Your job contains 1 sequence.
>psy10248
MGLQLLSRSLDPYYFKYGTSTSDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDL
PFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIED
KCYVLTYREYCRYRKKMRSIEDNVVNFKIIVPPLGEGQYERLLRQPPGQVSPDRVFYCHK
VYDFRTKRLLKNPC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10248
(194 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0052529 - symbol:Hers "Histone gene-specific Epige... 532 1.7e-49 1
UNIPROTKB|F1NFN2 - symbol:BAHD1 "Uncharacterized protein"... 458 2.2e-43 1
UNIPROTKB|F1PKB9 - symbol:BAHD1 "Uncharacterized protein"... 435 3.3e-40 1
MGI|MGI:2139371 - symbol:Bahd1 "bromo adjacent homology d... 426 3.1e-39 1
RGD|1563127 - symbol:Bahd1 "bromo adjacent homology domai... 426 3.1e-39 1
UNIPROTKB|F1SSR6 - symbol:BAHD1 "Uncharacterized protein"... 426 3.2e-39 1
UNIPROTKB|Q8TBE0 - symbol:BAHD1 "Bromo adjacent homology ... 426 3.2e-39 1
UNIPROTKB|F1MSG4 - symbol:BAHD1 "Uncharacterized protein"... 423 6.8e-39 1
MGI|MGI:2679272 - symbol:Bahcc1 "BAH domain and coiled-co... 151 1.4e-09 2
UNIPROTKB|F1M074 - symbol:F1M074 "Uncharacterized protein... 151 2.0e-09 1
UNIPROTKB|I3LCT7 - symbol:BAHCC1 "Uncharacterized protein... 151 5.3e-09 1
UNIPROTKB|I3L5Y2 - symbol:BAHCC1 "Uncharacterized protein... 151 5.3e-09 1
UNIPROTKB|I3L2T4 - symbol:BAHCC1 "BAH and coiled-coil dom... 150 6.5e-09 1
UNIPROTKB|F8WBW8 - symbol:BAHCC1 "BAH and coiled-coil dom... 150 6.8e-09 1
UNIPROTKB|Q9P281 - symbol:BAHCC1 "BAH and coiled-coil dom... 150 6.8e-09 1
UNIPROTKB|F1MM81 - symbol:F1MM81 "Uncharacterized protein... 149 7.9e-09 1
TAIR|locus:2120693 - symbol:EBS "EARLY BOLTING IN SHORT D... 139 9.3e-09 1
UNIPROTKB|J9P091 - symbol:BAHCC1 "Uncharacterized protein... 148 9.7e-09 1
UNIPROTKB|F1PQM0 - symbol:BAHCC1 "Uncharacterized protein... 148 1.1e-08 1
TAIR|locus:2120252 - symbol:SHL1 "short life" species:370... 130 3.2e-07 1
POMBASE|SPBC4B4.03 - symbol:rsc1 "RSC complex subunit Rsc... 133 3.2e-07 2
TAIR|locus:2137256 - symbol:AT4G04260 species:3702 "Arabi... 115 2.0e-05 1
FB|FBgn0051151 - symbol:wge "winged eye" species:7227 "Dr... 122 0.00011 1
SGD|S000004349 - symbol:RSC2 "Component of the RSC chroma... 118 0.00017 1
RGD|1307540 - symbol:Tnrc18 "trinucleotide repeat contain... 120 0.00035 1
>FB|FBgn0052529 [details] [associations]
symbol:Hers "Histone gene-specific Epigenetic Repressor in
late S phase" species:7227 "Drosophila melanogaster" [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0006338 "chromatin remodeling" evidence=IGI;IMP;IPI]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IDA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:AE014298 GO:GO:0006338 GO:GO:0006342
GO:GO:0000976 GO:GO:0007476 GeneTree:ENSGT00390000003967
GeneID:33000 KEGG:dme:Dmel_CG32529 FlyBase:FBgn0052529
GenomeRNAi:33000 NextBio:781443 HSSP:P48606 RefSeq:NP_001245771.1
RefSeq:NP_608360.2 ProteinModelPortal:Q9VWC0 IntAct:Q9VWC0
EnsemblMetazoa:FBtr0074800 EnsemblMetazoa:FBtr0306520
EnsemblMetazoa:FBtr0332993 UCSC:CG32529-RA InParanoid:Q9VWC0
OMA:GLHTEHA PhylomeDB:Q9VWC0 ArrayExpress:Q9VWC0 Bgee:Q9VWC0
Uniprot:Q9VWC0
Length = 2529
Score = 532 (192.3 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 96/174 (55%), Positives = 129/174 (74%)
Query: 22 SDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVS 81
SD+ V+R CYPAMRH++GDII+ RDC+LLK+ +LP++AKV LW+NPEDGEMM+S
Sbjct: 2348 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKAN-EDNELPYVAKVAHLWQNPEDGEMMMS 2406
