Query psy10250
Match_columns 387
No_of_seqs 249 out of 2133
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 21:42:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eiv_A Deoxyribose-phosphate a 100.0 2.8E-74 9.6E-79 556.0 26.7 246 121-386 17-285 (297)
2 1p1x_A Deoxyribose-phosphate a 100.0 5.5E-71 1.9E-75 529.7 25.4 242 123-385 5-250 (260)
3 2a4a_A Deoxyribose-phosphate a 100.0 1.7E-70 6E-75 530.4 24.8 240 127-386 29-278 (281)
4 3r12_A Deoxyribose-phosphate a 100.0 1.5E-67 5.2E-72 504.3 25.8 215 128-384 41-255 (260)
5 3ndo_A Deoxyribose-phosphate a 100.0 4.5E-67 1.5E-71 494.4 24.7 213 128-382 11-227 (231)
6 3ngj_A Deoxyribose-phosphate a 100.0 4.6E-67 1.6E-71 496.2 23.8 213 128-382 25-237 (239)
7 1vcv_A Probable deoxyribose-ph 100.0 2E-65 6.9E-70 482.3 21.7 216 130-380 1-226 (226)
8 3oa3_A Aldolase; structural ge 100.0 4.9E-65 1.7E-69 492.9 23.6 223 122-383 50-272 (288)
9 1ub3_A Aldolase protein; schif 100.0 1.1E-62 3.6E-67 462.5 23.8 212 129-382 2-213 (220)
10 1n7k_A Deoxyribose-phosphate a 100.0 6.8E-59 2.3E-63 439.9 20.9 210 128-386 18-232 (234)
11 1mzh_A Deoxyribose-phosphate a 100.0 2.2E-47 7.5E-52 358.9 25.1 210 129-382 3-212 (225)
12 4eiv_A Deoxyribose-phosphate a 100.0 7E-34 2.4E-38 274.6 10.3 113 1-115 91-206 (297)
13 3r12_A Deoxyribose-phosphate a 100.0 4.3E-33 1.5E-37 266.3 12.0 108 1-110 102-209 (260)
14 3ngj_A Deoxyribose-phosphate a 100.0 1.4E-32 4.7E-37 260.3 12.2 108 1-110 86-193 (239)
15 3ndo_A Deoxyribose-phosphate a 100.0 8.7E-33 3E-37 260.7 10.8 113 1-115 71-187 (231)
16 1p1x_A Deoxyribose-phosphate a 100.0 2.3E-32 8E-37 262.0 10.3 110 1-110 76-186 (260)
17 1w8s_A FBP aldolase, fructose- 100.0 4.5E-32 1.5E-36 260.4 10.0 199 131-381 20-236 (263)
18 1vcv_A Probable deoxyribose-ph 100.0 1.4E-31 4.9E-36 251.8 11.8 107 1-110 58-174 (226)
19 3oa3_A Aldolase; structural ge 100.0 2.4E-31 8.2E-36 257.4 12.4 108 1-110 117-224 (288)
20 2a4a_A Deoxyribose-phosphate a 100.0 7.4E-32 2.5E-36 260.7 8.5 109 1-110 97-208 (281)
21 1ub3_A Aldolase protein; schif 100.0 6.6E-31 2.3E-35 246.6 12.3 108 1-110 62-169 (220)
22 1n7k_A Deoxyribose-phosphate a 100.0 1.2E-28 4.2E-33 233.0 10.2 104 1-109 79-184 (234)
23 1mzh_A Deoxyribose-phosphate a 99.9 2E-21 6.7E-26 182.2 11.8 108 1-110 61-168 (225)
24 2qjg_A Putative aldolase MJ040 99.7 2.3E-18 7.7E-23 164.1 5.7 191 128-362 26-232 (273)
25 3glc_A Aldolase LSRF; TIM barr 99.4 1.7E-12 5.8E-17 126.4 13.7 228 85-361 16-251 (295)
26 1w8s_A FBP aldolase, fructose- 99.4 1.1E-13 3.9E-18 132.4 4.9 89 1-95 84-180 (263)
27 1qap_A Quinolinic acid phospho 99.2 4.1E-11 1.4E-15 116.7 11.5 133 199-377 143-283 (296)
28 1yxy_A Putative N-acetylmannos 99.1 2.5E-10 8.7E-15 105.9 10.9 173 140-362 28-210 (234)
29 2jbm_A Nicotinate-nucleotide p 98.9 4.6E-10 1.6E-14 109.4 5.4 130 212-377 138-275 (299)
30 3c2e_A Nicotinate-nucleotide p 98.9 1E-09 3.5E-14 106.8 6.1 127 211-376 139-279 (294)
31 2b7n_A Probable nicotinate-nuc 98.9 6.1E-10 2.1E-14 107.2 4.0 131 211-377 122-260 (273)
32 3glc_A Aldolase LSRF; TIM barr 98.9 3.7E-09 1.3E-13 102.9 8.3 77 14-94 129-209 (295)
33 1jub_A Dihydroorotate dehydrog 98.3 5.3E-06 1.8E-10 80.1 13.3 138 216-362 103-266 (311)
34 2qjg_A Putative aldolase MJ040 98.3 2.7E-07 9.4E-12 87.3 3.7 80 10-94 99-186 (273)
35 1f76_A Dihydroorotate dehydrog 98.2 3.8E-05 1.3E-09 75.0 16.5 123 230-362 163-313 (336)
36 2e6f_A Dihydroorotate dehydrog 98.2 1.1E-05 3.7E-10 78.0 12.2 136 217-362 104-268 (314)
37 3zwt_A Dihydroorotate dehydrog 98.0 9.8E-05 3.4E-09 73.7 16.0 133 219-362 163-322 (367)
38 3b0p_A TRNA-dihydrouridine syn 98.0 0.00013 4.5E-09 72.0 16.2 127 218-352 69-216 (350)
39 3khj_A Inosine-5-monophosphate 97.9 0.00012 4.1E-09 72.9 13.6 117 222-362 107-231 (361)
40 3oix_A Putative dihydroorotate 97.7 0.00026 8.7E-09 70.2 12.9 135 217-362 139-299 (345)
41 1ep3_A Dihydroorotate dehydrog 97.7 0.00018 6E-09 68.9 11.1 128 222-362 113-265 (311)
42 1vrd_A Inosine-5'-monophosphat 97.7 0.00039 1.3E-08 71.3 14.3 119 222-363 239-365 (494)
43 1y0e_A Putative N-acetylmannos 97.6 0.0018 6.3E-08 58.8 16.1 175 141-362 18-199 (223)
44 2nli_A Lactate oxidase; flavoe 97.6 0.00093 3.2E-08 66.5 14.9 92 249-362 213-308 (368)
45 3r2g_A Inosine 5'-monophosphat 97.6 0.0024 8.1E-08 63.6 16.9 115 222-362 102-223 (361)
46 4ef8_A Dihydroorotate dehydrog 97.5 0.00025 8.7E-09 70.4 9.7 121 230-362 153-301 (354)
47 3igs_A N-acetylmannosamine-6-p 97.5 0.0007 2.4E-08 63.2 12.2 174 141-373 31-211 (232)
48 2nzl_A Hydroxyacid oxidase 1; 97.4 0.0016 5.3E-08 65.5 13.4 95 249-362 236-331 (392)
49 3q58_A N-acetylmannosamine-6-p 97.4 0.0025 8.6E-08 59.4 13.6 174 141-373 31-211 (229)
50 3ffs_A Inosine-5-monophosphate 97.4 0.0013 4.5E-08 66.3 12.4 117 222-362 146-270 (400)
51 1eep_A Inosine 5'-monophosphat 97.3 0.0033 1.1E-07 62.9 14.5 118 222-362 155-280 (404)
52 1gox_A (S)-2-hydroxy-acid oxid 97.3 0.0021 7.3E-08 63.8 13.0 92 253-362 213-304 (370)
53 1tv5_A Dhodehase, dihydroorota 97.3 0.0049 1.7E-07 62.9 15.7 86 268-362 300-397 (443)
54 3usb_A Inosine-5'-monophosphat 97.3 0.033 1.1E-06 57.6 22.0 119 222-363 258-384 (511)
55 1to3_A Putative aldolase YIHT; 97.2 0.0023 7.8E-08 62.2 12.2 187 144-362 46-249 (304)
56 3i65_A Dihydroorotate dehydrog 97.2 0.0015 5.2E-08 66.1 11.1 105 249-362 232-369 (415)
57 3f4w_A Putative hexulose 6 pho 97.2 0.0018 6.3E-08 58.3 10.0 111 224-362 69-182 (211)
58 1zfj_A Inosine monophosphate d 97.1 0.0039 1.3E-07 63.7 13.3 123 222-363 235-361 (491)
59 1jcn_A Inosine monophosphate d 97.1 0.0098 3.4E-07 61.3 15.9 118 222-362 257-382 (514)
60 1p0k_A Isopentenyl-diphosphate 97.1 0.0085 2.9E-07 58.6 14.7 120 230-374 138-282 (349)
61 3sgz_A Hydroxyacid oxidase 2; 97.1 0.0019 6.5E-08 64.1 9.7 87 254-362 206-296 (352)
62 4avf_A Inosine-5'-monophosphat 97.1 0.0084 2.9E-07 61.8 14.9 118 222-362 231-356 (490)
63 3hgj_A Chromate reductase; TIM 97.0 0.0096 3.3E-07 58.6 14.4 126 223-353 156-308 (349)
64 4fo4_A Inosine 5'-monophosphat 97.0 0.0081 2.8E-07 59.8 13.7 115 223-362 111-235 (366)
65 1gte_A Dihydropyrimidine dehyd 97.0 0.011 3.8E-07 65.9 15.9 129 222-362 651-811 (1025)
66 1ypf_A GMP reductase; GUAC, pu 97.0 0.012 4E-07 57.6 14.2 121 223-364 109-236 (336)
67 1z41_A YQJM, probable NADH-dep 96.9 0.014 4.8E-07 57.1 14.3 131 221-361 146-301 (338)
68 4fxs_A Inosine-5'-monophosphat 96.9 0.011 3.6E-07 61.1 14.0 118 222-362 233-358 (496)
69 3l5l_A Xenobiotic reductase A; 96.9 0.0051 1.7E-07 60.9 10.9 126 223-353 162-315 (363)
70 2c6q_A GMP reductase 2; TIM ba 96.8 0.014 4.7E-07 57.7 13.3 118 223-363 121-248 (351)
71 3qja_A IGPS, indole-3-glycerol 96.8 0.01 3.4E-07 56.8 11.9 116 224-374 127-244 (272)
72 1wa3_A 2-keto-3-deoxy-6-phosph 96.8 0.015 5E-07 52.1 12.1 149 143-362 19-173 (205)
73 3vkj_A Isopentenyl-diphosphate 96.7 0.0051 1.7E-07 61.3 9.7 119 230-362 148-291 (368)
74 3gr7_A NADPH dehydrogenase; fl 96.7 0.034 1.2E-06 54.5 15.1 126 223-353 148-297 (340)
75 1vcf_A Isopentenyl-diphosphate 96.6 0.0061 2.1E-07 59.4 8.9 113 232-362 145-280 (332)
76 1kbi_A Cytochrome B2, L-LCR; f 96.6 0.017 5.8E-07 59.9 12.7 91 254-362 332-427 (511)
77 3c2e_A Nicotinate-nucleotide p 96.6 0.0015 5E-08 63.3 4.3 76 7-95 144-227 (294)
78 1qap_A Quinolinic acid phospho 96.5 0.0016 5.4E-08 63.2 4.3 78 4-95 151-236 (296)
79 1ydn_A Hydroxymethylglutaryl-C 96.5 0.1 3.4E-06 49.8 16.9 193 140-373 20-237 (295)
80 3fok_A Uncharacterized protein 96.4 0.048 1.6E-06 53.0 13.9 175 143-361 68-267 (307)
81 2jbm_A Nicotinate-nucleotide p 96.4 0.0017 5.7E-08 63.1 3.4 75 8-95 143-225 (299)
82 3sr7_A Isopentenyl-diphosphate 96.3 0.05 1.7E-06 54.1 14.0 121 224-362 159-302 (365)
83 2gou_A Oxidoreductase, FMN-bin 96.3 0.034 1.2E-06 55.1 12.6 126 219-353 161-312 (365)
84 1nvm_A HOA, 4-hydroxy-2-oxoval 96.3 0.49 1.7E-05 46.2 20.8 207 72-319 28-245 (345)
85 1vhn_A Putative flavin oxidore 96.3 0.018 6.1E-07 55.7 10.3 125 218-362 70-208 (318)
86 3l5a_A NADH/flavin oxidoreduct 96.3 0.058 2E-06 54.5 14.3 125 223-353 174-338 (419)
87 1xm3_A Thiazole biosynthesis p 96.3 0.045 1.6E-06 51.7 12.6 127 214-373 74-208 (264)
88 1to3_A Putative aldolase YIHT; 96.2 0.022 7.6E-07 55.2 10.6 80 14-96 112-199 (304)
89 1me8_A Inosine-5'-monophosphat 96.2 0.054 1.9E-06 55.8 13.9 120 225-362 247-376 (503)
90 2qr6_A IMP dehydrogenase/GMP r 96.2 0.055 1.9E-06 53.8 13.5 89 256-363 202-302 (393)
91 2ftp_A Hydroxymethylglutaryl-C 96.1 0.21 7E-06 48.0 16.7 193 140-373 24-241 (302)
92 3iv3_A Tagatose 1,6-diphosphat 96.1 0.15 5.2E-06 50.1 15.7 186 144-361 51-272 (332)
93 2b7n_A Probable nicotinate-nuc 96.0 0.0015 5E-08 62.6 1.0 76 7-95 127-210 (273)
94 3tsm_A IGPS, indole-3-glycerol 95.9 0.054 1.9E-06 51.8 11.2 117 224-374 134-251 (272)
95 1ydo_A HMG-COA lyase; TIM-barr 95.9 0.4 1.4E-05 46.3 17.5 130 210-361 147-286 (307)
96 1vyr_A Pentaerythritol tetrani 95.8 0.13 4.5E-06 50.8 13.9 126 219-353 161-313 (364)
97 1p4c_A L(+)-mandelate dehydrog 95.7 0.048 1.6E-06 54.3 10.2 85 254-362 214-302 (380)
98 2nv1_A Pyridoxal biosynthesis 95.6 0.096 3.3E-06 50.2 12.0 34 322-362 198-233 (305)
99 1rd5_A Tryptophan synthase alp 95.5 1 3.5E-05 41.8 18.2 35 321-362 191-225 (262)
100 1ps9_A 2,4-dienoyl-COA reducta 95.5 0.16 5.6E-06 53.6 14.1 129 220-353 142-300 (671)
101 3l0g_A Nicotinate-nucleotide p 95.4 0.055 1.9E-06 52.5 9.3 88 253-376 194-281 (300)
102 1xi3_A Thiamine phosphate pyro 95.3 0.24 8.1E-06 44.1 12.6 73 270-362 109-185 (215)
103 1h5y_A HISF; histidine biosynt 95.2 0.15 5E-06 46.2 11.1 60 289-362 160-222 (253)
104 3kru_A NADH:flavin oxidoreduct 95.2 0.4 1.4E-05 47.1 14.9 125 223-353 147-297 (343)
105 3tjx_A Dihydroorotate dehydrog 95.1 0.13 4.5E-06 50.3 11.1 131 227-374 150-308 (354)
106 1i4n_A Indole-3-glycerol phosp 95.0 0.12 4.1E-06 48.8 10.2 116 224-374 115-232 (251)
107 4e38_A Keto-hydroxyglutarate-a 95.0 0.075 2.6E-06 49.7 8.7 149 143-361 43-196 (232)
108 3ajx_A 3-hexulose-6-phosphate 95.0 0.12 4E-06 46.2 9.6 112 224-363 69-182 (207)
109 2r14_A Morphinone reductase; H 95.0 0.27 9.2E-06 48.8 13.1 127 219-353 166-318 (377)
110 3lab_A Putative KDPG (2-keto-3 94.9 0.064 2.2E-06 49.7 7.9 152 143-361 22-181 (217)
111 3ble_A Citramalate synthase fr 94.9 0.52 1.8E-05 46.0 14.8 203 131-373 20-251 (337)
112 1nvm_A HOA, 4-hydroxy-2-oxoval 94.7 0.56 1.9E-05 45.8 14.6 145 200-373 81-232 (345)
113 2ovl_A Putative racemase; stru 94.7 1.7 5.9E-05 42.4 18.1 154 201-381 133-287 (371)
114 3tqv_A Nicotinate-nucleotide p 94.6 0.13 4.4E-06 49.6 9.3 88 253-376 185-272 (287)
115 3jr2_A Hexulose-6-phosphate sy 94.4 0.034 1.2E-06 50.7 4.6 112 224-362 75-189 (218)
116 1ydo_A HMG-COA lyase; TIM-barr 94.4 2.3 7.9E-05 40.9 17.8 192 141-372 23-238 (307)
117 3vk5_A MOEO5; TIM barrel, tran 94.4 0.16 5.5E-06 48.9 9.3 175 137-362 43-251 (286)
118 4ab4_A Xenobiotic reductase B; 94.4 0.73 2.5E-05 45.6 14.5 117 223-353 157-298 (362)
119 2cw6_A Hydroxymethylglutaryl-C 94.2 3.9 0.00013 38.8 23.8 131 209-361 145-285 (298)
120 3gka_A N-ethylmaleimide reduct 94.2 0.54 1.8E-05 46.5 13.2 117 223-353 165-306 (361)
121 3nav_A Tryptophan synthase alp 94.2 0.44 1.5E-05 45.4 12.1 129 222-382 115-246 (271)
122 1vhc_A Putative KHG/KDPG aldol 94.0 0.13 4.5E-06 47.5 7.7 105 223-375 80-187 (224)
123 3aty_A Tcoye, prostaglandin F2 94.0 0.47 1.6E-05 47.1 12.2 120 222-353 177-326 (379)
124 1x1o_A Nicotinate-nucleotide p 93.9 0.3 1E-05 46.9 10.4 90 253-377 182-271 (286)
125 1mdl_A Mandelate racemase; iso 93.9 1.6 5.5E-05 42.3 15.7 152 201-381 133-285 (359)
126 2ekc_A AQ_1548, tryptophan syn 93.8 4.3 0.00015 37.8 18.0 34 321-362 196-229 (262)
127 2ftp_A Hydroxymethylglutaryl-C 93.7 4.9 0.00017 38.2 21.7 227 72-361 28-288 (302)
128 1icp_A OPR1, 12-oxophytodienoa 93.7 0.43 1.5E-05 47.4 11.4 126 220-353 168-320 (376)
129 3ivs_A Homocitrate synthase, m 93.7 1.5 5E-05 44.4 15.4 202 131-373 40-261 (423)
130 1yxy_A Putative N-acetylmannos 93.6 0.081 2.8E-06 48.3 5.5 84 1-98 79-165 (234)
131 1vzw_A Phosphoribosyl isomeras 93.5 0.46 1.6E-05 43.4 10.5 62 287-362 150-217 (244)
132 3paj_A Nicotinate-nucleotide p 93.5 0.43 1.5E-05 46.7 10.8 88 253-376 218-305 (320)
133 2hsa_B 12-oxophytodienoate red 93.4 0.69 2.4E-05 46.3 12.4 131 220-353 172-338 (402)
134 3ewb_X 2-isopropylmalate synth 93.3 3.4 0.00012 39.4 16.6 198 72-319 25-248 (293)
135 2pgw_A Muconate cycloisomerase 93.3 2.1 7.2E-05 42.0 15.5 139 216-381 146-286 (384)
136 3ozy_A Putative mandelate race 93.2 5.8 0.0002 39.1 18.7 152 202-381 139-292 (389)
137 1ea0_A Glutamate synthase [NAD 93.2 0.61 2.1E-05 53.8 12.8 100 250-362 977-1088(1479)
138 1vc4_A Indole-3-glycerol phosp 93.2 0.28 9.7E-06 46.1 8.6 115 224-374 120-238 (254)
139 2yw3_A 4-hydroxy-2-oxoglutarat 93.1 0.33 1.1E-05 44.1 8.7 100 223-362 74-174 (207)
140 3bw2_A 2-nitropropane dioxygen 93.0 1.7 6E-05 42.4 14.5 112 223-362 113-232 (369)
141 1qop_A Tryptophan synthase alp 92.9 0.39 1.3E-05 45.1 9.2 118 222-362 112-229 (268)
142 2czd_A Orotidine 5'-phosphate 92.9 0.46 1.6E-05 42.7 9.3 119 222-373 68-191 (208)
143 1ofd_A Ferredoxin-dependent gl 92.9 0.27 9.2E-06 56.9 9.3 100 250-362 1012-1123(1520)
144 1ka9_F Imidazole glycerol phos 92.9 2.1 7.1E-05 39.0 13.9 132 200-362 74-220 (252)
145 4a29_A Engineered retro-aldol 92.8 0.45 1.5E-05 45.1 9.3 118 223-374 117-235 (258)
146 1geq_A Tryptophan synthase alp 92.7 0.78 2.7E-05 41.9 10.8 115 222-362 98-215 (248)
147 1yad_A Regulatory protein TENI 92.7 2.3 7.7E-05 38.2 13.7 74 270-362 111-187 (221)
148 2v82_A 2-dehydro-3-deoxy-6-pho 92.7 0.23 7.9E-06 44.5 6.9 101 223-362 71-171 (212)
149 1wbh_A KHG/KDPG aldolase; lyas 92.6 0.24 8.3E-06 45.4 7.1 106 223-375 79-186 (214)
150 1o4u_A Type II quinolic acid p 92.5 0.092 3.2E-06 50.5 4.3 92 253-376 179-270 (285)
151 3gnn_A Nicotinate-nucleotide p 92.5 0.32 1.1E-05 47.1 8.1 88 253-376 196-283 (298)
152 1pii_A N-(5'phosphoribosyl)ant 92.5 0.64 2.2E-05 47.5 10.7 148 176-374 81-238 (452)
153 1ydn_A Hydroxymethylglutaryl-C 92.5 7.2 0.00025 36.7 18.8 188 72-308 24-237 (295)
154 4e5t_A Mandelate racemase / mu 92.2 4.1 0.00014 40.4 16.1 148 215-381 149-304 (404)
155 3k30_A Histamine dehydrogenase 92.2 0.61 2.1E-05 49.4 10.6 126 222-353 159-314 (690)
156 2og9_A Mandelate racemase/muco 92.0 6.1 0.00021 38.8 16.9 141 217-382 162-304 (393)
157 2gjl_A Hypothetical protein PA 91.9 1.1 3.9E-05 42.9 11.3 106 223-362 87-196 (328)
158 3fok_A Uncharacterized protein 91.9 0.4 1.4E-05 46.6 7.9 74 15-93 133-223 (307)
159 2cw6_A Hydroxymethylglutaryl-C 91.8 4.1 0.00014 38.7 15.0 138 222-372 83-237 (298)
160 4af0_A Inosine-5'-monophosphat 91.8 4.2 0.00014 42.4 15.9 134 201-363 269-409 (556)
161 3ble_A Citramalate synthase fr 91.8 5.3 0.00018 38.7 16.0 102 210-319 159-264 (337)
162 3vnd_A TSA, tryptophan synthas 91.8 1.4 4.6E-05 41.9 11.4 128 223-382 114-244 (267)
163 3iv3_A Tagatose 1,6-diphosphat 91.6 1.7 5.9E-05 42.6 12.3 130 15-156 115-268 (332)
164 1o94_A Tmadh, trimethylamine d 91.6 1.3 4.5E-05 47.2 12.4 129 220-353 150-311 (729)
165 3tdn_A FLR symmetric alpha-bet 91.5 0.49 1.7E-05 43.5 7.8 144 184-362 66-224 (247)
166 2ztj_A Homocitrate synthase; ( 91.5 4.6 0.00016 39.9 15.4 192 140-373 19-227 (382)
167 1qpo_A Quinolinate acid phosph 91.5 0.4 1.4E-05 46.0 7.4 91 253-376 181-271 (284)
168 3rcy_A Mandelate racemase/muco 91.4 5.4 0.00018 40.1 16.1 161 200-381 124-299 (433)
169 2qgy_A Enolase from the enviro 91.4 7.5 0.00026 38.1 16.9 140 216-381 148-290 (391)
170 2cu0_A Inosine-5'-monophosphat 91.4 1.7 5.7E-05 44.3 12.4 116 222-363 230-353 (486)
171 2y88_A Phosphoribosyl isomeras 91.3 1.2 4.2E-05 40.3 10.3 62 287-362 153-220 (244)
172 2z6i_A Trans-2-enoyl-ACP reduc 91.2 1.1 3.8E-05 43.3 10.4 103 225-362 81-186 (332)
173 2tps_A Protein (thiamin phosph 90.9 6.4 0.00022 35.0 14.6 60 292-362 132-195 (227)
174 2nql_A AGR_PAT_674P, isomerase 90.9 5.1 0.00017 39.3 15.1 149 201-380 152-302 (388)
175 1rqb_A Transcarboxylase 5S sub 90.9 1.4 4.7E-05 46.0 11.3 141 147-315 118-267 (539)
176 1tzz_A Hypothetical protein L1 90.9 6.1 0.00021 38.8 15.6 156 201-382 150-311 (392)
177 2rdx_A Mandelate racemase/muco 90.8 3.1 0.00011 40.7 13.3 139 215-381 143-282 (379)
178 2p10_A MLL9387 protein; putati 90.7 4.5 0.00015 38.8 13.8 84 278-377 169-263 (286)
179 2pp0_A L-talarate/galactarate 90.5 10 0.00034 37.4 16.8 141 217-382 175-317 (398)
180 2nx9_A Oxaloacetate decarboxyl 90.4 2.1 7.3E-05 43.7 12.1 140 147-316 101-249 (464)
181 1thf_D HISF protein; thermophI 90.3 2.2 7.6E-05 38.8 11.1 124 223-373 87-225 (253)
182 1nu5_A Chloromuconate cycloiso 90.3 7.6 0.00026 37.6 15.6 142 216-381 141-284 (370)
183 3bg3_A Pyruvate carboxylase, m 90.3 3.1 0.00011 44.8 13.7 132 175-316 212-353 (718)
184 3bo9_A Putative nitroalkan dio 90.2 4.7 0.00016 38.8 13.8 107 222-362 92-200 (326)
185 1rvk_A Isomerase/lactonizing e 90.2 7.8 0.00027 37.7 15.6 148 215-381 147-297 (382)
186 1mxs_A KDPG aldolase; 2-keto-3 90.1 0.22 7.5E-06 46.1 4.1 107 223-375 89-196 (225)
187 1jub_A Dihydroorotate dehydrog 89.9 1.1 3.7E-05 42.6 8.9 86 7-96 103-194 (311)
188 3gd6_A Muconate cycloisomerase 89.8 8.6 0.00029 37.9 15.7 153 201-381 127-283 (391)
189 3rmj_A 2-isopropylmalate synth 89.8 6.9 0.00023 38.6 14.9 198 72-319 32-255 (370)
190 2yzr_A Pyridoxal biosynthesis 89.8 3.4 0.00012 40.4 12.4 26 338-373 247-272 (330)
191 2gdq_A YITF; mandelate racemas 89.7 7.6 0.00026 38.0 15.1 155 201-382 123-282 (382)
192 1tkk_A Similar to chloromucona 89.6 7.3 0.00025 37.7 14.8 144 214-381 137-283 (366)
193 3ngf_A AP endonuclease, family 89.6 7.5 0.00026 35.3 14.1 135 202-353 10-173 (269)
194 1wbh_A KHG/KDPG aldolase; lyas 89.6 4.5 0.00015 36.7 12.4 118 202-364 16-133 (214)
195 2zbt_A Pyridoxal biosynthesis 89.5 1.2 3.9E-05 42.2 8.7 121 222-374 90-240 (297)
196 2hzg_A Mandelate racemase/muco 89.5 11 0.00037 37.1 16.1 156 200-381 132-292 (401)
197 3eeg_A 2-isopropylmalate synth 89.4 5.6 0.00019 38.5 13.7 148 209-374 140-293 (325)
198 2p8b_A Mandelate racemase/muco 89.3 3 0.0001 40.5 11.8 142 214-381 138-282 (369)
199 3dg3_A Muconate cycloisomerase 89.1 9.5 0.00033 37.1 15.3 153 200-382 127-281 (367)
200 1rpx_A Protein (ribulose-phosp 89.1 2.5 8.4E-05 38.2 10.3 115 223-362 82-202 (230)
201 3b0p_A TRNA-dihydrouridine syn 89.1 1.9 6.4E-05 42.1 10.1 85 10-96 70-166 (350)
202 3hq1_A 2-isopropylmalate synth 89.1 7.1 0.00024 41.5 15.1 224 5-316 88-327 (644)
203 3qze_A DHDPS, dihydrodipicolin 88.9 16 0.00055 35.0 16.5 145 201-353 26-197 (314)
204 2qde_A Mandelate racemase/muco 88.7 6.6 0.00023 38.6 13.9 150 201-381 134-285 (397)
205 3ewb_X 2-isopropylmalate synth 88.4 10 0.00034 36.1 14.5 190 142-373 23-235 (293)
206 3dxi_A Putative aldolase; TIM 88.4 3.6 0.00012 39.9 11.5 213 69-319 20-237 (320)
207 3bjs_A Mandelate racemase/muco 88.3 21 0.00072 35.5 17.4 154 201-381 171-326 (428)
208 3toy_A Mandelate racemase/muco 88.2 21 0.00071 35.0 19.4 154 200-382 155-310 (383)
209 1ujp_A Tryptophan synthase alp 88.2 0.9 3.1E-05 43.1 6.9 112 222-351 109-220 (271)
210 3tva_A Xylose isomerase domain 88.2 10 0.00035 34.6 14.0 120 224-353 26-172 (290)
211 3ceu_A Thiamine phosphate pyro 88.1 1.8 6E-05 39.0 8.5 74 281-377 97-175 (210)
212 3stp_A Galactonate dehydratase 88.1 17 0.00058 36.2 16.6 160 200-382 166-327 (412)
213 1vhc_A Putative KHG/KDPG aldol 87.8 7.8 0.00027 35.5 12.9 104 221-364 31-134 (224)
214 1wa3_A 2-keto-3-deoxy-6-phosph 87.8 4.4 0.00015 35.7 10.9 108 218-364 21-128 (205)
215 3rr1_A GALD, putative D-galact 87.6 17 0.00058 36.0 16.2 158 200-381 113-274 (405)
216 1mxs_A KDPG aldolase; 2-keto-3 87.5 7.2 0.00024 35.8 12.4 104 221-364 40-143 (225)
217 3jva_A Dipeptide epimerase; en 87.5 9.4 0.00032 37.0 14.0 144 213-381 135-279 (354)
218 2poz_A Putative dehydratase; o 87.3 11 0.00038 36.8 14.5 148 215-381 135-295 (392)
219 2qq6_A Mandelate racemase/muco 87.0 12 0.00043 36.8 14.8 146 217-381 149-306 (410)
220 2nx9_A Oxaloacetate decarboxyl 87.0 18 0.0006 36.9 16.1 150 200-372 78-238 (464)
221 1eye_A DHPS 1, dihydropteroate 86.8 22 0.00074 33.8 15.7 82 217-307 27-111 (280)
222 1rqb_A Transcarboxylase 5S sub 86.8 12 0.0004 39.0 14.8 149 200-371 95-256 (539)
223 3eez_A Putative mandelate race 86.7 6.6 0.00023 38.5 12.5 140 214-381 142-282 (378)
224 1tx2_A DHPS, dihydropteroate s 86.6 14 0.00048 35.4 14.4 98 201-307 39-146 (297)
225 2e6f_A Dihydroorotate dehydrog 86.6 1.3 4.5E-05 42.0 7.1 86 8-97 104-198 (314)
226 3i4k_A Muconate lactonizing en 86.5 22 0.00076 34.7 16.2 144 214-381 145-290 (383)
227 4e38_A Keto-hydroxyglutarate-a 86.4 8.5 0.00029 35.7 12.3 128 186-364 24-151 (232)
228 2bdq_A Copper homeostasis prot 85.9 4.6 0.00016 37.4 10.1 143 210-372 67-212 (224)
229 3q45_A Mandelate racemase/muco 85.8 22 0.00074 34.6 15.6 146 211-381 134-280 (368)
230 4dwd_A Mandelate racemase/muco 85.8 29 0.00098 34.2 16.7 147 215-381 137-286 (393)
231 4e4u_A Mandalate racemase/muco 85.7 24 0.00081 35.0 16.0 146 215-381 142-297 (412)
232 3sjn_A Mandelate racemase/muco 85.7 16 0.00053 35.7 14.5 142 219-382 148-291 (374)
233 3ro6_B Putative chloromuconate 85.5 8.8 0.0003 37.2 12.5 142 214-381 137-281 (356)
234 1tqx_A D-ribulose-5-phosphate 85.2 4.1 0.00014 37.5 9.4 88 270-372 115-206 (227)
235 3q58_A N-acetylmannosamine-6-p 84.9 16 0.00055 33.4 13.4 126 204-364 21-153 (229)
236 2o56_A Putative mandelate race 84.8 27 0.00094 34.1 15.9 146 217-381 152-311 (407)
237 2ps2_A Putative mandelate race 84.6 6.9 0.00023 38.0 11.3 148 201-381 135-284 (371)
238 2ekc_A AQ_1548, tryptophan syn 84.6 25 0.00086 32.5 21.1 127 4-156 25-171 (262)
239 3hgj_A Chromate reductase; TIM 84.5 11 0.00036 36.7 12.6 155 14-194 156-336 (349)
240 2gl5_A Putative dehydratase pr 84.5 21 0.00071 35.0 14.9 146 217-381 150-314 (410)
241 3ctl_A D-allulose-6-phosphate 84.4 2 6.9E-05 39.7 7.0 113 225-363 73-191 (231)
242 3ddm_A Putative mandelate race 84.4 19 0.00064 35.5 14.5 139 219-382 157-297 (392)
243 2qw5_A Xylose isomerase-like T 84.3 4.4 0.00015 38.2 9.6 119 173-301 42-212 (335)
244 1q6o_A Humps, 3-keto-L-gulonat 84.3 3 0.0001 37.4 8.0 47 321-373 151-197 (216)
245 1vli_A Spore coat polysacchari 84.2 35 0.0012 33.9 16.8 229 60-327 28-280 (385)
246 3igs_A N-acetylmannosamine-6-p 84.2 19 0.00065 32.9 13.6 126 204-364 21-153 (232)
247 2q02_A Putative cytoplasmic pr 84.1 16 0.00056 32.6 13.0 118 173-301 30-166 (272)
248 3tdn_A FLR symmetric alpha-bet 84.1 3.2 0.00011 37.9 8.2 64 285-362 37-103 (247)
249 3ngf_A AP endonuclease, family 84.1 20 0.00069 32.3 13.7 116 173-301 34-181 (269)
250 1hg3_A Triosephosphate isomera 84.0 25 0.00086 32.3 14.2 191 144-386 20-224 (225)
251 1qo2_A Molecule: N-((5-phospho 83.6 2.8 9.7E-05 38.0 7.6 134 185-353 62-208 (241)
252 3vzx_A Heptaprenylglyceryl pho 83.4 8.5 0.00029 35.6 10.8 65 281-362 138-203 (228)
253 4adt_A Pyridoxine biosynthetic 83.4 3.6 0.00012 39.5 8.5 122 222-373 90-239 (297)
254 2h6r_A Triosephosphate isomera 83.4 5.6 0.00019 36.1 9.5 159 178-375 37-202 (219)
255 2ox4_A Putative mandelate race 83.4 20 0.00069 35.0 14.3 147 217-382 146-306 (403)
256 1aj0_A DHPS, dihydropteroate s 83.1 32 0.0011 32.6 15.5 82 217-306 36-120 (282)
257 3mqt_A Mandelate racemase/muco 83.1 30 0.001 33.9 15.4 159 200-381 131-297 (394)
258 3go2_A Putative L-alanine-DL-g 83.1 24 0.00083 34.8 14.8 146 213-381 139-306 (409)
259 2uva_G Fatty acid synthase bet 83.1 14 0.00049 44.3 15.0 114 223-352 657-774 (2060)
260 1qtw_A Endonuclease IV; DNA re 83.0 7.4 0.00025 35.2 10.2 126 225-353 18-166 (285)
261 3rmj_A 2-isopropylmalate synth 83.0 31 0.001 33.9 15.3 190 142-373 30-242 (370)
262 3bg3_A Pyruvate carboxylase, m 82.9 22 0.00074 38.3 15.1 196 7-250 122-348 (718)
263 2wqp_A Polysialic acid capsule 82.8 38 0.0013 33.2 17.6 231 60-333 19-274 (349)
264 3kws_A Putative sugar isomeras 82.6 23 0.00078 32.2 13.5 137 201-353 25-186 (287)
265 2oz8_A MLL7089 protein; struct 82.6 38 0.0013 33.0 17.9 130 201-353 132-263 (389)
266 1jvn_A Glutamine, bifunctional 82.5 5.5 0.00019 41.3 10.1 62 287-362 456-521 (555)
267 3my9_A Muconate cycloisomerase 82.5 20 0.0007 34.8 13.8 144 215-382 144-288 (377)
268 2hxt_A L-fuconate dehydratase; 82.4 40 0.0014 33.5 16.2 142 216-381 197-339 (441)
269 4a3u_A NCR, NADH\:flavin oxido 82.3 18 0.0006 35.3 13.2 133 222-375 155-316 (358)
270 1vyr_A Pentaerythritol tetrani 82.3 4.1 0.00014 40.0 8.6 81 284-365 162-269 (364)
271 1tqj_A Ribulose-phosphate 3-ep 82.0 6 0.00021 36.1 9.2 114 225-363 78-197 (230)
272 1f6y_A 5-methyltetrahydrofolat 81.8 23 0.00078 33.1 13.3 134 217-374 23-169 (262)
273 3r0u_A Enzyme of enolase super 81.6 32 0.0011 33.7 14.8 144 213-382 138-285 (379)
274 2qf7_A Pyruvate carboxylase pr 81.5 5.3 0.00018 45.2 10.2 93 215-316 705-800 (1165)
275 2agk_A 1-(5-phosphoribosyl)-5- 81.4 12 0.00041 34.9 11.1 33 321-353 191-225 (260)
276 3mkc_A Racemase; metabolic pro 80.9 36 0.0012 33.4 15.0 139 221-381 161-302 (394)
277 3m5v_A DHDPS, dihydrodipicolin 80.8 39 0.0013 32.0 15.9 146 202-353 12-183 (301)
278 1i60_A IOLI protein; beta barr 80.7 25 0.00086 31.3 12.9 128 216-353 14-162 (278)
279 3ivs_A Homocitrate synthase, m 80.6 5.9 0.0002 40.0 9.2 78 14-91 114-197 (423)
280 3o63_A Probable thiamine-phosp 80.6 2 6.8E-05 40.0 5.4 68 281-362 144-214 (243)
281 3inp_A D-ribulose-phosphate 3- 80.5 2.2 7.4E-05 40.0 5.6 123 224-373 101-229 (246)
282 1z41_A YQJM, probable NADH-dep 80.5 6.2 0.00021 38.1 9.1 79 285-365 146-247 (338)
283 3qxb_A Putative xylose isomera 80.2 15 0.0005 34.2 11.4 122 173-302 46-210 (316)
284 2qdd_A Mandelate racemase/muco 79.9 17 0.00059 35.3 12.2 149 200-381 133-282 (378)
285 3v3w_A Starvation sensing prot 79.9 25 0.00084 35.0 13.5 157 200-381 137-322 (424)
286 1gte_A Dihydropyrimidine dehyd 79.9 14 0.00049 40.9 12.8 112 248-366 616-734 (1025)
287 3ovp_A Ribulose-phosphate 3-ep 79.8 6.2 0.00021 36.2 8.4 121 224-372 79-202 (228)
288 3khj_A Inosine-5-monophosphate 79.8 8 0.00027 38.0 9.7 92 249-365 79-171 (361)
289 3obe_A Sugar phosphate isomera 79.8 4.2 0.00014 38.2 7.5 108 147-277 37-171 (305)
290 3sbf_A Mandelate racemase / mu 79.6 32 0.0011 33.8 14.2 158 200-381 121-297 (401)
291 3eeg_A 2-isopropylmalate synth 79.0 22 0.00076 34.2 12.5 137 224-373 82-236 (325)
292 2yw3_A 4-hydroxy-2-oxoglutarat 78.3 19 0.00064 32.3 11.0 116 202-364 13-128 (207)
293 1wv2_A Thiazole moeity, thiazo 78.2 31 0.0011 32.6 12.8 123 213-362 81-211 (265)
294 3l5l_A Xenobiotic reductase A; 77.9 8.9 0.0003 37.5 9.4 155 14-194 162-343 (363)
295 1vrd_A Inosine-5'-monophosphat 77.9 6.1 0.00021 40.0 8.5 71 13-97 239-309 (494)
296 3cqj_A L-ribulose-5-phosphate 77.8 37 0.0013 30.9 13.2 148 201-353 16-184 (295)
297 1k77_A EC1530, hypothetical pr 77.7 11 0.00037 33.7 9.3 117 173-301 26-174 (260)
298 3ugv_A Enolase; enzyme functio 77.7 56 0.0019 32.0 15.3 143 216-382 170-316 (390)
299 3dx5_A Uncharacterized protein 77.6 29 0.00099 31.3 12.4 130 216-353 15-160 (286)
300 1vqt_A Orotidine 5'-phosphate 77.5 5.9 0.0002 35.9 7.5 133 209-384 63-209 (213)
301 3dip_A Enolase; structural gen 77.4 49 0.0017 32.7 14.8 141 222-382 161-311 (410)
302 3tha_A Tryptophan synthase alp 77.1 5.7 0.0002 37.3 7.4 109 225-352 109-218 (252)
303 2ehh_A DHDPS, dihydrodipicolin 77.1 49 0.0017 31.1 16.2 134 214-353 16-175 (294)
304 3cu2_A Ribulose-5-phosphate 3- 77.0 14 0.00046 34.2 9.9 129 222-372 82-222 (237)
305 2yxg_A DHDPS, dihydrodipicolin 77.0 49 0.0017 31.0 14.7 90 214-306 16-105 (289)
306 3nl6_A Thiamine biosynthetic b 76.9 25 0.00087 36.4 12.9 64 281-352 117-191 (540)
307 2q02_A Putative cytoplasmic pr 76.6 29 0.00098 31.0 11.9 129 213-353 16-159 (272)
308 1o5k_A DHDPS, dihydrodipicolin 76.5 53 0.0018 31.1 15.4 135 214-354 28-188 (306)
309 3l21_A DHDPS, dihydrodipicolin 76.4 53 0.0018 31.1 16.8 144 201-352 18-188 (304)
310 3zwt_A Dihydroorotate dehydrog 76.3 40 0.0014 33.0 13.6 134 11-153 164-318 (367)
311 3s5o_A 4-hydroxy-2-oxoglutarat 76.3 53 0.0018 31.1 14.6 139 209-353 24-190 (307)
312 3tji_A Mandelate racemase/muco 76.2 33 0.0011 34.1 13.2 158 200-381 142-318 (422)
313 3qc0_A Sugar isomerase; TIM ba 76.2 17 0.00057 32.5 10.2 120 224-353 23-166 (275)
314 1f76_A Dihydroorotate dehydrog 76.2 8.9 0.0003 36.7 8.7 71 21-96 163-247 (336)
315 3ktc_A Xylose isomerase; putat 76.2 16 0.00053 34.5 10.4 120 223-353 37-190 (333)
316 3vcn_A Mannonate dehydratase; 76.1 27 0.00091 34.8 12.5 157 200-381 138-323 (425)
317 3u0h_A Xylose isomerase domain 76.1 9.5 0.00033 34.3 8.5 119 173-301 27-175 (281)
318 3vni_A Xylose isomerase domain 75.8 11 0.00037 34.4 8.9 120 173-301 28-180 (294)
319 1ep3_A Dihydroorotate dehydrog 75.3 5.1 0.00017 37.5 6.6 78 13-96 113-198 (311)
320 1twd_A Copper homeostasis prot 75.2 18 0.00063 34.1 10.3 130 222-374 11-148 (256)
321 3gr7_A NADPH dehydrogenase; fl 75.2 12 0.00041 36.3 9.4 79 286-365 147-247 (340)
322 2w6r_A Imidazole glycerol phos 75.0 8.7 0.0003 35.1 8.0 68 288-374 161-231 (266)
323 3r4e_A Mandelate racemase/muco 75.0 41 0.0014 33.3 13.6 158 200-382 131-317 (418)
324 2fli_A Ribulose-phosphate 3-ep 74.8 3.9 0.00013 36.3 5.4 112 224-362 76-193 (220)
325 2yr1_A 3-dehydroquinate dehydr 74.8 37 0.0013 31.5 12.4 144 201-357 19-194 (257)
326 1xrs_A D-lysine 5,6-aminomutas 74.8 25 0.00084 35.8 11.5 81 268-351 151-249 (516)
327 2zad_A Muconate cycloisomerase 74.7 60 0.002 30.9 16.0 138 216-380 138-278 (345)
328 2v9d_A YAGE; dihydrodipicolini 74.5 64 0.0022 31.2 16.5 147 201-354 34-207 (343)
329 3p3b_A Mandelate racemase/muco 74.2 35 0.0012 33.3 12.7 145 219-383 150-301 (392)
330 1ps9_A 2,4-dienoyl-COA reducta 74.2 24 0.00081 36.9 12.1 133 12-155 143-302 (671)
331 1icp_A OPR1, 12-oxophytodienoa 74.0 6.7 0.00023 38.7 7.3 81 284-365 168-274 (376)
332 3r2g_A Inosine 5'-monophosphat 73.4 12 0.0004 37.0 8.9 70 13-96 102-171 (361)
333 3iwp_A Copper homeostasis prot 73.4 26 0.00088 33.6 11.0 199 60-365 37-236 (287)
334 1rvk_A Isomerase/lactonizing e 73.4 12 0.00041 36.3 9.0 82 280-364 148-231 (382)
335 2r14_A Morphinone reductase; H 72.8 8.4 0.00029 38.0 7.7 81 284-365 167-273 (377)
336 3qfe_A Putative dihydrodipicol 72.7 68 0.0023 30.6 15.7 147 201-353 13-189 (318)
337 1chr_A Chloromuconate cycloiso 72.6 71 0.0024 30.8 14.6 140 217-381 142-284 (370)
338 1i60_A IOLI protein; beta barr 72.3 26 0.00088 31.2 10.4 119 173-301 25-170 (278)
339 3si9_A DHDPS, dihydrodipicolin 72.1 69 0.0024 30.5 14.8 145 202-353 26-197 (315)
340 2x7v_A Probable endonuclease 4 71.9 32 0.0011 30.9 11.0 126 225-353 18-165 (287)
341 3aty_A Tcoye, prostaglandin F2 71.8 9.5 0.00033 37.7 7.9 78 287-365 178-284 (379)
342 1vr6_A Phospho-2-dehydro-3-deo 71.6 5.2 0.00018 39.4 5.8 190 138-387 16-212 (350)
343 2hk0_A D-psicose 3-epimerase; 71.1 16 0.00053 33.9 8.8 120 173-301 47-199 (309)
344 3gka_A N-ethylmaleimide reduct 71.1 11 0.00038 37.0 8.1 79 286-365 164-268 (361)
345 3s1x_A Probable transaldolase; 71.0 64 0.0022 29.6 15.5 164 142-362 7-183 (223)
346 3mwc_A Mandelate racemase/muco 70.9 35 0.0012 33.6 11.8 153 200-382 148-301 (400)
347 1twd_A Copper homeostasis prot 70.3 20 0.00069 33.7 9.3 192 63-365 2-196 (256)
348 3fkr_A L-2-keto-3-deoxyarabona 70.1 75 0.0026 30.1 15.2 95 209-306 18-113 (309)
349 3b4u_A Dihydrodipicolinate syn 70.0 73 0.0025 29.9 14.2 95 209-306 13-108 (294)
350 3kws_A Putative sugar isomeras 69.6 32 0.0011 31.2 10.5 121 173-301 49-194 (287)
351 2zvr_A Uncharacterized protein 69.2 17 0.00058 33.2 8.6 130 145-301 40-198 (290)
352 3f4w_A Putative hexulose 6 pho 69.1 7.1 0.00024 34.4 5.7 70 15-98 69-138 (211)
353 3l5a_A NADH/flavin oxidoreduct 69.1 19 0.00065 36.0 9.4 86 278-365 159-283 (419)
354 3lmz_A Putative sugar isomeras 69.0 37 0.0013 30.3 10.7 132 200-353 16-152 (257)
355 2v82_A 2-dehydro-3-deoxy-6-pho 69.0 59 0.002 28.4 11.8 119 200-362 5-123 (212)
356 3na8_A Putative dihydrodipicol 68.5 83 0.0028 29.9 17.8 146 201-353 27-199 (315)
357 3i6e_A Muconate cycloisomerase 68.4 69 0.0024 31.2 13.3 151 201-381 137-288 (385)
358 3iwp_A Copper homeostasis prot 68.4 50 0.0017 31.6 11.7 130 222-374 49-186 (287)
359 3daq_A DHDPS, dihydrodipicolin 68.3 79 0.0027 29.6 14.9 130 217-353 21-176 (292)
360 3tj4_A Mandelate racemase; eno 68.0 90 0.0031 30.2 18.3 142 217-382 151-294 (372)
361 4gj1_A 1-(5-phosphoribosyl)-5- 68.0 24 0.00081 32.4 9.2 128 222-351 34-214 (243)
362 2qf7_A Pyruvate carboxylase pr 67.9 1.1E+02 0.0036 34.7 16.1 197 7-250 570-795 (1165)
363 1w0m_A TIM, triosephosphate is 67.7 19 0.00065 33.1 8.4 157 179-375 41-205 (226)
364 2hk0_A D-psicose 3-epimerase; 67.6 75 0.0026 29.1 14.7 142 201-353 20-191 (309)
365 3o07_A Pyridoxine biosynthesis 67.2 11 0.00037 36.2 6.8 20 338-362 205-224 (291)
366 2wkj_A N-acetylneuraminate lya 67.2 85 0.0029 29.6 14.6 102 201-306 14-116 (303)
367 3d0c_A Dihydrodipicolinate syn 67.1 82 0.0028 29.9 13.2 144 201-353 14-181 (314)
368 1q7z_A 5-methyltetrahydrofolat 66.8 24 0.00081 36.8 9.9 135 217-375 338-483 (566)
369 3a5f_A Dihydrodipicolinate syn 66.7 47 0.0016 31.2 11.3 137 209-353 12-175 (291)
370 2hsa_B 12-oxophytodienoate red 66.6 20 0.00068 35.6 9.0 80 285-365 173-284 (402)
371 1sjd_A N-acylamino acid racema 66.6 62 0.0021 31.0 12.4 136 217-381 141-278 (368)
372 4dpp_A DHDPS 2, dihydrodipicol 66.6 60 0.0021 31.9 12.3 102 201-306 62-164 (360)
373 2z6i_A Trans-2-enoyl-ACP reduc 66.2 27 0.00094 33.3 9.6 107 226-366 30-136 (332)
374 3tr2_A Orotidine 5'-phosphate 65.4 54 0.0018 30.2 11.1 196 13-259 20-234 (239)
375 3kru_A NADH:flavin oxidoreduct 65.1 26 0.0009 34.0 9.4 77 287-365 147-247 (343)
376 2zvr_A Uncharacterized protein 64.9 47 0.0016 30.1 10.7 119 225-353 47-190 (290)
377 1k77_A EC1530, hypothetical pr 64.9 73 0.0025 28.0 14.3 124 215-353 14-166 (260)
378 1yx1_A Hypothetical protein PA 64.8 34 0.0012 30.7 9.6 116 224-355 28-151 (264)
379 4ab4_A Xenobiotic reductase B; 64.7 11 0.00037 37.1 6.5 78 287-365 157-260 (362)
380 2y88_A Phosphoribosyl isomeras 64.7 21 0.00073 31.9 8.1 61 287-362 35-98 (244)
381 2r91_A 2-keto-3-deoxy-(6-phosp 64.6 92 0.0031 29.0 16.5 130 214-352 14-166 (286)
382 4adt_A Pyridoxine biosynthetic 64.4 21 0.00073 34.1 8.4 111 223-362 32-147 (297)
383 3tfx_A Orotidine 5'-phosphate 64.4 93 0.0032 29.0 16.0 197 14-261 17-236 (259)
384 2qul_A D-tagatose 3-epimerase; 64.2 80 0.0027 28.2 13.6 123 225-353 23-173 (290)
385 2f6u_A GGGPS, (S)-3-O-geranylg 64.1 32 0.0011 31.8 9.2 51 322-385 180-230 (234)
386 4fo4_A Inosine 5'-monophosphat 63.4 39 0.0013 33.2 10.3 81 222-308 160-245 (366)
387 1qgu_B Protein (nitrogenase mo 63.0 69 0.0024 32.7 12.5 178 142-380 271-448 (519)
388 2i1o_A Nicotinate phosphoribos 63.0 38 0.0013 33.7 10.2 102 254-377 197-301 (398)
389 3hbl_A Pyruvate carboxylase; T 62.7 1.5E+02 0.005 33.5 16.0 241 7-306 552-822 (1150)
390 1zco_A 2-dehydro-3-deoxyphosph 62.6 20 0.00067 33.6 7.6 90 270-378 24-119 (262)
391 3l0g_A Nicotinate-nucleotide p 62.6 7.1 0.00024 37.7 4.6 75 13-110 217-292 (300)
392 2g0w_A LMO2234 protein; putati 62.5 59 0.002 29.7 11.0 113 173-301 47-180 (296)
393 3tr9_A Dihydropteroate synthas 62.5 19 0.00067 34.8 7.7 85 216-307 46-136 (314)
394 3bo9_A Putative nitroalkan dio 62.2 20 0.00069 34.3 7.8 106 225-364 43-148 (326)
395 1eye_A DHPS 1, dihydropteroate 62.2 27 0.00093 33.1 8.6 82 7-97 26-110 (280)
396 1sfl_A 3-dehydroquinate dehydr 62.0 33 0.0011 31.5 8.9 145 201-357 3-180 (238)
397 2htm_A Thiazole biosynthesis p 61.9 19 0.00065 34.2 7.3 60 288-362 137-202 (268)
398 3o1n_A 3-dehydroquinate dehydr 61.5 74 0.0025 29.9 11.5 98 217-329 117-218 (276)
399 3dx5_A Uncharacterized protein 61.4 40 0.0014 30.4 9.4 118 173-301 26-168 (286)
400 3lmz_A Putative sugar isomeras 61.4 25 0.00087 31.4 8.0 85 173-277 41-134 (257)
401 1xky_A Dihydrodipicolinate syn 61.3 1.1E+02 0.0037 28.8 14.4 145 201-353 15-186 (301)
402 1f6k_A N-acetylneuraminate lya 61.1 68 0.0023 30.1 11.2 91 5-98 19-110 (293)
403 1viz_A PCRB protein homolog; s 61.1 50 0.0017 30.5 10.0 34 322-362 172-205 (240)
404 2yxg_A DHDPS, dihydrodipicolin 61.0 43 0.0015 31.4 9.8 193 8-255 19-229 (289)
405 2rfg_A Dihydrodipicolinate syn 61.0 86 0.0029 29.5 11.9 95 209-306 11-105 (297)
406 4dye_A Isomerase; enolase fami 60.9 1.3E+02 0.0044 29.5 14.1 137 218-382 169-307 (398)
407 2wkj_A N-acetylneuraminate lya 60.8 61 0.0021 30.6 10.9 91 5-98 27-117 (303)
408 1eep_A Inosine 5'-monophosphat 60.7 25 0.00084 34.6 8.3 68 13-94 155-222 (404)
409 2qr6_A IMP dehydrogenase/GMP r 60.6 29 0.00099 33.9 8.8 94 249-366 140-238 (393)
410 3l21_A DHDPS, dihydrodipicolin 60.4 65 0.0022 30.5 11.0 196 4-255 30-243 (304)
411 4dxk_A Mandelate racemase / mu 60.3 63 0.0022 31.7 11.3 139 223-381 158-306 (400)
412 1zfj_A Inosine monophosphate d 60.3 19 0.00066 36.1 7.7 73 13-99 235-307 (491)
413 2r8w_A AGR_C_1641P; APC7498, d 60.3 1.2E+02 0.0042 29.0 13.8 95 209-306 44-139 (332)
414 2qul_A D-tagatose 3-epimerase; 60.2 19 0.00065 32.5 7.0 120 173-301 28-181 (290)
415 1o5k_A DHDPS, dihydrodipicolin 60.2 42 0.0014 31.8 9.6 88 8-98 31-118 (306)
416 1vzw_A Phosphoribosyl isomeras 60.1 23 0.00077 31.9 7.4 61 287-362 36-99 (244)
417 1f6y_A 5-methyltetrahydrofolat 60.0 24 0.00082 33.0 7.7 77 8-97 23-101 (262)
418 1h5y_A HISF; histidine biosynt 60.0 17 0.00057 32.3 6.4 67 285-362 35-101 (253)
419 2yci_X 5-methyltetrahydrofolat 60.0 1.1E+02 0.0038 28.5 14.4 133 218-374 33-178 (271)
420 2qiw_A PEP phosphonomutase; st 59.9 71 0.0024 29.7 10.9 88 209-300 85-185 (255)
421 1jcn_A Inosine monophosphate d 59.7 46 0.0016 33.7 10.4 69 13-96 257-326 (514)
422 2ehh_A DHDPS, dihydrodipicolin 59.5 46 0.0016 31.3 9.7 195 8-255 19-231 (294)
423 1f6k_A N-acetylneuraminate lya 59.5 1.1E+02 0.0039 28.5 14.3 95 209-306 13-109 (293)
424 4ef8_A Dihydroorotate dehydrog 59.1 18 0.0006 35.5 6.8 68 21-94 153-228 (354)
425 1zco_A 2-dehydro-3-deoxyphosph 58.9 1.1E+02 0.0039 28.3 17.0 218 61-326 24-258 (262)
426 2h9a_B CO dehydrogenase/acetyl 58.9 15 0.00053 35.4 6.3 133 219-372 74-214 (310)
427 3m47_A Orotidine 5'-phosphate 58.3 1.1E+02 0.0036 27.7 14.0 184 13-259 24-220 (228)
428 3m5v_A DHDPS, dihydrodipicolin 58.2 47 0.0016 31.3 9.6 198 5-255 23-238 (301)
429 3m0z_A Putative aldolase; MCSG 58.1 40 0.0014 31.4 8.5 88 224-325 150-246 (249)
430 2o56_A Putative mandelate race 58.0 54 0.0019 31.9 10.3 83 281-365 152-247 (407)
431 2poz_A Putative dehydratase; o 58.0 31 0.001 33.6 8.4 82 281-364 137-230 (392)
432 3flu_A DHDPS, dihydrodipicolin 58.0 1.2E+02 0.0042 28.3 14.0 138 209-353 17-181 (297)
433 3e96_A Dihydrodipicolinate syn 57.6 1.3E+02 0.0044 28.5 12.8 144 201-353 14-181 (316)
434 3qc0_A Sugar isomerase; TIM ba 57.6 18 0.00062 32.3 6.3 117 173-301 29-173 (275)
435 3eb2_A Putative dihydrodipicol 57.5 37 0.0013 32.1 8.7 138 209-353 14-178 (300)
436 3tak_A DHDPS, dihydrodipicolin 57.4 1.2E+02 0.0042 28.2 13.3 138 209-353 11-175 (291)
437 1xg4_A Probable methylisocitra 57.3 1.3E+02 0.0045 28.5 13.5 92 209-301 83-185 (295)
438 2ojp_A DHDPS, dihydrodipicolin 57.3 1.1E+02 0.0038 28.6 12.0 95 209-306 11-106 (292)
439 2hzg_A Mandelate racemase/muco 57.2 24 0.00081 34.6 7.5 79 280-364 144-226 (401)
440 2zds_A Putative DNA-binding pr 57.1 35 0.0012 31.6 8.4 70 284-353 112-197 (340)
441 1xla_A D-xylose isomerase; iso 57.0 66 0.0022 31.2 10.7 128 225-353 39-203 (394)
442 1vpx_A Protein (transaldolase 57.0 1.2E+02 0.0041 27.9 11.7 174 133-362 9-192 (230)
443 3cpr_A Dihydrodipicolinate syn 56.9 79 0.0027 29.8 10.9 91 5-98 32-122 (304)
444 3e96_A Dihydrodipicolinate syn 56.8 1.1E+02 0.0038 28.9 12.1 128 143-305 30-171 (316)
445 3dxi_A Putative aldolase; TIM 56.6 85 0.0029 30.1 11.2 184 140-373 18-224 (320)
446 3bw2_A 2-nitropropane dioxygen 56.4 38 0.0013 32.7 8.8 125 214-364 43-169 (369)
447 2r8w_A AGR_C_1641P; APC7498, d 56.4 70 0.0024 30.7 10.6 197 5-255 50-268 (332)
448 4hnl_A Mandelate racemase/muco 56.3 49 0.0017 32.6 9.7 156 200-381 141-317 (421)
449 2vc6_A MOSA, dihydrodipicolina 56.3 97 0.0033 29.0 11.4 139 209-353 11-175 (292)
450 3tva_A Xylose isomerase domain 56.3 1.1E+02 0.0037 27.5 11.5 118 173-301 32-180 (290)
451 1thf_D HISF protein; thermophI 56.2 61 0.0021 29.0 9.7 67 285-362 32-98 (253)
452 3qze_A DHDPS, dihydrodipicolin 55.9 69 0.0024 30.5 10.4 203 4-260 38-258 (314)
453 2gl5_A Putative dehydratase pr 55.9 39 0.0013 33.1 8.8 82 281-364 150-249 (410)
454 3aal_A Probable endonuclease 4 55.9 26 0.0009 32.2 7.2 126 225-353 24-170 (303)
455 3a5f_A Dihydrodipicolinate syn 55.8 75 0.0026 29.7 10.5 89 7-98 19-107 (291)
456 3b4u_A Dihydrodipicolinate syn 55.7 61 0.0021 30.5 9.9 91 5-98 19-109 (294)
457 3dz1_A Dihydrodipicolinate syn 55.6 1.4E+02 0.0048 28.2 14.4 101 201-306 11-112 (313)
458 1h1y_A D-ribulose-5-phosphate 55.6 37 0.0013 30.4 8.0 113 224-363 79-197 (228)
459 2gjl_A Hypothetical protein PA 55.5 38 0.0013 32.1 8.5 91 250-364 52-142 (328)
460 3dgb_A Muconate cycloisomerase 55.4 1.5E+02 0.0052 28.6 15.2 141 217-381 148-290 (382)
461 2bdq_A Copper homeostasis prot 55.4 32 0.0011 31.7 7.5 72 225-301 14-94 (224)
462 1tx2_A DHPS, dihydropteroate s 55.3 42 0.0014 32.1 8.7 88 2-97 53-145 (297)
463 3cqj_A L-ribulose-5-phosphate 55.0 58 0.002 29.5 9.4 120 173-302 41-193 (295)
464 3cpr_A Dihydrodipicolinate syn 54.8 1.4E+02 0.0048 28.1 14.8 102 201-306 19-121 (304)
465 3ijd_A Uncharacterized protein 54.8 35 0.0012 33.0 8.0 117 143-287 101-229 (315)
466 3d0c_A Dihydrodipicolinate syn 54.6 56 0.0019 31.1 9.5 91 4-98 27-117 (314)
467 2vp8_A Dihydropteroate synthas 54.6 31 0.0011 33.3 7.7 96 201-306 41-147 (318)
468 3aam_A Endonuclease IV, endoiv 54.1 95 0.0032 27.6 10.6 95 185-290 50-160 (270)
469 1muw_A Xylose isomerase; atomi 53.8 1.4E+02 0.0047 28.7 12.3 132 217-353 34-203 (386)
470 1w3i_A EDA, 2-keto-3-deoxy glu 53.8 1.4E+02 0.0049 27.8 15.6 135 209-352 9-167 (293)
471 3dz1_A Dihydrodipicolinate syn 53.8 1E+02 0.0035 29.2 11.2 90 4-97 23-112 (313)
472 4h3d_A 3-dehydroquinate dehydr 53.7 1.4E+02 0.0047 27.6 12.0 99 218-331 98-200 (258)
473 3usb_A Inosine-5'-monophosphat 53.6 58 0.002 33.2 9.9 67 13-93 258-324 (511)
474 3ffs_A Inosine-5-monophosphate 53.6 20 0.0007 35.7 6.4 64 287-366 147-211 (400)
475 3tcs_A Racemase, putative; PSI 53.6 1.7E+02 0.0057 28.5 18.5 145 218-381 147-295 (388)
476 3t6c_A RSPA, putative MAND fam 53.3 1.8E+02 0.0062 28.9 17.1 148 215-381 153-336 (440)
477 2ovl_A Putative racemase; stru 53.1 37 0.0013 32.8 8.1 75 281-364 146-222 (371)
478 1ypf_A GMP reductase; GUAC, pu 53.0 18 0.00061 34.8 5.7 94 249-364 79-174 (336)
479 3aam_A Endonuclease IV, endoiv 52.9 63 0.0022 28.8 9.2 120 224-353 19-160 (270)
480 4e4f_A Mannonate dehydratase; 52.7 94 0.0032 30.8 11.1 146 216-381 148-324 (426)
481 1sfl_A 3-dehydroquinate dehydr 52.6 1E+02 0.0035 28.1 10.6 97 217-326 81-181 (238)
482 1qop_A Tryptophan synthase alp 52.6 55 0.0019 30.2 8.8 85 213-302 25-128 (268)
483 2qgy_A Enolase from the enviro 52.4 51 0.0017 32.1 9.0 76 281-365 149-226 (391)
484 3vni_A Xylose isomerase domain 52.2 1.3E+02 0.0045 26.9 11.6 123 224-353 22-172 (294)
485 3u7q_B Nitrogenase molybdenum- 52.1 1.2E+02 0.0042 31.0 12.1 173 140-380 273-452 (523)
486 1xky_A Dihydrodipicolinate syn 52.0 96 0.0033 29.2 10.6 197 5-255 28-242 (301)
487 2gou_A Oxidoreductase, FMN-bin 51.8 32 0.0011 33.5 7.4 85 11-96 162-272 (365)
488 2qq6_A Mandelate racemase/muco 51.8 52 0.0018 32.2 9.0 82 281-364 149-241 (410)
489 4dpp_A DHDPS 2, dihydrodipicol 51.7 1E+02 0.0036 30.1 11.0 91 5-98 75-165 (360)
490 3ayv_A Putative uncharacterize 51.7 77 0.0026 27.9 9.5 118 224-353 15-151 (254)
491 3hbl_A Pyruvate carboxylase; T 51.3 91 0.0031 35.2 11.8 146 144-314 625-781 (1150)
492 3fkr_A L-2-keto-3-deoxyarabona 51.2 94 0.0032 29.4 10.4 91 5-98 24-114 (309)
493 3qja_A IGPS, indole-3-glycerol 51.1 1.2E+02 0.0041 28.3 11.0 110 223-363 76-185 (272)
494 3flu_A DHDPS, dihydrodipicolin 50.6 1E+02 0.0036 28.8 10.6 204 5-262 23-244 (297)
495 2uv8_G Fatty acid synthase sub 50.3 81 0.0028 38.0 11.6 114 223-352 664-781 (2051)
496 1ka9_F Imidazole glycerol phos 50.1 36 0.0012 30.5 7.0 67 285-362 33-99 (252)
497 1pii_A N-(5'phosphoribosyl)ant 49.9 46 0.0016 33.7 8.3 113 222-364 167-279 (452)
498 3m6y_A 4-hydroxy-2-oxoglutarat 49.9 20 0.00068 33.8 5.1 71 254-331 196-275 (275)
499 3oix_A Putative dihydroorotate 49.8 1.2E+02 0.004 29.4 11.0 115 239-365 101-222 (345)
500 1r0m_A N-acylamino acid racema 49.8 1.7E+02 0.0057 28.1 12.2 135 217-381 148-284 (375)
No 1
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=100.00 E-value=2.8e-74 Score=555.99 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=225.4
Q ss_pred hhhHHHHHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCC-
Q psy10250 121 KNKKSLLLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENAR- 199 (387)
Q Consensus 121 ~~~~~~~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~- 199 (387)
-++..+.++++++||||+|+|++|+++|+++|++|++ +|+|++|||||+||+++++.|+++ +
T Consensus 17 ~~~~~~~~~la~~IDhTlL~p~~T~e~I~~lc~eA~~---------------~~~~aaVCV~P~~V~~a~~~L~~~--~~ 79 (297)
T 4eiv_A 17 IYKQFTSRTLLNFFEVAALTDGETNESVAAVCKIAAK---------------DPAIVGVSVRPAFVRFIRQELVKS--AP 79 (297)
T ss_dssp HHHHHHHHHHHTTEEEEECSTTCCHHHHHHHHHHHHS---------------SSCCSEEEECGGGHHHHHHTGGGT--CG
T ss_pred ehhhhhHHHHHHhcCccCCCCCCCHHHHHHHHHHHHh---------------hcCcEEEEECHHHHHHHHHHhccc--Cc
Confidence 3566788999999999999999999999999999993 589999999999999999999863 2
Q ss_pred --CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhc---CChhHHHHHHHHHHHHhCCCcceEEEE
Q psy10250 200 --DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN---NQWPELFSEVKQMKEKCGEKIHMKTIL 274 (387)
Q Consensus 200 --~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~---g~~~~v~~Ei~~v~~~~~~~~~lKvIl 274 (387)
++++|||| ||||+|++++++|++|+++|+++||||||||||++++++ |+|++|++||++|+++|++ .+|||||
T Consensus 80 ~~s~v~V~tV-igFP~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~-~~lKVIl 157 (297)
T 4eiv_A 80 EVAGIKVCAA-VNFPEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGP-KTLKVVL 157 (297)
T ss_dssp GGGGSEEEEE-ESTTTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTT-SEEEEEC
T ss_pred CCCCCeEEEE-ecCCCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 57999999 599999999999999999999999999999999999999 9999999999999999976 7999999
Q ss_pred eeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHH---------------HHcCCCceEeEe
Q psy10250 275 AVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFH---------------KLSGKKIGLKPA 339 (387)
Q Consensus 275 Et~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~---------------~~~~~~~gIKas 339 (387)
||++|+++|.|++||++|+++|||||||||||+++|||++++++|++.|+.+. ..+++++|||||
T Consensus 158 Et~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs 237 (297)
T 4eiv_A 158 SGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIE 237 (297)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEE
T ss_pred ecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEec
Confidence 99999665558999999999999999999999999999999999999998763 234789999999
Q ss_pred -ccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccc-hHHHHHHHHhh
Q psy10250 340 -GGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS-LLNNILQELEA 386 (387)
Q Consensus 340 -GGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs-~~~il~~~~~~ 386 (387)
|||||++||+.|++++++ +|.+|++|++||||+|| +++.+..++|.
T Consensus 238 ~GGIrt~e~A~~~i~~~~e-lG~~wl~~~~fRiGaSs~ll~el~~~~~~ 285 (297)
T 4eiv_A 238 VGDVHMAETADFLMQMIFE-NGPRSIVRDKFRVGGGFNLLKELRDCYES 285 (297)
T ss_dssp CTTCCHHHHHHHHHHHHHH-HCGGGCSTTTEEEEECHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHH-hCccccCCCceEecccHHHHHHHHHHHhh
Confidence 999999999999999999 99999999999999998 77777777764
No 2
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=100.00 E-value=5.5e-71 Score=529.75 Aligned_cols=242 Identities=36% Similarity=0.544 Sum_probs=224.2
Q ss_pred hHHHHHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCC--CeEEEEECCccHHHHHHHhhhcCCCC
Q psy10250 123 KKSLLLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANV--HTAAVCVYPARVVDVIKVLDRENARD 200 (387)
Q Consensus 123 ~~~~~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~--~~~aVcV~P~~v~~a~~~L~~~~~~~ 200 (387)
..+.+++++++||||+|+|++|.++|+++|++|+ +| +|++|||||+||+++++.|++. ++
T Consensus 5 ~~~~~~~l~~~IDhTlL~p~~t~~~i~~lc~eA~----------------~~~~~~~aVcV~p~~v~~a~~~L~~~--g~ 66 (260)
T 1p1x_A 5 LKASSLRALKLMDLTTLNDDDTDEKVIALCHQAK----------------TPVGNTAAICIYPRFIPIARKTLKEQ--GT 66 (260)
T ss_dssp HHHHHHHHHTTEEEECCCTTCCHHHHHHHHHHTE----------------ETTEECSEEECCGGGHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHhchhcCCCCCCHHHHHHHHHHHH----------------hccCCceEEEECHHHHHHHHHHhhhc--CC
Confidence 3456788999999999999999999999999999 78 9999999999999999999832 25
Q ss_pred -CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEEeecc
Q psy10250 201 -DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGE 278 (387)
Q Consensus 201 -~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~ 278 (387)
+++||+| +|||+|++++++|++|+++|+++||||||||+|++++++|+|+++++||++|+++|++ +.++||||||++
T Consensus 67 ~~v~v~tV-igFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~ 145 (260)
T 1p1x_A 67 PEIRIATV-TNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGE 145 (260)
T ss_dssp TTSEEEEE-ESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHH
T ss_pred CCceEEEE-eCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEeccc
Confidence 7999999 5999999999999999999999999999999999999999999999999999999973 479999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
|+++|.|++||++|+++|||||||||||+++|||++++++|++.|+.+. ++.++|||+||||||++||+.|+.+..+.
T Consensus 146 L~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~--~g~~v~VKaaGGIrt~~~al~~i~aga~~ 223 (260)
T 1p1x_A 146 LKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMG--VEKTVGFKPAGGVRTAEDAQKYLAIADEL 223 (260)
T ss_dssp HCSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHT--CTTTCEEECBSSCCSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhc--CCCCceEEEeCCCCCHHHHHHHHHhhhhh
Confidence 9554438899999999999999999999999999999999988887764 68899999999999999999999999999
Q ss_pred cCCCccCCCcceeeccchHHHHHHHHh
Q psy10250 359 LGPDWLNKDLFRIGASSLLNNILQELE 385 (387)
Q Consensus 359 ~Ga~w~~~~~~RIGtSs~~~il~~~~~ 385 (387)
+|.+|++|++|||||||++++|.++|+
T Consensus 224 lG~~w~~~~~~RiGtS~~~~~i~~~~~ 250 (260)
T 1p1x_A 224 FGADWADARHYRFGASSLLASLLKALG 250 (260)
T ss_dssp HCTTSCSTTTBCEEESTHHHHHHHHHT
T ss_pred ccccccccCceEeecchhHHHHHHHhc
Confidence 999999999999999999997777765
No 3
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=100.00 E-value=1.7e-70 Score=530.42 Aligned_cols=240 Identities=32% Similarity=0.429 Sum_probs=218.5
Q ss_pred HHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCC--CeEEEEECCccHHHHHHHhhhcCCCC--Cc
Q psy10250 127 LLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANV--HTAAVCVYPARVVDVIKVLDRENARD--DV 202 (387)
Q Consensus 127 ~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~--~~~aVcV~P~~v~~a~~~L~~~~~~~--~v 202 (387)
.++++++||||+|+|++|.++|+++|++|+ +| +|++|||||+||+++++.|++. ++ ++
T Consensus 29 ~~~l~~~IDhTlL~p~~T~~dI~~lc~eA~----------------~~~~~~aaVCV~p~~V~~a~~~L~~~--gs~~~v 90 (281)
T 2a4a_A 29 AWSVICLTDHTFLDENGTEDDIRELCNESV----------------KTCPFAAAVCVYPKFVKFINEKIKQE--INPFKP 90 (281)
T ss_dssp HHHHHTTEEEECCCTTCCHHHHHHHHHHHH----------------SSSSCCSEEEECGGGHHHHHHHHHHH--SSSCCS
T ss_pred HHHHHHHcchhcCCCCCCHHHHHHHHHHHH----------------hccCCccEEEECHHHHHHHHHHhhcc--CCCCCc
Confidence 578999999999999999999999999999 78 9999999999999999999831 25 79
Q ss_pred eEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChh---HHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 203 KVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWP---ELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 203 ~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~---~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
+||+| +|||+|++++++|++|+++|+++||||||||+|++++++|+|+ ++++||++|+++|++ .++||||||++|
T Consensus 91 ~v~tV-igFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L 168 (281)
T 2a4a_A 91 KIACV-INFPYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTN-KILKVIIEVGEL 168 (281)
T ss_dssp EEEEE-ESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTT-SEEEEECCHHHH
T ss_pred eEEEE-eCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcC-CceEEEEecccC
Confidence 99999 6999999999999999999999999999999999999999999 999999999999986 799999999999
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHH---HHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHF---HKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~---~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
+++|.|++||++|+++|||||||||||+++|||++++++|++.|+.+ ++.++.++|||+||||||++||+.|+.+..
T Consensus 169 ~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga 248 (281)
T 2a4a_A 169 KTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLAR 248 (281)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhh
Confidence 65444889999999999999999999999999999999998888766 345589999999999999999999999999
Q ss_pred HhcCCCccCCCcceeeccchHHHHHHHHhh
Q psy10250 357 IMLGPDWLNKDLFRIGASSLLNNILQELEA 386 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIGtSs~~~il~~~~~~ 386 (387)
+++|.+|++|++|||||||++++|+++|+.
