BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1025
(258 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 91/108 (84%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR A RLG+GP D V+ HP
Sbjct: 219 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
FFR INW ++L+RK+EPPFKP L E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 30/36 (83%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTAD 36
MKVL+KA IVRN KDTAHTKAERNILE VK PF D
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD 85
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 91/108 (84%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR A RLG+GP D V+ HP
Sbjct: 219 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
FFR INW ++L+RK+EPPFKP L E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 30/36 (83%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTAD 36
MKVL+KA IVRN KDTAHTKAERNILE VK PF D
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD 85
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF +RK+T+ IL+ KL +P +L+P+A+ L+R L KR A RLG+GP+ E ++ H F
Sbjct: 225 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP 131
F +I+W+ + R++ PPFKP+ +D FD +FT +TP
Sbjct: 285 FSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEFTAKTP 324
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTA 35
MKVL+KA++ +D TK ER+IL V PF
Sbjct: 57 MKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 89
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 209 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDESLLSE----S 143
F SINW DV+ +KL PPFKP +T E D FD +FT Q TP D D L E
Sbjct: 269 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRE 328
Query: 144 ANLVFQGFTYVA 155
+F+ F Y+A
Sbjct: 329 EQEMFEDFDYIA 340
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 40 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 71
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDESLLSE----S 143
F SINW DV+ +KL PPFKP +T E D FD +FT Q TP D D L E
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRE 323
Query: 144 ANLVFQGFTYVA 155
+F+ F Y+A
Sbjct: 324 EQEMFEDFDYIA 335
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 35 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 66
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 207 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDE-SLLSESANL 146
F SINW DV+ +KL PPFKP +T E D FD +FT Q TP D D LL
Sbjct: 267 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRT 326
Query: 147 VFQGFTYVA 155
F F+Y A
Sbjct: 327 HFPQFSYSA 335
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 38 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 69
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDE-SLLSESANL 146
F SINW DV+ +KL PPFKP +T E D FD +FT Q TP D D LL
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRT 323
Query: 147 VFQGFTYVA 155
F F+Y A
Sbjct: 324 HFPQFSYSA 332
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 35 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 66
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
F SINW DV+ +KL PPFKP +T E D FD +FT Q+ +P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP 307
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 35 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 66
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
F SINW DV+ +KL PPFKP +T E D FD +FT Q+ +P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP 307
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 35 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 66
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
F SINW DV+ +KL PPFKP +T E D FD +FT Q+ P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITIXP 307
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + + AHT E +L+ + PF
Sbjct: 35 MKILRKEVII-AKDEVAHTVTESRVLQNTRHPF 66
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF +RK+T+ IL+ KL +P +L+ +A+ L+R L KR A RLGSGP+ E ++ H F
Sbjct: 229 PFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVF 288
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
+ +I+W+ + R+++PPFKP++ DD FDT
Sbjct: 289 YSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDT 321
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTA 35
MKVL+KA++ +D TK ER+IL V PF
Sbjct: 61 MKVLKKATL--KVRDRVRTKMERDILADVNHPFVV 93
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE-AVRVHP 90
PF A+N E IL +++ P +L DA +++ + + RLGS GE A+ HP
Sbjct: 223 PFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQ 149
FF+ I+W+ + R++EPPF+P + +DVS FD F ++ PV P DE L F+
Sbjct: 283 FFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLXPIDEGHLPMINQDEFR 342
Query: 150 GFTYVAPSV 158
F YV+P +
Sbjct: 343 NFEYVSPEL 351
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 28 AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
A +PPF ++ + + I+ + P L+ +A + + L+ + A+RLG GP VR
Sbjct: 215 AGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVR 274
Query: 88 VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
H FFR I+W + +R+++PPFKP + G+ FD FTR PV PD+ +++
