RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1025
(258 letters)
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 190 bits (485), Expect = 3e-59
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF ++ + + I+ + P ++ +A + + L+ + +RLG GP ++ H
Sbjct: 218 QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
FFR I+W + ++++PP+KP G + FD FTR PV +P D+ ++ F
Sbjct: 278 AFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEF 336
Query: 149 QGFTYVAPSVLEEMHH 164
+GF++V L+
Sbjct: 337 EGFSFVNSEFLKPEVK 352
Score = 50.3 bits (121), Expect = 2e-07
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
+K+L+K ++++ D T E+ +L KPPF
Sbjct: 50 VKILKKDVVIQD-DDVECTMVEKRVLALPGKPPF 82
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 183 bits (468), Expect = 1e-56
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE-AVRV 88
PF A+N E IL +++ P +L DA +++ + + RLGS GE A+
Sbjct: 221 HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280
Query: 89 HPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLV 147
HPFF+ I+W+ + R++EPPF+P + +DVS FD F ++ PV +P DE L
Sbjct: 281 HPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDE 340
Query: 148 FQGFTYVAPSV 158
F+ F YV+P +
Sbjct: 341 FRNFEYVSPEL 351
Score = 48.8 bits (117), Expect = 6e-07
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAV-KPPF 33
+KVL+K I+++ D T E+ IL PF
Sbjct: 53 VKVLKKDVILQD-DDVECTMTEKRILSLARNHPF 85
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 179 bits (457), Expect = 3e-55
Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF + ++ E IL ++ P L+P+A+ L+ LLK+ QRLG GP+D + V H
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE--------SLLS 141
FF SINW DV+ +KL PPFKP +T E D FD +FT Q+ +P + L
Sbjct: 262 RFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQ 321
Query: 142 ESANLVFQGFTYVA 155
+F+ F Y+A
Sbjct: 322 REEQEMFEDFDYIA 335
Score = 53.8 bits (130), Expect = 1e-08
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+LRK I+ + AHT E +L+ + PF
Sbjct: 35 MKILRKEVIIAK-DEVAHTVTESRVLQNTRHPF 66
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 175 bits (447), Expect = 7e-54
Identities = 75/109 (68%), Positives = 91/109 (83%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR A RLG+GP D V+ H
Sbjct: 218 APPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
PFFR INW ++L+RK+EPPFKP L E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 278 PFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326
Score = 63.7 bits (156), Expect = 4e-12
Identities = 28/33 (84%), Positives = 29/33 (87%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MKVL+KA IVRN KDTAHTKAERNILE VK PF
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 182 bits (464), Expect = 1e-53
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF ++ + + I+ + P ++ +A + + L+ + +RLG GP ++ H
Sbjct: 539 QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
FFR I+W + ++++PP+KP +G + FD FTR PV +P D+ ++ F
Sbjct: 599 AFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEF 657
Query: 149 QGFTYVAPSVLEEMHH 164
+GF++V L+
Sbjct: 658 EGFSFVNSEFLKPEVK 673
Score = 45.0 bits (106), Expect = 1e-05
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
+K+L+K ++++ D T E+ +L KPPF
Sbjct: 371 VKILKKDVVIQD-DDVECTMVEKRVLALPGKPPF 403
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 176 bits (449), Expect = 2e-53
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 30 KPPFT---------ADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGP 80
+ PF + + IL ++ +P L+ A +++ L + +RLG P
Sbjct: 250 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 309
Query: 81 NDG-EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DES 138
G ++ HPFFR+++W + +++ PPFKP+++GE + FD++FT + +P D+
Sbjct: 310 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDD 369
Query: 139 LLSESANLVFQGFTYVAPSVLEE 161
++ + F+GF Y+ P ++
Sbjct: 370 IVRKIDQSEFEGFEYINPLLMSA 392
Score = 48.1 bits (115), Expect = 1e-06
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
M+V++K + + +D + E+++ E A PF
Sbjct: 82 MRVVKKELVNDD-EDIDWVQTEKHVFEQASNHPF 114
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 173 bits (442), Expect = 6e-53
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PF + ++ I P +L +A++L+ KL R+ +RLG + +R HP
Sbjct: 216 SPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQHP 271
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQ 149
FR INW ++ ++++PPF+P + D S FD +F + P S D +L++ +F+
Sbjct: 272 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFR 331
Query: 150 GFTYVAPSVLE 160
F+++ P +
Sbjct: 332 NFSFMNPGMER 342
Score = 48.4 bits (116), Expect = 8e-07
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
+K L+K ++ + D T E+ +L A + PF
Sbjct: 47 IKALKKDVVLMD-DDVECTMVEKRVLSLAWEHPF 79
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 171 bits (435), Expect = 8e-52
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 30 KPPFT---------ADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGP 80
+ PF + + IL ++ +P L+ A +++ L + +RLG P
Sbjct: 207 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 266
Query: 81 NDG-EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DES 138
G ++ HPFFR+++W + +++ PPFKP+++GE + FD++FT + +P D+
Sbjct: 267 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDD 326
Query: 139 LLSESANLVFQGFTYVAP 156
++ + F+GF Y+ P
Sbjct: 327 IVRKIDQSEFEGFEYINP 344
Score = 48.4 bits (116), Expect = 7e-07
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
MKV++K + + +D + E+++ E A PF
Sbjct: 39 MKVVKKELVNDD-EDIDWVQTEKHVFEQASNHPF 71
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 171 bits (436), Expect = 1e-51
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
PPF + N + + IL L L P +T AR L+ LL++ +RLG+ +D ++ H
Sbjct: 236 LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKSH 294
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-------DESLLSE 142
FF INW D++++K+ PPF P+++G +D+ FD +FT + ++ + +
Sbjct: 295 VFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDSVLVTASVK 354
Query: 143 SANLVFQGFTYVAPS 157
A F GF+Y P+
Sbjct: 355 EAAEAFLGFSYAPPT 369
Score = 50.0 bits (120), Expect = 2e-07
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNIL-EAVKPPF 33
+KVL+K +I++ K+ H +ERN+L + VK PF
Sbjct: 68 VKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPF 100
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 166 bits (421), Expect = 5e-49
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 31 PPFTADNRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PF A++ +T KI+ K ++ +A++LIR+L+ + RLG N E
Sbjct: 279 TPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLGQ--NGIED 335
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDS--PDESLLSES 143
+ HPFF I+W ++ R E P+ P ++ D S FD ++ P
Sbjct: 336 FKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSG 393
Query: 144 ANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHH 192
+L F GFTY + VL + R TS+ N Y + HHHH
Sbjct: 394 HHLPFVGFTYTSSCVLSDRSC-------LRVTAGPTSAENLYFQSHHHH 435
Score = 53.2 bits (128), Expect = 2e-08
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +++ + +TA + ER++L +
Sbjct: 104 MKILNKWEMLK-RAETACFREERDVLVNGDSKW 135