T Consensus 249 ~~lG~~w~~~~~~RiGtSs~~~~l~~~~~~ 278 (281)
T 2a4a_A 249 RFLSSLACHPDNFRIGSSSLVIKLRKVISQ 278 (281)
T ss_dssp HHTC------CCEEEEESSHHHHHHHHHC-
T ss_pred hhccccccccCceEEecCccHHHHHHHHHh
Confidence 999999999999999999999999999874
No 4
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=100.00 E-value=1.5e-67 Score=504.28 Aligned_cols=215 Identities=31% Similarity=0.445 Sum_probs=204.4
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEE
Q psy10250 128 LKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASV 207 (387)
Q Consensus 128 ~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tV 207 (387)
.+++++||||+|+|++|+++|+++|++|+ +|+|++|||||+||+++++.|++ ++++||+|
T Consensus 41 ~~la~~IDhTlL~p~~t~~~I~~lc~eA~----------------~~~~aaVCV~p~~V~~a~~~L~g----s~v~v~tV 100 (260)
T 3r12_A 41 EDVKSAIEHTNLKPFATPDDIKKLCLEAR----------------ENRFHGVCVNPCYVKLAREELEG----TDVKVVTV 100 (260)
T ss_dssp HHHHHHEEEEECCTTCCHHHHHHHHHHHH----------------HTTCSEEEECGGGHHHHHHHHTT----SCCEEEEE
T ss_pred HHHHHhcCcccCCCCCCHHHHHHHHHHHH----------------hcCCcEEEECHHHHHHHHHHhcC----CCCeEEEE
Confidence 47899999999999999999999999999 79999999999999999999974 78999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 208 AAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 208 vigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
||||+|++++++|++|+++|+++||||||||||++++++|+|+++++||++|+++|++ .+|||||||++| ++++|.+
T Consensus 101 -igFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~ 177 (260)
T 3r12_A 101 -VGFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKG-KVVKVIIETCYL-DTEEKIA 177 (260)
T ss_dssp -ESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHH
T ss_pred -ecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCC-CcEEEEEeCCCC-CHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999985 799999999999 7899999
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKD 367 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~ 367 (387)
||++|+++|||||||||||+++|||++ +|++|++.+++++||||||||||++||++|+ ++|+
T Consensus 178 A~~ia~eaGADfVKTSTGf~~~GAT~e-------dV~lm~~~vg~~v~VKaAGGIrt~~~al~mi-----~aGA------ 239 (260)
T 3r12_A 178 ACVISKLAGAHFVKTSTGFGTGGATAE-------DVHLMKWIVGDEMGVKASGGIRTFEDAVKMI-----MYGA------ 239 (260)
T ss_dssp HHHHHHHTTCSEEECCCSSSSCCCCHH-------HHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-----HTTC------
T ss_pred HHHHHHHhCcCEEEcCCCCCCCCCCHH-------HHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-----HcCC------
Confidence 999999999999999999999999996 6666677789999999999999999999999 5998
Q ss_pred cceeeccchHHHHHHHH
Q psy10250 368 LFRIGASSLLNNILQEL 384 (387)
Q Consensus 368 ~~RIGtSs~~~il~~~~ 384 (387)
+|||||++.+|+++.-
T Consensus 240 -~RiGtS~g~~I~~~~~ 255 (260)
T 3r12_A 240 -DRIGTSSGVKIVQGGE 255 (260)
T ss_dssp -SEEEESCHHHHHHHHH
T ss_pred -ceeecchHHHHHHHHH
Confidence 7999999999998754
No 5
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=100.00 E-value=4.5e-67 Score=494.45 Aligned_cols=213 Identities=26% Similarity=0.374 Sum_probs=202.2
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEE
Q psy10250 128 LKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASV 207 (387)
Q Consensus 128 ~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tV 207 (387)
.+++++||||+|+|++|+++|+++|++|+ +|+|++|||||+||++++ .|++ ++++||+|
T Consensus 11 ~~l~~~IDhTlL~p~~t~~~i~~lc~eA~----------------~~~~~aVcV~p~~v~~a~-~l~~----~~v~v~tV 69 (231)
T 3ndo_A 11 AQVAALVDHTLLKPEATPSDVTALVDEAA----------------DLGVFAVCVSPPLVSVAA-GVAP----SGLAIAAV 69 (231)
T ss_dssp HHHHTTEEEECCCTTCCHHHHHHHHHHHH----------------HHTCSEEEECGGGHHHHH-HHCC----TTCEEEEE
T ss_pred HHHHHhcCcccCCCCCCHHHHHHHHHHHH----------------HhCCcEEEECHHHHHHHH-HhcC----CCCeEEEE
Confidence 46899999999999999999999999999 799999999999999999 8874 79999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC---CChHH
Q psy10250 208 AAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSEN 284 (387)
Q Consensus 208 vigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L---~t~e~ 284 (387)
+|||+|++++++|++|+++|+++||||||||||++++++|+|+++++||++|+++|++ .+|||||||++| .|+++
T Consensus 70 -igFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~-~~lKvIiEt~~L~~~~t~ee 147 (231)
T 3ndo_A 70 -AGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRA-ATLKVIVESAALLEFSGEPL 147 (231)
T ss_dssp -ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCHHHHHHHTCHHH
T ss_pred -ecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccC-CceEEEEECcccCCCCCHHH
Confidence 5999999999999999999999999999999999999999999999999999999986 799999999999 46899
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCC-CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 285 IYCASMTAMFAGSDFIKTSTGKE-KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTGf~-~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
|.+||++|+++|||||||||||+ ++|||++ +|++|++.+++++||||||||||++||++|+ ++|+
T Consensus 148 i~~a~~ia~~aGADfVKTSTGf~~~~gAt~e-------dv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i-----~aGa-- 213 (231)
T 3ndo_A 148 LADVCRVARDAGADFVKTSTGFHPSGGASVQ-------AVEIMARTVGERLGVKASGGIRTAEQAAAML-----DAGA-- 213 (231)
T ss_dssp HHHHHHHHHHTTCSEEECCCSCCTTCSCCHH-------HHHHHHHHHTTTSEEEEESSCCSHHHHHHHH-----HTTC--
T ss_pred HHHHHHHHHHHCcCEEEcCCCCCCCCCCCHH-------HHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-----Hhcc--
Confidence 99999999999999999999998 8999996 6777778889999999999999999999999 5998
Q ss_pred cCCCcceeeccchHHHHHH
Q psy10250 364 LNKDLFRIGASSLLNNILQ 382 (387)
Q Consensus 364 ~~~~~~RIGtSs~~~il~~ 382 (387)
+|||||++.+|+++
T Consensus 214 -----~RiGtS~g~~I~~~ 227 (231)
T 3ndo_A 214 -----TRLGLSGSRAVLDG 227 (231)
T ss_dssp -----SEEEESSHHHHHHH
T ss_pred -----hhcccchHHHHHhh
Confidence 79999999999976
No 6
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=100.00 E-value=4.6e-67 Score=496.15 Aligned_cols=213 Identities=32% Similarity=0.436 Sum_probs=203.0
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEE
Q psy10250 128 LKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASV 207 (387)
Q Consensus 128 ~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tV 207 (387)
.+++++||||+|+|++|+++|+++|++|+ +|+|++|||||+||+++++.|++ ++++||+|
T Consensus 25 ~~l~~~IDhTlL~p~~t~~~i~~lc~eA~----------------~~~~~aVcV~p~~v~~a~~~L~~----s~v~v~tV 84 (239)
T 3ngj_A 25 ATLAKYIDHTLLKADATEEQIRKLCSEAA----------------EYKFASVCVNPTWVPLCAELLKG----TGVKVCTV 84 (239)
T ss_dssp HHHHTTEEEEECCTTCCHHHHHHHHHHHH----------------HHTCSEEEECGGGHHHHHHHHTT----SSCEEEEE
T ss_pred HHHHhhcCcccCCCCCCHHHHHHHHHHHH----------------hcCCcEEEECHHHHHHHHHHhCC----CCCeEEEE
Confidence 36899999999999999999999999999 79999999999999999999984 78999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 208 AAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 208 vigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
||||+|++++++|++|+++|+++||||||||||++++++|+|+++++||++|+++|++ .+|||||||++| ++++|.+
T Consensus 85 -igFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~ 161 (239)
T 3ngj_A 85 -IGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYL-TNEEKVE 161 (239)
T ss_dssp -ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGS-CHHHHHH
T ss_pred -eccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCC-CHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999986 699999999999 7899999
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKD 367 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~ 367 (387)
||++|+++|||||||||||+++|||++ +|++|++.++++++|||||||||++||++|+ ++|+
T Consensus 162 a~~ia~~aGADfVKTSTGf~~ggAt~~-------dv~lmr~~vg~~v~VKasGGIrt~~da~~~i-----~aGA------ 223 (239)
T 3ngj_A 162 VCKRCVAAGAEYVKTSTGFGTHGATPE-------DVKLMKDTVGDKALVKAAGGIRTFDDAMKMI-----NNGA------ 223 (239)
T ss_dssp HHHHHHHHTCSEEECCCSSSSCCCCHH-------HHHHHHHHHGGGSEEEEESSCCSHHHHHHHH-----HTTE------
T ss_pred HHHHHHHHCcCEEECCCCCCCCCCCHH-------HHHHHHHhhCCCceEEEeCCCCCHHHHHHHH-----Hhcc------
Confidence 999999999999999999999999996 6666777889999999999999999999999 5998
Q ss_pred cceeeccchHHHHHH
Q psy10250 368 LFRIGASSLLNNILQ 382 (387)
Q Consensus 368 ~~RIGtSs~~~il~~ 382 (387)
+|||+|++++|+++
T Consensus 224 -~riGtS~~~~I~~~ 237 (239)
T 3ngj_A 224 -SRIGASAGIAILNG 237 (239)
T ss_dssp -EEEEESCHHHHHHT
T ss_pred -cceecccHHHHHhc
Confidence 79999999999975
No 7
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=100.00 E-value=2e-65 Score=482.33 Aligned_cols=216 Identities=28% Similarity=0.334 Sum_probs=200.8
Q ss_pred hhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEec
Q psy10250 130 IIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAA 209 (387)
Q Consensus 130 l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvi 209 (387)
++++||||+|+|++|.++|+++|++|+ +|+|++|||||+||+++++.|+ + ++||+| +
T Consensus 1 ~~~~iDht~L~p~~t~~~i~~l~~~A~----------------~~~~~aVcv~p~~v~~a~~~l~----g--v~v~tv-i 57 (226)
T 1vcv_A 1 MIHLVDYALLKPYLTVDEAVAGARKAE----------------ELGVAAYCVNPIYAPVVRPLLR----K--VKLCVV-A 57 (226)
T ss_dssp CGGGEEEECCCTTCCHHHHHHHHHHHH----------------HHTCSEEEECGGGHHHHGGGCS----S--SEEEEE-E
T ss_pred CcceeeeecCCCCCCHHHHHHHHHHHH----------------HhCCCEEEECHHHHHHHHHHhC----C--CeEEEE-e
Confidence 478999999999999999999999999 7999999999999999999986 3 999999 5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHH
Q psy10250 210 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 289 (387)
Q Consensus 210 gFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~ 289 (387)
|||+|++++++|++|+++ +++||||||||+|++++++|+|+++++||++|+++|++ .++||||||++| ++++|.+||
T Consensus 58 gFP~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~~a~ 134 (226)
T 1vcv_A 58 DFPFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERYTLY 134 (226)
T ss_dssp STTTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999986 699999999999 689999999
Q ss_pred HHHHHcCCCEEEcCCCCC----------CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 290 MTAMFAGSDFIKTSTGKE----------KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 290 ~ia~~aGaDfVKTSTGf~----------~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
++|+++|||||||||||+ ++|||++++++|.+.|+. +++++|||+||||||++||+.|+.++ + +
T Consensus 135 ~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~----~g~~v~vKaaGGirt~~~al~~i~a~-~-~ 208 (226)
T 1vcv_A 135 DIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE----KGYRLGVKMAGGIRTREQAKAIVDAI-G-W 208 (226)
T ss_dssp HHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH----HTCCCEEEEESSCCSHHHHHHHHHHH-C-S
T ss_pred HHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHH----hCCCceEEEeCCCCCHHHHHHHHHHH-H-C
Confidence 999999999999999999 899999877776555432 68999999999999999999999866 2 7
Q ss_pred CCCccCCCcceeeccchHHHH
Q psy10250 360 GPDWLNKDLFRIGASSLLNNI 380 (387)
Q Consensus 360 Ga~w~~~~~~RIGtSs~~~il 380 (387)
|++ |.+|||||||+.+|+
T Consensus 209 Ga~---~~~fRiGtS~~~~i~ 226 (226)
T 1vcv_A 209 GED---PARVRLGTSTPEALL 226 (226)
T ss_dssp CSC---TTTEEEEESCGGGGC
T ss_pred CCC---cCCceEecCchhhhC
Confidence 984 889999999998764
No 8
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=100.00 E-value=4.9e-65 Score=492.88 Aligned_cols=223 Identities=26% Similarity=0.420 Sum_probs=205.4
Q ss_pred hhHHHHHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCC
Q psy10250 122 NKKSLLLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDD 201 (387)
Q Consensus 122 ~~~~~~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~ 201 (387)
+......+++++||||+|+|++|.++|+++|++|+ +|+|++|||||+||+.+++.|++ ++
T Consensus 50 ~~~~~~~~la~~IDhTlL~p~~T~~dI~~lc~eA~----------------~~g~aaVCV~P~~V~~a~~~L~~----s~ 109 (288)
T 3oa3_A 50 YPAPEVVSIAQIIDHTQLSLSATGSQIDVLCAEAK----------------EYGFATVCVRPDYVSRAVQYLQG----TQ 109 (288)
T ss_dssp SCCCCGGGGGGGEEEECCCTTCCHHHHHHHHHHHH----------------HHTCSEEEECGGGHHHHHHHTTT----SS
T ss_pred CCCCCHHHHHHhcCcccCCCCCCHHHHHHHHHHHH----------------hcCCcEEEECHHHHHHHHHHcCC----CC
Confidence 33334567899999999999999999999999999 79999999999999999999985 78
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 281 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t 281 (387)
++||+| +|||+|++++++|++|+++|+++||||||||||++++++|+|+++++||++|+++|++ ..||||||+++| +
T Consensus 110 V~V~tV-igFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~-~~lKVIlEt~~L-t 186 (288)
T 3oa3_A 110 VGVTCV-IGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKD-AILKVILETSQL-T 186 (288)
T ss_dssp CEEEEE-ESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-C
T ss_pred CeEEEE-eCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcC-CCceEEEECCCC-C
Confidence 999999 6999999999999999999999999999999999999999999999999999999987 479999999999 7
Q ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 282 SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
+++|.+||++|+++|||||||||||+++|||++++++|.+.++ ..+.+++||+||||||++||++|+ ++|+
T Consensus 187 ~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~----~~g~~v~VKAAGGIrt~edAl~mi-----~aGA 257 (288)
T 3oa3_A 187 ADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCD----SLQSETRVKASGGIRTIEDCVKMV-----RAGA 257 (288)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHH----HSSSCCEEEEESSCCSHHHHHHHH-----HTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHH----HhCCCceEEEeCCCCCHHHHHHHH-----HcCC
Confidence 8999999999999999999999999999999986666654332 137899999999999999999999 5998
Q ss_pred CccCCCcceeeccchHHHHHHH
Q psy10250 362 DWLNKDLFRIGASSLLNNILQE 383 (387)
Q Consensus 362 ~w~~~~~~RIGtSs~~~il~~~ 383 (387)
+|||||++.+|+++.
T Consensus 258 -------~RiGtS~g~~I~~~~ 272 (288)
T 3oa3_A 258 -------ERLGASAGVKIVNET 272 (288)
T ss_dssp -------SEEEESCHHHHHHHH
T ss_pred -------ceeehhhHHHHHHHH
Confidence 799999999999874
No 9
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=100.00 E-value=1.1e-62 Score=462.47 Aligned_cols=212 Identities=26% Similarity=0.346 Sum_probs=200.2
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEe
Q psy10250 129 KIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVA 208 (387)
Q Consensus 129 ~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVv 208 (387)
+++++||||+|+|++|.++|+++|++|. +|+|++|||+|.|++++++.|++ ++++||+|
T Consensus 2 ~~~~~iDht~L~p~~t~~~i~~l~~~a~----------------~~~~~aVcv~p~~v~~~~~~l~~----~~v~v~~v- 60 (220)
T 1ub3_A 2 DLAAHIDHTLLKPTATLEEVAKAAEEAL----------------EYGFYGLCIPPSYVAWVRARYPH----APFRLVTV- 60 (220)
T ss_dssp CGGGGEEEECCCTTCCHHHHHHHHHHHH----------------HHTCSEEECCGGGHHHHHHHCTT----CSSEEEEE-
T ss_pred ChHHhcceeccCCCCCHHHHHHHHHHHH----------------HhCCCEEEECHHHHHHHHHHhCC----CCceEEEE-
Confidence 4789999999999999999999999999 78999999999999999999974 68999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
+|||+|++++++|+.|+++|+++||||||||+|++++++|+|+++++||.+|+++|++ ..+||||||++| ++++|.+|
T Consensus 61 igFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lkvIlet~~l-~~e~i~~a 138 (220)
T 1ub3_A 61 VGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQ-AVLKVILETGYF-SPEEIARL 138 (220)
T ss_dssp ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTT-SEEEEECCGGGS-CHHHHHHH
T ss_pred ecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcC-CCceEEEecCCC-CHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999986 589999999999 68999999
Q ss_pred HHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCc
Q psy10250 289 SMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDL 368 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~ 368 (387)
|++|+++|||||||||||+++|||++ ++++|++.++.+++||+||||||++|+++|+ ++|+
T Consensus 139 ~~ia~eaGADfVKTsTGf~~~gat~~-------dv~~m~~~vg~~v~VkaaGGirt~~~al~~i-----~aGa------- 199 (220)
T 1ub3_A 139 AEAAIRGGADFLKTSTGFGPRGASLE-------DVALLVRVAQGRAQVKAAGGIRDRETALRML-----KAGA------- 199 (220)
T ss_dssp HHHHHHHTCSEEECCCSSSSCCCCHH-------HHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-----HTTC-------
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCHH-------HHHHHHHhhCCCCeEEEECCCCCHHHHHHHH-----HCCC-------
Confidence 99999999999999999999999996 6666777788999999999999999999999 5898
Q ss_pred ceeeccchHHHHHH
Q psy10250 369 FRIGASSLLNNILQ 382 (387)
Q Consensus 369 ~RIGtSs~~~il~~ 382 (387)
.|||+|++.+|+++
T Consensus 200 ~RiG~S~g~~I~~~ 213 (220)
T 1ub3_A 200 SRLGTSSGVALVAG 213 (220)
T ss_dssp SEEEETTHHHHHC-
T ss_pred cccchhHHHHHHHH
Confidence 69999999998754
No 10
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=100.00 E-value=6.8e-59 Score=439.94 Aligned_cols=210 Identities=28% Similarity=0.306 Sum_probs=195.2
Q ss_pred HHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCC-CceEEE
Q psy10250 128 LKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARD-DVKVAS 206 (387)
Q Consensus 128 ~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~-~v~v~t 206 (387)
.+++.+||||+|+|++|.++|+++|++|. +|+|++|||+|.|+ .+++.|++ + ++++|+
T Consensus 18 ~~l~~~iDht~L~p~~t~~~i~~l~~~a~----------------~~~~~aVcv~p~~v-~a~~~l~~----~~~v~v~t 76 (234)
T 1n7k_A 18 EDLASRIDSTLLSPRATEEDVRNLVREAS----------------DYGFRCAVLTPVYT-VKISGLAE----KLGVKLCS 76 (234)
T ss_dssp HHHHTTEEEECCCTTCCHHHHHHHHHHHH----------------HHTCSEEEECHHHH-HHHHHHHH----HHTCCEEE
T ss_pred HHHHHHhceeccCCCCCHHHHHHHHHHHH----------------HhCCCEEEEchHHh-eeehHhCC----CCCceEEE
Confidence 45899999999999999999999999999 79999999999999 99999985 5 799999
Q ss_pred EecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHH
Q psy10250 207 VAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENI 285 (387)
Q Consensus 207 VvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i 285 (387)
| +|||+|++++++|+.|+++|+++||||||||+|++++++ ++++||.+|+++|++ +.++||||||++| ++++|
T Consensus 77 v-igFP~G~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-~~e~i 150 (234)
T 1n7k_A 77 V-IGFPLGQAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLW-DDKTL 150 (234)
T ss_dssp E-ESTTTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGS-CHHHH
T ss_pred E-eCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCC-CHHHH
Confidence 9 599999999999999999999999999999999999998 999999999999964 4799999999999 68999
Q ss_pred HHHHHHHHHcCCCEEEcCCCCCC-CCCChhhhHhHHHHHHH--HHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 286 YCASMTAMFAGSDFIKTSTGKEK-TNATIPAGIIMCSAIKH--FHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTGf~~-~gat~~~~~~m~~~v~~--~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+||++|+++|||||||||||++ +|||++ ++++ |++.++ ++||+||||||+++++.|+ ++|+
T Consensus 151 ~~a~ria~eaGADfVKTsTG~~~~~gAt~~-------dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i-----~aGa- 215 (234)
T 1n7k_A 151 SLLVDSSRRAGADIVKTSTGVYTKGGDPVT-------VFRLASLAKPLG--MGVKASGGIRSGIDAVLAV-----GAGA- 215 (234)
T ss_dssp HHHHHHHHHTTCSEEESCCSSSCCCCSHHH-------HHHHHHHHGGGT--CEEEEESSCCSHHHHHHHH-----HTTC-
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCCCCCHH-------HHHHHHHHHHHC--CCEEEecCCCCHHHHHHHH-----HcCc-
Confidence 99999999999999999999998 999997 5555 777777 9999999999999999999 5998
Q ss_pred ccCCCcceeeccchHHHHHHHHhh
Q psy10250 363 WLNKDLFRIGASSLLNNILQELEA 386 (387)
Q Consensus 363 w~~~~~~RIGtSs~~~il~~~~~~ 386 (387)
.|||+|++.+|+++ +++
T Consensus 216 ------~RiG~S~g~~I~~~-~~~ 232 (234)
T 1n7k_A 216 ------DIIGTSSAVKVLES-FKS 232 (234)
T ss_dssp ------SEEEETTHHHHHHH-HHC
T ss_pred ------cccchHHHHHHHHh-hhh
Confidence 69999999999875 443
No 11
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=100.00 E-value=2.2e-47 Score=358.86 Aligned_cols=210 Identities=28% Similarity=0.363 Sum_probs=197.2
Q ss_pred HhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEe
Q psy10250 129 KIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVA 208 (387)
Q Consensus 129 ~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVv 208 (387)
+++++||||+|+|+.|.++++++|++|+ +|||++|||+|.|++.+++.|. +++++++
T Consensus 3 ~~~~~iDht~l~p~~t~~~i~~l~~~a~----------------~~g~~~v~v~~~~v~~~~~~l~------~v~v~~v- 59 (225)
T 1mzh_A 3 DVRKYIDNAALKPHLSEKEIEEFVLKSE----------------ELGIYAVCVNPYHVKLASSIAK------KVKVCCV- 59 (225)
T ss_dssp CGGGGEEEEECCTTCCHHHHHHHHHHHH----------------HTTCSEEEECGGGHHHHHHHCS------SSEEEEE-
T ss_pred chHhhccccccCCCCCHHHHHHHHHHHH----------------HhCCeEEEECHHHHHHHHHHhc------CCceeeE-
Confidence 4789999999999999999999999999 7999999999999999998874 5899999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
+|||+|.+....|..|+++|+++|||+||||+|++.+++|+|+.+.+|+++++++++ +.++|+|+|++.| +++++.++
T Consensus 60 ~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l-~~~~~~~~ 137 (225)
T 1mzh_A 60 IGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYL-NEEEIKKA 137 (225)
T ss_dssp ESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGC-CHHHHHHH
T ss_pred ecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCC-CHHHHHHH
Confidence 599999999999999999999999999999999999999999999999999999998 5899999999999 67889999
Q ss_pred HHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCc
Q psy10250 289 SMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDL 368 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~ 368 (387)
|+++.++|+|||||||||.++|++++ +++.+++.++++++||++|||||.++|++|+ .+|+
T Consensus 138 a~~a~eaGad~I~tstg~~~gga~~~-------~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-----~aGA------- 198 (225)
T 1mzh_A 138 VEICIEAGADFIKTSTGFAPRGTTLE-------EVRLIKSSAKGRIKVKASGGIRDLETAISMI-----EAGA------- 198 (225)
T ss_dssp HHHHHHHTCSEEECCCSCSSSCCCHH-------HHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-----HTTC-------
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCHH-------HHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-----HhCc-------
Confidence 99999999999999999988899985 6677777788899999999999999999999 5898
Q ss_pred ceeeccchHHHHHH
Q psy10250 369 FRIGASSLLNNILQ 382 (387)
Q Consensus 369 ~RIGtSs~~~il~~ 382 (387)
+|||+|++.+|+++
T Consensus 199 ~~iG~s~~~~i~~~ 212 (225)
T 1mzh_A 199 DRIGTSSGISIAEE 212 (225)
T ss_dssp SEEEESCHHHHHHH
T ss_pred hHHHHccHHHHHHH
Confidence 69999999998876
No 12
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=100.00 E-value=7e-34 Score=274.56 Aligned_cols=113 Identities=26% Similarity=0.264 Sum_probs=106.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhc---CChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN---NQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIY 77 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~---g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~ 77 (387)
|||+|++++++|++|+++|+++||||||||||++++|+ |+|++|++||++|+++|++ .++|||||||+|+++|.|+
T Consensus 91 gFP~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~-~~lKVIlEt~~Lt~~e~i~ 169 (297)
T 4eiv_A 91 NFPEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGP-KTLKVVLSGGELQGGDIIS 169 (297)
T ss_dssp STTTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTT-SEEEEECCSSCCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcC-CceEEEEecccCCcHHHHH
Confidence 79999999999999999999999999999999999999 9999999999999999975 6899999999996656689
Q ss_pred HHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccc
Q psy10250 78 YASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAV 115 (387)
Q Consensus 78 ~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~ 115 (387)
+||++|+++|||||||||||+++|||+++...| ..++
T Consensus 170 ~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM-~~~v 206 (297)
T 4eiv_A 170 RAAVAALEGGADFLQTSSGLGATHATMFTVHLI-SIAL 206 (297)
T ss_dssp HHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHH-HHHH
T ss_pred HHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHH-HHHH
Confidence 999999999999999999999999999988888 5444
No 13
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=100.00 E-value=4.3e-33 Score=266.31 Aligned_cols=108 Identities=27% Similarity=0.414 Sum_probs=104.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|++++++|+.|+++|+++||||||||+|+|++|+|+|+++++||++|+++|++ .++|||||||+| ++++|.+||
T Consensus 102 gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~A~ 179 (260)
T 3r12_A 102 GFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKG-KVVKVIIETCYL-DTEEKIAAC 179 (260)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCC-CcEEEEEeCCCC-CHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999985 689999999998 789999999
Q ss_pred HHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
++|+++|+|||||||||+++|||+++...|
T Consensus 180 ~ia~eaGADfVKTSTGf~~~GAT~edV~lm 209 (260)
T 3r12_A 180 VISKLAGAHFVKTSTGFGTGGATAEDVHLM 209 (260)
T ss_dssp HHHHHTTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred HHHHHhCcCEEEcCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999977777
No 14
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=99.98 E-value=1.4e-32 Score=260.29 Aligned_cols=108 Identities=27% Similarity=0.338 Sum_probs=103.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|.+++++|+.|+++|+++||||||||+|++++|+|+|+++++||++|+++|++ .++|||||||+| ++++|+++|
T Consensus 86 gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~a~ 163 (239)
T 3ngj_A 86 GFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYL-TNEEKVEVC 163 (239)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGS-CHHHHHHHH
T ss_pred ccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCC-CHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999986 589999999998 789999999
Q ss_pred HHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
++|+++|+|||||||||+++|||+++...|
T Consensus 164 ~ia~~aGADfVKTSTGf~~ggAt~~dv~lm 193 (239)
T 3ngj_A 164 KRCVAAGAEYVKTSTGFGTHGATPEDVKLM 193 (239)
T ss_dssp HHHHHHTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred HHHHHHCcCEEECCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999866666
No 15
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=99.98 E-value=8.7e-33 Score=260.68 Aligned_cols=113 Identities=26% Similarity=0.340 Sum_probs=105.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCC---CCHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGEL---KTSENIY 77 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L---~~~e~i~ 77 (387)
|||+|.+++++|++|+++|+++||||||||+|+|++|+|+|+++++||++|+++|++ .++|||||||+| .++++|+
T Consensus 71 gFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~-~~lKvIiEt~~L~~~~t~eei~ 149 (231)
T 3ndo_A 71 GFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRA-ATLKVIVESAALLEFSGEPLLA 149 (231)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCHHHHHHHTCHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccC-CceEEEEECcccCCCCCHHHHH
Confidence 799999999999999999999999999999999999999999999999999999985 689999999988 4789999
Q ss_pred HHHHHHHHcCCCEEecCCCCC-CCCCCCcccccchhccc
Q psy10250 78 YASMTAMFAGSDFIKTSTGKE-KTNATIPADLTRQFEAV 115 (387)
Q Consensus 78 ~a~~~a~~ag~dfvKTSTG~~-~~gat~~~~~~~~~~~~ 115 (387)
++|++|+++|+|||||||||+ ++|||+++...| .+.+
T Consensus 150 ~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm-~~~v 187 (231)
T 3ndo_A 150 DVCRVARDAGADFVKTSTGFHPSGGASVQAVEIM-ARTV 187 (231)
T ss_dssp HHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHH-HHHH
T ss_pred HHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHH-HHHh
Confidence 999999999999999999998 899999877777 4443
No 16
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=99.97 E-value=2.3e-32 Score=261.97 Aligned_cols=110 Identities=35% Similarity=0.427 Sum_probs=103.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHccc-CccEEEEEeccCCCCHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEE-KIHMKTILAVGELKTSENIYYA 79 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~-~~~~KvIlEt~~L~~~e~i~~a 79 (387)
|||+|..++++|+.|+++|+++||||||||+|++++|+|+|+++++||++|+++|++ +.++||||||++|+++|.|+++
T Consensus 76 gFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a 155 (260)
T 1p1x_A 76 NFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKA 155 (260)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999974 4789999999999554448899
Q ss_pred HHHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 80 SMTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 80 ~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
|++|+++|+|||||||||+++|||+++...|
T Consensus 156 ~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm 186 (260)
T 1p1x_A 156 SEISIKAGADFIKTSTGKVAVNATPESARIM 186 (260)
T ss_dssp HHHHHHTTCSEEECCCSCSSCCCCHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999977777
No 17
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=99.97 E-value=4.5e-32 Score=260.37 Aligned_cols=199 Identities=16% Similarity=0.072 Sum_probs=171.5
Q ss_pred hccccccc-CCCCC-----CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCC--c
Q psy10250 131 IEFIDLTT-LSGDD-----TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDD--V 202 (387)
Q Consensus 131 ~~~ID~T~-L~~~~-----T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~--v 202 (387)
+=-||||+ |+|++ |.++++++|+++. +|+|.+||++|.|++.++ +.+ ++ +
T Consensus 20 i~aiDh~~~~gp~~~~~~~~~~di~~~~~~a~----------------~~~~~av~v~~~~v~~~~--~~~----~~liv 77 (263)
T 1w8s_A 20 ILAYDHGIEHGPADFMDNPDSADPEYILRLAR----------------DAGFDGVVFQRGIAEKYY--DGS----VPLIL 77 (263)
T ss_dssp EEECCHHHHTCGGGGSSSGGGGCHHHHHHHHH----------------HHTCSEEEECHHHHHHHC--CSS----SCEEE
T ss_pred EEECCCCcCcCccccccCcchhhHHHHHHHHH----------------hhCCCEEEECHHHHHHhh--cCC----CcEEE
Confidence 33589999 99999 9999999999999 799999999999999988 543 56 8
Q ss_pred eEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC--
Q psy10250 203 KVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-- 280 (387)
Q Consensus 203 ~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~-- 280 (387)
+++++ ++|| |..+++.|+.++++|++.||++|||++|++ +++++++++|+++++++|+. ..+++|+| +++.
T Consensus 78 ~~~~~-~~~~-g~~~~~~~~~~ve~Ai~~Ga~~v~~~~nig---~~~~~~~~~~~~~v~~~~~~-~~~~vIi~-~~~~G~ 150 (263)
T 1w8s_A 78 KLNGK-TTLY-NGEPVSVANCSVEEAVSLGASAVGYTIYPG---SGFEWKMFEELARIKRDAVK-FDLPLVVE-SFPRGG 150 (263)
T ss_dssp ECEEC-CTTC-CSSCCCEESSCHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHH-HTCCEEEE-ECCCST
T ss_pred EEeCC-CCcC-CCCccchHHHHHHHHHHCCCCEEEEEEecC---CcCHHHHHHHHHHHHHHHHH-cCCeEEEE-eeCCCC
Confidence 99999 6999 888999999999999999999999999998 78999999999999999975 46789998 5661
Q ss_pred ------ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCC--CHHHHHHHH
Q psy10250 281 ------TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIS--TFEDSVRWI 352 (387)
Q Consensus 281 ------t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIr--t~~~a~~~i 352 (387)
+++++.++|++|.++|||||||||. .+++ .++.+++.+ +.++||+||||+ |.+++++++
T Consensus 151 ~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~-----~~~e-------~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i 217 (263)
T 1w8s_A 151 KVVNETAPEIVAYAARIALELGADAMKIKYT-----GDPK-------TFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQV 217 (263)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHTCSEEEEECC-----SSHH-------HHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHcCCCEEEEcCC-----CCHH-------HHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 5688999999999999999999962 2554 667777766 556899999999 999999999
Q ss_pred HHHHHhcCCCccCCCcceeeccchHHHHH
Q psy10250 353 YLVLIMLGPDWLNKDLFRIGASSLLNNIL 381 (387)
Q Consensus 353 ~l~~~~~Ga~w~~~~~~RIGtSs~~~il~ 381 (387)
..+.+ +|+ . |+|.+.+|+.
T Consensus 218 ~~~~~-aGA-------~--GvsvgraI~~ 236 (263)
T 1w8s_A 218 EGVLE-AGA-------L--GIAVGRNVWQ 236 (263)
T ss_dssp HHHHH-TTC-------C--EEEESHHHHT
T ss_pred HHHHH-cCC-------e--EEEEehhhcC
Confidence 65554 787 3 8888777764
No 18
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=99.97 E-value=1.4e-31 Score=251.84 Aligned_cols=107 Identities=24% Similarity=0.290 Sum_probs=102.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|..++++|+.|+++ +++||||||||+|++++|+|+|+++++||++|+++|++ .++||||||++| ++++|+++|
T Consensus 58 gFP~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~~a~ 134 (226)
T 1vcv_A 58 DFPFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERYTLY 134 (226)
T ss_dssp STTTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHHHHH
Confidence 799999999999999999 99999999999999999999999999999999999976 589999999999 689999999
Q ss_pred HHHHHcCCCEEecCCCCC----------CCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKE----------KTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~----------~~gat~~~~~~~ 110 (387)
++|+++|+|||||||||+ ++|||+++...|
T Consensus 135 ~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm 174 (226)
T 1vcv_A 135 DIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAI 174 (226)
T ss_dssp HHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHH
T ss_pred HHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHH
Confidence 999999999999999999 899999977777
No 19
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=99.97 E-value=2.4e-31 Score=257.42 Aligned_cols=108 Identities=23% Similarity=0.453 Sum_probs=102.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|.+++++|+.|+++|+++||||||||||++++|+|+|+++++||++|+++|++. .+|||||+|+| ++++|.+||
T Consensus 117 gFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~L-t~eei~~A~ 194 (288)
T 3oa3_A 117 GFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQL-TADEIIAGC 194 (288)
T ss_dssp STTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGC-CHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCC-CHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999863 69999999998 789999999
Q ss_pred HHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
++|+++|+|||||||||+++|||+++...|
T Consensus 195 ~ia~eaGADfVKTSTGf~~~GAT~edv~lm 224 (288)
T 3oa3_A 195 VLSSLAGADYVKTSTGFNGPGASIENVSLM 224 (288)
T ss_dssp HHHHHTTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred HHHHHcCCCEEEcCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999966666
No 20
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=99.97 E-value=7.4e-32 Score=260.66 Aligned_cols=109 Identities=32% Similarity=0.397 Sum_probs=103.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChh---HHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWP---ELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIY 77 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~---~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~ 77 (387)
|||+|+.++++|+.|+++|+++||||||||+|++++|+|+|+ ++++||++|+++|++ .++||||||++|+++|.|+
T Consensus 97 gFP~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L~d~e~i~ 175 (281)
T 2a4a_A 97 NFPYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTN-KILKVIIEVGELKTEDLII 175 (281)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTT-SEEEEECCHHHHCSHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcC-CceEEEEecccCCcHHHHH
Confidence 799999999999999999999999999999999999999999 999999999999985 6899999999996544488
Q ss_pred HHHHHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 78 YASMTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 78 ~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
+||++|+++|+|||||||||+++|||+++...|
T Consensus 176 ~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm 208 (281)
T 2a4a_A 176 KTTLAVLNGNADFIKTSTGKVQINATPSSVEYI 208 (281)
T ss_dssp HHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999988887
No 21
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=99.97 E-value=6.6e-31 Score=246.55 Aligned_cols=108 Identities=30% Similarity=0.374 Sum_probs=103.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|..++++|+.|+++|+++||||||||+|+|++|+|+|+++.+||.+|+++|++ ..+||||||++| ++++|.++|
T Consensus 62 gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lkvIlet~~l-~~e~i~~a~ 139 (220)
T 1ub3_A 62 GFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQ-AVLKVILETGYF-SPEEIARLA 139 (220)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTT-SEEEEECCGGGS-CHHHHHHHH
T ss_pred cCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcC-CCceEEEecCCC-CHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999976 489999999999 789999999
Q ss_pred HHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
++|+++|||||||||||+++|||+++...|
T Consensus 140 ~ia~eaGADfVKTsTGf~~~gat~~dv~~m 169 (220)
T 1ub3_A 140 EAAIRGGADFLKTSTGFGPRGASLEDVALL 169 (220)
T ss_dssp HHHHHHTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred HHHHHhCCCEEEeCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999877776
No 22
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=99.95 E-value=1.2e-28 Score=232.95 Aligned_cols=104 Identities=26% Similarity=0.305 Sum_probs=97.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHccc-CccEEEEEeccCCCCHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEE-KIHMKTILAVGELKTSENIYYA 79 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~-~~~~KvIlEt~~L~~~e~i~~a 79 (387)
|||+|..++++|+.|+++|+++||||||||+|+|++++ ++.+||.+|+++|++ +.++||||||++| ++++|.++
T Consensus 79 gFP~G~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-~~e~i~~a 153 (234)
T 1n7k_A 79 GFPLGQAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLW-DDKTLSLL 153 (234)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGS-CHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCC-CHHHHHHH
Confidence 79999999999999999999999999999999999999 999999999999974 4689999999999 68999999
Q ss_pred HHHHHHcCCCEEecCCCCCC-CCCCCccccc
Q psy10250 80 SMTAMFAGSDFIKTSTGKEK-TNATIPADLT 109 (387)
Q Consensus 80 ~~~a~~ag~dfvKTSTG~~~-~gat~~~~~~ 109 (387)
|++|+++|+|||||||||++ +|||+++...
T Consensus 154 ~ria~eaGADfVKTsTG~~~~~gAt~~dv~l 184 (234)
T 1n7k_A 154 VDSSRRAGADIVKTSTGVYTKGGDPVTVFRL 184 (234)
T ss_dssp HHHHHHTTCSEEESCCSSSCCCCSHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999998 9998876555
No 23
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.85 E-value=2e-21 Score=182.24 Aligned_cols=108 Identities=27% Similarity=0.300 Sum_probs=99.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
|||+|.+....|..|+++|+++|||+||||+|++.+++|+|+.+.+++++++++++ ++++|+|+|+++| +++++..+|
T Consensus 61 ~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l-~~~~~~~~a 138 (225)
T 1mzh_A 61 GFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYL-NEEEIKKAV 138 (225)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGC-CHHHHHHHH
T ss_pred cCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCC-CHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999997 5789999999998 778899999
Q ss_pred HHHHHcCCCEEecCCCCCCCCCCCcccccc
Q psy10250 81 MTAMFAGSDFIKTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG~~~~gat~~~~~~~ 110 (387)
+++.++|+|||||||||..+|++++....|
T Consensus 139 ~~a~eaGad~I~tstg~~~gga~~~~i~~v 168 (225)
T 1mzh_A 139 EICIEAGADFIKTSTGFAPRGTTLEEVRLI 168 (225)
T ss_dssp HHHHHHTCSEEECCCSCSSSCCCHHHHHHH
T ss_pred HHHHHhCCCEEEECCCCCCCCCCHHHHHHH
Confidence 999999999999999998788765543333
No 24
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.72 E-value=2.3e-18 Score=164.08 Aligned_cols=191 Identities=18% Similarity=0.121 Sum_probs=147.7
Q ss_pred HHhhccccccc-CCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEE
Q psy10250 128 LKIIEFIDLTT-LSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVAS 206 (387)
Q Consensus 128 ~~l~~~ID~T~-L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~t 206 (387)
+.++..|||++ |.|..+.+++.++|+.+. ++|+.++|+.|.+++.+++.+. .++..
T Consensus 26 ~~~~~~id~~~~l~p~~~~~~~~~~~~~~~----------------~~g~~~i~~~~~~~~~~~~~~~-------~~~~~ 82 (273)
T 2qjg_A 26 KTVIVPMDHGVSNGPIKGLIDIRKTVNDVA----------------EGGANAVLLHKGIVRHGHRGYG-------KDVGL 82 (273)
T ss_dssp CEEEEECCHHHHHCSCTTSSSHHHHHHHHH----------------HHTCSEEEECHHHHHSCCCSSS-------CCCEE
T ss_pred CEEEEEcccccccCCCcchhhHHHHHHHHH----------------hcCCCEEEeCHHHHHHHHHhhc-------CCCCE
Confidence 35678899999 999999999999999999 7899999999866654433222 24566
Q ss_pred EecCCCCCCC-----CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec----
Q psy10250 207 VAAGFPSGQY-----LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG---- 277 (387)
Q Consensus 207 VvigFP~G~~-----~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---- 277 (387)
+ ++||+|.. .++.+..++++|++.||+.|||++|.+ +.+++.+.+++++++++|+. ..+++|+|+.
T Consensus 83 ~-v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~---~~~~~~~~~~~~~v~~~~~~-~g~~viv~~~~~G~ 157 (273)
T 2qjg_A 83 I-IHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVG---SDEDWEAYRDLGMIAETCEY-WGMPLIAMMYPRGK 157 (273)
T ss_dssp E-EECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEET---STTHHHHHHHHHHHHHHHHH-HTCCEEEEEEECST
T ss_pred E-EEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecC---CCCHHHHHHHHHHHHHHHHH-cCCCEEEEeCCCCc
Confidence 7 59999983 245568899999999999999999987 45788899999999999974 3467888872
Q ss_pred ----cCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCC--HHHHHHH
Q psy10250 278 ----ELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIST--FEDSVRW 351 (387)
Q Consensus 278 ----~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt--~~~a~~~ 351 (387)
.+ +.+++..+++.+.++|+|||+|+. +..+ +.++.+++.. ++.|+++|||++ .++++.+
T Consensus 158 ~l~~~~-~~~~~~~~a~~a~~~Gad~i~~~~-----~~~~-------~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~ 222 (273)
T 2qjg_A 158 HIQNER-DPELVAHAARLGAELGADIVKTSY-----TGDI-------DSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQM 222 (273)
T ss_dssp TCSCTT-CHHHHHHHHHHHHHTTCSEEEECC-----CSSH-------HHHHHHHHHC--SSCEEEECCSCCSSHHHHHHH
T ss_pred ccCCCC-CHhHHHHHHHHHHHcCCCEEEECC-----CCCH-------HHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHH
Confidence 25 567888899999999999999983 1234 3455555544 589999999995 8898777
Q ss_pred HHHHHHhcCCC
Q psy10250 352 IYLVLIMLGPD 362 (387)
Q Consensus 352 i~l~~~~~Ga~ 362 (387)
+..+. .+|++
T Consensus 223 ~~~~~-~~Ga~ 232 (273)
T 2qjg_A 223 IKDAM-EAGAA 232 (273)
T ss_dssp HHHHH-HHTCS
T ss_pred HHHHH-HcCCc
Confidence 64333 37874
No 25
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=99.41 E-value=1.7e-12 Score=126.44 Aligned_cols=228 Identities=12% Similarity=0.053 Sum_probs=142.1
Q ss_pred HcCCCEEecCCCCCCCCCCCcccccchhccccchhh-hhhHHHHHHhhccccccc-CCCCCCHHHHHHHHHHhcCCCcHH
Q psy10250 85 FAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRL-KNKKSLLLKIIEFIDLTT-LSGDDTEAVVETLTLKAIQPLSEE 162 (387)
Q Consensus 85 ~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ID~T~-L~~~~T~~~i~~l~~~A~~~~~~~ 162 (387)
+.|.|-=.+.-||.-.|+.. .+..+ .+|++|+ ... .=+-++=-+||-+ +.|....+++...+.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~~~Gk---~~Rl~ri~~~~--~G~~~iv~~DHG~~~gp~~gl~~~~~~i~~l~------ 83 (295)
T 3glc_A 16 DFRTDQPQKNIPFTLKGCGA-LDWGM---QSRLSRIFNPK--TGKTVMLAFDHGYFQGPTTGLERIDINIAPLF------ 83 (295)
T ss_dssp CCCTTSCCCCCCCCSTTCTT-SCHHH---HHHHHHHSCTT--TSCEEEEECCTHHHHCSCTTCTTHHHHTGGGG------
T ss_pred hcCCCCCCcCCCeeeecccc-cchHH---HHHHHHhcCCC--CCCEEEEecCCCcccCCCCchhhhHHHHHHhh------
Confidence 33444334444666556633 34555 6677775 000 0012344578875 566665566644432221
Q ss_pred HHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC-HHHHHHHHHHHHHCCCCeeeeecC
Q psy10250 163 LKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL-LETRLHEIELLAKQKVDEVDIVIQ 241 (387)
Q Consensus 163 ~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~-~e~K~~Ea~~Ai~~GAdEID~Vin 241 (387)
. ++.+|.+.+=.++....... +.++-+-.- .+-+....+ -..-..++++|+++|||+|+|++|
T Consensus 84 ----------~-g~dav~~~~G~~~~~~~~~~----~~~lil~l~-~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~ 147 (295)
T 3glc_A 84 ----------E-HADVLMCTRGILRSVVPPAT----NRPVVLRAS-GANSILAELSNEAVALSMDDAVRLNSCAVAAQVY 147 (295)
T ss_dssp ----------G-GCSEEEECHHHHHHHSCGGG----CCCEEEECE-ECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEEC
T ss_pred ----------c-CCCEEEECHhHHhhhccccC----CccEEEEEc-CCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEE
Confidence 2 57888888755554332221 122222111 122222222 223346899999999999999999
Q ss_pred chhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc----CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhH
Q psy10250 242 RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE----LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGI 317 (387)
Q Consensus 242 ~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~----L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~ 317 (387)
++ ++++.+..+|+.++++.|+. .-+++|+|+.. ..+++.+..+|++|.++|||||||+ |. +.++
T Consensus 148 ~G---s~~~~~~l~~i~~v~~~a~~-~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~--~t--~e~~---- 215 (295)
T 3glc_A 148 IG---SEYEHQSIKNIIQLVDAGMK-VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY--YV--EKGF---- 215 (295)
T ss_dssp TT---STTHHHHHHHHHHHHHHHHT-TTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE--CC--TTTH----
T ss_pred CC---CCcHHHHHHHHHHHHHHHHH-cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC--CC--HHHH----
Confidence 98 89999999999999999976 34889999854 1245557789999999999999998 42 2222
Q ss_pred hHHHHHHHHHHHcCCCceEeEeccCC-CHHHHHHHHHHHHHhcCC
Q psy10250 318 IMCSAIKHFHKLSGKKIGLKPAGGIS-TFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 318 ~m~~~v~~~~~~~~~~~gIKasGGIr-t~~~a~~~i~l~~~~~Ga 361 (387)
+...+ ..+++|+++||++ +.+++++++.-+.+ +|+
T Consensus 216 ------~~vv~--~~~vPVv~~GG~~~~~~~~l~~v~~ai~-aGA 251 (295)
T 3glc_A 216 ------ERIVA--GCPVPIVIAGGKKLPEREALEMCWQAID-QGA 251 (295)
T ss_dssp ------HHHHH--TCSSCEEEECCSCCCHHHHHHHHHHHHH-TTC
T ss_pred ------HHHHH--hCCCcEEEEECCCCCHHHHHHHHHHHHH-hCC
Confidence 22222 3468999999998 67778777754443 587
No 26
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=99.40 E-value=1.1e-13 Score=132.42 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=80.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCC--------C
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELK--------T 72 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~--------~ 72 (387)
+|| |..+++.|+.++++|++.||++|||++|++ +++++++.+|+++++++|+. ..+++|+| +|+. +
T Consensus 84 ~~~-g~~~~~~~~~~ve~Ai~~Ga~~v~~~~nig---~~~~~~~~~~~~~v~~~~~~-~~~~vIi~-~~~~G~~~~~~~s 157 (263)
T 1w8s_A 84 TLY-NGEPVSVANCSVEEAVSLGASAVGYTIYPG---SGFEWKMFEELARIKRDAVK-FDLPLVVE-SFPRGGKVVNETA 157 (263)
T ss_dssp TTC-CSSCCCEESSCHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHH-HTCCEEEE-ECCCSTTCCCTTC
T ss_pred CcC-CCCccchHHHHHHHHHHCCCCEEEEEEecC---CcCHHHHHHHHHHHHHHHHH-cCCeEEEE-eeCCCCccccCCC
Confidence 589 888888999999999999999999999998 78999999999999999975 35788998 5761 5
Q ss_pred HHHHHHHHHHHHHcCCCEEecCC
Q psy10250 73 SENIYYASMTAMFAGSDFIKTST 95 (387)
Q Consensus 73 ~e~i~~a~~~a~~ag~dfvKTST 95 (387)
++++.++|++|.++|+|||||||
T Consensus 158 ~~~i~~a~~~a~~~GAD~vkt~~ 180 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMKIKY 180 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcC
Confidence 78899999999999999999995
No 27
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=99.22 E-value=4.1e-11 Score=116.74 Aligned_cols=133 Identities=15% Similarity=0.075 Sum_probs=108.5
Q ss_pred CCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCC-----eeeeecCchhhhcCChhH---HHHHHHHHHHHhCCCcce
Q psy10250 199 RDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEKCGEKIHM 270 (387)
Q Consensus 199 ~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAd-----EID~Vin~~~lk~g~~~~---v~~Ei~~v~~~~~~~~~l 270 (387)
+++++++++ +.+++..|..|.+.+..-|++ +.|+|+ +|++++.. +.+.++++++.+++ .
T Consensus 143 gt~v~i~~t------Rkt~P~~r~~e~~Av~~GG~~~hr~~l~d~vl----ikdnhi~~~Gti~~ai~~~r~~~~~--~- 209 (296)
T 1qap_A 143 GTQTQLLDT------RKTLPGLRTALKYAVLCGGGANHRLGLTDAFL----IKENHIIASGSVRQAVEKAFWLHPD--V- 209 (296)
T ss_dssp TSSCEEECC------SCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEE----ECHHHHHHHSSHHHHHHHHHHHSTT--S-
T ss_pred CCCeEEEEe------CCCCcccHHHHHHHHHHCCchhhccccccEEE----EEcCCeeccCCHHHHHHHHHHhCCC--C-
Confidence 366766554 888899999999999999999 999998 55555555 78999999998875 4
Q ss_pred EEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHH
Q psy10250 271 KTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVR 350 (387)
Q Consensus 271 KvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~ 350 (387)
|+++|+..| +++.+| .++|+|||++++ .+++ .++.+.+..+++++|+||||| |.+++.+
T Consensus 210 kI~vev~tl---ee~~eA----~~aGaD~I~ld~------~~~e-------~l~~~v~~~~~~~~I~ASGGI-t~~~i~~ 268 (296)
T 1qap_A 210 PVEVEVENL---DELDDA----LKAGADIIMLDN------FNTD-------QMREAVKRVNGQARLEVSGNV-TAETLRE 268 (296)
T ss_dssp CEEEEESSH---HHHHHH----HHTTCSEEEESS------CCHH-------HHHHHHHTTCTTCCEEECCCS-CHHHHHH
T ss_pred cEEEEeCCH---HHHHHH----HHcCCCEEEECC------CCHH-------HHHHHHHHhCCCCeEEEECCC-CHHHHHH
Confidence 999999877 556555 578999999988 3564 556666667788999999999 9999999
Q ss_pred HHHHHHHhcCCCccCCCcceeeccchH
Q psy10250 351 WIYLVLIMLGPDWLNKDLFRIGASSLL 377 (387)
Q Consensus 351 ~i~l~~~~~Ga~w~~~~~~RIGtSs~~ 377 (387)
|. ..|+ ++||+|++.
T Consensus 269 ~a-----~~Gv-------D~isvGsli 283 (296)
T 1qap_A 269 FA-----ETGV-------DFISVGALT 283 (296)
T ss_dssp HH-----HTTC-------SEEECSHHH
T ss_pred HH-----HcCC-------CEEEEeHHH
Confidence 99 5898 699999853
No 28
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.12 E-value=2.5e-10 Score=105.93 Aligned_cols=173 Identities=17% Similarity=0.259 Sum_probs=119.1
Q ss_pred CCCCCHH--HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC-CccHHHHHHHhhhcCCCCCceEEEEec--CCCCC
Q psy10250 140 SGDDTEA--VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY-PARVVDVIKVLDRENARDDVKVASVAA--GFPSG 214 (387)
Q Consensus 140 ~~~~T~~--~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~-P~~v~~a~~~L~~~~~~~~v~v~tVvi--gFP~G 214 (387)
.|..+.+ ++.++++.+. +.|+.++++. |.+++.+++. +++++..+ + +||.+
T Consensus 28 ~p~~~~~~~~~~~~a~~~~----------------~~G~~~i~~~~~~~i~~i~~~-------~~~p~i~~-~~~~~~~~ 83 (234)
T 1yxy_A 28 EPLYSETGGIMPLMAKAAQ----------------EAGAVGIRANSVRDIKEIQAI-------TDLPIIGI-IKKDYPPQ 83 (234)
T ss_dssp STTCCTTCCSHHHHHHHHH----------------HHTCSEEEEESHHHHHHHHTT-------CCSCEEEE-CBCCCTTS
T ss_pred CCCcCCccchHHHHHHHHH----------------HCCCcEeecCCHHHHHHHHHh-------CCCCEEee-EcCCCCcc
Confidence 3566788 8999999888 5788999997 7666666543 45666555 3 78877
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCCh--hHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQW--PELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~--~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
.........+++.+++.|||.|.+- .. ..++. ..+.+.++.+++.+++ ++++++.. +.++ ++.+
T Consensus 84 ~~~i~~~~~~i~~~~~~Gad~V~l~--~~--~~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~---t~~e----a~~a 149 (234)
T 1yxy_A 84 EPFITATMTEVDQLAALNIAVIAMD--CT--KRDRHDGLDIASFIRQVKEKYPN---QLLMADIS---TFDE----GLVA 149 (234)
T ss_dssp CCCBSCSHHHHHHHHTTTCSEEEEE--CC--SSCCTTCCCHHHHHHHHHHHCTT---CEEEEECS---SHHH----HHHH
T ss_pred ccccCChHHHHHHHHHcCCCEEEEc--cc--ccCCCCCccHHHHHHHHHHhCCC---CeEEEeCC---CHHH----HHHH
Confidence 6655556788999999999977432 22 22222 3566778888877643 56888765 3344 5667
Q ss_pred HHcCCCEE-EcCCCCCCCC--CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 293 MFAGSDFI-KTSTGKEKTN--ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 293 ~~aGaDfV-KTSTGf~~~g--at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.++|+||| ++..|+.+.. ..... ++.++.+++. ++.|.++|||+|.+++..++ .+|++
T Consensus 150 ~~~Gad~i~~~v~g~~~~~~~~~~~~----~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~-----~~Gad 210 (234)
T 1yxy_A 150 HQAGIDFVGTTLSGYTPYSRQEAGPD----VALIEALCKA---GIAVIAEGKIHSPEEAKKIN-----DLGVA 210 (234)
T ss_dssp HHTTCSEEECTTTTSSTTSCCSSSCC----HHHHHHHHHT---TCCEEEESCCCSHHHHHHHH-----TTCCS
T ss_pred HHcCCCEEeeeccccCCCCcCCCCCC----HHHHHHHHhC---CCCEEEECCCCCHHHHHHHH-----HCCCC
Confidence 89999999 4666664321 11111 1344555443 68999999999999999999 58984
No 29
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.95 E-value=4.6e-10 Score=109.42 Aligned_cols=130 Identities=15% Similarity=0.062 Sum_probs=99.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCC-----eeeeecCchhhhcCChhHH---HHHHHHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 212 PSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 212 P~G~~~~e~K~~Ea~~Ai~~GAd-----EID~Vin~~~lk~g~~~~v---~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
-.=.++...|..|.+.+..-|++ +.|+|+ ++++++..+ .+.++++++.+++ .+|+++|+..+ +
T Consensus 138 ~tRkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl---e 208 (299)
T 2jbm_A 138 GTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVM----VKDNHVVAAGGVEKAVRAARQAADF--ALKVEVECSSL---Q 208 (299)
T ss_dssp CCSCCCTTCHHHHHHHHHHTTCBCCCCSTTSSEE----ECHHHHHHHTSHHHHHHHHHHHHTT--TSCEEEEESSH---H
T ss_pred ecCCCChhhHHHHHHHHHHCCCCceecCccceEE----ecccHHHHcCCHHHHHHHHHHhCCc--CCeEEEecCCH---H
Confidence 34566678999999999999999 999998 666666665 7889999988874 57999999877 5
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
++.+|+ ++|+|||+++|+ +++..+.++ +.++.. .++++|+||||| |.+++.+|. ..|+
T Consensus 209 e~~~A~----~aGaD~I~ld~~------~~~~l~~~v---~~l~~~-~~~~~I~ASGGI-t~~ni~~~~-----~aGa-- 266 (299)
T 2jbm_A 209 EAVQAA----EAGADLVLLDNF------KPEELHPTA---TVLKAQ-FPSVAVEASGGI-TLDNLPQFC-----GPHI-- 266 (299)
T ss_dssp HHHHHH----HTTCSEEEEESC------CHHHHHHHH---HHHHHH-CTTSEEEEESSC-CTTTHHHHC-----CTTC--
T ss_pred HHHHHH----HcCCCEEEECCC------CHHHHHHHH---HHhhcc-CCCeeEEEECCC-CHHHHHHHH-----HCCC--
Confidence 676655 589999999883 355433332 222221 245999999999 999999999 6888
Q ss_pred cCCCcceeeccchH
Q psy10250 364 LNKDLFRIGASSLL 377 (387)
Q Consensus 364 ~~~~~~RIGtSs~~ 377 (387)
++||++++.
T Consensus 267 -----D~i~vGs~i 275 (299)
T 2jbm_A 267 -----DVISMGMLT 275 (299)
T ss_dssp -----CEEECTHHH
T ss_pred -----CEEEEChhh
Confidence 699999854
No 30
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.91 E-value=1e-09 Score=106.76 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=88.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC-----eeeeecCchhhhcCChhH---HHHHHHHHHHHhCCCcceEEEEeeccCCCh
Q psy10250 211 FPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEKCGEKIHMKTILAVGELKTS 282 (387)
Q Consensus 211 FP~G~~~~e~K~~Ea~~Ai~~GAd-----EID~Vin~~~lk~g~~~~---v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~ 282 (387)
|..=.+++..|..|.+.+..-|++ +.|+|+ +|++++.. +.+.++++++.++. .+|+++|+..+
T Consensus 139 ~~tRkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~nh~~~~g~i~~ai~~~r~~~~~--~~~i~vev~tl--- 209 (294)
T 3c2e_A 139 AGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVM----LKDNHIWATGSITNAVKNARAVCGF--AVKIEVECLSE--- 209 (294)
T ss_dssp ECCSCCCTTCHHHHHHHHHHTTCBCCCCSTTTSEE----ECHHHHHHHSSHHHHHHHHHHHHCT--TSCEEEECSSS---
T ss_pred EecCCCChhHHHHHHHHHHhCCCCceecCccceEE----eecchhhhcCCHHHHHHHHHHhcCc--CCeEEEecCCH---
Confidence 444667789999999999999999 999998 67777766 78899999988874 57999999877
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCC------ceEeEeccCCCHHHHHHHHHHHH
Q psy10250 283 ENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKK------IGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~------~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
+++.+|+ ++|+|||+++|+ +++ .++.+.+..+++ ++|+||||| |.+++.+|.
T Consensus 210 ee~~~A~----~aGaD~I~ld~~------~~~-------~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~---- 267 (294)
T 3c2e_A 210 DEATEAI----EAGADVIMLDNF------KGD-------GLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYL---- 267 (294)
T ss_dssp HHHHHHH----HHTCSEEECCC----------------------------------CCEEEEECCC-CC------C----
T ss_pred HHHHHHH----HcCCCEEEECCC------CHH-------HHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHH----
Confidence 5676665 579999999883 243 333333444434 999999999 999999999
Q ss_pred HhcCCCccCCCcceeeccch
Q psy10250 357 IMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIGtSs~ 376 (387)
..|+ ++||+++.
T Consensus 268 -~~Gv-------D~i~vGs~ 279 (294)
T 3c2e_A 268 -CDDI-------DIYSTSSI 279 (294)
T ss_dssp -CCSC-------SEEECGGG
T ss_pred -HcCC-------CEEEEech
Confidence 6888 69999875
No 31
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.89 E-value=6.1e-10 Score=107.21 Aligned_cols=131 Identities=13% Similarity=0.075 Sum_probs=98.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC-----eeeeecCchhhhcCChhHH---HHHHHHHHHHhCCCcceEEEEeeccCCCh
Q psy10250 211 FPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCGEKIHMKTILAVGELKTS 282 (387)
Q Consensus 211 FP~G~~~~e~K~~Ea~~Ai~~GAd-----EID~Vin~~~lk~g~~~~v---~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~ 282 (387)
|-.=.+++..|..|.+.+..-|++ +.|+|+ +|++++..+ .+.++++++.+++ .+|+++|+..+
T Consensus 122 ~~tRkt~p~~r~~~~~A~~~gG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl--- 192 (273)
T 2b7n_A 122 LDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALM----LKDTHLRHVKDLKSFLTHARKNLPF--TAKIEIECESF--- 192 (273)
T ss_dssp ECCSCCCTTCHHHHHHHHHTTTCCCCCSSTTTCEE----ECHHHHTTCSSHHHHHHHHGGGSCT--TCCEEEEESSH---
T ss_pred EEcCCCChhhHHHHHHHHHhCCCcceEcCccceEE----eeCCHHHHhCCHHHHHHHHHHhCCC--CceEEEEcCCH---
Confidence 445667789999999999999999 999998 565555543 7788888877653 57999999876
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 283 ENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+++.+|+ ++|+|||+++|+ +++..+.++ +.++.. -++++|+||||| |.+++.+|. ..|+
T Consensus 193 ee~~~A~----~aGaD~I~ld~~------~~~~l~~~v---~~l~~~-~~~~~i~AsGGI-~~~ni~~~~-----~aGa- 251 (273)
T 2b7n_A 193 EEAKNAM----NAGADIVMCDNL------SVLETKEIA---AYRDAH-YPFVLLEASGNI-SLESINAYA-----KSGV- 251 (273)
T ss_dssp HHHHHHH----HHTCSEEEEETC------CHHHHHHHH---HHHHHH-CTTCEEEEESSC-CTTTHHHHH-----TTTC-
T ss_pred HHHHHHH----HcCCCEEEECCC------CHHHHHHHH---HHhhcc-CCCcEEEEECCC-CHHHHHHHH-----HcCC-
Confidence 5676655 579999999883 355433332 222222 245999999999 999999999 6898
Q ss_pred ccCCCcceeeccchH
Q psy10250 363 WLNKDLFRIGASSLL 377 (387)
Q Consensus 363 w~~~~~~RIGtSs~~ 377 (387)
++||+++..
T Consensus 252 ------D~i~vGs~i 260 (273)
T 2b7n_A 252 ------DAISVGALI 260 (273)
T ss_dssp ------SEEECTHHH
T ss_pred ------cEEEEcHHh
Confidence 699998863
No 32
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.86 E-value=3.7e-09 Score=102.90 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=67.4
Q ss_pred HHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccC----CCCHHHHHHHHHHHHHcCCC
Q psy10250 14 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGE----LKTSENIYYASMTAMFAGSD 89 (387)
Q Consensus 14 ~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~----L~~~e~i~~a~~~a~~ag~d 89 (387)
.++++|+++|||++|+++|++ ++++.+..+|+.++++.|+.. -+++|+|++. ..+++.+..+|++|.++|+|
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~G---s~~~~~~l~~i~~v~~~a~~~-GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD 204 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIG---SEYEHQSIKNIIQLVDAGMKV-GMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHTT-TCCEEEEECC----CCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEEEECC---CCcHHHHHHHHHHHHHHHHHc-CCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999998 889999999999999999752 4789999854 13556678899999999999
Q ss_pred EEecC
Q psy10250 90 FIKTS 94 (387)
Q Consensus 90 fvKTS 94 (387)
||||+
T Consensus 205 ~VKt~ 209 (295)
T 3glc_A 205 IIKTY 209 (295)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99998
No 33
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.32 E-value=5.3e-06 Score=80.06 Aligned_cols=138 Identities=9% Similarity=0.055 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHHCCCC-eeeeecCchhh-----hcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQKVD-EVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 289 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAd-EID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~ 289 (387)
...+.=..-++.+.+.|+| -|++=++-... ..++.+.+.+-++++++.++-+..+|+ .+.+ +.+++.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi---~~~~-~~~~~~~~a 178 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKL---PPYF-DLVHFDIMA 178 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEE---CCCC-SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEE---CCCC-CHHHHHHHH
Confidence 3455556667777788999 77763320111 124777888888888877643466775 3446 677888889
Q ss_pred HHHHHcCCCEEEcCCCCC---------C----------CCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHH
Q psy10250 290 MTAMFAGSDFIKTSTGKE---------K----------TNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSV 349 (387)
Q Consensus 290 ~ia~~aGaDfVKTSTGf~---------~----------~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~ 349 (387)
+.+.++|+|+|..+...+ . +|- .....-.-.+.++.+++.+++++.|-++|||+|.++|.
T Consensus 179 ~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~ 258 (311)
T 1jub_A 179 EILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAF 258 (311)
T ss_dssp HHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHH
T ss_pred HHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHH
Confidence 999999999998764320 0 000 00001112356777777777789999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy10250 350 RWIYLVLIMLGPD 362 (387)
Q Consensus 350 ~~i~l~~~~~Ga~ 362 (387)
+++ .+|++
T Consensus 259 ~~l-----~~GAd 266 (311)
T 1jub_A 259 EHL-----LCGAT 266 (311)
T ss_dssp HHH-----HHTCS
T ss_pred HHH-----HcCCC
Confidence 999 48984
No 34
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.30 E-value=2.7e-07 Score=87.31 Aligned_cols=80 Identities=23% Similarity=0.242 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEecc--------CCCCHHHHHHHHH
Q psy10250 10 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVG--------ELKTSENIYYASM 81 (387)
Q Consensus 10 ~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~--------~L~~~e~i~~a~~ 81 (387)
+.+..++++|++.||+.|||++|.+ +.+++++.+++++++++|+. .-+++|+|+. .+ +.+++..+++
T Consensus 99 ~~~~~~v~~a~~~Ga~~v~~~l~~~---~~~~~~~~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~-~~~~~~~~a~ 173 (273)
T 2qjg_A 99 KVIVTTVEEAIRMGADAVSIHVNVG---SDEDWEAYRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNER-DPELVAHAAR 173 (273)
T ss_dssp CEECSCHHHHHHTTCSEEEEEEEET---STTHHHHHHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTT-CHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCEEEEEEecC---CCCHHHHHHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCC-CHhHHHHHHH
Confidence 4567889999999999999999987 45788899999999999874 3467888872 14 5678888889
Q ss_pred HHHHcCCCEEecC
Q psy10250 82 TAMFAGSDFIKTS 94 (387)
Q Consensus 82 ~a~~ag~dfvKTS 94 (387)
.+.++|+|||+++
T Consensus 174 ~a~~~Gad~i~~~ 186 (273)
T 2qjg_A 174 LGAELGADIVKTS 186 (273)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEC
Confidence 9999999999997
No 35
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.20 E-value=3.8e-05 Score=75.01 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=81.9
Q ss_pred HCCCCeeeeec---Cc--hhhhcCChhHHHHHHHHHHHHh---------CCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 230 KQKVDEVDIVI---QR--SLVLNNQWPELFSEVKQMKEKC---------GEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 230 ~~GAdEID~Vi---n~--~~lk~g~~~~v~~Ei~~v~~~~---------~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
..|+|-|++=+ |. .... .+.+.+.+-+++|++++ .-+..+|+ ++.+ +++++...++.+.++
T Consensus 163 ~~g~d~iein~~sP~~~g~~~~-~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi---~~~~-~~~~~~~~a~~l~~~ 237 (336)
T 1f76_A 163 YAYAGYIAINISSPNTPGLRTL-QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI---APDL-SEEELIQVADSLVRH 237 (336)
T ss_dssp GGGCSEEEEECCCSSSTTGGGG-GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC---CSCC-CHHHHHHHHHHHHHT
T ss_pred hccCCEEEEEccCCCCCCcccc-cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEe---cCCC-CHHHHHHHHHHHHHc
Confidence 34888776643 21 1112 24666777888888887 22456673 4556 567888899999999
Q ss_pred CCCEEEcC-CCCCC------------CCCC-hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 296 GSDFIKTS-TGKEK------------TNAT-IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 296 GaDfVKTS-TGf~~------------~gat-~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
|+|+|.-| |+++. +|-+ ......-++.++.+++.+++++.|.++|||+|.++|.+++ .+|+
T Consensus 238 Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l-----~~GA 312 (336)
T 1f76_A 238 NIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKI-----AAGA 312 (336)
T ss_dssp TCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHH-----HHTC
T ss_pred CCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH-----HCCC
Confidence 99999854 32211 0100 1001122356777888888889999999999999999999 4798
Q ss_pred C
Q psy10250 362 D 362 (387)
Q Consensus 362 ~ 362 (387)
+
T Consensus 313 d 313 (336)
T 1f76_A 313 S 313 (336)
T ss_dssp S
T ss_pred C
Confidence 4
No 36
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.19 E-value=1.1e-05 Score=77.99 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHCCCC---eeeeecCchhhh-----cCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 217 LLETRLHEIELLAKQKVD---EVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAd---EID~Vin~~~lk-----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
..+.=..-++.+.+.|+| -|++=+.-...+ .++.+.+.+-++++++.++-+..+|+ .+.+ +.+++.+.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~---~~~~-~~~~~~~~ 179 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM---PPYF-DIAHFDTA 179 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE---CCCC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE---CCCC-CHHHHHHH
Confidence 445555556666667877 666533211111 23778888999999988753466775 3446 67788889
Q ss_pred HHHHHHcC-CCEEEcCCCCC-------------------CCCCChh-hhHhHHHHHHHHHHHcCCCceEeEeccCCCHHH
Q psy10250 289 SMTAMFAG-SDFIKTSTGKE-------------------KTNATIP-AGIIMCSAIKHFHKLSGKKIGLKPAGGISTFED 347 (387)
Q Consensus 289 ~~ia~~aG-aDfVKTSTGf~-------------------~~gat~~-~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~ 347 (387)
++.+.++| +|||..+...+ .+|.+-. ..-.-.+.++.+++.+ +++.|-++|||+|.++
T Consensus 180 a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~d 258 (314)
T 2e6f_A 180 AAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGED 258 (314)
T ss_dssp HHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHH
T ss_pred HHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHH
Confidence 99999999 99998664321 0011100 0011235677777777 6899999999999999
Q ss_pred HHHHHHHHHHhcCCC
Q psy10250 348 SVRWIYLVLIMLGPD 362 (387)
Q Consensus 348 a~~~i~l~~~~~Ga~ 362 (387)
+.+++ .+|++
T Consensus 259 a~~~l-----~~GAd 268 (314)
T 2e6f_A 259 AFLHI-----LAGAS 268 (314)
T ss_dssp HHHHH-----HHTCS
T ss_pred HHHHH-----HcCCC
Confidence 99999 48984
No 37
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.04 E-value=9.8e-05 Score=73.69 Aligned_cols=133 Identities=16% Similarity=0.082 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCch-----hh-hcCChhHHHHHHHHHHHH-------hCCCcceEEEEeeccCCChHHH
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRS-----LV-LNNQWPELFSEVKQMKEK-------CGEKIHMKTILAVGELKTSENI 285 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~-----~l-k~g~~~~v~~Ei~~v~~~-------~~~~~~lKvIlEt~~L~t~e~i 285 (387)
..-..++-+.+..++|.||+ |++ -+ .-++.+.+.+=+++++++ ..-++.+|+ ...+ +++++
T Consensus 163 ~~dy~~~~~~~~~~ad~iel--NisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi---~p~~-~~~~~ 236 (367)
T 3zwt_A 163 AEDYAEGVRVLGPLADYLVV--NVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKI---APDL-TSQDK 236 (367)
T ss_dssp HHHHHHHHHHHGGGCSEEEE--ECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEE---CSCC-CHHHH
T ss_pred HHHHHHHHHHHhhhCCEEEE--ECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEe---CCCC-CHHHH
Confidence 34444555555667888775 443 11 113445566666667654 222466776 3556 67789
Q ss_pred HHHHHHHHHcCCCEEE-cCCCCC------------CCCCChhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHH
Q psy10250 286 YCASMTAMFAGSDFIK-TSTGKE------------KTNATIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVK-TSTGf~------------~~gat~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
...++.+.++|+|+|. |.|..+ .+|-+-..+ ..-.+.|+.+++.+++++.|-++|||+|.++|.++
T Consensus 237 ~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~ 316 (367)
T 3zwt_A 237 EDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEK 316 (367)
T ss_dssp HHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHH
Confidence 9999999999999998 334321 112111111 12235678888888889999999999999999999
Q ss_pred HHHHHHhcCCC
Q psy10250 352 IYLVLIMLGPD 362 (387)
Q Consensus 352 i~l~~~~~Ga~ 362 (387)
+ .+|++
T Consensus 317 l-----~~GAd 322 (367)
T 3zwt_A 317 I-----RAGAS 322 (367)
T ss_dssp H-----HHTCS
T ss_pred H-----HcCCC
Confidence 9 48984
No 38
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.01 E-value=0.00013 Score=72.04 Aligned_cols=127 Identities=12% Similarity=0.102 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecC----------chhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQ----------RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin----------~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.+.=..-++.+.+.|+|+||+-+. +|.-+..+.+.+.+-+++++++++-++.+|+=+-.....+.++...
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHH
Confidence 344455567777889999998752 3444556788899999999988853344444322212223346677
Q ss_pred HHHHHHHcCCCEEEcCCCC-----CCC------CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 288 ASMTAMFAGSDFIKTSTGK-----EKT------NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf-----~~~------gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
.++.+.++|+|+|..+.+. .+. +.+. +.++.+++.+ .++.|-++|||+|.+++.+++
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~-------~~i~~ik~~~-~~iPVianGgI~s~eda~~~l 216 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRH-------DWVHRLKGDF-PQLTFVTNGGIRSLEEALFHL 216 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC----------CCCCCH-------HHHHHHHHHC-TTSEEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCchhcccCcccccCCCcccH-------HHHHHHHHhC-CCCeEEEECCcCCHHHHHHHH
Confidence 7889999999999886642 211 1122 3566666665 368899999999999999998
No 39
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.90 E-value=0.00012 Score=72.89 Aligned_cols=117 Identities=22% Similarity=0.316 Sum_probs=77.7
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-| ++|.+ .|+.+.+.+.++.+++.. + ++||+-+. .+.++ ++.+.++|+|||+
T Consensus 107 ~e~a~~l~eaGad~I--~ld~a---~G~~~~~~~~i~~i~~~~-~---~~Vivg~v--~t~e~----A~~l~~aGaD~I~ 171 (361)
T 3khj_A 107 IERAKLLVEAGVDVI--VLDSA---HGHSLNIIRTLKEIKSKM-N---IDVIVGNV--VTEEA----TKELIENGADGIK 171 (361)
T ss_dssp HHHHHHHHHTTCSEE--EECCS---CCSBHHHHHHHHHHHHHC-C---CEEEEEEE--CSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCcCeE--EEeCC---CCCcHHHHHHHHHHHHhc-C---CcEEEccC--CCHHH----HHHHHHcCcCEEE
Confidence 677888999999975 45654 377788888899998866 2 56676322 25453 4667899999999
Q ss_pred cCCCCCCCCCC-------hhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKTNAT-------IPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~gat-------~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+.|-+....| .+.. ..++.+.+... .++.|-++|||++.+++.+++ .+|++
T Consensus 172 VG~~~Gs~~~tr~~~g~g~p~~----~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal-----a~GAd 231 (361)
T 3khj_A 172 VGIGPGSICTTRIVAGVGVPQI----TAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL-----AVGAS 231 (361)
T ss_dssp ECSSCCTTCCHHHHTCBCCCHH----HHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH-----HHTCS
T ss_pred EecCCCcCCCcccccCCCCCcH----HHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH-----HcCCC
Confidence 85433221111 1221 23333332221 258899999999999999999 48985
No 40
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.74 E-value=0.00026 Score=70.16 Aligned_cols=135 Identities=13% Similarity=0.064 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHCCCC-eeeeecCch-------hhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 217 LLETRLHEIELLAKQKVD-EVDIVIQRS-------LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAd-EID~Vin~~-------~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
..+.=+.-++.+-+.|++ .||+ |++ .-...+.+.+.+=+++|++++.-++.+|+=. .+ +.+++.++
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~iel--NisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p---~~-~~~~~a~~ 212 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVEL--NLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPP---YF-DIVHFDQA 212 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEE--ECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC---CC-CHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCcEEEE--ecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECC---CC-CHHHHHHH
Confidence 344433344444446876 6654 554 1122456777777777777665456778754 35 67888888
Q ss_pred HHHHHHcCCCEEEcCC--CC---------------CCCCCChhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHH
Q psy10250 289 SMTAMFAGSDFIKTST--GK---------------EKTNATIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVR 350 (387)
Q Consensus 289 ~~ia~~aGaDfVKTST--Gf---------------~~~gat~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~ 350 (387)
++.+-..|.++|.|.. |. ..+|-+-+.+ .+-.+.|+.+++.+++++.|-++|||+|.+||.+
T Consensus 213 ~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~ 292 (345)
T 3oix_A 213 AAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFE 292 (345)
T ss_dssp HHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHH
T ss_pred HHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHH
Confidence 8888888888887762 10 0011111111 1123567777888877899999999999999999
Q ss_pred HHHHHHHhcCCC
Q psy10250 351 WIYLVLIMLGPD 362 (387)
Q Consensus 351 ~i~l~~~~~Ga~ 362 (387)
++ .+|++
T Consensus 293 ~l-----~aGAd 299 (345)
T 3oix_A 293 HI-----LCGAS 299 (345)
T ss_dssp HH-----HHTCS
T ss_pred HH-----HhCCC
Confidence 99 58984
No 41
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.72 E-value=0.00018 Score=68.85 Aligned_cols=128 Identities=16% Similarity=0.094 Sum_probs=77.7
Q ss_pred HHHHHHHHH--CCCCeeeeecCchhhhc------CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 222 LHEIELLAK--QKVDEVDIVIQRSLVLN------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 222 ~~Ea~~Ai~--~GAdEID~Vin~~~lk~------g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
..++...+. .|+|.|++-++-...+. ++.+.+.+-++++++.++-+..+|+. ..+.+ +...++.+.