Sbjct: 275 EHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLXPPDQLVIANIDQS 333
Query: 147 VFQGFTYVAPSVL 159
F+GF YV P +
Sbjct: 334 DFEGFXYVNPQFV 346
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 10/135 (7%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF + N + + IL L L P +T AR L+ LL++ +RLG+ +D ++ H
Sbjct: 237 PPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHV 295
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-----DSPDESLLSES-- 143
FF INW D++++K+ PPF P+++G +D+ FD +FT + PV +PD L++ S
Sbjct: 296 FFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEE-PVPNAIGKAPDSVLVTASVK 354
Query: 144 -ANLVFQGFTYVAPS 157
A F GF+Y P+
Sbjct: 355 EAAEAFLGFSYAPPT 369
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF +RK+T+ IL+ KL +P +L+P+A+ L+R L KR A RLG+GP+ E ++ H F
Sbjct: 225 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 92 FRSINWSDVLSRKLEPPFKP 111
F +I+W+ + R++ PPFKP
Sbjct: 285 FSTIDWNKLYRREIHPPFKP 304
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTA 35
MKVL+KA++ +D TK ER+IL V PF
Sbjct: 57 MKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 89
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF N KT EKIL +L PP+ D ++L+ +L+ R ++QRLG+ N E V+ HP+
Sbjct: 202 PFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
Query: 92 FRSINWSDVLSRKLEPPFKPSL-TGEDDVSQFD 123
F+ + W +LSR +E P++P + G+ D SQFD
Sbjct: 262 FKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD 294
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MKVL+K +VR K HT ER +L V PF
Sbjct: 36 MKVLKKEIVVR-LKQVEHTNDERLMLSIVTHPF 67
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF +RK+T+ IL+ KL +P +L+P+A+ L+R L KR A RLG+GP+ E ++ H F
Sbjct: 226 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 285
Query: 92 FRSINWSDVLSRKLEPPFKP 111
F +I+W+ + R++ PPFKP
Sbjct: 286 FSTIDWNKLYRREIHPPFKP 305
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTA 35
MKVL+KA++ +D TK ER+IL V PF
Sbjct: 58 MKVLKKATL--KVRDRVRTKMERDILVEVNHPFIV 90
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H F
Sbjct: 209 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
F I W V +KL PPFKP +T E D FD +FT Q TP D D
Sbjct: 269 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 317
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H F
Sbjct: 208 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
F I W V +KL PPFKP +T E D FD +FT Q TP D D
Sbjct: 268 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 316
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H F
Sbjct: 210 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 269
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
F I W V +KL PPFKP +T E D FD +FT Q TP D D
Sbjct: 270 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 318
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H F
Sbjct: 348 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ 129
F I W V +KL PPFKP +T E D FD +FT Q
Sbjct: 408 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ 445
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H F
Sbjct: 351 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 410
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFT 127
F I W V +KL PPFKP +T E D FD +FT
Sbjct: 411 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFT 446
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 28 AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
A + PF ++ + + I+ + P ++ +A + + L+ + +RLG GP ++
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596
Query: 88 VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
H FFR I+W + ++++PP+KP +G + FD FTR PV PD+ ++
Sbjct: 597 EHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRFFTRHPPVLXPPDQEVIRNIDQS 655
Query: 147 VFQGFTYVAPSVLE 160
F+GF +V L+
Sbjct: 656 EFEGFXFVNSEFLK 669
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 32 PFTADNRKKTIEKILRGKL-ILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
PFT D K + +I R L PPY ++ A++LI++LL + +RLG GP D + ++
Sbjct: 261 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK 320
Query: 88 VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQF 122
H FF+ INW D+ ++K+ PFKP + E DVS F
Sbjct: 321 EHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVK-PPF 33
MKVL+KA+IV+ K T HT+ ER +LE ++ PF
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 28 AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
A + PF ++ + + I+ + P ++ +A + + L+ + +RLG GP ++
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275
Query: 88 VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
H FFR I+W + ++++PP+KP G + FD FTR PV PD+ ++
Sbjct: 276 EHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLXPPDQEVIRNIDQS 334
Query: 147 VFQGFTYVAPSVLE 160
F+GF +V L+
Sbjct: 335 EFEGFXFVNSEFLK 348
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 92 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 123
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 92 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 123