Query: 82 LLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIE 141
LLWYYRPEHT+QG D DE++ASRHRD NSVAC+EDKCYVLT+ EYCRYR+++R+ E
Sbjct: 2407 LLWYYRPEHTDQGRQRNDCPDEVYASRHRDHNSVACVEDKCYVLTFSEYCRYRRRLRAAE 2466
Query: 142 DNVVNFKIIV--PPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
++V + I+ P + + R P +P+ V +C + Y+FRT+RLLK P
Sbjct: 2467 EDVEDVSIVPRRPSIATAPGFPV-RTVPEHTNPELVMFCRRAYEFRTRRLLKLP 2519
>UNIPROTKB|F1NFN2 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005677 "chromatin silencing
complex" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001025 Pfam:PF01426
PROSITE:PS51038 SMART:SM00439 GO:GO:0045892 GO:GO:0003677
GO:GO:0003682 GO:GO:0005677 GO:GO:0031507
GeneTree:ENSGT00390000003967 EMBL:AADN02040035 EMBL:AADN02040036
EMBL:AADN02040037 EMBL:AADN02040038 EMBL:AADN02040039
IPI:IPI00582870 Ensembl:ENSGALT00000007423 OMA:HQNEIFA
Uniprot:F1NFN2
Length = 473
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 87/172 (50%), Positives = 117/172 (68%)
Query: 22 SDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVS 81
++ P VR Y A+ G+II+ RD +LLKSG RKK +P++AK+ ALWE+P+ GE+M+S
Sbjct: 302 NEPEPAVRKSYQAVER-DGEIIRVRDTVLLKSGPRKKSMPYVAKISALWEDPKTGELMMS 360
Query: 82 LLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIE 141
LLWYYRPEHT+ G + +++EIFASRH+D NSVACIE+KCYVLT+ EYCR+ +
Sbjct: 361 LLWYYRPEHTQGGRNPSMHQNEIFASRHQDENSVACIEEKCYVLTFAEYCRFCALAKRRV 420
Query: 142 DNVVNFKIIVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + K I+ P E L R+ P P+ VF C VYDFR R+LKNP
Sbjct: 421 EGIPGRKAIMVPPSEEYSTPLHRKVPEDTDPELVFLCRHVYDFRHGRILKNP 472
>UNIPROTKB|F1PKB9 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0045892 GO:GO:0003677 GO:GO:0003682 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:AAEX03016066
Ensembl:ENSCAFT00000014534 Uniprot:F1PKB9
Length = 776
Score = 435 (158.2 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 88/174 (50%), Positives = 115/174 (66%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 605 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 662
Query: 81 SLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSI 140
SLLWYYRPEH + G S +++E+FASRH+D NSVACIE+KCYVLT+ EYCR+ +
Sbjct: 663 SLLWYYRPEHLQGGRSPSMHENEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMAKRR 722
Query: 141 EDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 723 GEGLPSRKTALVPPSADYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 775
>MGI|MGI:2139371 [details] [associations]
symbol:Bahd1 "bromo adjacent homology domain containing 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 MGI:MGI:2139371 GO:GO:0045892 GO:GO:0005694
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 EMBL:CH466519 CTD:22893
eggNOG:NOG299910 HOVERGEN:HBG106654 OrthoDB:EOG4NS3B0 GO:GO:0005677
GO:GO:0031507 EMBL:AK129243 EMBL:AL845164 EMBL:BC047433
EMBL:BC100358 EMBL:BC141046 EMBL:BC145233 IPI:IPI00420548
IPI:IPI00857199 RefSeq:NP_001038988.1 UniGene:Mm.330487
ProteinModelPortal:Q497V6 SMR:Q497V6 STRING:Q497V6
PhosphoSite:Q497V6 PRIDE:Q497V6 Ensembl:ENSMUST00000036578
Ensembl:ENSMUST00000151162 GeneID:228536 KEGG:mmu:228536
UCSC:uc008lsw.1 UCSC:uc012cbm.1 GeneTree:ENSGT00390000003967
InParanoid:B2RUB2 NextBio:379020 Bgee:Q497V6 CleanEx:MM_BAHD1
Genevestigator:Q497V6 Uniprot:Q497V6
Length = 772
Score = 426 (155.0 bits), Expect = 3.1e-39, P = 3.1e-39
Identities = 88/177 (49%), Positives = 115/177 (64%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 598 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 655