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 162 bits (412), Expect = 1e-48
Identities = 43/102 (42%), Positives = 67/102 (65%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
PF +RK+T+ IL+ KL +P +L+P+A+ L+R L KR A RLG+GP+ E ++ H
Sbjct: 223 TLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP 131
FF +I+W+ + R++ PPFKP+ +D FD +FT +TP
Sbjct: 283 SFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEFTAKTP 324
Score = 57.2 bits (139), Expect = 9e-10
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MKVL+KA++ +D TK ER+IL V PF
Sbjct: 57 MKVLKKATLK--VRDRVRTKMERDILVEVNHPF 87
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 165 bits (418), Expect = 5e-47
Identities = 42/190 (22%), Positives = 68/190 (35%), Gaps = 28/190 (14%)
Query: 30 KPPFTADNRKKTIE---KILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF K E L + LP +P+ R L+ LL+R V +RLG + V
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSL-----TGEDDVSQFDTKFTRQTPVDSPDESLLS 141
+ PFFRS++W V +K PP P D+ FD + T+ + D+ L
Sbjct: 448 KESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL-- 505
Query: 142 ESANLVFQGFTYVAPSVLEE--------MHHDKPRIVKARSPRKETSSYNYYLKPHH--- 190
++ F ++ + + ++AR K +
Sbjct: 506 ------YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDC 559
Query: 191 -HHGLPQQSG 199
HG + G
Sbjct: 560 IMHGYMSKMG 569
Score = 44.9 bits (106), Expect = 1e-05
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 4/36 (11%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVK---PPF 33
MK L K I + ER +L V PF
Sbjct: 219 MKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPF 253
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 157 bits (399), Expect = 5e-46
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF AD+ T KI+ K L ++ +A+ LI L + RLG N E +
Sbjct: 271 TPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR-EVRLGR--NGVEEI 327
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
+ H FF++ W+ R P P L+ + D S FD + ++ L
Sbjct: 328 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQL 387
Query: 147 VFQGFTYVAPSVLEE 161
F GFTY +
Sbjct: 388 PFVGFTYYSNRRYLS 402
Score = 49.7 bits (119), Expect = 3e-07
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +++ + D+A ER+I+ P+
Sbjct: 99 MKLLSKFEMIK-RSDSAFFWEERDIMAFANSPW 130
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 151 bits (384), Expect = 2e-44
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PPF AD + EKI+ GK+ P + + D ++L+R LL+ + +R G+ N ++ H
Sbjct: 236 PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295
Query: 91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
+F + +W + RK+E PF P G D S FD + + S +E E F
Sbjct: 296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEEIRVSINEKCGKE-----FTE 349
Query: 151 F 151
F
Sbjct: 350 F 350
Score = 50.4 bits (121), Expect = 2e-07
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L K +V+ K HT E+ IL+AV PF
Sbjct: 71 MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 151 bits (383), Expect = 1e-43
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 17/143 (11%)
Query: 31 PPFTADNRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PF AD+ +T KI+ K L + +AR+ I++LL RLG G
Sbjct: 268 TPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPP-ETRLGRG--GAGD 324
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE--- 142
R HPFF ++W + R PPF P G D FD T + S LS+
Sbjct: 325 FRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIRE 382
Query: 143 ----SANLVFQGFTYVAPSVLEE 161
+L F G++Y ++ +
Sbjct: 383 GAPLGVHLPFVGYSYSCMALRDS 405
Score = 49.7 bits (119), Expect = 3e-07
Identities = 6/33 (18%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK++ K +++ + + + + ER++L +
Sbjct: 91 MKIMNKWDMLK-RGEVSCFREERDVLVNGDRRW 122
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 152 bits (385), Expect = 1e-43
Identities = 41/100 (41%), Positives = 55/100 (55%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+ PF + +K E IL ++ P L P+A+ L+ LLK+ QRLG G D + + H
Sbjct: 346 RLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ 129
FF I W V +KL PPFKP +T E D FD +FT Q
Sbjct: 406 RFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ 445
Score = 51.7 bits (124), Expect = 7e-08
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK+L+K IV + AHT E +L+ + PF
Sbjct: 178 MKILKKEVIVAK-DEVAHTLTENRVLQNSRHPF 209
Score = 29.3 bits (66), Expect = 1.4
Identities = 6/44 (13%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 94 SINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE 137
S+ ++ + P + + + R V++P+E
Sbjct: 56 SVAQCQLMKTERPRPNTFIIRCLQWTTVIE----RTFHVETPEE 95
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 148 bits (377), Expect = 2e-43
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
PF N KT EKIL +L PP+ D ++L+ +L+ R ++QRLG+ N E V+ HP
Sbjct: 201 TPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260
Query: 91 FFRSINWSDVLSRKLEPPFKPSLT-GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
+F+ + W +LSR +E P++P + G+ D SQFD K+ + + +F+
Sbjct: 261 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD-KYPEEDINYGVQ---GEDPYADLFR 316
Query: 150 GF 151
F
Sbjct: 317 DF 318
Score = 53.7 bits (130), Expect = 1e-08
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MKVL+K +VR K HT ER +L V PF
Sbjct: 36 MKVLKKEIVVR-LKQVEHTNDERLMLSIVTHPF 67
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 144 bits (366), Expect = 4e-40
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 30 KPPFTADNRKKTIEK----ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ PF +K E+ + +P AR L +LL + A+RLG
Sbjct: 382 QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGED--DVSQFDTKFTRQTPVDSPDESLLSES 143
V+ HP F+ +N+ + + LEPPFKP DV + T + P +
Sbjct: 442 VKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD------ 495
Query: 144 ANLVFQGFTYVAPSV--LEEM 162
+Q F + + EM
Sbjct: 496 -QDFYQKFATGSVPIPWQNEM 515
Score = 48.2 bits (115), Expect = 1e-06
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
K L K I + K A E+ ILE V F
Sbjct: 214 CKKLEKKRIKKR-KGEAMALNEKQILEKVNSRF 245
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 137 bits (347), Expect = 7e-39
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 30 KPPFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PFT D K + +IL+ + P ++ A++LI++LL + +RLG GP D +
Sbjct: 259 ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE 318
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQF 122
++ H FF+ INW D+ ++K+ PFKP + E DVS F
Sbjct: 319 IKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
Score = 58.8 bits (143), Expect = 2e-10
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAV-KPPF 33
MKVL+KA+IV+ K T HT+ ER +LE + + PF
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 137 bits (347), Expect = 1e-37
Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 23/172 (13%)
Query: 30 KPPFTADNRKKTIE----KILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
+ PF A K + ++L + P +P +++ LL++ +RLG +
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG 445
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTG-----EDDVSQFDTKFTRQTPVDSPDESLL 140