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 92 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 123
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 321
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 64 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 95
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K+ HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKEIEHTLNEKRILQAVNFPF 102
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K+ HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKEIEHTLNEKRILQAVNFPF 102
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 321
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 64 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 95
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 231 MAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 226 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 285
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 286 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 323
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 66 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 97
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 218 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 277
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 278 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 315
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 58 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 89
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ PN
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S D
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNAD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 26 LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
+ A + PF ++DN + E IL ++ +P L+ A +++ L + +RL
Sbjct: 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 305
Query: 77 GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
G P G A ++ HPFFR+++W + +++ PPFKP+++GE + FD++FT + P
Sbjct: 306 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 365
Query: 136 -DESLLSESANLVFQGFTYVAPSVL 159
D+ ++ + F+GF Y+ P ++
Sbjct: 366 DDDDIVRKIDQSEFEGFEYINPLLM 390
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 26 LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
+ A + PF ++DN + E IL ++ +P L+ A +++ L + +RL
Sbjct: 199 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 258
Query: 77 GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
G P G A ++ HPFFR+++W + +++ PPFKP+++GE + FD++FT + P
Sbjct: 259 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 318
Query: 136 -DESLLSESANLVFQGFTYVAPSVL 159
D+ ++ + F+GF Y+ P ++
Sbjct: 319 DDDDIVRKIDQSEFEGFEYINPLLM 343
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
+ H +F + +W + RK+E PF P G D S FD
Sbjct: 292 IXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 72 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 103
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 26 LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
+ A + PF ++DN + E IL ++ +P L+ A +++ L + +RL
Sbjct: 203 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 262
Query: 77 GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
G P G A ++ HPFFR+++W + +++ PPFKP+++GE + FD++FT + P
Sbjct: 263 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 322
Query: 136 -DESLLSESANLVFQGFTYVAP 156
D+ ++ + F+GF Y+ P
Sbjct: 323 DDDDIVRKIDQSEFEGFEYINP 344
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 45 ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA-VRVHPFFRSINWSDVLSR 103
IL ++ +P ++ A +++ L + +RLG P G A ++ HPFFR+++W + +
Sbjct: 242 ILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQK 301
Query: 104 KLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQGFTYVAPSVL 159
++ PPFKP+++GE + FD++FT + P D+ ++ + F+GF Y+ P ++
Sbjct: 302 QVVPPFKPNISGEFGLDNFDSQFTNERVQLXPDDDDIVRKIDQSEFEGFEYINPLLM 358
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ +
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ +
Sbjct: 217 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 276
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 277 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 314
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 57 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 88
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ A PPF AD + EKI+ GK+ P + + D ++L+R LL+ + + G+ N
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVND 290
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
++ H +F + +W + RK+E PF P G D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF + ++ I P +L +A++L+ KL R+ +RLG + +R H
Sbjct: 215 QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQH 270
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
P FR INW ++ ++++PPF+P + D S FD +F + P + D +L++ +F
Sbjct: 271 PLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMF 330
Query: 149 QGFTYVAPSV 158
+ F ++ P +
Sbjct: 331 RNFXFMNPGM 340
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF + ++ I P +L +A++L+ KL R+ +RLG + +R H