Query: 81 SLLWYYRPEHTEQGTS---YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKM 137
SLLWYYRPEH + G S + ++E+FASRH+D NSVACIE+KCYVLT+ EYCR+
Sbjct: 656 SLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMA 715
Query: 138 RSIEDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 716 KRRGEGLPSRKTALVPPSADYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 771
>RGD|1563127 [details] [associations]
symbol:Bahd1 "bromo adjacent homology domain containing 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=IEA;ISO]
[GO:0031507 "heterochromatin assembly" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 RGD:1563127 GO:GO:0045892 GO:GO:0003677 GO:GO:0003682
CTD:22893 OMA:RACPQSA OrthoDB:EOG4NS3B0 GO:GO:0005677 GO:GO:0031507
GeneTree:ENSGT00390000003967 EMBL:CH473949 IPI:IPI00369875
RefSeq:XP_001080776.3 RefSeq:XP_347036.5 Ensembl:ENSRNOT00000013878
GeneID:362194 KEGG:rno:362194 UCSC:RGD:1563127 NextBio:678978
Uniprot:D3ZHT3
Length = 772
Score = 426 (155.0 bits), Expect = 3.1e-39, P = 3.1e-39
Identities = 88/177 (49%), Positives = 115/177 (64%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 598 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 655
Query: 81 SLLWYYRPEHTEQGTS---YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKM 137
SLLWYYRPEH + G S + ++E+FASRH+D NSVACIE+KCYVLT+ EYCR+
Sbjct: 656 SLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMA 715
Query: 138 RSIEDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 716 KRRGEGLPSRKTALVPPSADYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 771
>UNIPROTKB|F1SSR6 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0045892
GO:GO:0003677 GO:GO:0003682 CTD:22893 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:CU234165
RefSeq:XP_003353440.1 Ensembl:ENSSSCT00000005271 GeneID:100155635
KEGG:ssc:100155635 Uniprot:F1SSR6
Length = 778
Score = 426 (155.0 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 88/177 (49%), Positives = 115/177 (64%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 604 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 661
Query: 81 SLLWYYRPEHTEQGTS---YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKM 137
SLLWYYRPEH + G S + ++E+FASRH+D NSVACIE+KCYVLT+ EYCR+
Sbjct: 662 SLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMA 721
Query: 138 RSIEDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 722 KRRGEGLPSRKTALVPPSADYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 777
>UNIPROTKB|Q8TBE0 [details] [associations]
symbol:BAHD1 "Bromo adjacent homology domain-containing 1
protein" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0031507 "heterochromatin assembly" evidence=IMP]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0045892 GO:GO:0005694 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 EMBL:AB023162 EMBL:BC022782 EMBL:AC013356
EMBL:AL833923 IPI:IPI00465088 IPI:IPI00797500 IPI:IPI00848287
RefSeq:NP_055767.3 UniGene:Hs.22109 ProteinModelPortal:Q8TBE0
SMR:Q8TBE0 IntAct:Q8TBE0 MINT:MINT-1463761 STRING:Q8TBE0
PhosphoSite:Q8TBE0 DMDM:152040006 PaxDb:Q8TBE0 PRIDE:Q8TBE0
DNASU:22893 Ensembl:ENST00000416165 Ensembl:ENST00000560846
Ensembl:ENST00000561234 GeneID:22893 KEGG:hsa:22893 UCSC:uc001zlt.2
UCSC:uc001zlu.2 UCSC:uc001zlv.2 CTD:22893 GeneCards:GC15P040733
H-InvDB:HIX0012131 HGNC:HGNC:29153 HPA:HPA040461 HPA:HPA041196
MIM:613880 neXtProt:NX_Q8TBE0 PharmGKB:PA128394592 eggNOG:NOG299910