+R HP FR I+W + + L PPF P DV F T + + D
Sbjct: 446 LRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV--KGVAFEKADTEF- 502
Query: 141 SESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHH 192
FQ F + + + + + + + HHHH
Sbjct: 503 -------FQEFASGTCPIPWQEEMIETGVFGDLNVWRP----DGVDHHHHHH 543
Score = 49.4 bits (118), Expect = 5e-07
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
K L K + + K E+ IL V F
Sbjct: 215 CKKLNKKRLKKR-KGYQGAMVEKKILAKVHSRF 246
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 116 bits (293), Expect = 8e-31
Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 24/169 (14%)
Query: 30 KPPF---TADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
+ P+ ++ + K+ + + P + + L++KLL+ QR V
Sbjct: 214 RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS----QLSDV 269
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV--DSPDESLLSESA 144
+ P+ INW V ++L P F P+ D F + + P A
Sbjct: 270 QNFPYMNDINWDAVFQKRLIPGFIPNK----GRLNCDPTFELEEMILESKPLHKKKKRLA 325
Query: 145 --NLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHH 191
+ +L+E S +KE +N
Sbjct: 326 KKEKDMRKCDSSQTCLLQEHL---------DSVQKEFIIFNREKVNRDF 365
Score = 50.8 bits (122), Expect = 1e-07
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
MK + K V + + + E I++ ++ PF
Sbjct: 45 MKYMNKQKCVE-RNEVRNVFKELQIMQGLEHPF 76
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 109 bits (274), Expect = 2e-28
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG-EAVRV 88
PPF A N +KI++ + P P AR+L+ KLL +RLG +G ++
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 288
Query: 89 HPFFRSINWSDVLSRKLEPPFK 110
HPFF S+ W ++ + P
Sbjct: 289 HPFFESVTWENLHQQTP-PKLT 309
Score = 50.7 bits (122), Expect = 1e-07
Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
+K+L K I++ + + ER+++ + PF
Sbjct: 60 IKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 74.6 bits (184), Expect = 6e-16
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
PPF + + +T +I+ L PP+L+ +++LI KLL+ QRL + V H
Sbjct: 209 MPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPL-----KGVMEH 263
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGE 116
P+ + SR++ PP S +
Sbjct: 264 PWVK------ANSRRVLPPVYQSTQSK 284
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 70.7 bits (174), Expect = 1e-14
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
KPPF A+ ++T ++I R + P ++T AR+LI +LLK +QR V H
Sbjct: 204 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML-----REVLEH 258
Query: 90 PFFRSINWSDVLSRKLEPPFK 110
P+ + + + E K
Sbjct: 259 PWITANSSKPSNCQNKESASK 279
Score = 28.3 bits (64), Expect = 2.2
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 1 MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
+KVL KA + + + E I ++ P
Sbjct: 39 LKVLFKAQLEKA-GVEHQLRREVEIQSHLRHPN 70
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 60.2 bits (147), Expect = 5e-11
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
+PPF D K T+ K++ +P +L+ +A++LI +LL+R A RL +V H
Sbjct: 209 RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSL-----SSVLDH 263
Query: 90 PFFR 93
PF
Sbjct: 264 PFMS 267
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 56.8 bits (138), Expect = 1e-09
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
KPPF K+T +I + + +P ++ P A LI+K+L+ R +
Sbjct: 212 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLND 266
Query: 90 PFFRS 94
FF S
Sbjct: 267 EFFTS 271
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 56.7 bits (137), Expect = 1e-09
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 25/103 (24%)
Query: 30 KPPFTAD-NRKKTIEKILRGKLILP-------------------PYLTPDARELIRKLLK 69
PF+ + + I + P +L+ + + ++ L+
Sbjct: 249 VVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308
Query: 70 RQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS 112
+ A+R+ S E H + N D+ E K
Sbjct: 309 KNPAERITS-----EDALKHEWLADTNIEDLREFSKELYKKRK 346
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 56.5 bits (137), Expect = 1e-09
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
KPPF K+T +I + + +P ++ P A LI+K+L+ R +
Sbjct: 238 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLND 292
Query: 90 PFFRS 94
FF S
Sbjct: 293 EFFTS 297
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 55.8 bits (135), Expect = 2e-09
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPYL----TPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
P T R ++K+ + PP +++IR L+ +R P +
Sbjct: 227 PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR----PGARTLL 282
Query: 87 RVHPFFRSINWSDVLSRKLE 106
+ + +V+ L+
Sbjct: 283 N-SGWLPVKHQDEVIKEALK 301
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 53.7 bits (129), Expect = 2e-08
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 30 KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PF N TI ++L KL L+P AR+L+ LL R V +R +
Sbjct: 273 AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA-----MR 327
Query: 86 VRVHPFFR 93
HP+
Sbjct: 328 ALQHPWIS 335
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 53.1 bits (127), Expect = 2e-08
Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 18/118 (15%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
P T D E I R +P R L+ L+ RL
Sbjct: 314 DLPNTDDAALGGSEWIFRSCKNIPQP----VRALLEGFLRYPKEDRLLP-----LQAMET 364
Query: 90 PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLV 147
P + + R P + + ++ T PDE+ +E+ +
Sbjct: 365 PEYEQL-------RTELSAALPLYQTDGEPTREGGAPPSGTS--QPDEAGAAEAVTAI 413
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 52.7 bits (127), Expect = 3e-08
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF N K+ E++LRGK +P Y++ D L+++ L +R E + +
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL-----EQIMKDRW 267
Query: 92 FRSINWSDVLSRKLEPPFKPS 112
+ + D L +EP S
Sbjct: 268 INAGHEEDELKPFVEPELDIS 288
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 51.9 bits (125), Expect = 5e-08
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF DN K E I +G +P P +L++ +L+ + A+R +R H +
Sbjct: 212 PFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSI-----RQIRQHSW 266
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
FR P P D + T
Sbjct: 267 FRK-----KHPPAEAPVPIPPSPDTKDRWRSMT 294
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 51.9 bits (124), Expect = 5e-08
Identities = 12/66 (18%), Positives = 17/66 (25%), Gaps = 9/66 (13%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
P T D E I R + R L+ L+ RL
Sbjct: 310 DLPITKDAALGGSEWIFRS----CKNIPQPVRALLEGFLRYPKEDRLLP-----LQAMET 360
Query: 90 PFFRSI 95
P + +
Sbjct: 361 PEYEQL 366
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 51.4 bits (124), Expect = 5e-08
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PPF+A + + KI G P ++P A LIR+LL + QR+ S
Sbjct: 205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS-----LQA 259
Query: 87 RVHPFFRS 94
H +F
Sbjct: 260 LEHEWFEK 267
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 51.5 bits (124), Expect = 6e-08
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 31 PPFTADNRKKTIEKILRGKLILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
PFT + ++ +K + LTP A +L++++L + +R + V