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~---~~~~~---~~~~a~~l~ 186 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLS---PNVTD---IVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEEC---SCSSC---SHHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEEC---CChHH---HHHHHHHHH
Confidence 334444444 79998877544222222 36677888889998877534556654 23322 334567788
Q ss_pred HcCCCEEEcCCC---CC--C-----------CCCChhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 294 FAGSDFIKTSTG---KE--K-----------TNATIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 294 ~aGaDfVKTSTG---f~--~-----------~gat~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
++|+|+|..+-+ .. . +|.+-+.. -...+.++.+++.+ ++.|-++|||+|.+++.+++
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l---- 260 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMY---- 260 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHH----
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHH----
Confidence 999999997531 10 0 00011110 01124555555543 68899999999999999999
Q ss_pred HhcCCC
Q psy10250 357 IMLGPD 362 (387)
Q Consensus 357 ~~~Ga~ 362 (387)
.+|++
T Consensus 261 -~~GAd 265 (311)
T 1ep3_A 261 -MAGAS 265 (311)
T ss_dssp -HHTCS
T ss_pred -HcCCC
Confidence 47985
No 42
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.71 E-value=0.00039 Score=71.34 Aligned_cols=119 Identities=18% Similarity=0.260 Sum_probs=80.9
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++++++.|++-|.+-.+ .|++....+.++.+++.+++ +.||+... + +.++. +.+.++|+|||+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~-----~G~~~~~~e~i~~i~~~~p~---~pvi~g~~-~-t~e~a----~~l~~~G~d~I~ 304 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA-----HGHSRRVIETLEMIKADYPD---LPVVAGNV-A-TPEGT----EALIKAGADAVK 304 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS-----CCSSHHHHHHHHHHHHHCTT---SCEEEEEE-C-SHHHH----HHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCEEEEEec-----CCchHHHHHHHHHHHHHCCC---ceEEeCCc-C-CHHHH----HHHHHcCCCEEE
Confidence 34788899999999777544 36777888999999998864 44565432 4 55544 566789999999
Q ss_pred cCCCCCCCC-------CChhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 302 TSTGKEKTN-------ATIPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 302 TSTGf~~~g-------at~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
.|.|-+... ...+.. ..+..+.+..+ .++.|-++|||++..++.+++ .+|+++
T Consensus 305 v~~~~G~~~~~~~~~~~g~p~~----~~l~~v~~~~~~~~ipvia~GGI~~~~di~kal-----a~GAd~ 365 (494)
T 1vrd_A 305 VGVGPGSICTTRVVAGVGVPQL----TAVMECSEVARKYDVPIIADGGIRYSGDIVKAL-----AAGAES 365 (494)
T ss_dssp ECSSCSTTCHHHHHHCCCCCHH----HHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-----HTTCSE
T ss_pred EcCCCCccccccccCCCCccHH----HHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHH-----HcCCCE
Confidence 976543211 111111 23333333332 378899999999999999999 589863
No 43
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.63 E-value=0.0018 Score=58.80 Aligned_cols=175 Identities=13% Similarity=0.168 Sum_probs=97.3
Q ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-CCccHHHHHHHhhhcCCCCCceEEEE-ecCCCCCCCCH
Q psy10250 141 GDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-YPARVVDVIKVLDRENARDDVKVASV-AAGFPSGQYLL 218 (387)
Q Consensus 141 ~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-~P~~v~~a~~~L~~~~~~~~v~v~tV-vigFP~G~~~~ 218 (387)
|....++..++.+.+. +-|...+-+ .|..++..++. ++.++..+ --.||.+.-..
T Consensus 18 p~~~~~~~~~~a~~~~----------------~~Ga~~i~~~~~~~i~~i~~~-------~~~pv~~~~~~~~~~~~~~i 74 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAY----------------EGGAVGIRANTKEDILAIKET-------VDLPVIGIVKRDYDHSDVFI 74 (223)
T ss_dssp TTCCHHHHHHHHHHHH----------------HHTCSEEEEESHHHHHHHHHH-------CCSCEEEECBCCCTTCCCCB
T ss_pred CCCCCccHHHHHHHHH----------------HCCCeeeccCCHHHHHHHHHh-------cCCCEEeeeccCCCcccccc
Confidence 4446666777766665 234444433 34444444443 34454222 11244322211
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD 298 (387)
.--..+++.+++.|||-|- +......+-+ +.+.+-++.+++..++ .+++++.. +.++.. .+.++|+|
T Consensus 75 ~~~~~~i~~~~~~Gad~v~--l~~~~~~~p~-~~~~~~i~~~~~~~~~---~~v~~~~~---t~~e~~----~~~~~G~d 141 (223)
T 1y0e_A 75 TATSKEVDELIESQCEVIA--LDATLQQRPK-ETLDELVSYIRTHAPN---VEIMADIA---TVEEAK----NAARLGFD 141 (223)
T ss_dssp SCSHHHHHHHHHHTCSEEE--EECSCSCCSS-SCHHHHHHHHHHHCTT---SEEEEECS---SHHHHH----HHHHTTCS
T ss_pred CCcHHHHHHHHhCCCCEEE--EeeecccCcc-cCHHHHHHHHHHhCCC---ceEEecCC---CHHHHH----HHHHcCCC
Confidence 1123567788899998653 3333322211 3344556667766643 35555442 555543 36789999
Q ss_pred EEEcCC-CCCCC--CC--ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 299 FIKTST-GKEKT--NA--TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 299 fVKTST-Gf~~~--ga--t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
||.++. ||... +. ... -++.++.+++.+ ++.|=++|||+|.+++..++ .+|++
T Consensus 142 ~i~~~~~g~t~~~~~~~~~~~----~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~-----~~Gad 199 (223)
T 1y0e_A 142 YIGTTLHGYTSYTQGQLLYQN----DFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVM-----DLGVH 199 (223)
T ss_dssp EEECTTTTSSTTSTTCCTTHH----HHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred EEEeCCCcCcCCCCCCCCCcc----cHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHH-----HcCCC
Confidence 999865 44321 11 111 124455666554 58888999999999999999 58985
No 44
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.61 E-value=0.00093 Score=66.54 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=66.5
Q ss_pred ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC----CCCCChhhhHhHHHHHH
Q psy10250 249 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE----KTNATIPAGIIMCSAIK 324 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~----~~gat~~~~~~m~~~v~ 324 (387)
+.....++|+.+++..+.+..+|-+ + +.+. ++.+.++|+|+|.-|..-+ .+.++. +.+.
T Consensus 213 d~~~~~~~i~~lr~~~~~PvivK~v-----~-~~e~----a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-------~~l~ 275 (368)
T 2nli_A 213 KQKISPRDIEEIAGHSGLPVFVKGI-----Q-HPED----ADMAIKRGASGIWVSNHGARQLYEAPGSF-------DTLP 275 (368)
T ss_dssp CSBCCHHHHHHHHHHSSSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEECCGGGTSCSSCCCHH-------HHHH
T ss_pred CchhhHHHHHHHHHHcCCCEEEEcC-----C-CHHH----HHHHHHcCCCEEEEcCCCcCCCCCCCChH-------HHHH
Confidence 3444557799999888655788854 3 4443 4678899999999875321 112233 4566
Q ss_pred HHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 325 HFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 325 ~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+++.+++++.|=++||||+.+++.+++ .+|++
T Consensus 276 ~v~~~v~~~ipVia~GGI~~g~D~~kal-----alGAd 308 (368)
T 2nli_A 276 AIAERVNKRVPIVFDSGVRRGEHVAKAL-----ASGAD 308 (368)
T ss_dssp HHHHHHTTSSCEEECSSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHhCCCCeEEEECCCCCHHHHHHHH-----HcCCC
Confidence 6667777789999999999999999999 58985
No 45
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.56 E-value=0.0024 Score=63.65 Aligned_cols=115 Identities=20% Similarity=0.237 Sum_probs=72.6
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-|. +|... |....+.+.|+.+++..++ ++||.-+ -. |.++ ++.+.++|+|+|+
T Consensus 102 ~e~~~~a~~aGvdvI~--id~a~---G~~~~~~e~I~~ir~~~~~---~~Vi~G~-V~-T~e~----A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 102 LQRAEALRDAGADFFC--VDVAH---AHAKYVGKTLKSLRQLLGS---RCIMAGN-VA-TYAG----ADYLASCGADIIK 167 (361)
T ss_dssp HHHHHHHHHTTCCEEE--EECSC---CSSHHHHHHHHHHHHHHTT---CEEEEEE-EC-SHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEE--EeCCC---CCcHhHHHHHHHHHHhcCC---CeEEEcC-cC-CHHH----HHHHHHcCCCEEE
Confidence 3457778888888443 33321 4456677888999987754 5666622 13 5553 5678899999999
Q ss_pred cCCCCCCC-------CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKT-------NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~-------gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.|.|-+.. |...+ .+..|+...+.. ..|=+.|||++..++.+.+ .+||+
T Consensus 168 Vg~g~G~~~~tr~~~g~g~p----~l~aI~~~~~~~---~PVIAdGGI~~~~di~kAL-----a~GAd 223 (361)
T 3r2g_A 168 AGIGGGSVCSTRIKTGFGVP----MLTCIQDCSRAD---RSIVADGGIKTSGDIVKAL-----AFGAD 223 (361)
T ss_dssp ECCSSSSCHHHHHHHCCCCC----HHHHHHHHTTSS---SEEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred EcCCCCcCccccccCCccHH----HHHHHHHHHHhC---CCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 86542211 11111 123444332222 2799999999999999999 58986
No 46
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.55 E-value=0.00025 Score=70.43 Aligned_cols=121 Identities=12% Similarity=0.009 Sum_probs=81.3
Q ss_pred HCCCCeeeeecCch-------hhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC-CCEEE
Q psy10250 230 KQKVDEVDIVIQRS-------LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG-SDFIK 301 (387)
Q Consensus 230 ~~GAdEID~Vin~~-------~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG-aDfVK 301 (387)
+.|+|.||+ |++ .-+..+.+.+.+-+++|+++..-++.+|+-. .+ +++++.++++++.++| +|+|-
T Consensus 153 ~~g~d~iel--NisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p---~~-d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 153 TEKGVILEL--NLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP---YF-DFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp HHHCCEEEE--ECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC---CC-SHHHHHHHHHHHHTCTTEEEEE
T ss_pred hcCCCEEEE--eCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC---CC-CHHHHHHHHHHHHhCCCccEEE
Confidence 358998775 443 1122366888888888988876557788765 45 5788999999999998 99996
Q ss_pred cCCCC-------------------CCCCCChhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 302 TSTGK-------------------EKTNATIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 302 TSTGf-------------------~~~gat~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
.+.-+ ..+|-+-..+ .+-.+.|+.+++. .+++.|-+.|||+|.++|.+++ .+|+
T Consensus 227 ~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ipII~~GGI~s~~da~~~l-----~aGA 300 (354)
T 4ef8_A 227 CINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKLIFGCGGVYTGEDAFLHV-----LAGA 300 (354)
T ss_dssp ECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSEEEEESCCCSHHHHHHHH-----HHTE
T ss_pred EecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCCEEEECCcCCHHHHHHHH-----HcCC
Confidence 32111 0011111111 1123456666666 4579999999999999999999 4898
Q ss_pred C
Q psy10250 362 D 362 (387)
Q Consensus 362 ~ 362 (387)
+
T Consensus 301 d 301 (354)
T 4ef8_A 301 S 301 (354)
T ss_dssp E
T ss_pred C
Confidence 4
No 47
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.55 E-value=0.0007 Score=63.22 Aligned_cols=174 Identities=13% Similarity=0.161 Sum_probs=102.2
Q ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC-CccHHHHHHHhhhcCCCCCceEEEE-ecCCCCCCCCH
Q psy10250 141 GDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY-PARVVDVIKVLDRENARDDVKVASV-AAGFPSGQYLL 218 (387)
Q Consensus 141 ~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~-P~~v~~a~~~L~~~~~~~~v~v~tV-vigFP~G~~~~ 218 (387)
|-.+..++.++...+. +.|..++-+. |.+++.+++. .+++|-.+ -..||.-.-..
T Consensus 31 pl~~~~~~~~~A~a~~----------------~~Ga~~i~~~~~~~i~~ir~~-------v~~Pvig~~k~d~~~~~~~I 87 (232)
T 3igs_A 31 PLDKPEIVAAMALAAE----------------QAGAVAVRIEGIDNLRMTRSL-------VSVPIIGIIKRDLDESPVRI 87 (232)
T ss_dssp TTCSHHHHHHHHHHHH----------------HTTCSEEEEESHHHHHHHHTT-------CCSCEEEECBCCCSSCCCCB
T ss_pred CCCCcchHHHHHHHHH----------------HCCCeEEEECCHHHHHHHHHh-------cCCCEEEEEeecCCCcceEe
Confidence 3446778888877777 4566666654 4455444432 45665332 12343211111
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD 298 (387)
.--..+++++++.|||-| +++-...++ .+.+.+-++.+++ .-+.++.+.. +.++. +.+.++|+|
T Consensus 88 ~~~~~~i~~~~~~Gad~V--~l~~~~~~~--p~~l~~~i~~~~~-----~g~~v~~~v~---t~eea----~~a~~~Gad 151 (232)
T 3igs_A 88 TPFLDDVDALAQAGAAII--AVDGTARQR--PVAVEALLARIHH-----HHLLTMADCS---SVDDG----LACQRLGAD 151 (232)
T ss_dssp SCSHHHHHHHHHHTCSEE--EEECCSSCC--SSCHHHHHHHHHH-----TTCEEEEECC---SHHHH----HHHHHTTCS
T ss_pred CccHHHHHHHHHcCCCEE--EECccccCC--HHHHHHHHHHHHH-----CCCEEEEeCC---CHHHH----HHHHhCCCC
Confidence 112457888999999964 445443332 2334444444443 1367777764 44544 456789999
Q ss_pred EEEc-CCCCCCC----CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 299 FIKT-STGKEKT----NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 299 fVKT-STGf~~~----gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
||-+ ..||... ++++ +-++.+++. ++.|=++|||+|.+++.+++ .+|++ ..-+|+
T Consensus 152 ~Ig~~~~g~t~~~~~~~~~~-------~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~-----~~Gad-----gV~VGs 211 (232)
T 3igs_A 152 IIGTTMSGYTTPDTPEEPDL-------PLVKALHDA---GCRVIAEGRYNSPALAAEAI-----RYGAW-----AVTVGS 211 (232)
T ss_dssp EEECTTTTSSSSSCCSSCCH-------HHHHHHHHT---TCCEEEESCCCSHHHHHHHH-----HTTCS-----EEEECH
T ss_pred EEEEcCccCCCCCCCCCCCH-------HHHHHHHhc---CCcEEEECCCCCHHHHHHHH-----HcCCC-----EEEEeh
Confidence 9974 3455322 2333 344555443 67888999999999999999 58985 566774
No 48
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.40 E-value=0.0016 Score=65.51 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=63.9
Q ss_pred ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCC-CCCChhhhHhHHHHHHHHH
Q psy10250 249 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEK-TNATIPAGIIMCSAIKHFH 327 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~-~gat~~~~~~m~~~v~~~~ 327 (387)
+.+...++|+.+++..+.+..+|-+ + +.+. ++.+.++|+|+|-.|..-+. ....+.. .+.+..++
T Consensus 236 d~~~~~~~i~~lr~~~~~PvivKgv-----~-~~e~----A~~a~~aGad~I~vs~~ggr~~~~g~~~----~~~l~~v~ 301 (392)
T 2nzl_A 236 DPSISWEDIKWLRRLTSLPIVAKGI-----L-RGDD----AREAVKHGLNGILVSNHGARQLDGVPAT----IDVLPEIV 301 (392)
T ss_dssp CTTCCHHHHHHHC--CCSCEEEEEE-----C-CHHH----HHHHHHTTCCEEEECCGGGTSSTTCCCH----HHHHHHHH
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEec-----C-CHHH----HHHHHHcCCCEEEeCCCCCCcCCCCcCh----HHHHHHHH
Confidence 3344566788888877655778854 3 4443 56788999999998642211 0111111 24556666
Q ss_pred HHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 328 KLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 328 ~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.+++++.|=++||||+.+|+.+++ .+||+
T Consensus 302 ~av~~~ipVia~GGI~~g~Dv~kal-----alGAd 331 (392)
T 2nzl_A 302 EAVEGKVEVFLDGGVRKGTDVLKAL-----ALGAK 331 (392)
T ss_dssp HHHTTSSEEEECSSCCSHHHHHHHH-----HTTCS
T ss_pred HHcCCCCEEEEECCCCCHHHHHHHH-----HhCCC
Confidence 6777789999999999999999999 58985
No 49
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.37 E-value=0.0025 Score=59.36 Aligned_cols=174 Identities=14% Similarity=0.150 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC-CccHHHHHHHhhhcCCCCCceEEEEe-cCCCCCCCCH
Q psy10250 141 GDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY-PARVVDVIKVLDRENARDDVKVASVA-AGFPSGQYLL 218 (387)
Q Consensus 141 ~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~-P~~v~~a~~~L~~~~~~~~v~v~tVv-igFP~G~~~~ 218 (387)
|-.++.++.++...+. +-|..++-+. |.++..+++. .+++|-.+. -.||.-.-..
T Consensus 31 pl~~~~~~~~~A~a~~----------------~~Ga~~i~~~~~~~i~~ir~~-------v~~Pvig~~k~~~~~~~~~I 87 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAA----------------SAGAVAVRIEGIENLRTVRPH-------LSVPIIGIIKRDLTGSPVRI 87 (229)
T ss_dssp TTCSHHHHHHHHHHHH----------------HTTCSEEEEESHHHHHHHGGG-------CCSCEEEECBCCCSSCCCCB
T ss_pred CCCCcchHHHHHHHHH----------------HCCCcEEEECCHHHHHHHHHh-------cCCCEEEEEeecCCCCceEe
Confidence 4456778888877777 4566666553 3344433332 456654331 2344311111
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD 298 (387)
.--..+++++++.|||-| +++-...++ .+.+.+-++.+++ .-+.++.+.. +.++. +.+.++|+|
T Consensus 88 ~~~~~~i~~~~~aGad~I--~l~~~~~~~--p~~l~~~i~~~~~-----~g~~v~~~v~---t~eea----~~a~~~Gad 151 (229)
T 3q58_A 88 TPYLQDVDALAQAGADII--AFDASFRSR--PVDIDSLLTRIRL-----HGLLAMADCS---TVNEG----ISCHQKGIE 151 (229)
T ss_dssp SCSHHHHHHHHHHTCSEE--EEECCSSCC--SSCHHHHHHHHHH-----TTCEEEEECS---SHHHH----HHHHHTTCS
T ss_pred CccHHHHHHHHHcCCCEE--EECccccCC--hHHHHHHHHHHHH-----CCCEEEEecC---CHHHH----HHHHhCCCC
Confidence 112457888999999965 445443332 2344444444443 1367777765 44544 446789999
Q ss_pred EEEc-CCCCCCC----CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 299 FIKT-STGKEKT----NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 299 fVKT-STGf~~~----gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
||-| .-||... ++++ +.++.+++. ++.|=++|||+|.+++.+++ .+|++ ..-+|+
T Consensus 152 ~Ig~~~~g~t~~~~~~~~~~-------~li~~l~~~---~ipvIA~GGI~t~~d~~~~~-----~~Gad-----gV~VGs 211 (229)
T 3q58_A 152 FIGTTLSGYTGPITPVEPDL-------AMVTQLSHA---GCRVIAEGRYNTPALAANAI-----EHGAW-----AVTVGS 211 (229)
T ss_dssp EEECTTTTSSSSCCCSSCCH-------HHHHHHHTT---TCCEEEESSCCSHHHHHHHH-----HTTCS-----EEEECH
T ss_pred EEEecCccCCCCCcCCCCCH-------HHHHHHHHc---CCCEEEECCCCCHHHHHHHH-----HcCCC-----EEEEch
Confidence 9985 3465332 2233 234444432 68888999999999999999 58985 566774
No 50
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=97.37 E-value=0.0013 Score=66.32 Aligned_cols=117 Identities=22% Similarity=0.336 Sum_probs=75.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-| +++.. .|+...+.+.++.+++.. .++||.-+. . +.++ ++.+.++|+|+|+
T Consensus 146 ~e~~~~lveaGvdvI--vldta---~G~~~~~~e~I~~ik~~~----~i~Vi~g~V-~-t~e~----A~~a~~aGAD~I~ 210 (400)
T 3ffs_A 146 IERAKLLVEAGVDVI--VLDSA---HGHSLNIIRTLKEIKSKM----NIDVIVGNV-V-TEEA----TKELIENGADGIK 210 (400)
T ss_dssp CHHHHHHHHHTCSEE--EECCS---CCSBHHHHHHHHHHHTTC----CCEEEEEEE-C-SHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEE--EEeCC---CCCcccHHHHHHHHHhcC----CCeEEEeec-C-CHHH----HHHHHHcCCCEEE
Confidence 567888999999975 44544 366677788888887654 256665221 2 5443 4667899999999
Q ss_pred cCCCCCCCCCC-------hhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKTNAT-------IPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~gat-------~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+.|-+..+.| .+. +..++.+.+... .++.|-++|||++..++.+++ .+|++
T Consensus 211 vG~g~Gs~~~tr~~~g~g~p~----~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kal-----alGAd 270 (400)
T 3ffs_A 211 VGIGPGSICTTRIVAGVGVPQ----ITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL-----AVGAS 270 (400)
T ss_dssp ECC---------CCSCBCCCH----HHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH-----TTTCS
T ss_pred EeCCCCcCcccccccccchhH----HHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHH-----HcCCC
Confidence 84332211111 111 234455554433 368999999999999999999 58985
No 51
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=97.31 E-value=0.0033 Score=62.95 Aligned_cols=118 Identities=25% Similarity=0.354 Sum_probs=76.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-|.+ |.+. |+.+.+.+.++.+++.+++ ++||+-. ..+.+ .++.+.++|+|||.
T Consensus 155 ~~~a~~~~~~G~d~i~i--~~~~---g~~~~~~e~i~~ir~~~~~---~pviv~~--v~~~~----~a~~a~~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVI--DSAH---GHSTRIIELIKKIKTKYPN---LDLIAGN--IVTKE----AALDLISVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEE--CCSC---CSSHHHHHHHHHHHHHCTT---CEEEEEE--ECSHH----HHHHHHTTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEE--eCCC---CChHHHHHHHHHHHHHCCC---CeEEEcC--CCcHH----HHHHHHhcCCCEEE
Confidence 44567788899998765 5432 6667788888999988753 4566632 22433 34567789999999
Q ss_pred cCCCCCC-------CCCChhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEK-------TNATIPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~-------~gat~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+.|-+. .+...+. .+.++.+++... .++.|=++|||+|.+++.+++ .+|++
T Consensus 221 vg~~~G~~~~~~~~~~~g~p~----~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~al-----a~GAd 280 (404)
T 1eep_A 221 VGIGPGSICTTRIVAGVGVPQ----ITAICDVYEACNNTNICIIADGGIRFSGDVVKAI-----AAGAD 280 (404)
T ss_dssp ECSSCSTTSHHHHHHCCCCCH----HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHH-----HHTCS
T ss_pred ECCCCCcCcCccccCCCCcch----HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHH-----HcCCC
Confidence 8422111 0111111 133444444443 478899999999999999999 48985
No 52
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.30 E-value=0.0021 Score=63.81 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
..++++.+++..+-+..+|.+ + +.++ ++.+.++|+|+|+-|...+.. ........+.++.+++.+++
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~-----~-~~e~----a~~a~~~Gad~I~vs~~ggr~---~~~~~~~~~~l~~v~~~~~~ 279 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGV-----I-TAED----ARLAVQHGAAGIIVSNHGARQ---LDYVPATIMALEEVVKAAQG 279 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECC-----C-SHHH----HHHHHHTTCSEEEECCGGGTS---STTCCCHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHhCCCEEEEec-----C-CHHH----HHHHHHcCCCEEEECCCCCcc---CCCcccHHHHHHHHHHHhCC
Confidence 346788888877544555654 3 4443 366889999999987632210 00001122456667777777
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++.|=++|||++.+++.+++ .+|++
T Consensus 280 ~ipvia~GGI~~~~D~~k~l-----~~GAd 304 (370)
T 1gox_A 280 RIPVFLDGGVRRGTDVFKAL-----ALGAA 304 (370)
T ss_dssp SSCEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred CCEEEEECCCCCHHHHHHHH-----HcCCC
Confidence 89999999999999999999 48985
No 53
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.28 E-value=0.0049 Score=62.94 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=59.5
Q ss_pred cceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCC-----------CCCC-hhhhHhHHHHHHHHHHHcCCCce
Q psy10250 268 IHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEK-----------TNAT-IPAGIIMCSAIKHFHKLSGKKIG 335 (387)
Q Consensus 268 ~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~-----------~gat-~~~~~~m~~~v~~~~~~~~~~~g 335 (387)
+.+|+ .+.+ +++++...++.+.++|+|+|--+.+... +|-+ +..-....+.|+.+++.+++++.
T Consensus 300 V~vKi---spd~-~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 300 VFVKL---APDL-NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp EEEEE---CSCC-CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred EEEEe---CCCC-CHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 34564 3346 5678889999999999998844332211 1111 11111223567788888888999
Q ss_pred EeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 336 LKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 336 IKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|=++|||+|.++|.+++ .+||+
T Consensus 376 VIg~GGI~s~~DA~e~l-----~aGAd 397 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKI-----EAGAS 397 (443)
T ss_dssp EEEESSCCSHHHHHHHH-----HTTEE
T ss_pred EEEECCCCCHHHHHHHH-----HcCCC
Confidence 99999999999999999 58984
No 54
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.27 E-value=0.033 Score=57.63 Aligned_cols=119 Identities=21% Similarity=0.312 Sum_probs=77.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-|.+-.. .|+...+.+-++.+++..++ +.+|.= ...+.+ .++.+.++|+|+|+
T Consensus 258 ~era~aLveaGvd~I~Id~a-----~g~~~~v~~~i~~i~~~~~~---~~vi~g--~v~t~e----~a~~~~~aGad~i~ 323 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTA-----HGHSQGVIDKVKEVRAKYPS---LNIIAG--NVATAE----ATKALIEAGANVVK 323 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECS-----CTTSHHHHHHHHHHHHHCTT---SEEEEE--EECSHH----HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhhccceEEeccc-----ccchhhhhhHHHHHHHhCCC---ceEEee--eeccHH----HHHHHHHhCCCEEE
Confidence 55677888999998766544 46788899999999987754 344432 222444 35678899999999
Q ss_pred cCCCCCCC-------CCChhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 302 TSTGKEKT-------NATIPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 302 TSTGf~~~-------gat~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
-+-|-+.. |...+.. ..+....+... -++.|=++|||++..++.+.+ .+||+.
T Consensus 324 vg~g~gsi~~~~~~~g~g~p~~----~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-----a~GA~~ 384 (511)
T 3usb_A 324 VGIGPGSICTTRVVAGVGVPQL----TAVYDCATEARKHGIPVIADGGIKYSGDMVKAL-----AAGAHV 384 (511)
T ss_dssp ECSSCSTTCCHHHHHCCCCCHH----HHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-----HTTCSE
T ss_pred ECCCCccccccccccCCCCCcH----HHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH-----HhCchh
Confidence 63221110 1112222 22333322222 258899999999999999999 589863
No 55
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.25 E-value=0.0023 Score=62.20 Aligned_cols=187 Identities=9% Similarity=0.021 Sum_probs=118.3
Q ss_pred CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC-----H
Q psy10250 144 TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL-----L 218 (387)
Q Consensus 144 T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~-----~ 218 (387)
...+++.++.++. +.++.+|-+.|-+...+...-... ..++.+ + +..|.+..- .
T Consensus 46 ~l~~~k~lv~~~~----------------~~~~~avl~~~g~~~~a~~~~~~~--~~~~gl--i-l~l~~~~~l~~~~~~ 104 (304)
T 1to3_A 46 VLTDFKVNAAKIL----------------SPYASAVLLDQQFCYRQAVEQNAV--AKSCAM--I-VAADDFIPGNGIPVD 104 (304)
T ss_dssp HHHHHHHHHHHHH----------------GGGCSEEEECTTTTHHHHHHTTCS--CTTSEE--E-EECEEEEEETTEEEE
T ss_pred hhhhHHHHHHHHH----------------hcCCCEEEeCHHHHHHHhhccccc--CCCCcE--E-EEECCCCCCCCCccc
Confidence 4588999999998 567899999999998755411100 122222 2 233321111 0
Q ss_pred HHH---HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec----cCC---Ch-HHHHH
Q psy10250 219 ETR---LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG----ELK---TS-ENIYC 287 (387)
Q Consensus 219 e~K---~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~----~L~---t~-e~i~~ 287 (387)
..- -.++++|++.|||-+=+-++++ +..+-..-+++++++.+.|+. .-+.+|+|.- .+. ++ +.+..
T Consensus 105 ~~l~~~~~~ve~a~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~ 181 (304)
T 1to3_A 105 NVVLDKKINAQAVKRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIID 181 (304)
T ss_dssp EEEECSSCCHHHHHHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHH
T ss_pred hhhccCchhHHHHHHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHH
Confidence 101 2678999999999999889888 333357788899999999976 3477888863 231 23 66888
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCce-EeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIG-LKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~g-IKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+++.+.+.|+||||+..+..+.| +++... +.++.....+ .+. |=++||| +.++.++.+..+. .+|++
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g-~~~~~~---~vv~~~~~~~--~~P~Vv~aGG~-~~~~~~~~~~~a~-~aGa~ 249 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKG-ARSDLL---TASQRLNGHI--NMPWVILSSGV-DEKLFPRAVRVAM-EAGAS 249 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCS-CHHHHH---HHHHHHHHTC--CSCEEECCTTS-CTTTHHHHHHHHH-HTTCC
T ss_pred HHHHHHHcCCCEEEeCCCcCCCC-CHHHHH---HHHHhccccC--CCCeEEEecCC-CHHHHHHHHHHHH-HcCCe
Confidence 89999999999999988522222 444222 1222211112 345 7779999 5666555555444 35773
No 56
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.23 E-value=0.0015 Score=66.14 Aligned_cols=105 Identities=18% Similarity=0.133 Sum_probs=71.6
Q ss_pred ChhHHHHHHHHHHHHh--------------------CCC-cceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC-CC
Q psy10250 249 QWPELFSEVKQMKEKC--------------------GEK-IHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST-GK 306 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~--------------------~~~-~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST-Gf 306 (387)
+.+.+.+=+++|+++. .-+ +.+|+- +.+ +++++...++.+.++|+|.|--+. ..
T Consensus 232 ~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~---pd~-~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 232 EAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA---PDL-NQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC---SCC-CHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec---CCC-CHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 4566666667777653 123 456763 466 567899999999999999886442 21
Q ss_pred C----------CCCCC-hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 307 E----------KTNAT-IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 307 ~----------~~gat-~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
. .+|-+ ...-..-++.|+.+++.+++++.|=++|||+|.++|.+++ .+||+
T Consensus 308 ~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l-----~aGAd 369 (415)
T 3i65_A 308 QINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI-----EAGAS 369 (415)
T ss_dssp CCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHH-----HHTEE
T ss_pred ccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 1 11111 1111122356777888888899999999999999999999 58985
No 57
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.17 E-value=0.0018 Score=58.30 Aligned_cols=111 Identities=21% Similarity=0.280 Sum_probs=71.5
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
.++.+.+.|||-|=+-. . .+ .+.+..+.+.++. .-+|+++|..-..+. ....+.+.+.|+|||.+.
T Consensus 69 ~~~~~~~~Gad~v~v~~-~----~~-----~~~~~~~~~~~~~-~g~~~~v~~~~~~t~---~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLG-V----TD-----VLTIQSCIRAAKE-AGKQVVVDMICVDDL---PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEET-T----SC-----HHHHHHHHHHHHH-HTCEEEEECTTCSSH---HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeC-C----CC-----hhHHHHHHHHHHH-cCCeEEEEecCCCCH---HHHHHHHHHcCCCEEEEc
Confidence 48899999998654421 1 11 2344555555543 237888874222232 233466788999999998
Q ss_pred CCCCCC--C-CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 304 TGKEKT--N-ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 304 TGf~~~--g-at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+||... + .++ +.++.+++.. +++.|-++|||+ .+++..++ .+|++
T Consensus 135 ~g~~g~~~~~~~~-------~~i~~l~~~~-~~~~i~~~gGI~-~~~~~~~~-----~~Gad 182 (211)
T 3f4w_A 135 TGTDQQAAGRKPI-------DDLITMLKVR-RKARIAVAGGIS-SQTVKDYA-----LLGPD 182 (211)
T ss_dssp CCHHHHHTTCCSH-------HHHHHHHHHC-SSCEEEEESSCC-TTTHHHHH-----TTCCS
T ss_pred CCCcccccCCCCH-------HHHHHHHHHc-CCCcEEEECCCC-HHHHHHHH-----HcCCC
Confidence 886421 1 122 4566666665 358899999997 99999999 58985
No 58
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.15 E-value=0.0039 Score=63.69 Aligned_cols=123 Identities=18% Similarity=0.213 Sum_probs=79.3
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..+++++++.|+|.|=+-.+ .|++..+.+.++.+++.+++ +.+| .+-..+.+ .+..+.++|+|+|+
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a-----~g~~~~~~~~i~~l~~~~p~---~pvi--~G~v~t~~----~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA-----HGHSAGVLRKIAEIRAHFPN---RTLI--AGNIATAE----GARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS-----CTTCHHHHHHHHHHHHHCSS---SCEE--EEEECSHH----HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCeEEEeee-----cCcchhHHHHHHHHHHHCCC---CcEe--CCCccCHH----HHHHHHHcCCCEEE
Confidence 46788999999998543332 36778888889999988743 2344 44454533 44567889999999
Q ss_pred cCCCCCCCCCChhhh---HhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 302 TSTGKEKTNATIPAG---IIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 302 TSTGf~~~gat~~~~---~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
.|.|.+....|.... .-..+.++.+....+ .++.|=++||||+..++.+.+ .+|++.
T Consensus 301 vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal-----~~GA~~ 361 (491)
T 1zfj_A 301 VGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKAL-----AAGGNA 361 (491)
T ss_dssp ECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH-----HTTCSE
T ss_pred ECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHH-----HcCCcc
Confidence 998765321110000 001123333333221 357888999999999999999 589863
No 59
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.10 E-value=0.0098 Score=61.28 Aligned_cols=118 Identities=20% Similarity=0.275 Sum_probs=75.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEE-eeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-AVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIl-Et~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
...++.+++.|+|-|.+ |.+ .|+.....+-++.+++.+++ +.||. +. . +.++ ++.+.++|+|+|
T Consensus 257 ~~~a~~~~~aG~d~v~i--~~~---~G~~~~~~~~i~~i~~~~~~---~pvi~~~v--~-t~~~----a~~l~~aGad~I 321 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVL--DSS---QGNSVYQIAMVHYIKQKYPH---LQVIGGNV--V-TAAQ----AKNLIDAGVDGL 321 (514)
T ss_dssp HHHHHHHHHTTCSEEEE--CCS---CCCSHHHHHHHHHHHHHCTT---CEEEEEEE--C-SHHH----HHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEe--ecc---CCcchhHHHHHHHHHHhCCC---CceEeccc--c-hHHH----HHHHHHcCCCEE
Confidence 45677889999997665 332 26666777889999988843 34443 23 2 4443 566789999999
Q ss_pred EcCCCCCCCCC-------ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 301 KTSTGKEKTNA-------TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 301 KTSTGf~~~ga-------t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.+.|.+.... ..+... -+..++.+++.. .+.|=++|||++..++.+++ .+|++
T Consensus 322 ~vg~~~G~~~~t~~~~~~g~~~~~-~~~~~~~~~~~~--~ipVia~GGI~~~~di~kal-----a~GAd 382 (514)
T 1jcn_A 322 RVGMGCGSICITQEVMACGRPQGT-AVYKVAEYARRF--GVPIIADGGIQTVGHVVKAL-----ALGAS 382 (514)
T ss_dssp EECSSCSCCBTTBCCCSCCCCHHH-HHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred EECCCCCcccccccccCCCccchh-HHHHHHHHHhhC--CCCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 99654332111 101111 113344444332 57888999999999999999 58985
No 60
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.10 E-value=0.0085 Score=58.63 Aligned_cols=120 Identities=11% Similarity=0.189 Sum_probs=73.4
Q ss_pred HCCCCeeeeecCchh-hh--cCC--hhHHHHHHHHHHHHhCCCcceEEEEeecc-CCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 230 KQKVDEVDIVIQRSL-VL--NNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGE-LKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 230 ~~GAdEID~Vin~~~-lk--~g~--~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~-L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
..|+|-|++=++... +. .|+ ++.+.+.++++++..+-+..+|.+ ++ + +.++ ++.+.++|+|+|-.|
T Consensus 138 ~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~---~~~~-~~~~----a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 138 MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEV---GFGM-SKAS----AGKLYEAGAAAVDIG 209 (349)
T ss_dssp HTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEE---SSCC-CHHH----HHHHHHHTCSEEEEE
T ss_pred hcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEec---CCCC-CHHH----HHHHHHcCCCEEEEc
Confidence 458887766554211 11 122 223677788888877545677764 33 4 4443 466788999999886
Q ss_pred -CCCC------------------CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 304 -TGKE------------------KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 304 -TGf~------------------~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
+|.. ..|.+. .+.++.+++.. .++.|=++|||+|.+|+.+++ .+|++
T Consensus 210 ~~ggt~~~~~e~~r~~~~~~~~~~~g~~~------~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l-----~~GAd-- 275 (349)
T 1p0k_A 210 GYGGTNFSKIENLRRQRQISFFNSWGIST------AASLAEIRSEF-PASTMIASGGLQDALDVAKAI-----ALGAS-- 275 (349)
T ss_dssp C---------------CCGGGGTTCSCCH------HHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHH-----HTTCS--
T ss_pred CCCCcchhhHHHhhcccchhhhhccCccH------HHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHH-----HcCCC--
Confidence 4421 111111 13455566655 578899999999999999999 48985
Q ss_pred CCCcceeecc
Q psy10250 365 NKDLFRIGAS 374 (387)
Q Consensus 365 ~~~~~RIGtS 374 (387)
..-||+.
T Consensus 276 ---~V~iG~~ 282 (349)
T 1p0k_A 276 ---CTGMAGH 282 (349)
T ss_dssp ---EEEECHH
T ss_pred ---EEEEcHH
Confidence 3445654
No 61
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.06 E-value=0.0019 Score=64.12 Aligned_cols=87 Identities=24% Similarity=0.275 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC----CCCCChhhhHhHHHHHHHHHHH
Q psy10250 254 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE----KTNATIPAGIIMCSAIKHFHKL 329 (387)
Q Consensus 254 ~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~----~~gat~~~~~~m~~~v~~~~~~ 329 (387)
.++++.+++..+.+..+|-+ + +.++ ++.+.++|+|+|-.|..-+ ...++. +.+..+++.
T Consensus 206 w~~i~~lr~~~~~PvivK~v-----~-~~e~----A~~a~~~GaD~I~vsn~GG~~~d~~~~~~-------~~L~~i~~a 268 (352)
T 3sgz_A 206 WNDLSLLQSITRLPIILKGI-----L-TKED----AELAMKHNVQGIVVSNHGGRQLDEVSASI-------DALREVVAA 268 (352)
T ss_dssp HHHHHHHHHHCCSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEECCGGGTSSCSSCCHH-------HHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEec-----C-cHHH----HHHHHHcCCCEEEEeCCCCCccCCCccHH-------HHHHHHHHH
Confidence 35688888887656788977 3 4443 5778899999998654211 111222 345555666
Q ss_pred cCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 330 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 330 ~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+++++.|=++||||+..|+.+.+ .+||+
T Consensus 269 v~~~ipVia~GGI~~g~Dv~kaL-----alGA~ 296 (352)
T 3sgz_A 269 VKGKIEVYMDGGVRTGTDVLKAL-----ALGAR 296 (352)
T ss_dssp HTTSSEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred hCCCCeEEEECCCCCHHHHHHHH-----HcCCC
Confidence 77889999999999999999999 58995
No 62
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.06 E-value=0.0084 Score=61.76 Aligned_cols=118 Identities=21% Similarity=0.260 Sum_probs=77.9
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-|.+ |.+ .|+...+.+.++.+++..++ +.||.-+ ..+.++ ++.+.++|+|||+
T Consensus 231 ~~~a~~l~~aG~d~I~i--d~a---~g~~~~~~~~v~~i~~~~p~---~~Vi~g~--v~t~e~----a~~l~~aGaD~I~ 296 (490)
T 4avf_A 231 GERVAALVAAGVDVVVV--DTA---HGHSKGVIERVRWVKQTFPD---VQVIGGN--IATAEA----AKALAEAGADAVK 296 (490)
T ss_dssp HHHHHHHHHTTCSEEEE--ECS---CCSBHHHHHHHHHHHHHCTT---SEEEEEE--ECSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHhhcccceEEe--ccc---CCcchhHHHHHHHHHHHCCC---ceEEEee--eCcHHH----HHHHHHcCCCEEE
Confidence 45577788889997544 433 46778888999999988754 3455522 225443 4678999999999
Q ss_pred cCCCCCCC-------CCChhhhHhHHHHHHHHHHHc-CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKT-------NATIPAGIIMCSAIKHFHKLS-GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~-------gat~~~~~~m~~~v~~~~~~~-~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+-|-+.. |...+.. ..+....+.. ...+.|=++|||++.+++.+++ .+|++
T Consensus 297 vg~g~Gs~~~t~~~~g~g~p~~----~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-----~~GAd 356 (490)
T 4avf_A 297 VGIGPGSICTTRIVAGVGVPQI----SAIANVAAALEGTGVPLIADGGIRFSGDLAKAM-----VAGAY 356 (490)
T ss_dssp ECSSCSTTCHHHHHTCBCCCHH----HHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH-----HHTCS
T ss_pred ECCCCCcCCCccccCCCCccHH----HHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 74322111 1112221 3444444444 2368899999999999999999 48985
No 63
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.03 E-value=0.0096 Score=58.57 Aligned_cols=126 Identities=10% Similarity=0.110 Sum_probs=79.9
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh----c-------CC--------hhHHHHHHHHHHHHhCCCcceEEEEeec-----c
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL----N-------NQ--------WPELFSEVKQMKEKCGEKIHMKTILAVG-----E 278 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk----~-------g~--------~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-----~ 278 (387)
..|+.|.+.|.|-|++=.-=|+|. | .. ...+.+=+++|++++++..++-|=|-.. -
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 446788899999999764333222 1 11 2345667788888887534443333321 2
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCC---hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNAT---IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat---~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
+ +.++....++...++|+|||--|.|......+ .+. ...+.++.+++.+ ++.|=+.|||+|.++|.+++.
T Consensus 236 ~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~--~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 236 W-SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPG--FQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQ 308 (349)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTT--TTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCcc--ccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHH
Confidence 3 45677788899999999999988652111100 010 0123455566655 467888999999999999994
No 64
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.01 E-value=0.0081 Score=59.84 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=74.5
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
..++.+++.|+|-| ++|.. .|+.+.+.+-|+.+++..++ ++||.=+. . |.++. +.+.++|+|||+.
T Consensus 111 ~~~~~lieaGvd~I--~idta---~G~~~~~~~~I~~ik~~~p~---v~Vi~G~v-~-t~e~A----~~a~~aGAD~I~v 176 (366)
T 4fo4_A 111 ERVKALVEAGVDVL--LIDSS---HGHSEGVLQRIRETRAAYPH---LEIIGGNV-A-TAEGA----RALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHTTCSEE--EEECS---CTTSHHHHHHHHHHHHHCTT---CEEEEEEE-C-SHHHH----HHHHHHTCSEEEE
T ss_pred HHHHHHHhCCCCEE--EEeCC---CCCCHHHHHHHHHHHHhcCC---CceEeeee-C-CHHHH----HHHHHcCCCEEEE
Confidence 45777888998864 34432 25567777888888887644 56666332 3 55543 5567899999998
Q ss_pred CCCCCCCCC--C-------hhhhHhHHHHHHHHHHHc-CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 STGKEKTNA--T-------IPAGIIMCSAIKHFHKLS-GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 STGf~~~ga--t-------~~~~~~m~~~v~~~~~~~-~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|+++++. | .+. ...++...+.. ...+.|=++|||++..++.+.+ .+|++
T Consensus 177 --G~gpGs~~~tr~~~g~g~p~----~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kal-----a~GAd 235 (366)
T 4fo4_A 177 --GIGPGSICTTRIVTGVGVPQ----ITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-----AAGAS 235 (366)
T ss_dssp --CSSCSTTBCHHHHHCCCCCH----HHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred --ecCCCCCCCcccccCcccch----HHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 4444321 1 122 12334333322 2357888999999999999999 58985
No 65
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.97 E-value=0.011 Score=65.89 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=83.9
Q ss_pred HHHHHHHHHCCCCeeeeecCc---------hhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 222 LHEIELLAKQKVDEVDIVIQR---------SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~---------~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
..-++.+.+.|+|.|++=++- |.-...+.+.+.+-++++++..+-+..+|+. ..+ +++...++.+
T Consensus 651 ~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~---~~~---~~~~~~a~~~ 724 (1025)
T 1gte_A 651 MELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT---PNV---TDIVSIARAA 724 (1025)
T ss_dssp HHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC---SCS---SCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC---CCh---HHHHHHHHHH
Confidence 334556667899999985431 2222246788888899999887545677763 334 2366677888
Q ss_pred HHcCCCEEEcCC---------------------CCC-CCCCChhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHH
Q psy10250 293 MFAGSDFIKTST---------------------GKE-KTNATIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSV 349 (387)
Q Consensus 293 ~~aGaDfVKTST---------------------Gf~-~~gat~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~ 349 (387)
.++|+|+|-.+. |.. .+|.+-+.. -+-.+.|+.+++.+ +++.|=++|||+|.++|.
T Consensus 725 ~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~ 803 (1025)
T 1gte_A 725 KEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGL 803 (1025)
T ss_dssp HHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHH
T ss_pred HHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHH
Confidence 999999998741 110 011111111 11124566667766 458999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy10250 350 RWIYLVLIMLGPD 362 (387)
Q Consensus 350 ~~i~l~~~~~Ga~ 362 (387)
+++ .+|++
T Consensus 804 ~~l-----~~Ga~ 811 (1025)
T 1gte_A 804 QFL-----HSGAS 811 (1025)
T ss_dssp HHH-----HTTCS
T ss_pred HHH-----HcCCC
Confidence 999 48984
No 66
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.96 E-value=0.012 Score=57.62 Aligned_cols=121 Identities=20% Similarity=0.180 Sum_probs=77.2
Q ss_pred HHHHHHHHCC--CCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 223 HEIELLAKQK--VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 223 ~Ea~~Ai~~G--AdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
..++.+++.| ++-|++ |.+ .|+.....+.|+.+++.++.+.++| -..+ +.+ .++.+.++|+|+|
T Consensus 109 ~~a~~~~~~g~~~~~i~i--~~~---~G~~~~~~~~i~~lr~~~~~~~vi~----G~v~-s~e----~A~~a~~aGad~I 174 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITI--DIA---HGHSNAVINMIQHIKKHLPESFVIA----GNVG-TPE----AVRELENAGADAT 174 (336)
T ss_dssp HHHHHHHHTTCCCSEEEE--ECS---SCCSHHHHHHHHHHHHHCTTSEEEE----EEEC-SHH----HHHHHHHHTCSEE
T ss_pred HHHHHHHhcCCCCCEEEE--ECC---CCCcHHHHHHHHHHHHhCCCCEEEE----CCcC-CHH----HHHHHHHcCCCEE
Confidence 4577888888 776653 443 3778888899999999875422222 2234 543 3467889999999
Q ss_pred EcCCCCCCCCCChhhh-----HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 301 KTSTGKEKTNATIPAG-----IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 301 KTSTGf~~~gat~~~~-----~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
..|++-+..-.+.... -...+.+..+++.+ ++.|=++|||++..++.+++ .+|++.+
T Consensus 175 vvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kal-----alGAdaV 236 (336)
T 1ypf_A 175 KVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSI-----RFGATMV 236 (336)
T ss_dssp EECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHH-----HTTCSEE
T ss_pred EEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHH-----HcCCCEE
Confidence 9876421100000000 00123455555544 68899999999999999999 5898643
No 67
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.91 E-value=0.014 Score=57.07 Aligned_cols=131 Identities=11% Similarity=0.105 Sum_probs=82.3
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhh-----------cC--------ChhHHHHHHHHHHHHhCCCcceEEEEee---cc
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVL-----------NN--------QWPELFSEVKQMKEKCGEKIHMKTILAV---GE 278 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk-----------~g--------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt---~~ 278 (387)
=+..|+.|.+.|.|-||+=..-|+|. .. +...+.+=+++|++++.-++.+|+=... +-
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTS
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCC
Confidence 35567888999999999754322221 11 2244566677788877323445543321 12
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCC--CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTN--ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~g--at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
+ +.++....++.+.++|+|||--|.|..... ...+. ...+.++.+++.+ ++.|=+.|||+|.++|.+++
T Consensus 226 ~-~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~--~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l---- 296 (338)
T 1z41_A 226 L-DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPG--YQVSFAEKIREQA--DMATGAVGMITDGSMAEEIL---- 296 (338)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT--TTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHH----
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCcc--chHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHH----
Confidence 3 456777888999999999999877642100 01110 0123455666665 46788899999999999999
Q ss_pred HhcC-C
Q psy10250 357 IMLG-P 361 (387)
Q Consensus 357 ~~~G-a 361 (387)
+.| +
T Consensus 297 -~~G~a 301 (338)
T 1z41_A 297 -QNGRA 301 (338)
T ss_dssp -HTTSC
T ss_pred -HcCCc
Confidence 477 5
No 68
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.90 E-value=0.011 Score=61.12 Aligned_cols=118 Identities=20% Similarity=0.286 Sum_probs=77.2
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|+|-| ++|.. .|+...+.+-++++++..++ +.||. +-..+.+ .++.+.++|+|+|+
T Consensus 233 ~~~a~~l~~aG~d~I--~id~a---~g~~~~~~~~i~~ir~~~p~---~~Vi~--g~v~t~e----~a~~l~~aGaD~I~ 298 (496)
T 4fxs_A 233 EERVKALVEAGVDVL--LIDSS---HGHSEGVLQRIRETRAAYPH---LEIIG--GNVATAE----GARALIEAGVSAVK 298 (496)
T ss_dssp HHHHHHHHHTTCSEE--EEECS---CTTSHHHHHHHHHHHHHCTT---CCEEE--EEECSHH----HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhccCceE--Eeccc---cccchHHHHHHHHHHHHCCC---ceEEE--cccCcHH----HHHHHHHhCCCEEE
Confidence 445777888899975 44544 36778888999999988754 33444 2222544 34667899999999
Q ss_pred cCCCCCCCCCC-------hhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKTNAT-------IPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~gat-------~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
-+-|-+....| .+.. ..+....+... ..+.|=++|||++..++.+.+ .+|++
T Consensus 299 Vg~g~Gs~~~tr~~~g~g~p~~----~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal-----a~GAd 358 (496)
T 4fxs_A 299 VGIGPGSICTTRIVTGVGVPQI----TAIADAAGVANEYGIPVIADGGIRFSGDISKAI-----AAGAS 358 (496)
T ss_dssp ECSSCCTTBCHHHHHCCCCCHH----HHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred ECCCCCcCcccccccCCCccHH----HHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 76543332111 1221 23344443332 257888999999999999999 48985
No 69
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.88 E-value=0.0051 Score=60.94 Aligned_cols=126 Identities=14% Similarity=0.140 Sum_probs=78.5
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh-----------cCCh--------hHHHHHHHHHHHHhCCCcceEEEEeecc-----
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL-----------NNQW--------PELFSEVKQMKEKCGEKIHMKTILAVGE----- 278 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk-----------~g~~--------~~v~~Ei~~v~~~~~~~~~lKvIlEt~~----- 278 (387)
..|+.|.+.|.|-|++=.--|+|. ...| ..+.+=+++|++++++..++-|=|-...
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 346778889999999864322221 1122 3455667788888874333433332221
Q ss_pred -CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCC---hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 279 -LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNAT---IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 279 -L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat---~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
+ +.++....++...++|+|||-.|.|....... .+. ...+.++.+++.+ ++.|=+.|||+|.++|.+++.
T Consensus 242 ~~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~--~~~~~~~~ir~~~--~iPVi~~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 242 EQ-TLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPA--FMGPIAERVRREA--KLPVTSAWGFGTPQLAEAALQ 315 (363)
T ss_dssp HH-HHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTT--TTHHHHHHHHHHH--TCCEEECSSTTSHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcc--hhHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHH
Confidence 3 35667778888999999999988763211100 010 0123455566665 466889999999999999994
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=96.80 E-value=0.014 Score=57.74 Aligned_cols=118 Identities=17% Similarity=0.212 Sum_probs=72.3
Q ss_pred HHHHHHHHC--CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 223 HEIELLAKQ--KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 223 ~Ea~~Ai~~--GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
..++..++. |++-|-+-.+. |+...+.+.|+.+++..++ +.||+=+ -+ +.++ ++.+.++|+|||
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~-----g~~~~~~~~i~~lr~~~~~---~~vi~g~-v~-t~e~----A~~a~~aGaD~I 186 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVAN-----GYSEHFVEFVKDVRKRFPQ---HTIMAGN-VV-TGEM----VEELILSGADII 186 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSC-----TTBHHHHHHHHHHHHHCTT---SEEEEEE-EC-SHHH----HHHHHHTTCSEE
T ss_pred HHHHHHHhccCCCCEEEEEecC-----CCcHHHHHHHHHHHHhcCC---CeEEEEe-CC-CHHH----HHHHHHhCCCEE
Confidence 455666665 88854432232 5667788889999987743 4455422 23 5443 466889999999
Q ss_pred EcCCCCCCC-------CCChhhhHhHHHHHHHHHHHcC-CCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 301 KTSTGKEKT-------NATIPAGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 301 KTSTGf~~~-------gat~~~~~~m~~~v~~~~~~~~-~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
+.|-|-+.. +...+... .+..+.+..+ .++.|=++|||+|..++.+.+ .+||+.
T Consensus 187 ~v~~g~G~~~~~r~~~g~~~p~~~----~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAl-----alGA~~ 248 (351)
T 2c6q_A 187 KVGIGPGSVCTTRKKTGVGYPQLS----AVMECADAAHGLKGHIISDGGCSCPGDVAKAF-----GAGADF 248 (351)
T ss_dssp EECSSCSTTBCHHHHHCBCCCHHH----HHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH-----HTTCSE
T ss_pred EECCCCCcCcCccccCCCCccHHH----HHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHH-----HcCCCc
Confidence 987542210 00111111 2222222222 358899999999999999999 599963
No 71
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.79 E-value=0.01 Score=56.78 Aligned_cols=116 Identities=14% Similarity=0.182 Sum_probs=73.7
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
++++|.+.|||-|=+... .+ + .++++.+.+.++. .-+.+++|+. |.+++.+| .+.|+|||.+.
T Consensus 127 qv~~A~~~GAD~VlLi~a--~l-~------~~~l~~l~~~a~~-lGl~~lvev~---t~ee~~~A----~~~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVA--AL-E------QSVLVSMLDRTES-LGMTALVEVH---TEQEADRA----LKAGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGG--GS-C------HHHHHHHHHHHHH-TTCEEEEEES---SHHHHHHH----HHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecc--cC-C------HHHHHHHHHHHHH-CCCcEEEEcC---CHHHHHHH----HHCCCCEEEEC
Confidence 567777899988654222 11 1 2345555555543 3467889885 55666554 36799999875
Q ss_pred CCCCC--CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 304 TGKEK--TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 304 TGf~~--~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
+... .+..++ .++.+.+.++..+.+=+.|||+|.+++..+. .+|++ .+-+|++
T Consensus 190 -~r~l~~~~~dl~-------~~~~l~~~v~~~~pvVaegGI~t~edv~~l~-----~~Gad-----gvlVGsa 244 (272)
T 3qja_A 190 -ARDLMTLDVDRD-------CFARIAPGLPSSVIRIAESGVRGTADLLAYA-----GAGAD-----AVLVGEG 244 (272)
T ss_dssp -SBCTTTCCBCTT-------HHHHHGGGSCTTSEEEEESCCCSHHHHHHHH-----HTTCS-----EEEECHH
T ss_pred -CCcccccccCHH-------HHHHHHHhCcccCEEEEECCCCCHHHHHHHH-----HcCCC-----EEEEcHH
Confidence 2211 122232 3444455556567788899999999999999 58984 5666753
No 72
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.76 E-value=0.015 Score=52.14 Aligned_cols=149 Identities=12% Similarity=0.199 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE--CCcc----HHHHHHHhhhcCCCCCceEEEEecCCCCCCC
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV--YPAR----VVDVIKVLDRENARDDVKVASVAAGFPSGQY 216 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV--~P~~----v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~ 216 (387)
.+.++..++++.+. ++|+..+.+ ...+ ++.+++.+. .+..+.. |. ..
T Consensus 19 ~~~~~~~~~~~~~~----------------~~G~~~iev~~~~~~~~~~i~~ir~~~~-----~~~~ig~---~~---v~ 71 (205)
T 1wa3_A 19 NSVEEAKEKALAVF----------------EGGVHLIEITFTVPDADTVIKELSFLKE-----KGAIIGA---GT---VT 71 (205)
T ss_dssp SSHHHHHHHHHHHH----------------HTTCCEEEEETTSTTHHHHHHHTHHHHH-----TTCEEEE---ES---CC
T ss_pred CCHHHHHHHHHHHH----------------HCCCCEEEEeCCChhHHHHHHHHHHHCC-----CCcEEEe---cc---cC
Confidence 36777888887777 566777766 3223 333333332 1333322 11 01
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 296 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG 296 (387)
+ ..+++.|++.|||-| +..++. .++ .+.++. .-+.+|.+. . |.+++. .+.+.|
T Consensus 72 ~----~~~~~~a~~~Gad~i-v~~~~~-----------~~~---~~~~~~-~g~~vi~g~--~-t~~e~~----~a~~~G 124 (205)
T 1wa3_A 72 S----VEQCRKAVESGAEFI-VSPHLD-----------EEI---SQFCKE-KGVFYMPGV--M-TPTELV----KAMKLG 124 (205)
T ss_dssp S----HHHHHHHHHHTCSEE-ECSSCC-----------HHH---HHHHHH-HTCEEECEE--C-SHHHHH----HHHHTT
T ss_pred C----HHHHHHHHHcCCCEE-EcCCCC-----------HHH---HHHHHH-cCCcEECCc--C-CHHHHH----HHHHcC
Confidence 2 247899999999988 444432 122 223322 235666643 3 566654 457899
Q ss_pred CCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 297 SDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 297 aDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+|+||...+ .+. -.+.++.+++..+ ++.|=++|||. .+++..++ .+|++
T Consensus 125 ad~vk~~~~------~~~----g~~~~~~l~~~~~-~~pvia~GGI~-~~~~~~~~-----~~Ga~ 173 (205)
T 1wa3_A 125 HTILKLFPG------EVV----GPQFVKAMKGPFP-NVKFVPTGGVN-LDNVCEWF-----KAGVL 173 (205)
T ss_dssp CCEEEETTH------HHH----HHHHHHHHHTTCT-TCEEEEBSSCC-TTTHHHHH-----HHTCS
T ss_pred CCEEEEcCc------ccc----CHHHHHHHHHhCC-CCcEEEcCCCC-HHHHHHHH-----HCCCC
Confidence 999996431 110 0134455544443 68899999996 78999999 58985
No 73
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.73 E-value=0.0051 Score=61.29 Aligned_cols=119 Identities=16% Similarity=0.112 Sum_probs=69.3
Q ss_pred HCCCCeeeeecCchhhh-cCChh---HHHHHHHHHHHHhCCCcceEEEEeecc-CCChHHHHHHHHHHHHcCCCEEEcCC
Q psy10250 230 KQKVDEVDIVIQRSLVL-NNQWP---ELFSEVKQMKEKCGEKIHMKTILAVGE-LKTSENIYCASMTAMFAGSDFIKTST 304 (387)
Q Consensus 230 ~~GAdEID~Vin~~~lk-~g~~~---~v~~Ei~~v~~~~~~~~~lKvIlEt~~-L~t~e~i~~a~~ia~~aGaDfVKTST 304 (387)
+.||.+|+++.--..+. .|+.+ .+.+.|+.+++..+-++.+|. ++- + +.+ .++.+.++|+|+|.-+-
T Consensus 148 ~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~---vG~g~-s~~----~A~~l~~aGad~I~V~g 219 (368)
T 3vkj_A 148 EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE---SGNGI-SME----TAKLLYSYGIKNFDTSG 219 (368)
T ss_dssp TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC---SSSCC-CHH----HHHHHHHTTCCEEECCC
T ss_pred cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe---CCCCC-CHH----HHHHHHhCCCCEEEEeC
Confidence 55666666442122222 34432 478888998887654455553 321 3 443 35678899999998754
Q ss_pred CCCCCCCChhhhHh--------------------HHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 305 GKEKTNATIPAGII--------------------MCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 305 Gf~~~gat~~~~~~--------------------m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.+...+.+|..+. ....+...++..+ ++.|=++|||||..++.+.+ .+||+
T Consensus 220 ~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal-----~lGA~ 291 (368)
T 3vkj_A 220 QGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAI-----ALGAD 291 (368)
T ss_dssp BTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred CCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHH-----HcCCC
Confidence 31110000000000 0124445555554 68899999999999999999 48996
No 74
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.68 E-value=0.034 Score=54.52 Aligned_cols=126 Identities=11% Similarity=0.119 Sum_probs=78.5
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh----c-------C--------ChhHHHHHHHHHHHHhCCCcceEEEEee---ccCC
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL----N-------N--------QWPELFSEVKQMKEKCGEKIHMKTILAV---GELK 280 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk----~-------g--------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt---~~L~ 280 (387)
.-|+.|.+.|.|-||+=.-=|+|. + . +...+.+=+++|++++.-++.+|+=... +-+
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~- 226 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGL- 226 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSC-
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC-
Confidence 446778889999999753321111 1 1 2234566677888888323445544321 013
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCC--CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTN--ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~g--at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
+.++....++...++|+|||-.|.|..... ...+. ...+-++.+++.+ ++.|=+.|||+|.++|.+++.
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~ 297 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPG--YQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQ 297 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT--TTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcc--ccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHH
Confidence 356677888999999999999987642110 00111 0123456666665 467888999999999999994
No 75
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=96.58 E-value=0.0061 Score=59.37 Aligned_cols=113 Identities=17% Similarity=0.241 Sum_probs=69.3
Q ss_pred CCCeeeeecCch--hhhcCC--hhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC
Q psy10250 232 KVDEVDIVIQRS--LVLNNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE 307 (387)
Q Consensus 232 GAdEID~Vin~~--~lk~g~--~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~ 307 (387)
|++-+.+=+|.. .+..++ |..+.+.++++++ .+-+..+|.| ..+ + +.++ ++.+.++|+|+|.-|.+.+
T Consensus 145 ~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v-~~g-~-~~e~----a~~~~~~G~d~I~vs~~gg 216 (332)
T 1vcf_A 145 EADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-LPFPVMVKEV-GHG-L-SREA----ALALRDLPLAAVDVAGAGG 216 (332)
T ss_dssp TCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-CSSCEEEECS-SSC-C-CHHH----HHHHTTSCCSEEECCCBTS
T ss_pred CCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-CCCCEEEEec-CCC-C-CHHH----HHHHHHcCCCEEEeCCCCC
Confidence 565433334532 122343 3346778888888 6544666642 222 4 4443 4678899999998865322
Q ss_pred C--------C-----------CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 308 K--------T-----------NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 308 ~--------~-----------gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
. . ...++ ..+.+..+++.++ ++.|=++|||+|.+++.+++ .+||+
T Consensus 217 t~~~~~~~~r~~~~~~~~~~~~~g~~----~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal-----~~GAd 280 (332)
T 1vcf_A 217 TSWARVEEWVRFGEVRHPELCEIGIP----TARAILEVREVLP-HLPLVASGGVYTGTDGAKAL-----ALGAD 280 (332)
T ss_dssp CCHHHHHHTC--------CCTTCSCB----HHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred CcchhHHHhhccccchhhhHhhcccc----HHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHH-----HhCCC
Confidence 1 0 00111 1245566666664 68999999999999999999 47985
No 76
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=96.58 E-value=0.017 Score=59.91 Aligned_cols=91 Identities=15% Similarity=0.212 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHc---
Q psy10250 254 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLS--- 330 (387)
Q Consensus 254 ~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~--- 330 (387)
.++|+.+++..+-++.+|-+ . +.+. ++.+.++|+|+|-.|..-+. .++....-.+.+..+++.+
T Consensus 332 ~~~i~~lr~~~~~PvivKgv-----~-~~e~----A~~a~~aGad~I~vs~hgG~---~~d~~~~~~~~l~~v~~~v~~~ 398 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGV-----Q-RTED----VIKAAEIGVSGVVLSNHGGR---QLDFSRAPIEVLAETMPILEQR 398 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEECCTTTT---SSTTCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCcEEEEeC-----C-CHHH----HHHHHHcCCCEEEEcCCCCc---cCCCCCchHHHHHHHHHHHHhh
Confidence 46788999887655778843 2 3332 56788999999988653211 1111111123344444444
Q ss_pred --CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 331 --GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 331 --~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++++.|=++||||+..++.+++ .+||+
T Consensus 399 ~~~~~ipVia~GGI~~g~Dv~kaL-----alGAd 427 (511)
T 1kbi_A 399 NLKDKLEVFVDGGVRRGTDVLKAL-----CLGAK 427 (511)
T ss_dssp TCBTTBEEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred ccCCCcEEEEECCCCCHHHHHHHH-----HcCCC
Confidence 4579999999999999999999 48985
No 77
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.56 E-value=0.0015 Score=63.33 Aligned_cols=76 Identities=18% Similarity=0.094 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHcCCC-----eeeeecchhHHhcCChhH---HHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHH
Q psy10250 7 YLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYY 78 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~-----EiD~Vin~~~lk~g~~~~---v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~ 78 (387)
.+...|..|.+.+...|++ +.|+|+ +|++++.. +.+.++++++.++. .+|+++|+..+ +|+..
T Consensus 144 t~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~nh~~~~g~i~~ai~~~r~~~~~--~~~i~vev~tl---ee~~~ 214 (294)
T 3c2e_A 144 TTPGLRRLEKYSMLVGGCDTHRYDLSSMVM----LKDNHIWATGSITNAVKNARAVCGF--AVKIEVECLSE---DEATE 214 (294)
T ss_dssp CCTTCHHHHHHHHHHTTCBCCCCSTTTSEE----ECHHHHHHHSSHHHHHHHHHHHHCT--TSCEEEECSSS---HHHHH
T ss_pred CChhHHHHHHHHHHhCCCCceecCccceEE----eecchhhhcCCHHHHHHHHHHhcCc--CCeEEEecCCH---HHHHH
Confidence 3467899999999999999 999999 77777776 78888888887763 47999999866 66776
Q ss_pred HHHHHHHcCCCEEecCC
Q psy10250 79 ASMTAMFAGSDFIKTST 95 (387)
Q Consensus 79 a~~~a~~ag~dfvKTST 95 (387)
++ ++|+|||+.+|
T Consensus 215 A~----~aGaD~I~ld~ 227 (294)
T 3c2e_A 215 AI----EAGADVIMLDN 227 (294)
T ss_dssp HH----HHTCSEEECCC
T ss_pred HH----HcCCCEEEECC
Confidence 65 47999999988
No 78
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.54 E-value=0.0016 Score=63.22 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCC-----eeeeecchhHHhcCChhH---HHHHHHHHHHHcccCccEEEEEeccCCCCHHH
Q psy10250 4 SGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEKCEEKIHMKTILAVGELKTSEN 75 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~-----EiD~Vin~~~lk~g~~~~---v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~ 75 (387)
.+..+...|..|.+.+...|++ +.|+|+ +|++++.. +.+.++++++.+++ . |+++|+..| ++
T Consensus 151 tRkt~P~~r~~e~~Av~~GG~~~hr~~l~d~vl----ikdnhi~~~Gti~~ai~~~r~~~~~--~-kI~vev~tl---ee 220 (296)
T 1qap_A 151 TRKTLPGLRTALKYAVLCGGGANHRLGLTDAFL----IKENHIIASGSVRQAVEKAFWLHPD--V-PVEVEVENL---DE 220 (296)
T ss_dssp CSCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEE----ECHHHHHHHSSHHHHHHHHHHHSTT--S-CEEEEESSH---HH
T ss_pred eCCCCcccHHHHHHHHHHCCchhhccccccEEE----EEcCCeeccCCHHHHHHHHHHhCCC--C-cEEEEeCCH---HH
Confidence 3456678899999999999999 999998 55555555 78889999888764 4 999999765 66
Q ss_pred HHHHHHHHHHcCCCEEecCC
Q psy10250 76 IYYASMTAMFAGSDFIKTST 95 (387)
Q Consensus 76 i~~a~~~a~~ag~dfvKTST 95 (387)
+..+ .++|+|||++++
T Consensus 221 ~~eA----~~aGaD~I~ld~ 236 (296)
T 1qap_A 221 LDDA----LKAGADIIMLDN 236 (296)
T ss_dssp HHHH----HHTTCSEEEESS
T ss_pred HHHH----HHcCCCEEEECC
Confidence 6655 478999999987
No 79
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=96.53 E-value=0.1 Score=49.81 Aligned_cols=193 Identities=15% Similarity=0.092 Sum_probs=119.4
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE----CCccHH---HHHHHhhhcCCCCCceEEEEecCCC
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV----YPARVV---DVIKVLDRENARDDVKVASVAAGFP 212 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV----~P~~v~---~a~~~L~~~~~~~~v~v~tVvigFP 212 (387)
....+.++..++++... +.|+..+-+ .|.|+| ...+.++......+++++.. + |
T Consensus 20 ~~~~~~e~k~~i~~~L~----------------~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l-~--~ 80 (295)
T 1ydn_A 20 KRFVPTADKIALINRLS----------------DCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVL-V--P 80 (295)
T ss_dssp SSCCCHHHHHHHHHHHT----------------TTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEE-C--S
T ss_pred CCCcCHHHHHHHHHHHH----------------HcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEE-e--C
Confidence 44578899999999887 556655555 355554 22333322111247888766 3 3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCchh--h---hcCChhHHHHHHHHHHHHhCCCcceEEEEeecc--------C
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSL--V---LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--------L 279 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~--l---k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~--------L 279 (387)
. ...++.|++.|++.|-+.+..+. . ....++...+.++++++.++. .-++|-.+.+. -
T Consensus 81 n--------~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~ 151 (295)
T 1ydn_A 81 N--------MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGP 151 (295)
T ss_dssp S--------HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECSSEETTTEE
T ss_pred C--------HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCC
Confidence 2 46788999999999987753331 1 123567777888887877764 23455433322 3
Q ss_pred CChHHHHHHHHHHHHcCCCE--EEcCCCCCCCCCChhhhHhHHHHHHHHHHHcC-CCceEeE--eccCCCHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGSDF--IKTSTGKEKTNATIPAGIIMCSAIKHFHKLSG-KKIGLKP--AGGISTFEDSVRWIYL 354 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDf--VKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~-~~~gIKa--sGGIrt~~~a~~~i~l 354 (387)
.+++...+.++.+.+.|+|. +.++.|. .+|..+..+++. +++.++ -.+++.. --|.-.. .++.-+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~----~~P~~~~~lv~~---l~~~~~~~~l~~H~Hn~~Gla~a-n~l~Ai-- 221 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGR----GTPDTVAAMLDA---VLAIAPAHSLAGHYHDTGGRALD-NIRVSL-- 221 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSC----CCHHHHHHHHHH---HHTTSCGGGEEEEEBCTTSCHHH-HHHHHH--
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCC----cCHHHHHHHHHH---HHHhCCCCeEEEEECCCcchHHH-HHHHHH--
Confidence 46788889999999999996 4666775 578766655444 444555 3566666 3344333 344444
Q ss_pred HHHhcCCCccCCCcceeec
Q psy10250 355 VLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 355 ~~~~~Ga~w~~~~~~RIGt 373 (387)
++|+++++....=+|-
T Consensus 222 ---~aG~~~vd~sv~GlG~ 237 (295)
T 1ydn_A 222 ---EKGLRVFDASVGGLGG 237 (295)
T ss_dssp ---HHTCCEEEEBTTCCSC
T ss_pred ---HhCCCEEEeccccCCC
Confidence 5899877665544543
No 80
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=96.42 E-value=0.048 Score=53.02 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=113.5
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecC------CCCCCC
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAG------FPSGQY 216 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvig------FP~G~~ 216 (387)
.-.+.++++|+... +.|+.+|...|-.++.. .+|-.. ..++.+.+.--| ||.-..
T Consensus 68 ~~~~~l~~~~~~~~----------------~~Gvdavl~~~gi~~d~-~Li~~L--~~~tv~gs~~~ggl~g~~~~~d~~ 128 (307)
T 3fok_A 68 NRYELLERMAIALS----------------RPGVDGVLGTPDIIDDL-AALGLL--DDKIVVGSMNRGGLRGASFEMDDR 128 (307)
T ss_dssp CHHHHHHHHHHHHH----------------STTCCEEEECHHHHHHH-HHTTCC--TTCEEEEECCCCSCTTCTTTTSCC
T ss_pred cHHHHHHHHHHHHh----------------ccCCCEEEECcchhhcc-cceEEe--cCcccccccCccccccCCCCcccc
Confidence 56788889988887 67999999999877654 334332 123333333101 665443
Q ss_pred CHHHHHHHHHHHHHCCCCeeee--ecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEe--e---------ccCCChH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDI--VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA--V---------GELKTSE 283 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~--Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlE--t---------~~L~t~e 283 (387)
.+. ..+++|+++|||-+=| -+|++ +.....-.+++.++++.|+. .-+=+++| . ... +++
T Consensus 129 ~~~---~sVe~AvrlGADaV~~l~~i~~G---s~~e~~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~-dp~ 200 (307)
T 3fok_A 129 YTG---YNVSSMVDRGVDFAKTLVRINLS---DAGTAPTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDL-STD 200 (307)
T ss_dssp CCS---CCHHHHHHHTCCEEEEEEEECTT---CTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECC-SHH
T ss_pred ccc---cCHHHHHHCCCCEEEEEEEECCC---ChhHHHHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCC-CHH
Confidence 333 3678899999999884 46765 23346777899999999864 22445555 1 123 678
Q ss_pred HHHHHHHHHHHcCCC----EEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCC--CHHHHHHHHHHHHH
Q psy10250 284 NIYCASMTAMFAGSD----FIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIS--TFEDSVRWIYLVLI 357 (387)
Q Consensus 284 ~i~~a~~ia~~aGaD----fVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIr--t~~~a~~~i~l~~~ 357 (387)
.+..+++++.+.||| +|||. |. -+++ .| .+. ..+.|=.+||=+ +.++++++..-+-+
T Consensus 201 ~Va~aaRiAaELGADs~~tivK~~--y~---e~f~-------~V---v~a--~~vPVViaGG~k~~~~~e~L~~v~~A~~ 263 (307)
T 3fok_A 201 AVIQSVAIAAGLGNDSSYTWMKLP--VV---EEME-------RV---MES--TTMPTLLLGGEGGNDPDATFASWEHALT 263 (307)
T ss_dssp HHHHHHHHHHTCSSCCSSEEEEEE--CC---TTHH-------HH---GGG--CSSCEEEECCSCC--CHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCcCCCEEEeC--Cc---HHHH-------HH---HHh--CCCCEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 99992 21 1221 11 222 357788899988 56788888754333
Q ss_pred hcCC
Q psy10250 358 MLGP 361 (387)
Q Consensus 358 ~~Ga 361 (387)
..|+
T Consensus 264 ~aGa 267 (307)
T 3fok_A 264 LPGV 267 (307)
T ss_dssp STTE
T ss_pred hCCC
Confidence 3343
No 81
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.37 E-value=0.0017 Score=63.09 Aligned_cols=75 Identities=19% Similarity=0.129 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHHcCCC-----eeeeecchhHHhcCChhHH---HHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHH
Q psy10250 8 LLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYA 79 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~-----EiD~Vin~~~lk~g~~~~v---~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a 79 (387)
+...|..|.+.+...|++ +.|+|+ +|++++..+ .+.++++++.++. .+|+++|+..| +|+..+
T Consensus 143 ~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl---ee~~~A 213 (299)
T 2jbm_A 143 TPGFRLVEKYGLLVGGAASHRYDLGGLVM----VKDNHVVAAGGVEKAVRAARQAADF--ALKVEVECSSL---QEAVQA 213 (299)
T ss_dssp CTTCHHHHHHHHHHTTCBCCCCSTTSSEE----ECHHHHHHHTSHHHHHHHHHHHHTT--TSCEEEEESSH---HHHHHH
T ss_pred ChhhHHHHHHHHHHCCCCceecCccceEE----ecccHHHHcCCHHHHHHHHHHhCCc--CCeEEEecCCH---HHHHHH
Confidence 356789999999999999 999998 677777665 7788888877763 47999999765 667666
Q ss_pred HHHHHHcCCCEEecCC
Q psy10250 80 SMTAMFAGSDFIKTST 95 (387)
Q Consensus 80 ~~~a~~ag~dfvKTST 95 (387)
+ ++|+|||+.+|
T Consensus 214 ~----~aGaD~I~ld~ 225 (299)
T 2jbm_A 214 A----EAGADLVLLDN 225 (299)
T ss_dssp H----HTTCSEEEEES
T ss_pred H----HcCCCEEEECC
Confidence 5 57999999987
No 82
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.34 E-value=0.05 Score=54.09 Aligned_cols=121 Identities=14% Similarity=0.097 Sum_probs=76.3
Q ss_pred HHHHHHH-CCCCeeeeecCchh--hh-cC--ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCC
Q psy10250 224 EIELLAK-QKVDEVDIVIQRSL--VL-NN--QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 224 Ea~~Ai~-~GAdEID~Vin~~~--lk-~g--~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGa 297 (387)
+++.+++ .|||-+-+=+|... +. .| ++..+.+.|+.+++..+-++.+|- ++.=.+.+ .++.+.++|+
T Consensus 159 ~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~---vg~g~s~e----~A~~l~~aGa 231 (365)
T 3sr7_A 159 AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKE---VGFGMDVK----TIQTAIDLGV 231 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE---CSSCCCHH----HHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE---CCCCCCHH----HHHHHHHcCC
Confidence 6777774 59998776666531 11 33 445577889999988765577883 33211444 3466789999
Q ss_pred CEEEcCCCCCCCC-----------------CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 298 DFIKTSTGKEKTN-----------------ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 298 DfVKTSTGf~~~g-----------------at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
|+|.-+-+ +... ..++.. ..+... +...+++.|=++||||+..|+.+++ .+|
T Consensus 232 d~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~----~~L~~v-~~~~~~ipvia~GGI~~g~Dv~KaL-----alG 300 (365)
T 3sr7_A 232 KTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTA----QVLLNA-QPLMDKVEILASGGIRHPLDIIKAL-----VLG 300 (365)
T ss_dssp CEEECCCB-C--------------CGGGTTCSCBHH----HHHHHH-GGGTTTSEEEECSSCCSHHHHHHHH-----HHT
T ss_pred CEEEEeCC-CCcccchhhccccccccccccccccHH----HHHHHH-HHhcCCCeEEEeCCCCCHHHHHHHH-----HcC
Confidence 99986532 1110 011111 223322 2345678999999999999999999 589
Q ss_pred CC
Q psy10250 361 PD 362 (387)
Q Consensus 361 a~ 362 (387)
|+
T Consensus 301 Ad 302 (365)
T 3sr7_A 301 AK 302 (365)
T ss_dssp CS
T ss_pred CC
Confidence 95
No 83
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.32 E-value=0.034 Score=55.08 Aligned_cols=126 Identities=10% Similarity=0.016 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhh-----------cCC--------hhHHHHHHHHHHHHhCC-CcceEEEEee--
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVL-----------NNQ--------WPELFSEVKQMKEKCGE-KIHMKTILAV-- 276 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk-----------~g~--------~~~v~~Ei~~v~~~~~~-~~~lKvIlEt-- 276 (387)
+.=+.-|+.|.+.|+|-|++=.-=|+|. ... ...+.+=+++|+++++. ++.+|+=...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 3445567788999999999843212111 111 23455667888888874 2334433211
Q ss_pred ----ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 277 ----GELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 277 ----~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
+-. +.++....++.+.++|+|||--|.|........+ .+.++.+++.+ ++.|=+.||| |.++|.+++
T Consensus 241 ~~~~~~~-~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~-----~~~~~~i~~~~--~iPvi~~Ggi-~~~~a~~~l 311 (365)
T 2gou_A 241 NGTVDAD-PILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP-----VSFKRALREAY--QGVLIYAGRY-NAEKAEQAI 311 (365)
T ss_dssp TSCCCSS-HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC-----HHHHHHHHHHC--CSEEEEESSC-CHHHHHHHH
T ss_pred CCCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc-----HHHHHHHHHHC--CCcEEEeCCC-CHHHHHHHH
Confidence 112 3466777888999999999998877322112111 13456666665 3678889999 999999999
Q ss_pred H
Q psy10250 353 Y 353 (387)
Q Consensus 353 ~ 353 (387)
.