HOGENOM:HOG000095173 HOVERGEN:HBG106654 InParanoid:Q8TBE0
OMA:RACPQSA OrthoDB:EOG4NS3B0 PhylomeDB:Q8TBE0 GenomeRNAi:22893
NextBio:43507 Bgee:Q8TBE0 CleanEx:HS_BAHD1 Genevestigator:Q8TBE0
GO:GO:0005677 GO:GO:0031507 Uniprot:Q8TBE0
Length = 780
Score = 426 (155.0 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 88/177 (49%), Positives = 115/177 (64%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 606 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 663
Query: 81 SLLWYYRPEHTEQGTS---YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKM 137
SLLWYYRPEH + G S + ++E+FASRH+D NSVACIE+KCYVLT+ EYCR+
Sbjct: 664 SLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMA 723
Query: 138 RSIEDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 724 KRRGEGLPSRKTALVPPSADYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 779
>UNIPROTKB|F1MSG4 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0045892
GO:GO:0003677 GO:GO:0003682 CTD:22893 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:DAAA02028546
IPI:IPI00688462 RefSeq:NP_001193211.1 UniGene:Bt.21388
Ensembl:ENSBTAT00000005794 GeneID:617684 KEGG:bta:617684
NextBio:20900790 Uniprot:F1MSG4
Length = 779
Score = 423 (154.0 bits), Expect = 6.8e-39, P = 6.8e-39
Identities = 88/177 (49%), Positives = 115/177 (64%)
Query: 23 DE-HPVVRNCYPAM-RHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMV 80
DE P +R Y A+ RH G+ I+ RD +LLKSG RK P++AK+ ALWENPE GE+M+
Sbjct: 605 DEPEPAIRKSYQAVERH--GETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMM 662
Query: 81 SLLWYYRPEHTEQGTS---YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKM 137
SLLWYYRPEH + G S + ++E+FASRH+D NSVACIE+KCYVLT+ EYCR+
Sbjct: 663 SLLWYYRPEHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMA 722
Query: 138 RSIEDNVVNFKI-IVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNP 193
+ + + + K +VPP + R P P+ VF C VYDFR R+LKNP
Sbjct: 723 KRRGEGLPSRKTALVPPSVDYSTPPH-RTVPEDTDPELVFLCRHVYDFRHGRILKNP 778
>MGI|MGI:2679272 [details] [associations]
symbol:Bahcc1 "BAH domain and coiled-coil containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 MGI:MGI:2679272 GO:GO:0005525 GO:GO:0003677
GO:GO:0003924 GO:GO:0006184 CTD:57597 eggNOG:NOG77890
HOVERGEN:HBG107492 OrthoDB:EOG4R23SX EMBL:AB257855 EMBL:AB257860
EMBL:AK147250 EMBL:AK147400 EMBL:AK164229 EMBL:AL928567
EMBL:BC044873 EMBL:BC057623 EMBL:BC060615 EMBL:BC072602
IPI:IPI00396779 RefSeq:NP_940815.3 UniGene:Mm.309498
ProteinModelPortal:Q3UHR0 SMR:Q3UHR0 PhosphoSite:Q3UHR0
PRIDE:Q3UHR0 Ensembl:ENSMUST00000118987 Ensembl:ENSMUST00000122148
GeneID:268515 KEGG:mmu:268515 UCSC:uc007msd.2
GeneTree:ENSGT00530000063602 OMA:LDHHGNS NextBio:392357 Bgee:Q3UHR0
CleanEx:MM_BAHCC1 Genevestigator:Q3UHR0 Uniprot:Q3UHR0
Length = 2643
Score = 151 (58.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ +LWE+ M+V + W+Y PE T+ G D K+ ++
Sbjct: 2523 DCAVFLSAGRP-NLPYIGRIESLWES-WGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQ 2580
Query: 107 SRHRDINSVACIEDKCYVLTYREYCRYRKKMR 138
S H D N V I KC V+ RE +Y + MR
Sbjct: 2581 SCHEDENDVQTISHKCQVVG-RE--QYEQMMR 2609
Score = 35 (17.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 18 GTSTSDEHPVVRNCYPAMRHI 38
G ++S P R +PA I
Sbjct: 92 GPTSSPSEPAYRGSHPATSQI 112
>UNIPROTKB|F1M074 [details] [associations]
symbol:F1M074 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 IPI:IPI00764269 Ensembl:ENSRNOT00000054977
Uniprot:F1M074
Length = 1123