Sbjct: 216 QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQH 271
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
P FR INW ++ ++++PPF+P + D S FD +F + P + D +L++ +F
Sbjct: 272 PLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLXFADRALINSMDQNMF 331
Query: 149 QGFTYVAPSV 158
+ F ++ P +
Sbjct: 332 RNFXFMNPGM 341
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
LP +P+ R L+ LL+R V +RLG + V+ PFFRS++W V +K PP P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTY-VAPSVLEEMHHD 165
+ D D+ FD + T+ + D+ L + + + VA +V + ++ +
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAE 532
Query: 166 KPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFL 218
R+ RK+T N L + L + M G S G+PFL
Sbjct: 533 TDRL----EARKKTK--NKQLGHEEDYALGKDCIMHG------YMSKMGNPFL 573
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
LP +P+ R L+ LL+R V +RLG + V+ PFFRS++W V +K PP P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTY-VAPSVLEEMHHD 165
+ D D+ FD + T+ + D+ L + + + VA +V + ++ +
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAE 532
Query: 166 KPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFL 218
R+ RK+T N L + L + M G S G+PFL
Sbjct: 533 TDRL----EARKKTK--NKQLGHEEDYALGKDCIMHG------YMSKMGNPFL 573
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
LP +P+ R L+ LL+R V +RLG + V+ PFFRS++W V +K PP P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESL 139
+ D D+ FD + T+ + D+ L
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 505
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
LP +P+ R L+ LL+R V +RLG + V+ PFFRS++W V +K PP P
Sbjct: 412 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESL 139
+ D D+ FD + T+ + D+ L
Sbjct: 472 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 504
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 230 LVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYG 289
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 290 PLKAHPFFESVTWENL 305
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 224 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 284 PLKAHPFFESVTWENL 299
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 224 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 284 PLKAHPFFESVTWENL 299
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 232 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 291
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 292 PLKAHPFFESVTWENL 307
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 209 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 268
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 269 PLKAHPFFESVTWENL 284
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 228 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 288 PLKAHPFFESVTWENL 303
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 228 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 288 PLKAHPFFESVTWENL 303
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 202 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 261
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 262 PLKAHPFFESVTWENL 277
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 203 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 262
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 263 PLKAHPFFESVTWENL 278
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 204 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 263
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 264 PLKAHPFFESVTWENL 279
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N +KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 205 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 264
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 265 PLKAHPFFESVTWENL 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 30 KPPFTADNRKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLGS-GPNDGEAV 86
+ PF A++ +T KI+ + P ++T D E + L++R + R G N E
Sbjct: 294 ETPFYAESLVETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDF 352
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSESA 144
+ H FF +NW ++ R LE P+ P ++ D S FD R T + P
Sbjct: 353 KKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGL 410
Query: 145 NLVFQGFTYVAPSVLEE 161
+L F GFT+ S +
Sbjct: 411 HLPFIGFTFTTESCFSD 427
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 30 KPPFTADNRKKTIEKIL--RGKLILPPYLT---PDARELIRKLLKRQVAQRLGSGPNDGE 84
+ PF A++ +T KI+ + + P +T +A++LIR+L+ + RLG N E
Sbjct: 278 ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLGQ--NGIE 334
Query: 85 AVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSE 142
+ HPFF I+W ++ R E P+ P ++ D S FD + + P
Sbjct: 335 DFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFS 392
Query: 143 SANLVFQGFTYVAPSVLEE 161
+L F GFTY + VL +
Sbjct: 393 GHHLPFVGFTYTSSCVLSD 411
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 30 KPPFTADNRKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLGS-GPNDGEAV 86
+ PF A++ +T KI+ + P ++T D E + L++R + R G N E