T Consensus 312 ~ 312 (365)
T 2gou_A 312 N 312 (365)
T ss_dssp H
T ss_pred H
Confidence 4
No 84
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.31 E-value=0.49 Score=46.23 Aligned_cols=207 Identities=12% Similarity=0.040 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccc---ccccC-CC-CCCHH
Q psy10250 72 TSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFI---DLTTL-SG-DDTEA 146 (387)
Q Consensus 72 ~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I---D~T~L-~~-~~T~~ 146 (387)
+.+++.+..+...++|+|.|--.-|++.+++++...+.+ +...++++++.+.+ -...| .| ....+
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~----------~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~ 97 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGR----------HTDLEYIEAVAGEISHAQIATLLLPGIGSVH 97 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCS----------SCHHHHHHHHHTTCSSSEEEEEECBTTBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCC----------CCHHHHHHHHHhhCCCCEEEEEecCCcccHH
Confidence 456677778888899999999876665555554422211 11112333443332 22333 33 22455
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHH---HHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHH
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVV---DVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLH 223 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~---~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~ 223 (387)
++++..+.-. ..-.|..+++.+. .+.+..+. .+..+...+... ...+.+.-+.
T Consensus 98 ~i~~a~~aGv------------------d~v~I~~~~s~~~~~~~~i~~ak~----~G~~v~~~~~~a--~~~~~e~~~~ 153 (345)
T 1nvm_A 98 DLKNAYQAGA------------------RVVRVATHCTEADVSKQHIEYARN----LGMDTVGFLMMS--HMIPAEKLAE 153 (345)
T ss_dssp HHHHHHHHTC------------------CEEEEEEETTCGGGGHHHHHHHHH----HTCEEEEEEEST--TSSCHHHHHH
T ss_pred HHHHHHhCCc------------------CEEEEEEeccHHHHHHHHHHHHHH----CCCEEEEEEEeC--CCCCHHHHHH
Confidence 5444433222 2234555553222 33333333 244443331122 2455666666
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
-++.+.+.||+.|=+.=-.|.. ..+.+.+-++.+++..++ ++.|....=+|.-.=..-+..|.++|++.|-+|
T Consensus 154 ia~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~~~----~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~t 226 (345)
T 1nvm_A 154 QGKLMESYGATCIYMADSGGAM---SMNDIRDRMRAFKAVLKP----ETQVGMHAHHNLSLGVANSIVAVEEGCDRVDAS 226 (345)
T ss_dssp HHHHHHHHTCSEEEEECTTCCC---CHHHHHHHHHHHHHHSCT----TSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred HHHHHHHCCCCEEEECCCcCcc---CHHHHHHHHHHHHHhcCC----CceEEEEECCCccHHHHHHHHHHHcCCCEEEec
Confidence 6788888899987666445543 378888888888887752 223444333333333445678999999999987
Q ss_pred C-CCC--CCCCChhhhHhH
Q psy10250 304 T-GKE--KTNATIPAGIIM 319 (387)
Q Consensus 304 T-Gf~--~~gat~~~~~~m 319 (387)
- |+| .+++.+|.+..+
T Consensus 227 v~GlG~~aGN~~le~lv~~ 245 (345)
T 1nvm_A 227 LAGMGAGAGNAPLEVFIAV 245 (345)
T ss_dssp GGGCSSTTCBCBHHHHHHH
T ss_pred chhccCCccCcCHHHHHHH
Confidence 5 555 356777654433
No 85
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=96.30 E-value=0.018 Score=55.71 Aligned_cols=125 Identities=19% Similarity=0.120 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecC----------chhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQ----------RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin----------~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.+.=..-++.|.+. +|.||+=+. +|.-...+.+.+.+-+++++++++-++.+|+=+ +.. .++ ...
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--G~~-~~~-~~~ 144 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL--GWE-KNE-VEE 144 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES--CSS-SCC-HHH
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC--CCC-hHH-HHH
Confidence 45555566677777 999887431 233344577888888999998886434555543 433 223 336
Q ss_pred HHHHHHHcCCCEEEcCCCCCC----CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEK----TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~----~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.++.+.++|+|+|--+.|... +.+..+ .++.++ . ++.|=++|||+|.+++.+++. ..|++
T Consensus 145 ~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~-------~i~~i~---~-~ipVi~~GgI~s~~da~~~l~----~~gad 208 (318)
T 1vhn_A 145 IYRILVEEGVDEVFIHTRTVVQSFTGRAEWK-------ALSVLE---K-RIPTFVSGDIFTPEDAKRALE----ESGCD 208 (318)
T ss_dssp HHHHHHHTTCCEEEEESSCTTTTTSSCCCGG-------GGGGSC---C-SSCEEEESSCCSHHHHHHHHH----HHCCS
T ss_pred HHHHHHHhCCCEEEEcCCCccccCCCCcCHH-------HHHHHH---c-CCeEEEECCcCCHHHHHHHHH----cCCCC
Confidence 778889999999965433211 123332 222222 2 788899999999999999995 36875
No 86
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=96.28 E-value=0.058 Score=54.55 Aligned_cols=125 Identities=13% Similarity=0.101 Sum_probs=79.1
Q ss_pred HHHHHHHHCCCCeeeeecCchhh-----------h---------cCChhHHHHHHHHHHHHh----CCCcc--eEEEEee
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLV-----------L---------NNQWPELFSEVKQMKEKC----GEKIH--MKTILAV 276 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~l-----------k---------~g~~~~v~~Ei~~v~~~~----~~~~~--lKvIlEt 276 (387)
.-|+.|.+.|.|-||+=.-=|+| . .++...+.+=+++|++++ ++..+ +|+=.+.
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~ 253 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEE 253 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCE
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccccc
Confidence 44778899999999985332111 1 122245556667788777 33223 3432211
Q ss_pred ---c--cCCChHHHHHHHHHHHH-cCCCEEEcCCCCC-----C---CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccC
Q psy10250 277 ---G--ELKTSENIYCASMTAMF-AGSDFIKTSTGKE-----K---TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGI 342 (387)
Q Consensus 277 ---~--~L~t~e~i~~a~~ia~~-aGaDfVKTSTGf~-----~---~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGI 342 (387)
+ -+ +.++....++...+ +|+|||--|.|-. . .+.... ...++.+++.+++++.|=+.|||
T Consensus 254 ~~~~~~G~-~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~-----~~~a~~Ik~~v~~~iPVI~~GgI 327 (419)
T 3l5a_A 254 TRGSDLGY-TIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFG-----RPVNQIVYEHLAGRIPLIASGGI 327 (419)
T ss_dssp EETTEEEE-CHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTT-----SBHHHHHHHHHTTSSCEEECSSC
T ss_pred ccCCCCCC-CHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcccc-----HHHHHHHHHHcCCCCeEEEECCC
Confidence 0 13 45677778888888 9999999887631 0 111100 02345567777778889999999
Q ss_pred CCHHHHHHHHH
Q psy10250 343 STFEDSVRWIY 353 (387)
Q Consensus 343 rt~~~a~~~i~ 353 (387)
+|.++|.+++.
T Consensus 328 ~t~e~Ae~~L~ 338 (419)
T 3l5a_A 328 NSPESALDALQ 338 (419)
T ss_dssp CSHHHHHHHGG
T ss_pred CCHHHHHHHHH
Confidence 99999999994
No 87
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.25 E-value=0.045 Score=51.69 Aligned_cols=127 Identities=12% Similarity=0.084 Sum_probs=71.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCee---eeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-EeeccCCChHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEV---DIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGELKTSENIYCAS 289 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEI---D~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~L~t~e~i~~a~ 289 (387)
|+.+.+.-...++.+.+.|.+.+ |++.+... .++...+-++.+++..++ -+++| +.+. +.+++
T Consensus 74 ~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~----~~~e~~~~~~~a~~~~~~--g~~vi~~~~~---~~~~a---- 140 (264)
T 1xm3_A 74 GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRS----LLPDPVETLKASEQLLEE--GFIVLPYTSD---DVVLA---- 140 (264)
T ss_dssp TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTT----CCBCHHHHHHHHHHHHHT--TCCEEEEECS---CHHHH----
T ss_pred ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcc----cccchHHHHHHHHHHHCC--CeEEEEEcCC---CHHHH----
Confidence 56666665566666766654443 22222110 123334444445554443 35666 5554 33433
Q ss_pred HHHHHcCCCEEEcC-CCC---CCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 290 MTAMFAGSDFIKTS-TGK---EKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 290 ~ia~~aGaDfVKTS-TGf---~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+.+.+.|+||| .+ .|. .....++ +.++.+++.. ++.|=+-|||+|.+++.+++ .+|++
T Consensus 141 ~~~~~~gad~v-~~~~~~~Gt~~~~~~~-------~~l~~i~~~~--~iPviv~gGI~t~eda~~~~-----~~GAd--- 202 (264)
T 1xm3_A 141 RKLEELGVHAI-MPGASPIGSGQGILNP-------LNLSFIIEQA--KVPVIVDAGIGSPKDAAYAM-----ELGAD--- 202 (264)
T ss_dssp HHHHHHTCSCB-EECSSSTTCCCCCSCH-------HHHHHHHHHC--SSCBEEESCCCSHHHHHHHH-----HTTCS---
T ss_pred HHHHHhCCCEE-EECCcccCCCCCCCCH-------HHHHHHHhcC--CCCEEEEeCCCCHHHHHHHH-----HcCCC---
Confidence 44567899999 44 222 1111223 3455555543 56777789999999999999 58985
Q ss_pred CCcceeec
Q psy10250 366 KDLFRIGA 373 (387)
Q Consensus 366 ~~~~RIGt 373 (387)
..-+|+
T Consensus 203 --gViVGS 208 (264)
T 1xm3_A 203 --GVLLNT 208 (264)
T ss_dssp --EEEESH
T ss_pred --EEEEcH
Confidence 345565
No 88
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.25 E-value=0.022 Score=55.19 Aligned_cols=80 Identities=13% Similarity=0.170 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEecc----CCC---CH-HHHHHHHHHHHH
Q psy10250 14 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVG----ELK---TS-ENIYYASMTAMF 85 (387)
Q Consensus 14 ~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~----~L~---~~-e~i~~a~~~a~~ 85 (387)
.+++.|++.|||-+=+-++++ +..+-..-.++++++++.|+. .-+.+|+|.- -+. ++ +.+..+++.+.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~ 188 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGD 188 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHHHHHHHHH
Confidence 468899999999999999988 443357788899999999875 2467888862 121 23 667888999999
Q ss_pred cCCCEEecCCC
Q psy10250 86 AGSDFIKTSTG 96 (387)
Q Consensus 86 ag~dfvKTSTG 96 (387)
.|+||||+..+
T Consensus 189 lGaD~iKv~~~ 199 (304)
T 1to3_A 189 SGADLYKVEMP 199 (304)
T ss_dssp SSCSEEEECCG
T ss_pred cCCCEEEeCCC
Confidence 99999999885
No 89
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.21 E-value=0.054 Score=55.78 Aligned_cols=120 Identities=21% Similarity=0.196 Sum_probs=72.6
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST 304 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST 304 (387)
++.+++.|++-+ +++.. .|+...+.+.++.+++..++ .+.||.-+ ..+.+. ++.++++|+|+|+.+.
T Consensus 247 ~~~l~e~gv~~l--~Vd~~---~g~~~~~~~~i~~lk~~~~~--~~~Vi~G~--V~t~~~----a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 247 VPALVEAGADVL--CIDSS---DGFSEWQKITIGWIREKYGD--KVKVGAGN--IVDGEG----FRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHTCSEE--EECCS---CCCSHHHHHHHHHHHHHHGG--GSCEEEEE--ECSHHH----HHHHHHHTCSEEEECS
T ss_pred HHHHHhhhccce--EEecc---cCcccchhhHHHHHHHhCCC--CceEeecc--ccCHHH----HHHHHHhCCCeEEecc
Confidence 566677788753 44332 46667788888888876532 14556432 324443 3557899999999843
Q ss_pred CCCCCC----------CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 305 GKEKTN----------ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 305 Gf~~~g----------at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|=+... +++..+..+.+..+.+.+..+.++.|=++|||++..++.+.+ .+||+
T Consensus 314 ~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAl-----alGA~ 376 (503)
T 1me8_A 314 GGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLAL-----AMGAD 376 (503)
T ss_dssp SCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred cCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 321111 122222222222233333345468899999999999999999 59995
No 90
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.20 E-value=0.055 Score=53.75 Aligned_cols=89 Identities=19% Similarity=0.239 Sum_probs=55.7
Q ss_pred HHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCC----CCCChhhhHhHHHHHHHHHHH--
Q psy10250 256 EVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEK----TNATIPAGIIMCSAIKHFHKL-- 329 (387)
Q Consensus 256 Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~----~gat~~~~~~m~~~v~~~~~~-- 329 (387)
+|..+++..+ +.||+ -+-. +.++ ++.+.++|+|+|+-|+|-.. .+..++.. +.+..+++.
T Consensus 202 ~i~~l~~~~~----~pvi~-ggi~-t~e~----a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~----~~l~~v~~~~~ 267 (393)
T 2qr6_A 202 NLKEFIGSLD----VPVIA-GGVN-DYTT----ALHMMRTGAVGIIVGGGENTNSLALGMEVSMA----TAIADVAAARR 267 (393)
T ss_dssp CHHHHHHHCS----SCEEE-ECCC-SHHH----HHHHHTTTCSEEEESCCSCCHHHHTSCCCCHH----HHHHHHHHHHH
T ss_pred HHHHHHHhcC----CCEEE-CCcC-CHHH----HHHHHHcCCCEEEECCCcccccccCCCCCChH----HHHHHHHHHHH
Confidence 5677777653 34555 2334 6554 45667899999999875311 01112211 233322332
Q ss_pred -----cCCC-ceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 330 -----SGKK-IGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 330 -----~~~~-~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
++++ +.|=++|||++..++.+++ .+|++.
T Consensus 268 ~~~~~~~~~~ipvia~GGI~~~~dv~kal-----alGA~~ 302 (393)
T 2qr6_A 268 DYLDETGGRYVHIIADGSIENSGDVVKAI-----ACGADA 302 (393)
T ss_dssp HHHHHHTSCCCEEEECSSCCSHHHHHHHH-----HHTCSE
T ss_pred HhHhhcCCcceEEEEECCCCCHHHHHHHH-----HcCCCE
Confidence 4554 8999999999999999999 489864
No 91
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=96.12 E-value=0.21 Score=47.96 Aligned_cols=193 Identities=13% Similarity=0.067 Sum_probs=119.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE----CCccHHH---HHHHhhhcCCCCCceEEEEecCCC
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV----YPARVVD---VIKVLDRENARDDVKVASVAAGFP 212 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV----~P~~v~~---a~~~L~~~~~~~~v~v~tVvigFP 212 (387)
.-..+.++..++++... +.|+..+-+ +|.+++. ..+.++......+++++.. + |
T Consensus 24 ~~~~~~e~k~~i~~~L~----------------~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l-~--~ 84 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDLS----------------AAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAAL-A--P 84 (302)
T ss_dssp SSCCCHHHHHHHHHHHH----------------HTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEE-C--C
T ss_pred CCCCCHHHHHHHHHHHH----------------HcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEE-e--C
Confidence 33467888888887776 445555544 3543332 1122222111357788766 3 3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC--------
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL-------- 279 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L-------- 279 (387)
....++.|++.|++.|-+....+.+ ....+++..+.++++++.++. .-++|-.+.++.
T Consensus 85 --------~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~ 155 (302)
T 2ftp_A 85 --------NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ-HQVRVRGYISCVLGCPYDGD 155 (302)
T ss_dssp --------SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTBC
T ss_pred --------CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCC
Confidence 2467889999999999987665432 235688888999999988864 234554333321
Q ss_pred CChHHHHHHHHHHHHcCCCE--EEcCCCCCCCCCChhhhHhHHHHHHHHHHHcC-CCceEeE--eccCCCHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGSDF--IKTSTGKEKTNATIPAGIIMCSAIKHFHKLSG-KKIGLKP--AGGISTFEDSVRWIYL 354 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDf--VKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~-~~~gIKa--sGGIrt~~~a~~~i~l 354 (387)
.+++...+.++.+.+.|+|. ++++.|. .+|..+..++ +.+++.++ -.+++.. --|.-..+ ++.-+
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G~----~~P~~~~~lv---~~l~~~~~~~~l~~H~Hn~~Gla~An-~laAv-- 225 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIGV----GTAGATRRLI---EAVASEVPRERLAGHFHDTYGQALAN-IYASL-- 225 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSSC----CCHHHHHHHH---HHHTTTSCGGGEEEEEBCTTSCHHHH-HHHHH--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCC----cCHHHHHHHH---HHHHHhCCCCeEEEEeCCCccHHHHH-HHHHH--
Confidence 36788888999999999996 5666775 5787655554 34444453 3566666 34544433 34444
Q ss_pred HHHhcCCCccCCCcceeec
Q psy10250 355 VLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 355 ~~~~~Ga~w~~~~~~RIGt 373 (387)
++|+++++....=+|-
T Consensus 226 ---~aGa~~vd~tv~GlG~ 241 (302)
T 2ftp_A 226 ---LEGIAVFDSSVAGLGG 241 (302)
T ss_dssp ---HTTCCEEEEBGGGCCB
T ss_pred ---HhCCCEEEecccccCC
Confidence 5899888777764543
No 92
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.09 E-value=0.15 Score=50.06 Aligned_cols=186 Identities=11% Similarity=0.078 Sum_probs=110.4
Q ss_pred CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEec------CCCCCCCC
Q psy10250 144 TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAA------GFPSGQYL 217 (387)
Q Consensus 144 T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvi------gFP~G~~~ 217 (387)
.-.++++++.++. .-+..+|-+.|.|--.+..... ++..+-.- . .|+.|..+
T Consensus 51 ~l~~~K~lv~~~~----------------~~~asaILlD~~~G~~a~~~~~-----~~~GLii~-~E~~G~~~~~~gr~p 108 (332)
T 3iv3_A 51 QMEELKVLVSEEL----------------TPYASSILLDPEYGLPAAQARD-----REAGLLLA-YEKTGYDANTTSRLP 108 (332)
T ss_dssp HHHHHHHHHHHHH----------------GGGSSEEEECTTTCHHHHHTSC-----TTCEEEEE-CBCCCCCTTSSCCCC
T ss_pred HHHHHHHHHHHHH----------------hcCCcEEEEchhhCHHHhcccc-----CCCcEEEE-eccCCCCcCCCCCCC
Confidence 4566777787777 3456899999977444433321 22222222 2 45556433
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChh----HHHHHHHHHHHHhCCCcceEEEEee---cc---C-CC-----
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWP----ELFSEVKQMKEKCGEKIHMKTILAV---GE---L-KT----- 281 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~----~v~~Ei~~v~~~~~~~~~lKvIlEt---~~---L-~t----- 281 (387)
...-.--+++|++.|||-+=+-+|++. .+-+ .-.+.+.+|.+.|+. --+=+++|. +. - .+
T Consensus 109 ~~l~~~sve~a~~~GADAVk~lv~~g~---d~~~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a~ 184 (332)
T 3iv3_A 109 DCLVDWSIKRLKEAGADAVKFLLYYDV---DGDPQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFAK 184 (332)
T ss_dssp CBCTTCCHHHHHHTTCSEEEEEEEECT---TSCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHHT
T ss_pred ccccccCHHHHHHcCCCEEEEEEEcCC---CchHHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhhc
Confidence 222334589999999999999999974 2222 345678888888864 123445544 11 1 11
Q ss_pred --hHHHHHHHHHH--HHcCCCEEEcC-CC-------CCCCCCChhhhHhHHHHHHHHHHHc-CCCceE-eEeccCCCHHH
Q psy10250 282 --SENIYCASMTA--MFAGSDFIKTS-TG-------KEKTNATIPAGIIMCSAIKHFHKLS-GKKIGL-KPAGGISTFED 347 (387)
Q Consensus 282 --~e~i~~a~~ia--~~aGaDfVKTS-TG-------f~~~gat~~~~~~m~~~v~~~~~~~-~~~~gI-KasGGIrt~~~ 347 (387)
++.+..+++.+ .+.|+|.+||. || |+.+ +.+...-++.+.|++.+ ...+.+ =.|||+ +.++
T Consensus 185 ~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~----~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~ 259 (332)
T 3iv3_A 185 VKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEG----EVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAEL 259 (332)
T ss_dssp THHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSS----CCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHH
T ss_pred cCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccc----cccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHH
Confidence 34488899999 67799999996 33 3321 11222224555565543 335563 469998 5677
Q ss_pred HHHHHHHHHHhcCC
Q psy10250 348 SVRWIYLVLIMLGP 361 (387)
Q Consensus 348 a~~~i~l~~~~~Ga 361 (387)
.+.++..+.+ +|+
T Consensus 260 fl~~v~~A~~-aGa 272 (332)
T 3iv3_A 260 FQETLVFAHK-AGA 272 (332)
T ss_dssp HHHHHHHHHH-HTC
T ss_pred HHHHHHHHHH-cCC
Confidence 7777754433 565
No 93
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.03 E-value=0.0015 Score=62.60 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHHcCCC-----eeeeecchhHHhcCChhHH---HHHHHHHHHHcccCccEEEEEeccCCCCHHHHHH
Q psy10250 7 YLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCEEKIHMKTILAVGELKTSENIYY 78 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~-----EiD~Vin~~~lk~g~~~~v---~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~ 78 (387)
.+...|..|.+.+...|++ +.|+|+ +|++++..+ .+.++++++.++. .+|+++|+..+ +|+..
T Consensus 127 t~p~~r~~~~~A~~~gG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl---ee~~~ 197 (273)
T 2b7n_A 127 TRPLLRIFEKYSVLNGGASNHRLGLDDALM----LKDTHLRHVKDLKSFLTHARKNLPF--TAKIEIECESF---EEAKN 197 (273)
T ss_dssp CCTTCHHHHHHHHHTTTCCCCCSSTTTCEE----ECHHHHTTCSSHHHHHHHHGGGSCT--TCCEEEEESSH---HHHHH
T ss_pred CChhhHHHHHHHHHhCCCcceEcCccceEE----eeCCHHHHhCCHHHHHHHHHHhCCC--CceEEEEcCCH---HHHHH
Confidence 3467899999999999999 999998 666665544 6677777665543 47999999755 66766
Q ss_pred HHHHHHHcCCCEEecCC
Q psy10250 79 ASMTAMFAGSDFIKTST 95 (387)
Q Consensus 79 a~~~a~~ag~dfvKTST 95 (387)
++ ++|+|||+++|
T Consensus 198 A~----~aGaD~I~ld~ 210 (273)
T 2b7n_A 198 AM----NAGADIVMCDN 210 (273)
T ss_dssp HH----HHTCSEEEEET
T ss_pred HH----HcCCCEEEECC
Confidence 65 47999999987
No 94
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.88 E-value=0.054 Score=51.79 Aligned_cols=117 Identities=18% Similarity=0.181 Sum_probs=76.2
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
++.+|...|||-|=+ +...+ + .++++.+.+.++. .-+.+++|+. +.++..+ |.++|+|+|=+.
T Consensus 134 qi~ea~~~GAD~VlL--i~a~L-~------~~~l~~l~~~a~~-lGl~~lvevh---~~eEl~~----A~~~ga~iIGin 196 (272)
T 3tsm_A 134 QVYEARSWGADCILI--IMASV-D------DDLAKELEDTAFA-LGMDALIEVH---DEAEMER----ALKLSSRLLGVN 196 (272)
T ss_dssp HHHHHHHTTCSEEEE--ETTTS-C------HHHHHHHHHHHHH-TTCEEEEEEC---SHHHHHH----HTTSCCSEEEEE
T ss_pred HHHHHHHcCCCEEEE--ccccc-C------HHHHHHHHHHHHH-cCCeEEEEeC---CHHHHHH----HHhcCCCEEEEC
Confidence 577888999998433 33333 1 1455666655554 3489999996 4466644 457899999442
Q ss_pred -CCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 304 -TGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 304 -TGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
.+.......+ +....+.+..+..+-+=+-|||+|.+|+..+. .+|++ .+-||++
T Consensus 197 nr~l~t~~~dl-------~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~-----~~Ga~-----gvLVG~a 251 (272)
T 3tsm_A 197 NRNLRSFEVNL-------AVSERLAKMAPSDRLLVGESGIFTHEDCLRLE-----KSGIG-----TFLIGES 251 (272)
T ss_dssp CBCTTTCCBCT-------HHHHHHHHHSCTTSEEEEESSCCSHHHHHHHH-----TTTCC-----EEEECHH
T ss_pred CCCCccCCCCh-------HHHHHHHHhCCCCCcEEEECCCCCHHHHHHHH-----HcCCC-----EEEEcHH
Confidence 1111112223 23444555667667677889999999999999 68985 6888875
No 95
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=95.87 E-value=0.4 Score=46.27 Aligned_cols=130 Identities=15% Similarity=0.104 Sum_probs=80.5
Q ss_pred CCCC-CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 210 GFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 210 gFP~-G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
|.|+ |..+.+.-+.-++.+.+.||++|-+.=-.|. .....+++-++.+++..++ +.|+...=+|.-.-..-
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~-----~~l~~H~Hnd~Gla~AN 218 (307)
T 1ydo_A 147 GCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGA---ANPAQVETVLEALLARFPA-----NQIALHFHDTRGTALAN 218 (307)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCC---CCHHHHHHHHHHHHTTSCG-----GGEEEECBGGGSCHHHH
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhCCC-----CeEEEEECCCCchHHHH
Confidence 5575 5556666666688888999999877744553 3577888888888765532 23555443332323344
Q ss_pred HHHHHHcCCCEEEcCC-CCCC--------CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 289 SMTAMFAGSDFIKTST-GKEK--------TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 289 ~~ia~~aGaDfVKTST-Gf~~--------~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
+..|+++|++.|-+|- |+|. +++.+|.+..++ +..+... || +++.....-.++.+..
T Consensus 219 ~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L-------~~~g~~t------~i-dl~~L~~~~~~v~~~~ 284 (307)
T 1ydo_A 219 MVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYML-------EQMDIKT------NV-KLEKLLSAAKWIEEKM 284 (307)
T ss_dssp HHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHH-------HHTTCBC------CC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHH-------HhcCCCC------Cc-CHHHHHHHHHHHHHHH
Confidence 6789999999999876 4653 466676443332 2223232 34 4566666655556677
Q ss_pred CC
Q psy10250 360 GP 361 (387)
Q Consensus 360 Ga 361 (387)
|.
T Consensus 285 ~~ 286 (307)
T 1ydo_A 285 GK 286 (307)
T ss_dssp TS
T ss_pred CC
Confidence 75
No 96
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.78 E-value=0.13 Score=50.82 Aligned_cols=126 Identities=10% Similarity=0.030 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhh----hc-------C--------ChhHHHHHHHHHHHHhCCC-cceEEEEee--
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLV----LN-------N--------QWPELFSEVKQMKEKCGEK-IHMKTILAV-- 276 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~l----k~-------g--------~~~~v~~Ei~~v~~~~~~~-~~lKvIlEt-- 276 (387)
+.=+..|+.|.+.|+|-|++=.--|+| .+ . +...+.+=+++|++++++. +.+|+=...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 344556788899999999973322221 11 1 2234556678888888742 333332221
Q ss_pred -----ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHH
Q psy10250 277 -----GELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 277 -----~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
... +.++....++.+.++|+|||--+.|....+.... .+.++.+++.+ ++.|=+.||| |.++|.++
T Consensus 241 ~~~~~~~~-~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~-----~~~~~~v~~~~--~iPvi~~Ggi-t~~~a~~~ 311 (364)
T 1vyr_A 241 QNVDNGPN-EEADALYLIEELAKRGIAYLHMSETDLAGGKPYS-----EAFRQKVRERF--HGVIIGAGAY-TAEKAEDL 311 (364)
T ss_dssp TTBCCCTT-HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC-----HHHHHHHHHHC--CSEEEEESSC-CHHHHHHH
T ss_pred ccccCCCC-CHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc-----HHHHHHHHHHC--CCCEEEECCc-CHHHHHHH
Confidence 111 3455667788889999999998875321111111 13455566665 4678889999 99999999
Q ss_pred HH
Q psy10250 352 IY 353 (387)
Q Consensus 352 i~ 353 (387)
+.
T Consensus 312 l~ 313 (364)
T 1vyr_A 312 IG 313 (364)
T ss_dssp HH
T ss_pred HH
Confidence 94
No 97
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.66 E-value=0.048 Score=54.32 Aligned_cols=85 Identities=16% Similarity=0.246 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC----CCCCChhhhHhHHHHHHHHHHH
Q psy10250 254 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE----KTNATIPAGIIMCSAIKHFHKL 329 (387)
Q Consensus 254 ~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~----~~gat~~~~~~m~~~v~~~~~~ 329 (387)
.+.|+.+++.++-+..+|-+ . +.++ ++.+.++|+|+|+-|...+ .+.++++ .++.+++.
T Consensus 214 ~~~i~~i~~~~~~Pv~vkgv-----~-t~e~----a~~a~~aGad~I~vs~~gg~~~d~~~~~~~-------~l~~v~~~ 276 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVKGL-----L-SAED----ADRCIAEGADGVILSNHGGRQLDCAISPME-------VLAQSVAK 276 (380)
T ss_dssp HHHHHHHHHHCCSEEEEEEE-----C-CHHH----HHHHHHTTCSEEEECCGGGTSCTTCCCGGG-------THHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEec-----C-cHHH----HHHHHHcCCCEEEEcCCCCCcCCCCcCHHH-------HHHHHHHH
Confidence 46788888877544666743 3 5453 4667899999999865221 1123332 34444555
Q ss_pred cCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 330 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 330 ~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++. .|=++|||++.+++.+++ .+|++
T Consensus 277 ~~~--pVia~GGI~~~~dv~kal-----~~GAd 302 (380)
T 1p4c_A 277 TGK--PVLIDSGFRRGSDIVKAL-----ALGAE 302 (380)
T ss_dssp HCS--CEEECSSCCSHHHHHHHH-----HTTCS
T ss_pred cCC--eEEEECCCCCHHHHHHHH-----HhCCc
Confidence 544 788999999999999999 48985
No 98
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.64 E-value=0.096 Score=50.22 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCceEe--EeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 322 AIKHFHKLSGKKIGLK--PAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 322 ~v~~~~~~~~~~~gIK--asGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.++.+++.. ++.|= ++|||+|.+++..++ .+|++
T Consensus 198 ~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~-----~~Gad 233 (305)
T 2nv1_A 198 LLLQIKKDG--KLPVVNFAAGGVATPADAALMM-----QLGAD 233 (305)
T ss_dssp HHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHhc--CCCEEEEeccCCCCHHHHHHHH-----HcCCC
Confidence 344454443 34555 899999999999999 48985
No 99
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.50 E-value=1 Score=41.82 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 321 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 321 ~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+-|+.+++.. ++.|=+.|||+|.+++.+++ .+|++
T Consensus 191 ~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~-----~~GAd 225 (262)
T 1rd5_A 191 SLIQEVKKVT--NKPVAVGFGISKPEHVKQIA-----QWGAD 225 (262)
T ss_dssp HHHHHHHHHC--SSCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHhhc--CCeEEEECCcCCHHHHHHHH-----HcCCC
Confidence 3455566554 57788899999999999999 58986
No 100
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.47 E-value=0.16 Score=53.57 Aligned_cols=129 Identities=13% Similarity=0.104 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhh----hc---------------CChhHHHHHHHHHHHHhCCCcce--EEEEee--
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLV----LN---------------NQWPELFSEVKQMKEKCGEKIHM--KTILAV-- 276 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~l----k~---------------g~~~~v~~Ei~~v~~~~~~~~~l--KvIlEt-- 276 (387)
.=...|+.|.+.|.|-|++=.--|+| ++ ++...+.+=+++|++++++..++ |+=...
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 34566888899999999964322222 11 12344666778888888754444 443321
Q ss_pred -ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCC-CCC-----hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHH
Q psy10250 277 -GELKTSENIYCASMTAMFAGSDFIKTSTGKEKT-NAT-----IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSV 349 (387)
Q Consensus 277 -~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~-gat-----~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~ 349 (387)
+-+ +.++....++.+.++|+|||-.|.|+... ..+ ++. ...+.++.+++.+ ++.|=+.|||+|.++|.
T Consensus 222 ~~g~-~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~ 296 (671)
T 1ps9_A 222 EDGG-TFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRG--AFSWVTRKLKGHV--SLPLVTTNRINDPQVAD 296 (671)
T ss_dssp TTCC-CHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTT--TTHHHHHHHTTSC--SSCEEECSSCCSHHHHH
T ss_pred CCCC-CHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcc--hHHHHHHHHHHhc--CceEEEeCCCCCHHHHH
Confidence 123 45667778888899999999877665311 110 110 1123444554443 56777899999999999
Q ss_pred HHHH
Q psy10250 350 RWIY 353 (387)
Q Consensus 350 ~~i~ 353 (387)
+++.
T Consensus 297 ~~l~ 300 (671)
T 1ps9_A 297 DILS 300 (671)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9994
No 101
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=95.43 E-value=0.055 Score=52.52 Aligned_cols=88 Identities=11% Similarity=0.169 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+=++++++.++. +|+++|+.-| +|..+ |+++|+|.|-=-+ .+++ +++...+...+
T Consensus 194 i~~Av~~ar~~~p~---~kIeVEv~tl---~e~~e----Al~aGaDiImLDn------~s~~-------~l~~av~~~~~ 250 (300)
T 3l0g_A 194 ITLAIQRLRKNLKN---EYIAIECDNI---SQVEE----SLSNNVDMILLDN------MSIS-------EIKKAVDIVNG 250 (300)
T ss_dssp HHHHHHHHHHHSSS---CCEEEEESSH---HHHHH----HHHTTCSEEEEES------CCHH-------HHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCC---CCEEEEECCH---HHHHH----HHHcCCCEEEECC------CCHH-------HHHHHHHhhcC
Confidence 44556666766553 6999999866 44533 5678999997432 4554 33333344567
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.+=+|||| |++.+..|. ..|+ +.|+++++
T Consensus 251 ~v~leaSGGI-t~~~i~~~A-----~tGV-------D~IsvGal 281 (300)
T 3l0g_A 251 KSVLEVSGCV-NIRNVRNIA-----LTGV-------DYISIGCI 281 (300)
T ss_dssp SSEEEEESSC-CTTTHHHHH-----TTTC-------SEEECGGG
T ss_pred ceEEEEECCC-CHHHHHHHH-----HcCC-------CEEEeCcc
Confidence 8999999999 788888888 5888 57776653
No 102
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=95.28 E-value=0.24 Score=44.07 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=44.1
Q ss_pred eEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC---CCC-CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCH
Q psy10250 270 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE---KTN-ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTF 345 (387)
Q Consensus 270 lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~---~~g-at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~ 345 (387)
+++.++. .+.+++. .+.+.|+|||..++.|. ..+ .... .+.++.+++.. ++.|=++|||+ .
T Consensus 109 ~~~~v~~---~t~~e~~----~~~~~g~d~i~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~~--~~pvia~GGI~-~ 173 (215)
T 1xi3_A 109 LIIGASV---YSLEEAL----EAEKKGADYLGAGSVFPTKTKEDARVIG-----LEGLRKIVESV--KIPVVAIGGIN-K 173 (215)
T ss_dssp SEEEEEE---SSHHHHH----HHHHHTCSEEEEECSSCC----CCCCCH-----HHHHHHHHHHC--SSCEEEESSCC-T
T ss_pred CEEEEec---CCHHHHH----HHHhcCCCEEEEcCCccCCCCCCCCCcC-----HHHHHHHHHhC--CCCEEEECCcC-H
Confidence 3444444 2445543 35678999999754331 111 1111 13445555544 57788999999 9
Q ss_pred HHHHHHHHHHHHhcCCC
Q psy10250 346 EDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 346 ~~a~~~i~l~~~~~Ga~ 362 (387)
+++.+++ .+|++
T Consensus 174 ~nv~~~~-----~~Ga~ 185 (215)
T 1xi3_A 174 DNAREVL-----KTGVD 185 (215)
T ss_dssp TTHHHHH-----TTTCS
T ss_pred HHHHHHH-----HcCCC
Confidence 9999988 58884
No 103
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.18 E-value=0.15 Score=46.18 Aligned_cols=60 Identities=17% Similarity=0.139 Sum_probs=40.9
Q ss_pred HHHHHHcCCCEEEc-C--CCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 289 SMTAMFAGSDFIKT-S--TGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 289 ~~ia~~aGaDfVKT-S--TGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++.+.+.|+|||.- + .+....+..+ +.++.+++.. .+.|=++|||++.+++..++ .+|++
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~~~~~~-------~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~-----~~Ga~ 222 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTGLGYDV-------ELIRRVADSV--RIPVIASGGAGRVEHFYEAA-----AAGAD 222 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTCSCCCH-------HHHHHHHHHC--SSCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHhCCCCEEEEecccCCCCcCcCCH-------HHHHHHHHhc--CCCEEEeCCCCCHHHHHHHH-----HcCCc
Confidence 46678889999963 1 1111223333 3455555554 67889999999999999998 48985
No 104
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.17 E-value=0.4 Score=47.06 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=77.4
Q ss_pred HHHHHHHHCCCCeeeeecCchhh-----------hc--------CChhHHHHHHHHHHHHhCCC--cceEEEEee---cc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLV-----------LN--------NQWPELFSEVKQMKEKCGEK--IHMKTILAV---GE 278 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~l-----------k~--------g~~~~v~~Ei~~v~~~~~~~--~~lKvIlEt---~~ 278 (387)
.-|+.|.+.|.|-|++=.-=|+| .. ++...+.+=+++|++++++. +.+|+=.+. +-
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Confidence 44677888999999975211111 11 12345667778888888743 333433311 11
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCC--ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNA--TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~ga--t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
+ +.++....++.+.++ +|||--|.|...... ..+. ...+-++.+++.++ +.|=+.|||+|.++|.+++.
T Consensus 227 ~-~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~--~~~~~~~~ir~~~~--iPVi~~Ggi~t~e~Ae~~l~ 297 (343)
T 3kru_A 227 I-NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPG--YQVKYAETIKKRCN--IKTSAVGLITTQELAEEILS 297 (343)
T ss_dssp C-CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTT--TTHHHHHHHHHHHT--CEEEEESSCCCHHHHHHHHH
T ss_pred c-cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCc--eeehHHHHHHHhcC--cccceeeeeeHHHHHHHHHh
Confidence 2 357777888888899 999999877421100 0110 01234555666653 67888999999999999994
No 105
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=95.07 E-value=0.13 Score=50.30 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=72.7
Q ss_pred HHHHCCCCeeeeecCchhhh-------cCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH-HHcCCC
Q psy10250 227 LLAKQKVDEVDIVIQRSLVL-------NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA-MFAGSD 298 (387)
Q Consensus 227 ~Ai~~GAdEID~Vin~~~lk-------~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia-~~aGaD 298 (387)
.+...+||-|+ +|++--. ..+.+.+.+-+++++++...+..+|+- ..+ ++..+......+ ...+++
T Consensus 150 ~~~~~~ad~ie--lNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~---p~~-~~~~~~~~~~~~~~~~~~~ 223 (354)
T 3tjx_A 150 AVATEKGVILE--LNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMP---PYF-DFAAFDAAAEILNEFPKVQ 223 (354)
T ss_dssp HHHHHHCCEEE--EECC---------CTTSHHHHHHHHHHHHHHCCSCEEEEEC---CCC-SHHHHHHHHHHHHTCTTEE
T ss_pred HhhhcCCCEEE--eeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhcccccccC---CCC-CchhHHHHHHHHHhhcccc
Confidence 34455788655 4554321 224466666667777766544445542 345 444444444444 445777
Q ss_pred EEEcCCCCCC-------------------CCCC-hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 299 FIKTSTGKEK-------------------TNAT-IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 299 fVKTSTGf~~-------------------~gat-~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
.+.+-+++.. +|-+ +..-....+-|+.+++..+ .+-|=..|||.|.+||.+++ .
T Consensus 224 ~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~-~~pIIg~GGI~s~~Da~e~i-----~ 297 (354)
T 3tjx_A 224 FITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCP-GKLIFGCGGVYTGEDAFLHV-----L 297 (354)
T ss_dssp EEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHH-----H
T ss_pred hhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcC-CCcEEEeCCcCCHHHHHHHH-----H
Confidence 7776554311 0101 1111222344555555543 45677899999999999999 5
Q ss_pred cCCCccCCCcceeecc
Q psy10250 359 LGPDWLNKDLFRIGAS 374 (387)
Q Consensus 359 ~Ga~w~~~~~~RIGtS 374 (387)
+||+ ..=|||.
T Consensus 298 aGAs-----~Vqv~Ta 308 (354)
T 3tjx_A 298 AGAS-----MVQVGTA 308 (354)
T ss_dssp HTEE-----EEEECHH
T ss_pred cCCC-----EEEEChh
Confidence 8985 3446654
No 106
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=95.04 E-value=0.12 Score=48.84 Aligned_cols=116 Identities=13% Similarity=0.171 Sum_probs=75.4
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc-CCCEEEc
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-GSDFIKT 302 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a-GaDfVKT 302 (387)
++.+|...|||-|=+ +...+.. ++++.+.+.++. .-+.+++|+. +.++. +.|.+. |+|+|=+
T Consensus 115 qi~ea~~~GAD~ilL--i~a~l~~-------~~l~~l~~~a~~-lGl~~lvEv~---~~eE~----~~A~~l~g~~iIGi 177 (251)
T 1i4n_A 115 QVKLASSVGADAILI--IARILTA-------EQIKEIYEAAEE-LGMDSLVEVH---SREDL----EKVFSVIRPKIIGI 177 (251)
T ss_dssp HHHHHHHTTCSEEEE--EGGGSCH-------HHHHHHHHHHHT-TTCEEEEEEC---SHHHH----HHHHTTCCCSEEEE
T ss_pred HHHHHHHcCCCEEEE--ecccCCH-------HHHHHHHHHHHH-cCCeEEEEeC---CHHHH----HHHHhcCCCCEEEE
Confidence 466688999998533 3332221 567777777765 4689999998 44554 446778 9999954
Q ss_pred -CCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 303 -STGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 303 -STGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
..++...+..++ ....+.+..+..+-+=+-|||+|.+|+..+.. + + +.+-+|++
T Consensus 178 nnr~l~t~~~d~~-------~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~-----~-a-----~avLVG~a 232 (251)
T 1i4n_A 178 NTRDLDTFEIKKN-------VLWELLPLVPDDTVVVAESGIKDPRELKDLRG-----K-V-----NAVLVGTS 232 (251)
T ss_dssp ECBCTTTCCBCTT-------HHHHHGGGSCTTSEEEEESCCCCGGGHHHHTT-----T-C-----SEEEECHH
T ss_pred eCcccccCCCCHH-------HHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHH-----h-C-----CEEEEcHH
Confidence 445433344443 22233344555554555789999999999983 4 4 36888876
No 107
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.04 E-value=0.075 Score=49.71 Aligned_cols=149 Identities=16% Similarity=0.165 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC---CccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHH
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY---PARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLE 219 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e 219 (387)
.+.++...+++.+. +-|+..+=|. |......++.-+.. .++.+.+ |+-.+
T Consensus 43 ~~~~~a~~~a~al~----------------~gGi~~iEvt~~t~~a~e~I~~l~~~~---~~~~iGa-------GTVlt- 95 (232)
T 4e38_A 43 DNAEDIIPLGKVLA----------------ENGLPAAEITFRSDAAVEAIRLLRQAQ---PEMLIGA-------GTILN- 95 (232)
T ss_dssp SSGGGHHHHHHHHH----------------HTTCCEEEEETTSTTHHHHHHHHHHHC---TTCEEEE-------ECCCS-
T ss_pred CCHHHHHHHHHHHH----------------HCCCCEEEEeCCCCCHHHHHHHHHHhC---CCCEEeE-------CCcCC-
Confidence 35567777777777 5677777774 44444333322211 1222211 22222
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCE
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 299 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDf 299 (387)
..+++.|++.||+=| +- ...+ .|+. +.|.. .-+.+|-- .. |++|+.+| .++|+||
T Consensus 96 --~~~a~~Ai~AGA~fI---vs------P~~~---~~vi---~~~~~-~gi~~ipG--v~-TptEi~~A----~~~Gad~ 150 (232)
T 4e38_A 96 --GEQALAAKEAGATFV---VS------PGFN---PNTV---RACQE-IGIDIVPG--VN-NPSTVEAA----LEMGLTT 150 (232)
T ss_dssp --HHHHHHHHHHTCSEE---EC------SSCC---HHHH---HHHHH-HTCEEECE--EC-SHHHHHHH----HHTTCCE
T ss_pred --HHHHHHHHHcCCCEE---Ee------CCCC---HHHH---HHHHH-cCCCEEcC--CC-CHHHHHHH----HHcCCCE
Confidence 788999999999865 21 2221 2222 22322 12455553 34 77888654 7899999
Q ss_pred EEcCCCCCCCCCC--hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 300 IKTSTGKEKTNAT--IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 300 VKTSTGf~~~gat--~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
||. | |.++. + +-++.++.-. +.+.+=+.|||. .+++..|+ .+|+
T Consensus 151 vK~---F-Pa~~~gG~-------~~lkal~~p~-p~ip~~ptGGI~-~~n~~~~l-----~aGa 196 (232)
T 4e38_A 151 LKF---F-PAEASGGI-------SMVKSLVGPY-GDIRLMPTGGIT-PSNIDNYL-----AIPQ 196 (232)
T ss_dssp EEE---C-STTTTTHH-------HHHHHHHTTC-TTCEEEEBSSCC-TTTHHHHH-----TSTT
T ss_pred EEE---C-cCccccCH-------HHHHHHHHHh-cCCCeeeEcCCC-HHHHHHHH-----HCCC
Confidence 998 3 22221 2 2345554433 368899999995 89999999 5887
No 108
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=95.00 E-value=0.12 Score=46.17 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=62.5
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
.++.|.+.|||-+=+-...+ .+++.++++.++. .-+++-+...-++++++.. +.+.+.|+||||..
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~----------~~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~---~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSAD----------DSTIAGAVKAAQA-HNKGVVVDLIGIEDKATRA---QEVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSC----------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHH---HHHHHTTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEeccCC----------hHHHHHHHHHHHH-cCCceEEEEecCCChHHHH---HHHHHhCCCEEEEE
Confidence 45788999998764322221 1234445555532 1133434333232445522 22345699999887
Q ss_pred CCCCC--CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 304 TGKEK--TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 304 TGf~~--~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
.|+.+ .|..+.. +.|+.+.+. .+.|=+.|||+ .+++.+++ .+|+++
T Consensus 135 ~~~~~~~~g~~~~~-----~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~-----~aGad~ 182 (207)
T 3ajx_A 135 AGLDEQAKPGFDLN-----GLLAAGEKA---RVPFSVAGGVK-VATIPAVQ-----KAGAEV 182 (207)
T ss_dssp CCHHHHTSTTCCTH-----HHHHHHHHH---TSCEEEESSCC-GGGHHHHH-----HTTCSE
T ss_pred ecccccccCCCchH-----HHHHHhhCC---CCCEEEECCcC-HHHHHHHH-----HcCCCE
Confidence 66642 3333321 234444332 56788999999 77888888 589863
No 109
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=94.97 E-value=0.27 Score=48.85 Aligned_cols=127 Identities=9% Similarity=0.035 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhh----h-------cC--------ChhHHHHHHHHHHHHhCC-CcceEEEEee--
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLV----L-------NN--------QWPELFSEVKQMKEKCGE-KIHMKTILAV-- 276 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~l----k-------~g--------~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt-- 276 (387)
+.=+..|+.|.+.|+|-||+=.-=|+| + .. +...+.+=+++|+++++. ++.+|+=...
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 344566778889999999974322211 1 11 223455667888888874 2334431110
Q ss_pred ----ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 277 ----GELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 277 ----~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
.-. +.++....++.+.++|+|||--|.|.......... .+.++.+++.+ ++.|=+.||| +.++|.+++
T Consensus 246 ~~~~~~~-~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~----~~~~~~ik~~~--~iPvi~~Ggi-~~~~a~~~l 317 (377)
T 2r14_A 246 FGLTDDE-PEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYP----EGFREQMRQRF--KGGLIYCGNY-DAGRAQARL 317 (377)
T ss_dssp TTCCCSC-HHHHHHHHHHHHHHTTCSEEEEECCC------CCC----TTHHHHHHHHC--CSEEEEESSC-CHHHHHHHH
T ss_pred CCCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcch----HHHHHHHHHHC--CCCEEEECCC-CHHHHHHHH
Confidence 012 34666778888999999999988874211110000 12355566665 3568889999 799999999
Q ss_pred H
Q psy10250 353 Y 353 (387)
Q Consensus 353 ~ 353 (387)
.
T Consensus 318 ~ 318 (377)
T 2r14_A 318 D 318 (377)
T ss_dssp H
T ss_pred H
Confidence 4
No 110
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.93 E-value=0.064 Score=49.73 Aligned_cols=152 Identities=15% Similarity=0.151 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC---CccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHH
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY---PARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLE 219 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e 219 (387)
.+.++...+++... +-|+..+=|. |......+++-+.. .+..|. + |+-.
T Consensus 22 ~~~~~a~~~a~al~----------------~gGi~~iEvt~~t~~a~~~I~~l~~~~---p~~~IG-A------GTVl-- 73 (217)
T 3lab_A 22 DDLVHAIPMAKALV----------------AGGVHLLEVTLRTEAGLAAISAIKKAV---PEAIVG-A------GTVC-- 73 (217)
T ss_dssp SCGGGHHHHHHHHH----------------HTTCCEEEEETTSTTHHHHHHHHHHHC---TTSEEE-E------ECCC--
T ss_pred CCHHHHHHHHHHHH----------------HcCCCEEEEeCCCccHHHHHHHHHHHC---CCCeEe-e------cccc--
Confidence 35566667776666 4566777663 44444444332221 122221 1 2222
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcce-----EEEEeeccCCChHHHHHHHHHHHH
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHM-----KTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~l-----KvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
-..+++.|++.||+=| +..+. ..|+ .+.|+. .-+ -.++- +.. |++|+.+ |.+
T Consensus 74 -t~~~a~~ai~AGA~fi-vsP~~-----------~~ev---i~~~~~-~~v~~~~~~~~~P-G~~-TptE~~~----A~~ 130 (217)
T 3lab_A 74 -TADDFQKAIDAGAQFI-VSPGL-----------TPEL---IEKAKQ-VKLDGQWQGVFLP-GVA-TASEVMI----AAQ 130 (217)
T ss_dssp -SHHHHHHHHHHTCSEE-EESSC-----------CHHH---HHHHHH-HHHHCSCCCEEEE-EEC-SHHHHHH----HHH
T ss_pred -CHHHHHHHHHcCCCEE-EeCCC-----------cHHH---HHHHHH-cCCCccCCCeEeC-CCC-CHHHHHH----HHH
Confidence 2778999999999876 33332 1122 223322 112 01232 445 7788865 488
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
+|+|+||..-+-..+| + .-++.++.-. +.+.+-+.|||. .+++..|+ .+|+
T Consensus 131 ~Gad~vK~FPa~~~gG--~-------~~lkal~~p~-p~i~~~ptGGI~-~~N~~~~l-----~aGa 181 (217)
T 3lab_A 131 AGITQLKCFPASAIGG--A-------KLLKAWSGPF-PDIQFCPTGGIS-KDNYKEYL-----GLPN 181 (217)
T ss_dssp TTCCEEEETTTTTTTH--H-------HHHHHHHTTC-TTCEEEEBSSCC-TTTHHHHH-----HSTT
T ss_pred cCCCEEEECccccccC--H-------HHHHHHHhhh-cCceEEEeCCCC-HHHHHHHH-----HCCC
Confidence 9999999743311111 2 2455555544 468999999998 78999999 4887
No 111
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=94.90 E-value=0.52 Score=45.99 Aligned_cols=203 Identities=12% Similarity=0.135 Sum_probs=121.1
Q ss_pred hccccccc------CCCCCCHHHHHHHHH-HhcCCCcHHHHHHHhhhccCCCeEEEEE-----CC---ccHHHHHHHhhh
Q psy10250 131 IEFIDLTT------LSGDDTEAVVETLTL-KAIQPLSEELKEKVLHQQANVHTAAVCV-----YP---ARVVDVIKVLDR 195 (387)
Q Consensus 131 ~~~ID~T~------L~~~~T~~~i~~l~~-~A~~~~~~~~~~~~~~~~~~~~~~aVcV-----~P---~~v~~a~~~L~~ 195 (387)
+..+|-|+ +....+.++..++++ .-. +.|+..+=+ +| .+++..++....
T Consensus 20 v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~----------------~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~ 83 (337)
T 3ble_A 20 LEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQ----------------KLNVDRVEIASARVSKGELETVQKIMEWAAT 83 (337)
T ss_dssp CEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHH----------------TTCCSEEEEEETTSCTTHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHH----------------HcCCCEEEEeCCCCChhHHHHHHHHHhhhhh
Confidence 34555553 344578888888887 554 455555544 45 466666653110
Q ss_pred cCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCC-Ccc
Q psy10250 196 ENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIH 269 (387)
Q Consensus 196 ~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~-~~~ 269 (387)
...-.++++++.+ | +. | .++.|++.|+++|.+.+..+.. .....++..+.+..+++.++. +..
T Consensus 84 ~~~~~~~~i~~l~---~-~~-----~--~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~ 152 (337)
T 3ble_A 84 EQLTERIEILGFV---D-GN-----K--TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK 152 (337)
T ss_dssp TTCGGGEEEEEES---S-TT-----H--HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred hccCCCCeEEEEc---c-ch-----h--hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE
Confidence 0001245665553 2 11 2 7899999999999999865543 234567777788777777643 345
Q ss_pred eEEEEee---ccCCChHHHHHHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcC-CCceEeEe--cc
Q psy10250 270 MKTILAV---GELKTSENIYCASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSG-KKIGLKPA--GG 341 (387)
Q Consensus 270 lKvIlEt---~~L~t~e~i~~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~-~~~gIKas--GG 341 (387)
+-+=+|. ..-.+++.+.+.++.+.++|+|.| +-+.|. ++|..+..+++.+ ++.++ -.+++..= -|
T Consensus 153 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~----~~P~~v~~lv~~l---~~~~p~~~i~~H~Hnd~G 225 (337)
T 3ble_A 153 INVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGV----LSPEETFQGVDSL---IQKYPDIHFEFHGHNDYD 225 (337)
T ss_dssp EEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCC----CCHHHHHHHHHHH---HHHCTTSCEEEECBCTTS
T ss_pred EEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCC----cCHHHHHHHHHHH---HHhcCCCeEEEEecCCcc
Confidence 5555655 323356778889999999999975 546665 6788777665444 45553 34444431 12
Q ss_pred CCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 342 ISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 342 Irt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
--. ..++.-+ ++|+++++....=+|-
T Consensus 226 lA~-AN~laAv-----~aGa~~vd~tv~GlG~ 251 (337)
T 3ble_A 226 LSV-ANSLQAI-----RAGVKGLHASINGLGE 251 (337)
T ss_dssp CHH-HHHHHHH-----HTTCSEEEEBGGGCSS
T ss_pred hHH-HHHHHHH-----HhCCCEEEEecccccc
Confidence 222 2223333 5899877766666664
No 112
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.74 E-value=0.56 Score=45.78 Aligned_cols=145 Identities=16% Similarity=0.165 Sum_probs=88.4
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEEeecc
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGE 278 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~ 278 (387)
.+++++.. ++| |... ..-++.|.+.|++.+-+....+.+ + ++..+++.+.. +..+-+-+|.+.
T Consensus 81 ~~~~i~~l--~~p-~~~~----~~~i~~a~~aGvd~v~I~~~~s~~-----~----~~~~~i~~ak~~G~~v~~~~~~a~ 144 (345)
T 1nvm_A 81 SHAQIATL--LLP-GIGS----VHDLKNAYQAGARVVRVATHCTEA-----D----VSKQHIEYARNLGMDTVGFLMMSH 144 (345)
T ss_dssp SSSEEEEE--ECB-TTBC----HHHHHHHHHHTCCEEEEEEETTCG-----G----GGHHHHHHHHHHTCEEEEEEESTT
T ss_pred CCCEEEEE--ecC-Cccc----HHHHHHHHhCCcCEEEEEEeccHH-----H----HHHHHHHHHHHCCCEEEEEEEeCC
Confidence 46777655 467 4433 346788888999999887655432 2 33334444432 245667777787
Q ss_pred CCChHHHHHHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCc--eEeEe--ccCCCHHHHHHHH
Q psy10250 279 LKTSENIYCASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKI--GLKPA--GGISTFEDSVRWI 352 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~--gIKas--GGIrt~~~a~~~i 352 (387)
-.+++.+.+.++.+.+.|++.| +=+||. .+|+.+..+++. +++.+++.+ ++..= -|--. ..++.-+
T Consensus 145 ~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~----~~P~~v~~lv~~---l~~~~~~~~pi~~H~Hn~~G~av-An~laA~ 216 (345)
T 1nvm_A 145 MIPAEKLAEQGKLMESYGATCIYMADSGGA----MSMNDIRDRMRA---FKAVLKPETQVGMHAHHNLSLGV-ANSIVAV 216 (345)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECTTCC----CCHHHHHHHHHH---HHHHSCTTSEEEEECBCTTSCHH-HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCc----cCHHHHHHHHHH---HHHhcCCCceEEEEECCCccHHH-HHHHHHH
Confidence 7677889999999999999965 446775 467776665544 455564333 22220 02221 2222223
Q ss_pred HHHHHhcCCCccCCCcceeec
Q psy10250 353 YLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 353 ~l~~~~~Ga~w~~~~~~RIGt 373 (387)
++|++|++....=+|-
T Consensus 217 -----~aGa~~vd~tv~GlG~ 232 (345)
T 1nvm_A 217 -----EEGCDRVDASLAGMGA 232 (345)
T ss_dssp -----HTTCCEEEEBGGGCSS
T ss_pred -----HcCCCEEEecchhccC
Confidence 5899887776666665
No 113
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=94.71 E-value=1.7 Score=42.40 Aligned_cols=154 Identities=10% Similarity=0.022 Sum_probs=103.8
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++-+. +++. ..+.+.-..+++.+.+.|.+-|.+ +.+. ++.+...+=+++|++++++. +.+.+....--
T Consensus 133 ~v~~y~~-~~~~--~~~~e~~~~~a~~~~~~Gf~~iKi--k~g~---~~~~~~~e~v~avr~a~G~d--~~l~vDan~~~ 202 (371)
T 2ovl_A 133 VVPVYAG-GIDL--ELPVADLKTQADRFLAGGFRAIKM--KVGR---PDLKEDVDRVSALREHLGDS--FPLMVDANMKW 202 (371)
T ss_dssp EEEEEEE-CCBT--TSCHHHHHHHHHHHHHTTCSCEEE--ECCC---SSHHHHHHHHHHHHHHHCTT--SCEEEECTTCS
T ss_pred CeeEEEe-CCCc--CCCHHHHHHHHHHHHHcCCCEEEE--CCCC---CCHHHHHHHHHHHHHHhCCC--CeEEEECCCCC
Confidence 4554444 2332 235677778899999999999985 3331 35566677788889988753 34455553222
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
+.++..+.++...+.|++||--+... ... +..+.+++.+ ++.|=+-+.+.|.+++..++. .-+
T Consensus 203 ~~~~a~~~~~~l~~~~i~~iEqP~~~----~d~-------~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~----~~~ 265 (371)
T 2ovl_A 203 TVDGAIRAARALAPFDLHWIEEPTIP----DDL-------VGNARIVRES--GHTIAGGENLHTLYDFHNAVR----AGS 265 (371)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCT----TCH-------HHHHHHHHHH--CSCEEECTTCCSHHHHHHHHH----HTC
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCc----ccH-------HHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHH----cCC
Confidence 56777777888888999999865421 122 3455555554 477878888999999999995 455
Q ss_pred CCccCCCcceeec-cchHHHHH
Q psy10250 361 PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 361 a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
++.++++..++|. +..+++..
T Consensus 266 ~d~v~ik~~~~GGi~~~~~i~~ 287 (371)
T 2ovl_A 266 LTLPEPDVSNIGGYTTFRKVAA 287 (371)
T ss_dssp CSEECCCTTTTTSHHHHHHHHH
T ss_pred CCEEeeCccccCCHHHHHHHHH
Confidence 7888999999965 45555543
No 114
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=94.58 E-value=0.13 Score=49.62 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+-+++.++..+ ..|+.+|+.-| +|..+ |+++|+|+|.=-+ .+++ +++...+...+
T Consensus 185 i~~Av~~ar~~~~---~~~IeVEv~tl---~ea~e----Al~aGaD~I~LDn------~~~~-------~l~~av~~~~~ 241 (287)
T 3tqv_A 185 IAKAVTKAKKLDS---NKVVEVEVTNL---DELNQ----AIAAKADIVMLDN------FSGE-------DIDIAVSIARG 241 (287)
T ss_dssp HHHHHHHHHHHCT---TSCEEEEESSH---HHHHH----HHHTTCSEEEEES------CCHH-------HHHHHHHHHTT
T ss_pred HHHHHHHHHhhCC---CCcEEEEeCCH---HHHHH----HHHcCCCEEEEcC------CCHH-------HHHHHHHhhcC
Confidence 4455556665543 36899999866 44533 5678999998544 3454 34444444567
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.+=+|||| |++.+.+|. ..|+ +.|+++++
T Consensus 242 ~v~ieaSGGI-t~~~i~~~a-----~tGV-------D~IsvGal 272 (287)
T 3tqv_A 242 KVALEVSGNI-DRNSIVAIA-----KTGV-------DFISVGAI 272 (287)
T ss_dssp TCEEEEESSC-CTTTHHHHH-----TTTC-------SEEECSHH
T ss_pred CceEEEECCC-CHHHHHHHH-----HcCC-------CEEEEChh
Confidence 8999999999 788888888 5888 57777654
No 115
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=94.41 E-value=0.034 Score=50.69 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=63.9
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee-ccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV-GELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt-~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.++.+.+.|||-|=+..-- + .+.+.++++.++. .-++++++. +-+ |.+++..+ .+.|+||+.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~-----~-----~~~~~~~~~~~~~-~g~~~~~d~l~~~-T~~~~~~~----~~~g~d~v~~ 138 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAA-----H-----IATIAACKKVADE-LNGEIQIEIYGNW-TMQDAKAW----VDLGITQAIY 138 (218)
T ss_dssp HHHHHHHHTCSEEEEETTS-----C-----HHHHHHHHHHHHH-HTCEEEEECCSSC-CHHHHHHH----HHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEEecCC-----C-----HHHHHHHHHHHHH-hCCccceeeeecC-CHHHHHHH----HHcCccceee
Confidence 6688999999875443211 1 1223444444432 124665432 224 55555444 3459999987
Q ss_pred CCCCCCC--CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 STGKEKT--NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 STGf~~~--gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+|+.+. |... .-+.++.+++..+..+.|=+-|||+ .+++..++ .+|++
T Consensus 139 ~~~~~~~~~g~~~-----~~~~l~~i~~~~~~~~pi~v~GGI~-~~~~~~~~-----~aGAd 189 (218)
T 3jr2_A 139 HRSRDAELAGIGW-----TTDDLDKMRQLSALGIELSITGGIV-PEDIYLFE-----GIKTK 189 (218)
T ss_dssp ECCHHHHHHTCCS-----CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGT-----TSCEE
T ss_pred eeccccccCCCcC-----CHHHHHHHHHHhCCCCCEEEECCCC-HHHHHHHH-----HcCCC
Confidence 6664321 2211 1123444454444568889999995 88888888 58885
No 116
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=94.40 E-value=2.3 Score=40.89 Aligned_cols=192 Identities=15% Similarity=0.091 Sum_probs=114.3
Q ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE----CCccHH---HHHHHhhhcCCCCCceEEEEecCCCC
Q psy10250 141 GDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV----YPARVV---DVIKVLDRENARDDVKVASVAAGFPS 213 (387)
Q Consensus 141 ~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV----~P~~v~---~a~~~L~~~~~~~~v~v~tVvigFP~ 213 (387)
...+.++..++++... +.|+..+=+ +|.+++ ...+.++......++++++. + |.
T Consensus 23 ~~~~~e~k~~i~~~L~----------------~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l-~--~~ 83 (307)
T 1ydo_A 23 VWIATEDKITWINQLS----------------RTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAAL-V--PN 83 (307)
T ss_dssp SCCCHHHHHHHHHHHH----------------TTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEE-C--CS
T ss_pred CCCCHHHHHHHHHHHH----------------HcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEE-e--CC
Confidence 3457788888777766 456655544 454443 22222222111246777666 3 41
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCC-CcceEEEEeeccC------CC
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGEL------KT 281 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L------~t 281 (387)
...++.|++.|++.|.+++..+.. .....++..+.+..+++.++. +..+.+-|.+.+- .+
T Consensus 84 --------~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~ 155 (307)
T 1ydo_A 84 --------QRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVP 155 (307)
T ss_dssp --------HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCC
T ss_pred --------HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCC
Confidence 346888999999999999876543 233567777888888777753 2344444444221 25
Q ss_pred hHHHHHHHHHHHHcCCCE--EEcCCCCCCCCCChhhhHhHHHHHHHHHHHcC-CCceEeE--eccCCCHHHHHHHHHHHH
Q psy10250 282 SENIYCASMTAMFAGSDF--IKTSTGKEKTNATIPAGIIMCSAIKHFHKLSG-KKIGLKP--AGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDf--VKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~-~~~gIKa--sGGIrt~~~a~~~i~l~~ 356 (387)
++.+.+.++.+.++|+|- ++-+.|. ++|..+..+++.+ ++..+ -.+++-. --|.-..+ ++.-+
T Consensus 156 ~~~~~~~~~~~~~~Ga~~i~l~DT~G~----~~P~~v~~lv~~l---~~~~~~~~l~~H~Hnd~Gla~AN-~laAv---- 223 (307)
T 1ydo_A 156 IEQVIRLSEALFEFGISELSLGDTIGA----ANPAQVETVLEAL---LARFPANQIALHFHDTRGTALAN-MVTAL---- 223 (307)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECSSCC----CCHHHHHHHHHHH---HTTSCGGGEEEECBGGGSCHHHH-HHHHH----
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC----cCHHHHHHHHHHH---HHhCCCCeEEEEECCCCchHHHH-HHHHH----
Confidence 788889999999999995 5556664 6788766665444 44443 2344443 12322222 23333
Q ss_pred HhcCCCccCCCcceee
Q psy10250 357 IMLGPDWLNKDLFRIG 372 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIG 372 (387)
++|++|++....=+|
T Consensus 224 -~aGa~~vd~tv~GlG 238 (307)
T 1ydo_A 224 -QMGITVFDGSAGGLG 238 (307)
T ss_dssp -HHTCCEEEEBGGGCC
T ss_pred -HhCCCEEEEcccccC
Confidence 589988877766454
No 117
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=94.36 E-value=0.16 Score=48.90 Aligned_cols=175 Identities=13% Similarity=0.102 Sum_probs=100.7
Q ss_pred ccCCCCC-CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCcc-------HHHHHHHhhhcCCCCCceEEEEe
Q psy10250 137 TTLSGDD-TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPAR-------VVDVIKVLDRENARDDVKVASVA 208 (387)
Q Consensus 137 T~L~~~~-T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~-------v~~a~~~L~~~~~~~~v~v~tVv 208 (387)
++|.|+- ..++..+..+++. +.|+.++.|-..- +....+.++.. +++.+ +
T Consensus 43 ~liDPdK~~~~~~~~~~~~~~----------------~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~---~~lPv--i- 100 (286)
T 3vk5_A 43 HIIDPFKVPVTEAVEKAAELT----------------RLGFAAVLLASTDYESFESHMEPYVAAVKAA---TPLPV--V- 100 (286)
T ss_dssp EEECTTTSCHHHHHHHHHHHH----------------HTTCSCEEEECSCCSSHHHHHHHHHHHHHHH---CSSCE--E-
T ss_pred EEECCCCCCcHHHHHHHHHHH----------------hcCCCEEEEccCCCCcchHHHHHHHHHHHHh---CCCCE--E-
Confidence 3666765 4566556666665 4577778877321 23334444431 45554 3
Q ss_pred cCCC---CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHH--hC-CCcceEEEEeeccC---
Q psy10250 209 AGFP---SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEK--CG-EKIHMKTILAVGEL--- 279 (387)
Q Consensus 209 igFP---~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~--~~-~~~~lKvIlEt~~L--- 279 (387)
.=|| ...... ..||| .++=.+.|.++|..++..-+.....+ .+ +.....=+|-++||
T Consensus 101 l~fPP~~g~~~~i-----------~~~aD---a~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~ 166 (286)
T 3vk5_A 101 LHFPPRPGAGFPV-----------VRGAD---ALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFG 166 (286)
T ss_dssp EECCCBTTTBSCC-----------CTTCS---EEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECS
T ss_pred EECCCCCCCcccc-----------ccCCC---EEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEEC
Confidence 2389 444333 34555 44445667788888876653332211 10 00011122223332
Q ss_pred --------------CChHHH---HHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccC
Q psy10250 280 --------------KTSENI---YCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGI 342 (387)
Q Consensus 280 --------------~t~e~i---~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGI 342 (387)
.+. ++ ..-++.+.+.|.++|-.-.+. ....+ +.|+.+++.++..+.|-+-|||
T Consensus 167 ~g~k~V~fv~~~~~~~~-e~A~~~aYa~~gad~G~~lV~LD~~~--~~v~~-------e~V~~I~~~~~~~iPV~vGGGI 236 (286)
T 3vk5_A 167 EDPRTGDLLGTVPVSTA-STEEIDRYLHVARAFGFHMVYLYSRN--EHVPP-------EVVRHFRKGLGPDQVLFVSGNV 236 (286)
T ss_dssp CCHHHHHHHCBCCCCCS-SSHHHHHHHHHHHHTTCSEEEEECSS--SCCCH-------HHHHHHHHHSCTTCEEEEESSC
T ss_pred CCCceeeeeCCCCCCCH-HHHHHHHHHHHHHHcCCCEEEEcCCC--CcCCH-------HHHHHHHHhcCCCCCEEEEeCC
Confidence 122 33 455677788899999886443 34444 3566667766547889999999
Q ss_pred CCHHHHHHHHHHHHHhcCCC
Q psy10250 343 STFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 343 rt~~~a~~~i~l~~~~~Ga~ 362 (387)
||.+|+.+++ .+|++
T Consensus 237 rs~Eda~~ll-----~aGAD 251 (286)
T 3vk5_A 237 RSGRQVTEYL-----DSGAD 251 (286)
T ss_dssp CSHHHHHHHH-----HTTCS
T ss_pred CCHHHHHHHH-----HcCCC
Confidence 9999999999 58984
No 118
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=94.36 E-value=0.73 Score=45.58 Aligned_cols=117 Identities=11% Similarity=0.039 Sum_probs=73.8
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh----cC---------------ChhHHHHHHHHHHHHhCC-CcceEEEEeec--cC-
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGE-KIHMKTILAVG--EL- 279 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk----~g---------------~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~--~L- 279 (387)
..|+.|.+.|.|-|++=.-=|+|. |- +...+.+=+++|++++++ ++.+|+=.... -+
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 346788899999999864432222 11 223556677888888875 22333321100 01
Q ss_pred --CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 280 --KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 280 --~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
.+.++....++.+.++|+|||--|.|. .+. + .++.+++.++ +.|=+.||| |.++|.+++.
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~--~-------~~~~ik~~~~--iPvi~~Ggi-t~e~a~~~l~ 298 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRERE--ADD--S-------IGPLIKEAFG--GPYIVNERF-DKASANAALA 298 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECCC--CTT--C-------CHHHHHHHHC--SCEEEESSC-CHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECCCC--CCH--H-------HHHHHHHHCC--CCEEEeCCC-CHHHHHHHHH
Confidence 113456778888999999999988875 121 2 1334455553 457789999 9999999994
No 119
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=94.24 E-value=3.9 Score=38.85 Aligned_cols=131 Identities=13% Similarity=0.075 Sum_probs=80.1
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igFP~-G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
+|.|+ |..+.+.-..-++.+.+.||+.|-+.=-.|. .....+++-++.+++..++ .+ |+...=++...-..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~-~~----i~~H~Hn~~Gla~A 216 (298)
T 2cw6_A 145 LGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGV---GTPGIMKDMLSAVMQEVPL-AA----LAVHCHDTYGQALA 216 (298)
T ss_dssp TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHSCG-GG----EEEEEBCTTSCHHH
T ss_pred eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCC-Ce----EEEEECCCCchHHH
Confidence 35575 4556676666788889999999877744553 4578888888888887643 22 34333323222223
Q ss_pred HHHHHHHcCCCEEEcCC-CCCC--------CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 288 ASMTAMFAGSDFIKTST-GKEK--------TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 288 a~~ia~~aGaDfVKTST-Gf~~--------~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
-+..|+++|+++|-+|- |.|. +++..|.+..++ +..+... || +++.....-.++.+.
T Consensus 217 n~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l-------~~~g~~~------~i-dl~~l~~~~~~~~~~ 282 (298)
T 2cw6_A 217 NTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYML-------EGLGIHT------GV-NLQKLLEAGNFICQA 282 (298)
T ss_dssp HHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHH-------HHHTCBC------CC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHH-------HhcCCCC------Cc-CHHHHHHHHHHHHHH
Confidence 35778999999999865 4543 456565433332 1223232 33 466666666666667
Q ss_pred cCC
Q psy10250 359 LGP 361 (387)
Q Consensus 359 ~Ga 361 (387)
.|.
T Consensus 283 ~~~ 285 (298)
T 2cw6_A 283 LNR 285 (298)
T ss_dssp TTC
T ss_pred HCC
Confidence 774
No 120
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=94.23 E-value=0.54 Score=46.51 Aligned_cols=117 Identities=8% Similarity=0.002 Sum_probs=74.6
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh----c-------C--------ChhHHHHHHHHHHHHhCC-CcceEEEEeec--cC-
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL----N-------N--------QWPELFSEVKQMKEKCGE-KIHMKTILAVG--EL- 279 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk----~-------g--------~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~--~L- 279 (387)
..|+.|.+.|.|-|++=.-=|+|. | . +...+.+=+++|++++++ ++.+|+=.... -+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 447788899999999865432222 1 1 234566777888888875 22333322110 01
Q ss_pred --CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 280 --KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 280 --~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
.+.++....++.+.++|+|||-.|.|.. +. + .++.+++.++ +.|=+.||| |.++|.+++.
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~~--~-------~~~~ik~~~~--iPvi~~Ggi-t~e~a~~~l~ 306 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARESFG--GD--A-------IGQQLKAAFG--GPFIVNENF-TLDSAQAALD 306 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCCS--TT--C-------CHHHHHHHHC--SCEEEESSC-CHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCCCC--CH--H-------HHHHHHHHcC--CCEEEeCCC-CHHHHHHHHH
Confidence 0135567788889999999999888752 21 2 1334455553 457789999 9999999994
No 121
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.22 E-value=0.44 Score=45.41 Aligned_cols=129 Identities=15% Similarity=0.097 Sum_probs=68.4
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..-++.+.+.|+|-+=+ +++.. +|...+++.++. .-++.|+=.+--++++.+. +++.. +.+||=
T Consensus 115 ~~f~~~~~~aGvdGvIi-pDlp~----------ee~~~~~~~~~~-~gl~~I~lvap~t~~eri~---~i~~~-~~gfiY 178 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLI-ADVPT----------NESQPFVAAAEK-FGIQPIFIAPPTASDETLR---AVAQL-GKGYTY 178 (271)
T ss_dssp HHHHHHHHHHTCCEEEE-TTSCG----------GGCHHHHHHHHH-TTCEEEEEECTTCCHHHHH---HHHHH-CCSCEE
T ss_pred HHHHHHHHHCCCCEEEE-CCCCH----------HHHHHHHHHHHH-cCCeEEEEECCCCCHHHHH---HHHHH-CCCeEE
Confidence 34578888888888644 34432 345556666543 2355554333332444333 33333 566666
Q ss_pred c--CCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchHH
Q psy10250 302 T--STGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLN 378 (387)
Q Consensus 302 T--STGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~~ 378 (387)
+ ++|...... ..+.+ .+-++.+++.+ ++.|=+-|||+|.+|+.+.+ ..|+| ..-+| |..++
T Consensus 179 ~vs~~GvTG~~~~~~~~~---~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~-----~~gAD-----gvIVG-SAiv~ 242 (271)
T 3nav_A 179 LLSRAGVTGAETKANMPV---HALLERLQQFD--APPALLGFGISEPAQVKQAI-----EAGAA-----GAISG-SAVVK 242 (271)
T ss_dssp ECCCC--------CCHHH---HHHHHHHHHTT--CCCEEECSSCCSHHHHHHHH-----HTTCS-----EEEES-HHHHH
T ss_pred EEeccCCCCcccCCchhH---HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----HcCCC-----EEEEC-HHHHH
Confidence 5 545422111 12222 23455555554 45666789999999999666 47875 33444 55555
Q ss_pred HHHH
Q psy10250 379 NILQ 382 (387)
Q Consensus 379 il~~ 382 (387)
.+.+
T Consensus 243 ~i~~ 246 (271)
T 3nav_A 243 IIET 246 (271)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 122
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.97 E-value=0.13 Score=47.53 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=64.2
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHH-HHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEV-KQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei-~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
.+++.|++.|||-+ + ++..+ .++ +..++ .+ ..+|+- -. |++++.+ |.+.|+||||
T Consensus 80 d~~~~A~~aGAd~v--~-------~p~~d---~~v~~~ar~-~g----~~~i~G--v~-t~~e~~~----A~~~Gad~vk 135 (224)
T 1vhc_A 80 EQVVLAKSSGADFV--V-------TPGLN---PKIVKLCQD-LN----FPITPG--VN-NPMAIEI----ALEMGISAVK 135 (224)
T ss_dssp HHHHHHHHHTCSEE--E-------CSSCC---HHHHHHHHH-TT----CCEECE--EC-SHHHHHH----HHHTTCCEEE
T ss_pred HHHHHHHHCCCCEE--E-------ECCCC---HHHHHHHHH-hC----CCEEec--cC-CHHHHHH----HHHCCCCEEE
Confidence 78999999999876 2 22222 232 22232 32 244554 33 6677644 6689999999
Q ss_pred cCCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc-CCCccCCCcceeeccc
Q psy10250 302 TSTGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML-GPDWLNKDLFRIGASS 375 (387)
Q Consensus 302 TSTGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~-Ga~w~~~~~~RIGtSs 375 (387)
- |..... .+ +.++.++...+ .+.+=+.||| +.+++..|+ .+ |+ .-+|.|.