Sbjct: 223 LPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSA-----AQVL 277
Query: 88 VHPFFR 93
H +F+
Sbjct: 278 HHEWFK 283
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 51.5 bits (124), Expect = 6e-08
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PPF + + I+ G + ++L+ + L Q +R + E
Sbjct: 227 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----EEA 281
Query: 87 RVHPFFRSINWSDV 100
HPFF+ +V
Sbjct: 282 LAHPFFQQYVVEEV 295
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 52.2 bits (124), Expect = 6e-08
Identities = 51/326 (15%), Positives = 87/326 (26%), Gaps = 100/326 (30%)
Query: 9 IVRNQKDTAHTKA------------ERNILEAVKPPFTADNRKKTIEKILRGKLILPPYL 56
++ N ++ A + + + + T +++ L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT---THISLDHHSMT-------L 298
Query: 57 TPD-ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI-------------NWSDVLS 102
TPD + L+ K L + Q L P E + +P SI NW V
Sbjct: 299 TPDEVKSLLLKYLDCRP-QDL---PR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 103 RKLEPPFKPSLTGED---------DVSQF--DTKFTRQT-------PVDSPDESLLSESA 144
KL + SL + +S F + S ++++
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 145 N--LVFQG---FTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSG 199
LV + T PS+ E+ R YN +P
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALH--RSIVDHYNIPKTFDSDDLIPPY-- 468
Query: 200 MSG------GHHVDQQRSGGGDP----------FL---VCSGGGIPAGASSP-------- 232
+ GHH+ FL + AS
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH-DSTAWNASGSILNTLQQL 527
Query: 233 -FYRA--TTNNHRVHRTLNTELKYSP 255
FY+ N+ + R +N L + P
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLP 553
Score = 40.6 bits (94), Expect = 4e-04
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 41/154 (26%)
Query: 23 RNILEAVKPPFTADNRKKTIEKILRGKL-------ILPPYLTPDARELIRKL---LKRQV 72
++IL + F + K ++ + + L I+ ++ DA +L L +
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII---MSKDAVSGTLRLFWTLLSK- 74
Query: 73 AQRLGSGPNDGEAVRVHPFFRSI---NWSDVLSRKLEPPFKPSLTGEDDVSQFDTKF--- 126
E + V F + N+ ++S +PS+ + Q D +
Sbjct: 75 ----------QEEM-VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 127 --------TRQTPVDSPDESL--LSESANLVFQG 150
+R P ++L L + N++ G
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Score = 34.4 bits (78), Expect = 0.037
Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 30/146 (20%)
Query: 53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS-INWSDVLSRKLEPPFKP 111
+ +R+LLK + + + +V + K F
Sbjct: 223 IKLRIHSIQAELRRLLKS----------------KPYE--NCLLVLLNVQNAKAWNAFNL 264
Query: 112 S-----LTGEDDVSQF-DTKFTRQTPVDSPDESL-LSESANLVFQGFTYVAPSVL-EEMH 163
S T V+ F T +D +L E +L + P L E+
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLKYLDCRPQDLPREVL 323
Query: 164 HDKPRIVK--ARSPRKETSSYNYYLK 187
PR + A S R ++++ +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKH 349
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 51.2 bits (123), Expect = 1e-07
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF N ++++ GK ++ DA++LIRK+L + R+
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 50.4 bits (121), Expect = 2e-07
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE 84
+ ++ P + ++ + L + L+ + R ++ +L+ R + E
Sbjct: 248 VACNMELPHGGEGWQQLRQGYLPPEF--TAGLSSELRSVLVMMLEPDPKLRATA-----E 300
Query: 85 AVRVHPFFR 93
A+ P R
Sbjct: 301 ALLALPVLR 309
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 50.5 bits (121), Expect = 2e-07
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF N ++K+ +GK ++ A++LIRK+L + R+
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 274
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 50.1 bits (120), Expect = 2e-07
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF N + I+K+ +GK ++ +A+ELI+ +L +R
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRC 294
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 50.0 bits (120), Expect = 2e-07
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + +K+ ++P +L+P A+ LIR+++ QR+ + +R P+
Sbjct: 207 PFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITI-----QEIRRDPW 261
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDD 118
F L L P + + D
Sbjct: 262 FNV-----NLPDYLRPMEEVQGSYADS 283
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 49.6 bits (119), Expect = 3e-07
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF D +++T+ + + A++ IR+LL + +R+ +
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM-----TIQDS 269
Query: 87 RVHPFFRSINWSDVLSRK 104
HP+ + + LSRK
Sbjct: 270 LQHPWIKPKDTQQALSRK 287
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 49.7 bits (119), Expect = 3e-07
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 30 KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF ++ + K+ +GK ++ A++LI+++L+ +R+
Sbjct: 234 YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI 284
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 48.8 bits (117), Expect = 5e-07
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF N ++++ GK ++ DA++LIRK+L + R+
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 48.4 bits (116), Expect = 6e-07
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF ++ +KI G +P YL L+ +L+ +R + +R H +
Sbjct: 210 PFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATI-----KDIREHEW 264
Query: 92 FR 93
F+
Sbjct: 265 FK 266
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 48.3 bits (116), Expect = 7e-07
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PPF +++ + +I G P +TP+A+ LI +L +R+ + +
Sbjct: 205 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA-----DQA 259
Query: 87 RVHPFFRS 94
P+ +
Sbjct: 260 LKVPWICN 267
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 47.6 bits (114), Expect = 1e-06
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF ++ + I G LP +L+P A LI+++L R+ + +
Sbjct: 211 PFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISI-----HEIMQDDW 265
Query: 92 FR 93
F+
Sbjct: 266 FK 267
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 47.4 bits (113), Expect = 2e-06
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 42 IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR-SINWSDV 100
+E+ + + P ++ + L+ LL+ +R E + P+ +N +D
Sbjct: 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRT-----TLEKLVTDPWVTQPVNLADY 287
Query: 101 LSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESA 144
++ KP +S + ++ D L
Sbjct: 288 TWEEVFRVNKPE---SGVLSAASLEMGNRSLSDVAQAQELCGGE 328
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 47.3 bits (113), Expect = 2e-06
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PPF +++ + +I G P +TP+A+ LI +L +R+ + +
Sbjct: 228 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA-----DQA 282
Query: 87 RVHPFFRS 94
P+ +
Sbjct: 283 LKVPWICN 290
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 47.3 bits (113), Expect = 2e-06
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 43 EKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLS 102
E+I+RG++ ++ + + LIR L + + R E ++ HP+ + + +
Sbjct: 253 EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDVLLPQETA 307
Query: 103 RKLEPPFKPS 112
P