Sbjct: 278 ETPFYAESLVETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDF 336
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSESA 144
+ H FF +NW ++ R LE P+ P ++ D S FD R T + P
Sbjct: 337 KKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGL 394
Query: 145 NLVFQGFTYVAPSVLEE 161
+L F GFT+ S +
Sbjct: 395 HLPFIGFTFTTESCFSD 411
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
L A PPF A N KI++ + P P AR+L+ KLL +RLG +G
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86 -VRVHPFFRSINWSDV 100
++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP---S 112
+P AR L +LL + A+RLG V+ HP F+ +N+ + + LEPPFKP +
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQA 471
Query: 113 LTGED--DVSQFDT 124
+ +D D+ QF T
Sbjct: 472 IYCKDVLDIEQFST 485
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP---S 112
+P AR L +LL + A+RLG V+ HP F+ +N+ + + LEPPFKP +
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQA 471
Query: 113 LTGED--DVSQFDT 124
+ +D D+ QF T
Sbjct: 472 IYCKDVLDIEQFST 485
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
A + PF A K + +++L + P +P +++ LL++ +RLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84 EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
+ +R HP FR I+W + + L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
A + PF A K + +++L + P +P +++ LL++ +RLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84 EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
+ +R HP FR I+W + + L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
A + PF A K + +++L + P +P +++ LL++ +RLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84 EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
+ +R HP FR I+W + + L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
A + PF A K + +++L + P +P +++ LL++ +RLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84 EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
+ +R HP FR I+W + + L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 30 KPPFTADNRKKTIEKILRGK--LILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGE 84
+ PF AD+ +T KI+ K L LP + +AR+ I++LL RLG G G+
Sbjct: 267 QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPP-ETRLGRG-GAGD 324
Query: 85 AVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE-- 142
R HPFF ++W + R PPF P G D FD T + S LS+
Sbjct: 325 -FRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIR 381
Query: 143 -----SANLVFQGFTY 153
+L F G++Y
Sbjct: 382 EGAPLGVHLPFVGYSY 397
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+PPF D K T+ K++ +P +L+ +A++LI +LL+R A RL +V H
Sbjct: 209 RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSL-----SSVLDH 263
Query: 90 PFF 92
PF
Sbjct: 264 PFM 266
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 32 PFTADNRKKTIEKIL--RGKLILP--PYLTPDARELIRKLL-KRQVAQRLGSGPNDGEAV 86
PF AD+ T KI+ + L P ++ A+ LI L R+V RLG N E +
Sbjct: 278 PFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREV--RLGR--NGVEEI 333
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
+ HPFF++ W+ R+ P P L+ + D S FD + V++ L
Sbjct: 334 KQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQL 393
Query: 147 VFQGFTY 153
F GFTY
Sbjct: 394 PFIGFTY 400
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 220 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 204 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 205 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 250
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 204 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 204 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 229 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 274
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 205 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 250
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 229 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 274
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 207 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 252
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
PPF A ++T +I R + P ++T AR+LI +LLK +QRL
Sbjct: 208 PPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRL 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
PPF A ++T +I R + P ++T AR+LI +LLK +QRL
Sbjct: 208 PPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRL 253
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 202 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 200 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 206 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
KPPF A+ + T ++I R + P ++T AR+LI +LLK +QR
Sbjct: 203 KPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 32 PFTADNRKKTIEKIL--RGKLILPPY--LTPDARELIRKLL-KRQVAQRLGSGPNDGEAV 86
PF AD+ T KI+ + L P ++ +A+ LI L R+V RLG N E +
Sbjct: 277 PFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV--RLGR--NGVEEI 332
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
+ H FF++ W+ R P P L+ + D S FD
Sbjct: 333 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 369