T Consensus 136 ~---Fpa~~~gG~-------~~lk~l~~~~~-~ipvvaiGGI-~~~N~~~~l-----~agga-------~~v~gS~ 187 (224)
T 1vhc_A 136 F---FPAEASGGV-------KMIKALLGPYA-QLQIMPTGGI-GLHNIRDYL-----AIPNI-------VACGGSW 187 (224)
T ss_dssp E---TTTTTTTHH-------HHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHH-----TSTTB-------CCEEECG
T ss_pred E---eeCccccCH-------HHHHHHHhhCC-CCeEEEECCc-CHHHHHHHH-----hcCCC-------EEEEEch
Confidence 8 531111 12 34555555443 6889999999 458888898 46 55 5777554
No 123
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=93.96 E-value=0.47 Score=47.14 Aligned_cols=120 Identities=10% Similarity=0.036 Sum_probs=74.3
Q ss_pred HHHHHHHH-HCCCCeeeeecCchhhh------------cCCh---------hHHHHHHHHHHHHhCCCcceEEEEee---
Q psy10250 222 LHEIELLA-KQKVDEVDIVIQRSLVL------------NNQW---------PELFSEVKQMKEKCGEKIHMKTILAV--- 276 (387)
Q Consensus 222 ~~Ea~~Ai-~~GAdEID~Vin~~~lk------------~g~~---------~~v~~Ei~~v~~~~~~~~~lKvIlEt--- 276 (387)
+..|+.|. +.|.|-|++=.--|+|. ...| ..+.+=+++|++++++. ++-|=|-.
T Consensus 177 ~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~-~v~vRis~~~~ 255 (379)
T 3aty_A 177 VEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSD-RVGLRISPLNG 255 (379)
T ss_dssp HHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCC-eEEEEECcccc
Confidence 45677888 89999999743222111 2222 34455567888888742 33222211
Q ss_pred -----ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHH
Q psy10250 277 -----GELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 277 -----~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
.-. +.++....++.+.++|+|||-.|.|.... ...+. + ++.+++.+ ++.|=+.||| |.++|.++
T Consensus 256 ~~~~~~~~-~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-~~~~~-----~-~~~ir~~~--~iPvi~~G~i-t~~~a~~~ 324 (379)
T 3aty_A 256 VHGMIDSN-PEALTKHLCKKIEPLSLAYLHYLRGDMVN-QQIGD-----V-VAWVRGSY--SGVKISNLRY-DFEEADQQ 324 (379)
T ss_dssp GGGCCCSC-HHHHHHHHHHHHGGGCCSEEEEECSCTTS-CCCCC-----H-HHHHHTTC--CSCEEEESSC-CHHHHHHH
T ss_pred cccCCCCC-CHHHHHHHHHHHHHhCCCEEEEcCCCcCC-CCccH-----H-HHHHHHHC--CCcEEEECCC-CHHHHHHH
Confidence 112 34667778888899999999988753111 11111 3 55566555 4567789999 99999999
Q ss_pred HH
Q psy10250 352 IY 353 (387)
Q Consensus 352 i~ 353 (387)
+.
T Consensus 325 l~ 326 (379)
T 3aty_A 325 IR 326 (379)
T ss_dssp HH
T ss_pred HH
Confidence 94
No 124
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=93.94 E-value=0.3 Score=46.93 Aligned_cols=90 Identities=20% Similarity=0.255 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+-++.+++..++ ..|+.+|+.- .++..+ |.++|+|||=-.. .+++ .++...+..++
T Consensus 182 i~~av~~ar~~~~~--~~~IgVev~t---~eea~e----A~~aGaD~I~ld~------~~~~-------~~k~av~~v~~ 239 (286)
T 1x1o_A 182 VGEAVRRAKARAPH--YLKVEVEVRS---LEELEE----ALEAGADLILLDN------FPLE-------ALREAVRRVGG 239 (286)
T ss_dssp HHHHHHHHHHHSCT--TSCEEEEESS---HHHHHH----HHHHTCSEEEEES------CCHH-------HHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCC--CCEEEEEeCC---HHHHHH----HHHcCCCEEEECC------CCHH-------HHHHHHHHhCC
Confidence 35567777776654 3578888753 455543 4578999996444 3444 23333344556
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchH
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLL 377 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~ 377 (387)
++.+=+|||| |++.+..|. ..|+ +.|+.+++.
T Consensus 240 ~ipi~AsGGI-t~eni~~~a-----~tGv-------D~IsVgs~~ 271 (286)
T 1x1o_A 240 RVPLEASGNM-TLERAKAAA-----EAGV-------DYVSVGALT 271 (286)
T ss_dssp SSCEEEESSC-CHHHHHHHH-----HHTC-------SEEECTHHH
T ss_pred CCeEEEEcCC-CHHHHHHHH-----HcCC-------CEEEEcHHH
Confidence 7899999999 589999999 5898 588877643
No 125
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=93.88 E-value=1.6 Score=42.32 Aligned_cols=152 Identities=9% Similarity=0.052 Sum_probs=103.6
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++-+. +| ..+.+.-..+++.+.+.|.+-|.+ +.+. ++.+...+=+++|++++++. +.+.+....--
T Consensus 133 ~vp~~~~-~g----~~~~~~~~~~a~~~~~~Gf~~iKi--k~g~---~~~~~~~e~v~avr~a~g~~--~~l~vDan~~~ 200 (359)
T 1mdl_A 133 PVQAYDS-HS----LDGVKLATERAVTAAELGFRAVKT--RIGY---PALDQDLAVVRSIRQAVGDD--FGIMVDYNQSL 200 (359)
T ss_dssp CEEEEEE-CC----SCHHHHHHHHHHHHHHTTCSEEEE--ECCC---SSHHHHHHHHHHHHHHHCSS--SEEEEECTTCS
T ss_pred Ceeeeee-cC----CCCHHHHHHHHHHHHHcCCCEEEE--ecCC---CCHHHHHHHHHHHHHHhCCC--CEEEEECCCCC
Confidence 4555444 23 345666678899999999999996 3331 35666777788899988753 45566654322
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
+.++..+.++...+.|++||--+..- ... +..+.+++.+ ++.|=+-+.+.|.+++..++. .-+
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iE~P~~~----~~~-------~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~----~~~ 263 (359)
T 1mdl_A 201 DVPAAIKRSQALQQEGVTWIEEPTLQ----HDY-------EGHQRIQSKL--NVPVQMGENWLGPEEMFKALS----IGA 263 (359)
T ss_dssp CHHHHHHHHHHHHHHTCSCEECCSCT----TCH-------HHHHHHHHTC--SSCEEECTTCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHHHHhCCCeEECCCCh----hhH-------HHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHH----cCC
Confidence 56777777888888999999865421 122 3445555543 577778888999999999995 345
Q ss_pred CCccCCCcceeec-cchHHHHH
Q psy10250 361 PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 361 a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
++.++.+..++|. +..+++..
T Consensus 264 ~d~v~ik~~~~GGi~~~~~i~~ 285 (359)
T 1mdl_A 264 CRLAMPDAMKIGGVTGWIRASA 285 (359)
T ss_dssp CSEECCBTTTTTHHHHHHHHHH
T ss_pred CCEEeecchhhCCHHHHHHHHH
Confidence 7888899999965 55555544
No 126
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.79 E-value=4.3 Score=37.84 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 321 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 321 ~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+-|+.+++.+ .+.|=+-|||+|.+++.++. .|+|
T Consensus 196 ~~v~~vr~~~--~~pv~vG~GI~t~e~~~~~~------~gAD 229 (262)
T 2ekc_A 196 KKVEEYRELC--DKPVVVGFGVSKKEHAREIG------SFAD 229 (262)
T ss_dssp HHHHHHHHHC--CSCEEEESSCCSHHHHHHHH------TTSS
T ss_pred HHHHHHHhhc--CCCEEEeCCCCCHHHHHHHH------cCCC
Confidence 4556666665 45566689999999999954 7875
No 127
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.73 E-value=4.9 Score=38.25 Aligned_cols=227 Identities=14% Similarity=0.054 Sum_probs=122.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccc--cccCCCCCCHHHHH
Q psy10250 72 TSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFID--LTTLSGDDTEAVVE 149 (387)
Q Consensus 72 ~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID--~T~L~~~~T~~~i~ 149 (387)
+.+++....+.+.++|+++|--.+ |. ++...+.| .+..+.++.+.+.-+ ...|-+ +.++|+
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~-~~----~~~~~~~~----------~d~~~~~~~~~~~~~~~~~~l~~--~~~~i~ 90 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGS-FV----SPKWVPQM----------AGSAEVFAGIRQRPGVTYAALAP--NLKGFE 90 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE-CS----CTTTCGGG----------TTHHHHHHHSCCCTTSEEEEECC--SHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEECC-Cc----Cccccccc----------cCHHHHHHHhhhcCCCEEEEEeC--CHHHHH
Confidence 567788888999999999999654 22 22222222 111122333333212 222333 555554
Q ss_pred HHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE--CCcc-----------------HHHHHHHhhhcCCCCCceEEEEe--
Q psy10250 150 TLTLKAIQPLSEELKEKVLHQQANVHTAAVCV--YPAR-----------------VVDVIKVLDRENARDDVKVASVA-- 208 (387)
Q Consensus 150 ~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV--~P~~-----------------v~~a~~~L~~~~~~~~v~v~tVv-- 208 (387)
+ |. +.|+..|.+ ..+. +..+.+..+. .++.|-.-+
T Consensus 91 ~----a~----------------~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~----~G~~V~~~l~~ 146 (302)
T 2ftp_A 91 A----AL----------------ESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ----HQVRVRGYISC 146 (302)
T ss_dssp H----HH----------------HTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH----TTCEEEEEEEC
T ss_pred H----HH----------------hCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH----CCCeEEEEEEE
Confidence 4 44 234555555 2221 1333344443 355554331
Q ss_pred -cCCCC-CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHH
Q psy10250 209 -AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIY 286 (387)
Q Consensus 209 -igFP~-G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~ 286 (387)
.|.|. |..+.+.-+.-++.+.+.|+|.|=+.=-.|. .....+++-++.+++..++ . .|+..-=++.-.=.
T Consensus 147 ~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~-~----~l~~H~Hn~~Gla~ 218 (302)
T 2ftp_A 147 VLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPR-E----RLAGHFHDTYGQAL 218 (302)
T ss_dssp TTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCG-G----GEEEEEBCTTSCHH
T ss_pred EeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCC-C----eEEEEeCCCccHHH
Confidence 24453 4455666666678888999999887722443 4677777777877765532 2 23433221212222
Q ss_pred HHHHHHHHcCCCEEEcCC-CCCC--------CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 287 CASMTAMFAGSDFIKTST-GKEK--------TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTST-Gf~~--------~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
.-+..|+++|++.|-+|- |.|. +++.+|.+..++ +..+... || +++.....-.++.+
T Consensus 219 An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l-------~~~g~~~------~i-dl~~l~~~~~~~~~ 284 (302)
T 2ftp_A 219 ANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLL-------NGLEIHT------GV-DMHALVDAGQRICA 284 (302)
T ss_dssp HHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHH-------HHTTCBC------CC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHH-------HhcCCCC------Cc-CHHHHHHHHHHHHH
Confidence 335678999999999876 4543 456666443332 2223232 34 46666666666666
Q ss_pred hcCC
Q psy10250 358 MLGP 361 (387)
Q Consensus 358 ~~Ga 361 (387)
.+|.
T Consensus 285 ~~~~ 288 (302)
T 2ftp_A 285 VLGK 288 (302)
T ss_dssp HHCC
T ss_pred HhCC
Confidence 7664
No 128
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=93.71 E-value=0.43 Score=47.35 Aligned_cols=126 Identities=11% Similarity=0.036 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhh-----------cC--------ChhHHHHHHHHHHHHhCC-CcceEEEEee---
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVL-----------NN--------QWPELFSEVKQMKEKCGE-KIHMKTILAV--- 276 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk-----------~g--------~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt--- 276 (387)
.=...|+.|.+.|.|-||+=.-=|+|. .. +...+.+=+++|++++++ ++.+|+=...
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 445668889999999999654322221 11 123455667888888874 2333332110
Q ss_pred ---ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCC-CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 277 ---GELKTSENIYCASMTAMFAGSDFIKTSTGKEK-TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 277 ---~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~-~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
... +.++....++.+.++|+|||--|.|... .+...... +.++.+++.++ +.|=+.||| +.++|.+++
T Consensus 248 g~~~~~-~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~----~~~~~vr~~~~--iPvi~~G~i-~~~~a~~~l 319 (376)
T 1icp_A 248 EAGDTN-PTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECT----ESLVPMRKAYK--GTFIVAGGY-DREDGNRAL 319 (376)
T ss_dssp TCCCSC-HHHHHHHHHHHHGGGCCSEEEEECCSCCC------CC----CCSHHHHHHCC--SCEEEESSC-CHHHHHHHH
T ss_pred CCCCCC-CHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccH----HHHHHHHHHcC--CCEEEeCCC-CHHHHHHHH
Confidence 111 2345667788889999999998877321 11100000 12344555553 467789999 999999999
Q ss_pred H
Q psy10250 353 Y 353 (387)
Q Consensus 353 ~ 353 (387)
.
T Consensus 320 ~ 320 (376)
T 1icp_A 320 I 320 (376)
T ss_dssp H
T ss_pred H
Confidence 4
No 129
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=93.69 E-value=1.5 Score=44.43 Aligned_cols=202 Identities=11% Similarity=0.061 Sum_probs=122.5
Q ss_pred hccccccc------CCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-CCccHHHHH---HHhhhcCCCC
Q psy10250 131 IEFIDLTT------LSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-YPARVVDVI---KVLDRENARD 200 (387)
Q Consensus 131 ~~~ID~T~------L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-~P~~v~~a~---~~L~~~~~~~ 200 (387)
+..+|-|+ +....|.++-.++++.-. +.||.-+=+ +|.+.+.-. +.+... +.
T Consensus 40 V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~----------------~~Gv~~IEvG~P~asp~d~~~~~~i~~~--~~ 101 (423)
T 3ivs_A 40 FSIIESTLREGEQFANAFFDTEKKIQIAKALD----------------NFGVDYIELTSPVASEQSRQDCEAICKL--GL 101 (423)
T ss_dssp CEEEECTTTGGGGSTTCCCCHHHHHHHHHHHH----------------HHTCSEEEECCTTSCHHHHHHHHHHHTS--CC
T ss_pred EEEEECCCCCCCCCCCCCcCHHHHHHHHHHHH----------------HcCCCEEEEeecccCHHHHHHHHHHHhc--CC
Confidence 45677764 455568888888877655 457777776 677776522 233322 23
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCC-CcceEEEE
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTIL 274 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~-~~~lKvIl 274 (387)
..++++.+ -| ....++.|++.|+++|.+++..+.+ ...+.+.+.+.+..+++.+.. +..+-+-+
T Consensus 102 ~~~v~~~~--r~--------~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~ 171 (423)
T 3ivs_A 102 KCKILTHI--RC--------HMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS 171 (423)
T ss_dssp SSEEEEEE--ES--------CHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEee--cc--------ChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 45555542 11 1234788899999999999866543 234677788888888877754 34566667
Q ss_pred eeccCCChHHHHHHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe--ccCCCHHHHHH
Q psy10250 275 AVGELKTSENIYCASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA--GGISTFEDSVR 350 (387)
Q Consensus 275 Et~~L~t~e~i~~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas--GGIrt~~~a~~ 350 (387)
|.+.-.+++.+.+.++.+.++|+|.| +-..|. ++|..+..+++.+ ++..+-.+++..= -|--. ..++.
T Consensus 172 eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~----~~P~~v~~lv~~l---~~~~~~~i~~H~Hnd~GlAv-AN~la 243 (423)
T 3ivs_A 172 EDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGC----ATPRQVYDLIRTL---RGVVSCDIECHFHNDTGMAI-ANAYC 243 (423)
T ss_dssp ESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSC----CCHHHHHHHHHHH---HHHCSSEEEEEEBCTTSCHH-HHHHH
T ss_pred ccCcCCCHHHHHHHHHHHHHhCCCccccCCccCc----CCHHHHHHHHHHH---HhhcCCeEEEEECCCCchHH-HHHHH
Confidence 88776677888899999999999965 344553 6788777665544 4444444444431 11111 22233
Q ss_pred HHHHHHHhcCCCccCCCcceeec
Q psy10250 351 WIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 351 ~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
-+ ++|+++++....=+|-
T Consensus 244 Av-----~aGa~~vd~ti~GlGE 261 (423)
T 3ivs_A 244 AL-----EAGATHIDTSILGIGE 261 (423)
T ss_dssp HH-----HTTCCEEEEBGGGCSS
T ss_pred HH-----HhCCCEEEEecccccC
Confidence 33 5899876655555553
No 130
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.60 E-value=0.081 Score=48.27 Aligned_cols=84 Identities=20% Similarity=0.350 Sum_probs=53.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCCh--hHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHH
Q psy10250 1 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQW--PELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYY 78 (387)
Q Consensus 1 gFP~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~--~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~ 78 (387)
+||.+.........+++.+++.|||.|.+= .. ..++. ..+.+.++.+++..++ ++++++.. +.++
T Consensus 79 ~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~--~~--~~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~---t~~e--- 145 (234)
T 1yxy_A 79 DYPPQEPFITATMTEVDQLAALNIAVIAMD--CT--KRDRHDGLDIASFIRQVKEKYPN---QLLMADIS---TFDE--- 145 (234)
T ss_dssp CCTTSCCCBSCSHHHHHHHHTTTCSEEEEE--CC--SSCCTTCCCHHHHHHHHHHHCTT---CEEEEECS---SHHH---
T ss_pred CCCccccccCChHHHHHHHHHcCCCEEEEc--cc--ccCCCCCccHHHHHHHHHHhCCC---CeEEEeCC---CHHH---
Confidence 366655444446778999999999976432 22 22222 2455667777766532 46888764 4444
Q ss_pred HHHHHHHcCCCEE-ecCCCCC
Q psy10250 79 ASMTAMFAGSDFI-KTSTGKE 98 (387)
Q Consensus 79 a~~~a~~ag~dfv-KTSTG~~ 98 (387)
+..+.++|+||| ++..|+.
T Consensus 146 -a~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 146 -GLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp -HHHHHHTTCSEEECTTTTSS
T ss_pred -HHHHHHcCCCEEeeeccccC
Confidence 456688999999 5677764
No 131
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.55 E-value=0.46 Score=43.40 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCCEEE-cCC--CCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc---C
Q psy10250 287 CASMTAMFAGSDFIK-TST--GKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML---G 360 (387)
Q Consensus 287 ~a~~ia~~aGaDfVK-TST--Gf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~---G 360 (387)
..++.+.+.|+|+|= |++ ++...|..+ +.++.+++.. .+.|=++|||++.+++..++ .+ |
T Consensus 150 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~-------~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~-----~~~~~G 215 (244)
T 1vzw_A 150 ETLDRLNKEGCARYVVTDIAKDGTLQGPNL-------ELLKNVCAAT--DRPVVASGGVSSLDDLRAIA-----GLVPAG 215 (244)
T ss_dssp HHHHHHHHTTCCCEEEEEC-------CCCH-------HHHHHHHHTC--SSCEEEESCCCSHHHHHHHH-----TTGGGT
T ss_pred HHHHHHHhCCCCEEEEeccCcccccCCCCH-------HHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----hhccCC
Confidence 345667778999543 443 222223334 3455555543 57889999999999999999 57 8
Q ss_pred CC
Q psy10250 361 PD 362 (387)
Q Consensus 361 a~ 362 (387)
++
T Consensus 216 ad 217 (244)
T 1vzw_A 216 VE 217 (244)
T ss_dssp EE
T ss_pred Cc
Confidence 74
No 132
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=93.55 E-value=0.43 Score=46.66 Aligned_cols=88 Identities=16% Similarity=0.199 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+=+++.++.++. .|+++|+.-| ++..+ |+++|+|+|.=-++ +++ .++...+..++
T Consensus 218 i~~Av~~ar~~~p~---~kIeVEVdtl---dea~e----Al~aGaD~I~LDn~------~~~-------~l~~av~~l~~ 274 (320)
T 3paj_A 218 IRQAISTAKQLNPG---KPVEVETETL---AELEE----AISAGADIIMLDNF------SLE-------MMREAVKINAG 274 (320)
T ss_dssp HHHHHHHHHHHSTT---SCEEEEESSH---HHHHH----HHHTTCSEEEEESC------CHH-------HHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCC---CeEEEEECCH---HHHHH----HHHcCCCEEEECCC------CHH-------HHHHHHHHhCC
Confidence 34455666665554 4899999866 44543 45689999986553 454 34444444567
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.|=+||||. .+.+.+|. ..|+ +.|+++++
T Consensus 275 ~v~ieaSGGIt-~~~I~~~a-----~tGV-------D~isvGal 305 (320)
T 3paj_A 275 RAALENSGNIT-LDNLKECA-----ETGV-------DYISVGAL 305 (320)
T ss_dssp SSEEEEESSCC-HHHHHHHH-----TTTC-------SEEECTHH
T ss_pred CCeEEEECCCC-HHHHHHHH-----HcCC-------CEEEECce
Confidence 89999999995 88888888 5888 57877764
No 133
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=93.44 E-value=0.69 Score=46.32 Aligned_cols=131 Identities=8% Similarity=0.015 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhh-----------c--------CChhHHHHHHHHHHHHhCC-CcceEEEEeecc-
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVL-----------N--------NQWPELFSEVKQMKEKCGE-KIHMKTILAVGE- 278 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk-----------~--------g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~- 278 (387)
.=+..|+.|.+.|.|-||+=.-=|+|. . ++...+.+=+++|++++++ ++.+|+=....+
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 335667888999999999755211111 1 1233456667888888874 334444322110
Q ss_pred -CC---ChHHHHHHHHHHHHcC------CCEEEcCCCCCCC---CC--ChhhhHhHHHHHHHHHHHcCCCceEeEeccCC
Q psy10250 279 -LK---TSENIYCASMTAMFAG------SDFIKTSTGKEKT---NA--TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIS 343 (387)
Q Consensus 279 -L~---t~e~i~~a~~ia~~aG------aDfVKTSTGf~~~---ga--t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIr 343 (387)
+. +.++....++.+.++| +|||--|.|.... .. .+.....-.+.++.+++.++ +.|=+.|||
T Consensus 252 g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~--iPvi~~G~i- 328 (402)
T 2hsa_B 252 DAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ--GTFICSGGY- 328 (402)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS--SCEEEESSC-
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC--CCEEEeCCC-
Confidence 10 2356677888889999 9999998874211 11 00000011245666777664 567789999
Q ss_pred CHHHHHHHHH
Q psy10250 344 TFEDSVRWIY 353 (387)
Q Consensus 344 t~~~a~~~i~ 353 (387)
|.++|.+++.
T Consensus 329 ~~~~a~~~l~ 338 (402)
T 2hsa_B 329 TRELGIEAVA 338 (402)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999994
No 134
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=93.29 E-value=3.4 Score=39.40 Aligned_cols=198 Identities=10% Similarity=0.032 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccc---ccCCCCCCHHHH
Q psy10250 72 TSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDL---TTLSGDDTEAVV 148 (387)
Q Consensus 72 ~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~---T~L~~~~T~~~i 148 (387)
+.+++.+.++...++|+++|-.. |. .. .+.+ | ++++++.+..+. +.|.+ ...+++
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g--~p--~~-~~~d--~--------------e~v~~i~~~~~~~~i~~l~~-~~~~di 82 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAG--FP--IS-SPGD--F--------------ECVKAIAKAIKHCSVTGLAR-CVEGDI 82 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE--CG--GG-CHHH--H--------------HHHHHHHHHCCSSEEEEEEE-SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe--CC--CC-CccH--H--------------HHHHHHHHhcCCCEEEEEec-CCHHHH
Confidence 45777778888899999999853 31 11 1111 1 122333333333 33433 346788
Q ss_pred HHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE----CCccH---------------HHHHHHhhhcCCCCCceEEEEec
Q psy10250 149 ETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV----YPARV---------------VDVIKVLDRENARDDVKVASVAA 209 (387)
Q Consensus 149 ~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV----~P~~v---------------~~a~~~L~~~~~~~~v~v~tVvi 209 (387)
+..++... ..++..|.+ ++.|. ..+.+..+. .+..|..
T Consensus 83 ~~a~~~~~----------------~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~----~g~~v~~--- 139 (293)
T 3ewb_X 83 DRAEEALK----------------DAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQ----KFDVVQF--- 139 (293)
T ss_dssp HHHHHHHT----------------TCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHT----TCSCEEE---
T ss_pred HHHHHHHh----------------hcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHh----CCCEEEE---
Confidence 77776654 334444433 23332 222333333 2344322
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 210 GFP-SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 210 gFP-~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
+.| .|..+.+.-+.-++.+.+.||++|-+.=-.|. .....+++-++.+++..++ . =++.|+...=+|.-.-..-
T Consensus 140 ~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~-~-~~~~l~~H~Hnd~Gla~AN 214 (293)
T 3ewb_X 140 SPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGY---TNPTEFGQLFQDLRREIKQ-F-DDIIFASHCHDDLGMATAN 214 (293)
T ss_dssp EEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC---CCHHHHHHHHHHHHHHCTT-G-GGSEEEEECBCTTSCHHHH
T ss_pred EeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---CCHHHHHHHHHHHHHhcCC-c-cCceEEEEeCCCcChHHHH
Confidence 233 34566776677788899999999866644554 4578888888888887764 1 1355666655554444445
Q ss_pred HHHHHHcCCCEEEcCC-CCC--CCCCChhhhHhH
Q psy10250 289 SMTAMFAGSDFIKTST-GKE--KTNATIPAGIIM 319 (387)
Q Consensus 289 ~~ia~~aGaDfVKTST-Gf~--~~gat~~~~~~m 319 (387)
+..|+++|++.|-+|- |+| .+++.+|.+..+
T Consensus 215 ~laA~~aGa~~vd~sv~GlGeraGN~~~E~vv~~ 248 (293)
T 3ewb_X 215 ALAAIENGARRVEGTINGIGERAGNTALEEVAVA 248 (293)
T ss_dssp HHHHHHTTCCEEEEBGGGCCTTTCBCBHHHHHHH
T ss_pred HHHHHHhCCCEEEeeccccccccccHhHHHHHHH
Confidence 6789999999999886 454 356777654444
No 135
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.27 E-value=2.1 Score=41.98 Aligned_cols=139 Identities=12% Similarity=0.033 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMF 294 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~ 294 (387)
.+.+.-..+++.+.+.|.+-|.+ +.+ ++.+...+=+++|+++++ . +.+.+... -+ +.++..+.++...+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~g-d--~~l~vD~n~~~-~~~~a~~~~~~l~~ 215 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYL--KVG----RGEKLDLEITAAVRGEIG-D--ARLRLDANEGW-SVHDAINMCRKLEK 215 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE--ECC----SCHHHHHHHHHHHHTTST-T--CEEEEECTTCC-CHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--CcC----CCHHHHHHHHHHHHHHcC-C--cEEEEecCCCC-CHHHHHHHHHHHHh
Confidence 56677788899999999999986 333 256666667788887776 3 34555643 34 56777777888888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|++||--+.. .... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-+++.+..+..++|.
T Consensus 216 ~~i~~iEqP~~----~~~~-------~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~----~~~~d~v~ik~~~~GGi 278 (384)
T 2pgw_A 216 YDIEFIEQPTV----SWSI-------PAMAHVREKV--GIPIVADQAAFTLYDVYEICR----QRAADMICIGPREIGGI 278 (384)
T ss_dssp GCCSEEECCSC----TTCH-------HHHHHHHHHC--SSCEEESTTCCSHHHHHHHHH----TTCCSEEEECHHHHTSH
T ss_pred cCCCEEeCCCC----hhhH-------HHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHH----cCCCCEEEEcchhhCCH
Confidence 99999985542 1122 3455566554 477888888999999999995 3447888888888865
Q ss_pred cchHHHHH
Q psy10250 374 SSLLNNIL 381 (387)
Q Consensus 374 Ss~~~il~ 381 (387)
+..+++..
T Consensus 279 t~~~~i~~ 286 (384)
T 2pgw_A 279 QPMMKAAA 286 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555543
No 136
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=93.23 E-value=5.8 Score=39.08 Aligned_cols=152 Identities=11% Similarity=0.094 Sum_probs=104.3
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 281 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t 281 (387)
+++-+.+.|| ..+.+.-..+++.+++.|.+-+.+=+ |. +.+.-.+=+++|++++++. +.+.+....=-+
T Consensus 139 v~~y~~~~~~---~~~~e~~~~~a~~~~~~G~~~iKiKv--G~----~~~~d~~~v~avR~a~g~d--~~l~vDan~~~~ 207 (389)
T 3ozy_A 139 VRAYASSIYW---DLTPDQAADELAGWVEQGFTAAKLKV--GR----APRKDAANLRAMRQRVGAD--VEILVDANQSLG 207 (389)
T ss_dssp EEEEEEEECS---SCCHHHHHHHHHHHHHTTCSEEEEEC--CS----CHHHHHHHHHHHHHHHCTT--SEEEEECTTCCC
T ss_pred eeeEEecCCC---CCCHHHHHHHHHHHHHCCCCEEeecc--CC----CHHHHHHHHHHHHHHcCCC--ceEEEECCCCcC
Confidence 7766652144 45677778889999999999988743 32 5666677788888888753 456676543336
Q ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHH-HHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 282 SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFH-KLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~-~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
.++-.+.++...+.|.+||--+..- ..+ +..+.++ +. -++.|=+-+.+.+.+++..++. .-+
T Consensus 208 ~~~A~~~~~~l~~~~i~~iEqP~~~----~d~-------~~~~~l~~~~--~~iPIa~dE~i~~~~~~~~~i~----~~~ 270 (389)
T 3ozy_A 208 RHDALAMLRILDEAGCYWFEEPLSI----DDI-------EGHRILRAQG--TPVRIATGENLYTRNAFNDYIR----NDA 270 (389)
T ss_dssp HHHHHHHHHHHHHTTCSEEESCSCT----TCH-------HHHHHHHTTC--CSSEEEECTTCCHHHHHHHHHH----TTC
T ss_pred HHHHHHHHHHHHhcCCCEEECCCCc----ccH-------HHHHHHHhcC--CCCCEEeCCCCCCHHHHHHHHH----cCC
Confidence 7777778888888999999855421 122 2344444 32 3466666667999999999995 345
Q ss_pred CCccCCCcceeec-cchHHHHH
Q psy10250 361 PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 361 a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
++.++++..|+|. +..+++..
T Consensus 271 ~d~v~ik~~~~GGit~~~~ia~ 292 (389)
T 3ozy_A 271 IDVLQADASRAGGITEALAISA 292 (389)
T ss_dssp CSEECCCTTTSSCHHHHHHHHH
T ss_pred CCEEEeCccccCCHHHHHHHHH
Confidence 8888999999964 55555544
No 137
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=93.17 E-value=0.61 Score=53.82 Aligned_cols=100 Identities=22% Similarity=0.275 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC-CCCCChhhhH-----hHHHH
Q psy10250 250 WPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE-KTNATIPAGI-----IMCSA 322 (387)
Q Consensus 250 ~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~-~~gat~~~~~-----~m~~~ 322 (387)
++.+.+-|..++++.++ ++.+|++-.++.. ..++.+.++|||+|-- .|++ ..++++-... -....
T Consensus 977 ~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~-------~~A~~a~~AGAD~IvV-sG~eGGTgasp~~~~~~~G~Pt~~a 1048 (1479)
T 1ea0_A 977 IEDLAQLIYDLKQINPDAKVTVKLVSRSGIG-------TIAAGVAKANADIILI-SGNSGGTGASPQTSIKFAGLPWEMG 1048 (1479)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECCTTHH-------HHHHHHHHTTCSEEEE-ECTTCCCSSEETTHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCChH-------HHHHHHHHcCCcEEEE-cCCCCCCCCCchhhhcCCchhHHHH
Confidence 45567778888887643 3567777653222 1245688999999965 4553 2233321100 01123
Q ss_pred HHHHHHHc-----CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 323 IKHFHKLS-----GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 323 v~~~~~~~-----~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+...++.. +.++.|=++|||+|..++.+.+ .+||+
T Consensus 1049 L~ev~~al~~~glr~~VpVIAdGGIrtG~DVakAL-----aLGAd 1088 (1479)
T 1ea0_A 1049 LSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAA-----MLGAE 1088 (1479)
T ss_dssp HHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHH-----HcCCC
Confidence 33333332 3579999999999999999999 59996
No 138
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.17 E-value=0.28 Score=46.07 Aligned_cols=115 Identities=15% Similarity=0.104 Sum_probs=68.2
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 303 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS 303 (387)
++.+|.+.|||-|=+- ...+. ++++++.+.++. .-+-+++|+.-. ++.. .+.+.|+|||=..
T Consensus 120 qi~~a~~~GAD~VlL~--~~~l~--------~~l~~l~~~a~~-lGl~~lvev~~~---~E~~----~a~~~gad~IGvn 181 (254)
T 1vc4_A 120 MLEEARAFGASAALLI--VALLG--------ELTGAYLEEARR-LGLEALVEVHTE---RELE----IALEAGAEVLGIN 181 (254)
T ss_dssp HHHHHHHTTCSEEEEE--HHHHG--------GGHHHHHHHHHH-HTCEEEEEECSH---HHHH----HHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEC--ccchH--------HHHHHHHHHHHH-CCCeEEEEECCH---HHHH----HHHHcCCCEEEEc
Confidence 5677899999985443 33332 233333333322 236777888744 5553 4677899998542
Q ss_pred C-CCCCCCCChhhhHhHHHHHHHHHHHcCC---CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 304 T-GKEKTNATIPAGIIMCSAIKHFHKLSGK---KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 304 T-Gf~~~gat~~~~~~m~~~v~~~~~~~~~---~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
. .+...+..++ ..+.+.+..+. .+.+=++|||+|.+++..+. . |++ .+-+|.+
T Consensus 182 ~~~l~~~~~dl~-------~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~-----~-Ga~-----gvlVGsA 238 (254)
T 1vc4_A 182 NRDLATLHINLE-------TAPRLGRLARKRGFGGVLVAESGYSRKEELKALE-----G-LFD-----AVLIGTS 238 (254)
T ss_dssp SBCTTTCCBCTT-------HHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTT-----T-TCS-----EEEECHH
T ss_pred cccCcCCCCCHH-------HHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHH-----c-CCC-----EEEEeHH
Confidence 2 2212233343 22233333332 45677899999999999998 7 874 5677764
No 139
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.10 E-value=0.33 Score=44.11 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=62.1
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.+++.|++.|||-+ + ++..+ .++.+.+...+ +.+|+-+ . |.+++.+ |.+.|+||||-
T Consensus 74 d~~~~A~~~GAd~v--~-------~~~~d---~~v~~~~~~~g----~~~i~G~--~-t~~e~~~----A~~~Gad~v~~ 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFL--V-------SPGLL---EEVAALAQARG----VPYLPGV--L-TPTEVER----ALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCSEE--E-------ESSCC---HHHHHHHHHHT----CCEEEEE--C-SHHHHHH----HHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEE--E-------cCCCC---HHHHHHHHHhC----CCEEecC--C-CHHHHHH----HHHCCCCEEEE
Confidence 78999999999865 2 22222 23333333333 2355553 2 5677654 45779999998
Q ss_pred CCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 STGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 STGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|..... .+ +-++.++...+ ++.+=+.|||. .+++.+|+ .+|++
T Consensus 131 ---fpa~~~gG~-------~~lk~l~~~~~-~ipvvaiGGI~-~~n~~~~l-----~aGa~ 174 (207)
T 2yw3_A 131 ---FPAEPFQGV-------RVLRAYAEVFP-EVRFLPTGGIK-EEHLPHYA-----ALPNL 174 (207)
T ss_dssp ---TTTTTTTHH-------HHHHHHHHHCT-TCEEEEBSSCC-GGGHHHHH-----TCSSB
T ss_pred ---ecCccccCH-------HHHHHHHhhCC-CCcEEEeCCCC-HHHHHHHH-----hCCCc
Confidence 421111 12 23555555543 68889999997 69999999 58883
No 140
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.04 E-value=1.7 Score=42.42 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=64.7
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
..++.+++.|++-|.+-. + ... .+.++.+++ . + ++|+... .+.++ ++.+.++|+|||.-
T Consensus 113 ~~~~~~~~~g~~~V~~~~--g-----~~~--~~~i~~~~~-~-g---~~v~~~v---~t~~~----a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHF--G-----VPD--REVIARLRR-A-G---TLTLVTA---TTPEE----ARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHSCCSEEEEES--S-----CCC--HHHHHHHHH-T-T---CEEEEEE---SSHHH----HHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEeC--C-----CCc--HHHHHHHHH-C-C---CeEEEEC---CCHHH----HHHHHHcCCCEEEE
Confidence 345667788988776532 1 111 233444443 1 2 4666644 24443 34577899999987
Q ss_pred -CCCCCCC-CCChhhh------HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 -STGKEKT-NATIPAG------IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 -STGf~~~-gat~~~~------~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.+++.. |...+.. .-..+.++.+++.. ++.|=++|||+|.+++.+++ .+|++
T Consensus 172 ~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~~~~l-----~~GAd 232 (369)
T 3bw2_A 172 QGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQIAAVL-----AAGAD 232 (369)
T ss_dssp ECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred eCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHHHHHH-----HcCCC
Confidence 4433221 2111100 01123455555543 57788999999999999999 48985
No 141
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.90 E-value=0.39 Score=45.14 Aligned_cols=118 Identities=11% Similarity=0.053 Sum_probs=65.2
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+.+.|||-+=+. +.. . +|+..+++.++. .-+++|+=...=++++.+...... ..|..|+-
T Consensus 112 ~~~~~~~~~aGadgii~~-d~~------~----e~~~~~~~~~~~-~g~~~i~l~~p~t~~~~i~~i~~~--~~g~v~~~ 177 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVA-DVP------V----EESAPFRQAALR-HNIAPIFICPPNADDDLLRQVASY--GRGYTYLL 177 (268)
T ss_dssp HHHHHHHHHHTCCEEEET-TCC------G----GGCHHHHHHHHH-TTCEEECEECTTCCHHHHHHHHHH--CCSCEEEE
T ss_pred HHHHHHHHHcCCCEEEEc-CCC------H----HHHHHHHHHHHH-cCCcEEEEECCCCCHHHHHHHHhh--CCCcEEEE
Confidence 467788888898864332 222 1 445555555543 124554422221233444333322 23566666
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|..|+.+..... ..-+.+.|+.+++.. .+.|=+-|||+|.+++.+.+ .+|+|
T Consensus 178 s~~G~tG~~~~~--~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~-----~agAD 229 (268)
T 1qop_A 178 SRSGVTGAENRG--ALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAV-----RAGAA 229 (268)
T ss_dssp SSSSCCCSSSCC----CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred ecCCcCCCccCC--CchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHH-----HcCCC
Confidence 777774321111 111224566666655 46677799999999999977 48986
No 142
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=92.89 E-value=0.46 Score=42.71 Aligned_cols=119 Identities=12% Similarity=-0.058 Sum_probs=73.1
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc--CCC--hHHHHHHHHHHHHcCC
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--LKT--SENIYCASMTAMFAGS 297 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~--L~t--~e~i~~a~~ia~~aGa 297 (387)
...++.+.+.|||-|=+=...+ .+ -|+.+++.+ -+-+.-+|+. +.. .+.+....+.+.+.|+
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g------~~----~i~~~~~~~----gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~ 133 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVG------RD----SVMAVKELG----EIIMVVEMSHPGALEFINPLTDRFIEVANEIEP 133 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTC------HH----HHHHHHTTS----EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCCCEEEEeccCC------HH----HHHHHHHhC----CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCC
Confidence 4567888899998765544433 11 155555543 2444444432 101 3446677888999999
Q ss_pred CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCH-HHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 298 DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTF-EDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 298 DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~-~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
|.+|.+. .+++ .++.+++..+...-+ +.|||+.- .++...+ .+|++++-.|+.-++.
T Consensus 134 ~G~~~~~------~~~~-------~i~~lr~~~~~~~~i-v~gGI~~~g~~~~~~~-----~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 134 FGVIAPG------TRPE-------RIGYIRDRLKEGIKI-LAPGIGAQGGKAKDAV-----KAGADYIIVGRAIYNA 191 (208)
T ss_dssp SEEECCC------SSTH-------HHHHHHHHSCTTCEE-EECCCCSSTTHHHHHH-----HHTCSEEEECHHHHTS
T ss_pred cEEEECC------CChH-------HHHHHHHhCCCCeEE-EECCCCCCCCCHHHHH-----HcCCCEEEEChHHhcC
Confidence 9998663 2343 556667777666667 99999863 2566677 4799765544444443
No 143
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=92.88 E-value=0.27 Score=56.86 Aligned_cols=100 Identities=19% Similarity=0.269 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC-CCCCChhhhH-----hHHHH
Q psy10250 250 WPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE-KTNATIPAGI-----IMCSA 322 (387)
Q Consensus 250 ~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~-~~gat~~~~~-----~m~~~ 322 (387)
++.+.+-|..++++.++ ++.+|++-.++.. ..++.+.++|||+|-- .|++ ..++++-... -....
T Consensus 1012 ~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~-------~~A~~a~kAGAD~IvV-sG~eGGTgasp~~~~~~~GlPt~~a 1083 (1520)
T 1ofd_A 1012 IEDLAQLIYDLHQINPEAQVSVKLVAEIGIG-------TIAAGVAKANADIIQI-SGHDGGTGASPLSSIKHAGSPWELG 1083 (1520)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEECSTTHH-------HHHHHHHHTTCSEEEE-ECTTCCCSSEEHHHHHHBCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCChH-------HHHHHHHHcCCCEEEE-eCCCCccCCCcchhhcCCchhHHHH
Confidence 45677788888887643 3567777653322 1235688899999965 4443 2333321100 01123
Q ss_pred HHHHHHHc-----CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 323 IKHFHKLS-----GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 323 v~~~~~~~-----~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+...++.. +.++.|=++|||+|..++.+.+ .+||+
T Consensus 1084 L~ev~~al~~~glr~~IpVIAdGGIrtG~DVakAL-----aLGAd 1123 (1520)
T 1ofd_A 1084 VTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAA-----LMGAE 1123 (1520)
T ss_dssp HHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHH-----HcCCC
Confidence 33333322 3479999999999999999999 59996
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=92.85 E-value=2.1 Score=38.99 Aligned_cols=132 Identities=12% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCC---cceEE----
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK---IHMKT---- 272 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~---~~lKv---- 272 (387)
.++++... .++.. ...++.+++.|||-+ ++....+.+ .+ .+.++++..+.. ..+.+
T Consensus 74 ~~iPvi~~-Ggi~~--------~~~~~~~~~~Gad~V--~lg~~~l~~--p~----~~~~~~~~~~~~~i~~~~~~~~~~ 136 (252)
T 1ka9_F 74 VFIPLTVG-GGVRS--------LEDARKLLLSGADKV--SVNSAAVRR--PE----LIRELADHFGAQAVVLAIDARWRG 136 (252)
T ss_dssp CCSCEEEE-SSCCS--------HHHHHHHHHHTCSEE--EECHHHHHC--TH----HHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEE-CCcCC--------HHHHHHHHHcCCCEE--EEChHHHhC--cH----HHHHHHHHcCCCcEEEEEEEecCC
Confidence 57777666 34432 257888888998763 445554443 22 244444444311 11111
Q ss_pred ---EEeeccCCC--hHHHHHHHHHHHHcCCC-EEEcCCCCCC--CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCC
Q psy10250 273 ---ILAVGELKT--SENIYCASMTAMFAGSD-FIKTSTGKEK--TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIST 344 (387)
Q Consensus 273 ---IlEt~~L~t--~e~i~~a~~ia~~aGaD-fVKTSTGf~~--~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt 344 (387)
.+++.-... .......++.+.+.|++ |+=|+++... .|..+ +.++.+++.+ ++.|=++|||++
T Consensus 137 g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~-------~~i~~l~~~~--~ipvia~GGI~~ 207 (252)
T 1ka9_F 137 DFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDL-------RLTRMVAEAV--GVPVIASGGAGR 207 (252)
T ss_dssp TEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCH-------HHHHHHHHHC--SSCEEEESCCCS
T ss_pred CCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCH-------HHHHHHHHHc--CCCEEEeCCCCC
Confidence 223221100 00112234556678999 5556554321 23333 3455566554 577889999999
Q ss_pred HHHHHHHHHHHHHhcCCC
Q psy10250 345 FEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 345 ~~~a~~~i~l~~~~~Ga~ 362 (387)
.+++..++ .+|++
T Consensus 208 ~~d~~~~~-----~~Gad 220 (252)
T 1ka9_F 208 MEHFLEAF-----QAGAE 220 (252)
T ss_dssp HHHHHHHH-----HTTCS
T ss_pred HHHHHHHH-----HCCCH
Confidence 99999998 47875
No 145
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.76 E-value=0.45 Score=45.14 Aligned_cols=118 Identities=19% Similarity=0.219 Sum_probs=73.1
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.++.+|...|||-|=..+ ++++ .++++.+.+.++. .-+-+++|+. +.+|+.+| .+.|++.|
T Consensus 117 yQI~eAr~~GADaILLI~---a~L~------~~~l~~l~~~A~~-lGl~~LvEVh---~~~El~rA----l~~~a~iI-- 177 (258)
T 4a29_A 117 SQIDDAYNLGADTVLLIV---KILT------ERELESLLEYARS-YGMEPLILIN---DENDLDIA----LRIGARFI-- 177 (258)
T ss_dssp HHHHHHHHHTCSEEEEEG---GGSC------HHHHHHHHHHHHH-TTCCCEEEES---SHHHHHHH----HHTTCSEE--
T ss_pred HHHHHHHHcCCCeeehHH---hhcC------HHHHHHHHHHHHH-HhHHHHHhcc---hHHHHHHH----hcCCCcEE--
Confidence 567788889999764433 2332 1345555555543 3478899987 55777554 56799998
Q ss_pred CCCCCCCC-CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 303 STGKEKTN-ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 303 STGf~~~g-at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
|-..++ -|++ +-++.-..+....+..+-+=+-+||+|.+|+..|. .+|++ .+.||.|
T Consensus 178 --GINNRnL~tf~---vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~-----~~G~~-----a~LVGea 235 (258)
T 4a29_A 178 --GIMSRDFETGE---INKENQRKLISMIPSNVVKVAKLGISERNEIEELR-----KLGVN-----AFLISSS 235 (258)
T ss_dssp --EECSBCTTTCC---BCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHH-----HTTCC-----EEEECHH
T ss_pred --EEeCCCccccc---cCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHH-----HCCCC-----EEEECHH
Confidence 322221 1221 11123333445566555333458999999999998 58974 7999986
No 146
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=92.73 E-value=0.78 Score=41.90 Aligned_cols=115 Identities=16% Similarity=0.165 Sum_probs=60.3
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC-EE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD-FI 300 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD-fV 300 (387)
...++.+++.|||-|=+- +.. .+ +...+.+.++. .-.++|+=..-- |+.+..++ ...++| ||
T Consensus 98 ~~~~~~~~~~Gad~v~~~-~~~------~~----~~~~~~~~~~~-~g~~~~~~i~~~-t~~e~~~~----~~~~~d~~i 160 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV-DLP------VF----HAKEFTEIARE-EGIKTVFLAAPN-TPDERLKV----IDDMTTGFV 160 (248)
T ss_dssp HHHHHHHHHHTCCEEEET-TCC------GG----GHHHHHHHHHH-HTCEEEEEECTT-CCHHHHHH----HHHHCSSEE
T ss_pred HHHHHHHHHCCCCEEEEC-CCC------hh----hHHHHHHHHHH-hCCCeEEEECCC-CHHHHHHH----HHhcCCCeE
Confidence 457888999999986442 221 11 23333333332 124555533333 33433322 222356 65
Q ss_pred E--cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 301 K--TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 301 K--TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
- +..|+........ ....+.++.+++.. ++.|=++|||++.+++..++ .+|++
T Consensus 161 ~~~~~~G~~g~~~~~~--~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~-----~~Gad 215 (248)
T 1geq_A 161 YLVSLYGTTGAREEIP--KTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLL-----KEGAN 215 (248)
T ss_dssp EEECCC-------CCC--HHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHH-----HTTCS
T ss_pred EEEECCccCCCCCCCC--hhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHH-----HcCCC
Confidence 3 3355532211110 11224566666655 57899999999999999998 48984
No 147
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=92.70 E-value=2.3 Score=38.18 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=45.4
Q ss_pred eEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCC---CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHH
Q psy10250 270 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEK---TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFE 346 (387)
Q Consensus 270 lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~---~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~ 346 (387)
+++.+.+. +.++. +.+.+.|+|||-.++.|.. .|..+. ..+.++.+++.. ++.|=++||| |.+
T Consensus 111 ~~ig~sv~---t~~~~----~~a~~~gaD~i~~~~~f~~~~~~g~~~~----~~~~l~~~~~~~--~~pvia~GGI-~~~ 176 (221)
T 1yad_A 111 LHIGRSVH---SLEEA----VQAEKEDADYVLFGHVFETDCKKGLEGR----GVSLLSDIKQRI--SIPVIAIGGM-TPD 176 (221)
T ss_dssp CEEEEEEC---SHHHH----HHHHHTTCSEEEEECCC----------C----HHHHHHHHHHHC--CSCEEEESSC-CGG
T ss_pred CEEEEEcC---CHHHH----HHHHhCCCCEEEECCccccCCCCCCCCC----CHHHHHHHHHhC--CCCEEEECCC-CHH
Confidence 34555442 55554 4456799999988776532 121111 123455555443 5778899999 999
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10250 347 DSVRWIYLVLIMLGPD 362 (387)
Q Consensus 347 ~a~~~i~l~~~~~Ga~ 362 (387)
++..++ .+|++
T Consensus 177 nv~~~~-----~~Ga~ 187 (221)
T 1yad_A 177 RLRDVK-----QAGAD 187 (221)
T ss_dssp GHHHHH-----HTTCS
T ss_pred HHHHHH-----HcCCC
Confidence 999999 48984
No 148
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.66 E-value=0.23 Score=44.49 Aligned_cols=101 Identities=22% Similarity=0.279 Sum_probs=61.4
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
..++.|++.|||-|= . |..+ .++.+.++..+ .++++++ .|.+++. .+.+.|+|||+.
T Consensus 71 ~~i~~a~~~Gad~V~----~-----~~~~---~~~~~~~~~~g----~~~~~g~---~t~~e~~----~a~~~G~d~v~v 127 (212)
T 2v82_A 71 EQVDALARMGCQLIV----T-----PNIH---SEVIRRAVGYG----MTVCPGC---ATATEAF----TALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHTTCCEEE----C-----SSCC---HHHHHHHHHTT----CEEECEE---CSHHHHH----HHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEE----e-----CCCC---HHHHHHHHHcC----CCEEeec---CCHHHHH----HHHHCCCCEEEE
Confidence 378999999998762 1 1111 12222222222 4667773 3556553 456789999995
Q ss_pred CCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 STGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 STGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
..+ ...++ +.++.+++..+.++.|=++|||. .+++..++ .+|++
T Consensus 128 ~~t---~~~g~-------~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~-----~~Ga~ 171 (212)
T 2v82_A 128 FPS---SAFGP-------QYIKALKAVLPSDIAVFAVGGVT-PENLAQWI-----DAGCA 171 (212)
T ss_dssp TTH---HHHCH-------HHHHHHHTTSCTTCEEEEESSCC-TTTHHHHH-----HHTCS
T ss_pred ecC---CCCCH-------HHHHHHHHhccCCCeEEEeCCCC-HHHHHHHH-----HcCCC
Confidence 211 11112 45555555544358899999997 89999998 48985
No 149
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.60 E-value=0.24 Score=45.36 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=65.3
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.+++.|++.|||-+ + +|..+ .++...+...+ +.+|+- -. |++++.+ |.+.|+||||-
T Consensus 79 d~~~~A~~aGAd~v--~-------~p~~d---~~v~~~~~~~g----~~~i~G--~~-t~~e~~~----A~~~Gad~v~~ 135 (214)
T 1wbh_A 79 QQLAEVTEAGAQFA--I-------SPGLT---EPLLKAATEGT----IPLIPG--IS-TVSELML----GMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHHTCSCE--E-------ESSCC---HHHHHHHHHSS----SCEEEE--ES-SHHHHHH----HHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEE--E-------cCCCC---HHHHHHHHHhC----CCEEEe--cC-CHHHHHH----HHHCCCCEEEE
Confidence 78999999999865 1 23222 24444443333 344554 33 5677644 56899999998
Q ss_pred CCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc-CCCccCCCcceeeccc
Q psy10250 303 STGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML-GPDWLNKDLFRIGASS 375 (387)
Q Consensus 303 STGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~-Ga~w~~~~~~RIGtSs 375 (387)
|..... .+ +.++.++...+ .+.+=+.|||. .+++..|+ .+ |+ .-+|.|.
T Consensus 136 ---Fpa~~~gG~-------~~lk~i~~~~~-~ipvvaiGGI~-~~n~~~~l-----~agg~-------~~v~gS~ 186 (214)
T 1wbh_A 136 ---FPAEANGGV-------KALQAIAGPFS-QVRFCPTGGIS-PANYRDYL-----ALKSV-------LCIGGSW 186 (214)
T ss_dssp ---TTTTTTTHH-------HHHHHHHTTCT-TCEEEEBSSCC-TTTHHHHH-----TSTTB-------SCEEEGG
T ss_pred ---ecCccccCH-------HHHHHHhhhCC-CCeEEEECCCC-HHHHHHHH-----hcCCC-------eEEEecc
Confidence 531111 12 34555554443 68899999994 58888898 46 54 6777443
No 150
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=92.55 E-value=0.092 Score=50.55 Aligned_cols=92 Identities=17% Similarity=0.140 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+-++++++.+++ ..|+.+|+. |.++..+| .++|+|||---+ .+++..+ +.++.++.. ..
T Consensus 179 i~~av~~ar~~~~~--~~~I~VEV~---tleea~eA----~~aGaD~I~LDn------~~~e~l~---~av~~l~~~-~~ 239 (285)
T 1o4u_A 179 AERAVQEVRKIIPF--TTKIEVEVE---NLEDALRA----VEAGADIVMLDN------LSPEEVK---DISRRIKDI-NP 239 (285)
T ss_dssp HHHHHHHHHTTSCT--TSCEEEEES---SHHHHHHH----HHTTCSEEEEES------CCHHHHH---HHHHHHHHH-CT
T ss_pred HHHHHHHHHHhCCC--CceEEEEeC---CHHHHHHH----HHcCCCEEEECC------CCHHHHH---HHHHHhhcc-CC
Confidence 44555566655543 478999976 44666554 668999986444 4565332 344444332 34
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.|=+|||| |++.+.+|. ..|+ +.|+++++
T Consensus 240 ~v~ieASGGI-t~eni~~~a-----~tGV-------D~IsvGsl 270 (285)
T 1o4u_A 240 NVIVEVSGGI-TEENVSLYD-----FETV-------DVISSSRL 270 (285)
T ss_dssp TSEEEEEECC-CTTTGGGGC-----CTTC-------CEEEEGGG
T ss_pred CceEEEECCC-CHHHHHHHH-----HcCC-------CEEEEeHH
Confidence 7899999999 678888887 5887 57777664
No 151
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=92.51 E-value=0.32 Score=47.06 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+=+++.++.++. .|+++|+.-| +|..+ |+++|+|.|-=-++ +++ +++...+...+
T Consensus 196 i~~Av~~~r~~~p~---~~ieVEvdtl---de~~e----Al~aGaD~I~LDn~------~~~-------~l~~av~~i~~ 252 (298)
T 3gnn_A 196 VGEALDAAFALNAE---VPVQIEVETL---DQLRT----ALAHGARSVLLDNF------TLD-------MMRDAVRVTEG 252 (298)
T ss_dssp HHHHHHHHHHHC-----CCCEEEESSH---HHHHH----HHHTTCEEEEEESC------CHH-------HHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCC---CCEEEEeCCH---HHHHH----HHHcCCCEEEECCC------CHH-------HHHHHHHHhCC
Confidence 34445566665543 6899998766 45433 56689999986553 354 33333333467
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.|=+|||| |.+...+|. ..|+ +.|+.+++
T Consensus 253 ~v~ieaSGGI-~~~~i~~~a-----~tGV-------D~isvG~l 283 (298)
T 3gnn_A 253 RAVLEVSGGV-NFDTVRAIA-----ETGV-------DRISIGAL 283 (298)
T ss_dssp SEEEEEESSC-STTTHHHHH-----HTTC-------SEEECGGG
T ss_pred CCeEEEEcCC-CHHHHHHHH-----HcCC-------CEEEECCe
Confidence 8999999999 777888888 5898 47766553
No 152
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=92.50 E-value=0.64 Score=47.46 Aligned_cols=148 Identities=15% Similarity=0.190 Sum_probs=92.9
Q ss_pred eEEEEE---------CCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhh
Q psy10250 176 TAAVCV---------YPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVL 246 (387)
Q Consensus 176 ~~aVcV---------~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk 246 (387)
..++.| ++.++..+++.. +++|-.= .| . ..+. ++.+|...|||-|=+.. .. +
T Consensus 81 A~~IsvLTd~~~F~gs~~dL~~vr~~v-------~lPvLrK--DF--I--~d~~---Qi~ea~~~GAD~ILLi~--a~-l 141 (452)
T 1pii_A 81 ASAISVLTDEKYFQGSFNFLPIVSQIA-------PQPILCK--DF--I--IDPY---QIYLARYYQADACLLML--SV-L 141 (452)
T ss_dssp CSEEEEECCSTTTCCCTTHHHHHHHHC-------CSCEEEE--SC--C--CSHH---HHHHHHHTTCSEEEEET--TT-C
T ss_pred CcEEEEEecccccCCCHHHHHHHHHhc-------CCCeEEE--ec--c--CCHH---HHHHHHHcCCCEEEEEc--cc-C
Confidence 467777 666788887653 3455332 32 2 2222 46668899999854443 32 2
Q ss_pred cCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC-CCCCCCCCChhhhHhHHHHHHH
Q psy10250 247 NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS-TGKEKTNATIPAGIIMCSAIKH 325 (387)
Q Consensus 247 ~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS-TGf~~~gat~~~~~~m~~~v~~ 325 (387)
+ .++++.+.+.++. .-+-+++|+.- .+|..+ |.++|+|+|=+. .++......++ ....
T Consensus 142 ~------~~~l~~l~~~a~~-lgm~~LvEvh~---~eE~~~----A~~lga~iIGinnr~L~t~~~dl~-------~~~~ 200 (452)
T 1pii_A 142 D------DDQYRQLAAVAHS-LEMGVLTEVSN---EEEQER----AIALGAKVVGINNRDLRDLSIDLN-------RTRE 200 (452)
T ss_dssp C------HHHHHHHHHHHHH-TTCEEEEEECS---HHHHHH----HHHTTCSEEEEESEETTTTEECTH-------HHHH
T ss_pred C------HHHHHHHHHHHHH-cCCeEEEEeCC---HHHHHH----HHHCCCCEEEEeCCCCCCCCCCHH-------HHHH
Confidence 2 1456666666654 45899999984 466644 567899999763 24422223333 3334
Q ss_pred HHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 326 FHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 326 ~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
+.+..+..+-+=+-|||+|.+|+..+.. + + +.+.||++
T Consensus 201 L~~~ip~~~~vIaEsGI~t~edv~~~~~-----~-a-----~avLVGea 238 (452)
T 1pii_A 201 LAPKLGHNVTVISESGINTYAQVRELSH-----F-A-----NGFLIGSA 238 (452)
T ss_dssp HHHHHCTTSEEEEESCCCCHHHHHHHTT-----T-C-----SEEEECHH
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHHH-----h-C-----CEEEEcHH
Confidence 4455566665667789999999999983 4 4 36888986
No 153
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.49 E-value=7.2 Score=36.75 Aligned_cols=188 Identities=10% Similarity=0.000 Sum_probs=101.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcc--cccccCCCCCCHHHHH
Q psy10250 72 TSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEF--IDLTTLSGDDTEAVVE 149 (387)
Q Consensus 72 ~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--ID~T~L~~~~T~~~i~ 149 (387)
+.+++...++.+.++|++.|--++ |. ++...+.| ++..+.++.+.+. +..+.|-+ +.++++
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~-~~----~~~~~p~~----------~~~~e~~~~i~~~~~~~v~~l~~--n~~~i~ 86 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATS-FV----SPKWVPQL----------ADSREVMAGIRRADGVRYSVLVP--NMKGYE 86 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEE-CS----CTTTCGGG----------TTHHHHHHHSCCCSSSEEEEECS--SHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEcc-Cc----Cccccccc----------cCHHHHHHHHHhCCCCEEEEEeC--CHHHHH
Confidence 567788888898999999999642 22 23333333 2222334444432 22323333 455554
Q ss_pred HHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC--Cc--------------cHHHHH---HHhhhcCCCCCceEEEEe--
Q psy10250 150 TLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY--PA--------------RVVDVI---KVLDRENARDDVKVASVA-- 208 (387)
Q Consensus 150 ~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~--P~--------------~v~~a~---~~L~~~~~~~~v~v~tVv-- 208 (387)
+ |. +.|+..|.|. .+ .+..++ +..+. .+++|-+.+
T Consensus 87 ~----a~----------------~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~----~G~~V~~~l~~ 142 (295)
T 1ydn_A 87 A----AA----------------AAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN----DGLAIRGYVSC 142 (295)
T ss_dssp H----HH----------------HTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH----TTCEEEEEEEC
T ss_pred H----HH----------------HCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH----cCCeEEEEEEE
Confidence 4 44 2344445444 32 233332 23333 245443331
Q ss_pred -cCCCCC-CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHH
Q psy10250 209 -AGFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIY 286 (387)
Q Consensus 209 -igFP~G-~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~ 286 (387)
.|.|.+ ..+.+.=..-++.+.+.|||.|-+.=-.|. .....+++-++.+++..++ .++ -+=. =++.-.-.
T Consensus 143 ~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~~-~~l--~~H~--Hn~~Gla~ 214 (295)
T 1ydn_A 143 VVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAPA-HSL--AGHY--HDTGGRAL 214 (295)
T ss_dssp SSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSCG-GGE--EEEE--BCTTSCHH
T ss_pred EecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCC-CeE--EEEE--CCCcchHH
Confidence 355654 445565566677788899999888744554 4677777878888765542 222 2222 11111111
Q ss_pred HHHHHHHHcCCCEEEcCC-CCCC
Q psy10250 287 CASMTAMFAGSDFIKTST-GKEK 308 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTST-Gf~~ 308 (387)
.-+..|+++|++.|-+|- |.|.
T Consensus 215 an~l~Ai~aG~~~vd~sv~GlG~ 237 (295)
T 1ydn_A 215 DNIRVSLEKGLRVFDASVGGLGG 237 (295)
T ss_dssp HHHHHHHHHTCCEEEEBTTCCSC
T ss_pred HHHHHHHHhCCCEEEeccccCCC
Confidence 224667899999999876 4543
No 154
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=92.23 E-value=4.1 Score=40.41 Aligned_cols=148 Identities=9% Similarity=-0.001 Sum_probs=97.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCch-hhhcC------ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRS-LVLNN------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~-~lk~g------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
..+.+.-+.+++.+++.|.+-+.+=+-.. .-..| +.+.-.+=+++|++++++ -+.+.+....=-+.++-.+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~--d~~l~vDan~~~~~~~A~~ 226 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGT--KADLLFGTHGQFTVSGAKR 226 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGG--GSEEEECCCSCBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCC--CCeEEEeCCCCcCHHHHHH
Confidence 45678888889999999999988732100 00001 134445566778888865 3566666543226677777
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKD 367 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~ 367 (387)
.++...+.|.+||--+.-- -.+ +..+.+++.+ ++.|-+-+.+.+..++..++. .-.++.++++
T Consensus 227 ~~~~l~~~~i~~iEeP~~~----~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~~d 289 (404)
T 4e5t_A 227 LARRLEAYDPLWFEEPIPP----EKP-------EDMAEVARYT--SIPVATGERLCTKYEFSRVLE----TGAASILQMN 289 (404)
T ss_dssp HHHHHGGGCCSEEECCSCT----TCH-------HHHHHHHHHC--SSCEEECTTCCHHHHHHHHHH----HTCCSEECCC
T ss_pred HHHHHhhcCCcEEECCCCc----ccH-------HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH----hCCCCEEecC
Confidence 8888888999999865421 122 3455555554 466777778899999999995 3347888999
Q ss_pred cceeec-cchHHHHH
Q psy10250 368 LFRIGA-SSLLNNIL 381 (387)
Q Consensus 368 ~~RIGt-Ss~~~il~ 381 (387)
..|+|. +..+++..
T Consensus 290 ~~~~GGit~~~~ia~ 304 (404)
T 4e5t_A 290 LGRVGGLLEAKKIAA 304 (404)
T ss_dssp TTTSSCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH
Confidence 999964 55555544
No 155
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.21 E-value=0.61 Score=49.38 Aligned_cols=126 Identities=14% Similarity=0.088 Sum_probs=76.7
Q ss_pred HHHHHHHHHCCCCeeeeecCchh-----hhc---------------CChhHHHHHHHHHHHHhCCCcceEEEEeec----
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSL-----VLN---------------NQWPELFSEVKQMKEKCGEKIHMKTILAVG---- 277 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~-----lk~---------------g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---- 277 (387)
..-|+.|.+.|.|-||+=.-=|+ ++| ++...+.+=+++|+++++...++.+=|-..
T Consensus 159 ~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~ 238 (690)
T 3k30_A 159 RNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEID 238 (690)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCST
T ss_pred HHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCC
Confidence 45577888999999998332222 111 122366677788999997545555555221
Q ss_pred -cCCChHHHHHHHHHHHHcCCCEEEcCCCCC-----CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHH
Q psy10250 278 -ELKTSENIYCASMTAMFAGSDFIKTSTGKE-----KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 278 -~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~-----~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
-+ +.++....++.+.+ |+|++-.|.|.. +.....+. ...+.++.+++.+ ++.|=+.|||++.++|.++
T Consensus 239 ~g~-~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~ 312 (690)
T 3k30_A 239 GGI-TREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEG--RQEEFVAGLKKLT--TKPVVGVGRFTSPDAMVRQ 312 (690)
T ss_dssp TSC-CHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTT--TTHHHHTTSGGGC--SSCEEECSCCCCHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCcc--ccHHHHHHHHHHc--CCeEEEeCCCCCHHHHHHH
Confidence 13 34666677777766 899998887631 00001110 0112334444443 4667889999999999999
Q ss_pred HH
Q psy10250 352 IY 353 (387)
Q Consensus 352 i~ 353 (387)
+.
T Consensus 313 l~ 314 (690)
T 3k30_A 313 IK 314 (690)
T ss_dssp HH
T ss_pred HH
Confidence 94
No 156
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=91.96 E-value=6.1 Score=38.85 Aligned_cols=141 Identities=7% Similarity=0.041 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~a 295 (387)
+.+.-..+++.+++.|.+-|.+= .+ .++.+...+=+++|++++++. +.+.+... -+ +.++..+.++...+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik--~g---~~~~~~~~e~v~avR~avg~d--~~l~vDan~~~-~~~~a~~~~~~l~~~ 233 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLK--VG---QPDGALDIARVTAVRKHLGDA--VPLMVDANQQW-DRPTAQRMCRIFEPF 233 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEE--CC---CSCHHHHHHHHHHHHHHHCTT--SCEEEECTTCC-CHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe--cC---CCCHHHHHHHHHHHHHHcCCC--CEEEEECCCCC-CHHHHHHHHHHHHhh
Confidence 56777788999999999998873 22 135666777788899888753 44555543 34 667777777888888
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--+.. .... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++++..|+|. +
T Consensus 234 ~i~~iE~P~~----~~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGit 296 (393)
T 2og9_A 234 NLVWIEEPLD----AYDH-------EGHAALALQF--DTPIATGEMLTSAAEHGDLIR----HRAADYLMPDAPRVGGIT 296 (393)
T ss_dssp CCSCEECCSC----TTCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----TTCCSEECCCHHHHTSHH
T ss_pred CCCEEECCCC----cccH-------HHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHH----CCCCCEEeeCccccCCHH
Confidence 9999975432 1122 3445555554 477777788999999999995 3347888999999865 5
Q ss_pred chHHHHHH
Q psy10250 375 SLLNNILQ 382 (387)
Q Consensus 375 s~~~il~~ 382 (387)
.++++..-
T Consensus 297 ~~~~i~~~ 304 (393)
T 2og9_A 297 PFLKIASL 304 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 157
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=91.93 E-value=1.1 Score=42.94 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=61.5
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
..++.+++.|++-|.+-.. +. .+.++.+++. -+++|.-. .+.++. +.+.++|+|+|.-
T Consensus 87 ~~~~~~~~~g~d~V~~~~g-------~p---~~~~~~l~~~-----gi~vi~~v---~t~~~a----~~~~~~GaD~i~v 144 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGN-------DP---GEHIAEFRRH-----GVKVIHKC---TAVRHA----LKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHTTCCEEEEEES-------CC---HHHHHHHHHT-----TCEEEEEE---SSHHHH----HHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEcCC-------Cc---HHHHHHHHHc-----CCCEEeeC---CCHHHH----HHHHHcCCCEEEE
Confidence 3466677788887664322 22 1233444432 25666543 244433 4578899999986
Q ss_pred CCCCCCC---CCC-hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 303 STGKEKT---NAT-IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 303 STGf~~~---gat-~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
. |+..+ |.. ... .+.++.+++.+ ++.|=++|||++.+++.+++ .+|++
T Consensus 145 ~-g~~~GG~~G~~~~~~----~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al-----~~GAd 196 (328)
T 2gjl_A 145 D-GFECAGHPGEDDIPG----LVLLPAAANRL--RVPIIASGGFADGRGLVAAL-----ALGAD 196 (328)
T ss_dssp E-CTTCSBCCCSSCCCH----HHHHHHHHTTC--CSCEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred E-CCCCCcCCCCccccH----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 3 33222 221 111 12344444332 57888999999999999999 47885
No 158
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.86 E-value=0.4 Score=46.56 Aligned_cols=74 Identities=14% Similarity=0.225 Sum_probs=55.7
Q ss_pred HHHHHHHcCCCeeee--ecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEe--c---------cCCCCHHHHHHHHH
Q psy10250 15 EIELLAKQKVDEVDI--VIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILA--V---------GELKTSENIYYASM 81 (387)
Q Consensus 15 E~~~a~~~GA~EiD~--Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlE--t---------~~L~~~e~i~~a~~ 81 (387)
.+++|++.|||-+=| -+|++ +..-..-.+++.++++.|+. .-+=+++| . ... +.+.+..+++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~G---s~~e~~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~-dp~~Va~aaR 207 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLS---DAGTAPTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDL-STDAVIQSVA 207 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTT---CTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECC-SHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCC---ChhHHHHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCC-CHHHHHHHHH
Confidence 678999999999884 46766 33446777888999988864 12344555 1 123 6789999999
Q ss_pred HHHHcCCC----EEec
Q psy10250 82 TAMFAGSD----FIKT 93 (387)
Q Consensus 82 ~a~~ag~d----fvKT 93 (387)
+|.+.|+| ||||
T Consensus 208 iAaELGADs~~tivK~ 223 (307)
T 3fok_A 208 IAAGLGNDSSYTWMKL 223 (307)
T ss_dssp HHHTCSSCCSSEEEEE
T ss_pred HHHHhCCCcCCCEEEe
Confidence 99999999 9998
No 159
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=91.83 E-value=4.1 Score=38.69 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=87.6
Q ss_pred HHHHHHHHHCCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCC-CcceEEEEeecc------CCChHHHHHHH
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGE------LKTSENIYCAS 289 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~------L~t~e~i~~a~ 289 (387)
...++.|++.|++.|-+.+..+.. .....+...+.+..+++.++. +..+-+-+.+.. -.+++.+.+.+
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVT 162 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHH
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHH
Confidence 456889999999999998776543 245677788888888877753 234444443321 12578888999
Q ss_pred HHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcC-CCceEeE--eccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 290 MTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSG-KKIGLKP--AGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 290 ~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~-~~~gIKa--sGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
+.+.++|+|.| +-+.|. ++|+.+..+++.+ ++..+ -.+++.. --|.-. ..++.-+ ++|++++
T Consensus 163 ~~~~~~Ga~~i~l~DT~G~----~~P~~~~~lv~~l---~~~~~~~~i~~H~Hn~~Gla~-An~laA~-----~aGa~~v 229 (298)
T 2cw6_A 163 KKFYSMGCYEISLGDTIGV----GTPGIMKDMLSAV---MQEVPLAALAVHCHDTYGQAL-ANTLMAL-----QMGVSVV 229 (298)
T ss_dssp HHHHHTTCSEEEEEETTSC----CCHHHHHHHHHHH---HHHSCGGGEEEEEBCTTSCHH-HHHHHHH-----HTTCCEE
T ss_pred HHHHHcCCCEEEecCCCCC----cCHHHHHHHHHHH---HHhCCCCeEEEEECCCCchHH-HHHHHHH-----HhCCCEE
Confidence 99999999965 445664 6788777665544 44554 2455544 112222 2233334 5899877
Q ss_pred CCCcceee
Q psy10250 365 NKDLFRIG 372 (387)
Q Consensus 365 ~~~~~RIG 372 (387)
+....=+|
T Consensus 230 d~tv~GlG 237 (298)
T 2cw6_A 230 DSSVAGLG 237 (298)
T ss_dssp EEBTTSCC
T ss_pred Eeeccccc
Confidence 66555444
No 160
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.82 E-value=4.2 Score=42.41 Aligned_cols=134 Identities=19% Similarity=0.245 Sum_probs=89.1
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
...|++.+ |.. +--..-++..++.|+|- +||+.. .|+.+.+.+-++.+++..++ +.||-=+-.
T Consensus 269 rL~VgAAV-gv~------~d~~eR~~aLv~AGvD~--iviD~a---hGhs~~v~~~i~~ik~~~p~---~~viaGNVa-- 331 (556)
T 4af0_A 269 QLYCGAAI-GTR------PGDKDRLKLLAEAGLDV--VVLDSS---QGNSVYQIEFIKWIKQTYPK---IDVIAGNVV-- 331 (556)
T ss_dssp CBCCEEEE-CSS------HHHHHHHHHHHHTTCCE--EEECCS---CCCSHHHHHHHHHHHHHCTT---SEEEEEEEC--
T ss_pred ceeeEEEe-ccC------ccHHHHHHHHHhcCCcE--EEEecc---ccccHHHHHHHHHHHhhCCc---ceEEecccc--
Confidence 46677774 542 22344567778899986 477875 48899999999999987754 556655432
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCC-------CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKT-------NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~-------gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
|.| +++..+++|||+||-.-|=+.- |...++.-.+. ++....+ +..+.|=|=||||+.-+..+-+
T Consensus 332 T~e----~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~-~~a~~a~--~~~vpvIADGGI~~sGDi~KAl- 403 (556)
T 4af0_A 332 TRE----QAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVY-AVAEFAS--RFGIPCIADGGIGNIGHIAKAL- 403 (556)
T ss_dssp SHH----HHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHH-HHHHHHG--GGTCCEEEESCCCSHHHHHHHH-
T ss_pred CHH----HHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHH-HHHHHHH--HcCCCEEecCCcCcchHHHHHh-
Confidence 444 5566889999999987775432 23333333332 2222222 2247788999999999988888
Q ss_pred HHHHhcCCCc
Q psy10250 354 LVLIMLGPDW 363 (387)
Q Consensus 354 l~~~~~Ga~w 363 (387)
.+||++
T Consensus 404 ----aaGAd~ 409 (556)
T 4af0_A 404 ----ALGASA 409 (556)
T ss_dssp ----HTTCSE
T ss_pred ----hcCCCE
Confidence 489864
No 161
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=91.78 E-value=5.3 Score=38.74 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=68.1
Q ss_pred CCCC-CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 210 GFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 210 gFP~-G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
.||. |..+.+.-+.-++.+.+.||++|-+.=-.|.+ ....+++-++.+++..++ +.|+...=+|.-.-..-
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~p~-----~~i~~H~Hnd~GlA~AN 230 (337)
T 3ble_A 159 DWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVL---SPEETFQGVDSLIQKYPD-----IHFEFHGHNDYDLSVAN 230 (337)
T ss_dssp THHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCC---CHHHHHHHHHHHHHHCTT-----SCEEEECBCTTSCHHHH
T ss_pred ECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCc---CHHHHHHHHHHHHHhcCC-----CeEEEEecCCcchHHHH
Confidence 4553 34455666666888889999998776445543 578888888888887642 34565544444434445
Q ss_pred HHHHHHcCCCEEEcCC-CCC--CCCCChhhhHhH
Q psy10250 289 SMTAMFAGSDFIKTST-GKE--KTNATIPAGIIM 319 (387)
Q Consensus 289 ~~ia~~aGaDfVKTST-Gf~--~~gat~~~~~~m 319 (387)
+..|+++|++.|-+|- |+| .+++.+|.+..+
T Consensus 231 ~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~ 264 (337)
T 3ble_A 231 SLQAIRAGVKGLHASINGLGERAGNTPLEALVTT 264 (337)
T ss_dssp HHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHH
T ss_pred HHHHHHhCCCEEEEecccccccccchhHHHHHHH
Confidence 6789999999999875 555 356777654443
No 162
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.78 E-value=1.4 Score=41.86 Aligned_cols=128 Identities=14% Similarity=0.080 Sum_probs=68.9
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE-
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK- 301 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK- 301 (387)
.-++.+.+.|+|-+=++ +... +|...+++.++. .-++.|+=..--++++.+ -+++.. +-+||=
T Consensus 114 ~f~~~~~~aGvdgvii~-Dlp~----------ee~~~~~~~~~~-~gl~~i~liaP~t~~eri---~~i~~~-~~gfvY~ 177 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA-DVPV----------EESAPFSKAAKA-HGIAPIFIAPPNADADTL---KMVSEQ-GEGYTYL 177 (267)
T ss_dssp HHHHHHHHHTCCEEEET-TSCG----------GGCHHHHHHHHH-TTCEEECEECTTCCHHHH---HHHHHH-CCSCEEE
T ss_pred HHHHHHHHcCCCEEEeC-CCCH----------hhHHHHHHHHHH-cCCeEEEEECCCCCHHHH---HHHHHh-CCCcEEE
Confidence 34677778888886443 4332 345555655543 235666433333244433 334444 444544
Q ss_pred -cCCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchHHH
Q psy10250 302 -TSTGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNN 379 (387)
Q Consensus 302 -TSTGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~~i 379 (387)
|.+|...... ..+.+ .+-|+.+++.+ ++.|=+-|||+|.+++...+ ..|+| ..-+| |..++.