Sbjct: 308 EIHLHSLSPG 317
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 47.3 bits (113), Expect = 2e-06
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF +++ + ++I G P +TP+A++LI K+L ++R+
Sbjct: 211 PPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 260
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 46.9 bits (112), Expect = 2e-06
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF + ++ IL +L P +++PD LIR+ L + + R E + + P+
Sbjct: 238 PF--ERDQE----ILEAELHFPAHVSPDCCALIRRCLAPKPSSRP-----SLEEILLDPW 286
Query: 92 FRSINWSDVLSRKLEPP 108
++ L+ P
Sbjct: 287 MQTPAEDVPLNPSKGGP 303
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 46.9 bits (112), Expect = 2e-06
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 31 PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PPF+ + ++ ++I GK ++ A +L++KLL R + E
Sbjct: 217 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-----EE 271
Query: 86 VRVHPFFRS 94
HP+ +
Sbjct: 272 ALRHPWLQD 280
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 47.1 bits (112), Expect = 2e-06
Identities = 30/229 (13%), Positives = 60/229 (26%), Gaps = 45/229 (19%)
Query: 32 PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
PF D+ +KI G P YL P L++ +L+ +R + +R H +
Sbjct: 215 PFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATI-----KDIREHEW 269
Query: 92 FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
F+ + L P D+ L E
Sbjct: 270 FK---------QDLPKYLFPEDPSYSS--------------TMIDDEALKE--------- 297
Query: 152 TYVAPSVLEEMHHDKPRIVKARSPRKETSSY--NYYLKPHHHHGLPQQSGMSGGHHVDQQ 209
V E+ + ++ R Y+L + + +
Sbjct: 298 ------VCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDS 351
Query: 210 RSGGGDPFLVCSGGGIPAGASSPFYRATTNNHRVHRTLNTELKYSPEMM 258
A +P R T + ++ + ++ + +
Sbjct: 352 FLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHL 400
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 46.8 bits (112), Expect = 2e-06
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP-PY---LTPDARELIRKLLKRQVAQRL 76
PPF + K EKI G P+ ++ A++ I LL++ +R
Sbjct: 205 PPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERY 254
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 45.6 bits (109), Expect = 5e-06
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF + +++T+ I + A++ IR+LL + +R+
Sbjct: 209 SPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 45.9 bits (109), Expect = 5e-06
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PPF + + I+ G+ + ++LI +LL+ RL + E
Sbjct: 303 PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA-----EQA 357
Query: 87 RVHPFF 92
HPFF
Sbjct: 358 LQHPFF 363
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 45.7 bits (109), Expect = 5e-06
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 28 AVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
A+ PPFTA ++K+ KI GK +P + + E+I ++L + R P+ E +
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR----PSVEEIL 266
Query: 87 RVHPFFR 93
+P
Sbjct: 267 E-NPLIL 272
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 45.5 bits (108), Expect = 8e-06
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 31 PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PPF+ + ++ ++I GK ++ A +L++KLL R E
Sbjct: 342 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF-----TTEE 396
Query: 86 VRVHPFFRS 94
HP+ +
Sbjct: 397 ALRHPWLQD 405
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 45.3 bits (108), Expect = 8e-06
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF D +++T+ I + + A++ IRKLL ++ +RL
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 45.0 bits (107), Expect = 8e-06
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
Query: 31 PPFTADNRKKTI-------EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSG 79
PF + +R T +KI +G ++ +A++LI+ LL +RL
Sbjct: 207 VPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM- 265
Query: 80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFT 127
+R + + + + S + S L P +G + F
Sbjct: 266 ----SGLRYNEWLQ--DGSQLSSNPLMTPDILGSSGAAVHTCVKATFH 307
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 45.0 bits (107), Expect = 9e-06
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF D +++T+ I + A++ IRKLL ++ +RL +
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL-----TIQEA 270
Query: 87 RVHPFFRSINWSDVLSRKLE 106
HP+ ++ + R+
Sbjct: 271 LRHPWITPVDTQQAMVRRES 290
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 44.5 bits (106), Expect = 1e-05
Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF A+ ++ IE I+ + ++ +A + + +LL ++ R+
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM 250
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 45.2 bits (107), Expect = 1e-05
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF +N +T+ + + ++ D ++ IRKLL R+
Sbjct: 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM 403
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 44.3 bits (105), Expect = 2e-05
Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF ++ +T++ + R ++P+A++ I+ LL+++ +RL
Sbjct: 248 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 44.2 bits (105), Expect = 2e-05
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF ++ ++T I + + ++ A + I+ LL + +R
Sbjct: 231 SPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP 280
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 43.9 bits (104), Expect = 2e-05
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF DN +T+ IL + L ++ +A+E I KLL ++ + R+
Sbjct: 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRI 335
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 43.5 bits (103), Expect = 3e-05
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 9/122 (7%)
Query: 28 AVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
+K F A + K + KI+ G + + + D R L+ +L KR R P+ +
Sbjct: 220 TLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDR----PSVNSIL 275
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKF---TRQTPVDSPDESLLSES 143
F + + + F + K + + P + + +
Sbjct: 276 E-KGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPA 334
Query: 144 AN 145
A
Sbjct: 335 AK 336
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 43.4 bits (103), Expect = 3e-05
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 31 PPFTA---DNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
PF D ++ + +I GK L ++ A++L+ K+L QRL +
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTA----- 272
Query: 84 EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSE 142
V HP+ +W + +L P L + + Q+PV P S L++
Sbjct: 273 ALVLRHPWIV--HWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRSTLAQ 330
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 42.6 bits (101), Expect = 5e-05
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 32 PFTADNRKKTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
PF + KI L P P + D ++LI ++L + R+ +++H
Sbjct: 239 PFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV-----PEIKLH 293
Query: 90 PFFR 93
P+
Sbjct: 294 PWVT 297
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 42.7 bits (101), Expect = 6e-05
