Query psy10249
Match_columns 91
No_of_seqs 111 out of 808
Neff 7.2
Searched_HMMs 13730
Date Fri Aug 16 21:40:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10249.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10249hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kf6c_ f.21.2.2 (C:) Fumarate 16.8 99 0.0072 17.9 4.0 49 24-72 38-88 (130)
2 d2k0bx1 a.5.2.1 (X:1-52) Seque 14.6 27 0.0019 17.3 0.8 17 34-50 20-36 (52)
3 d1rh5b_ f.23.28.1 (B:) Preprot 12.4 93 0.0067 15.4 2.7 19 52-70 34-52 (56)
4 d2ozua1 d.108.1.1 (A:507-776) 12.2 36 0.0026 22.4 1.1 25 49-73 174-198 (270)
5 d2giva1 d.108.1.1 (A:4-274) Pr 11.5 39 0.0029 22.2 1.1 22 49-70 174-195 (271)
6 d2hkua2 a.121.1.1 (A:88-208) P 8.6 1.4E+02 0.0099 16.9 2.7 21 20-40 76-96 (121)
7 d1fy7a_ d.108.1.1 (A:) Histone 7.3 1.7E+02 0.013 18.9 3.1 26 49-74 177-202 (273)
8 d1gs0a1 a.41.1.1 (A:207-340) D 5.4 51 0.0037 19.0 -0.5 7 54-60 36-42 (134)
9 d1ijda_ f.3.1.1 (A:) Light-har 5.2 2E+02 0.015 13.5 2.6 17 54-70 19-35 (46)
10 d1efya1 a.41.1.1 (A:662-796) D 4.6 63 0.0046 18.6 -0.5 8 53-60 35-42 (135)
No 1
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=16.75 E-value=99 Score=17.92 Aligned_cols=49 Identities=12% Similarity=0.240 Sum_probs=37.0
Q ss_pred HHHHHHHhhHhhhccccch--hhcccccchhhhhhhHHHHHHHHHHHHHHH
Q psy10249 24 WCLVFMWVIFLSYTGNAGF--LGRLASWKVFLVCTRISYTFYLTQFPLFFY 72 (91)
Q Consensus 24 w~~~~~~~i~~~~~~~~~~--l~~~l~~~~~~~lgrlSY~~YL~h~~vi~~ 72 (91)
+++.+.+.+++...|...+ .-.|+++|....+.-++-.+=|.|-.=.+.
T Consensus 38 f~lvLl~Gl~~L~~g~~aw~~fv~flqnP~vv~lniiaLaa~L~Ha~TwF~ 88 (130)
T d1kf6c_ 38 FSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFE 88 (130)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666777777777765542 467899999999999999999999755443
No 2
>d2k0bx1 a.5.2.1 (X:1-52) Sequestosome 1 (Sqstm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.57 E-value=27 Score=17.35 Aligned_cols=17 Identities=29% Similarity=0.624 Sum_probs=13.0
Q ss_pred hhhccccchhhcccccc
Q psy10249 34 LSYTGNAGFLGRLASWK 50 (91)
Q Consensus 34 ~~~~~~~~~l~~~l~~~ 50 (91)
.-+.+.|||+.++|+.+
T Consensus 20 MGFsneGGWLt~LL~sk 36 (52)
T d2k0bx1 20 MGFSDEGGWLTRLLQTK 36 (52)
T ss_dssp HTCCCSSSCHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHc
Confidence 34567889999998766
No 3
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=12.41 E-value=93 Score=15.39 Aligned_cols=19 Identities=11% Similarity=0.037 Sum_probs=14.5
Q ss_pred hhhhhhHHHHHHHHHHHHH
Q psy10249 52 FLVCTRISYTFYLTQFPLF 70 (91)
Q Consensus 52 ~~~lgrlSY~~YL~h~~vi 70 (91)
+..+|-+-|-+|++|.++-
T Consensus 34 ~~i~G~IGf~I~li~~~i~ 52 (56)
T d1rh5b_ 34 ISLLGIIGYIIHVPATYIK 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4567888888888888763
No 4
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.17 E-value=36 Score=22.36 Aligned_cols=25 Identities=24% Similarity=0.121 Sum_probs=19.0
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHH
Q psy10249 49 WKVFLVCTRISYTFYLTQFPLFFYN 73 (91)
Q Consensus 49 ~~~~~~lgrlSY~~YL~h~~vi~~~ 73 (91)
-|++-.||++||-.|=-.-++-.+.