T Consensus 178 vS~~GvTG~~~~~~~~~---~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~-----~~gAD-----gvVVG-Saiv~~ 241 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPI---ENILTQLAEFN--APPPLLGFGIAEPEQVRAAI-----KAGAA-----GAISG-SAVVKI 241 (267)
T ss_dssp SCCCCCC--------CH---HHHHHHHHTTT--CCCEEECSSCCSHHHHHHHH-----HTTCS-----EEEEC-HHHHHH
T ss_pred EecCCCCCCccCCcHHH---HHHHHHHHHhc--CCCEEEECCcCCHHHHHHHH-----HcCCC-----EEEEC-HHHHHH
Confidence 4666422111 12222 23445555543 45677789999999999666 47885 35566 466666
Q ss_pred HHH
Q psy10250 380 ILQ 382 (387)
Q Consensus 380 l~~ 382 (387)
+.+
T Consensus 242 i~~ 244 (267)
T 3vnd_A 242 IEA 244 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 163
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=91.64 E-value=1.7 Score=42.56 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=80.8
Q ss_pred HHHHHHHcCCCeeeeecchhHHhcCChh----HHHHHHHHHHHHccc-CccEEEEEec---cC----CCC-------HHH
Q psy10250 15 EIELLAKQKVDEVDIVIQRSLVLNNQWP----ELFSEVKQMKEKCEE-KIHMKTILAV---GE----LKT-------SEN 75 (387)
Q Consensus 15 E~~~a~~~GA~EiD~Vin~~~lk~g~~~----~v~~ei~~v~~~~~~-~~~~KvIlEt---~~----L~~-------~e~ 75 (387)
-+++|++.|||-+=+-+|++. .+-. .-.+.+..|.+.|+. ++ =+++|. +. -.+ ++.
T Consensus 115 sve~a~~~GADAVk~lv~~g~---d~~~e~~~~q~~~l~rv~~ec~~~Gi--PlllEil~y~~~~~~~~~~~~a~~~p~~ 189 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDV---DGDPQVNVQKQAYIERIGSECQAEDI--PFFLEILTYDETISNNSSVEFAKVKVHK 189 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECT---TSCHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEECBTTBSCTTSHHHHTTHHHH
T ss_pred CHHHHHHcCCCEEEEEEEcCC---CchHHHHHHHHHHHHHHHHHHHHcCC--ceEEEEeccCCCCCCCcchhhhccCHHH
Confidence 478999999999999999974 2222 345677888888864 33 345554 11 011 344
Q ss_pred HHHHHHHH--HHcCCCEEecC-CCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccc--cCCCCCCHHHHHH
Q psy10250 76 IYYASMTA--MFAGSDFIKTS-TGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLT--TLSGDDTEAVVET 150 (387)
Q Consensus 76 i~~a~~~a--~~ag~dfvKTS-TG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T--~L~~~~T~~~i~~ 150 (387)
+..+++.+ .+.|+|++||. || ++.++-.|--..+-..+ +.-.+.++++....+.- +|..-.+.+++.+
T Consensus 190 V~~a~R~~~~~elGaDv~Kve~p~------~~~~v~g~~~~~~~y~~-~ea~~~f~~~~~a~~~P~v~lsgG~~~~~fl~ 262 (332)
T 3iv3_A 190 VNDAMKVFSAERFGIDVLKVEVPV------NMVYVEGFAEGEVVYSK-EEAAQAFREQEASTDLPYIYLSAGVSAELFQE 262 (332)
T ss_dssp HHHHHHHHTSGGGCCSEEEECCSS------CGGGBTTTCSSCCCBCH-HHHHHHHHHHHHTCSSCEEEECTTCCHHHHHH
T ss_pred HHHHHHHHhhcCcCCcEEEEecCC------ChhhhcccccccccccH-HHHHHHHHHHHhcCCCCEEEECCCCCHHHHHH
Confidence 88899999 66799999996 22 12211111000000011 22334566666666655 4788889999999
Q ss_pred HHHHhc
Q psy10250 151 LTLKAI 156 (387)
Q Consensus 151 l~~~A~ 156 (387)
.++.|.
T Consensus 263 ~v~~A~ 268 (332)
T 3iv3_A 263 TLVFAH 268 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 164
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.58 E-value=1.3 Score=47.24 Aligned_cols=129 Identities=12% Similarity=0.029 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhh-------------------cCChhHHHHHHHHHHHHhCCC--cceEEEEeec-
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVL-------------------NNQWPELFSEVKQMKEKCGEK--IHMKTILAVG- 277 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk-------------------~g~~~~v~~Ei~~v~~~~~~~--~~lKvIlEt~- 277 (387)
.=..-|+.|.+.|.|-|++=.-=|+|. .++...+.+=+++|++++++. +.+|+=....
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~ 229 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVY 229 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCc
Confidence 334557888899999999754322221 112244667778899988753 3455533211
Q ss_pred ---cCCChHHHHHHHHHHHHcCCCEEEcCCCC----CCC-CC---ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHH
Q psy10250 278 ---ELKTSENIYCASMTAMFAGSDFIKTSTGK----EKT-NA---TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFE 346 (387)
Q Consensus 278 ---~L~t~e~i~~a~~ia~~aGaDfVKTSTGf----~~~-ga---t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~ 346 (387)
=++..++....++.+.+ |+|++..|.|- ... .. ..+. . ..+.++.+++.+ ++.|=++|||+|.+
T Consensus 230 ~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~~~~--~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 230 GPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQG-H-TIPWVKLVKQVS--KKPVLGVGRYTDPE 304 (729)
T ss_dssp CTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTT-T-THHHHHHHHTTC--SSCEECCSCCCCHH
T ss_pred CCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCcc-c-cHHHHHHHHHHC--CCEEEEeCCCCCHH
Confidence 13103455566777666 79999888773 111 00 0110 0 123445555554 56788899999999
Q ss_pred HHHHHHH
Q psy10250 347 DSVRWIY 353 (387)
Q Consensus 347 ~a~~~i~ 353 (387)
+|.+++.
T Consensus 305 ~a~~~l~ 311 (729)
T 1o94_A 305 KMIEIVT 311 (729)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999994
No 165
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=91.50 E-value=0.49 Score=43.49 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=32.1
Q ss_pred ccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHH
Q psy10250 184 ARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEK 263 (387)
Q Consensus 184 ~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~ 263 (387)
...+.+++..+. .+++|... | |-.+. ..++.+++.|||- +++....+.+ .+.+ .++++.
T Consensus 66 ~~~~~i~~i~~~----~~ipvi~~--G---gi~~~----~~~~~~l~~Gad~--V~ig~~~l~d--p~~~----~~~~~~ 124 (247)
T 3tdn_A 66 YDTEMIRFVRPL----TTLPIIAS--G---GAGKM----EHFLEAFLRGADK--VSINTAAVEN--PSLI----TQIAQT 124 (247)
T ss_dssp CCHHHHHHHGGG----CCSCEEEE--S---CCCSH----HHHHHHHHTTCSE--ECCSHHHHHC--THHH----HHHHHH
T ss_pred ccHHHHHHHHHh----CCCCEEEe--C---CCCCH----HHHHHHHHcCCCe--eehhhHHhhC--hHHH----HHHHHH
Confidence 346666665543 46777555 2 22232 4577888899776 3566666653 3322 222222
Q ss_pred hCCC-----cce-------EEEEeeccCCChHHHHHHHHHHHHcCCCEEE-cCCCCC--CCCCChhhhHhHHHHHHHHHH
Q psy10250 264 CGEK-----IHM-------KTILAVGELKTSENIYCASMTAMFAGSDFIK-TSTGKE--KTNATIPAGIIMCSAIKHFHK 328 (387)
Q Consensus 264 ~~~~-----~~l-------KvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK-TSTGf~--~~gat~~~~~~m~~~v~~~~~ 328 (387)
.+.. ..+ +|-+.-..-.+.......++.+.+.|+++|= |++... ..|..++ .++.+++
T Consensus 125 ~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~~~-------~~~~i~~ 197 (247)
T 3tdn_A 125 FGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTE-------MIRFVRP 197 (247)
T ss_dssp HC------------------------------------------------------------------------------
T ss_pred hCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCCHH-------HHHHHHH
Confidence 2210 011 2222210000112233456667788999774 332111 1122232 3344444
Q ss_pred HcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 329 LSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 329 ~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.+ ++.|=++|||+|.+++..++ .+|++
T Consensus 198 ~~--~iPvia~GGI~~~~d~~~~~-----~~Gad 224 (247)
T 3tdn_A 198 LT--TLPIIASGGAGKMEHFLEAF-----LRGAD 224 (247)
T ss_dssp ----------------------------------
T ss_pred hC--CCCEEEECCCCCHHHHHHHH-----HcCCc
Confidence 32 46677899999999999999 46874
No 166
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=91.48 E-value=4.6 Score=39.92 Aligned_cols=192 Identities=13% Similarity=0.116 Sum_probs=113.6
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-CCccHHHHHHH---hhhcCCCCCceEEEEecCCCCCC
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-YPARVVDVIKV---LDRENARDDVKVASVAAGFPSGQ 215 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-~P~~v~~a~~~---L~~~~~~~~v~v~tVvigFP~G~ 215 (387)
....+.++..++++.-. +.|+..+=+ +|.+.+.-.+. +... +...++++..-+
T Consensus 19 ~~~~~~~~k~~ia~~L~----------------~~Gv~~IE~g~p~~~~~~~~~~~~i~~~--~~~~~v~~~~r~----- 75 (382)
T 2ztj_A 19 KANFSTQDKVEIAKALD----------------EFGIEYIEVTTPVASPQSRKDAEVLASL--GLKAKVVTHIQC----- 75 (382)
T ss_dssp TCCCCHHHHHHHHHHHH----------------HHTCSEEEECCTTSCHHHHHHHHHHHTS--CCSSEEEEEEES-----
T ss_pred CCCcCHHHHHHHHHHHH----------------HcCcCEEEEcCCcCCHHHHHHHHHHHhc--CCCcEEEEEccc-----
Confidence 34567777777776665 456767766 57666654333 3322 234555544211
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhh----hcCChhHHHHHHHHHHHHhCC-C--cceEEEEeeccCCChHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLV----LNNQWPELFSEVKQMKEKCGE-K--IHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l----k~g~~~~v~~Ei~~v~~~~~~-~--~~lKvIlEt~~L~t~e~i~~a 288 (387)
....++.|++.|++.|.+++..+.+ ...+.+++.+.+...++.+.. + ..+-+=+|.+.-.+++.+.+.
T Consensus 76 -----~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~ 150 (382)
T 2ztj_A 76 -----RLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAV 150 (382)
T ss_dssp -----CHHHHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHH
T ss_pred -----ChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHH
Confidence 1233688999999999998766542 122456666666666666542 2 455666687777677888899
Q ss_pred HHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHc--CCCceEeEe--ccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 289 SMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLS--GKKIGLKPA--GGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 289 ~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~--~~~~gIKas--GGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++.+.++ +|.| +-..|. ++|..+..+++.++ +.. +-.+++-.= -|--..+ ++.-+ ++|++
T Consensus 151 ~~~~~~~-a~~i~l~DT~G~----~~P~~~~~lv~~l~---~~~~~~~~i~~H~Hnd~GlAvAN-~laAv-----~aGa~ 216 (382)
T 2ztj_A 151 YEAVAPY-VDRVGLADTVGV----ATPRQVYALVREVR---RVVGPRVDIEFHGHNDTGCAIAN-AYEAI-----EAGAT 216 (382)
T ss_dssp HHHHGGG-CSEEEEEETTSC----CCHHHHHHHHHHHH---HHHTTTSEEEEEEBCTTSCHHHH-HHHHH-----HTTCC
T ss_pred HHHHHHh-cCEEEecCCCCC----CCHHHHHHHHHHHH---HhcCCCCeEEEEeCCCccHHHHH-HHHHH-----HhCCC
Confidence 9999999 9965 446665 67887776665554 442 233444431 2322222 22223 58998
Q ss_pred ccCCCcceeec
Q psy10250 363 WLNKDLFRIGA 373 (387)
Q Consensus 363 w~~~~~~RIGt 373 (387)
+++....=+|-
T Consensus 217 ~vd~tv~GlGe 227 (382)
T 2ztj_A 217 HVDTTILGIGE 227 (382)
T ss_dssp EEEEBGGGCSS
T ss_pred EEEEccccccc
Confidence 77665555554
No 167
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=91.47 E-value=0.4 Score=46.05 Aligned_cols=91 Identities=10% Similarity=0.198 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
+.+=+++.++.++. . |+++|+.- .++...| .++|+|+|---+ .+++. |.+.++.++.. ..
T Consensus 181 i~~av~~ar~~~~~--~-~I~Vev~t---~eea~ea----l~aGaD~I~LDn------~~~~~---~~~~v~~l~~~-~~ 240 (284)
T 1qpo_A 181 VVDALRAVRNAAPD--L-PCEVEVDS---LEQLDAV----LPEKPELILLDN------FAVWQ---TQTAVQRRDSR-AP 240 (284)
T ss_dssp HHHHHHHHHHHCTT--S-CEEEEESS---HHHHHHH----GGGCCSEEEEET------CCHHH---HHHHHHHHHHH-CT
T ss_pred HHHHHHHHHHhCCC--C-CEEEEeCC---HHHHHHH----HHcCCCEEEECC------CCHHH---HHHHHHHhhcc-CC
Confidence 34556666665554 3 99998873 4566544 558999986433 35553 33445554433 35
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccch
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 376 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~ 376 (387)
++.|=+|||| |++.+.+|. ..|+ +.|++|++
T Consensus 241 ~v~ieaSGGI-t~~~i~~~a-----~tGV-------D~isvG~l 271 (284)
T 1qpo_A 241 TVMLESSGGL-SLQTAATYA-----ETGV-------DYLAVGAL 271 (284)
T ss_dssp TCEEEEESSC-CTTTHHHHH-----HTTC-------SEEECGGG
T ss_pred CeEEEEECCC-CHHHHHHHH-----hcCC-------CEEEECHH
Confidence 7899999999 688888998 5898 57777663
No 168
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=91.42 E-value=5.4 Score=40.10 Aligned_cols=161 Identities=7% Similarity=-0.001 Sum_probs=106.7
Q ss_pred CCceEEEEecCCCCCC-------CCHHHHHHHHHHHHHCCCCeeeeecCc-hhhhcC------ChhHHHHHHHHHHHHhC
Q psy10250 200 DDVKVASVAAGFPSGQ-------YLLETRLHEIELLAKQKVDEVDIVIQR-SLVLNN------QWPELFSEVKQMKEKCG 265 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~-------~~~e~K~~Ea~~Ai~~GAdEID~Vin~-~~lk~g------~~~~v~~Ei~~v~~~~~ 265 (387)
..+++-+. .||.+. .+.+.-+.+++.+++.|.+-+-+=+.- +..+.| +.+...+=+++|+++++
T Consensus 124 ~~v~~y~~--~~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG 201 (433)
T 3rcy_A 124 PRIRAYTY--LYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVG 201 (433)
T ss_dssp SSEEEEEE--CCCCTTSCHHHHTTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEE--EcccCCcccccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhC
Confidence 35666554 477533 678888899999999999998873321 111112 23445556778888887
Q ss_pred CCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCH
Q psy10250 266 EKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTF 345 (387)
Q Consensus 266 ~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~ 345 (387)
+ -+.+.+....=-+.++-.+.++...+.|.+||--+.- +++ .+..+.+++.+ .+.|=+-+.+.+.
T Consensus 202 ~--d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~~-------~~~----~~~~~~l~~~~--~iPIa~dE~~~~~ 266 (433)
T 3rcy_A 202 D--KADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVP-------PDN----VGAMAQVARAV--RIPVATGERLTTK 266 (433)
T ss_dssp T--SSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSC-------TTC----HHHHHHHHHHS--SSCEEECTTCCSH
T ss_pred C--CCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECCCC-------hhh----HHHHHHHHhcc--CCCEEecCCCCCH
Confidence 5 3566776543226677777788888899999986542 111 13455566553 4667677789999
Q ss_pred HHHHHHHHHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 346 EDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 346 ~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.++..++. .-+++.++++..|+|. +.++++..
T Consensus 267 ~~~~~~l~----~g~~D~v~~d~~~~GGit~~~kia~ 299 (433)
T 3rcy_A 267 AEFAPVLR----EGAAAILQPALGRAGGIWEMKKVAA 299 (433)
T ss_dssp HHHHHHHH----TTCCSEECCCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHH----cCCCCEEEeCchhcCCHHHHHHHHH
Confidence 99999995 2347888999999964 55555543
No 169
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=91.39 E-value=7.5 Score=38.14 Aligned_cols=140 Identities=13% Similarity=0.100 Sum_probs=96.6
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCC-hhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQ-WPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAM 293 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~-~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~ 293 (387)
.+.+.-..+++.+.+.|.+-|.+ +.+ .+ .+...+=+++|++++++. +.+.+... -+ +.++..+.++...
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKi--k~g----~~~~~~~~e~v~avR~a~G~d--~~l~vDan~~~-~~~~a~~~~~~l~ 218 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKI--YPM----LDSLSISIQFVEKVREIVGDE--LPLMLDLAVPE-DLDQTKSFLKEVS 218 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEE--CCC----CSSHHHHHHHHHHHHHHHCSS--SCEEEECCCCS-CHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--ccC----CChHHHHHHHHHHHHHHhCCC--CEEEEEcCCCC-CHHHHHHHHHHHH
Confidence 45677778899999999998884 333 12 456667788888888753 44555543 34 5677777788888
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
+.|++||--+.- .... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++++..++|.
T Consensus 219 ~~~i~~iEqP~~----~~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GG 281 (391)
T 2qgy_A 219 SFNPYWIEEPVD----GENI-------SLLTEIKNTF--NMKVVTGEKQSGLVHFRELIS----RNAADIFNPDISGMGG 281 (391)
T ss_dssp GGCCSEEECSSC----TTCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----TTCCSEECCBTTTSSC
T ss_pred hcCCCeEeCCCC----hhhH-------HHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHH----cCCCCEEEECcchhCC
Confidence 899999985431 1122 3455555554 577877888999999999995 3447888899999965
Q ss_pred -cchHHHHH
Q psy10250 374 -SSLLNNIL 381 (387)
Q Consensus 374 -Ss~~~il~ 381 (387)
+..+++..
T Consensus 282 it~~~~i~~ 290 (391)
T 2qgy_A 282 LIDIIEISN 290 (391)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 44555543
No 170
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=91.38 E-value=1.7 Score=44.28 Aligned_cols=116 Identities=18% Similarity=0.210 Sum_probs=70.9
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEE-eeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-AVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIl-Et~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
..++...++.|+|-+ |++- ..|....+.+.++.+++... +.+|. +.+ +.+. ++.+. |+|+|
T Consensus 230 ~~~a~~l~~~gvd~l--vvdt---a~G~~~~~L~~I~~l~~~~~----vpvi~k~v~---~~~~----a~~l~--G~d~v 291 (486)
T 2cu0_A 230 IKRAIELDKAGVDVI--VVDT---AHAHNLKAIKSMKEMRQKVD----ADFIVGNIA---NPKA----VDDLT--FADAV 291 (486)
T ss_dssp HHHHHHHHHTTCSEE--EEEC---SCCCCHHHHHHHHHHHHTCC----SEEEEEEEC---CHHH----HTTCT--TSSEE
T ss_pred HHHHHHHHHhcCCce--EEEe---cCCcEeehhhHHHHHHHHhC----CccccCCcC---CHHH----HHHhh--CCCeE
Confidence 456778889999875 3333 35777788888888887552 34453 222 4332 22233 99999
Q ss_pred EcCCCCCCC-------CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 301 KTSTGKEKT-------NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 301 KTSTGf~~~-------gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
+...|.+.. |...+....+ ..++.+.+.. ++.|=++|||++..++.+.+ .+||+.
T Consensus 292 ~vg~g~g~~~~~r~~~~~g~~~~~~l-~~~~~~~~~~--~vpVia~GGi~~~~di~kal-----alGA~~ 353 (486)
T 2cu0_A 292 KVGIGPGSICTTRIVAGVGVPQITAV-AMVADRAQEY--GLYVIADGGIRYSGDIVKAI-----AAGADA 353 (486)
T ss_dssp EECSSCSTTBCHHHHTCCCCCHHHHH-HHHHHHHHHH--TCEEEEESCCCSHHHHHHHH-----HTTCSE
T ss_pred EEeeeeccceeeeEEeecCcchHHHH-HHHHHHHHHc--CCcEEecCCCCCHHHHHHHH-----HcCCCc
Confidence 985444321 1111111111 2333333333 57899999999999999999 489963
No 171
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=91.31 E-value=1.2 Score=40.30 Aligned_cols=62 Identities=13% Similarity=0.110 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCEEE-cCC--CCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc---C
Q psy10250 287 CASMTAMFAGSDFIK-TST--GKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML---G 360 (387)
Q Consensus 287 ~a~~ia~~aGaDfVK-TST--Gf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~---G 360 (387)
..++.+.+.|++.|= |+. ++...|..++ .++.+++. .++.|=++|||++.+++.+++ .+ |
T Consensus 153 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~-------~~~~l~~~--~~ipvia~GGI~~~~d~~~~~-----~~~~~G 218 (244)
T 2y88_A 153 DVLERLDSEGCSRFVVTDITKDGTLGGPNLD-------LLAGVADR--TDAPVIASGGVSSLDDLRAIA-----TLTHRG 218 (244)
T ss_dssp HHHHHHHHTTCCCEEEEETTTTTTTSCCCHH-------HHHHHHTT--CSSCEEEESCCCSHHHHHHHH-----TTGGGT
T ss_pred HHHHHHHhCCCCEEEEEecCCccccCCCCHH-------HHHHHHHh--CCCCEEEECCCCCHHHHHHHH-----hhccCC
Confidence 445667788999653 432 1122233443 44455443 367888999999999999999 46 8
Q ss_pred CC
Q psy10250 361 PD 362 (387)
Q Consensus 361 a~ 362 (387)
++
T Consensus 219 ad 220 (244)
T 2y88_A 219 VE 220 (244)
T ss_dssp EE
T ss_pred CC
Confidence 74
No 172
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.25 E-value=1.1 Score=43.28 Aligned_cols=103 Identities=18% Similarity=0.236 Sum_probs=59.2
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST 304 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST 304 (387)
++.+++.|+|-|.+-.. ....+ ++.+++ . + +++|+-. .+.++ ++.+.++|+|||.-+
T Consensus 81 ~~~a~~~g~d~V~~~~g-------~p~~~---i~~l~~-~-g---~~v~~~v---~~~~~----a~~~~~~GaD~i~v~- 137 (332)
T 2z6i_A 81 VDLVIEEGVKVVTTGAG-------NPSKY---MERFHE-A-G---IIVIPVV---PSVAL----AKRMEKIGADAVIAE- 137 (332)
T ss_dssp HHHHHHTTCSEEEECSS-------CGGGT---HHHHHH-T-T---CEEEEEE---SSHHH----HHHHHHTTCSCEEEE-
T ss_pred HHHHHHCCCCEEEECCC-------ChHHH---HHHHHH-c-C---CeEEEEe---CCHHH----HHHHHHcCCCEEEEE-
Confidence 55566667766554322 11222 334443 2 2 4555543 34343 345678999999874
Q ss_pred CCCCC---CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 305 GKEKT---NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 305 Gf~~~---gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|...+ |... . .+-++.+++.+ ++.|=++|||+|.+++.+++ .+|++
T Consensus 138 g~~~GG~~g~~~-~----~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al-----~~GAd 186 (332)
T 2z6i_A 138 GMEAGGHIGKLT-T----MTLVRQVATAI--SIPVIAAGGIADGEGAAAGF-----MLGAE 186 (332)
T ss_dssp CTTSSEECCSSC-H----HHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred CCCCCCCCCCcc-H----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 32221 2111 1 13445555544 57788999999999999999 48985
No 173
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=90.93 E-value=6.4 Score=34.96 Aligned_cols=60 Identities=22% Similarity=0.317 Sum_probs=36.9
Q ss_pred HHHcCCCEEEcCCCCC---CCC-CChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 292 AMFAGSDFIKTSTGKE---KTN-ATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 292 a~~aGaDfVKTSTGf~---~~g-at~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.+.|+|||.-|+-|. ..+ ..+.. .+.++.+++..+ ++.|=++|||. .+++.+++ .+|++
T Consensus 132 a~~~g~d~v~~~~v~~t~~~~~~~~~~~----~~~l~~~~~~~~-~~pvia~GGI~-~~nv~~~~-----~~Ga~ 195 (227)
T 2tps_A 132 AEEDGADYVGLGPIYPTETKKDTRAVQG----VSLIEAVRRQGI-SIPIVGIGGIT-IDNAAPVI-----QAGAD 195 (227)
T ss_dssp HHHHTCSEEEECCSSCCCSSSSCCCCCT----THHHHHHHHTTC-CCCEEEESSCC-TTTSHHHH-----HTTCS
T ss_pred HHhCCCCEEEECCCcCCCCCCCCCCccC----HHHHHHHHHhCC-CCCEEEEcCCC-HHHHHHHH-----HcCCC
Confidence 5578999999533221 111 11111 134555555443 47788999999 89998888 47884
No 174
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=90.92 E-value=5.1 Score=39.32 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=99.8
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-EL 279 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L 279 (387)
.+++-+. +|+ ..+.+.-..+++.+.+.|.+-+.+ +.+. .+.+. .+=+++|++++++. +.+.+... -+
T Consensus 152 ~vp~~~~-~g~---~~~~e~~~~~a~~~~~~Gf~~vKi--k~g~---~~~~~-~e~v~avr~a~g~d--~~l~vDan~~~ 219 (388)
T 2nql_A 152 SFPAYVS-GLP---ERTLKARGELAKYWQDRGFNAFKF--ATPV---ADDGP-AAEIANLRQVLGPQ--AKIAADMHWNQ 219 (388)
T ss_dssp EEEEEEE-CCC---CSSHHHHHHHHHHHHHTTCCEEEE--EGGG---CTTCH-HHHHHHHHHHHCTT--SEEEEECCSCS
T ss_pred ceEeeEE-eCC---CCCHHHHHHHHHHHHHhCCCEEEE--eCCC---CChHH-HHHHHHHHHHhCCC--CEEEEECCCCC
Confidence 4565554 342 136677788899999999999985 4442 35667 78889999988752 45556643 34
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
+.++..+.++...+.|++||--+... ... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-
T Consensus 220 -~~~~a~~~~~~l~~~~i~~iEqP~~~----~d~-------~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~----~~ 281 (388)
T 2nql_A 220 -TPERALELIAEMQPFDPWFAEAPVWT----EDI-------AGLEKVSKNT--DVPIAVGEEWRTHWDMRARIE----RC 281 (388)
T ss_dssp -CHHHHHHHHHHHGGGCCSCEECCSCT----TCH-------HHHHHHHTSC--CSCEEECTTCCSHHHHHHHHT----TS
T ss_pred -CHHHHHHHHHHHhhcCCCEEECCCCh----hhH-------HHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHH----cC
Confidence 56777777788888999999755321 122 3444454432 567777788999999999994 33
Q ss_pred CCCccCCCcceeecc-chHHHH
Q psy10250 360 GPDWLNKDLFRIGAS-SLLNNI 380 (387)
Q Consensus 360 Ga~w~~~~~~RIGtS-s~~~il 380 (387)
+++.+..+..+ |.= ..+++.
T Consensus 282 ~~d~v~ik~~~-GGit~~~~i~ 302 (388)
T 2nql_A 282 RIAIVQPEMGH-KGITNFIRIG 302 (388)
T ss_dssp CCSEECCCHHH-HCHHHHHHHH
T ss_pred CCCEEEecCCC-CCHHHHHHHH
Confidence 47777888888 763 344443
No 175
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.89 E-value=1.4 Score=46.00 Aligned_cols=141 Identities=14% Similarity=0.155 Sum_probs=86.1
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC--CccHHHHHHHh---hhcCCCCCceEEEEecCCCCCCC-CHHH
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY--PARVVDVIKVL---DRENARDDVKVASVAAGFPSGQY-LLET 220 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~--P~~v~~a~~~L---~~~~~~~~v~v~tVvigFP~G~~-~~e~ 220 (387)
-++..++.+. +.+...|.|. -+.+..+++.. +. .+..+-.. ++|-.|.- +.+.
T Consensus 118 v~~~~ve~a~----------------~aGvd~vrIf~s~sd~~ni~~~i~~ak~----~G~~v~~~-i~~~~~~~~~~e~ 176 (539)
T 1rqb_A 118 VVDRFVDKSA----------------ENGMDVFRVFDAMNDPRNMAHAMAAVKK----AGKHAQGT-ICYTISPVHTVEG 176 (539)
T ss_dssp HHHHHHHHHH----------------HTTCCEEEECCTTCCTHHHHHHHHHHHH----TTCEEEEE-EECCCSTTCCHHH
T ss_pred ccHHHHHHHH----------------hCCCCEEEEEEehhHHHHHHHHHHHHHH----CCCeEEEE-EEeeeCCCCCHHH
Confidence 3566777776 3455545544 44444444333 33 34555444 35544433 4565
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
=+.-++.+.+.||+.|-+.=-.|.+ ....+++-++.+++..++ .+.|+...=+|...-...+..|+++|||.|
T Consensus 177 ~~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~~p~----~i~I~~H~Hnd~GlAvAN~laAveAGa~~V 249 (539)
T 1rqb_A 177 YVKLAGQLLDMGADSIALKDMAALL---KPQPAYDIIKAIKDTYGQ----KTQINLHCHSTTGVTEVSLMKAIEAGVDVV 249 (539)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHHCT----TCCEEEEEBCTTSCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCc---CHHHHHHHHHHHHHhcCC----CceEEEEeCCCCChHHHHHHHHHHhCCCEE
Confidence 5666888889999987666444543 478888888888887752 134555544444444455778999999999
Q ss_pred EcCC-CCCC--CCCChhh
Q psy10250 301 KTST-GKEK--TNATIPA 315 (387)
Q Consensus 301 KTST-Gf~~--~gat~~~ 315 (387)
-+|- |++. +++.++.
T Consensus 250 D~ti~g~GertGN~~lE~ 267 (539)
T 1rqb_A 250 DTAISSMSLGPGHNPTES 267 (539)
T ss_dssp EEBCGGGCSTTSBCBHHH
T ss_pred EEeccccCCCccChhHHH
Confidence 9875 5543 4565653
No 176
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=90.86 E-value=6.1 Score=38.78 Aligned_cols=156 Identities=10% Similarity=-0.013 Sum_probs=100.4
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++-+. .++.+...+.+.-..+++.+++.|.+-+.+ +++. ++.+...+=+++|++++++ -+++.+....--
T Consensus 150 ~v~~y~~-~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKi--k~g~---~~~~~~~e~v~avr~a~g~--~~~l~vDan~~~ 221 (392)
T 1tzz_A 150 RVFVYAA-GGYYYPGKGLSMLRGEMRGYLDRGYNVVKM--KIGG---APIEEDRMRIEAVLEEIGK--DAQLAVDANGRF 221 (392)
T ss_dssp EEEEEEE-CCCC----CHHHHHHHHHHHHTTTCSEEEE--ECSS---SCHHHHHHHHHHHHHHHTT--TCEEEEECTTCC
T ss_pred CeeEEEe-CCcccCCCCHHHHHHHHHHHHHcCCCEEEE--cCCC---CCHHHHHHHHHHHHHhcCC--CCeEEEECCCCC
Confidence 4565444 344322235677778899999999998884 3331 3556666778888888865 356666654322
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
+.++-.+.++...+.|.+||--..- +++. +..+.+++.+ ++.|=+-+.+.+.+++..++. .|
T Consensus 222 ~~~~a~~~~~~l~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~-----~~ 283 (392)
T 1tzz_A 222 NLETGIAYAKMLRDYPLFWYEEVGD-------PLDY----ALQAALAEFY--PGPMATGENLFSHQDARNLLR-----YG 283 (392)
T ss_dssp CHHHHHHHHHHHTTSCCSEEECCSC-------TTCH----HHHHHHTTTC--CSCEEECTTCCSHHHHHHHHH-----HS
T ss_pred CHHHHHHHHHHHHHcCCCeecCCCC-------hhhH----HHHHHHHhhC--CCCEEECCCCCCHHHHHHHHH-----cC
Confidence 5677777777788889999975431 1211 2333343322 466666667899999999994 55
Q ss_pred -----CCccCCCcceeec-cchHHHHHH
Q psy10250 361 -----PDWLNKDLFRIGA-SSLLNNILQ 382 (387)
Q Consensus 361 -----a~w~~~~~~RIGt-Ss~~~il~~ 382 (387)
++.++++..|+|. +..+++..-
T Consensus 284 ~~~~~~d~v~ik~~~~GGit~~~~i~~~ 311 (392)
T 1tzz_A 284 GMRPDRDWLQFDCALSYGLCEYQRTLEV 311 (392)
T ss_dssp CCCTTTCEECCCTTTTTCHHHHHHHHHH
T ss_pred CCccCCcEEEECccccCCHHHHHHHHHH
Confidence 8888999999965 555555543
No 177
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=90.76 E-value=3.1 Score=40.70 Aligned_cols=139 Identities=8% Similarity=0.036 Sum_probs=94.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
..+.+.-..+++.+.+.|.+-|.+ +.+. +.+...+=+++|++++++. +.+.+....--+.++..+.++...+
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKi--k~g~----~~~~~~e~v~avr~a~g~d--~~l~vDan~~~~~~~a~~~~~~l~~ 214 (379)
T 2rdx_A 143 QRSEAETRAELARHRAAGYRQFQI--KVGA----DWQSDIDRIRACLPLLEPG--EKAMADANQGWRVDNAIRLARATRD 214 (379)
T ss_dssp CSCSHHHHHHHHHHHHTTCCEEEE--ECCS----CHHHHHHHHHHHGGGSCTT--CEEEEECTTCSCHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE--eccC----CHHHHHHHHHHHHHhcCCC--CEEEEECCCCCCHHHHHHHHHHHHh
Confidence 345677788899999999999986 3332 4555666677888877642 4555664322256766677777778
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|+ ||--+. . .. +..+.+++.+ ++.|=+-+.+.+.+++..++. .-+++.++.+..++|.
T Consensus 215 ~~i-~iE~P~-----~-~~-------~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~----~~~~d~v~ik~~~~GGi 274 (379)
T 2rdx_A 215 LDY-ILEQPC-----R-SY-------EECQQVRRVA--DQPMKLDECVTGLHMAQRIVA----DRGAEICCLKISNLGGL 274 (379)
T ss_dssp SCC-EEECCS-----S-SH-------HHHHHHHTTC--CSCEEECTTCCSHHHHHHHHH----HTCCSEEEEETTTTTSH
T ss_pred CCe-EEeCCc-----C-CH-------HHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHH----cCCCCEEEEeccccCCH
Confidence 899 996432 1 23 3455555433 567777788999999999995 3457778888888865
Q ss_pred cchHHHHH
Q psy10250 374 SSLLNNIL 381 (387)
Q Consensus 374 Ss~~~il~ 381 (387)
+..+++..
T Consensus 275 t~~~~i~~ 282 (379)
T 2rdx_A 275 SKARRTRD 282 (379)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555544
No 178
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=90.66 E-value=4.5 Score=38.80 Aligned_cols=84 Identities=19% Similarity=0.155 Sum_probs=49.2
Q ss_pred cCCChHHHHHHHHHHHHcCCCEEEcCCCCCC-------CCCChhh-hHhHHHHHHHHHHHcCCCceEeE-eccCCCHHHH
Q psy10250 278 ELKTSENIYCASMTAMFAGSDFIKTSTGKEK-------TNATIPA-GIIMCSAIKHFHKLSGKKIGLKP-AGGISTFEDS 348 (387)
Q Consensus 278 ~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~-------~gat~~~-~~~m~~~v~~~~~~~~~~~gIKa-sGGIrt~~~a 348 (387)
+-.+.++.. ...++|+|+|--=-|+.. ...+.++ ...+-+.++..++ ..+.+.|=. +|||.+.+|+
T Consensus 169 ~v~~~eeA~----amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~-vnpdvivLc~gGpIstpeDv 243 (286)
T 2p10_A 169 YVFSPEDAV----AMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAART-IRDDIIILSHGGPIANPEDA 243 (286)
T ss_dssp EECSHHHHH----HHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHH-HCSCCEEEEESTTCCSHHHH
T ss_pred ecCCHHHHH----HHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHH-hCCCcEEEecCCCCCCHHHH
Confidence 444655543 346899999875444311 1235555 4444333333344 344554444 5599999999
Q ss_pred HHHHHHHHHhc--CCCccCCCcceeeccchH
Q psy10250 349 VRWIYLVLIML--GPDWLNKDLFRIGASSLL 377 (387)
Q Consensus 349 ~~~i~l~~~~~--Ga~w~~~~~~RIGtSs~~ 377 (387)
...++ + |++ --+|+|+..
T Consensus 244 ~~~l~-----~t~G~~------G~~gASsie 263 (286)
T 2p10_A 244 RFILD-----SCQGCH------GFYGASSME 263 (286)
T ss_dssp HHHHH-----HCTTCC------EEEESHHHH
T ss_pred HHHHh-----cCCCcc------EEEeehhhh
Confidence 99995 5 663 457888743
No 179
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=90.45 E-value=10 Score=37.39 Aligned_cols=141 Identities=11% Similarity=0.173 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~a 295 (387)
+.+.-..+++.+.+.|.+-+.+ .++ .++.+...+=+++|++++++. +.+.+... -+ +.++..+.++...+.
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKi--k~g---~~~~~~d~e~v~avR~avG~d--~~l~vDan~~~-~~~~ai~~~~~l~~~ 246 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKL--KVG---QPNCAEDIRRLTAVREALGDE--FPLMVDANQQW-DRETAIRMGRKMEQF 246 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEE--ECC---CSCHHHHHHHHHHHHHHHCSS--SCEEEECTTCS-CHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHhCCCeEEE--ecC---CCCHHHHHHHHHHHHHHcCCC--CeEEEECCCCC-CHHHHHHHHHHHHHc
Confidence 5676778899999999999887 222 135666677788888888653 44556653 34 567777777878889
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--+..- ... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++++..|+|. +
T Consensus 247 ~i~~iEqP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 247 NLIWIEEPLDA----YDI-------EGHAQLAAAL--DTPIATGEMLTSFREHEQLIL----GNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp TCSCEECCSCT----TCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----TTCCSEECCCHHHHTSHH
T ss_pred CCceeeCCCCh----hhH-------HHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH----cCCCCEEEeCccccCCHH
Confidence 99999865421 122 3445555554 466777778999999999995 3347888999999965 5
Q ss_pred chHHHHHH
Q psy10250 375 SLLNNILQ 382 (387)
Q Consensus 375 s~~~il~~ 382 (387)
..+++..-
T Consensus 310 e~~~i~~~ 317 (398)
T 2pp0_A 310 PFLKIMDL 317 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 180
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.42 E-value=2.1 Score=43.69 Aligned_cols=140 Identities=15% Similarity=0.124 Sum_probs=85.6
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC--CccHHHHHHH---hhhcCCCCCceEEEEecCCCCCCC-CHHH
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY--PARVVDVIKV---LDRENARDDVKVASVAAGFPSGQY-LLET 220 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~--P~~v~~a~~~---L~~~~~~~~v~v~tVvigFP~G~~-~~e~ 220 (387)
-++..++.+. +.++..|+|. -+.+..++.. .+. .+..+-.. ++|=.|.- +.+.
T Consensus 101 v~~~~v~~a~----------------~~Gvd~i~if~~~sd~~ni~~~i~~ak~----~G~~v~~~-i~~~~~~~~~~e~ 159 (464)
T 2nx9_A 101 VVDTFVERAV----------------KNGMDVFRVFDAMNDVRNMQQALQAVKK----MGAHAQGT-LCYTTSPVHNLQT 159 (464)
T ss_dssp HHHHHHHHHH----------------HTTCCEEEECCTTCCTHHHHHHHHHHHH----TTCEEEEE-EECCCCTTCCHHH
T ss_pred hhHHHHHHHH----------------hCCcCEEEEEEecCHHHHHHHHHHHHHH----CCCEEEEE-EEeeeCCCCCHHH
Confidence 3566777776 3455555554 3344444333 333 34555444 35554544 4566
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
=+.-++.+.+.||+.|-+.=-.|.+ ....+++=++++++.. .+.|+...=+|...-..-+..|+++|||.|
T Consensus 160 ~~~~a~~l~~~Gad~I~l~DT~G~~---~P~~v~~lv~~l~~~~------~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 160 WVDVAQQLAELGVDSIALKDMAGIL---TPYAAEELVSTLKKQV------DVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCC---CHHHHHHHHHHHHHHC------CSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCCCc---CHHHHHHHHHHHHHhc------CCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 6666888999999988766344543 4777888888888755 234555544444434445678999999999
Q ss_pred EcCC-CCCC--CCCChhhh
Q psy10250 301 KTST-GKEK--TNATIPAG 316 (387)
Q Consensus 301 KTST-Gf~~--~gat~~~~ 316 (387)
-+|- |++. +++.++.+
T Consensus 231 D~ti~g~gertGN~~lE~l 249 (464)
T 2nx9_A 231 DTAISSMSGTYGHPATESL 249 (464)
T ss_dssp EEBCGGGCSTTSCCBHHHH
T ss_pred EEeccccCCCCcCHHHHHH
Confidence 9876 4543 45666543
No 181
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=90.32 E-value=2.2 Score=38.80 Aligned_cols=124 Identities=16% Similarity=0.183 Sum_probs=67.6
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCC---cceEE-------EEeeccCCC--hHHHHHHHH
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK---IHMKT-------ILAVGELKT--SENIYCASM 290 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~---~~lKv-------IlEt~~L~t--~e~i~~a~~ 290 (387)
..++.+++.|||-+ ++....+.+ .+. +.++.+..+.. ..+.+ .+++.-... .......++
T Consensus 87 ~~~~~~~~~Gad~V--~lg~~~l~~--p~~----~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~ 158 (253)
T 1thf_D 87 ETASELILRGADKV--SINTAAVEN--PSL----ITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVV 158 (253)
T ss_dssp HHHHHHHHTTCSEE--EESHHHHHC--THH----HHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH
T ss_pred HHHHHHHHcCCCEE--EEChHHHhC--hHH----HHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHH
Confidence 45888888999865 455555543 322 33343333310 11121 333322210 001223445
Q ss_pred HHHHcCCCE-EEcCCCCC--CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCC
Q psy10250 291 TAMFAGSDF-IKTSTGKE--KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKD 367 (387)
Q Consensus 291 ia~~aGaDf-VKTSTGf~--~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~ 367 (387)
.+.+.|++. +=|++.-. ..|..+ +.++.+++.+ .+.|=++|||++.+++..++ .+|++
T Consensus 159 ~~~~~G~~~i~~~~~~~~g~~~g~~~-------~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~-----~~Gad----- 219 (253)
T 1thf_D 159 EVEKRGAGEILLTSIDRDGTKSGYDT-------EMIRFVRPLT--TLPIIASGGAGKMEHFLEAF-----LAGAD----- 219 (253)
T ss_dssp HHHHTTCSEEEEEETTTTTSCSCCCH-------HHHHHHGGGC--CSCEEEESCCCSHHHHHHHH-----HTTCS-----
T ss_pred HHHHCCCCEEEEEeccCCCCCCCCCH-------HHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----HcCCh-----
Confidence 667889994 44554322 223333 2444444433 57788999999999999998 48885
Q ss_pred cceeec
Q psy10250 368 LFRIGA 373 (387)
Q Consensus 368 ~~RIGt 373 (387)
..-+|+
T Consensus 220 gv~vGs 225 (253)
T 1thf_D 220 AALAAS 225 (253)
T ss_dssp EEEESH
T ss_pred HHHHHH
Confidence 345665
No 182
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=90.31 E-value=7.6 Score=37.61 Aligned_cols=142 Identities=8% Similarity=0.107 Sum_probs=97.0
Q ss_pred CCHHHHHHHHHHHHH-CCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 216 YLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~-~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
.+.+.-..+++.+++ .|.+-+.+ +++. ++.+...+=+++|++++++ -+.+.+....--+.++..+.++...+
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKi--k~g~---~~~~~~~e~v~avr~a~g~--~~~l~vDan~~~~~~~a~~~~~~l~~ 213 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKV--KLGA---RTPAQDLEHIRSIVKAVGD--RASVRVDVNQGWDEQTASIWIPRLEE 213 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEE--ECSS---SCHHHHHHHHHHHHHHHGG--GCEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEE--ecCC---CChHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 456777788999999 99999885 3321 2455566778888888874 25567775433266777777888888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|.+||--.... ... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-+++.++++..++|.
T Consensus 214 ~~i~~iEqP~~~----~~~-------~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGi 276 (370)
T 1nu5_A 214 AGVELVEQPVPR----ANF-------GALRRLTEQN--GVAILADESLSSLSSAFELAR----DHAVDAFSLKLCNMGGI 276 (370)
T ss_dssp HTCCEEECCSCT----TCH-------HHHHHHHHHC--SSEEEESTTCCSHHHHHHHHH----TTCCSEEEECHHHHTSH
T ss_pred cCcceEeCCCCc----ccH-------HHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHH----hCCCCEEEEchhhcCCH
Confidence 999999855321 122 3445555543 467777778899999999995 3347778888888865
Q ss_pred cchHHHHH
Q psy10250 374 SSLLNNIL 381 (387)
Q Consensus 374 Ss~~~il~ 381 (387)
+..+++..
T Consensus 277 t~~~~i~~ 284 (370)
T 1nu5_A 277 ANTLKVAA 284 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45555544
No 183
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=90.30 E-value=3.1 Score=44.78 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=81.8
Q ss_pred CeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCC------CCC-CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhc
Q psy10250 175 HTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGF------PSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN 247 (387)
Q Consensus 175 ~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigF------P~G-~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~ 247 (387)
..-.|+...+++...+...+... ..+..+-.. +.| |+. ..+.+.=+.-++.+.+.||+.|-+.=-.|.+
T Consensus 212 d~irIf~s~n~l~~l~~~i~~ak-~~G~~v~~~-i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~-- 287 (718)
T 3bg3_A 212 DVFRVFDSLNYLPNMLLGMEAAG-SAGGVVEAA-ISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLL-- 287 (718)
T ss_dssp CEEEEECSSCCHHHHHHHHHHHH-TTTSEEEEE-EECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCC--
T ss_pred CEEEEEecHHHHHHHHHHHHHHH-HcCCeEEEE-EEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCc--
Confidence 44456666777776655543210 123443333 232 232 3466777777888999999988766444543
Q ss_pred CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC-CCC--CCCCChhhh
Q psy10250 248 NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST-GKE--KTNATIPAG 316 (387)
Q Consensus 248 g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST-Gf~--~~gat~~~~ 316 (387)
....+++-++.+++..+ .+.|+...=+|...-...+..|+++|||.|-++- |+| .+++.++.+
T Consensus 288 -~P~~v~~lV~~lk~~~p-----~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~v 353 (718)
T 3bg3_A 288 -KPTACTMLVSSLRDRFP-----DLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGAL 353 (718)
T ss_dssp -CHHHHHHHHHHHHHHST-----TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHH
T ss_pred -CHHHHHHHHHHHHHhCC-----CCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHH
Confidence 37788888888887664 2446665554444444456789999999999875 443 456666543
No 184
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.19 E-value=4.7 Score=38.79 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=62.6
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
...++.+++.|++-|.+-.. +... .++.+++ . .++|+... .+.++. +.+.++|+|+|.
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g-------~p~~---~~~~l~~-~----g~~v~~~v---~s~~~a----~~a~~~GaD~i~ 149 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAG-------NPTK---YIRELKE-N----GTKVIPVV---ASDSLA----RMVERAGADAVI 149 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESS-------CCHH---HHHHHHH-T----TCEEEEEE---SSHHHH----HHHHHTTCSCEE
T ss_pred HHHHHHHHHCCCCEEEECCC-------CcHH---HHHHHHH-c----CCcEEEEc---CCHHHH----HHHHHcCCCEEE
Confidence 34456677788888775332 2222 2333433 1 25666644 244443 346789999998
Q ss_pred cCC-CCCCC-CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 302 TST-GKEKT-NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 302 TST-Gf~~~-gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
-.. .++.. |..+ . .+-++.+++.. ++.|=++|||+|.+++.+++. +|++
T Consensus 150 v~g~~~GG~~G~~~-~----~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~-----~GA~ 200 (326)
T 3bo9_A 150 AEGMESGGHIGEVT-T----FVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFA-----LGAE 200 (326)
T ss_dssp EECTTSSEECCSSC-H----HHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred EECCCCCccCCCcc-H----HHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHH-----hCCC
Confidence 643 22221 3111 1 13344444443 577889999999999999994 7985
No 185
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=90.18 E-value=7.8 Score=37.73 Aligned_cols=148 Identities=13% Similarity=0.096 Sum_probs=99.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhc-CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~-g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
..+.+.-..+++.+++.|.+-+.+=+..+.+.+ .+.+...+=+++|++++++ -+.+.+....--+.++..+.++...
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~--d~~l~vDan~~~~~~~a~~~~~~l~ 224 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGP--DIRLMIDAFHWYSRTDALALGRGLE 224 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCT--TSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 356777788899999999999885332111000 0456666778888888865 3566676543225677777788888
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCC-HHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIST-FEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt-~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
+.|.+||--+.- + ... +..+.+++.+ ++.|=+-+.+.| .+++..++. .-+++.++++..++|
T Consensus 225 ~~~i~~iE~P~~--~--~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~----~~~~d~v~ik~~~~G 287 (382)
T 1rvk_A 225 KLGFDWIEEPMD--E--QSL-------SSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIK----AGACDILRTGVNDVG 287 (382)
T ss_dssp TTTCSEEECCSC--T--TCH-------HHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHH----TTCCSEEEECHHHHT
T ss_pred hcCCCEEeCCCC--h--hhH-------HHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHH----cCCCCEEeeCchhcC
Confidence 899999985532 1 122 3455555554 477777788999 999999995 344677788888885
Q ss_pred c-cchHHHHH
Q psy10250 373 A-SSLLNNIL 381 (387)
Q Consensus 373 t-Ss~~~il~ 381 (387)
. +..+++..
T Consensus 288 Git~~~~i~~ 297 (382)
T 1rvk_A 288 GITPALKTMH 297 (382)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5 55555544
No 186
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=90.11 E-value=0.22 Score=46.05 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=64.8
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.+++.|++.|||-+ + +|..+ .++...++..+ +..|+. -. |++|+.+ |.+.|+||||-
T Consensus 89 d~~~~A~~aGAd~v--~-------~p~~d---~~v~~~~~~~g----~~~i~G--~~-t~~e~~~----A~~~Gad~vk~ 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFV--V-------TPGIT---EDILEAGVDSE----IPLLPG--IS-TPSEIMM----GYALGYRRFKL 145 (225)
T ss_dssp HHHHHHHHHTCSSE--E-------CSSCC---HHHHHHHHHCS----SCEECE--EC-SHHHHHH----HHTTTCCEEEE
T ss_pred HHHHHHHHCCCCEE--E-------eCCCC---HHHHHHHHHhC----CCEEEe--eC-CHHHHHH----HHHCCCCEEEE
Confidence 78999999999876 2 23322 24444444333 344554 23 6677643 56899999998
Q ss_pred CCCCCCCCC-ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccc
Q psy10250 303 STGKEKTNA-TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 375 (387)
Q Consensus 303 STGf~~~ga-t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs 375 (387)
|..... .+ +-++.++...+ .+.+=+.||| +.+.+..|+. ..|+ .-+|.|.
T Consensus 146 ---FPa~~~~G~-------~~lk~i~~~~~-~ipvvaiGGI-~~~N~~~~l~----~~Ga-------~~v~gSa 196 (225)
T 1mxs_A 146 ---FPAEISGGV-------AAIKAFGGPFG-DIRFCPTGGV-NPANVRNYMA----LPNV-------MCVGTTW 196 (225)
T ss_dssp ---TTHHHHTHH-------HHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHHH----STTB-------CCEEECT
T ss_pred ---ccCccccCH-------HHHHHHHhhCC-CCeEEEECCC-CHHHHHHHHh----ccCC-------EEEEEch
Confidence 521000 11 34555554443 6889999999 5678888883 1476 5666443
No 187
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=89.91 E-value=1.1 Score=42.57 Aligned_cols=86 Identities=3% Similarity=-0.032 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHcCCC-eeeeecchhHHh-----cCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHH
Q psy10250 7 YLLETRLHEIELLAKQKVD-EVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYAS 80 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~-EiD~Vin~~~lk-----~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~ 80 (387)
...+.=..-++.+.+.|+| -|++=++....+ .++.+.+.+-++++++.++-.+.+|+ ++.+ +.+++.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi---~~~~-~~~~~~~~a 178 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKL---PPYF-DLVHFDIMA 178 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEE---CCCC-SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEE---CCCC-CHHHHHHHH
Confidence 3445555566777788988 777643211221 23667777778888776543355664 3445 677888889
Q ss_pred HHHHHcCCCEEecCCC
Q psy10250 81 MTAMFAGSDFIKTSTG 96 (387)
Q Consensus 81 ~~a~~ag~dfvKTSTG 96 (387)
+.+.++|+|+|..+..
T Consensus 179 ~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 179 EILNQFPLTYVNSVNS 194 (311)
T ss_dssp HHHTTSCCCEEEECCC
T ss_pred HHHHHcCCcEEEecCC
Confidence 9999999999988654
No 188
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=89.85 E-value=8.6 Score=37.85 Aligned_cols=153 Identities=12% Similarity=0.078 Sum_probs=103.0
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-EeeccC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~L 279 (387)
.+++... +||..-..+.+.-..+++.+++.|.+-+.+=+.. +.+.-.+-+++|++++++ -+.+. +....-
T Consensus 127 ~v~~y~t-~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~------~~~~d~~~v~avR~a~g~--~~~l~~vDan~~ 197 (391)
T 3gd6_A 127 KIKVCYP-IFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK------NLDADEEFLSRVKEEFGS--RVRIKSYDFSHL 197 (391)
T ss_dssp EEEBCEE-ECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS------CHHHHHHHHHHHHHHHGG--GCEEEEEECTTC
T ss_pred eEEeeEE-ecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC------CHHHHHHHHHHHHHHcCC--CCcEEEecCCCC
Confidence 4666555 3532224456777888999999999998864422 455556667888888865 35666 776433
Q ss_pred CChHHHHHHHHHHHHcCC--CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGS--DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGa--DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
-+.++-.+.++...+.|. +||--...- ..+ +..+.+++.++ +.| -+.+.+.+++..++.
T Consensus 198 ~~~~~A~~~~~~l~~~~i~~~~iEqP~~~----~d~-------~~~~~l~~~~~--iPI--dE~~~~~~~~~~~~~---- 258 (391)
T 3gd6_A 198 LNWKDAHRAIKRLTKYDLGLEMIESPAPR----NDF-------DGLYQLRLKTD--YPI--SEHVWSFKQQQEMIK---- 258 (391)
T ss_dssp SCHHHHHHHHHHHTTCCSSCCEEECCSCT----TCH-------HHHHHHHHHCS--SCE--EEECCCHHHHHHHHH----
T ss_pred cCHHHHHHHHHHHHhcCCCcceecCCCCh----hhH-------HHHHHHHHHcC--CCc--CCCCCCHHHHHHHHH----
Confidence 367777778888888999 999855421 122 35556666543 555 668999999999995
Q ss_pred hcCCCccCCCcceeec-cchHHHHH
Q psy10250 358 MLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 358 ~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.-+++.++++..|+|. +..+++..
T Consensus 259 ~~~~d~v~~k~~~~GGit~~~~ia~ 283 (391)
T 3gd6_A 259 KDAIDIFNISPVFIGGLTSAKKAAY 283 (391)
T ss_dssp HTCCSEEEECHHHHTSHHHHHHHHH
T ss_pred cCCCCEEEECchhcCCHHHHHHHHH
Confidence 3457888888888864 55555544
No 189
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.84 E-value=6.9 Score=38.65 Aligned_cols=198 Identities=13% Similarity=0.088 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc---CCCCCCHHHH
Q psy10250 72 TSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT---LSGDDTEAVV 148 (387)
Q Consensus 72 ~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~---L~~~~T~~~i 148 (387)
+.+++.+.++...++|+|+|-. || +.++ +. ..++++++.+.+..+. |.+ ...+++
T Consensus 32 ~~~~Kl~ia~~L~~~Gv~~IE~--g~--p~~~-~~----------------d~e~v~~i~~~~~~~~i~~l~r-~~~~di 89 (370)
T 3rmj_A 32 TKEEKIRVARQLEKLGVDIIEA--GF--AAAS-PG----------------DFEAVNAIAKTITKSTVCSLSR-AIERDI 89 (370)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE--EE--GGGC-HH----------------HHHHHHHHHTTCSSSEEEEEEE-SSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE--eC--CCCC-HH----------------HHHHHHHHHHhCCCCeEEEEec-CCHHHH
Confidence 4577777888889999999995 33 1111 11 1123334444443332 221 367888
Q ss_pred HHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC----CccHH------------H---HHHHhhhcCCCCCceEEEEec
Q psy10250 149 ETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY----PARVV------------D---VIKVLDRENARDDVKVASVAA 209 (387)
Q Consensus 149 ~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~----P~~v~------------~---a~~~L~~~~~~~~v~v~tVvi 209 (387)
+..++... ..+...|+++ +.|.. . +.+..+. .+..| . .
T Consensus 90 ~~a~~al~----------------~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~----~g~~v--~-~ 146 (370)
T 3rmj_A 90 RQAGEAVA----------------PAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIARE----YTDDV--E-F 146 (370)
T ss_dssp HHHHHHHT----------------TSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTT----TCSCE--E-E
T ss_pred HHHHHHHh----------------hCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHH----cCCEE--E-E
Confidence 77765433 2333444332 33321 2 2233332 23332 3 3
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 210 GFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 210 gFP~G-~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
+.|.+ ..+.+.-+.-++.+.+.||++|-+.=-.|. .....+++-++.+++..++ .=++.|+...=+|...-..-
T Consensus 147 ~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~--~~~~~l~~H~Hnd~GlAvAN 221 (370)
T 3rmj_A 147 SCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGY---SIPYKTEEFFRELIAKTPN--GGKVVWSAHCHNDLGLAVAN 221 (370)
T ss_dssp EEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSC---CCHHHHHHHHHHHHHHSTT--GGGSEEEEECBCTTSCHHHH
T ss_pred ecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCC--cCceEEEEEeCCCCChHHHH
Confidence 77754 455666666678888899999866644554 3477888888888887754 12466777666554444445
Q ss_pred HHHHHHcCCCEEEcCC-CCCC--CCCChhhhHhH
Q psy10250 289 SMTAMFAGSDFIKTST-GKEK--TNATIPAGIIM 319 (387)
Q Consensus 289 ~~ia~~aGaDfVKTST-Gf~~--~gat~~~~~~m 319 (387)
+..|.++||+.|-+|- |+|. +++.+|.+..+
T Consensus 222 ~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv~~ 255 (370)
T 3rmj_A 222 SLAALKGGARQVECTVNGLGERAGNASVEEIVMA 255 (370)
T ss_dssp HHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHH
T ss_pred HHHHHHhCCCEEEEeccccCcccccccHHHHHHH
Confidence 7789999999999876 4553 56777754433
No 190
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=89.80 E-value=3.4 Score=40.45 Aligned_cols=26 Identities=35% Similarity=0.539 Sum_probs=21.3
Q ss_pred EeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 338 PAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 338 asGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
+.|||.|.+++..++ .+|++ ..-||+
T Consensus 247 AeGGI~Tpeda~~~l-----~~GaD-----gV~VGs 272 (330)
T 2yzr_A 247 AAGGVATPADAALMM-----QLGSD-----GVFVGS 272 (330)
T ss_dssp ECSCCCSHHHHHHHH-----HTTCS-----CEEESH
T ss_pred EECCCCCHHHHHHHH-----HcCcC-----EEeeHH
Confidence 799999999999999 47985 455555
No 191
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=89.68 E-value=7.6 Score=37.98 Aligned_cols=155 Identities=7% Similarity=0.047 Sum_probs=102.3
Q ss_pred CceEEEEecCCCCCCCCH---HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec
Q psy10250 201 DVKVASVAAGFPSGQYLL---ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG 277 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~---e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~ 277 (387)
.+++-+. +|++. .+. +.-..+++.+++.|.+-+.+= .+. ++.+...+=+++|++++++ -+.+.+...
T Consensus 123 ~vp~~~~-~g~~~--~~~~~~e~~~~~a~~~~~~Gf~~vKik--~g~---~~~~~d~e~v~avR~a~G~--d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYAS-FQSYS--DSPQWISRSVSNVEAQLKKGFEQIKVK--IGG---TSFKEDVRHINALQHTAGS--SITMILDAN 192 (382)
T ss_dssp EEEEEEE-CCCBC--SSTTHHHHHHHHHHHHHTTTCCEEEEE--CSS---SCHHHHHHHHHHHHHHHCT--TSEEEEECT
T ss_pred ceeEEEE-ecccC--CCcccHHHHHHHHHHHHHcCCCEEEEc--CCC---CCHHHHHHHHHHHHHhhCC--CCEEEEECC
Confidence 4566555 45544 234 666788999999999988863 321 3566677778888988875 256666654
Q ss_pred cCCChHHHHHHHHHHHHc-CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 278 ELKTSENIYCASMTAMFA-GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 278 ~L~t~e~i~~a~~ia~~a-GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
.--+.++-.+.++...+. |.+||--+.. + ... +..+.+++.+ ++.|=+-+.+.+.+++..++.
T Consensus 193 ~~~~~~~a~~~~~~l~~~~~i~~iEqP~~--~--~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~--- 256 (382)
T 2gdq_A 193 QSYDAAAAFKWERYFSEWTNIGWLEEPLP--F--DQP-------QDYAMLRSRL--SVPVAGGENMKGPAQYVPLLS--- 256 (382)
T ss_dssp TCCCHHHHHTTHHHHTTCSCEEEEECCSC--S--SCH-------HHHHHHHTTC--SSCEEECTTCCSHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHhhccCCeEEECCCC--c--ccH-------HHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH---
Confidence 322566666677777788 9999986542 1 122 2344444332 466766778999999999995
Q ss_pred HhcCCCccCCCcceeec-cchHHHHHH
Q psy10250 357 IMLGPDWLNKDLFRIGA-SSLLNNILQ 382 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIGt-Ss~~~il~~ 382 (387)
.-+++.++++..|+|. +..+++..-
T Consensus 257 -~~~~d~v~ik~~~~GGit~~~~i~~~ 282 (382)
T 2gdq_A 257 -QRCLDIIQPDVMHVNGIDEFRDCLQL 282 (382)
T ss_dssp -TTCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred -cCCCCEEecCccccCCHHHHHHHHHH
Confidence 3347888999999965 555555443
No 192
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=89.56 E-value=7.3 Score=37.67 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=97.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|..+.+.-..+++.+++.|.+-+.+= ++. ++.+...+=+++|++++++. +++.+....--+.++-.+.++...
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKik--~g~---~~~~~d~~~v~avr~a~g~~--~~l~vDan~~~~~~~a~~~~~~l~ 209 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKIK--VGK---DDIATDIARIQEIRKRVGSA--VKLRLDANQGWRPKEAVTAIRKME 209 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEEE--CCS---SCHHHHHHHHHHHHHHHCSS--SEEEEECTTCSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEE--eCC---CCHHHHHHHHHHHHHHhCCC--CeEEEECCCCCCHHHHHHHHHHHh
Confidence 33466777788999999999999963 321 35666677788888888652 456776543225677777777788
Q ss_pred H--cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCccee
Q psy10250 294 F--AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRI 371 (387)
Q Consensus 294 ~--aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RI 371 (387)
+ .|.+||--... + ... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++++..++
T Consensus 210 ~~~~~i~~iEqP~~--~--~d~-------~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~ 272 (366)
T 1tkk_A 210 DAGLGIELVEQPVH--K--DDL-------AGLKKVTDAT--DTPIMADESVFTPRQAFEVLQ----TRSADLINIKLMKA 272 (366)
T ss_dssp HTTCCEEEEECCSC--T--TCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----HTCCSEEEECHHHH
T ss_pred hcCCCceEEECCCC--c--ccH-------HHHHHHHhhC--CCCEEEcCCCCCHHHHHHHHH----hCCCCEEEeehhhh
Confidence 8 89999975532 1 122 3445555543 466766677899999999995 34577788888888
Q ss_pred ec-cchHHHHH
Q psy10250 372 GA-SSLLNNIL 381 (387)
Q Consensus 372 Gt-Ss~~~il~ 381 (387)
|. +..+++..
T Consensus 273 GGit~~~~i~~ 283 (366)
T 1tkk_A 273 GGISGAEKINA 283 (366)
T ss_dssp TSHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 55 45555544
No 193
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=89.56 E-value=7.5 Score=35.29 Aligned_cols=135 Identities=10% Similarity=0.073 Sum_probs=83.7
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeecc--
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE-- 278 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~-- 278 (387)
.+.+++ .++.++..+.+..+ +.+.+.|.+-|++..+.. ++ .+++++..+.. -|++. +-++.
T Consensus 10 ~~~~~~-~~~~f~~~~~~~~l---~~~~~~G~~~vEl~~~~~------~~--~~~~~~~l~~~----gl~~~~~~~~~~~ 73 (269)
T 3ngf_A 10 PRFAAN-LSTMFNEVPFLERF---RLAAEAGFGGVEFLFPYD------FD--ADVIARELKQH----NLTQVLFNMPPGD 73 (269)
T ss_dssp CEEEEE-TTTSCTTSCHHHHH---HHHHHTTCSEEECSCCTT------SC--HHHHHHHHHHT----TCEEEEEECCCSC
T ss_pred cceeee-chhhhccCCHHHHH---HHHHHcCCCEEEecCCcc------CC--HHHHHHHHHHc----CCcEEEEecCCCc
Confidence 467777 58999988887655 455578999999986431 11 34444444332 25555 23322
Q ss_pred CC--------C-------hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCh-hhhHhHHHHHHHHHHH---cCCCceEeE-
Q psy10250 279 LK--------T-------SENIYCASMTAMFAGSDFIKTSTGKEKTNATI-PAGIIMCSAIKHFHKL---SGKKIGLKP- 338 (387)
Q Consensus 279 L~--------t-------~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~-~~~~~m~~~v~~~~~~---~~~~~gIKa- 338 (387)
+. + .+.+.++.++|.+.|+++|...+| .+.+.+. +....+.+.++.+.+. .|-++.+-.
T Consensus 74 ~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 152 (269)
T 3ngf_A 74 WAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPL 152 (269)
T ss_dssp TTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCC
T ss_pred cccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeC
Confidence 10 1 145677889999999999999888 4444433 2334445555555443 334555554
Q ss_pred ------eccCCCHHHHHHHHH
Q psy10250 339 ------AGGISTFEDSVRWIY 353 (387)
Q Consensus 339 ------sGGIrt~~~a~~~i~ 353 (387)
..-+.|.+++..++.
T Consensus 153 n~~~~~~~~~~~~~~~~~l~~ 173 (269)
T 3ngf_A 153 NTRNMPGYFIVHQLEAVGLVK 173 (269)
T ss_dssp CTTTSTTBSCCCHHHHHHHHH
T ss_pred CcccCccchhcCHHHHHHHHH
Confidence 123689999999996
No 194
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=89.55 E-value=4.5 Score=36.74 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=69.1
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 281 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t 281 (387)
.++..|+ -. .+.+.=+.-++.+++-|++-|.+-.+ +- .-.+-++++++..++ +-+---| .+ +
T Consensus 16 ~~~i~v~-r~----~~~~~~~~~~~al~~gGv~~iel~~k-----~~---~~~~~i~~l~~~~~~---~~vgagt-vi-~ 77 (214)
T 1wbh_A 16 GPVVPVI-VV----KKLEHAVPMAKALVAGGVRVLNVTLR-----TE---CAVDAIRAIAKEVPE---AIVGAGT-VL-N 77 (214)
T ss_dssp CSEEEEE-CC----SSGGGHHHHHHHHHHTTCCEEEEESC-----ST---THHHHHHHHHHHCTT---SEEEEES-CC-S
T ss_pred CCEEEEE-EC----CCHHHHHHHHHHHHHcCCCEEEEeCC-----Ch---hHHHHHHHHHHHCcC---CEEeeCE-EE-E
Confidence 4566774 33 22233345678888999997777643 21 223455666666553 2233334 45 4
Q ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 282 SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
.++ .++|+++|||||-++ ++ +++ +....+..+.. +-+ |+.|.+++..-. .+|+
T Consensus 78 ~d~----~~~A~~aGAd~v~~p-~~-----d~~--------v~~~~~~~g~~--~i~--G~~t~~e~~~A~-----~~Ga 130 (214)
T 1wbh_A 78 PQQ----LAEVTEAGAQFAISP-GL-----TEP--------LLKAATEGTIP--LIP--GISTVSELMLGM-----DYGL 130 (214)
T ss_dssp HHH----HHHHHHHTCSCEEES-SC-----CHH--------HHHHHHHSSSC--EEE--EESSHHHHHHHH-----HTTC
T ss_pred HHH----HHHHHHcCCCEEEcC-CC-----CHH--------HHHHHHHhCCC--EEE--ecCCHHHHHHHH-----HCCC
Confidence 443 477899999999744 43 332 22333333322 222 599999998888 5899
Q ss_pred Ccc
Q psy10250 362 DWL 364 (387)
Q Consensus 362 ~w~ 364 (387)
+++
T Consensus 131 d~v 133 (214)
T 1wbh_A 131 KEF 133 (214)
T ss_dssp CEE
T ss_pred CEE
Confidence 755
No 195
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=89.53 E-value=1.2 Score=42.21 Aligned_cols=121 Identities=18% Similarity=0.161 Sum_probs=66.3
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..+++.+.+.|||-||..... +...+ ++.+++. . ..+-++.++. +.++..+ +.++|+|||.
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~------~~~~~---~~~~~~~-~--~~i~l~~~v~---~~~~~~~----a~~~Gad~I~ 150 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVL------TPADE---EHHIDKW-K--FKVPFVCGAR---NLGEALR----RIAEGAAMIR 150 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTS------CCSCS---SCCCCGG-G--CSSCEEEEES---SHHHHHH----HHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEeeeCCC------ChHHH---HHHHHHh-C--CCceEEeecC---CHHHHHH----HHHcCCCEEE
Confidence 577888899999999654321 01000 1111110 0 1233444432 4555433 5789999997
Q ss_pred cCCCCCCCC---------------------CChhh-------hHhHHHHHHHHHHHcCCCceEe--EeccCCCHHHHHHH
Q psy10250 302 TSTGKEKTN---------------------ATIPA-------GIIMCSAIKHFHKLSGKKIGLK--PAGGISTFEDSVRW 351 (387)
Q Consensus 302 TSTGf~~~g---------------------at~~~-------~~~m~~~v~~~~~~~~~~~gIK--asGGIrt~~~a~~~ 351 (387)
+ +|+...| .|+.. .....+.++.+++..+ +.+= ++|||+|.+++..+
T Consensus 151 v-~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~--~pvi~~a~GGI~~~e~i~~~ 227 (297)
T 2zbt_A 151 T-KGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGR--LPVVNFAAGGIATPADAALM 227 (297)
T ss_dssp E-CCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSS--CSSCEEBCSSCCSHHHHHHH
T ss_pred E-cccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcC--CCcEEEeeCCCCCHHHHHHH
Confidence 6 4432111 11110 1112345666666543 3344 89999999999999
Q ss_pred HHHHHHhcCCCccCCCcceeecc
Q psy10250 352 IYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 352 i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
+ .+|++ ..-+|++
T Consensus 228 ~-----~aGad-----gvvvGsa 240 (297)
T 2zbt_A 228 M-----HLGMD-----GVFVGSG 240 (297)
T ss_dssp H-----HTTCS-----EEEECGG
T ss_pred H-----HcCCC-----EEEEchH
Confidence 9 58985 3455653
No 196
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.46 E-value=11 Score=37.08 Aligned_cols=156 Identities=12% Similarity=0.060 Sum_probs=102.0
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeec-CchhhhcCCh-hHHHHHHHHHHHHhCCCcceEEEEeec
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVI-QRSLVLNNQW-PELFSEVKQMKEKCGEKIHMKTILAVG 277 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vi-n~~~lk~g~~-~~v~~Ei~~v~~~~~~~~~lKvIlEt~ 277 (387)
..+++-+. +++ ..+.+.-..+++.+.+.|.+-|.+=. ++| ++. +...+=+++|++++++ -+.+.+...
T Consensus 132 ~~vp~~~~-~~~---~~~~~~~~~~a~~~~~~Gf~~iKik~spvG----~~~~~~~~e~v~avr~a~G~--d~~l~vDan 201 (401)
T 2hzg_A 132 HGKRPYAS-LLF---GDTPQETLERARAARRDGFAAVKFGWGPIG----RGTVAADADQIMAAREGLGP--DGDLMVDVG 201 (401)
T ss_dssp CCBEEEEE-EEC---CSSHHHHHHHHHHHHHTTCSEEEEESTTTT----SSCHHHHHHHHHHHHHHHCS--SSEEEEECT
T ss_pred CceEeeEE-cCC---CCCHHHHHHHHHHHHHhCCCeEEEcCCCCC----CCHHHHHHHHHHHHHHHhCC--CCeEEEECC
Confidence 35676554 243 23667778889999999999998731 022 255 6666778888888865 256666654
Q ss_pred cCC--ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHH
Q psy10250 278 ELK--TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLV 355 (387)
Q Consensus 278 ~L~--t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~ 355 (387)
.-- +.++-.+.++...+.|.+||--+..- ... +..+.+++. .-++.|=+-+.+.|.+++..++.
T Consensus 202 ~~~~~~~~~a~~~~~~l~~~~i~~iEqP~~~----~d~-------~~~~~l~~~-~~~iPI~~dE~~~~~~~~~~~i~-- 267 (401)
T 2hzg_A 202 QIFGEDVEAAAARLPTLDAAGVLWLEEPFDA----GAL-------AAHAALAGR-GARVRIAGGEAAHNFHMAQHLMD-- 267 (401)
T ss_dssp TTTTTCHHHHHTTHHHHHHTTCSEEECCSCT----TCH-------HHHHHHHTT-CCSSEEEECTTCSSHHHHHHHHH--
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEECCCCc----cCH-------HHHHHHHhh-CCCCCEEecCCcCCHHHHHHHHH--
Confidence 332 45666666777888999999865421 122 234444430 12566766778899999999995
Q ss_pred HHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 356 LIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 356 ~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.-+++.++.+..++|. +..+++..
T Consensus 268 --~~~~d~v~ik~~~~GGit~~~~i~~ 292 (401)
T 2hzg_A 268 --YGRIGFIQIDCGRIGGLGPAKRVAD 292 (401)
T ss_dssp --HSCCSEEEECHHHHTSHHHHHHHHH
T ss_pred --CCCCCEEEeCcchhCCHHHHHHHHH
Confidence 4457888888888865 55555544
No 197
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.39 E-value=5.6 Score=38.48 Aligned_cols=148 Identities=13% Similarity=0.116 Sum_probs=82.8
Q ss_pred cCCCCCCCC-HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGFPSGQYL-LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igFP~G~~~-~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.+.|.+... .+.-+.-++.+.+.||++|-+.=-.|. .....+++-++.+++..++ .. ++.|+...=+|...-..
T Consensus 140 f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~-~~-~~~i~~H~Hnd~GlA~A 214 (325)
T 3eeg_A 140 FFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSN-ID-KAILSAHCHNDLGLATA 214 (325)
T ss_dssp EEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSC-GG-GSEEEECBCCTTSCHHH
T ss_pred EEccccccchHHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCC-CC-ceEEEEEeCCCCCHHHH
Confidence 377855444 555555677778889998765533454 4567888888888887764 11 35677766555444444
Q ss_pred HHHHHHHcCCCEEEcCC-CCC--CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccC--CCHHHHHHHHHHHHHhcCCC
Q psy10250 288 ASMTAMFAGSDFIKTST-GKE--KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGI--STFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 288 a~~ia~~aGaDfVKTST-Gf~--~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGI--rt~~~a~~~i~l~~~~~Ga~ 362 (387)
-+..|+++|++.|-+|- |+| .+++.+|.+..+++.. .+..|+.. || ..+.++..|+ .+.+|..
T Consensus 215 N~laA~~aGa~~vd~tv~GlGer~GN~~lE~vv~~L~~~-------~~~~g~~t--gidl~~L~~~s~~v---~~~~g~~ 282 (325)
T 3eeg_A 215 NSLAALQNGARQVECTINGIGERAGNTALEEVVMAMECH-------KETLGLET--GINHKKLVPISHLV---STLMRMQ 282 (325)
T ss_dssp HHHHHHHHTCCEEEEBGGGCCSTTCCCBHHHHHHHHHHT-------HHHHCEEC--CCCGGGHHHHHHHH---HHHTTC-
T ss_pred HHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHhh-------hhccCCCC--CcCHHHHHHHHHHH---HHHhCCC
Confidence 56789999999999876 454 3567776544433211 11133442 34 3455555555 4567753
Q ss_pred ccCCCcceeecc
Q psy10250 363 WLNKDLFRIGAS 374 (387)
Q Consensus 363 w~~~~~~RIGtS 374 (387)
+.+..-.+|.+
T Consensus 283 -~~~~~p~vG~~ 293 (325)
T 3eeg_A 283 -VQSNKAIVGRN 293 (325)
T ss_dssp ------------
T ss_pred -CCCCCCccchh
Confidence 44444555554
No 198
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=89.32 E-value=3 Score=40.50 Aligned_cols=142 Identities=13% Similarity=0.122 Sum_probs=94.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHH-HHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIY-CASMT 291 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~-~a~~i 291 (387)
|..+.+.-..+++.+.+.|.+-+.+ +.+ ++.+...+=+++|++++++. +.+.+... -+ +.++.. +.++.