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 31 PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF +++ +I G+ P ++ + + LIR LLK + QR+
Sbjct: 196 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 249
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 42.7 bits (101), Expect = 6e-05
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 30 KPPF-TADNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
K PF N+ + I+ + P D +++++ LKR QR+ +
Sbjct: 236 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPEL 290
Query: 87 RVHPFFR 93
HP+ +
Sbjct: 291 LAHPYVQ 297
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 42.4 bits (100), Expect = 7e-05
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 30 KPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
K PF N+ + I+ + P D +++++ LKR QR+ +
Sbjct: 217 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PEL 271
Query: 87 RVHPFFR 93
HP+ +
Sbjct: 272 LAHPYVQ 278
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 42.5 bits (100), Expect = 8e-05
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 14/72 (19%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPY-------LTPDARELIRKLLKRQVAQRLGSGPND 82
K PF ++ I+RG L L +A +LI +++ +R
Sbjct: 237 KHPF--GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP-----T 289
Query: 83 GEAVRVHPFFRS 94
V HP F
Sbjct: 290 AMKVLRHPLFWP 301
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 41.9 bits (99), Expect = 9e-05
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 27 EAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
E + TA K + G + + L++KLL ++ R PN E +
Sbjct: 213 ELLHVCDTAFETSKFFTDLRDGII--SDIFDKKEKTLLQKLLSKKPEDR----PNTSEIL 266
Query: 87 RVHPFFR 93
R
Sbjct: 267 R-TLTVW 272
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 41.6 bits (98), Expect = 1e-04
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Query: 25 ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
+ E + P T R +T+ + K L P +++ +L +R P
Sbjct: 220 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMER----PEAI 275
Query: 84 EAVRVHPFFRSIN 96
+ + F ++
Sbjct: 276 NIIE-NAVFEDLD 287
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 41.6 bits (98), Expect = 1e-04
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 31 PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF +++ +I G+ P ++ + + LIR LLK + QR+
Sbjct: 261 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 314
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 41.1 bits (97), Expect = 2e-04
Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 31 PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF ++ E I++GK + +++ A++L+R++L A+R+ EA+
Sbjct: 231 LPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV----YEAL 285
Query: 87 RVHPFFRS-------INWSDVLSR 103
HP+ + I+ + + +
Sbjct: 286 N-HPWLKERDRYAYKIHLPETVEQ 308
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 41.3 bits (97), Expect = 2e-04
Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 32/180 (17%)
Query: 30 KPPFTADNRKKTIEKILRGKLILP---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
PF +++ + L + ARELI K++ +R + V
Sbjct: 227 SHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP-----SAKHV 281
Query: 87 RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
HPFF S L ++L+ DVS K + D P L
Sbjct: 282 LKHPFFWS------LEKQLQFF--------QDVSDRIEKESL----DGPIVKQLERGGRA 323
Query: 147 VFQG--FTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGH 204
V + + + ++ K R K S R + K HH+ LP + + G
Sbjct: 324 VVKMDWRENITVPLQTDL--RKFRTYKGGSVRDLLRAMRN--KKHHYRELPAEVRETLGT 379
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 40.8 bits (96), Expect = 2e-04
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 31 PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PF + + + +IL + ++ +A++L+RKL+ +RL
Sbjct: 248 EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 40.4 bits (95), Expect = 3e-04
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 15/120 (12%)
Query: 32 PFTADNR----KKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
PF +KTI++IL K +P ++P+ LI ++ A R+
Sbjct: 217 PFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISI-----PE 271
Query: 86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESAN 145
++ H +F ++ + + S E + Q ++ ++ + +
Sbjct: 272 IKTHSWFL----KNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLD 327
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 40.3 bits (94), Expect = 3e-04
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 31 PPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
T R + I + K +L P +++ +L +R P + + +
Sbjct: 272 SFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER----PEATDIIE-N 326
Query: 90 PFFRSI 95
F ++
Sbjct: 327 AIFENL 332
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 40.2 bits (94), Expect = 3e-04
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 30 KPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
K PF N+ + I+ + P D +++++ LKR QR+ +
Sbjct: 264 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPEL 318
Query: 87 RVHPFFR 93
HP+ +
Sbjct: 319 LAHPYVQ 325
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 40.0 bits (94), Expect = 4e-04
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 31 PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
PPF ++ + +I G+ P ++ DA++LIR LLK +RL
Sbjct: 227 PPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL 280
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.4 bits (94), Expect = 4e-04
Identities = 35/198 (17%), Positives = 54/198 (27%), Gaps = 52/198 (26%)
Query: 25 ILEAVKPPFTADNRKKT-IEKILRGKLI------LPPYLTPDARELIRKLLKRQVAQRLG 77
IL F AD+ T E L GK + + P +++ L L
Sbjct: 40 ILPEPTEGFAADDEPTTPAE--LVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLE 97
Query: 78 SGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQ--FDTKFTRQTPVDSP 135
ND +H L+ KL +L ++ + + + P D
Sbjct: 98 G--ND-----IH----------ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKK 140
Query: 136 DESLLSESAN-------LVF--QGFT--YVAPSVLEEM--------HHDKPRIVKARSPR 176
S L + +F QG T Y EE+ I +
Sbjct: 141 SNSALFRAVGEGNAQLVAIFGGQGNTDDY-----FEELRDLYQTYHVLVGDLIKFSAETL 195
Query: 177 KETSSYNYYLKPHHHHGL 194
E + GL
Sbjct: 196 SELIRTTLDAEKVFTQGL 213
Score = 35.4 bits (81), Expect = 0.017
Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 47/152 (30%)
Query: 4 LRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILP-------PYL 56
LRKA KA L+ + PF+ RK R LP L
Sbjct: 393 LRKA------------KAPSG-LDQSRIPFSE--RKLKFS--NRF---LPVASPFHSHLL 432
Query: 57 TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE 116
P + + + L+K V+ + + +++ P + + + SD+ R L +
Sbjct: 433 VPASDLINKDLVKNNVSF-------NAKDIQI-PVYDTFDGSDL--RVLSGSISERIV-- 480
Query: 117 DDVSQFDTKFTRQTPVDSPDESLLSESANLVF 148
D + R PV + + L F
Sbjct: 481 DCI-------IRL-PVKWETTTQFKATHILDF 504
Score = 33.9 bits (77), Expect = 0.054
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 37/152 (24%)
Query: 22 ERNILE-----AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
E LE A+ +N +++ K ++ Y+T AR + ++ ++ L
Sbjct: 92 ENCYLEGNDIHALAAKLLQENDTT----LVKTKELIKNYIT--ARIMAKRPFDKKSNSAL 145