Score = 151 (58.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ +LWE+ M+V + W+Y PE T+ G D K+ ++
Sbjct: 1003 DCAVFLSAGRP-NLPYIGRIESLWES-WGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQ 1060
Query: 107 SRHRDINSVACIEDKCYVLTYREYCRYRKKMR 138
S H D N V I KC V+ RE +Y + MR
Sbjct: 1061 SCHEDENDVQTISHKCQVVG-RE--QYEQMMR 1089
>UNIPROTKB|I3LCT7 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 EMBL:FP340396
Ensembl:ENSSSCT00000027597 Uniprot:I3LCT7
Length = 2599
Score = 151 (58.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T G + D K+ ++
Sbjct: 2479 DCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETRLGKRHSDGKNALYQ 2536
Query: 107 SRHRDINSVACIEDKCYVL---TYREYCRYRK 135
S H D N V I KC V+ Y + R RK
Sbjct: 2537 SCHEDENDVQTISHKCQVVGREQYEQMTRSRK 2568
>UNIPROTKB|I3L5Y2 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 OMA:LDHHGNS EMBL:FP340396
Ensembl:ENSSSCT00000023942 Uniprot:I3L5Y2
Length = 2619
Score = 151 (58.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T G + D K+ ++
Sbjct: 2499 DCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETRLGKRHSDGKNALYQ 2556
Query: 107 SRHRDINSVACIEDKCYVL---TYREYCRYRK 135
S H D N V I KC V+ Y + R RK
Sbjct: 2557 SCHEDENDVQTISHKCQVVGREQYEQMTRSRK 2588
>UNIPROTKB|I3L2T4 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
HGNC:HGNC:29279 ChiTaRS:BAHCC1 Ensembl:ENST00000571813
Uniprot:I3L2T4
Length = 2520
Score = 150 (57.9 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 38 IQGD-IIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTS 96
++G+ ++ DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G
Sbjct: 2390 VRGEETLRVGDCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETKLGKR 2447
Query: 97 YRDNKDEIFASRHRDINSVACIEDKCYVLT---YREYCRYRK 135
D K+ ++ S H D N V I KC V+ Y + R RK
Sbjct: 2448 QCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRK 2489
>UNIPROTKB|F8WBW8 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
IPI:IPI00845508 HGNC:HGNC:29279 ChiTaRS:BAHCC1 OMA:LDHHGNS
ProteinModelPortal:F8WBW8 Ensembl:ENST00000307745 UCSC:uc002kae.2
Bgee:F8WBW8 Uniprot:F8WBW8
Length = 2608
Score = 150 (57.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 38 IQGD-IIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTS 96
++G+ ++ DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G
Sbjct: 2478 VRGEETLRVGDCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETKLGKR 2535
Query: 97 YRDNKDEIFASRHRDINSVACIEDKCYVLT---YREYCRYRK 135
D K+ ++ S H D N V I KC V+ Y + R RK
Sbjct: 2536 QCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRK 2577
>UNIPROTKB|Q9P281 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
EMBL:AADB02019016 EMBL:AB040880 EMBL:BC033222 IPI:IPI00845508
RefSeq:NP_001073988.2 UniGene:Hs.514580 ProteinModelPortal:Q9P281
SMR:Q9P281 IntAct:Q9P281 PhosphoSite:Q9P281 DMDM:205371795
PaxDb:Q9P281 PRIDE:Q9P281 GeneID:57597 KEGG:hsa:57597
UCSC:uc002kaf.2 CTD:57597 GeneCards:GC17P079373 H-InvDB:HIX0014249
HGNC:HGNC:29279 HPA:HPA023386 neXtProt:NX_Q9P281
PharmGKB:PA128394719 eggNOG:NOG77890 HOGENOM:HOG000095172
HOVERGEN:HBG107492 OrthoDB:EOG4R23SX ChiTaRS:BAHCC1
GenomeRNAi:57597 NextBio:64206 CleanEx:HS_BAHCC1
Genevestigator:Q9P281 Uniprot:Q9P281
Length = 2608
Score = 150 (57.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 38 IQGD-IIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTS 96
++G+ ++ DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G
Sbjct: 2478 VRGEETLRVGDCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETKLGKR 2535
