ss_dssp HHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcccCCC
Confidence 5677788888887766555441 1111111 11 223446778999999999999999999999998754
No 41
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.40 E-value=56 Score=30.80 Aligned_cols=31 Identities=10% Similarity=-0.125 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCCC
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCGI 241 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI 241 (287)
+.....++++++++++|.+|.+-+|+-|++-
T Consensus 80 Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~ 110 (485)
T 1wpc_A 80 GTRSQLQAAVTSLKNNGIQVYGDVVMNHKGG 110 (485)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeccccCC
Confidence 3467789999999999999999999999963
No 42
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=23.23 E-value=1.8e+02 Score=28.07 Aligned_cols=68 Identities=10% Similarity=-0.023 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHchhcCCCeEEE---Eeccc-CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCcc
Q psy10246 176 GAILVMKVLQSVQIFKIGKWLE---ISVLG-SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIVE 243 (287)
Q Consensus 176 EL~AIl~ALe~a~~~~~sk~vI---I~aL~-n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~G 243 (287)
-+.+|+.-|.+++..+.+-+-+ ...-. .+. .....+.....++++++++++|.+|.+-+|+-|++...
T Consensus 29 dl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s~~~ 108 (543)
T 2zic_A 29 DLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEH 108 (543)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCcccccc
Confidence 3567888888888777655544 11111 111 01112346678999999999999999999999998754
No 43
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=22.49 E-value=81 Score=29.67 Aligned_cols=31 Identities=6% Similarity=-0.055 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCCC
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCGI 241 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI 241 (287)
+.....++++++++++|.+|.+-+|+-|++-
T Consensus 76 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 106 (483)
T 3bh4_A 76 GTKSELQDAIGSLHSRNVQVYGDVVLNHKAG 106 (483)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcccC
Confidence 4467789999999999999999999999963
No 44
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=22.29 E-value=73 Score=31.49 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=42.5
Q ss_pred HHHHHHH-HHchhcCCCeEEE--E-eccc--CCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCc
Q psy10246 178 ILVMKVL-QSVQIFKIGKWLE--I-SVLG--SPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIV 242 (287)
Q Consensus 178 ~AIl~AL-e~a~~~~~sk~vI--I-~aL~--n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~ 242 (287)
.+|..-| .++++.+.+-+-+ + ..-. +|. .....+.+...++++++++++|..|.+-+|+.|++-.
T Consensus 155 ~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~ 233 (617)
T 1m7x_A 155 RELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTD 233 (617)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCc
Confidence 4555554 7877777655544 1 1111 122 0122344678899999999999999999999999643
No 45
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=22.24 E-value=61 Score=30.50 Aligned_cols=31 Identities=13% Similarity=-0.147 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCCC
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCGI 241 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI 241 (287)
+.....++++++++++|.+|.+-+|+-|++-
T Consensus 78 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 108 (480)