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 32 PFTADNRKKTIEKIL--RGKLILPPY--LTPDARELIRKLL-KRQVAQRLGSGPNDGEAV 86
PF AD+ T KI+ + L P ++ +A+ LI L R+V RLG N E +
Sbjct: 272 PFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV--RLGR--NGVEEI 327
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
+ H FF++ W+ R P P L+ + D S FD
Sbjct: 328 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 364
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 32 PFTADNRKKTIEKIL--RGKLILPPY--LTPDARELIRKLL-KRQVAQRLGSGPNDGEAV 86
PF AD+ T KI+ + L P ++ +A+ LI L R+V RLG N E +
Sbjct: 277 PFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV--RLGR--NGVEEI 332
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
+ H FF++ W+ R P P L+ + D S FD
Sbjct: 333 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 369
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF + + +T +I+ L PP+L+ +++LI KLL+ QRL P G V HP
Sbjct: 210 PPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRL---PLKG--VMEHP 264
Query: 91 FFRSINWSDVLSRKLEPP 108
W SR++ PP
Sbjct: 265 ------WVKANSRRVLPP 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF + + +T +I+ L PP+L+ +++LI KLL+ QRL P G V HP
Sbjct: 211 PPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRL---PLKG--VMEHP 265
Query: 91 FFRSINWSDVLSRKLEPP 108
W SR++ PP
Sbjct: 266 ------WVKANSRRVLPP 277
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF + + +T +I+ L PP+L+ +++LI KLL+ QRL P G V HP
Sbjct: 210 PPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRL---PLKG--VMEHP 264
Query: 91 FFRSINWSDVLSRKLEPP 108
W SR++ PP
Sbjct: 265 ------WVKANSRRVLPP 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L++K L
Sbjct: 205 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L+++ L
Sbjct: 210 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y++ D L+++ L
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 249
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
PF N K+ E++LRGK +P Y + D L++K L
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFL 248
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 2 KVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDAR 61
++++ S + ++ D +L PF DN +KI+RGK +P +L+P +
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI 238
Query: 62 ELIRKLLKRQVAQRL 76
L++++L+ +R+
Sbjct: 239 LLLQQMLQVDPKKRI 253
>pdb|3R3J|A Chain A, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|B Chain B, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|C Chain C, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|D Chain D, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|E Chain E, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|F Chain F, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
Length = 456
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 4 LRKASIVRNQKDTAHTKAERNILEAVKPPFTADN-RKKTIEKILRGKLILP---PYLTPD 59
LR+ + +N+ + +A +L +KP F DN +E I + ++ P++
Sbjct: 19 LREKVVSKNKNEPEFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDK 78
Query: 60 ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT----- 114
+ + + Q L GP G +R HP ++N S + E FK SLT
Sbjct: 79 GEHKMNRGFRVQYNSVL--GPYKG-GLRFHP---AVNLSVIKFLGFEQIFKNSLTTLPMG 132
Query: 115 GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPS 157
G S FD K + + +S ++ NL F Y+ P+
Sbjct: 133 GGKGGSDFDPKGKSENEILKFCQSFMT---NL----FRYIGPN 168
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 32 PFTADNRKKTIEKILRGKLIL--PPY--LTPDARELIRKLLKRQVAQRL 76
PF N TI ++L KL P Y L+P AR+L+ LL R V +R
Sbjct: 275 PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF 323
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF + + +T +I++ L P + A++LI KLL+ ++RL V HP
Sbjct: 219 PPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLA-----QVSAHP 273
Query: 91 FFRSINWSDVLSRKLEPP 108
W SR++ PP
Sbjct: 274 ------WVRANSRRVLPP 285
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF DN K E I +G +P P +L++ +L+ + A+R +R H +
Sbjct: 212 PFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSI-----RQIRQHSW 266
Query: 92 FR 93
FR
Sbjct: 267 FR 268
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKLILPPY----LTPDARELIRKLLKRQVAQRLGS 78
+L PPF+A + + KI G P ++P A LIR+LL + QR+ S
Sbjct: 216 VLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS 273
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKLILPPY----LTPDARELIRKLLKRQVAQRLGS 78
+L PPF+A + + KI G P ++P A LIR+LL + QR+ S
Sbjct: 199 VLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS 256
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS 112
P + + L++KLL+ QR + V+ P+ INW V ++L P F P+
Sbjct: 240 PSAWSQEMVSLLKKLLEPNPDQRFSQLSD----VQNFPYMNDINWDAVFQKRLIPGFIPN 295
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 15 DTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLI--LPPY--LTPDARELIRKLL 68
D T IL + PPF N ++K+ +GK LP + ++ A++LIRK+L
Sbjct: 233 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 15 DTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLI--LPPY--LTPDARELIRKLL 68
D T IL + PPF N ++K+ +GK LP + ++ A++LIRK+L