Query: 97 YRDNKDEIFASRHRDINSVACIEDKCYVLT---YREYCRYRK 135
D K+ ++ S H D N V I KC V+ Y + R RK
Sbjct: 2536 QCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRK 2577
>UNIPROTKB|F1MM81 [details] [associations]
symbol:F1MM81 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 OMA:LDHHGNS EMBL:DAAA02049425
EMBL:DAAA02049426 EMBL:DAAA02049427 EMBL:DAAA02049428
EMBL:DAAA02049429 IPI:IPI00685286 Ensembl:ENSBTAT00000022317
Uniprot:F1MM81
Length = 2399
Score = 149 (57.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G D K+ ++
Sbjct: 2279 DCAVFLSAGRP-NLPYIGRIESMWES-WGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQ 2336
Query: 107 SRHRDINSVACIEDKCYVL---TYREYCRYRK 135
S H D N V I KC V+ Y + R RK
Sbjct: 2337 SCHEDENDVQTISHKCQVVGREQYEQMTRSRK 2368
>TAIR|locus:2120693 [details] [associations]
symbol:EBS "EARLY BOLTING IN SHORT DAYS" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426 PROSITE:PS50016
PROSITE:PS51038 SMART:SM00249 SMART:SM00439 EMBL:CP002687
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0009845
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0009911 InterPro:IPR019786 PROSITE:PS01359
IPI:IPI00541104 RefSeq:NP_193945.2 UniGene:At.49737
ProteinModelPortal:F4JL28 SMR:F4JL28 PRIDE:F4JL28
EnsemblPlants:AT4G22140.1 GeneID:828303 KEGG:ath:AT4G22140
OMA:NQPYVAR Uniprot:F4JL28
Length = 234
Score = 139 (54.0 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 42 IIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNK 101
+++ DC+L++ K P++A+V + E + V WYYRPE + G
Sbjct: 30 VVRAGDCVLMRPSDAGKP-PYVARVEKI-EADARNNVKVHCRWYYRPEESLGGRRQFHGA 87
Query: 102 DEIFASRHRDINSVACIEDKCYVLTYREYCR 132
E+F S H D+ S IE KC V T++ Y R
Sbjct: 88 KELFLSDHFDVQSAHTIEGKCIVHTFKNYTR 118
>UNIPROTKB|J9P091 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 EMBL:AAEX03006175
EMBL:AAEX03006176 EMBL:AAEX03006177 Ensembl:ENSCAFT00000048729
Uniprot:J9P091
Length = 2322
Score = 148 (57.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G D K+ ++
Sbjct: 2202 DCAVFLSAGRP-NLPYIGRIESMWESWASN-MVVKVKWFYHPEETKLGKRQSDGKNALYQ 2259
Query: 107 SRHRDINSVACIEDKCYVL---TYREYCRYRK 135
S H D N V I KC V+ Y + R RK
Sbjct: 2260 SCHEDENDVQTISHKCQVVGREQYEQMTRSRK 2291
>UNIPROTKB|F1PQM0 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 OMA:LDHHGNS
EMBL:AAEX03006175 EMBL:AAEX03006176 EMBL:AAEX03006177
Ensembl:ENSCAFT00000009236 Uniprot:F1PQM0
Length = 2533
Score = 148 (57.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 47 DCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFA 106
DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T+ G D K+ ++
Sbjct: 2413 DCAVFLSAGRP-NLPYIGRIESMWESWASN-MVVKVKWFYHPEETKLGKRQSDGKNALYQ 2470
Query: 107 SRHRDINSVACIEDKCYVL---TYREYCRYRK 135
S H D N V I KC V+ Y + R RK
Sbjct: 2471 SCHEDENDVQTISHKCQVVGREQYEQMTRSRK 2502
>TAIR|locus:2120252 [details] [associations]
symbol:SHL1 "short life" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006972
"hyperosmotic response" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009266 "response to temperature
stimulus" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001025
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00439
GO:GO:0005634 EMBL:CP002687 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0009791 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AF277453 EMBL:AY050934
EMBL:AY079396 IPI:IPI00526215 RefSeq:NP_568053.1 UniGene:At.47993