T Consensus 138 ~~~~~~~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~g~~--~~l~vDan~~~-~~~~a~~~~~~~ 208 (369)
T 2p8b_A 138 SIADPENMAEEAASMIQKGYQSFKM--KVG----TNVKEDVKRIEAVRERVGND--IAIRVDVNQGW-KNSANTLTALRS 208 (369)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEE--ECC----SCHHHHHHHHHHHHHHHCTT--SEEEEECTTTT-BSHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHHHcCcCEEEE--EeC----CCHHHHHHHHHHHHHHhCCC--CeEEEECCCCC-CHHHHHHHHHHH
Confidence 3346677778899999999999995 333 25566667788888888753 44456653 34 456665 66777
Q ss_pred HHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCccee
Q psy10250 292 AMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRI 371 (387)
Q Consensus 292 a~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RI 371 (387)
..+.|.+||--... +++. +..+.+++.+ ++.|=+-+.+.+.+++..++. .-+++.++.+..++
T Consensus 209 l~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~ 271 (369)
T 2p8b_A 209 LGHLNIDWIEQPVI-------ADDI----DAMAHIRSKT--DLPLMIDEGLKSSREMRQIIK----LEAADKVNIKLMKC 271 (369)
T ss_dssp STTSCCSCEECCBC-------TTCH----HHHHHHHHTC--CSCEEESTTCCSHHHHHHHHH----HTCCSEEEECHHHH
T ss_pred HHhCCCcEEECCCC-------cccH----HHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHH----hCCCCEEEeecchh
Confidence 77889999975432 1111 2445555443 466777778899999999995 34567777788888
Q ss_pred ec-cchHHHHH
Q psy10250 372 GA-SSLLNNIL 381 (387)
Q Consensus 372 Gt-Ss~~~il~ 381 (387)
|. +..+++..
T Consensus 272 GGit~~~~i~~ 282 (369)
T 2p8b_A 272 GGIYPAVKLAH 282 (369)
T ss_dssp TSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 55 44444443
No 199
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=89.14 E-value=9.5 Score=37.11 Aligned_cols=153 Identities=10% Similarity=0.014 Sum_probs=102.8
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChh-HHHHHHHHHHHHhCCCcceEEEEeec
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWP-ELFSEVKQMKEKCGEKIHMKTILAVG 277 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~-~v~~Ei~~v~~~~~~~~~lKvIlEt~ 277 (387)
..+++... +| ..+.+.-+.+++.+++. |.+-+-+=+.. +.. .-.+-+++|+++.++ -+.+.+...
T Consensus 127 ~~v~~~~~-~~----~~~~~~~~~~a~~~~~~~G~~~~K~K~g~------~~~~~d~~~v~avR~a~g~--~~~l~vDan 193 (367)
T 3dg3_A 127 DRMRVSHM-LG----FDDPVKMVAEAERIRETYGINTFKVKVGR------RPVQLDTAVVRALRERFGD--AIELYVDGN 193 (367)
T ss_dssp SEEEEEEE-EE----SSCHHHHHHHHHHHHHHHCCCEEEEECCC------SSTHHHHHHHHHHHHHHGG--GSEEEEECT
T ss_pred CeEEEEEE-ec----CCCHHHHHHHHHHHHHhcCccEEEEeeCC------ChhhhHHHHHHHHHHHhCC--CCEEEEECC
Confidence 35565555 34 45778888899999999 99988764422 222 345567888888865 245666654
Q ss_pred cCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 278 ELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 278 ~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
.--+.++-.+.++...+.|.+||--+.. +++. +..+.+++.+ .+.|=+-+.+.+.+++..++.
T Consensus 194 ~~~~~~~a~~~~~~l~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~---- 256 (367)
T 3dg3_A 194 RGWSAAESLRAMREMADLDLLFAEELCP-------ADDV----LSRRRLVGQL--DMPFIADESVPTPADVTREVL---- 256 (367)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSCEESCSC-------TTSH----HHHHHHHHHC--SSCEEECTTCSSHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEECCCC-------cccH----HHHHHHHHhC--CCCEEecCCcCCHHHHHHHHH----
Confidence 3336677667777778889999985542 1111 2445555543 466777778999999999995
Q ss_pred hcCCCccCCCcceeeccchHHHHHH
Q psy10250 358 MLGPDWLNKDLFRIGASSLLNNILQ 382 (387)
Q Consensus 358 ~~Ga~w~~~~~~RIGtSs~~~il~~ 382 (387)
.-.++.++++..|+|-+..+++..-
T Consensus 257 ~~~~d~v~~k~~~~Git~~~~ia~~ 281 (367)
T 3dg3_A 257 GGSATAISIKTARTGFTGSTRVHHL 281 (367)
T ss_dssp HTSCSEEEECHHHHTTHHHHHHHHH
T ss_pred cCCCCEEEeehhhhhHHHHHHHHHH
Confidence 2347778888888887877777654
No 200
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=89.10 E-value=2.5 Score=38.18 Aligned_cols=115 Identities=15% Similarity=0.195 Sum_probs=62.4
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE--
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI-- 300 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV-- 300 (387)
..++.+.+.|||-|=+-... .- + +...+.++.+++ . + +++++-.. -.|+.+..+ +...++|||
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~--~~-~--~~~~~~~~~~~~-~-g---~~ig~~~~-p~t~~e~~~----~~~~~~d~vl~ 146 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQ--SS-T--IHLHRTINQIKS-L-G---AKAGVVLN-PGTPLTAIE----YVLDAVDLVLI 146 (230)
T ss_dssp HHHHHHHHTTCSEEEEECST--TT-C--SCHHHHHHHHHH-T-T---SEEEEEEC-TTCCGGGGT----TTTTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEecC--cc-c--hhHHHHHHHHHH-c-C---CcEEEEeC-CCCCHHHHH----HHHhhCCEEEE
Confidence 57888888999876333220 01 1 223334444443 1 2 34555442 112332222 224689999
Q ss_pred -EcCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 301 -KTSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 301 -KTSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
....||+.. +... ...+.++.+++.. +..+.|=+.|||+ .+++..++ .+|++
T Consensus 147 ~~~~pg~~g~--~~~~--~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~-----~aGad 202 (230)
T 1rpx_A 147 MSVNPGFGGQ--SFIE--SQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVI-----EAGAN 202 (230)
T ss_dssp ESSCTTCSSC--CCCT--THHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHH-----HHTCC
T ss_pred EEEcCCCCCc--cccH--HHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHH-----HcCCC
Confidence 777777533 2211 1223445555443 2357788999999 78888887 47984
No 201
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=89.09 E-value=1.9 Score=42.14 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHcCCCeeeeecc----------hhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCC--CHHHHH
Q psy10250 10 ETRLHEIELLAKQKVDEVDIVIQ----------RSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELK--TSENIY 77 (387)
Q Consensus 10 ~~K~~E~~~a~~~GA~EiD~Vin----------~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~--~~e~i~ 77 (387)
+.=..-++.+.+.|+|.||+-+. +|.-...+.+.+.+-+++++++++ .+|-+-+-.+... +.++..
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~--~PV~vKiR~g~~~~~~~~~~~ 147 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPVTVKMRLGLEGKETYRGLA 147 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS--SCEEEEEESCBTTCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC--CceEEEEecCcCccccHHHHH
Confidence 33344466777889999998752 244445577888888899988774 3444433445431 234567
Q ss_pred HHHHHHHHcCCCEEecCCC
Q psy10250 78 YASMTAMFAGSDFIKTSTG 96 (387)
Q Consensus 78 ~a~~~a~~ag~dfvKTSTG 96 (387)
..++.+.++|+|+|..+.+
T Consensus 148 ~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHcCCCEEEEecC
Confidence 7788889999999987654
No 202
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=89.08 E-value=7.1 Score=41.50 Aligned_cols=224 Identities=10% Similarity=0.089 Sum_probs=128.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHc--ccCccEEEEEeccCCCCHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC--EEKIHMKTILAVGELKTSENIYYASMT 82 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~--~~~~~~KvIlEt~~L~~~e~i~~a~~~ 82 (387)
-..+++.|+.=++...+.|.++|++-.+...- +|++ .++++.+.. ..+..+-++. .. ..+.|.++.+.
T Consensus 88 ~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~asp--~D~e----~v~~i~~~~l~~~~~~i~aL~--r~--~~~did~a~ea 157 (644)
T 3hq1_A 88 DPMSPARKRRMFDLLVRMGYKEIEVGFPSASQ--TDFD----FVREIIEQGAIPDDVTIQVLT--QC--RPELIERTFQA 157 (644)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEEECTTTCH--HHHH----HHHHHHHTTCSCTTCEEEEEE--ES--CHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCh--hHHH----HHHHHHhcCCCCCCeEEEEEe--cC--CHhhHHHHHHH
Confidence 35689999999999999999999998754311 1222 234444331 1123333333 21 34567878877
Q ss_pred HHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHH
Q psy10250 83 AMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEE 162 (387)
Q Consensus 83 a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~ 162 (387)
+..+|.+.|-+...- + ..+... .| ..|.+++.+.+.+++
T Consensus 158 l~~a~~~~Vhif~st-------S--------d~h~~~------------------~l--~~s~eevle~~~~~v------ 196 (644)
T 3hq1_A 158 CSGAPRAIVHFYNST-------S--------ILQRRV------------------VF--RANRAEVQAIATDGA------ 196 (644)
T ss_dssp HTTCSEEEEEEEEEC-------C--------HHHHHH------------------TT--CCCHHHHHHHHHHHH------
T ss_pred HhcCCCCEEEEEecC-------C--------HHHHHH------------------Hh--CCCHHHHHHHHHHHH------
Confidence 777887765542210 0 111111 01 347777777776665
Q ss_pred HHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCC-----CCHHHHHHHHHHHHHC---CCC
Q psy10250 163 LKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQ-----YLLETRLHEIELLAKQ---KVD 234 (387)
Q Consensus 163 ~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~-----~~~e~K~~Ea~~Ai~~---GAd 234 (387)
+++++.-++. .+ +. ++||++. ...+.=+.-++.+++. ||+
T Consensus 197 ------------------------~~a~~~~~~~---~~----~~-~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad 244 (644)
T 3hq1_A 197 ------------------------RKCVEQAAKY---PG----TQ-WRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPE 244 (644)
T ss_dssp ------------------------HHHHHHHHHS---CS----SE-EEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSS
T ss_pred ------------------------HHHHHHhhhc---cC----ce-EEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 2222222211 11 22 2555543 4555555555566654 576
Q ss_pred ---eeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC-CCC--C
Q psy10250 235 ---EVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST-GKE--K 308 (387)
Q Consensus 235 ---EID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST-Gf~--~ 308 (387)
.|.+.=-+|.. ....+.+-|+.+++..+. .-+++|+...=++...-...+..|+++||+.|-++- |.| .
T Consensus 245 ~~~~I~LpDTvG~~---tP~~~~~li~~l~~~v~~--~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti~G~GERa 319 (644)
T 3hq1_A 245 RPIIFNLPATVEMT---TPNVYADSIEWMSRNLAN--RESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNGERT 319 (644)
T ss_dssp SCEEEEEEESSCCS---CHHHHHHHHHHHHHHSTT--GGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTT
T ss_pred ceeEEEecCCCccc---CHHHHHHHHHHHHHhccc--ccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecCCCCCccc
Confidence 56544334432 356667777888776653 246888887765555455567889999999998643 665 3
Q ss_pred CCCChhhh
Q psy10250 309 TNATIPAG 316 (387)
Q Consensus 309 ~gat~~~~ 316 (387)
+++.++.+
T Consensus 320 GNa~LE~l 327 (644)
T 3hq1_A 320 GNVCLVTL 327 (644)
T ss_dssp CBCBHHHH
T ss_pred cCccHHHH
Confidence 66777643
No 203
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.92 E-value=16 Score=34.98 Aligned_cols=145 Identities=15% Similarity=0.137 Sum_probs=94.7
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+++ .+.||.=++-.
T Consensus 26 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~ 102 (314)
T 3qze_A 26 GSMVALV-TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGAN 102 (314)
T ss_dssp EEEEECC-CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCS
T ss_pred eeEEeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCc
Confidence 3444444 556 5677788888888999999999997444445554444556555666667777765 48899999998
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKK 333 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~ 333 (387)
++ ++..+.++.|.++|+|.+=-.+=|.. ..|.+....-+ +.+..+.+ .++=
T Consensus 103 st-~eai~la~~A~~~Gadavlv~~P~y~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 179 (314)
T 3qze_A 103 ST-REAVALTEAAKSGGADACLLVTPYYN-KPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK-VPNI 179 (314)
T ss_dssp SH-HHHHHHHHHHHHTTCSEEEEECCCSS-CCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT-STTE
T ss_pred CH-HHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc-CCCE
Confidence 66 45567789999999998766554422 12332222211 22333332 5667
Q ss_pred ceEeEeccCCCHHHHHHHHH
Q psy10250 334 IGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 334 ~gIKasGGIrt~~~a~~~i~ 353 (387)
+|||-|.| +..+..+++.
T Consensus 180 vgiKdssg--d~~~~~~~~~ 197 (314)
T 3qze_A 180 IGIKEATG--DLQRAKEVIE 197 (314)
T ss_dssp EEEEECSC--CHHHHHHHHH
T ss_pred EEEEcCCC--CHHHHHHHHH
Confidence 89999876 6666666664
No 204
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=88.65 E-value=6.6 Score=38.58 Aligned_cols=150 Identities=9% Similarity=0.044 Sum_probs=100.5
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-EL 279 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L 279 (387)
.+++... +|. .+.+.-..+++.+++.|.+-+.+ +.+ ++.+...+=+++|++++++. +.+.+... -+
T Consensus 134 ~vp~~~~-~g~----~~~e~~~~~a~~~~~~Gf~~vKi--k~g----~~~~~~~e~v~avR~a~g~d--~~l~vDan~~~ 200 (397)
T 2qde_A 134 RIPLGLV-LGA----GEPEAVAEEALAVLREGFHFVKL--KAG----GPLKADIAMVAEVRRAVGDD--VDLFIDINGAW 200 (397)
T ss_dssp SEEBCEE-CCC----SCHHHHHHHHHHHHHHTCSCEEE--ECC----SCHHHHHHHHHHHHHHHCTT--SCEEEECTTCC
T ss_pred CcceEEE-CCC----CCHHHHHHHHHHHHHhhhhheee--ccc----CCHHHHHHHHHHHHHhhCCC--CEEEEECCCCC
Confidence 5555544 343 45677788899999999998886 332 35566667788888888753 34456643 34
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
+.++-.+.++...+.|.+||--+... ... +..+.+++.+ ++.|=+-+.+.+.+++..++. .-
T Consensus 201 -~~~~a~~~~~~l~~~~i~~iEqP~~~----~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~ 262 (397)
T 2qde_A 201 -TYDQALTTIRALEKYNLSKIEQPLPA----WDL-------DGMARLRGKV--ATPIYADESAQELHDLLAIIN----KG 262 (397)
T ss_dssp -CHHHHHHHHHHHGGGCCSCEECCSCT----TCH-------HHHHHHHTTC--SSCEEESTTCCSHHHHHHHHH----HT
T ss_pred -CHHHHHHHHHHHHhCCCCEEECCCCh----hhH-------HHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHH----cC
Confidence 66777777888888999999865421 112 2344444332 566777778899999999995 34
Q ss_pred CCCccCCCcceeec-cchHHHHH
Q psy10250 360 GPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 360 Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.++.++++..|+|. +..+++..
T Consensus 263 ~~d~v~ik~~~~GGit~~~~i~~ 285 (397)
T 2qde_A 263 AADGLMIKTQKAGGLLKAQRWLT 285 (397)
T ss_dssp CCSEEEECHHHHTSHHHHHHHHH
T ss_pred CCCEEEEeccccCCHHHHHHHHH
Confidence 57888888888855 55555544
No 205
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.44 E-value=10 Score=36.10 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-CCccHH----HHHHHhhhcCCCCCceEEEEecCCCCCCC
Q psy10250 142 DDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-YPARVV----DVIKVLDRENARDDVKVASVAAGFPSGQY 216 (387)
Q Consensus 142 ~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-~P~~v~----~a~~~L~~~~~~~~v~v~tVvigFP~G~~ 216 (387)
..+.++..++++.-. +.||..+=+ +|.+.+ .++...+. ..++++++.+ | .
T Consensus 23 ~~~~~~K~~i~~~L~----------------~~Gv~~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l~---~---~ 77 (293)
T 3ewb_X 23 NFDVKEKIQIALQLE----------------KLGIDVIEAGFPISSPGDFECVKAIAKA---IKHCSVTGLA---R---C 77 (293)
T ss_dssp CCCHHHHHHHHHHHH----------------HHTCSEEEEECGGGCHHHHHHHHHHHHH---CCSSEEEEEE---E---S
T ss_pred CCCHHHHHHHHHHHH----------------HcCCCEEEEeCCCCCccHHHHHHHHHHh---cCCCEEEEEe---c---C
Confidence 456666666666554 346666644 354433 22222221 2467887763 2 1
Q ss_pred CHHHHHHHHHHHHH----CCCCeeeeecCchhhh-----cCChhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHHH
Q psy10250 217 LLETRLHEIELLAK----QKVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIY 286 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~----~GAdEID~Vin~~~lk-----~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i~ 286 (387)
. ...++.+++ .|+++|.+++..+-+. ....++..+.+..+++.+.. +..+-+-+|...-.+++.+.
T Consensus 78 ~----~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~ 153 (293)
T 3ewb_X 78 V----EGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLI 153 (293)
T ss_dssp S----HHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHH
T ss_pred C----HHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHH
Confidence 1 112344444 5999999998766443 45678888888888887754 34555556654444678788
Q ss_pred HHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC----CceEeEe--ccCCCHHHHHHHHHHHHHh
Q psy10250 287 CASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK----KIGLKPA--GGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 287 ~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~----~~gIKas--GGIrt~~~a~~~i~l~~~~ 358 (387)
+.++.+.++|+|.| +-++|. ++|..+..+++.+ ++..++ .+++..= -|-- ...++.-+ +
T Consensus 154 ~~~~~~~~~G~~~i~l~DT~G~----~~P~~v~~lv~~l---~~~~~~~~~~~l~~H~Hnd~Gla-~AN~laA~-----~ 220 (293)
T 3ewb_X 154 EAVQTAIDAGATVINIPDTVGY----TNPTEFGQLFQDL---RREIKQFDDIIFASHCHDDLGMA-TANALAAI-----E 220 (293)
T ss_dssp HHHHHHHHTTCCEEEEECSSSC----CCHHHHHHHHHHH---HHHCTTGGGSEEEEECBCTTSCH-HHHHHHHH-----H
T ss_pred HHHHHHHHcCCCEEEecCCCCC----CCHHHHHHHHHHH---HHhcCCccCceEEEEeCCCcChH-HHHHHHHH-----H
Confidence 99999999999955 445664 6788777665444 555553 2333321 0111 12233333 5
Q ss_pred cCCCccCCCcceeec
Q psy10250 359 LGPDWLNKDLFRIGA 373 (387)
Q Consensus 359 ~Ga~w~~~~~~RIGt 373 (387)
+|+++++....=+|-
T Consensus 221 aGa~~vd~sv~GlGe 235 (293)
T 3ewb_X 221 NGARRVEGTINGIGE 235 (293)
T ss_dssp TTCCEEEEBGGGCCT
T ss_pred hCCCEEEeecccccc
Confidence 899776665555554
No 206
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=88.42 E-value=3.6 Score=39.92 Aligned_cols=213 Identities=15% Similarity=0.088 Sum_probs=114.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCCCC--CCHH
Q psy10250 69 ELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLSGD--DTEA 146 (387)
Q Consensus 69 ~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~~~--~T~~ 146 (387)
.+ +.+++...++...++|+|+|--..+ ..++++ ++..+|+. |..++ . .+++ .+-.-++.|-|. ..++
T Consensus 20 ~~-~~~~k~~ia~~L~~aGv~~IEvg~~-~~p~~~--f~~~~~~~--~~e~l---~-~i~~-~~~~~~~~L~r~~~~~~~ 88 (320)
T 3dxi_A 20 DF-NSKIVDAYILAMNELPIDYLEVGYR-NKPSKE--YMGKFGYT--PVSVL---K-HLRN-ISTKKIAIMLNEKNTTPE 88 (320)
T ss_dssp CC-CHHHHHHHHHHHHTTTCCEEEEEEC-CSCCSS--CCCHHHHC--CHHHH---H-HHHH-HCCSEEEEEEEGGGCCGG
T ss_pred cC-CHHHHHHHHHHHHHhCCCEEEEecc-cCCccc--cccccccC--hHHHH---H-HHhh-ccCCeEEEEecCCCCChh
Confidence 35 4577777888889999999996654 344443 22233332 22222 1 1222 233333334222 2234
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHH
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIE 226 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~ 226 (387)
+++.+..... .....-.|+..+..++.+.+..+... ..+..|... +.+=.+..+.+.-+..+.
T Consensus 89 dv~~~~~a~~---------------~Gvd~~ri~~~~~nle~~~~~v~~ak-~~G~~v~~~-~~~~~~~~~~~~~l~~~~ 151 (320)
T 3dxi_A 89 DLNHLLLPII---------------GLVDMIRIAIDPQNIDRAIVLAKAIK-TMGFEVGFN-VMYMSKWAEMNGFLSKLK 151 (320)
T ss_dssp GHHHHHGGGT---------------TTCSEEEEEECGGGHHHHHHHHHHHH-TTTCEEEEE-ECCTTTGGGSTTSGGGGG
T ss_pred hHHHHHHhhh---------------cCCCEEEEEecHHHHHHHHHHHHHHH-HCCCEEEEE-EEeCCCCCCHHHHHHHHH
Confidence 6665432211 13455566667766676666532100 135665544 244233322222333333
Q ss_pred HHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC-C
Q psy10250 227 LLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST-G 305 (387)
Q Consensus 227 ~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST-G 305 (387)
+ ++.||++|-+.=-.|.+ ....+.+-++.+++..+ +.|+...=+|.-.-..-+..|+++|+|.|-+|- |
T Consensus 152 ~-~~~G~~~i~l~Dt~G~~---~P~~~~~lv~~l~~~~~------~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~G 221 (320)
T 3dxi_A 152 A-IDKIADLFCMVDSFGGI---TPKEVKNLLKEVRKYTH------VPVGFHGHDNLQLGLINSITAIDDGIDFIDATITG 221 (320)
T ss_dssp G-GTTTCSEEEEECTTSCC---CHHHHHHHHHHHHHHCC------SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGG
T ss_pred H-hhCCCCEEEECcccCCC---CHHHHHHHHHHHHHhCC------CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccc
Confidence 3 57799998777555653 57778888888887653 235554443333333345678999999999876 4
Q ss_pred CC--CCCCChhhhHhH
Q psy10250 306 KE--KTNATIPAGIIM 319 (387)
Q Consensus 306 f~--~~gat~~~~~~m 319 (387)
+| .+++.+|.+..+
T Consensus 222 lG~~~GN~~~E~lv~~ 237 (320)
T 3dxi_A 222 MGRGAGNLKMELLLTY 237 (320)
T ss_dssp CSSTTCBCBHHHHHHH
T ss_pred cCCcccchhHHHHHHH
Confidence 44 355666654443
No 207
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=88.31 E-value=21 Score=35.52 Aligned_cols=154 Identities=8% Similarity=0.047 Sum_probs=98.9
Q ss_pred CceEEEEecCCCCCCCCH-HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGFPSGQYLL-ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~-e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
.+++-+. |+-.+ .+. +.-..+++.+++.|.+-+.+ ..+. +.+...+=+++|++++++. +++.+....-
T Consensus 171 ~vp~~~s--g~~~~-~~~~e~~~~~a~~~~~~Gf~~vKi--k~g~----~~~~d~e~v~avR~avG~d--~~l~vDan~~ 239 (428)
T 3bjs_A 171 RIPAYAG--GIALG-YQPKESLAEEAQEYIARGYKALKL--RIGD----AARVDIERVRHVRKVLGDE--VDILTDANTA 239 (428)
T ss_dssp CEEEEEE--SSCSC-SCCHHHHHHHHHHHHHHTCSEEEE--ECCS----CHHHHHHHHHHHHHHHCTT--SEEEEECTTC
T ss_pred ceeeeee--ccccC-CChHHHHHHHHHHHHHCCCCEEEE--CCCC----CHHHHHHHHHHHHHhcCCC--CEEEEECCCC
Confidence 4555433 44332 334 66677899999999998886 2221 4566667788888888753 4556665432
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
-+.++..+.++...+.|.+||--+.. +++ .+..+.+++.++ ++.|=+-+.+.|.+++..++. .-
T Consensus 240 ~~~~eai~~~~~L~~~~i~~iEqP~~-------~~d----~~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~----~~ 303 (428)
T 3bjs_A 240 YTMADARRVLPVLAEIQAGWLEEPFA-------CND----FASYREVAKITP-LVPIAAGENHYTRFEFGQMLD----AG 303 (428)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEECCSC-------TTC----HHHHHHHTTTCS-SSCEEECTTCCSHHHHHHHHT----TC
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCC-------ccC----HHHHHHHHHhCC-CCcEEcCCCcCCHHHHHHHHH----hC
Confidence 26677777778888899999985532 111 123344433322 266666677899999999994 23
Q ss_pred CCCccCCCcceeec-cchHHHHH
Q psy10250 360 GPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 360 Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.++.++.+..++|. +.++++..
T Consensus 304 ~~d~v~ik~~~~GGitea~~ia~ 326 (428)
T 3bjs_A 304 AVQVWQPDLSKCGGITEGIRIAA 326 (428)
T ss_dssp CEEEECCBTTTSSCHHHHHHHHH
T ss_pred CCCEEEeCccccCCHHHHHHHHH
Confidence 46788999999965 55555544
No 208
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=88.18 E-value=21 Score=35.04 Aligned_cols=154 Identities=10% Similarity=0.054 Sum_probs=104.9
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
..+++.+. +|+ .+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++|+++.++ -+.+.+....
T Consensus 155 ~~v~~y~s-~g~----~~~e~~~~~a~~~~~~~G~~~~KlKvG~-----~~~~~d~~~v~avR~a~G~--~~~l~vDaN~ 222 (383)
T 3toy_A 155 RPIPAYDS-YGV----LDARDDERTLRTACDEHGFRAIKSKGGH-----GDLATDEAMIKGLRALLGP--DIALMLDFNQ 222 (383)
T ss_dssp CCEEEEEE-CSS----CCHHHHHHHHHHHHHTSCCCEEEEECCS-----SCHHHHHHHHHHHHHHHCT--TSEEEEECTT
T ss_pred CceEEeEe-cCC----CCHHHHHHHHHHHHHccCCcEEEEecCC-----CCHHHHHHHHHHHHHHhCC--CCeEEEeCCC
Confidence 45666555 355 6788888999999999 99987764321 2445556667888888875 3566777643
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
--+.++-.+.++...+.|.+||--+.-- ..+ +..+.+++.+ .+.|=+-..+.+..++..++. .
T Consensus 223 ~~~~~~A~~~~~~l~~~~i~~iEeP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~ 285 (383)
T 3toy_A 223 SLDPAEATRRIARLADYDLTWIEEPVPQ----ENL-------SGHAAVRERS--EIPIQAGENWWFPRGFAEAIA----A 285 (383)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSCT----TCH-------HHHHHHHHHC--SSCEEECTTCCHHHHHHHHHH----H
T ss_pred CCCHHHHHHHHHHHHhhCCCEEECCCCc----chH-------HHHHHHHhhc--CCCEEeCCCcCCHHHHHHHHH----c
Confidence 3366777777888888999999855421 122 3445555543 466666667899999999995 3
Q ss_pred cCCCccCCCcceee-ccchHHHHHH
Q psy10250 359 LGPDWLNKDLFRIG-ASSLLNNILQ 382 (387)
Q Consensus 359 ~Ga~w~~~~~~RIG-tSs~~~il~~ 382 (387)
-.++.++++..|+| -+..+++..-
T Consensus 286 ~a~d~v~ik~~~~GGit~~~~ia~~ 310 (383)
T 3toy_A 286 GASDFIMPDLMKVGGITGWLNVAGQ 310 (383)
T ss_dssp TCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred CCCCEEEeCccccCCHHHHHHHHHH
Confidence 44788899999996 4566665543
No 209
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=88.16 E-value=0.9 Score=43.06 Aligned_cols=112 Identities=13% Similarity=0.122 Sum_probs=57.3
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..+++.+.+.|+|-+ ++++... +|+..+++.++. .-++.|.=..--++++.+...+ +...|.+|+-
T Consensus 109 ~~f~~~~~~aG~dGv-iv~Dl~~----------ee~~~~~~~~~~-~gl~~i~liap~s~~eri~~ia--~~~~gfiy~v 174 (271)
T 1ujp_A 109 ERFFGLFKQAGATGV-ILPDLPP----------DEDPGLVRLAQE-IGLETVFLLAPTSTDARIATVV--RHATGFVYAV 174 (271)
T ss_dssp HHHHHHHHHHTCCEE-ECTTCCG----------GGCHHHHHHHHH-HTCEEECEECTTCCHHHHHHHH--TTCCSCEEEE
T ss_pred HHHHHHHHHcCCCEE-EecCCCH----------HHHHHHHHHHHH-cCCceEEEeCCCCCHHHHHHHH--HhCCCCEEEE
Confidence 567888888899754 2334431 455555555543 1234443222212344333222 2235888888
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHH
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
|.+|..+.....+ .-..+.++.+++.+ .+.|=+-|||+|.+++.++
T Consensus 175 s~~G~TG~~~~~~--~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~ 220 (271)
T 1ujp_A 175 SVTGVTGMRERLP--EEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA 220 (271)
T ss_dssp CC--------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH
T ss_pred ecCcccCCCCCCC--ccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh
Confidence 8887643221111 11113455555543 5677789999999999996
No 210
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=88.16 E-value=10 Score=34.59 Aligned_cols=120 Identities=13% Similarity=0.181 Sum_probs=73.8
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec------cCC-----------C-----
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELK-----------T----- 281 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~-----------t----- 281 (387)
-.+.+.+.|.+-|++....... ++ ..+++++++.+.. .-+++..=+. +.+ +
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~----~~--~~~~~~~~~~l~~-~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~ 98 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHT----RT--REHAQAFRAKCDA-AGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRA 98 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGG----CS--HHHHHHHHHHHHH-TTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHH
T ss_pred HHHHHHHcCCCEEEecCCCCCc----CC--HHHHHHHHHHHHH-cCCEEEEEeeccCCcccccccccccccCCCCHHHHH
Confidence 4566778999999999754321 11 3445555555533 1244433221 110 1
Q ss_pred --hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHH
Q psy10250 282 --SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 282 --~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
.+.+.++.++|.+.|+++|.+.+|+.+.+ +.+....+.+.++.+.+.. |-++.+-.- ..|.+++..+++
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~--~~~~~~~~~l~~ 172 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPES-SSPDYSELVRVTQDLLTHAANHGQAVHLETG--QESADHLLEFIE 172 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-TSHHHHHHHHHHHHHHHHHHTTTCEEEEECC--SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-chHHHHHHHHHHHHHHHHHHHcCCEEEEecC--CCCHHHHHHHHH
Confidence 14566788999999999999999987654 4445555555565555443 334445443 478999999986
No 211
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.15 E-value=1.8 Score=38.95 Aligned_cols=74 Identities=15% Similarity=0.038 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCC---CC--ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKT---NA--TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLV 355 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~---ga--t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~ 355 (387)
+.+++.+| . .|+|||+.+.=|... +. +.. .+.++.+.+....++.|=+.|||. .+++.+++
T Consensus 97 t~~e~~~A----~-~GaDyv~~g~vf~t~sk~~~~~~~g-----~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~--- 162 (210)
T 3ceu_A 97 SVEEVKNR----K-HFYDYVFMSPIYDSISKVNYYSTYT-----AEELREAQKAKIIDSKVMALGGIN-EDNLLEIK--- 162 (210)
T ss_dssp SHHHHHTT----G-GGSSEEEECCCC---------CCCC-----HHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHH---
T ss_pred CHHHHHHH----h-hCCCEEEECCcCCCCCCCCCCCCCC-----HHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHH---
Confidence 45555433 4 799999966544211 11 111 023444433321468899999998 78888888
Q ss_pred HHhcCCCccCCCcceeeccchH
Q psy10250 356 LIMLGPDWLNKDLFRIGASSLL 377 (387)
Q Consensus 356 ~~~~Ga~w~~~~~~RIGtSs~~ 377 (387)
.+|+ .-++.+|++
T Consensus 163 --~~Ga-------~gVav~s~i 175 (210)
T 3ceu_A 163 --DFGF-------GGAVVLGDL 175 (210)
T ss_dssp --HTTC-------SEEEESHHH
T ss_pred --HhCC-------CEEEEhHHh
Confidence 4888 577777765
No 212
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=88.15 E-value=17 Score=36.18 Aligned_cols=160 Identities=10% Similarity=-0.046 Sum_probs=105.4
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcC-ChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g-~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
..+++-+. +|.. .+.+.-..+++.+++.|.+-+.+=+..+....+ +.+...+=+++|++++++ -+.+.+....
T Consensus 166 ~~v~~y~s--~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~--d~~L~vDaN~ 239 (412)
T 3stp_A 166 DRIPVYYS--KLYA--GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGY--DNDLMLECYM 239 (412)
T ss_dssp SSEEEEEE--CCCS--CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS--SSEEEEECTT
T ss_pred ceEEEEEE--ecCC--CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCC--CCeEEEECCC
Confidence 35665554 3443 367888889999999999998876544321101 224445556777888875 3566777643
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
--+.++-.+.++...+.|.+||--+.- +++. +..+.+++. ..+.|=+-+.+.+..++..++. .
T Consensus 240 ~~~~~~Ai~~~~~Le~~~i~~iEeP~~-------~~d~----~~~~~l~~~--~~iPIa~dE~~~~~~~~~~li~----~ 302 (412)
T 3stp_A 240 GWNLDYAKRMLPKLAPYEPRWLEEPVI-------ADDV----AGYAELNAM--NIVPISGGEHEFSVIGCAELIN----R 302 (412)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSC-------TTCH----HHHHHHHHT--CSSCEEECTTCCSHHHHHHHHH----T
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCC-------cccH----HHHHHHHhC--CCCCEEeCCCCCCHHHHHHHHH----c
Confidence 336777777888888899999986542 1111 344555544 3466666677999999999995 2
Q ss_pred cCCCccCCCcceee-ccchHHHHHH
Q psy10250 359 LGPDWLNKDLFRIG-ASSLLNNILQ 382 (387)
Q Consensus 359 ~Ga~w~~~~~~RIG-tSs~~~il~~ 382 (387)
-.++.++++..|+| -+.++++..-
T Consensus 303 ~a~D~v~ik~~~~GGit~a~kia~~ 327 (412)
T 3stp_A 303 KAVSVLQYDTNRVGGITAAQKINAI 327 (412)
T ss_dssp TCCSEECCCHHHHTHHHHHHHHHHH
T ss_pred CCCCEEecChhhcCCHHHHHHHHHH
Confidence 34788899999996 4556655543
No 213
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=87.85 E-value=7.8 Score=35.48 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=62.9
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
=+.-++.+++-|++-|.+-.+ +- ...+-|+++++..++ +-+-.-| .| +.++ .++|+++|||||
T Consensus 31 ~~~~~~al~~gGv~~iel~~k-----~~---~~~~~i~~l~~~~~~---l~vgaGt-vl-~~d~----~~~A~~aGAd~v 93 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITFR-----SE---AAADAIRLLRANRPD---FLIAAGT-VL-TAEQ----VVLAKSSGADFV 93 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEETT-----ST---THHHHHHHHHHHCTT---CEEEEES-CC-SHHH----HHHHHHHTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEecc-----Cc---hHHHHHHHHHHhCcC---cEEeeCc-Ee-eHHH----HHHHHHCCCCEE
Confidence 345678888999997777643 22 224456667666653 3333344 44 4443 477899999999
Q ss_pred EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 301 KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 301 KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
-++ ++ +++ -++.-++ .+..+ -+ |+.|.+++.... .+|++++
T Consensus 94 ~~p-~~-----d~~-------v~~~ar~-~g~~~--i~--Gv~t~~e~~~A~-----~~Gad~v 134 (224)
T 1vhc_A 94 VTP-GL-----NPK-------IVKLCQD-LNFPI--TP--GVNNPMAIEIAL-----EMGISAV 134 (224)
T ss_dssp ECS-SC-----CHH-------HHHHHHH-TTCCE--EC--EECSHHHHHHHH-----HTTCCEE
T ss_pred EEC-CC-----CHH-------HHHHHHH-hCCCE--Ee--ccCCHHHHHHHH-----HCCCCEE
Confidence 644 32 332 1233333 33332 22 599999998888 5899755
No 214
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=87.76 E-value=4.4 Score=35.67 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCC
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGa 297 (387)
.+.=...++.+.+.|++-|.+-.... ...+-++.+++..+...+ +-.+...+.++. +.+.++|+
T Consensus 21 ~~~~~~~~~~~~~~G~~~iev~~~~~--------~~~~~i~~ir~~~~~~~~----ig~~~v~~~~~~----~~a~~~Ga 84 (205)
T 1wa3_A 21 VEEAKEKALAVFEGGVHLIEITFTVP--------DADTVIKELSFLKEKGAI----IGAGTVTSVEQC----RKAVESGA 84 (205)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETTST--------THHHHHHHTHHHHHTTCE----EEEESCCSHHHH----HHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCh--------hHHHHHHHHHHHCCCCcE----EEecccCCHHHH----HHHHHcCC
Confidence 34334456677778999887654421 223457777776653222 223222255543 55677999
Q ss_pred CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 298 DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 298 DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
||| .+.||. .+ -++..++ .|++.-.|+.|.+++...+ .+|++++
T Consensus 85 d~i-v~~~~~-----~~-------~~~~~~~-----~g~~vi~g~~t~~e~~~a~-----~~Gad~v 128 (205)
T 1wa3_A 85 EFI-VSPHLD-----EE-------ISQFCKE-----KGVFYMPGVMTPTELVKAM-----KLGHTIL 128 (205)
T ss_dssp SEE-ECSSCC-----HH-------HHHHHHH-----HTCEEECEECSHHHHHHHH-----HTTCCEE
T ss_pred CEE-EcCCCC-----HH-------HHHHHHH-----cCCcEECCcCCHHHHHHHH-----HcCCCEE
Confidence 999 777763 21 2222222 3455556899999988877 5898654
No 215
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.63 E-value=17 Score=36.05 Aligned_cols=158 Identities=11% Similarity=0.036 Sum_probs=101.2
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCch-hhhc--CChhHHHHHHHHHHHHhCCCcceEEEEee
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRS-LVLN--NQWPELFSEVKQMKEKCGEKIHMKTILAV 276 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~-~lk~--g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt 276 (387)
..+++-+. + |..+.+.-+.+++.+++.|.+-+-++-.-. .+.. .+.+.-.+=+++|++++++ -+.+.+..
T Consensus 113 ~~v~~y~~-~----~~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~--d~~L~vDa 185 (405)
T 3rr1_A 113 DKMRTYSW-V----GGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGN--TVEFGLDF 185 (405)
T ss_dssp SCEEEEEE-C----CCSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGG--GSEEEEEC
T ss_pred CceeeeEe-C----CCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCC--CceEEEEC
Confidence 35777666 3 356778888999999999999999832110 0000 0123334456667777764 35566665
Q ss_pred ccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 277 GELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 277 ~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
.-=-+.++-.+.++...+.|.+||--+..- -.+ +..+.+++. -.+.|=+-+.+.+..++..++.
T Consensus 186 N~~~~~~~A~~~~~~L~~~~i~~iEeP~~~----~d~-------~~~~~l~~~--~~iPIa~dE~i~~~~~~~~~l~--- 249 (405)
T 3rr1_A 186 HGRVSAPMAKVLIKELEPYRPLFIEEPVLA----EQA-------ETYARLAAH--THLPIAAGERMFSRFDFKRVLE--- 249 (405)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSCEECSSCC----SST-------HHHHHHHTT--CSSCEEECTTCCSHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCCc----ccH-------HHHHHHHhc--CCCCEEecCCcCCHHHHHHHHH---
Confidence 432267777778888888999999865521 122 234444433 2455666667899999999995
Q ss_pred HhcCCCccCCCcceee-ccchHHHHH
Q psy10250 357 IMLGPDWLNKDLFRIG-ASSLLNNIL 381 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIG-tSs~~~il~ 381 (387)
.-+++.++++..|+| -+.++++..
T Consensus 250 -~~a~d~v~~d~~~~GGitea~kia~ 274 (405)
T 3rr1_A 250 -AGGVSILQPDLSHAGGITECVKIAA 274 (405)
T ss_dssp -HCCCSEECCBTTTTTHHHHHHHHHH
T ss_pred -HhCCCeEEEChhhcCCHHHHHHHHH
Confidence 345788899999986 455555554
No 216
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.53 E-value=7.2 Score=35.75 Aligned_cols=104 Identities=19% Similarity=0.144 Sum_probs=62.2
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
=+.-++.+++-|++-|.+-.+ + ..-.+-++++++..++ +-+---| .+ +.++ .++|+++|||||
T Consensus 40 ~~~~~~al~~gGv~~iel~~k-----~---~~~~~~i~~l~~~~~~---~~igagt-vl-~~d~----~~~A~~aGAd~v 102 (225)
T 1mxs_A 40 ILPLADALAAGGIRTLEVTLR-----S---QHGLKAIQVLREQRPE---LCVGAGT-VL-DRSM----FAAVEAAGAQFV 102 (225)
T ss_dssp HHHHHHHHHHTTCCEEEEESS-----S---THHHHHHHHHHHHCTT---SEEEEEC-CC-SHHH----HHHHHHHTCSSE
T ss_pred HHHHHHHHHHCCCCEEEEecC-----C---ccHHHHHHHHHHhCcc---cEEeeCe-Ee-eHHH----HHHHHHCCCCEE
Confidence 345678888999997777643 2 1223446666666643 2333334 34 4443 477899999999
Q ss_pred EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 301 KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 301 KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
-++ ++ ++ .+....+..+. ..--|+.|.+++..-+ .+|++++
T Consensus 103 ~~p-~~-----d~--------~v~~~~~~~g~----~~i~G~~t~~e~~~A~-----~~Gad~v 143 (225)
T 1mxs_A 103 VTP-GI-----TE--------DILEAGVDSEI----PLLPGISTPSEIMMGY-----ALGYRRF 143 (225)
T ss_dssp ECS-SC-----CH--------HHHHHHHHCSS----CEECEECSHHHHHHHH-----TTTCCEE
T ss_pred EeC-CC-----CH--------HHHHHHHHhCC----CEEEeeCCHHHHHHHH-----HCCCCEE
Confidence 633 32 33 23333333332 2222599999998888 6899654
No 217
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=87.50 E-value=9.4 Score=36.96 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=98.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
.|..+.+.-..+++.+++.|.+-+.+=+. ++.+.-.+=+++|+++.++ -+.+.+....=-+.++-.+.++..
T Consensus 135 ~~~~~~~~~~~~a~~~~~~G~~~~K~K~g------~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~a~~~~~~L 206 (354)
T 3jva_A 135 LGIDEPNVMAQKAVEKVKLGFDTLKIKVG------TGIEADIARVKAIREAVGF--DIKLRLDANQAWTPKDAVKAIQAL 206 (354)
T ss_dssp ECSCCHHHHHHHHHHHHHTTCSEEEEECC------SCHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHHHHHHHHHHT
T ss_pred eCCCCHHHHHHHHHHHHHhCCCeEEEEeC------CCHHHHHHHHHHHHHHcCC--CCeEEEECCCCCCHHHHHHHHHHH
Confidence 35567888889999999999999886442 2334455667788888865 356777654322667666777777
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
.+.|.+||--+.. +++. +..+.+++.+ .+.|=+-+.+.+.+++..++. .-+++.++++..|+|
T Consensus 207 ~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~----~~~~d~v~~k~~~~G 269 (354)
T 3jva_A 207 ADYQIELVEQPVK-------RRDL----EGLKYVTSQV--NTTIMADESCFDAQDALELVK----KGTVDVINIKLMKCG 269 (354)
T ss_dssp TTSCEEEEECCSC-------TTCH----HHHHHHHHHC--SSEEEESTTCCSHHHHHHHHH----HTCCSEEEECHHHHT
T ss_pred HhcCCCEEECCCC-------hhhH----HHHHHHHHhC--CCCEEEcCCcCCHHHHHHHHH----cCCCCEEEECchhcC
Confidence 7889999985442 1111 3445555543 466777778999999999995 345788888888885
Q ss_pred c-cchHHHHH
Q psy10250 373 A-SSLLNNIL 381 (387)
Q Consensus 373 t-Ss~~~il~ 381 (387)
. +..+++..
T Consensus 270 Git~~~~i~~ 279 (354)
T 3jva_A 270 GIHEALKINQ 279 (354)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4 55555544
No 218
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=87.27 E-value=11 Score=36.85 Aligned_cols=148 Identities=9% Similarity=-0.001 Sum_probs=96.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhh-------h-----cCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCCh
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLV-------L-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 282 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-------k-----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~ 282 (387)
..+.+.-..+++.+.+.|.+-+.+=+.-+.+ . ..+.+...+=+++|++++++ -+.+.+....--+.
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~--d~~l~vD~n~~~~~ 212 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGP--EIELMVDLSGGLTT 212 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCH
Confidence 4567777788999999999988853221111 0 01224445567777887865 35666776432266
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 283 ENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
++-.+.++...+.|.+||--+.. +++ .+..+.+++.+ ++.|=+-+.+.|.+++..++. .-.++
T Consensus 213 ~~a~~~~~~l~~~~i~~iE~P~~-------~~~----~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~----~~~~d 275 (392)
T 2poz_A 213 DETIRFCRKIGELDICFVEEPCD-------PFD----NGALKVISEQI--PLPIAVGERVYTRFGFRKIFE----LQACG 275 (392)
T ss_dssp HHHHHHHHHHGGGCEEEEECCSC-------TTC----HHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHT----TTCCS
T ss_pred HHHHHHHHHHHhcCCCEEECCCC-------ccc----HHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH----cCCCC
Confidence 77767777788889999986532 111 13445555554 466777778899999999994 33478
Q ss_pred ccCCCcceeec-cchHHHHH
Q psy10250 363 WLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 363 w~~~~~~RIGt-Ss~~~il~ 381 (387)
.++++..++|. +.++++..
T Consensus 276 ~v~ik~~~~GGit~~~~i~~ 295 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICA 295 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHH
T ss_pred EEecCccccCCHHHHHHHHH
Confidence 88999999976 45555544
No 219
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=87.03 E-value=12 Score=36.75 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeec--Cchhhhc---C------ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVI--QRSLVLN---N------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENI 285 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vi--n~~~lk~---g------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i 285 (387)
+.+.-..+++.+++.|.+-+.+-+ ..|...+ | +.+...+=+++|++++++ -+.+.+...---+.++-
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~--d~~l~vDan~~~~~~~a 226 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGP--EVEVAIDMHGRFDIPSS 226 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCS--SSEEEEECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHHHH
Confidence 456667789999999999998766 2232211 1 223445567777888865 35667776433266777
Q ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 286 YCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
.+.++...+.|.+||--+.- +++. +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++
T Consensus 227 ~~~~~~l~~~~i~~iEeP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~ 289 (410)
T 2qq6_A 227 IRFARAMEPFGLLWLEEPTP-------PENL----DALAEVRRST--STPICAGENVYTRFDFRELFA----KRAVDYVM 289 (410)
T ss_dssp HHHHHHHGGGCCSEEECCSC-------TTCH----HHHHHHHTTC--SSCEEECTTCCSHHHHHHHHH----TTCCSEEC
T ss_pred HHHHHHHhhcCCCeEECCCC-------hhhH----HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH----cCCCCEEe
Confidence 67778788899999986532 1211 2344444332 466666667899999999995 33478888
Q ss_pred CCcceeec-cchHHHHH
Q psy10250 366 KDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 366 ~~~~RIGt-Ss~~~il~ 381 (387)
++..++|. +.++++..
T Consensus 290 ik~~~~GGite~~~ia~ 306 (410)
T 2qq6_A 290 PDVAKCGGLAEAKRIAN 306 (410)
T ss_dssp CBHHHHTHHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHH
Confidence 88888865 55555544
No 220
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=87.00 E-value=18 Score=36.89 Aligned_cols=150 Identities=15% Similarity=0.123 Sum_probs=86.8
Q ss_pred CCceEEEEecCCC--CCC--CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEE
Q psy10250 200 DDVKVASVAAGFP--SGQ--YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTIL 274 (387)
Q Consensus 200 ~~v~v~tVvigFP--~G~--~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIl 274 (387)
.++++++.+ -=| .|. .+-++...-++.|++.|++.|-+....+.+ +. +...++.+.. +..+-+-+
T Consensus 78 ~~~~l~~l~-R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~-----~n----i~~~i~~ak~~G~~v~~~i 147 (464)
T 2nx9_A 78 PNTPLQMLL-RGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV-----RN----MQQALQAVKKMGAHAQGTL 147 (464)
T ss_dssp SSSCEEEEE-CGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT-----HH----HHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEe-ccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH-----HH----HHHHHHHHHHCCCEEEEEE
Confidence 356666552 111 132 345666777889999999999988665443 33 3333333322 22333233
Q ss_pred --eeccCCChHHHHHHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeE--eccCCCHHHH
Q psy10250 275 --AVGELKTSENIYCASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKP--AGGISTFEDS 348 (387)
Q Consensus 275 --Et~~L~t~e~i~~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKa--sGGIrt~~~a 348 (387)
+.+.-.+++...+.++.+.++|||.| |=+.|. .+|..+..++..+ ++.++-.+++.. --|.-.. .+
T Consensus 148 ~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~----~~P~~v~~lv~~l---~~~~~~~i~~H~Hnd~GlAvA-N~ 219 (464)
T 2nx9_A 148 CYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGI----LTPYAAEELVSTL---KKQVDVELHLHCHSTAGLADM-TL 219 (464)
T ss_dssp ECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC----CCHHHHHHHHHHH---HHHCCSCEEEEECCTTSCHHH-HH
T ss_pred EeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC----cCHHHHHHHHHHH---HHhcCCeEEEEECCCCChHHH-HH
Confidence 44444467888899999999999964 556664 6788777665555 445554555554 1222222 22
Q ss_pred HHHHHHHHHhcCCCccCCCcceee
Q psy10250 349 VRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 349 ~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
+.-+ ++|+++++....=+|
T Consensus 220 laAv-----~AGa~~VD~ti~g~g 238 (464)
T 2nx9_A 220 LKAI-----EAGVDRVDTAISSMS 238 (464)
T ss_dssp HHHH-----HTTCSEEEEBCGGGC
T ss_pred HHHH-----HhCCCEEEEeccccC
Confidence 3333 589987755444343
No 221
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.78 E-value=22 Score=33.76 Aligned_cols=82 Identities=12% Similarity=0.089 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcC-ChhHHHHHHHHHHHHhCCC--cceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEK--IHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g-~~~~v~~Ei~~v~~~~~~~--~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
..+.-+..+++.++.|||=||+-.--.. -| ..-...+|+++++.....- ..+.+-|.|. ..+ ..+.|+
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestr--pga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~---~~~----va~aAl 97 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSR--PGATRVDPAVETSRVIPVVKELAAQGITVSIDTM---RAD----VARAAL 97 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHTTCCEEEECS---CHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCC--CCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCC---CHH----HHHHHH
Confidence 5777888899999999999999752211 01 1122345555554443210 0244556553 223 345577
Q ss_pred HcCCCEEEcCCCCC
Q psy10250 294 FAGSDFIKTSTGKE 307 (387)
Q Consensus 294 ~aGaDfVKTSTGf~ 307 (387)
++|++.|.--+|+.
T Consensus 98 ~aGa~iINdvsg~~ 111 (280)
T 1eye_A 98 QNGAQMVNDVSGGR 111 (280)
T ss_dssp HTTCCEEEETTTTS
T ss_pred HcCCCEEEECCCCC
Confidence 88999999888863
No 222
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=86.76 E-value=12 Score=39.03 Aligned_cols=149 Identities=14% Similarity=0.115 Sum_probs=87.9
Q ss_pred CCceEEEEecCCC--CCC--CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEE
Q psy10250 200 DDVKVASVAAGFP--SGQ--YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTIL 274 (387)
Q Consensus 200 ~~v~v~tVvigFP--~G~--~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIl 274 (387)
.++++.+. +==| .|+ .+-++...-++.+++.|++.|-+....+.+ +. +...++.+.. +..+.+.+
T Consensus 95 ~~~~l~~L-~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~-----~n----i~~~i~~ak~~G~~v~~~i 164 (539)
T 1rqb_A 95 PNSRLQML-LRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP-----RN----MAHAMAAVKKAGKHAQGTI 164 (539)
T ss_dssp TTSCEEEE-ECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT-----HH----HHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEE-eccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH-----HH----HHHHHHHHHHCCCeEEEEE
Confidence 35777665 2001 133 245567777899999999999988665544 22 3444444422 23444455
Q ss_pred --eeccCCChHHHHHHHHHHHHcCCCEE--EcCCCCCCCCCChhhhHhHHHHHHHHHHHcC--CCceEeEe--ccCCCHH
Q psy10250 275 --AVGELKTSENIYCASMTAMFAGSDFI--KTSTGKEKTNATIPAGIIMCSAIKHFHKLSG--KKIGLKPA--GGISTFE 346 (387)
Q Consensus 275 --Et~~L~t~e~i~~a~~ia~~aGaDfV--KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~--~~~gIKas--GGIrt~~ 346 (387)
|.+.-.+++...+.++.+.++|+|.| +-..|. .+|..+..++..+ ++.++ -.+++..= -|.-..
T Consensus 165 ~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~----~~P~~v~~lv~~l---~~~~p~~i~I~~H~Hnd~GlAvA- 236 (539)
T 1rqb_A 165 CYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAAL----LKPQPAYDIIKAI---KDTYGQKTQINLHCHSTTGVTEV- 236 (539)
T ss_dssp ECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCC----CCHHHHHHHHHHH---HHHHCTTCCEEEEEBCTTSCHHH-
T ss_pred EeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC----cCHHHHHHHHHHH---HHhcCCCceEEEEeCCCCChHHH-
Confidence 55555577888899999999999964 556664 6787776665444 55564 34555541 222222
Q ss_pred HHHHHHHHHHHhcCCCccCCCccee
Q psy10250 347 DSVRWIYLVLIMLGPDWLNKDLFRI 371 (387)
Q Consensus 347 ~a~~~i~l~~~~~Ga~w~~~~~~RI 371 (387)
.++.-+ ++|+++++....=+
T Consensus 237 N~laAv-----eAGa~~VD~ti~g~ 256 (539)
T 1rqb_A 237 SLMKAI-----EAGVDVVDTAISSM 256 (539)
T ss_dssp HHHHHH-----HTTCSEEEEBCGGG
T ss_pred HHHHHH-----HhCCCEEEEecccc
Confidence 222223 58998765444433
No 223
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=86.69 E-value=6.6 Score=38.50 Aligned_cols=140 Identities=11% Similarity=0.037 Sum_probs=92.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|..+.+.-..+++.+++.|.+-|++=+ | ++.+.-.+-+++|++++++ -+.+.+....--+.++-.+.++...
T Consensus 142 ~~~~~e~~~~~a~~~~~~G~~~iKiK~--G----~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~a~~~~~~l~ 213 (378)
T 3eez_A 142 GAKSVEETRAVIDRYRQRGYVAHSVKI--G----GDVERDIARIRDVEDIREP--GEIVLYDVNRGWTRQQALRVMRATE 213 (378)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEEC--C----SCHHHHHHHHHHHTTSCCT--TCEEEEECTTCCCHHHHHHHHHHTG
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEEecc--C----CCHHHHHHHHHHHHHHcCC--CceEEEECCCCCCHHHHHHHHHHhc
Confidence 456778788889999999999998743 3 2455555666777776654 3566777643336677667777777
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
+.|. ||--..- .. +..+.+++.+ .+.|=+-+.+.+.+++..++. .-+++.++++..|+|.
T Consensus 214 ~~~i-~iEqP~~------~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~----~~~~d~v~ik~~~~GG 273 (378)
T 3eez_A 214 DLHV-MFEQPGE------TL-------DDIAAIRPLH--SAPVSVDECLVTLQDAARVAR----DGLAEVFGIKLNRVGG 273 (378)
T ss_dssp GGTC-CEECCSS------SH-------HHHHHTGGGC--CCCEEECTTCCSHHHHHHHHH----TTCCSEEEEEHHHHTS
T ss_pred cCCe-EEecCCC------CH-------HHHHHHHhhC--CCCEEECCCCCCHHHHHHHHH----cCCCCEEEeCchhcCC
Confidence 8899 9974321 23 3444444332 455666667899999999995 3346777888888864
Q ss_pred -cchHHHHH
Q psy10250 374 -SSLLNNIL 381 (387)
Q Consensus 374 -Ss~~~il~ 381 (387)
+..+++..
T Consensus 274 it~~~~ia~ 282 (378)
T 3eez_A 274 LTRAARMRD 282 (378)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 44444443
No 224
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.61 E-value=14 Score=35.41 Aligned_cols=98 Identities=12% Similarity=0.185 Sum_probs=58.1
Q ss_pred CceEEEEecC-----CCCCCCC--HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHH---HHhCCCcce
Q psy10250 201 DVKVASVAAG-----FPSGQYL--LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMK---EKCGEKIHM 270 (387)
Q Consensus 201 ~v~v~tVvig-----FP~G~~~--~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~---~~~~~~~~l 270 (387)
.+.|-.+ ++ |..|... .+.-+..+++.+++|||=||+-.--..--. ..-...+|++++. ++.....-+
T Consensus 39 ~~~iMgi-lNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga-~~v~~~eE~~RvvpvI~~l~~~~~v 116 (297)
T 1tx2_A 39 KTLIMGI-LNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGF-AKVSVEEEIKRVVPMIQAVSKEVKL 116 (297)
T ss_dssp SCEEEEE-CCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----C-CCCCHHHHHHHHHHHHHHHHHHSCS
T ss_pred CCEEEEE-EeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCC-CCCCHHHHHHHHHHHHHHHHhcCCc
Confidence 4566666 45 5555433 566677789999999999999853221111 2223466776666 333210124
Q ss_pred EEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC
Q psy10250 271 KTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE 307 (387)
Q Consensus 271 KvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~ 307 (387)
.+.|.|. ..+ . .+.|.++|++.|..-+|+.
T Consensus 117 piSIDT~---~~~-V---~~aAl~aGa~iINdvsg~~ 146 (297)
T 1tx2_A 117 PISIDTY---KAE-V---AKQAIEAGAHIINDIWGAK 146 (297)
T ss_dssp CEEEECS---CHH-H---HHHHHHHTCCEEEETTTTS
T ss_pred eEEEeCC---CHH-H---HHHHHHcCCCEEEECCCCC
Confidence 5667764 333 3 3446666999998888863
No 225
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.59 E-value=1.3 Score=42.04 Aligned_cols=86 Identities=9% Similarity=0.023 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHcCCC---eeeeecchhHHh-----cCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHH
Q psy10250 8 LLETRLHEIELLAKQKVD---EVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYA 79 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~---EiD~Vin~~~lk-----~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a 79 (387)
..+.=..-++.+.+.|+| -|++=+.....+ .++.+.+.+-++++++.++-.+.+|+ .+.+ +.+++.+.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~---~~~~-~~~~~~~~ 179 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM---PPYF-DIAHFDTA 179 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE---CCCC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE---CCCC-CHHHHHHH
Confidence 444444556666667777 666533211222 23667788888888887753455664 4445 67788888
Q ss_pred HHHHHHcC-CCEEecCCCC
Q psy10250 80 SMTAMFAG-SDFIKTSTGK 97 (387)
Q Consensus 80 ~~~a~~ag-~dfvKTSTG~ 97 (387)
++.+.++| +|||..+.+.
T Consensus 180 a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 180 AAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp HHHHHTCTTEEEEEECCCE
T ss_pred HHHHHhcCCceEEEEeCCC
Confidence 99999999 9999977653
No 226
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=86.51 E-value=22 Score=34.70 Aligned_cols=144 Identities=10% Similarity=0.088 Sum_probs=97.0
Q ss_pred CCCCHHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
|..+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++|+++.++. +.+.+....=-+.++-.+.++..
T Consensus 145 ~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~a~g~~--~~l~vDan~~~~~~~A~~~~~~l 217 (383)
T 3i4k_A 145 GVLPLDVAVAEIEERIEEFGNRSFKLKMGA-----GDPAEDTRRVAELAREVGDR--VSLRIDINARWDRRTALHYLPIL 217 (383)
T ss_dssp CSCCHHHHHHHHHHHHHHHCCSEEEEECCS-----SCHHHHHHHHHHHHHTTTTT--SEEEEECTTCSCHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHhcCCcEEEEeeCC-----CCHHHHHHHHHHHHHHcCCC--CEEEEECCCCCCHHHHHHHHHHH
Confidence 345677778889999998 99988764321 24555566677888877752 45666654332667777788888
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
.+.|.+||--+.- +++. +..+.+++.+ .+.|=+-+.+.+.+++..++. .-+++.++++..|+|
T Consensus 218 ~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~~k~~~~G 280 (383)
T 3i4k_A 218 AEAGVELFEQPTP-------ADDL----ETLREITRRT--NVSVMADESVWTPAEALAVVK----AQAADVIALKTTKHG 280 (383)
T ss_dssp HHTTCCEEESCSC-------TTCH----HHHHHHHHHH--CCEEEESTTCSSHHHHHHHHH----HTCCSEEEECTTTTT
T ss_pred HhcCCCEEECCCC-------hhhH----HHHHHHHhhC--CCCEEecCccCCHHHHHHHHH----cCCCCEEEEcccccC
Confidence 8899999985432 1111 3445555544 366666667899999999995 234788888888986
Q ss_pred c-cchHHHHH
Q psy10250 373 A-SSLLNNIL 381 (387)
Q Consensus 373 t-Ss~~~il~ 381 (387)
. +..+++..
T Consensus 281 Git~~~~ia~ 290 (383)
T 3i4k_A 281 GLLESKKIAA 290 (383)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4 55555544
No 227
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=86.35 E-value=8.5 Score=35.65 Aligned_cols=128 Identities=17% Similarity=0.216 Sum_probs=78.6
Q ss_pred HHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhC
Q psy10250 186 VVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG 265 (387)
Q Consensus 186 v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~ 265 (387)
.....+.|.. .+|..|+ -+ .+.+.=+.-++.+++-|++-|.+-++-. + -.+-|+++++..+
T Consensus 24 m~~~~~~l~~------~~vv~Vi----r~-~~~~~a~~~a~al~~gGi~~iEvt~~t~-----~---a~e~I~~l~~~~~ 84 (232)
T 4e38_A 24 MSTINNQLKA------LKVIPVI----AI-DNAEDIIPLGKVLAENGLPAAEITFRSD-----A---AVEAIRLLRQAQP 84 (232)
T ss_dssp HHHHHHHHHH------HCEEEEE----CC-SSGGGHHHHHHHHHHTTCCEEEEETTST-----T---HHHHHHHHHHHCT
T ss_pred HHHHHHHHHh------CCEEEEE----Ec-CCHHHHHHHHHHHHHCCCCEEEEeCCCC-----C---HHHHHHHHHHhCC
Confidence 4445555553 3566675 22 2234455667788899999999976632 2 2355666776665
Q ss_pred CCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCH
Q psy10250 266 EKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTF 345 (387)
Q Consensus 266 ~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~ 345 (387)
+ +.+---| .| +.++ .+.|+++|||||-++ | .+++ .++..++ -|+..-=|+.|.
T Consensus 85 ~---~~iGaGT-Vl-t~~~----a~~Ai~AGA~fIvsP-~-----~~~~-------vi~~~~~-----~gi~~ipGv~Tp 137 (232)
T 4e38_A 85 E---MLIGAGT-IL-NGEQ----ALAAKEAGATFVVSP-G-----FNPN-------TVRACQE-----IGIDIVPGVNNP 137 (232)
T ss_dssp T---CEEEEEC-CC-SHHH----HHHHHHHTCSEEECS-S-----CCHH-------HHHHHHH-----HTCEEECEECSH
T ss_pred C---CEEeECC-cC-CHHH----HHHHHHcCCCEEEeC-C-----CCHH-------HHHHHHH-----cCCCEEcCCCCH
Confidence 3 2333333 44 5554 467899999999753 3 2443 2222222 255555589999
Q ss_pred HHHHHHHHHHHHhcCCCcc
Q psy10250 346 EDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 346 ~~a~~~i~l~~~~~Ga~w~ 364 (387)
.++..-+ ++|++++
T Consensus 138 tEi~~A~-----~~Gad~v 151 (232)
T 4e38_A 138 STVEAAL-----EMGLTTL 151 (232)
T ss_dssp HHHHHHH-----HTTCCEE
T ss_pred HHHHHHH-----HcCCCEE
Confidence 9999998 5999765
No 228
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.90 E-value=4.6 Score=37.41 Aligned_cols=143 Identities=13% Similarity=0.087 Sum_probs=90.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhh-cCChhHHHHHHHHHHHHhCCCcceEEEEeecc--CCChHHHH
Q psy10250 210 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVL-NNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--LKTSENIY 286 (387)
Q Consensus 210 gFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk-~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~--L~t~e~i~ 286 (387)
+|-....-.+.-..+++.+.+.|||.+ | +|.|. +|..|. +-++++.+++++ +.|.+=-.. .. ...-.
T Consensus 67 dF~Ys~~E~~~M~~Di~~~~~~GadGv--V--~G~Lt~dg~iD~--~~~~~Li~~a~~---~~vTFHRAFD~~~-~~d~~ 136 (224)
T 2bdq_A 67 NFVYNDLELRIMEEDILRAVELESDAL--V--LGILTSNNHIDT--EAIEQLLPATQG---LPLVFHMAFDVIP-KSDQK 136 (224)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEE--E--ECCBCTTSSBCH--HHHHHHHHHHTT---CCEEECGGGGGSC-TTTHH
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCCEE--E--EeeECCCCCcCH--HHHHHHHHHhCC---CeEEEECchhccC-CcCHH
Confidence 677666678888899999999999985 3 24443 344442 335566677764 455553332 20 02245
Q ss_pred HHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCC
Q psy10250 287 CASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 366 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~ 366 (387)
+|-+..++.|.+-|=||=|.... +..+.. +.++.+.+..++++.|-+-|||+.-+- ..+++ ..|..++..
T Consensus 137 ~ale~L~~lGv~rILTSG~~~~~--~a~~g~---~~L~~Lv~~a~~ri~Im~GgGV~~~Ni-~~l~~----~tGv~e~H~ 206 (224)
T 2bdq_A 137 KSIDQLVALGFTRILLHGSSNGE--PIIENI---KHIKALVEYANNRIEIMVGGGVTAENY-QYICQ----ETGVKQAHG 206 (224)
T ss_dssp HHHHHHHHTTCCEEEECSCSSCC--CGGGGH---HHHHHHHHHHTTSSEEEECSSCCTTTH-HHHHH----HHTCCEEEE
T ss_pred HHHHHHHHcCCCEEECCCCCCCC--cHHHHH---HHHHHHHHhhCCCeEEEeCCCCCHHHH-HHHHH----hhCCCEEcc
Confidence 67888999999999999875331 122222 345666666788999999999986443 34553 578866544
Q ss_pred Ccceee
Q psy10250 367 DLFRIG 372 (387)
Q Consensus 367 ~~~RIG 372 (387)
.....+
T Consensus 207 s~i~~~ 212 (224)
T 2bdq_A 207 TRITQM 212 (224)
T ss_dssp TTCC--
T ss_pred ccccCC
Confidence 333333
No 229
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=85.82 E-value=22 Score=34.60 Aligned_cols=146 Identities=10% Similarity=0.052 Sum_probs=97.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHH
Q psy10250 211 FPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASM 290 (387)
Q Consensus 211 FP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ 290 (387)
+..|..+.+.-+.+++.+++.|.+-+-+=+. .+.+.-.+-+++|+++.++. +.+.+....=-+.++-.+.++
T Consensus 134 ~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG------~~~~~d~~~v~avR~~~g~~--~~l~vDaN~~~~~~~A~~~~~ 205 (368)
T 3q45_A 134 YTVSIDEPHKMAADAVQIKKNGFEIIKVKVG------GSKELDVERIRMIREAAGDS--ITLRIDANQGWSVETAIETLT 205 (368)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTCSEEEEECC------SCHHHHHHHHHHHHHHHCSS--SEEEEECTTCBCHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHcCCCeEEEEec------CCHHHHHHHHHHHHHHhCCC--CeEEEECCCCCChHHHHHHHH
Confidence 3345567888889999999999998876442 23455556677888888753 456666533226677667778
Q ss_pred HHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcce
Q psy10250 291 TAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFR 370 (387)
Q Consensus 291 ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~R 370 (387)
...+.|.+||--+.- +++.. ..+.+++.+ .+.|=+-+.+.+..++..++. .-+++.++++..|
T Consensus 206 ~l~~~~i~~iEqP~~-------~~~~~----~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~----~~~~d~v~~k~~~ 268 (368)
T 3q45_A 206 LLEPYNIQHCEEPVS-------RNLYT----ALPKIRQAC--RIPIMADESCCNSFDAERLIQ----IQACDSFNLKLSK 268 (368)
T ss_dssp HHGGGCCSCEECCBC-------GGGGG----GHHHHHHTC--SSCEEESTTCCSHHHHHHHHH----TTCCSEEEECTTT
T ss_pred HHhhcCCCEEECCCC-------hhHHH----HHHHHHhhC--CCCEEEcCCcCCHHHHHHHHH----cCCCCeEEechhh
Confidence 788899999985432 22221 233444432 455666667899999999995 3457778888888
Q ss_pred eec-cchHHHHH
Q psy10250 371 IGA-SSLLNNIL 381 (387)
Q Consensus 371 IGt-Ss~~~il~ 381 (387)
+|. +..+++..
T Consensus 269 ~GGit~~~~i~~ 280 (368)
T 3q45_A 269 SAGITNALNIIR 280 (368)
T ss_dssp TTSHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 854 55555544
No 230
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=85.79 E-value=29 Score=34.19 Aligned_cols=147 Identities=10% Similarity=0.113 Sum_probs=99.0
Q ss_pred CCCHHHHHHHH-HHHHHCCCCeeeeecCchh-hhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 215 QYLLETRLHEI-ELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 215 ~~~~e~K~~Ea-~~Ai~~GAdEID~Vin~~~-lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
..+.+.-..++ +.+++.|.+-+-+=+.... ....+.+.-.+=+++|+++.++. +.+++....--+.++-.+.++..
T Consensus 137 ~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~--~~l~vDaN~~~~~~~A~~~~~~L 214 (393)
T 4dwd_A 137 ARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPD--AVIGFDANNGYSVGGAIRVGRAL 214 (393)
T ss_dssp SSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTT--CCEEEECTTCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCC--CeEEEECCCCCCHHHHHHHHHHH
Confidence 35577778888 8999999999887442100 00114555666677888888753 45666654322667777778888
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
.+.|.+||--...- ..+ +..+.+++.+ .+.|=+-+.+.+..++..++. .|+++++++..|+|
T Consensus 215 ~~~~i~~iEqP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~-----~~~d~v~~k~~~~G 276 (393)
T 4dwd_A 215 EDLGYSWFEEPVQH----YHV-------GAMGEVAQRL--DITVSAGEQTYTLQALKDLIL-----SGVRMVQPDIVKMG 276 (393)
T ss_dssp HHTTCSEEECCSCT----TCH-------HHHHHHHHHC--SSEEEBCTTCCSHHHHHHHHH-----HTCCEECCCTTTTT
T ss_pred HhhCCCEEECCCCc----ccH-------HHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH-----cCCCEEEeCccccC
Confidence 88999999865421 122 3445555543 466666667899999999994 55999999999996
Q ss_pred c-cchHHHHH
Q psy10250 373 A-SSLLNNIL 381 (387)
Q Consensus 373 t-Ss~~~il~ 381 (387)
. +.++++..
T Consensus 277 Git~~~~ia~ 286 (393)
T 4dwd_A 277 GITGMMQCAA 286 (393)
T ss_dssp HHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4 55655554
No 231
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=85.67 E-value=24 Score=35.04 Aligned_cols=146 Identities=9% Similarity=-0.015 Sum_probs=97.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhh---hcC------ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLV---LNN------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENI 285 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l---k~g------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i 285 (387)
..+.+.-+.+++.+++.|.+-+-+= ++.- ..| +.+...+=+++|++++++ -+.+.+....--+.++-
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK--~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~--d~~l~vDaN~~~~~~~A 217 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFD--PAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGS--KADLLFGTHGQMVPSSA 217 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEC--CSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT--SSEEEECCCSCBCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEC--CCCCCccccccccchhhHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHH
Confidence 4577888888999999999998773 2210 001 134445566778888875 25666766433366777
Q ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 286 YCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
.+.++...+.|.+||--+.-- -.+ +..+.+++.+ .+.|=+-+.+.+..++..++. .-.++.++
T Consensus 218 ~~~~~~L~~~~i~~iEeP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~ 280 (412)
T 4e4u_A 218 IRLAKRLEKYDPLWFEEPVPP----GQE-------EAIAQVAKHT--SIPIATGERLTTKYEFHKLLQ----AGGASILQ 280 (412)
T ss_dssp HHHHHHHGGGCCSEEECCSCS----SCH-------HHHHHHHHTC--SSCEEECTTCCHHHHHHHHHH----TTCCSEEC
T ss_pred HHHHHHhhhcCCcEEECCCCh----hhH-------HHHHHHHhhC--CCCEEecCccCCHHHHHHHHH----cCCCCEEE
Confidence 778888888999999865421 122 3445555543 466766677899999999995 23478889
Q ss_pred CCcceeec-cchHHHHH
Q psy10250 366 KDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 366 ~~~~RIGt-Ss~~~il~ 381 (387)
++..|+|. +.++++..
T Consensus 281 ~d~~~~GGit~~~kia~ 297 (412)
T 4e4u_A 281 LNVARVGGLLEAKKIAT 297 (412)
T ss_dssp CCTTTTTSHHHHHHHHH
T ss_pred eCccccCCHHHHHHHHH
Confidence 99999954 55555544
No 232
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=85.65 E-value=16 Score=35.69 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC-hHHHHHHHHHHHHcCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT-SENIYCASMTAMFAGS 297 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t-~e~i~~a~~ia~~aGa 297 (387)
+.-..+++.+++.|.+-+.+=+. .. .++.+.-.+=+++|++++++ -+.+.+....=-+ .++-.+.++...+.|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g--~~-g~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~d~~~A~~~~~~l~~~~i 222 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGG--VM-GDDPDTDYAIVKAVREAAGP--EMEVQIDLASKWHTCGHSAMMAKRLEEFNL 222 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECT--TT-TSCHHHHHHHHHHHHHHHCS--SSEEEEECTTTTCSHHHHHHHHHHSGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEeccC--CC-CCCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCCHHHHHHHHHHhhhcCc
Confidence 66678899999999999886442 11 13566677778888888875 3566777643225 6777777787888899
Q ss_pred CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee-ccch
Q psy10250 298 DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG-ASSL 376 (387)
Q Consensus 298 DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG-tSs~ 376 (387)
+||--+.-- ..+ +..+.+++.+ .+.|=+-+-+.+..++..++. .-+++.++++..|+| -+..
T Consensus 223 ~~iEqP~~~----~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~----~~~~d~v~~k~~~~GGit~~ 285 (374)
T 3sjn_A 223 NWIEEPVLA----DSL-------ISYEKLSRQV--SQKIAGGESLTTRYEFQEFIT----KSNADIVQPDITRCGGITEM 285 (374)
T ss_dssp SEEECSSCT----TCH-------HHHHHHHHHC--SSEEEECTTCCHHHHHHHHHH----HHCCSEECCBTTTSSHHHHH
T ss_pred eEEECCCCc----ccH-------HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH----cCCCCEEEeCccccCCHHHH
Confidence 999865421 122 3455555543 466666677899999999995 346788999999996 4556
Q ss_pred HHHHHH
Q psy10250 377 LNNILQ 382 (387)
Q Consensus 377 ~~il~~ 382 (387)
+++..-
T Consensus 286 ~~ia~~ 291 (374)
T 3sjn_A 286 KKIYDI 291 (374)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 233
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=85.46 E-value=8.8 Score=37.20 Aligned_cols=142 Identities=10% Similarity=0.070 Sum_probs=95.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|..+.+.-..+++.+++.|.+-+.+=+. .+.+.-.+-+++|+++.++ -+++.+....-=+.++-.+.++...
T Consensus 137 ~~~~~~~~~~~a~~~~~~G~~~~K~K~G------~~~~~d~~~v~avR~~~g~--~~~l~vDan~~~~~~~a~~~~~~l~ 208 (356)
T 3ro6_B 137 GIKPVEETLAEAREHLALGFRVLKVKLC------GDEEQDFERLRRLHETLAG--RAVVRVDPNQSYDRDGLLRLDRLVQ 208 (356)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEECC------SCHHHHHHHHHHHHHHHTT--SSEEEEECTTCCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEEeC------CCHHHHHHHHHHHHHHhCC--CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 4567888888999999999999887442 2455666667888888865 3567777643336677777788888
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc--CCCccCCCccee
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML--GPDWLNKDLFRI 371 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~--Ga~w~~~~~~RI 371 (387)
+.|.+||--+.. + ..+ +..+.+++.+ .+.|=+-+-+.+..++..++ .. +++.++++..|+
T Consensus 209 ~~~i~~iEqP~~--~--~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~-----~~~~~~d~v~~k~~~~ 270 (356)
T 3ro6_B 209 ELGIEFIEQPFP--A--GRT-------DWLRALPKAI--RRRIAADESLLGPADAFALA-----APPAACGIFNIKLMKC 270 (356)
T ss_dssp HTTCCCEECCSC--T--TCH-------HHHHTSCHHH--HHTEEESTTCCSHHHHHHHH-----SSSCSCSEEEECHHHH
T ss_pred hcCCCEEECCCC--C--CcH-------HHHHHHHhcC--CCCEEeCCcCCCHHHHHHHH-----hcCCcCCEEEEccccc
Confidence 899999985442 1 122 2333333322 35566666789999999998 34 477778888888
Q ss_pred ec-cchHHHHH
Q psy10250 372 GA-SSLLNNIL 381 (387)
Q Consensus 372 Gt-Ss~~~il~ 381 (387)
|. +..+++..
T Consensus 271 GGit~~~~i~~ 281 (356)
T 3ro6_B 271 GGLAPARRIAT 281 (356)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 64 55555543
No 234
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=85.20 E-value=4.1 Score=37.53 Aligned_cols=88 Identities=9% Similarity=0.077 Sum_probs=54.9
Q ss_pred eEEEEeeccCCChHHHHHHHHHHHHcC-CCEE---EcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCH
Q psy10250 270 MKTILAVGELKTSENIYCASMTAMFAG-SDFI---KTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTF 345 (387)
Q Consensus 270 lKvIlEt~~L~t~e~i~~a~~ia~~aG-aDfV---KTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~ 345 (387)
+|+-+...-= |+.+.. +-..+.| +|+| --..||+....-+ .+++.|+.+++..+ .+.|=+.|||. .