Sbjct: 215 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 15 DTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLI--LPPY--LTPDARELIRKLL 68
D T IL + PPF N ++K+ +GK LP + ++ A++LIRK+L
Sbjct: 232 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 15 DTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLI--LPPY--LTPDARELIRKLL 68
D T IL + PPF N ++K+ +GK LP + ++ A++LIRK+L
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
>pdb|1L8L|A Chain A, Molecular Basis For The Local Confomational Rearrangement
Of Human Phosphoserine Phosphatase
pdb|1L8L|B Chain B, Molecular Basis For The Local Confomational Rearrangement
Of Human Phosphoserine Phosphatase
pdb|1L8O|A Chain A, Molecular Basis For The Local Conformational Rearrangement
Of Human Phosphoserine Phosphatase
pdb|1L8O|B Chain B, Molecular Basis For The Local Conformational Rearrangement
Of Human Phosphoserine Phosphatase
Length = 225
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 53 PPYLTPDARELIRKLLKRQVAQRLGSG 79
PP+LTP REL+ +L +R V L SG
Sbjct: 84 PPHLTPGIRELVSRLQERNVQVFLISG 110
>pdb|1NNL|A Chain A, Crystal Structure Of Human Phosphoserine Phosphatase
pdb|1NNL|B Chain B, Crystal Structure Of Human Phosphoserine Phosphatase
Length = 225
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 53 PPYLTPDARELIRKLLKRQVAQRLGSG 79
PP+LTP REL+ +L +R V L SG
Sbjct: 84 PPHLTPGIRELVSRLQERNVQVFLISG 110
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDA 60
PF N K+ E++LRGK +P Y++ D
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPFYMSTDC 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 212 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 251
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 218 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 257
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 214 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 214 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 253
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 5 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 63
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 64 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 110
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFD------------TK 125
PN V + F + W D +SRK P PS TGE V++ D
Sbjct: 11 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS-TGEVICQVAEGDKEDVDKAVKAARAA 69
Query: 126 FTRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
F +P D S LL+ A+L+ + TY+A LE + + KP ++
Sbjct: 70 FQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA--ALETLDNGKPYVI 116
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 236 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGP 80
IL PPF +++ + ++I G P +TP+A++LI K+L A+R+ +
Sbjct: 198 ILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA-- 255
Query: 81 NDGEAVRVHPFF 92
EA++ HP+
Sbjct: 256 --SEALK-HPWI 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLK 69
KPPF K+T +I + + +P ++ P A LI+K+L+
Sbjct: 238 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ 277
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGP 80
IL PPF +++ + ++I G P +TP+A++LI K+L A+R+ +
Sbjct: 198 ILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITA-- 255
Query: 81 NDGEAVRVHPFF 92
EA++ HP+
Sbjct: 256 --SEALK-HPWI 264
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 19/108 (17%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSL------TGEDDVSQFD-------TKF 126
PN V + F + W D +S+K P PS E D + D F
Sbjct: 10 PNQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAF 69
Query: 127 TRQTPVDSPDES----LLSESANLVFQGFTYVAPSVLEEMHHDKPRIV 170
+P D S LL+ A+L+ + TY+A LE + + KP I+
Sbjct: 70 QLGSPWRRMDASERGRLLNRLADLIERDRTYLA--ALETLDNGKPYII 115
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 37 NRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
N +KTI +IL + +P Y ++P+ R LI ++ A+R+ S P +R H +F
Sbjct: 224 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI-SIPE----IRNHEWF 276
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPD-ARELIRKLL 68
L A+ PPFTA ++K+ KI GK PY D E+I ++L
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
KPPF K+T +I + + +P ++ P A LIR++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
>pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 2 KVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDAR 61
KVL+K I RN D A I + + + + I K++ K + P Y P
Sbjct: 786 KVLKKILIERNV-DGALAFVRETINDIL-------HNRVDISKLIISKTLAPNYTNPQPH 837
Query: 62 ELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQ 121
++ + +KR R G GPN G+ V + I +D L + E P E+++ Q
Sbjct: 838 AVLAERMKR----REGVGPNVGDRVD----YVIIGGNDKLYNRAEDPL---FVLENNI-Q 885
Query: 122 FDTKFTRQTPVDSPDESLLS 141
D+++ + +P S+++
Sbjct: 886 VDSRYYLTNQLQNPIISIVA 905
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPD-ARELIRKLL 68
L A+ PPFTA ++K+ KI GK PY D E+I ++L
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 26 LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDA-RELIRKLL 68
L A+ PPFTA ++K+ KI GK PY D E+I ++L
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