Query: 77 GSGPNDGEAVRVHPFF----RSINWSDVLSRKL---EPPFKPSLTGE---------DDVS 120
+G A ++ F + ++ + L R L L
Sbjct: 146 FRAVGEGNA-QLVAIFGGQGNTDDYFEEL-RDLYQTYHVLVGDLIKFSAETLSELIRTTL 203
Query: 121 QFDTKFTR--------QTPVDSPDESLLSESA 144
+ FT+ + P ++PD+ L
Sbjct: 204 DAEKVFTQGLNILEWLENPSNTPDKDYLLSIP 235
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 37.6 bits (88), Expect = 0.002
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 30/98 (30%)
Query: 31 PPFTADNRKKTI---------------EKILRGKLILP----PYLTPDARELIRKLLKRQ 71
PPF E I GK P +++ A++LI KLL R
Sbjct: 224 PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD 283
Query: 72 VAQRLGSGPNDGEAVRVHPFFR------SINWSDVLSR 103
QRL + V HP+ + ++ VL R
Sbjct: 284 AKQRLSA-----AQVLQHPWVQGCAPENTLPTPMVLQR 316
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 37.3 bits (87), Expect = 0.003
Identities = 7/50 (14%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 30 KPPFTADNRK-KTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRL 76
+ P+ +K ++ ++ +L +P + +L+ ++ QR
Sbjct: 243 EGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRP 292
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 36.5 bits (85), Expect = 0.006
Identities = 13/118 (11%), Positives = 32/118 (27%), Gaps = 13/118 (11%)
Query: 32 PF-TADNRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV 88
P+ + + K L P + L+ K+L + R+ ++
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI-----PDIKK 261
Query: 89 HPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
++ L + + P S + S F + + + +
Sbjct: 262 DRWYNK-----PLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASRTPGSGW 314
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 35.0 bits (80), Expect = 0.019
Identities = 11/75 (14%), Positives = 18/75 (24%), Gaps = 14/75 (18%)
Query: 30 KPPFTADN--RKKTIEKILRGKLILPPY-------LTPDARELIRKLLKRQVAQRLGSGP 80
PF K + ++ L + LI + L +RL
Sbjct: 290 FLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP-- 347
Query: 81 NDGEAVRVHPFFRSI 95
P F +
Sbjct: 348 ---LEAMETPEFLQL 359
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 34.7 bits (80), Expect = 0.021
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 30 KPPFTADNRKKTIEKILRGKLILPPYLT--PDARELIRKLLKRQVAQRL 76
+ PF +I+ GK +PP+ T LIR +L+ +RL
Sbjct: 250 QHPFEDGA----KLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERL 294
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 34.2 bits (79), Expect = 0.027
Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 28 AVKPPFTAD--NRKKTIEKILRGKL--ILPPYLTPDARELIRKLLKRQVAQR 75
A++ PF D N +KI + + + + + R+L+ + +R
Sbjct: 231 ALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 34.2 bits (79), Expect = 0.030
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 25 ILEAV--KPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPN 81
++ A +P + +I +G+L +P L+ + EL++ ++ +R P+
Sbjct: 221 VVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERR----PS 273
Query: 82 DGEAVRVHPFFRSI 95
V+ H S
Sbjct: 274 AMALVK-HSVLLSA 286
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 34.1 bits (79), Expect = 0.032
Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 13/80 (16%)
Query: 32 PF-TADNRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV 88
P+ + + K L P+ + L+ K+L + R+ ++
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI-----PDIKK 261
Query: 89 HPFFRSINWSDVLSRKLEPP 108
++ L + + P
Sbjct: 262 DRWYNK-----PLKKGAKRP 276
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 32.1 bits (73), Expect = 0.15
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 45/161 (27%)
Query: 30 KPPF----TADNRKKTIEKILRGKLI-------------------------LPPYLTPDA 60
PF K+ + KI+ GK L L
Sbjct: 220 SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLL 279
Query: 61 RELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS------DVLSRKLEPPFKPSLT 114
++ +L+ + G FF + V S + K +
Sbjct: 280 TPVLANILEADQEKCWG----------FDQFFAETSDILHRMVIHVFSLQQMTAHKIYIH 329
Query: 115 GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVA 155
+ + F +QT + S ++ L+ E LV +
Sbjct: 330 SYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQ 370
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 30.3 bits (69), Expect = 0.63
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
P L+ +L +K L +R E + H FF+ +++ S++L+ +
Sbjct: 277 PKLSEVVIDLAKKCLHIDPDKRPFC----AELLH-HDFFQMDGFAERFSQELQLKVQK 329
>2keq_A DNA polymerase III alpha subunit, nucleic acid binding OB-fold
tRNA/helicase-type...; intein, DNAE intein, protein
splicing; HET: DNA; NMR {Nostoc punctiforme pcc 73102}
Length = 139
Score = 28.8 bits (64), Expect = 0.82
Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 15/75 (20%)
Query: 34 TADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGP--------NDGEA 85
T + I KI+ + I + D + + VAQ G DG
Sbjct: 12 TVEYGLLPIGKIVEKR-IECTVYSVDNN---GNIYTQPVAQWHDRGEQEVFEYCLEDGSL 67
Query: 86 VRV---HPFFRSINW 97
+R H F
Sbjct: 68 IRATKDHKFMTVDGQ 82
>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphory
oligonucleotides, glycosylated protein; HET: NAG ADS
THS; 1.80A {Penicillium citrinum} SCOP: a.124.1.2
Length = 270
Score = 29.1 bits (64), Expect = 1.2
Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS------INWSDVLSRKLEPP 108
Y++P+A + +L + L S + + R+ + I+ D
Sbjct: 16 YVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVD 75
Query: 109 FKPSLTGEDDVSQFDTKFTRQ 129
++ +T++
Sbjct: 76 YERDCGSSGCSISAIANYTQR 96
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 29.2 bits (66), Expect = 1.2
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 30 KPPFT-ADNRKKTIEKILRGKLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
KPPF + + K+ K+ +P ++ +A+ I K + +R + +
Sbjct: 222 KPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR----ACANDLL 277
Query: 87 RVHPFFRSINWSDVLSRKL 105
F + + KL
Sbjct: 278 V-DEFLKVSSKKKKTQPKL 295
>3sng_A Nuclease; mainly alpha helical, trinuclear metal centre,
3'-nucleotidase, nucleic acids, mononucleotid cytosol
membrane associated; HET: NAG BMA MAN BTB; 2.16A
{Solanum lycopersicum}
Length = 277
Score = 29.2 bits (64), Expect = 1.3
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT 114
L +A ++ LL V L + + VR ++ W+ L P +
Sbjct: 16 LLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYK---WTSPLHFIDTPDKACNFD 72
Query: 115 GEDD 118
E D
Sbjct: 73 YERD 76
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 28.7 bits (65), Expect = 1.6
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPP 108
P ++ A L++ L +RL + + HP+F +I + L+++ + P
Sbjct: 255 PNISYPALGLLKGCLHMDPTERLTC----EQLLH-HPYFENIREIEDLAKEHDKP 304
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP;
2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB:
3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A*
3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Length = 525
Score = 29.1 bits (65), Expect = 1.8
Identities = 11/63 (17%), Positives = 19/63 (30%)
Query: 168 RIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFLVCSGGGIPA 227
I+K R Y + + H + P + + + S G GGG
Sbjct: 221 EILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFK 280
Query: 228 GAS 230
+
Sbjct: 281 DSI 283