T 1ud2_A 78 GTKAQLERAIGSLKSNDINVYGDVVMNHKMG 108 (480)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcccc
Confidence 3467789999999999999999999999963
No 46
>1uw7_A NSP9; viral protein, replicase protein, RNA-binding; 2.8A {Sars coronavirus hku-39849} SCOP: b.140.1.1
Probab=22.05 E-value=21 Score=30.03 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=25.1
Q ss_pred cccccccccCccccccccccccccc---CCCcchheeeeeeeCC-CCCCC---ccccCCCC
Q psy10246 34 AFSWPRLAGHSRSACQFQNNEILEK---DSPVSAHRILFLLLNP-DCNDP---SFFLPDPG 87 (287)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~ 87 (287)
.--||+ ++|-...-+.|||||.-. ..+|.|- .+- .|+++ +||-+.-|
T Consensus 14 ~~~~~~-~~~~E~~~kLQNNEl~P~klk~~~v~a~------~D~~~c~~~~aka~Yn~~~G 67 (143)
T 1uw7_A 14 TSLYKK-AGFLEVLFQGPNNELSPVALRQMSCAAG------TTQTACTDDNALAYYNNSKG 67 (143)
T ss_dssp ---------CCEEEEEETTTEEEEEECEEEEECCB------SSSTTCCSCCEEEEEECCSS
T ss_pred cchhhh-hcccceeeeecccccccccceEEeeecc------cccccccCccceeeEEcCCC
Confidence 345775 789999999999999753 2232221 133 68887 55555544
No 47
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.78 E-value=82 Score=30.30 Aligned_cols=68 Identities=6% Similarity=-0.079 Sum_probs=47.4
Q ss_pred H-HHHHHHHHHchhcCCCeEEEEecc----------c---CCC-----cc--cCCCChHHHHHHHHHHhhCCCceEEEEe
Q psy10246 177 A-ILVMKVLQSVQIFKIGKWLEISVL----------G---SPD-----VK--KVIFSPWSVRNVRAMKFARDINIKFLWI 235 (287)
Q Consensus 177 L-~AIl~ALe~a~~~~~sk~vII~aL----------~---n~~-----~K--~~~~~p~~I~~ii~eL~~~g~~V~f~WV 235 (287)
+ .+|..-|.++++.+.+-+-+.-.. . .+. .. ...+.....++++++++++|.+|.+-+|
T Consensus 35 ~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 35 WYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6 899999999988776554441111 1 111 11 2223467789999999999999999999
Q ss_pred ccCCCCccc
Q psy10246 236 PSHCGIVEN 244 (287)
Q Consensus 236 PGHsGI~GN 244 (287)
+-|++....
T Consensus 115 ~NHt~~~~~ 123 (527)
T 1gcy_A 115 PNHMNRGYP 123 (527)
T ss_dssp CSBCCTTCS
T ss_pred ecCcCCCCC
Confidence 999987654
No 48
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=21.17 E-value=83 Score=32.32 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=43.8
Q ss_pred HHHHHHHH-HHchhcCCCeEEE--E-ecc--cCCC--------cccCCCChHHHHHHHHHHhhCCCceEEEEeccCCCCc
Q psy10246 177 AILVMKVL-QSVQIFKIGKWLE--I-SVL--GSPD--------VKKVIFSPWSVRNVRAMKFARDINIKFLWIPSHCGIV 242 (287)
Q Consensus 177 L~AIl~AL-e~a~~~~~sk~vI--I-~aL--~n~~--------~K~~~~~p~~I~~ii~eL~~~g~~V~f~WVPGHsGI~ 242 (287)
..++...| .++++.+.+-+-+ + ..- .+|. .....+.+...+.++++++++|..|.+-||+.|++..
T Consensus 262 ~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~ 341 (722)
T 3k1d_A 262 YRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKD 341 (722)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCc
Confidence 44555555 7777776655444 1 111 1121 0122345678899999999999999999999998765
Q ss_pred c
Q psy10246 243 E 243 (287)
Q Consensus 243 G 243 (287)
+
T Consensus 342 ~ 342 (722)
T 3k1d_A 342 A 342 (722)
T ss_dssp T
T ss_pred c
Confidence 3
No 49
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=20.69 E-value=62 Score=34.02 Aligned_cols=30 Identities=10% Similarity=0.143 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHHhhCCCceEEEEeccCCC
Q psy10246 211 FSPWSVRNVRAMKFARDINIKFLWIPSHCG 240 (287)
Q Consensus 211 ~~p~~I~~ii~eL~~~g~~V~f~WVPGHsG 240 (287)
+.....++++.+++++|..|.+-||+.|++
T Consensus 690 Gt~~df~~lv~~~H~~GI~VilD~V~NH~~ 719 (844)
T 3aie_A 690 GTADDLVKAIKALHSKGIKVMADWVPDQMY 719 (844)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 346778999999999999999999999985
Done!