UniGene:At.70103 ProteinModelPortal:Q9FEN9 SMR:Q9FEN9 IntAct:Q9FEN9
STRING:Q9FEN9 PRIDE:Q9FEN9 EnsemblPlants:AT4G39100.1 GeneID:830065
KEGG:ath:AT4G39100 TAIR:At4g39100 InParanoid:Q9FEN9 OMA:YDVQSAD
PhylomeDB:Q9FEN9 ProtClustDB:CLSN2689831 Genevestigator:Q9FEN9
Uniprot:Q9FEN9
Length = 228
Score = 130 (50.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 35 MRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQG 94
++HI I Q D +L++S K ++A+V A+ + V + WYYRPE + G
Sbjct: 16 LKHINKSI-QEGDAVLMRSSEPGKP-SYVARVEAIETDARGSHAKVRVRWYYRPEESIGG 73
Query: 95 TSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCR 132
E+F S H D S IE KC V ++ Y +
Sbjct: 74 RRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTK 111
>POMBASE|SPBC4B4.03 [details] [associations]
symbol:rsc1 "RSC complex subunit Rsc1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0016586 "RSC
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:1900388 "regulation of vesicle-mediated transport by regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 PomBase:SPBC4B4.03 GO:GO:0003677 EMBL:CU329671
GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0016586 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PIR:T40475 RefSeq:NP_596420.1 ProteinModelPortal:O74964
DIP:DIP-48389N STRING:O74964 EnsemblFungi:SPBC4B4.03.1
GeneID:2540749 KEGG:spo:SPBC4B4.03 KO:K11756 OMA:PANIRNE
OrthoDB:EOG4D5673 NextBio:20801870 GO:GO:1900388 Uniprot:O74964
Length = 803
Score = 133 (51.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 3 LQLLSRSLDPYYFKYGTSTSDEHPVVRN-CYPAMRHIQGDIIQPRDCILLKSGTRKKDLP 61
L+L + LD +F Y T + + +N PA+ I G ++ D +L+++ P
Sbjct: 313 LRLEAGKLDSEFFNYETDSRASPQLPKNDIQPAVS-IDGTLLNVGDWVLIRNPADSSK-P 370
Query: 62 FIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIF-ASRHRDINSVACIED 120
++++ +W++ +D V++ WY RPE T ++E+F S +RD + V+ I
Sbjct: 371 IVSQIYRIWKSDDDINY-VTVCWYLRPEQTVHRADAVFYENEVFKTSLYRD-HPVSEIVG 428
Query: 121 KCYVLTYREYCRYRKK-MRS 139
+C+V+ Y R R K +RS
Sbjct: 429 RCFVMYITRYIRGRPKGIRS 448
Score = 40 (19.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 161 RLLRQPPGQVSPDRVFYCHKVYDFRTKRLLK 191
R +R P + VF C Y+ TK+ K
Sbjct: 437 RYIRGRPKGIRSTPVFVCESRYNDDTKQFSK 467
>TAIR|locus:2137256 [details] [associations]
symbol:AT4G04260 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:CP002687 GO:GO:0003677 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00527780 RefSeq:NP_192335.2 UniGene:At.54133
ProteinModelPortal:F4JGB7 SMR:F4JGB7 EnsemblPlants:AT4G04260.1
GeneID:825742 KEGG:ath:AT4G04260 Uniprot:F4JGB7
Length = 193
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 61 PFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIED 120
P++A+V + E + V WYY PE + G E+F S H D+ S IE
Sbjct: 10 PYVARVEKI-EADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEG 68
Query: 121 KCYVLTYREYCR 132
KC V T++ Y R
Sbjct: 69 KCIVHTFKNYTR 80
>FB|FBgn0051151 [details] [associations]
symbol:wge "winged eye" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007560
"imaginal disc morphogenesis" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:AE014297 GO:GO:0005634 GO:GO:0030154
GO:GO:0003677 GO:GO:0000785 eggNOG:NOG77890
GeneTree:ENSGT00530000063602 GO:GO:0007560 EMBL:AB190214
EMBL:AY118516 RefSeq:NP_001036746.1 RefSeq:NP_732790.2
RefSeq:NP_732791.1 UniGene:Dm.22507 ProteinModelPortal:Q3LHL9
SMR:Q3LHL9 IntAct:Q3LHL9 MINT:MINT-300349 STRING:Q3LHL9
PaxDb:Q3LHL9 PRIDE:Q3LHL9 EnsemblMetazoa:FBtr0110835 GeneID:42687