KPPF K+T +I + + +P ++ P A LIR++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
KPPF K+T +I + + +P ++ P A LIR++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 38 RKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR 93
+ K E I GK P +++ +A++LI KLL R QRL + V HP+ +
Sbjct: 246 QNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQ-----VLQHPWVQ 300
Query: 94 S 94
Sbjct: 301 G 301
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 37 NRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
N +KTI +IL + +P Y ++P+ R LI ++ A+R+ S P +R H +F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI-SIPE----IRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 37 NRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
N +KTI +IL + +P Y ++P+ R LI ++ A+R+ S P +R H +F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI-SIPE----IRNHEWF 277
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLL 68
KPPF K+T +I + + +P ++ P A LIR++L
Sbjct: 223 KPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 37 NRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
N +KTI +IL + +P Y ++P+ R LI ++ A+R+ S P +R H +F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI-SIPE----IRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 37 NRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
N +KTI +IL + +P Y ++P+ R LI ++ A+R+ S P +R H +F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI-SIPE----IRNHEWF 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K+ ++P +L+P A+ LIR+++ QR+ + +R P+
Sbjct: 207 PFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITI-----QEIRRDPW 261
Query: 92 FRSINWSDVL 101
F ++N D L
Sbjct: 262 F-NVNLPDYL 270
>pdb|2FH8|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae
Pullulanase Complexed With Isomaltose
Length = 922
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
+ ++ S V +L P F + E D V+ F+R V+S +S SE A
Sbjct: 302 LKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKS--SEFAGYCDS 359
Query: 150 GFTYVAPSVLEEMHH----DKPRIVKARSPRKETSSYNYYLKPHHH 191
G T VL ++ D P++ + +T SYN+ P H+
Sbjct: 360 GST--VEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHY 403
>pdb|2FGZ|A Chain A, Crystal Structure Analysis Of Apo Pullulanase From
Klebsiella Pneumoniae
Length = 926
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
+ ++ S V +L P F + E D V+ F+R V+S +S SE A
Sbjct: 306 LKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKS--SEFAGYCDS 363
Query: 150 GFTYVAPSVLEEMHH----DKPRIVKARSPRKETSSYNYYLKPHHH 191
G T VL ++ D P++ + +T SYN+ P H+
Sbjct: 364 GST--VEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHY 407
>pdb|2FH6|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae
Pullulanase Complexed With Glucose
Length = 920
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
+ ++ S V +L P F + E D V+ F+R V+S +S SE A
Sbjct: 300 LKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKS--SEFAGYCDS 357
Query: 150 GFTYVAPSVLEEMHH----DKPRIVKARSPRKETSSYNYYLKPHHH 191
G T VL ++ D P++ + +T SYN+ P H+
Sbjct: 358 GST--VEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHY 401
>pdb|1GG4|A Chain A, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide
D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom
Resolution
pdb|1GG4|B Chain B, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide
D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom
Resolution
Length = 452
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGED------DVSQFDTKFTRQTPVD 133
P +G A+ +NW V+ + F P+ D V+ T+FT QTP
Sbjct: 210 PENGIAIXNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTG 269
Query: 134 SPD 136
S D
Sbjct: 270 SVD 272
>pdb|2FHB|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae
Pullulanase Complexed With Maltose
pdb|2FHC|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae
Pullulanase Complexed With Maltotriose
pdb|2FHF|A Chain A, Crystal Structure Analysis Of Klebsiella Pneumoniae
Pullulanase Complexed With Maltotetraose
Length = 1083
Score = 27.3 bits (59), Expect = 9.0, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGE--DDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
+ ++ S V +L P F + E D V+ F+R V+S +S SE A
Sbjct: 463 LKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKS--SEFAGYCDS 520
Query: 150 GFTY--VAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHH 191
G T V + + D P++ + +T SYN+ P H+
Sbjct: 521 GSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHY 564
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,080,077
Number of Sequences: 62578
Number of extensions: 348519
Number of successful extensions: 1734
Number of sequences better than 100.0: 226
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1443
Number of HSP's gapped (non-prelim): 300
length of query: 258
length of database: 14,973,337
effective HSP length: 97
effective length of query: 161
effective length of database: 8,903,271
effective search space: 1433426631
effective search space used: 1433426631
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)