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl
carrier protein FA structural genomics, PSI, protein
structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Length = 88
Score = 26.6 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 53 PPYLTPDARELIRKLLKRQVAQRLGSGPND 82
+ P + E I+ L Q AQ+L P+D
Sbjct: 4 MKTIQPASVEDIQSWLIDQFAQQLDVDPDD 33
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment);
malaria, structural genomics, structural genomics
consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Length = 180
Score = 27.6 bits (62), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 6/28 (21%)
Query: 47 RGKLIL------PPYLTPDARELIRKLL 68
+G LIL P LTP+ ++LI++ L
Sbjct: 152 KGDLILEFDICFPKSLTPEQKKLIKEAL 179
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 28.0 bits (63), Expect = 3.1
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 51 ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI 95
+L L + +L+ +L+ +R+ + A+ HP+F
Sbjct: 286 VLGALLDDEGLDLLTAMLEMDPVKRISA----KNALE-HPYFSHN 325
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens}
PDB: 3agy_A 3agz_A 2qld_A
Length = 181
Score = 27.2 bits (61), Expect = 3.8
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 6/28 (21%)
Query: 47 RGKLIL------PPYLTPDARELIRKLL 68
RG LI+ P + +R ++ ++L
Sbjct: 152 RGDLIIEFEVIFPERIPQTSRTVLEQVL 179
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 27.3 bits (61), Expect = 4.5
Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 8/67 (11%)
Query: 30 KPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
+ P++ I + + P+ +E+I +++ +R + + +
Sbjct: 226 EYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER----YSIKDLL 281
Query: 87 RVHPFFR 93
H FF+
Sbjct: 282 N-HAFFQ 287
>3nnr_A Transcriptional regulator, TETR family; TETR-family transcriptional
regulator, structural genomics, center for structural
genomics, JCSG; HET: MSE; 2.49A {Marinobacter aquaeolei}
Length = 228
Score = 27.3 bits (60), Expect = 4.9
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 36 DNRKKTIEKILRGKL----ILPPYLTPDARELIRKLLKR 70
+ ++ ++ +G + PYLTP+ RE + L ++
Sbjct: 174 EPASLSLTELKQGIYQVLTLEVPYLTPEYRERVLALREK 212
>4a17_K L29, RPL27A, 60S ribosomal protein L27A; eukaryotic ribosome,
ribosome, eukaryotic initiation factor 60S, translation,
large ribosomal subunit; 3.52A {Tetrahymena thermophila}
PDB: 4a1a_K 4a1c_K 4a1e_K
Length = 149
Score = 27.0 bits (59), Expect = 4.9
Identities = 11/51 (21%), Positives = 16/51 (31%)
Query: 168 RIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFL 218
+ K R R S + + H G G +GG H + P
Sbjct: 4 HLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGY 54
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 27.2 bits (61), Expect = 5.0
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 20/82 (24%)
Query: 54 PYLTPDARELIRKLL-----KRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPP 108
P + P +L++++L KR A+ EA+ HP+ ++ + D EP
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAK---------EALE-HPYLQT--YHDPND---EPE 320
Query: 109 FKPSLTGEDDVSQFDTKFTRQT 130
+P + + T +
Sbjct: 321 GEPIPPSFFEFDHYKEALTTKD 342
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine
salvage pathway, amino-acid biosynthesis, isomerase,
magnesium, metal- binding; 2.30A {Bacillus subtilis}
Length = 425
Score = 27.3 bits (60), Expect = 5.2
Identities = 9/102 (8%), Positives = 26/102 (25%), Gaps = 11/102 (10%)
Query: 164 HDKPRIVKARSPRKET-SSYNYYLKPHHHHG-LPQQSGMSGGHHVDQQRSGGGDPFLVCS 221
PR + + + ++ + S V G ++ +
Sbjct: 312 LFPSPYGSVALPRADALAIHEECVREDAFNQTFAVPSAGIHPGMVPLLMRDFGIDHIINA 371
Query: 222 GGGIPAGASSPFYRATTNNHRV-------HRTLNTELKYSPE 256
GGG+ + R + ++ + + +
Sbjct: 372 GGGVHGHPNGAQGGGRAF--RAIIDAVLEAQPIDEKAEQCKD 411
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 27.1 bits (61), Expect = 6.2
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN 96
L +L+ K+LK QR+ + +A+ H +F+ N
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITA----KQALE-HAYFKENN 288
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 27.1 bits (61), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN 96
P L R+L++ LLK QR+ + EA++ HP+F
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISA----EEALQ-HPYFSDFC 290
>3rh2_A Hypothetical TETR-like transcriptional regulator; DNA/RNA-binding
3-helical bundle, structural genomics, joint for
structural genomics; 2.42A {Shewanella amazonensis}
Length = 212
Score = 26.8 bits (59), Expect = 6.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 45 ILRGKLILPPYLTPDARELIRKLLKR 70
+LR +I Y TPD+ +L +
Sbjct: 181 LLRVLMIFKAYSTPDSLANFDRLEQH 206
>2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase,
thioestera DD-peptidase; 1.50A {Synechococcus elongatus}
PDB: 2jbf_A* 2j7v_A 2j8y_A*
Length = 298
Score = 27.0 bits (60), Expect = 6.5
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 40 KTIEKILRGKLILPPYLTPDARELIRKLLKRQVA-QRLGSG 79
+ KI +G++ L+P +R+ + +++R V L +G
Sbjct: 174 TLMLKIGQGEI-----LSPRSRDRLLDIMRRTVTNTLLPAG 209
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 26.8 bits (60), Expect = 6.6
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN 96
P L D +L+ KLL+ + R+ E HPFF S+
Sbjct: 252 PRLDSDGADLLTKLLQFEGRNRI-----SAEDAMKHPFFLSLG 289
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 26.7 bits (60), Expect = 6.9
Identities = 8/43 (18%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN 96
P + +L+ +L +R+ + +A+ HP+F+ ++
Sbjct: 271 PGFCQEGIDLLSNMLCFDPNKRISA----RDAMN-HPYFKDLD 308
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 26.8 bits (60), Expect = 7.3
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS 112
+ ++L+ K L A+R+ + HP+F+ + PP + +
Sbjct: 267 TDIDELGKDLLLKCLTFNPAKRI-----SAYSALSHPYFQDLERCKENLDSHLPPSQNT 320
>2dew_X Protein-arginine deiminase type IV; histone modification enzyme,
hydrolase; 2.10A {Homo sapiens} SCOP: b.2.9.1 b.6.1.6
d.126.1.5 PDB: 2dex_X 2dey_X 3b1u_A* 3b1t_A* 2dw5_A*
3apn_A 3apm_A 1wda_A* 1wd9_A* 1wd8_A 4dkt_A*
Length = 671
Score = 27.0 bits (59), Expect = 8.2
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 29 VKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ 74
V PP T ++ + +IL G P + + ++ L Q Q
Sbjct: 420 VSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQ 465
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 26.5 bits (59), Expect = 8.7
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 51 ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF---RSINWSDVLSRKLEP 107
+ P PDA +LI +LL+ + RL HPFF R+ R+L P
Sbjct: 289 VFRPRTPPDAIDLISRLLEYTPSARL-----TAIEALCHPFFDELRTGEARMPNGRELPP 343
Query: 108 PF 109
F
Sbjct: 344 LF 345
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,077,810
Number of extensions: 250870
Number of successful extensions: 1047
Number of sequences better than 10.0: 1
Number of HSP's gapped: 951
Number of HSP's successfully gapped: 161
Length of query: 258
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 166
Effective length of database: 4,133,061
Effective search space: 686088126
Effective search space used: 686088126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.4 bits)