KEGG:dme:Dmel_CG31151 UCSC:CG31151-RC CTD:42687 FlyBase:FBgn0051151
InParanoid:Q3LHL9 OMA:IKREPCQ OrthoDB:EOG4H9W1N PhylomeDB:Q3LHL9
GenomeRNAi:42687 NextBio:830062 Bgee:Q3LHL9 Uniprot:Q3LHL9
Length = 1658
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 55 TRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINS 114
T + D P+I ++ ++WE G +V + W+Y PE T G +F S H D N
Sbjct: 1523 TGRPDRPYIGRIESMWETTT-GNKVVRVAWFYHPEETT-GCPKLKFPGALFESPHEDEND 1580
Query: 115 VACIEDKCYVLTYREYCRY----RKKMRSIEDN 143
V I +C VL + Y K+ +SI DN
Sbjct: 1581 VQTISHRCEVLQFGSYFEKFGADSKQYQSIYDN 1613
>SGD|S000004349 [details] [associations]
symbol:RSC2 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IPI] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0006276 "plasmid maintenance"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IDA] [GO:0015616 "DNA translocase
activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0007059 "chromosome segregation" evidence=IGI] [GO:0007062
"sister chromatid cohesion" evidence=IMP] InterPro:IPR001025
InterPro:IPR001487 InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 SGD:S000004349 GO:GO:0006355 GO:GO:0003677
EMBL:BK006945 GO:GO:0030435 GO:GO:0000724 GO:GO:0006368
GO:GO:0006276 GO:GO:0006337 GO:GO:0016586 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 EMBL:U19102 GO:GO:0006303 GO:GO:0007062
GO:GO:0042173 GeneTree:ENSGT00390000003017 KO:K11756
OrthoDB:EOG4D5673 HOGENOM:HOG000247903 PANTHER:PTHR16062:SF3
PIR:S51465 RefSeq:NP_013461.1 ProteinModelPortal:Q06488 SMR:Q06488
DIP:DIP-863N IntAct:Q06488 MINT:MINT-666605 STRING:Q06488
PaxDb:Q06488 PeptideAtlas:Q06488 EnsemblFungi:YLR357W GeneID:851071
KEGG:sce:YLR357W CYGD:YLR357w OMA:WFICEFR NextBio:967717
Genevestigator:Q06488 GermOnline:YLR357W Uniprot:Q06488
Length = 889
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 61 PFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFAS-RHRDINSVACIE 119
P + ++ LW+ P DG+ ++ WYYRPE T K+E+ + ++RD + V+ +
Sbjct: 427 PIVGQIFRLWKTP-DGKQWLNACWYYRPEQTVHRVDRLFYKNEVMKTGQYRD-HLVSNLV 484
Query: 120 DKCYVLTYREYCRYRKKMR 138
KCYV+ + Y R M+
Sbjct: 485 GKCYVIHFTRYQRGNPDMK 503
>RGD|1307540 [details] [associations]
symbol:Tnrc18 "trinucleotide repeat containing 18" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
RGD:1307540 GO:GO:0003677 IPI:IPI00947901
Ensembl:ENSRNOT00000001478 UCSC:RGD:1307540 ArrayExpress:F1M2Y3
Uniprot:F1M2Y3
Length = 2816
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 38/148 (25%), Positives = 70/148 (47%)
Query: 38 IQG-DIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTS 96
++G ++I+ DC + S R +LP+I ++ ++WE+ M+V + W+Y PE T G
Sbjct: 2661 VRGKEMIRIGDCAVFLSAGRP-NLPYIGRIQSMWES-WGNNMVVRVKWFYHPEETSPGKQ 2718
Query: 97 YRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIED-NVVNFKIIVPPLG 155
+ + + S H N A + + E Y+ D V+ K +V +G
Sbjct: 2719 FHEGQHWDQKSGH---NLPAALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLV--VG 2773
Query: 156 EGQYERLLRQPPGQVSPDRVFYCHKVYD 183
QYE++L+ Q S + ++Y Y+
Sbjct: 2774 LEQYEQMLKTKKYQDS-EGLYYLAGTYE 2800
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.141 0.446 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 194 194 0.00076 111 3 11 22 0.43 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 613 (65 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.38u 0.12s 18.50t Elapsed: 00:00:01
Total cpu time: 18.38u 0.12s 18.50t Elapsed: 00:00:01
Start: Thu Aug 15 13:35:56 2013 End: Thu Aug 15 13:35:57 2013