T Consensus 174 EkPLSdlG~~sY~~YW~~~i~~~L~ 198 (270)
T d2ozua1 174 EKPLSDLGRLSYMAYWKSVILECLY 198 (270)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999997666664443
No 5
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.46 E-value=39 Score=22.19 Aligned_cols=22 Identities=23% Similarity=0.120 Sum_probs=17.0
Q ss_pred cchhhhhhhHHHHHHHHHHHHH
Q psy10249 49 WKVFLVCTRISYTFYLTQFPLF 70 (91)
Q Consensus 49 ~~~~~~lgrlSY~~YL~h~~vi 70 (91)
-|++-.||++||-.|=-.-++-
T Consensus 174 EkPLSdLG~~sY~~YW~~~il~ 195 (271)
T d2giva1 174 EKPLSDLGKLSYRSYWSWVLLE 195 (271)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 3678899999999997655543
No 6
>d2hkua2 a.121.1.1 (A:88-208) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=8.56 E-value=1.4e+02 Score=16.94 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhHhhhcccc
Q psy10249 20 APITWCLVFMWVIFLSYTGNA 40 (91)
Q Consensus 20 ~R~~w~~~~~~~i~~~~~~~~ 40 (91)
.|..|+.+++.++=...+|..
T Consensus 76 sr~FWSaafG~Vlq~~a~g~s 96 (121)
T d2hkua2 76 SKAFWSAIFGLVIQKTATGES 96 (121)
T ss_dssp HHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhhhcccc
Confidence 588999999988877776643
No 7
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.32 E-value=1.7e+02 Score=18.87 Aligned_cols=26 Identities=15% Similarity=0.042 Sum_probs=19.7
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHh
Q psy10249 49 WKVFLVCTRISYTFYLTQFPLFFYNV 74 (91)
Q Consensus 49 ~~~~~~lgrlSY~~YL~h~~vi~~~~ 74 (91)
-|++-.||++||-.|=-..++-.+..
T Consensus 177 EkPLSdlG~~sY~~YW~~~i~~~l~~ 202 (273)
T d1fy7a_ 177 EKPLSDLGLLSYRAYWSDTLITLLVE 202 (273)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 36788999999999977766654443
No 8
>d1gs0a1 a.41.1.1 (A:207-340) Domain of poly(ADP-ribose) polymerase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.37 E-value=51 Score=19.00 Aligned_cols=7 Identities=0% Similarity=0.074 Sum_probs=5.3
Q ss_pred hhhhHHH
Q psy10249 54 VCTRISY 60 (91)
Q Consensus 54 ~lgrlSY 60 (91)
||||||=
T Consensus 36 PLGkLSk 42 (134)
T d1gs0a1 36 PLGKLTV 42 (134)
T ss_dssp CGGGCCH
T ss_pred CcccCCH
Confidence 8888874
No 9
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=5.15 E-value=2e+02 Score=13.46 Aligned_cols=17 Identities=12% Similarity=0.180 Sum_probs=14.1
Q ss_pred hhhhHHHHHHHHHHHHH
Q psy10249 54 VCTRISYTFYLTQFPLF 70 (91)
Q Consensus 54 ~lgrlSY~~YL~h~~vi 70 (91)
.||...-...++|.-++
T Consensus 19 ~LgsVav~s~~VH~avl 35 (46)
T d1ijda_ 19 MLGAVAITALLVHAAVL 35 (46)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57888889999998775
No 10
>d1efya1 a.41.1.1 (A:662-796) Domain of poly(ADP-ribose) polymerase {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=4.58 E-value=63 Score=18.56 Aligned_cols=8 Identities=13% Similarity=0.169 Sum_probs=5.8
Q ss_pred hhhhhHHH
Q psy10249 53 LVCTRISY 60 (91)
Q Consensus 53 ~~lgrlSY 60 (91)
.||||||=
T Consensus 35 mPLGkLSk 42 (135)
T d1efya1 35 MPLGKLSK 42 (135)
T ss_dssp SCGGGCCH
T ss_pred CCcccCCH
Confidence 48888874
Done!