T Consensus 115 ~k~gvalnp~-tp~~~~---~~~l~~g~~D~VlvmsV~pGf~gq~f~~----~~l~ki~~lr~~~~-~~~I~VdGGI~-~ 184 (227)
T 1tqx_A 115 LWCGISIKPK-TDVQKL---VPILDTNLINTVLVMTVEPGFGGQSFMH----DMMGKVSFLRKKYK-NLNIQVDGGLN-I 184 (227)
T ss_dssp CEEEEEECTT-SCGGGG---HHHHTTTCCSEEEEESSCTTCSSCCCCG----GGHHHHHHHHHHCT-TCEEEEESSCC-H
T ss_pred CeEEEEeCCC-CcHHHH---HHHhhcCCcCEEEEeeeccCCCCcccch----HHHHHHHHHHHhcc-CCeEEEECCCC-H
Confidence 5666665322 332221 2234455 9999 6677887432222 24467788887765 67888899998 6
Q ss_pred HHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 346 EDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 346 ~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
+++..++ .+|++++-.|..-++
T Consensus 185 ~ti~~~~-----~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 185 ETTEISA-----SHGANIIVAGTSIFN 206 (227)
T ss_dssp HHHHHHH-----HHTCCEEEESHHHHT
T ss_pred HHHHHHH-----HcCCCEEEEeHHHhC
Confidence 7888888 589986444444343
No 235
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=84.86 E-value=16 Score=33.38 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=76.4
Q ss_pred EEEEecCCCCCCCCHHHHHHH-HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee-----c
Q psy10250 204 VASVAAGFPSGQYLLETRLHE-IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV-----G 277 (387)
Q Consensus 204 v~tVvigFP~G~~~~e~K~~E-a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt-----~ 277 (387)
|.++ =+.|.+-........+ ++.+.+.||.-|-+ +. .++|+++++.+.-| ++.++-.. -
T Consensus 21 ivsc-q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~---------~~----~~~i~~ir~~v~~P-vig~~k~~~~~~~~ 85 (229)
T 3q58_A 21 IVSC-QPVPGSPMDKPEIVAAMAQAAASAGAVAVRI---------EG----IENLRTVRPHLSVP-IIGIIKRDLTGSPV 85 (229)
T ss_dssp EEEC-CCCTTSTTCSHHHHHHHHHHHHHTTCSEEEE---------ES----HHHHHHHGGGCCSC-EEEECBCCCSSCCC
T ss_pred EEEE-eCCCCCCCCCcchHHHHHHHHHHCCCcEEEE---------CC----HHHHHHHHHhcCCC-EEEEEeecCCCCce
Confidence 4455 3788777665555555 45555568999875 11 46788888876432 23222221 1
Q ss_pred cCC-ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 278 ELK-TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 278 ~L~-t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
+++ +.+++ +.+.++|+|+|=..+.....+.++. +-++.+++ .|+.+-..++|.+++....
T Consensus 86 ~I~~~~~~i----~~~~~aGad~I~l~~~~~~~p~~l~------~~i~~~~~-----~g~~v~~~v~t~eea~~a~---- 146 (229)
T 3q58_A 86 RITPYLQDV----DALAQAGADIIAFDASFRSRPVDID------SLLTRIRL-----HGLLAMADCSTVNEGISCH---- 146 (229)
T ss_dssp CBSCSHHHH----HHHHHHTCSEEEEECCSSCCSSCHH------HHHHHHHH-----TTCEEEEECSSHHHHHHHH----
T ss_pred EeCccHHHH----HHHHHcCCCEEEECccccCChHHHH------HHHHHHHH-----CCCEEEEecCCHHHHHHHH----
Confidence 231 22344 3468899999976555432223333 23444443 2677778999999999998
Q ss_pred HhcCCCcc
Q psy10250 357 IMLGPDWL 364 (387)
Q Consensus 357 ~~~Ga~w~ 364 (387)
.+|++++
T Consensus 147 -~~Gad~I 153 (229)
T 3q58_A 147 -QKGIEFI 153 (229)
T ss_dssp -HTTCSEE
T ss_pred -hCCCCEE
Confidence 5999876
No 236
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=84.79 E-value=27 Score=34.12 Aligned_cols=146 Identities=8% Similarity=-0.022 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecC----chhh-hc--------CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQ----RSLV-LN--------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin----~~~l-k~--------g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
+.+.-..+++.+++.|.+-+.+=+- .|.+ .+ .+.+...+=+++|++++++ -+.+++...---+.+
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~--d~~l~vDan~~~~~~ 229 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGP--DVDIIAEMHAFTDTT 229 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHH
Confidence 5677778899999999999886321 1211 00 0123344556777787865 356777764332667
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
+-.+.++...+.|.+||--+.- +++ .+..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.
T Consensus 230 ~a~~~~~~l~~~~i~~iE~P~~-------~~~----~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~ 292 (407)
T 2o56_A 230 SAIQFGRMIEELGIFYYEEPVM-------PLN----PAQMKQVADKV--NIPLAAGERIYWRWGYRPFLE----NGSLSV 292 (407)
T ss_dssp HHHHHHHHHGGGCCSCEECSSC-------SSS----HHHHHHHHHHC--CSCEEECTTCCHHHHHHHHHH----TTCCSE
T ss_pred HHHHHHHHHHhcCCCEEeCCCC-------hhh----HHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHH----cCCCCE
Confidence 7777788888899999985531 111 13455555554 466777778899999999995 334788
Q ss_pred cCCCcceeec-cchHHHHH
Q psy10250 364 LNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 364 ~~~~~~RIGt-Ss~~~il~ 381 (387)
++++..++|. +.++++..
T Consensus 293 v~ik~~~~GGite~~~i~~ 311 (407)
T 2o56_A 293 IQPDICTCGGITEVKKICD 311 (407)
T ss_dssp ECCCTTTTTHHHHHHHHHH
T ss_pred EecCccccCCHHHHHHHHH
Confidence 8999999965 55555544
No 237
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=84.62 E-value=6.9 Score=38.00 Aligned_cols=148 Identities=6% Similarity=-0.115 Sum_probs=96.1
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++... ++. .+.+.-..+++.+.+.|.+-+.+ +.+ ++.+...+=+++|++++++ -+.+.+....--
T Consensus 135 ~vp~~~~-~~~----~~~~~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~g~--~~~l~vDan~~~ 201 (371)
T 2ps2_A 135 RLPLISS-IYV----GEPEDMRARVAKYRAKGYKGQSV--KIS----GEPVTDAKRITAALANQQP--DEFFIVDANGKL 201 (371)
T ss_dssp CEEBEEE-ECS----CCHHHHHHHHHHHHTTTCCEEEE--ECC----SCHHHHHHHHHHHTTTCCT--TCEEEEECTTBC
T ss_pred ceEEEEE-eCC----CCHHHHHHHHHHHHHhChheEEe--ecC----CCHHHHHHHHHHHHHhcCC--CCEEEEECCCCc
Confidence 5666555 242 36677778899999999999885 333 2455555666677776664 245566654322
Q ss_pred ChHHHHHHHHHH-HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 281 TSENIYCASMTA-MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 281 t~e~i~~a~~ia-~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
+.++-.+.++.. .+.|. ||--+.- .. +..+.+++.+ ++.|=+-+.+.+.+++..++. .-
T Consensus 202 ~~~~a~~~~~~l~~~~~i-~iE~P~~------~~-------~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~----~~ 261 (371)
T 2ps2_A 202 SVETALRLLRLLPHGLDF-ALEAPCA------TW-------RECISLRRKT--DIPIIYDELATNEMSIVKILA----DD 261 (371)
T ss_dssp CHHHHHHHHHHSCTTCCC-EEECCBS------SH-------HHHHHHHTTC--CSCEEESTTCCSHHHHHHHHH----HT
T ss_pred CHHHHHHHHHHHHhhcCC-cCcCCcC------CH-------HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH----hC
Confidence 566666666666 77899 9975421 22 3445555433 467777778999999999995 34
Q ss_pred CCCccCCCcceeec-cchHHHHH
Q psy10250 360 GPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 360 Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+++.++++..++|. +..+++..
T Consensus 262 ~~d~v~ik~~~~GGit~~~~i~~ 284 (371)
T 2ps2_A 262 AAEGIDLKISKAGGLTRGRRQRD 284 (371)
T ss_dssp CCSEEEEEHHHHTSHHHHHHHHH
T ss_pred CCCEEEechhhcCCHHHHHHHHH
Confidence 56777888888855 45555443
No 238
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=84.61 E-value=25 Score=32.54 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=77.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeeeecchh---------------HHhcC-ChhHHHHHHHHHHHHcccCccEEEEEec
Q psy10250 4 SGQYLLETRLHEIELLAKQKVDEVDIVIQRS---------------LVLNN-QWPELFSEVKQMKEKCEEKIHMKTILAV 67 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~---------------~lk~g-~~~~v~~ei~~v~~~~~~~~~~KvIlEt 67 (387)
.|.-..+.+..-++...+.|+|-|.+=++++ ++..| +.+.+.+-++++++..++ ++ +++-
T Consensus 25 ~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~-~P--i~~m- 100 (262)
T 2ekc_A 25 VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD-IP--FLLM- 100 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-SC--EEEE-
T ss_pred CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC-CC--EEEE-
Confidence 5777778888889999999999998877765 35555 235566777777765422 34 4442
Q ss_pred cCCCCHHHH---HHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccc-cccCCCCC
Q psy10250 68 GELKTSENI---YYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFID-LTTLSGDD 143 (387)
Q Consensus 68 ~~L~~~e~i---~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID-~T~L~~~~ 143 (387)
+|+ +.-.. .+-++.|.++|+|.+=.+ +++...++.....+++- =++ ..++.|+.
T Consensus 101 ~y~-n~v~~~g~~~f~~~~~~aG~dgvii~-------------------dl~~ee~~~~~~~~~~~--gl~~i~l~~p~t 158 (262)
T 2ekc_A 101 TYY-NPIFRIGLEKFCRLSREKGIDGFIVP-------------------DLPPEEAEELKAVMKKY--VLSFVPLGAPTS 158 (262)
T ss_dssp CCH-HHHHHHCHHHHHHHHHHTTCCEEECT-------------------TCCHHHHHHHHHHHHHT--TCEECCEECTTC
T ss_pred ecC-cHHHHhhHHHHHHHHHHcCCCEEEEC-------------------CCCHHHHHHHHHHHHHc--CCcEEEEeCCCC
Confidence 566 32111 356778899999943321 11212222222232221 023 23467888
Q ss_pred CHHHHHHHHHHhc
Q psy10250 144 TEAVVETLTLKAI 156 (387)
Q Consensus 144 T~~~i~~l~~~A~ 156 (387)
+.+.+.++++.+.
T Consensus 159 ~~~rl~~ia~~a~ 171 (262)
T 2ekc_A 159 TRKRIKLICEAAD 171 (262)
T ss_dssp CHHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCC
Confidence 8999999988876
No 239
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=84.55 E-value=11 Score=36.66 Aligned_cols=155 Identities=14% Similarity=0.119 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCCeeeeecchhHHh----c-------CC--------hhHHHHHHHHHHHHcccCccEEEEEec-----cC
Q psy10250 14 HEIELLAKQKVDEVDIVIQRSLVL----N-------NQ--------WPELFSEVKQMKEKCEEKIHMKTILAV-----GE 69 (387)
Q Consensus 14 ~E~~~a~~~GA~EiD~Vin~~~lk----~-------g~--------~~~v~~ei~~v~~~~~~~~~~KvIlEt-----~~ 69 (387)
.-|+.|.+.|.|-|++=.--|+|. | .. ...+.+=+++|+++++.+.+|-|=|-. +-
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 346788899999999876554443 1 11 234566667888877654334333332 11
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCC-C-CCCHHH
Q psy10250 70 LKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLS-G-DDTEAV 147 (387)
Q Consensus 70 L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~-~-~~T~~~ 147 (387)
+ +.++....++...++|+|||--|.|........+.... ++..+++++.+..+..+.. . -.|.++
T Consensus 236 ~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~------------~~~~~~~~ir~~~~iPVi~~Ggi~t~e~ 302 (349)
T 3hgj_A 236 W-SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPG------------FQVPFADAVRKRVGLRTGAVGLITTPEQ 302 (349)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTT------------TTHHHHHHHHHHHCCEEEECSSCCCHHH
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCcc------------ccHHHHHHHHHHcCceEEEECCCCCHHH
Confidence 3 55677788888899999999998763221111111111 1223444444444443322 2 247899
Q ss_pred HHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhh
Q psy10250 148 VETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLD 194 (387)
Q Consensus 148 i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~ 194 (387)
.++++++-.-.+ . .++ ++..-+|.|+..+++.|.
T Consensus 303 a~~~l~~G~aD~-------V-----~iG-R~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 303 AETLLQAGSADL-------V-----LLG-RVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp HHHHHHTTSCSE-------E-----EES-THHHHCTTHHHHHHHHTT
T ss_pred HHHHHHCCCceE-------E-----Eec-HHHHhCchHHHHHHHHCC
Confidence 888877542000 0 011 112247889988888775
No 240
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=84.50 E-value=21 Score=35.04 Aligned_cols=146 Identities=9% Similarity=-0.036 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecC----chhh-h--------cC-----ChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQ----RSLV-L--------NN-----QWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin----~~~l-k--------~g-----~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
+.+.-..+++.+++.|.+-+.+=+- .|.+ . .| +.+...+=+++|++++++ -+.+.+....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~--d~~l~vDan~ 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGD--DADIIVEIHS 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCS--SSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCC--CCEEEEECCC
Confidence 6777788899999999999885431 1321 0 00 123444556777887865 3566777643
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
--+.++-.+.++...+.|.+||--+.- .... +..+.+++.+ ++.|=+-+.+.+.+++..++. .
T Consensus 228 ~~~~~~ai~~~~~l~~~~i~~iE~P~~----~~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~ 290 (410)
T 2gl5_A 228 LLGTNSAIQFAKAIEKYRIFLYEEPIH----PLNS-------DNMQKVSRST--TIPIATGERSYTRWGYRELLE----K 290 (410)
T ss_dssp CSCHHHHHHHHHHHGGGCEEEEECSSC----SSCH-------HHHHHHHHHC--SSCEEECTTCCTTHHHHHHHH----T
T ss_pred CCCHHHHHHHHHHHHhcCCCeEECCCC----hhhH-------HHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH----c
Confidence 326677777778888889999985531 1122 3455555554 467777778899999999995 3
Q ss_pred cCCCccCCCcceeec-cchHHHHH
Q psy10250 359 LGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 359 ~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
-.++.++++..++|. +.++++..
T Consensus 291 ~~~d~v~ik~~~~GGit~~~~ia~ 314 (410)
T 2gl5_A 291 QSIAVAQPDLCLCGGITEGKKICD 314 (410)
T ss_dssp TCCSEECCCTTTTTHHHHHHHHHH
T ss_pred CCCCEEecCccccCCHHHHHHHHH
Confidence 347888999999965 45555544
No 241
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=84.42 E-value=2 Score=39.67 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=63.5
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE---
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK--- 301 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK--- 301 (387)
++.+.+.|||-|=+ ...++ . ..+.+-++.+++ . -+|+.+...-= |+.+..+ ....++|||-
T Consensus 73 i~~~~~aGAd~itv--h~Ea~--~--~~~~~~i~~i~~-~----G~k~gv~lnp~-tp~~~~~----~~l~~~D~Vlvms 136 (231)
T 3ctl_A 73 IAQLARAGADFITL--HPETI--N--GQAFRLIDEIRR-H----DMKVGLILNPE-TPVEAMK----YYIHKADKITVMT 136 (231)
T ss_dssp HHHHHHHTCSEEEE--CGGGC--T--TTHHHHHHHHHH-T----TCEEEEEECTT-CCGGGGT----TTGGGCSEEEEES
T ss_pred HHHHHHcCCCEEEE--CcccC--C--ccHHHHHHHHHH-c----CCeEEEEEECC-CcHHHHH----HHHhcCCEEEEee
Confidence 57888899987543 33321 1 123444455543 2 25666655322 3322211 1123899997
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
...||+....-++ +++.|+.+++.. +..+.|=+-|||+ .+++..++ .+|+++
T Consensus 137 V~pGfggQ~f~~~----~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~-----~aGAd~ 191 (231)
T 3ctl_A 137 VDPGFAGQPFIPE----MLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLM-----AAGADV 191 (231)
T ss_dssp SCTTCSSCCCCTT----HHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHH-----HHTCCE
T ss_pred eccCcCCccccHH----HHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHH-----HcCCCE
Confidence 5678874322221 234455555443 4468888999998 56677777 589975
No 242
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=84.40 E-value=19 Score=35.50 Aligned_cols=139 Identities=9% Similarity=0.007 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD 298 (387)
+.-..+++.+++.|.+-+.+=+ +. +.+.-.+=+++|+++.++. +.+.+....--+.++-.+.++...+.|.+
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~--g~----~~~~d~~~v~avR~a~g~~--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 228 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKV--GF----DDARDVRNALHVRELLGAA--TPLMADANQGWDLPRARQMAQRLGPAQLD 228 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEEC--SS----CHHHHHHHHHHHHHHHCSS--SCEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEec--CC----CHHHHHHHHHHHHHhcCCC--ceEEEeCCCCCCHHHHHHHHHHHHHhCCC
Confidence 4556788888999999887643 21 4555666778888888753 45566653332667777778888889999
Q ss_pred EEEcCCCCCCCCCC-hhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cch
Q psy10250 299 FIKTSTGKEKTNAT-IPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSL 376 (387)
Q Consensus 299 fVKTSTGf~~~gat-~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~ 376 (387)
||--+... .. + +..+.+++.+ .+.|=+-+.+.+..++..++. .-+++.++++..|+|. +..
T Consensus 229 ~iEeP~~~----~d~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~~k~~~~GGit~~ 291 (392)
T 3ddm_A 229 WLEEPLRA----DRPA-------AEWAELAQAA--PMPLAGGENIAGVAAFETALA----ARSLRVMQPDLAKWGGFSGC 291 (392)
T ss_dssp EEECCSCT----TSCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----HTCEEEECCCTTTTTHHHHH
T ss_pred EEECCCCc----cchH-------HHHHHHHHhc--CCCEEeCCCCCCHHHHHHHHH----cCCCCEEEeCcchhCCHHHH
Confidence 99865421 11 2 3445555543 466777778999999999995 3457888999999954 556
Q ss_pred HHHHHH
Q psy10250 377 LNNILQ 382 (387)
Q Consensus 377 ~~il~~ 382 (387)
+++..-
T Consensus 292 ~~ia~~ 297 (392)
T 3ddm_A 292 LPVARA 297 (392)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 243
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=84.35 E-value=4.4 Score=38.24 Aligned_cols=119 Identities=8% Similarity=-0.016 Sum_probs=69.9
Q ss_pred CCCeEEEEECCc------------cHHHHHHHhhhcCCCCCce---EEEEecCCCCCCCC----HH-------HHHHHHH
Q psy10250 173 NVHTAAVCVYPA------------RVVDVIKVLDRENARDDVK---VASVAAGFPSGQYL----LE-------TRLHEIE 226 (387)
Q Consensus 173 ~~~~~aVcV~P~------------~v~~a~~~L~~~~~~~~v~---v~tVvigFP~G~~~----~e-------~K~~Ea~ 226 (387)
+.||.+|-+.+. .+...++.|+. .+++ ++++ ++||.+... .+ .=...++
T Consensus 42 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~----~gL~~~~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 116 (335)
T 2qw5_A 42 RFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDS----EGLENVKISTN-VGATRTFDPSSNYPEQRQEALEYLKSRVD 116 (335)
T ss_dssp HTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHH----TTCTTCEEEEE-CCCCSSSCTTCSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCEEEEecCCCcccccccchHHHHHHHHHHHH----CCCCcceeEEE-eccCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 678888877632 34566777775 5888 8887 588754322 22 1223456
Q ss_pred HHHHCCCCeeeeecC---chhh-----------------hcCChhHHHHHHHHHHHHhCCCcceEEEEeec------cCC
Q psy10250 227 LLAKQKVDEVDIVIQ---RSLV-----------------LNNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELK 280 (387)
Q Consensus 227 ~Ai~~GAdEID~Vin---~~~l-----------------k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~ 280 (387)
.|.+.|++-| +..- ++.+ ....|+.+.+-++++.+.+.. .-+++-+|+. .+.
T Consensus 117 ~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~ 194 (335)
T 2qw5_A 117 ITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEI-KKVKLAIEPITHWETPGPN 194 (335)
T ss_dssp HHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCEEEECCCCTTTCSSCC
T ss_pred HHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHH-cCCEEEEeeCCcccccccC
Confidence 6778899988 4321 2222 122345556666677666643 3489999983 354
Q ss_pred ChHHHHHHHHHHHHcCCCEEE
Q psy10250 281 TSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVK 301 (387)
+.+++ .++..+.|.+.++
T Consensus 195 t~~~~---~~ll~~v~~~~vg 212 (335)
T 2qw5_A 195 KLSQL---IEFLKGVKSKQVG 212 (335)
T ss_dssp SHHHH---HHHHTTCCCTTEE
T ss_pred CHHHH---HHHHHhcCCCCee
Confidence 54444 4455555655554
No 244
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=84.26 E-value=3 Score=37.45 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 321 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 321 ~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
+.++.+++..+..+.|=+.|||+ .+.+...+ .+|++++-.|..-++.
T Consensus 151 ~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~-----~aGad~ivvG~~I~~a 197 (216)
T 1q6o_A 151 ADITAIKRLSDMGFKVTVTGGLA-LEDLPLFK-----GIPIHVFIAGRSIRDA 197 (216)
T ss_dssp HHHHHHHHHHHTTCEEEEESSCC-GGGGGGGT-----TSCCSEEEESHHHHTS
T ss_pred HHHHHHHHhcCCCCcEEEECCcC-hhhHHHHH-----HcCCCEEEEeehhcCC
Confidence 35666666666567789999999 67787777 6899765444444443
No 245
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=84.22 E-value=35 Score=33.92 Aligned_cols=229 Identities=11% Similarity=-0.041 Sum_probs=117.7
Q ss_pred cEEEEEeccC--CCCHHHHHHHHHHHHHcCCCEEecCCCCCCCC-CCCcccccchhcc-------ccchh--h-hhhHHH
Q psy10250 60 HMKTILAVGE--LKTSENIYYASMTAMFAGSDFIKTSTGKEKTN-ATIPADLTRQFEA-------VDLSR--L-KNKKSL 126 (387)
Q Consensus 60 ~~KvIlEt~~--L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~g-at~~~~~~~~~~~-------~~~~~--~-~~~~~~ 126 (387)
++-+|-|.|- --+.+...+..+.|.++|||.||-.| |-+.. .++. ...+|... =.++. + +++-.+
T Consensus 28 ~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~-~k~~tl~s~~-~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~ 105 (385)
T 1vli_A 28 PVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQM-FQADRMYQKD-PGLYKTAAGKDVSIFSLVQSMEMPAEWILP 105 (385)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECC-BCGGGGTSCC-C---------CCCHHHHGGGBSSCGGGHHH
T ss_pred CcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeee-eccCcccCcc-hhhhccCCCCCccHHHHHHhcCCCHHHHHH
Confidence 5789999973 22456778888999999999999665 22211 0111 11122110 00111 1 111123
Q ss_pred HHHhhcccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECC---ccHHHHHHHhhhcCCCCCce
Q psy10250 127 LLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYP---ARVVDVIKVLDRENARDDVK 203 (387)
Q Consensus 127 ~~~l~~~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P---~~v~~a~~~L~~~~~~~~v~ 203 (387)
+++..+-.....+..-...++++-+ . +|++..+=|.. +..++.++.-+ ++-+
T Consensus 106 L~~~~~~~Gi~~~stpfD~~svd~l-------------~-------~~~vd~~KIgS~~~~N~pLL~~va~-----~gKP 160 (385)
T 1vli_A 106 LLDYCREKQVIFLSTVCDEGSADLL-------------Q-------STSPSAFKIASYEINHLPLLKYVAR-----LNRP 160 (385)
T ss_dssp HHHHHHHTTCEEECBCCSHHHHHHH-------------H-------TTCCSCEEECGGGTTCHHHHHHHHT-----TCSC
T ss_pred HHHHHHHcCCcEEEccCCHHHHHHH-------------H-------hcCCCEEEECcccccCHHHHHHHHh-----cCCe
Confidence 3333333333333333334444322 1 34444444443 35666655433 2333
Q ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 204 VASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 204 v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
|.-- .|..+.+.-..-++...+.|.+.|=+.==++.+=.-..+.=.+-|..+++..++ +.|.+-...+ .+
T Consensus 161 ViLS-----tGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~---lpVG~SdHt~-G~- 230 (385)
T 1vli_A 161 MIFS-----TAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE---AVIGFSDHSE-HP- 230 (385)
T ss_dssp EEEE-----CTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT---SEEEEEECCS-SS-
T ss_pred EEEE-----CCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCC---CCEEeCCCCC-Cc-
Confidence 3222 355677777777777777788754221001111110111112345666666532 4557776666 32
Q ss_pred HHHHHHHHHHHcCCCEEEc-----CCCCC---CCCCChhhhHhHHHHHHHHH
Q psy10250 284 NIYCASMTAMFAGSDFIKT-----STGKE---KTNATIPAGIIMCSAIKHFH 327 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKT-----STGf~---~~gat~~~~~~m~~~v~~~~ 327 (387)
..++..|...||++|-- -+..| +...+|+....|+++||.+.
T Consensus 231 --~~~~~AAvAlGA~iIEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 231 --TEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp --SHHHHHHHHTTCSEEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHcCCCEEEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 45778899999999863 11222 23467888899999999988
No 246
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=84.20 E-value=19 Score=32.89 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=75.9
Q ss_pred EEEEecCCCCCCCCHHHHHHH-HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee-----c
Q psy10250 204 VASVAAGFPSGQYLLETRLHE-IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV-----G 277 (387)
Q Consensus 204 v~tVvigFP~G~~~~e~K~~E-a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt-----~ 277 (387)
|.++ =+.|.+-........+ ++.+.+.||.-|-+ +. .++|+++++.+.-|. +.++-.. -
T Consensus 21 ivsc-q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~---------~~----~~~i~~ir~~v~~Pv-ig~~k~d~~~~~~ 85 (232)
T 3igs_A 21 IVSC-QPVPGSPLDKPEIVAAMALAAEQAGAVAVRI---------EG----IDNLRMTRSLVSVPI-IGIIKRDLDESPV 85 (232)
T ss_dssp EEEC-CCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE---------ES----HHHHHHHHTTCCSCE-EEECBCCCSSCCC
T ss_pred EEEE-eCCCCCCCCCcchHHHHHHHHHHCCCeEEEE---------CC----HHHHHHHHHhcCCCE-EEEEeecCCCcce
Confidence 3445 3788777765555555 45555568998765 11 467888887764321 3211110 1
Q ss_pred cCC-ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHH
Q psy10250 278 ELK-TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 356 (387)
Q Consensus 278 ~L~-t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~ 356 (387)
++. +.+++ +.+.++|+|+|=..+.....+.++. +-++.+++ .|+.+...++|.+++....
T Consensus 86 ~I~~~~~~i----~~~~~~Gad~V~l~~~~~~~p~~l~------~~i~~~~~-----~g~~v~~~v~t~eea~~a~---- 146 (232)
T 3igs_A 86 RITPFLDDV----DALAQAGAAIIAVDGTARQRPVAVE------ALLARIHH-----HHLLTMADCSSVDDGLACQ---- 146 (232)
T ss_dssp CBSCSHHHH----HHHHHHTCSEEEEECCSSCCSSCHH------HHHHHHHH-----TTCEEEEECCSHHHHHHHH----
T ss_pred EeCccHHHH----HHHHHcCCCEEEECccccCCHHHHH------HHHHHHHH-----CCCEEEEeCCCHHHHHHHH----
Confidence 231 22344 3468899999977665432233333 23444443 2677778999999999998
Q ss_pred HhcCCCcc
Q psy10250 357 IMLGPDWL 364 (387)
Q Consensus 357 ~~~Ga~w~ 364 (387)
.+|++++
T Consensus 147 -~~Gad~I 153 (232)
T 3igs_A 147 -RLGADII 153 (232)
T ss_dssp -HTTCSEE
T ss_pred -hCCCCEE
Confidence 5999876
No 247
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=84.12 E-value=16 Score=32.63 Aligned_cols=118 Identities=11% Similarity=0.048 Sum_probs=72.4
Q ss_pred CCCeEEEEECC----------ccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHH---HHHHHHHHHHCCCCeeeee
Q psy10250 173 NVHTAAVCVYP----------ARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLET---RLHEIELLAKQKVDEVDIV 239 (387)
Q Consensus 173 ~~~~~aVcV~P----------~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~---K~~Ea~~Ai~~GAdEID~V 239 (387)
++||.+|-+.+ ..+...++.++. .++++.++-..||++....+. =...++.|.+.|++-|=+.
T Consensus 30 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~----~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~ 105 (272)
T 2q02_A 30 RLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK----YGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLC 105 (272)
T ss_dssp HTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH----TTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HcCCCEEEeeccccccccccccCHHHHHHHHHH----cCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 56777877752 246677888875 689887763346665433221 1233556677899876443
Q ss_pred cCchhhhcCChhHH-HHHHHHHHHHhCCCcceEEEEeec-----cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 240 IQRSLVLNNQWPEL-FSEVKQMKEKCGEKIHMKTILAVG-----ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 240 in~~~lk~g~~~~v-~~Ei~~v~~~~~~~~~lKvIlEt~-----~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
. +......|+.+ .+-++++.+.+.. .-+++-+|+. .+.+.++.. ++..+.| +.++
T Consensus 106 ~--g~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~~E~~~~~~~~~~~~~~~~---~l~~~v~-~~~g 166 (272)
T 2q02_A 106 P--LNDGTIVPPEVTVEAIKRLSDLFAR-YDIQGLVEPLGFRVSSLRSAVWAQ---QLIREAG-SPFK 166 (272)
T ss_dssp C--CCSSBCCCHHHHHHHHHHHHHHHHT-TTCEEEECCCCSTTCSCCCHHHHH---HHHHHHT-CCCE
T ss_pred c--CCCchhHHHHHHHHHHHHHHHHHHH-cCCEEEEEecCCCcccccCHHHHH---HHHHHhC-cCeE
Confidence 2 21122567888 8888888888765 4589999985 444545443 4455555 5444
No 248
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=84.08 E-value=3.2 Score=37.88 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCCCEEEcC--CC-CCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 285 IYCASMTAMFAGSDFIKTS--TG-KEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTS--TG-f~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
....++...++|+|+|--+ ++ +...+... +.++.+++.+ .+.|=+.|||+|.+++..++ .+|+
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~-------~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l-----~~Ga 102 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDT-------EMIRFVRPLT--TLPIIASGGAGKMEHFLEAF-----LRGA 102 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCH-------HHHHHHGGGC--CSCEEEESCCCSHHHHHHHH-----HTTC
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccH-------HHHHHHHHhC--CCCEEEeCCCCCHHHHHHHH-----HcCC
Confidence 3456677788999999632 11 11234444 3455555443 56778899999999999999 5888
Q ss_pred C
Q psy10250 362 D 362 (387)
Q Consensus 362 ~ 362 (387)
+
T Consensus 103 d 103 (247)
T 3tdn_A 103 D 103 (247)
T ss_dssp S
T ss_pred C
Confidence 4
No 249
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=84.08 E-value=20 Score=32.32 Aligned_cols=116 Identities=5% Similarity=-0.003 Sum_probs=70.6
Q ss_pred CCCeEEEEEC---CccHHHHHHHhhhcCCCCCceEEEEecCCCCCCC----------C------HHHHHHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVY---PARVVDVIKVLDRENARDDVKVASVAAGFPSGQY----------L------LETRLHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~----------~------~e~K~~Ea~~Ai~~GA 233 (387)
++||.+|=+. +.-++..++.++. .++++.++ .+|.+.. + .+.=..-++.|.+.|+
T Consensus 34 ~~G~~~vEl~~~~~~~~~~~~~~l~~----~gl~~~~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa 107 (269)
T 3ngf_A 34 EAGFGGVEFLFPYDFDADVIARELKQ----HNLTQVLF--NMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDC 107 (269)
T ss_dssp HTTCSEEECSCCTTSCHHHHHHHHHH----TTCEEEEE--ECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HcCCCEEEecCCccCCHHHHHHHHHH----cCCcEEEE--ecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCC
Confidence 4577777664 3457777888875 68998776 4554321 1 1112234667778899
Q ss_pred CeeeeecCchhhhcC-----ChhHHHHHHHHHHHHhCCCcceEEEEee--------ccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 234 DEVDIVIQRSLVLNN-----QWPELFSEVKQMKEKCGEKIHMKTILAV--------GELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 234 dEID~Vin~~~lk~g-----~~~~v~~Ei~~v~~~~~~~~~lKvIlEt--------~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
+-| |+..| .-.+ .|+.+.+-++++.+.+.. .-+++-+|+ ..+.+.++ +.++..+.|.+.+
T Consensus 108 ~~v--~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~n~~~~~~~~~~~~~~---~~~l~~~v~~~~v 180 (269)
T 3ngf_A 108 RTL--HAMSG-ITEGLDRKACEETFIENFRYAADKLAP-HGITVLVEPLNTRNMPGYFIVHQLE---AVGLVKRVNRPNV 180 (269)
T ss_dssp CEE--ECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGG-GTCEEEECCCCTTTSTTBSCCCHHH---HHHHHHHHCCTTE
T ss_pred CEE--EEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEeeCCcccCccchhcCHHH---HHHHHHHhCCCCC
Confidence 875 44444 2222 356666777777777754 458999996 34555554 4455666676655
Q ss_pred E
Q psy10250 301 K 301 (387)
Q Consensus 301 K 301 (387)
+
T Consensus 181 g 181 (269)
T 3ngf_A 181 A 181 (269)
T ss_dssp E
T ss_pred C
Confidence 5
No 250
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=84.00 E-value=25 Score=32.26 Aligned_cols=191 Identities=13% Similarity=0.090 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEE-EEECCccHHHHHHHhhhcCCCCCceEEE--EecCCCCCCCCHHH
Q psy10250 144 TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAA-VCVYPARVVDVIKVLDRENARDDVKVAS--VAAGFPSGQYLLET 220 (387)
Q Consensus 144 T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~a-VcV~P~~v~~a~~~L~~~~~~~~v~v~t--VvigFP~G~~~~e~ 220 (387)
|.++..++++.... . ....++.- +|-+..++..+++.+ +++|.+ + --+..|..|=|+
T Consensus 20 ~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~L~~v~~~~-------~i~v~aQdv-~~~~~Ga~TGei 79 (225)
T 1hg3_A 20 TGKRALEIAKAAEK---------V---YKETGVTIVVAPQLVDLRMIAESV-------EIPVFAQHI-DPIKPGSHTGHV 79 (225)
T ss_dssp SHHHHHHHHHHHHH---------H---HHTTCCEEEEECCHHHHHHHHHSC-------SSCBEESCC-CSCCSBSCTTCC
T ss_pred CHHHHHHHHHHHHh---------h---ccccCCcEEEeCCHHHHHHHHHhc-------CCceeeeeC-CcccCCCccCcc
Confidence 45777777776641 0 00234433 333333666666543 122222 2 134456665555
Q ss_pred HHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE
Q psy10250 221 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
-. .++.+.||+-+=+--.-..+ ...|+.+..+.+.. .-+++|+|.+.- ++... +...+++.|
T Consensus 80 s~---~~l~~~Ga~~VllghseRR~-------~~~e~~~k~~~A~~-~GL~~ivcVge~---~e~~~----~~~~~~~iI 141 (225)
T 1hg3_A 80 LP---EAVKEAGAVGTLLNHSENRM-------ILADLEAAIRRAEE-VGLMTMVCSNNP---AVSAA----VAALNPDYV 141 (225)
T ss_dssp CH---HHHHHTTCCEEEESCGGGCC-------BHHHHHHHHHHHHH-HTCEEEEEESSH---HHHHH----HHTTCCSEE
T ss_pred cH---HHHHHcCCCEEEECcchhcC-------CHHHHHHHHHHHHH-CCCEEEEEeCCH---HHHHH----HhcCCCCEE
Confidence 44 45567898875433222111 22356666666654 459999999975 23322 344566655
Q ss_pred E------cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeecc
Q psy10250 301 K------TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGAS 374 (387)
Q Consensus 301 K------TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtS 374 (387)
= ..||-.-..+|++++..+.+.+|.+ ...+.|=.-|||++.++...+. ..|.| .+-||.+
T Consensus 142 ayep~waiGtG~~v~t~~~d~~~~~~~~ir~~----~~~~~ilyggsV~~~n~~~~~~-----~~~vD-----G~LVG~a 207 (225)
T 1hg3_A 142 AVEPPELIGTGIPVSKAKPEVITNTVELVKKV----NPEVKVLCGAGISTGEDVKKAI-----ELGTV-----GVLLASG 207 (225)
T ss_dssp EECCTTTTTTSCCTTTSCTHHHHHHHHHHHHH----CTTSEEEEESSCCSHHHHHHHH-----HTTCS-----EEEESHH
T ss_pred EEeChhhhccCCCCCCCChhHHHHHHHHHHhc----cCCCEEEEeCCCCcHHHHHHHH-----hCCCC-----EEEeCHH
Confidence 3 1333111246777666665555443 4566666677999999999888 46764 6889987
Q ss_pred c-----hHHHHHHHHhh
Q psy10250 375 S-----LLNNILQELEA 386 (387)
Q Consensus 375 s-----~~~il~~~~~~ 386 (387)
+ ..+++.+-+++
T Consensus 208 ~l~a~~~~~~i~~l~~~ 224 (225)
T 1hg3_A 208 VTKAKDPEKAIWDLVSG 224 (225)
T ss_dssp HHTCSSHHHHHHHHHHT
T ss_pred HHCCcCHHHHHHHHHhh
Confidence 5 45555555544
No 251
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=83.62 E-value=2.8 Score=38.02 Aligned_cols=134 Identities=15% Similarity=0.059 Sum_probs=70.5
Q ss_pred cHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHh
Q psy10250 185 RVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC 264 (387)
Q Consensus 185 ~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~ 264 (387)
....+++.. . .++++... .|+ .+. ..++.+++.|||-+ ++....+.+- + .+.++ +..
T Consensus 62 ~~~~i~~i~-~----~~ipvi~~-Ggi----~~~----~~~~~~~~~Gad~V--~lg~~~l~~p--~----~~~~~-~~~ 118 (241)
T 1qo2_A 62 NLPVLEKLS-E----FAEHIQIG-GGI----RSL----DYAEKLRKLGYRRQ--IVSSKVLEDP--S----FLKSL-REI 118 (241)
T ss_dssp THHHHHHGG-G----GGGGEEEE-SSC----CSH----HHHHHHHHTTCCEE--EECHHHHHCT--T----HHHHH-HTT
T ss_pred hHHHHHHHH-h----cCCcEEEE-CCC----CCH----HHHHHHHHCCCCEE--EECchHhhCh--H----HHHHH-HHc
Confidence 345555433 2 35676555 233 332 26777888998864 4455544432 2 24444 434
Q ss_pred CCCcc--eEE---EEeeccCC-----ChHHHHHHHHHHHHcCCCEE-EcCCCCC--CCCCChhhhHhHHHHHHHHHHHcC
Q psy10250 265 GEKIH--MKT---ILAVGELK-----TSENIYCASMTAMFAGSDFI-KTSTGKE--KTNATIPAGIIMCSAIKHFHKLSG 331 (387)
Q Consensus 265 ~~~~~--lKv---IlEt~~L~-----t~e~i~~a~~ia~~aGaDfV-KTSTGf~--~~gat~~~~~~m~~~v~~~~~~~~ 331 (387)
++... +.+ .+++.-.. +.. ..++.+.+.|+++| =|+++.. ..|..+ +.++.+++.+
T Consensus 119 g~~i~~~~d~~~~~v~~~g~~~~~~~~~~---e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~-------~~i~~l~~~~- 187 (241)
T 1qo2_A 119 DVEPVFSLDTRGGRVAFKGWLAEEEIDPV---SLLKRLKEYGLEEIVHTEIEKDGTLQEHDF-------SLTKKIAIEA- 187 (241)
T ss_dssp TCEEEEEEEEETTEECCTTCSSCSCCCHH---HHHHHHHTTTCCEEEEEETTHHHHTCCCCH-------HHHHHHHHHH-
T ss_pred CCcEEEEEEecCCEEEECCceecCCCCHH---HHHHHHHhCCCCEEEEEeecccccCCcCCH-------HHHHHHHHhc-
Confidence 42111 111 22221110 222 23455677999954 3443221 123334 3455555554
Q ss_pred CCceEeEeccCCCHHHHHHHHH
Q psy10250 332 KKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 332 ~~~gIKasGGIrt~~~a~~~i~ 353 (387)
++.|=++|||++.+++..++.
T Consensus 188 -~iPvia~GGI~~~~d~~~~~~ 208 (241)
T 1qo2_A 188 -EVKVLAAGGISSENSLKTAQK 208 (241)
T ss_dssp -TCEEEEESSCCSHHHHHHHHH
T ss_pred -CCcEEEECCCCCHHHHHHHHh
Confidence 577889999999999999994
No 252
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=83.44 E-value=8.5 Score=35.63 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEEc-CCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 281 TSENIYCASMTAMFAGSDFIKT-STGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKT-STGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
+.+++..-++.+..-|-+||=+ ++|- .+ .+ +-|+.+++.++ .+.|=+-|||||.+||.+++ .
T Consensus 138 ~~e~~~~~a~~a~~~g~~~VYld~sG~--~~-~~-------~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~------~ 200 (228)
T 3vzx_A 138 NMDDIVAYARVSELLQLPIFYLEYSGV--LG-DI-------EAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA------E 200 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECTTS--CC-CH-------HHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH------T
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCC--cC-CH-------HHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH------h
Confidence 3466666666677778888866 3442 22 23 35566666542 56788889999999999987 5
Q ss_pred CCC
Q psy10250 360 GPD 362 (387)
Q Consensus 360 Ga~ 362 (387)
|++
T Consensus 201 gAD 203 (228)
T 3vzx_A 201 HAD 203 (228)
T ss_dssp TCS
T ss_pred CCC
Confidence 884
No 253
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=83.42 E-value=3.6 Score=39.54 Aligned_cols=122 Identities=24% Similarity=0.255 Sum_probs=66.5
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..+++.+.+.|||-|| ....+. ...+ +..+.+.- .-+.++.+..-+ ++..+ +.++|+|+|-
T Consensus 90 ide~qil~aaGAD~Id----~s~~~~--~~~l---i~~i~~~~---~g~~vvv~v~~~---~Ea~~----a~~~Gad~I~ 150 (297)
T 4adt_A 90 FVEAQILEELKVDMLD----ESEVLT--MADE---YNHINKHK---FKTPFVCGCTNL---GEALR----RISEGASMIR 150 (297)
T ss_dssp HHHHHHHHHTTCSEEE----EETTSC--CSCS---SCCCCGGG---CSSCEEEEESSH---HHHHH----HHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEE----cCCCCC--HHHH---HHHHHhcC---CCCeEEEEeCCH---HHHHH----HHhCCCCEEE
Confidence 6777778889999984 222211 1111 11111111 135677776533 44433 4578999998
Q ss_pred cCCCCCCCCC---Chhhh-------------------------HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 302 TSTGKEKTNA---TIPAG-------------------------IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 302 TSTGf~~~ga---t~~~~-------------------------~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
|. |.++.|- .+++. ..-++-++.+++..+-.+-+=+.|||+|.+++..++
T Consensus 151 v~-g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~- 228 (297)
T 4adt_A 151 TK-GEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCM- 228 (297)
T ss_dssp EC-CCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHH-
T ss_pred EC-CCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHH-
Confidence 87 5432221 00000 001133445555443333222899999999999999
Q ss_pred HHHHhcCCCccCCCcceeec
Q psy10250 354 LVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 354 l~~~~~Ga~w~~~~~~RIGt 373 (387)
.+|++ ..-+|+
T Consensus 229 ----~~GAd-----gVlVGs 239 (297)
T 4adt_A 229 ----QLGMD-----GVFVGS 239 (297)
T ss_dssp ----HTTCS-----CEEESH
T ss_pred ----HcCCC-----EEEEhH
Confidence 58985 466675
No 254
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=83.40 E-value=5.6 Score=36.09 Aligned_cols=159 Identities=15% Similarity=0.147 Sum_probs=84.3
Q ss_pred EEEECCccHHHHHHHhhhcCCCCCceEEE-EecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHH
Q psy10250 178 AVCVYPARVVDVIKVLDRENARDDVKVAS-VAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSE 256 (387)
Q Consensus 178 aVcV~P~~v~~a~~~L~~~~~~~~v~v~t-VvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~E 256 (387)
.+|-+..++..+++.+ +++|.+ =+--+..|..+=+.= ++.+.+.|||-+=+. .-.. ....+|
T Consensus 37 ~~~~~~~~l~~v~~~~-------~~~v~aqd~~~~~~ga~tGei~---~~~~~~~Gad~Vll~-~ser------~l~~~e 99 (219)
T 2h6r_A 37 GVAPQFVDLRMIVENV-------NIPVYAQHIDNINPGSHTGHIL---AEAIKDCGCKGTLIN-HSEK------RMLLAD 99 (219)
T ss_dssp EEECCTTTHHHHHHHC-------CSCBEESCCCSCCSBSCTTCCC---HHHHHHHTCCEEEES-BTTB------CCBHHH
T ss_pred EEECCHHHHHHHHHHc-------CCcEEEEECChhhcCCccCchH---HHHHHHcCCCEEEEC-Cccc------cCCHHH
Confidence 3555555888877654 244433 100122333321111 377788899886552 1100 011234
Q ss_pred HHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCC-CC-----CCChhhhHhHHHHHHHHHHHc
Q psy10250 257 VKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKE-KT-----NATIPAGIIMCSAIKHFHKLS 330 (387)
Q Consensus 257 i~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~-~~-----gat~~~~~~m~~~v~~~~~~~ 330 (387)
+.+..+.+.. .-+++|++.+.. ++..++ .+.|++||=--.-|. .. .++++++..+.+.+|. .
T Consensus 100 ~~~~~~~a~~-~Gl~~iv~v~~~---~e~~~~----~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~---~- 167 (219)
T 2h6r_A 100 IEAVINKCKN-LGLETIVCTNNI---NTSKAV----AALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKE---I- 167 (219)
T ss_dssp HHHHHHHHHH-HTCEEEEEESSS---HHHHHH----TTTCCSEEEECCCC--------------CSHHHHHHHHH---H-
T ss_pred HHHHHHHHHH-CCCeEEEEeCCc---hHHHHH----HhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHh---c-
Confidence 5556555543 358999999865 223332 345888874333331 01 2334433434333333 2
Q ss_pred CCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccc
Q psy10250 331 GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 375 (387)
Q Consensus 331 ~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs 375 (387)
...+.|=+-|||++.+++..+. ..|+| ..-+|.+.
T Consensus 168 ~~~~~ii~ggGI~~~~~~~~~~-----~~gaD-----gvlVGsAi 202 (219)
T 2h6r_A 168 NKDVKVLCGAGISKGEDVKAAL-----DLGAE-----GVLLASGV 202 (219)
T ss_dssp CTTCEEEECSSCCSHHHHHHHH-----TTTCC-----CEEESHHH
T ss_pred cCCCeEEEEeCcCcHHHHHHHh-----hCCCC-----EEEEcHHH
Confidence 3467777789999999999988 57874 57788653
No 255
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=83.37 E-value=20 Score=35.03 Aligned_cols=147 Identities=12% Similarity=-0.028 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecC----chhh-hc--------CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQ----RSLV-LN--------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin----~~~l-k~--------g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
+.+.-..+++.+.+.|.+-+.+=+- .|.. .+ .+.+...+=+++|++++++ -+.+.+...---+.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~--d~~l~vDan~~~~~~ 223 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGP--DVDIIVENHGHTDLV 223 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHH
Confidence 6677788899999999999885431 1210 00 0123344556777887865 356667764332667
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
+..+.++...+.|.+||--+..- ... +..+.+++.+ ++.|=+-+.+.|.+++..++. .-.++.
T Consensus 224 ~ai~~~~~l~~~~i~~iE~P~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~ 286 (403)
T 2ox4_A 224 SAIQFAKAIEEFNIFFYEEINTP----LNP-------RLLKEAKKKI--DIPLASGERIYSRWGFLPFLE----DRSIDV 286 (403)
T ss_dssp HHHHHHHHHGGGCEEEEECCSCT----TST-------HHHHHHHHTC--CSCEEECTTCCHHHHHHHHHH----TTCCSE
T ss_pred HHHHHHHHHHhhCCCEEeCCCCh----hhH-------HHHHHHHHhC--CCCEEecCCcCCHHHHHHHHH----cCCCCE
Confidence 77777888888899999865321 122 3445555543 466666677899999999995 334788
Q ss_pred cCCCcceeec-cchHHHHHH
Q psy10250 364 LNKDLFRIGA-SSLLNNILQ 382 (387)
Q Consensus 364 ~~~~~~RIGt-Ss~~~il~~ 382 (387)
+.++..++|. +.++++..-
T Consensus 287 v~ik~~~~GGite~~~i~~~ 306 (403)
T 2ox4_A 287 IQPDLGTCGGFTEFKKIADM 306 (403)
T ss_dssp ECCCHHHHTHHHHHHHHHHH
T ss_pred EecCccccCCHHHHHHHHHH
Confidence 8888999865 555555543
No 256
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=83.15 E-value=32 Score=32.61 Aligned_cols=82 Identities=9% Similarity=0.037 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC---CcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE---KIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~---~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
..+.-+..+++.+++|||=||+-.--..=- -..-...+|++++...+.. ..-+.+-|.|. ..+ ..+.|.
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPg-a~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~---~~~----va~aAl 107 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPG-AAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS---KPE----VIRESA 107 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTT-CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC---CHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC---CHH----HHHHHH
Confidence 367777889999999999999976221000 0222345666666555431 01244555553 223 345577
Q ss_pred HcCCCEEEcCCCC
Q psy10250 294 FAGSDFIKTSTGK 306 (387)
Q Consensus 294 ~aGaDfVKTSTGf 306 (387)
++|+|.|.--+|+
T Consensus 108 ~aGa~iINdvsg~ 120 (282)
T 1aj0_A 108 KVGAHIINDIRSL 120 (282)
T ss_dssp HTTCCEEEETTTT
T ss_pred HcCCCEEEECCCC
Confidence 7899999988885
No 257
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=83.14 E-value=30 Score=33.95 Aligned_cols=159 Identities=13% Similarity=0.050 Sum_probs=101.4
Q ss_pred CCceEEEEecCCCCCCCC-HH----HHHHHHHHHHHCCCCeeee-ecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE
Q psy10250 200 DDVKVASVAAGFPSGQYL-LE----TRLHEIELLAKQKVDEVDI-VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI 273 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~-~e----~K~~Ea~~Ai~~GAdEID~-Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI 273 (387)
..+++-+. +++-.|... .+ .-..+++.+++.|.+-+=+ -+... ..+.+.-.+=+++|++++++. +.+.
T Consensus 131 ~~v~~y~s-~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~---~~~~~~d~~~v~avR~a~G~d--~~l~ 204 (394)
T 3mqt_A 131 AQLTPYFT-LYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPND---KVSDKEIVAYLRELREVIGWD--MDMM 204 (394)
T ss_dssp SSBCCEEE-CCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT---TSCHHHHHHHHHHHHHHHCSS--SEEE
T ss_pred CeEEEEEE-ecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCC---ccCHHHHHHHHHHHHHHhCCC--CeEE
Confidence 35666555 342133332 23 3345788899999998876 33211 024555566678888888753 5666
Q ss_pred EeeccCC-ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 274 LAVGELK-TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 274 lEt~~L~-t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
+....=- +.++-.+.++...+.|.+||--+..- ..+ +..+.+++.+ .+.|=+-+.+.+..++..++
T Consensus 205 vDan~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~----~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l 271 (394)
T 3mqt_A 205 VDCLYRWTDWQKARWTFRQLEDIDLYFIEACLQH----DDL-------IGHQKLAAAI--NTRLCGAEMSTTRFEAQEWL 271 (394)
T ss_dssp EECTTCCSCHHHHHHHHHHTGGGCCSEEESCSCT----TCH-------HHHHHHHHHS--SSEEEECTTCCHHHHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHHhhcCCeEEECCCCc----ccH-------HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHH
Confidence 7754322 55666677787888999999865421 122 3455555553 46777777899999999999
Q ss_pred HHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 353 YLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 353 ~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
. .-.++.++++..|+|. +.++++..
T Consensus 272 ~----~~~~d~v~~k~~~~GGit~~~~ia~ 297 (394)
T 3mqt_A 272 E----KTGISVVQSDYNRCGGVTELLRIMD 297 (394)
T ss_dssp H----HHCCSEECCCTTTSSCHHHHHHHHH
T ss_pred H----cCCCCeEecCccccCCHHHHHHHHH
Confidence 5 3357888999999965 55555544
No 258
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=83.10 E-value=24 Score=34.85 Aligned_cols=146 Identities=7% Similarity=0.005 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecC-----------chhh--hcCC-------hhHHHHHHHHHHHHhCCCcceEE
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQ-----------RSLV--LNNQ-------WPELFSEVKQMKEKCGEKIHMKT 272 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin-----------~~~l--k~g~-------~~~v~~Ei~~v~~~~~~~~~lKv 272 (387)
.+..+.+.-..+++.+++.|.+-+=+=+. .|.- ...+ .+...+-+++|++++++. +.+
T Consensus 139 ~~~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d--~~l 216 (409)
T 3go2_A 139 PPVTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPD--VEI 216 (409)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTT--SEE
T ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCC--CEE
Confidence 35567888888999999999998876440 0110 0011 123445677888888753 456
Q ss_pred EEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 273 ILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 273 IlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
++....=-+.++-.+.++...+.|.+||--+. ..+ +..+.+++.+ .+.|=+-+.+.+..++..++
T Consensus 217 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P~------~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 281 (409)
T 3go2_A 217 LLDLNFNAKPEGYLKILRELADFDLFWVEIDS------YSP-------QGLAYVRNHS--PHPISSCETLFGIREFKPFF 281 (409)
T ss_dssp EEECTTCSCHHHHHHHHHHTTTSCCSEEECCC------SCH-------HHHHHHHHTC--SSCEEECTTCCHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHhhcCCeEEEeCc------CCH-------HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHH
Confidence 66654322667767777777888999999543 123 3445555543 46677777899999999999
Q ss_pred HHHHHhcC-CCccCCCcceeec-cchHHHHH
Q psy10250 353 YLVLIMLG-PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 353 ~l~~~~~G-a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
. .| ++.++++..| |. +.++++..
T Consensus 282 ~-----~~~~d~v~~k~~~-GGit~~~~ia~ 306 (409)
T 3go2_A 282 D-----ANAVDVAIVDTIW-NGVWQSMKIAA 306 (409)
T ss_dssp H-----TTCCSEEEECHHH-HCHHHHHHHHH
T ss_pred H-----hCCCCEEEeCCCC-CCHHHHHHHHH
Confidence 4 55 6777777777 64 44555443
No 259
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=83.07 E-value=14 Score=44.29 Aligned_cols=114 Identities=15% Similarity=0.079 Sum_probs=59.4
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE-
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK- 301 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK- 301 (387)
...+.+++.|++=..+++.. |... .+|+.+..+..+ +++|.=.+ +..+-.+++....++|+|+|-
T Consensus 657 ~~~~~~~~~gv~i~gv~~~~-----G~p~--~e~~~~~l~~~g----i~~i~~v~---~~~~a~~~v~~l~~aG~D~iV~ 722 (2060)
T 2uva_G 657 PLLGRLRADGVPIEGLTIGA-----GVPS--IEVANEYIQTLG----IRHISFKP---GSVDAIQQVINIAKANPTFPII 722 (2060)
T ss_dssp HHHHHHHTTTCCEEEEEEES-----SCCC--HHHHHHHHHHSC----CSEEEECC---CSHHHHHHHHHHHHHCTTSCEE
T ss_pred HHHHHHHHcCCCcceEeecC-----CCCC--HHHHHHHHHHcC----CeEEEecC---CHHHHHHHHHHHHHcCCCEEEE
Confidence 44667777888652222222 3221 223333333333 33442122 323344454556689999986
Q ss_pred -cCCCCCCCCC-Chhhh-HhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 302 -TSTGKEKTNA-TIPAG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 302 -TSTGf~~~ga-t~~~~-~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
..+|...+|- ..++. .-.+.-+..+++.. ++-|=++|||.|.+++.+++
T Consensus 723 ~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~--~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 723 LQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS--NIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp EEECCTTSSSSCCSCCSHHHHHHHHHHHHTST--TEEEEEESSCCSHHHHHHHH
T ss_pred eeeEcccCCCCCCcccccchHHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHh
Confidence 2445433221 11110 11123444444433 48889999999999999999
No 260
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=82.98 E-value=7.4 Score=35.21 Aligned_cols=126 Identities=10% Similarity=0.058 Sum_probs=69.6
Q ss_pred HHHHHHCCCCeeeeec-CchhhhcCChhHHHHHHHHHHHHhCCCcceE---EEEeeccC---CC-h--------HHHHHH
Q psy10250 225 IELLAKQKVDEVDIVI-QRSLVLNNQWPELFSEVKQMKEKCGEKIHMK---TILAVGEL---KT-S--------ENIYCA 288 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vi-n~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lK---vIlEt~~L---~t-~--------e~i~~a 288 (387)
.+.+.+.|.+-|++.. +...+.....+ ..+++++++.+.. .-++ +.+..++. .+ + +.+.++
T Consensus 18 l~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~ 94 (285)
T 1qtw_A 18 AIRAAEIDATAFALFTKNQRQWRAAPLT--TQTIDEFKAACEK-YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE 94 (285)
T ss_dssp HHHHHHTTCSEEECCSSCSSCSSCCCCC--HHHHHHHHHHHHH-TTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeeCCCCCcCcCCCCC--HHHHHHHHHHHHH-cCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHH
Confidence 5667788999999842 22112211121 2345555554432 1244 33333322 11 2 235567
Q ss_pred HHHHHHcCCCEEEcCCCCCCCCCChh-hhHhHHHHHHHHHHH-cCCCceEeEecc-----CCCHHHHHHHHH
Q psy10250 289 SMTAMFAGSDFIKTSTGKEKTNATIP-AGIIMCSAIKHFHKL-SGKKIGLKPAGG-----ISTFEDSVRWIY 353 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf~~~gat~~-~~~~m~~~v~~~~~~-~~~~~gIKasGG-----Irt~~~a~~~i~ 353 (387)
.++|.+.|+.+|...+|+.....+.+ ....+++.++.+... .|-++.+-.-.| +.|.+++..+++
T Consensus 95 i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 166 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIID 166 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHH
Confidence 88899999999999888754432333 333444555554332 234555555433 368999999996
No 261
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=82.97 E-value=31 Score=33.95 Aligned_cols=190 Identities=9% Similarity=-0.005 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-CCccHH----HHHHHhhhcCCCCCceEEEEecCCCCCCC
Q psy10250 142 DDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-YPARVV----DVIKVLDRENARDDVKVASVAAGFPSGQY 216 (387)
Q Consensus 142 ~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-~P~~v~----~a~~~L~~~~~~~~v~v~tVvigFP~G~~ 216 (387)
..+.++-.++++.-. +.|+..+=+ +|.+.+ .+++..+. ..++++++.+ | +
T Consensus 30 ~~~~~~Kl~ia~~L~----------------~~Gv~~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l~---r-~-- 84 (370)
T 3rmj_A 30 AMTKEEKIRVARQLE----------------KLGVDIIEAGFAAASPGDFEAVNAIAKT---ITKSTVCSLS---R-A-- 84 (370)
T ss_dssp CCCHHHHHHHHHHHH----------------HHTCSEEEEEEGGGCHHHHHHHHHHHTT---CSSSEEEEEE---E-S--
T ss_pred CcCHHHHHHHHHHHH----------------HcCCCEEEEeCCCCCHHHHHHHHHHHHh---CCCCeEEEEe---c-C--
Confidence 456666666665544 335554444 244333 33333332 2467777663 1 1
Q ss_pred CHHHHHHHHHHHHH----CCCCeeeeecCchhh-----hcCChhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHHH
Q psy10250 217 LLETRLHEIELLAK----QKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIY 286 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~----~GAdEID~Vin~~~l-----k~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i~ 286 (387)
....++.|++ .|+++|.+++..+.+ .....+++.+.+..+++.+.. +..+-+=.|...-.+++...
T Consensus 85 ----~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~ 160 (370)
T 3rmj_A 85 ----IERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLA 160 (370)
T ss_dssp ----SHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHH
T ss_pred ----CHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHH
Confidence 1334455555 799999999876654 244678888898888888765 22333445545555778888
Q ss_pred HHHHHHHHcCCCEEE--cCCCCCCCCCChhhhHhHHHHHHHHHHHcCC----CceEeEeccCCCH--HHHHHHHHHHHHh
Q psy10250 287 CASMTAMFAGSDFIK--TSTGKEKTNATIPAGIIMCSAIKHFHKLSGK----KIGLKPAGGISTF--EDSVRWIYLVLIM 358 (387)
Q Consensus 287 ~a~~ia~~aGaDfVK--TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~----~~gIKasGGIrt~--~~a~~~i~l~~~~ 358 (387)
+.++.+.++|+|-|- -..|. ++|..+..+++. +++.+++ .+++..= .|+ ..|-.+..+ +
T Consensus 161 ~~~~~~~~~Ga~~i~l~DT~G~----~~P~~~~~lv~~---l~~~~~~~~~~~l~~H~H---nd~GlAvAN~laAv---~ 227 (370)
T 3rmj_A 161 EICGAVIEAGATTINIPDTVGY----SIPYKTEEFFRE---LIAKTPNGGKVVWSAHCH---NDLGLAVANSLAAL---K 227 (370)
T ss_dssp HHHHHHHHHTCCEEEEECSSSC----CCHHHHHHHHHH---HHHHSTTGGGSEEEEECB---CTTSCHHHHHHHHH---H
T ss_pred HHHHHHHHcCCCEEEecCccCC----cCHHHHHHHHHH---HHHhCCCcCceEEEEEeC---CCCChHHHHHHHHH---H
Confidence 999999999999654 45554 678877666544 4555654 2333331 121 122222211 5
Q ss_pred cCCCccCCCcceeec
Q psy10250 359 LGPDWLNKDLFRIGA 373 (387)
Q Consensus 359 ~Ga~w~~~~~~RIGt 373 (387)
+|+++++....=||-
T Consensus 228 aGa~~vd~tv~GlGe 242 (370)
T 3rmj_A 228 GGARQVECTVNGLGE 242 (370)
T ss_dssp TTCCEEEEBGGGCSS
T ss_pred hCCCEEEEeccccCc
Confidence 899776655555554
No 262
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=82.91 E-value=22 Score=38.28 Aligned_cols=196 Identities=13% Similarity=0.101 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHc--CCCeeeee----cc--hhHHhcCChhHHHHHHHHHHHHcccCccEEEEEec----cCCC-CH
Q psy10250 7 YLLETRLHEIELLAKQ--KVDEVDIV----IQ--RSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAV----GELK-TS 73 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~--GA~EiD~V----in--~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt----~~L~-~~ 73 (387)
.+++-|+.=++...+. |.++|++- ++ +.++.+.+|+.++ ++.+..++ ..+.+.+=. ||-. .+
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~----~l~~~~~~-~~l~~l~R~~n~vgy~~~p~ 196 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQ----ELRELIPN-IPFQMLLRGANAVGYTNYPD 196 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHH----HHHHHCSS-SCEEEEECGGGTTSSSCCCH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHH----HHHHHccc-chHHHHhcccccccccccCC
Confidence 5788999999988888 46668874 22 4456667777654 45555543 456665532 2211 23
Q ss_pred HHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcc----cccc--cCCCC---CC
Q psy10250 74 ENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEF----IDLT--TLSGD---DT 144 (387)
Q Consensus 74 e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----ID~T--~L~~~---~T 144 (387)
.-+..-.+.|.++|+|.+...+.. . + +..++.-..++++.-.. +.+| ...|. .+
T Consensus 197 ~~~~~~i~~a~~~Gvd~irIf~s~-------n----~------l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~ 259 (718)
T 3bg3_A 197 NVVFKFCEVAKENGMDVFRVFDSL-------N----Y------LPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYS 259 (718)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSS-------C----C------HHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTC
T ss_pred cchHHHHHHHHhcCcCEEEEEecH-------H----H------HHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCC
Confidence 334555677888999998876421 1 1 11223333344443322 4455 24543 37
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC-------CccHHHHHHHhhhcCCCC-CceEEEEecCCCCCCC
Q psy10250 145 EAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY-------PARVVDVIKVLDRENARD-DVKVASVAAGFPSGQY 216 (387)
Q Consensus 145 ~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~-------P~~v~~a~~~L~~~~~~~-~v~v~tVvigFP~G~~ 216 (387)
.+.+.++++++. ++|...||+. |..+....+.|+.. . ++.+ +| |..+
T Consensus 260 ~e~~~~~a~~l~----------------~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~---~p~~~I-----~~-H~Hn 314 (718)
T 3bg3_A 260 LQYYMGLAEELV----------------RAGTHILCIKDMAGLLKPTACTMLVSSLRDR---FPDLPL-----HI-HTHD 314 (718)
T ss_dssp HHHHHHHHHHHH----------------HHTCSEEEEECTTSCCCHHHHHHHHHHHHHH---STTCCE-----EE-ECCC
T ss_pred HHHHHHHHHHHH----------------HcCCCEEEEcCcCCCcCHHHHHHHHHHHHHh---CCCCeE-----EE-EECC
Confidence 888999998888 5688888875 76666656666542 1 2322 44 4555
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecC-chhhhcCCh
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQ-RSLVLNNQW 250 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin-~~~lk~g~~ 250 (387)
+...=++-+..|++.||+-||.-+| +|. ..||-
T Consensus 315 d~GlAvANslaAveAGa~~VD~ti~GlGe-rtGN~ 348 (718)
T 3bg3_A 315 TSGAGVAAMLACAQAGADVVDVAADSMSG-MTSQP 348 (718)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEEBCGGGCS-TTSCC
T ss_pred CccHHHHHHHHHHHhCCCEEEecCccccc-ccCch
Confidence 5666677888999999999999998 443 45655
No 263
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=82.76 E-value=38 Score=33.20 Aligned_cols=231 Identities=12% Similarity=0.011 Sum_probs=121.4
Q ss_pred cEEEEEeccC--CCCHHHHHHHHHHHHHcCCCEEecCCCCCCCC-CCCcccccchhc------cccchhhhhhHHHHHHh
Q psy10250 60 HMKTILAVGE--LKTSENIYYASMTAMFAGSDFIKTSTGKEKTN-ATIPADLTRQFE------AVDLSRLKNKKSLLLKI 130 (387)
Q Consensus 60 ~~KvIlEt~~--L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~g-at~~~~~~~~~~------~~~~~~~~~~~~~~~~l 130 (387)
++-+|-|.|- --+.+...+..+.|.++|||.||-.| |-+.. .++ +.-.+|.. |=.++.++--.+|.+.|
T Consensus 19 ~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~-~k~~tl~s~-~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L 96 (349)
T 2wqp_A 19 EPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQT-HIVEDEMSD-EAKQVIPGNADVSIYEIMERCALNEEDEIKL 96 (349)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEE-CCHHHHCCG-GGGGCCCTTCSSCHHHHHHHHCCCHHHHHHH
T ss_pred ceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeee-cccccccCc-chhccccCCCCccHHHHHHHhCCCHHHHHHH
Confidence 5789999985 44667888889999999999999553 21110 011 01111110 00011111112233333
Q ss_pred hc---ccccccCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC---CccHHHHHHHhhhcCCCCCceE
Q psy10250 131 IE---FIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY---PARVVDVIKVLDRENARDDVKV 204 (387)
Q Consensus 131 ~~---~ID~T~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v 204 (387)
.. -.....+..-.+.++++-+.+- ++..+=|. -+..++.++.-+ ++-+|
T Consensus 97 ~~~~~~~Gi~~~st~~d~~svd~l~~~--------------------~v~~~KI~S~~~~n~~LL~~va~-----~gkPv 151 (349)
T 2wqp_A 97 KEYVESKGMIFISTLFSRAAALRLQRM--------------------DIPAYKIGSGECNNYPLIKLVAS-----FGKPI 151 (349)
T ss_dssp HHHHHHTTCEEEEEECSHHHHHHHHHH--------------------TCSCEEECGGGTTCHHHHHHHHT-----TCSCE
T ss_pred HHHHHHhCCeEEEeeCCHHHHHHHHhc--------------------CCCEEEECcccccCHHHHHHHHh-----cCCeE
Confidence 33 3333334434444555443222 22223233 235566554432 23333
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecC--chhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCCh
Q psy10250 205 ASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQ--RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 282 (387)
Q Consensus 205 ~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin--~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~ 282 (387)
--- .|..+.+.-..-++...+.|. ++++= ++.+=.-..+.=.+-|..+++..++ +.|.+-...+ .
T Consensus 152 iLs-----tGmat~~Ei~~Ave~i~~~G~---~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~---lpVg~sdHt~-G- 218 (349)
T 2wqp_A 152 ILS-----TGMNSIESIKKSVEIIREAGV---PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPD---AIIGLSDHTL-D- 218 (349)
T ss_dssp EEE-----CTTCCHHHHHHHHHHHHHHTC---CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTT---SEEEEECCSS-S-
T ss_pred EEE-----CCCCCHHHHHHHHHHHHHcCC---CEEEEeccCCCCCChhhcCHHHHHHHHHHCCC---CCEEeCCCCC-c-
Confidence 222 355677777777777777788 55542 1111110111112446666666532 4567766665 2
Q ss_pred HHHHHHHHHHHHcCCCEEEcC-----CCCCC---CCCChhhhHhHHHHHHHHHHHcCCC
Q psy10250 283 ENIYCASMTAMFAGSDFIKTS-----TGKEK---TNATIPAGIIMCSAIKHFHKLSGKK 333 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTS-----TGf~~---~gat~~~~~~m~~~v~~~~~~~~~~ 333 (387)
..++..|...|||+|--= +..++ ...+|+....|++++|.+.+..|..
T Consensus 219 ---~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~~ 274 (349)
T 2wqp_A 219 ---NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGK 274 (349)
T ss_dssp ---SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSCC
T ss_pred ---HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCCC
Confidence 356788999999998631 22222 3467888899999999988887653
No 264
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=82.59 E-value=23 Score=32.19 Aligned_cols=137 Identities=12% Similarity=0.119 Sum_probs=81.8
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeecc-
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE- 278 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~- 278 (387)
..+++.-...|| ..+.+. .++.+.+.|.+-|++...- + ..++.++++.+.. .-+++. +-.++
T Consensus 25 ~mklg~~~~~~~--~~~~~~---~l~~~~~~G~~~vEl~~~~-------~---~~~~~~~~~~l~~-~gl~v~~~~~~~~ 88 (287)
T 3kws_A 25 ELKLSFQEGIAP--GESLNE---KLDFMEKLGVVGFEPGGGG-------L---AGRVNEIKQALNG-RNIKVSAICAGFK 88 (287)
T ss_dssp CCEEEEETTSSC--CSSHHH---HHHHHHHTTCCEEECBSTT-------C---GGGHHHHHHHHTT-SSCEECEEECCCC
T ss_pred eeeEEEEecccC--CCCHHH---HHHHHHHcCCCEEEecCCc-------h---HHHHHHHHHHHHH-cCCeEEEEecCCC
Confidence 456655423444 344443 4556667899999998762 1 2346666666654 235553 33321
Q ss_pred --CC--Ch-------HHHHHHHHHHHHcCCCEEEcCCCCCCCC----CChhhhHhHHHHHHHHH---HHcCCCceEeEec
Q psy10250 279 --LK--TS-------ENIYCASMTAMFAGSDFIKTSTGKEKTN----ATIPAGIIMCSAIKHFH---KLSGKKIGLKPAG 340 (387)
Q Consensus 279 --L~--t~-------e~i~~a~~ia~~aGaDfVKTSTGf~~~g----at~~~~~~m~~~v~~~~---~~~~~~~gIKasG 340 (387)
|. ++ +.+.++.+.|.+.|+++|...+|++... .+.+....+.+.++.+. +..|-++.+-.-.
T Consensus 89 ~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 168 (287)
T 3kws_A 89 GFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLN 168 (287)
T ss_dssp SCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 21 11 3456788899999999999988876432 23333333444444443 3345567777443
Q ss_pred -----cCCCHHHHHHHHH
Q psy10250 341 -----GISTFEDSVRWIY 353 (387)
Q Consensus 341 -----GIrt~~~a~~~i~ 353 (387)
-+.|.+++..++.
T Consensus 169 ~~~~~~~~~~~~~~~ll~ 186 (287)
T 3kws_A 169 RKECFYLRQVADAASLCR 186 (287)
T ss_dssp TTTCSSCCCHHHHHHHHH
T ss_pred cccCcccCCHHHHHHHHH
Confidence 2689999999996
No 265
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=82.57 E-value=38 Score=33.02 Aligned_cols=130 Identities=7% Similarity=-0.044 Sum_probs=85.3
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++-+. +++. ..+.+.-..+++.+++.|.+-+.+= ++. ++.+...+=+++|++++++ -+.+.+....--
T Consensus 132 ~vp~y~~-~~~~--~~~~~~~~~~a~~~~~~Gf~~vKik--~g~---~~~~~~~e~v~avR~a~G~--~~~l~vDan~~~ 201 (389)
T 2oz8_A 132 RVKAYAS-GLDF--HLDDDAFVSLFSHAASIGYSAFKIK--VGH---RDFDRDLRRLELLKTCVPA--GSKVMIDPNEAW 201 (389)
T ss_dssp EEEEEEE-CCBT--TCCHHHHHHHHHHHHHTTCCEEEEE--CCC---SSHHHHHHHHHHHHTTSCT--TCEEEEECTTCB
T ss_pred ceEEEEe-CCCc--CCCHHHHHHHHHHHHHhCCCEEEEc--cCC---CCHHHHHHHHHHHHHhhCC--CCeEEEECCCCC
Confidence 4555554 3443 3367777888999999999998853 331 3555666677888887764 356667654222
Q ss_pred ChHHHHHHHHHHHH--cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 281 TSENIYCASMTAMF--AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 281 t~e~i~~a~~ia~~--aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
+.++..+.++...+ .|.+||--..- +++ .+..+.+++.++ ++.|=+-+.+ +.+++..++.
T Consensus 202 ~~~~a~~~~~~l~~~g~~i~~iEqP~~-------~~~----~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~i~ 263 (389)
T 2oz8_A 202 TSKEALTKLVAIREAGHDLLWVEDPIL-------RHD----HDGLRTLRHAVT-WTQINSGEYL-DLQGKRLLLE 263 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEESCBC-------TTC----HHHHHHHHHHCC-SSEEEECTTC-CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCceEEeCCCC-------CcC----HHHHHHHHhhCC-CCCEEeCCCC-CHHHHHHHHH
Confidence 56776677777778 78999975431 111 134455555542 5777777788 9999999994
No 266
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=82.52 E-value=5.5 Score=41.34 Aligned_cols=62 Identities=16% Similarity=0.097 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCCEEEcCCCCCC----CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 287 CASMTAMFAGSDFIKTSTGKEK----TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTSTGf~~----~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
..++.+.++|+++| +-|+-.. .|... +.++.+++.+ ++.|=+||||+|.+++.+++. ..|++
T Consensus 456 e~a~~~~~~Ga~~i-l~t~~~~dG~~~G~d~-------~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~----~~G~~ 521 (555)
T 1jvn_A 456 ELTRACEALGAGEI-LLNCIDKDGSNSGYDL-------ELIEHVKDAV--KIPVIASSGAGVPEHFEEAFL----KTRAD 521 (555)
T ss_dssp HHHHHHHHTTCCEE-EECCGGGTTTCSCCCH-------HHHHHHHHHC--SSCEEECSCCCSHHHHHHHHH----HSCCS
T ss_pred HHHHHHHHcCCCEE-EEeCCCCCCCCCCCCH-------HHHHHHHHhC--CccEEEECCCCCHHHHHHHHH----hcCCh
Confidence 45677889999988 4555322 24444 3455565553 577889999999999999994 37874
No 267
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=82.47 E-value=20 Score=34.84 Aligned_cols=144 Identities=10% Similarity=0.038 Sum_probs=96.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
..+.+.-+.+++.+++.|.+-+-+=+.. ++.+.-.+-+++|+++.++ -+.+.+....-=+.++-.+.++...+
T Consensus 144 ~~~~~~~~~~a~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~~~g~--~~~l~vDan~~~~~~~A~~~~~~l~~ 216 (377)
T 3my9_A 144 DPDFDADLERMRAMVPAGHTVFKMKTGV-----KPHAEELRILETMRGEFGE--RIDLRLDFNQALTPFGAMKILRDVDA 216 (377)
T ss_dssp CSSHHHHHHHHHHHTTTTCCEEEEECSS-----SCHHHHHHHHHHHHHHHGG--GSEEEEECTTCCCTTTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC-----CcHHHHHHHHHHHHHHhCC--CCeEEEeCCCCcCHHHHHHHHHHHhh
Confidence 3466777788999999999988764421 2345556667888888865 35566665322255666677777888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|.+||--+.. +++. +..+.+++.+ .+.|=+-+-+.+..++..++. .-+++.++++..|+|.
T Consensus 217 ~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~----~~~~d~v~~k~~~~GGi 279 (377)
T 3my9_A 217 FRPTFIEQPVP-------RRHL----DAMAGFAAAL--DTPILADESCFDAVDLMEVVR----RQAADAISVKIMKCGGL 279 (377)
T ss_dssp TCCSCEECCSC-------TTCH----HHHHHHHHHC--SSCEEESTTCSSHHHHHHHHH----HTCCSEEECCHHHHTSH
T ss_pred cCCCEEECCCC-------ccCH----HHHHHHHHhC--CCCEEECCccCCHHHHHHHHH----cCCCCEEEecccccCCH
Confidence 89999985432 1111 3445555543 356666667899999999995 3457888999999964
Q ss_pred cchHHHHHH
Q psy10250 374 SSLLNNILQ 382 (387)
Q Consensus 374 Ss~~~il~~ 382 (387)
+..+++..-
T Consensus 280 t~~~~i~~~ 288 (377)
T 3my9_A 280 MKAQSLMAI 288 (377)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556655543
No 268
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=82.43 E-value=40 Score=33.51 Aligned_cols=142 Identities=8% Similarity=-0.015 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
.+.+.-..+++.+.+.|.+-+.+ +.+ ++.+...+=+++|++++++. +.+.+...---+.++-.+.++...+.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKi--k~g----~~~~~d~e~v~avR~a~G~d--~~l~vDan~~~~~~~a~~~~~~l~~~ 268 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKL--KVG----ANVQDDIRRCRLARAAIGPD--IAMAVDANQRWDVGPAIDWMRQLAEF 268 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEE--ECC----SCHHHHHHHHHHHHHHHCSS--SEEEEECTTCCCHHHHHHHHHTTGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--ccC----CCHHHHHHHHHHHHHhcCCC--CeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 35666778899999999998885 333 24556666788888888753 45566653322567666777777778
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--..- +++. +..+.+++.++ .+.|=+-+.+.+.+++..++. .-.++.++++..|+|. +
T Consensus 269 ~i~~iEqP~~-------~~d~----~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGit 332 (441)
T 2hxt_A 269 DIAWIEEPTS-------PDDV----LGHAAIRQGIT-PVPVSTGEHTQNRVVFKQLLQ----AGAVDLIQIDAARVGGVN 332 (441)
T ss_dssp CCSCEECCSC-------TTCH----HHHHHHHHHHT-TSCEEECTTCCSHHHHHHHHH----HTCCSEECCCTTTSSHHH
T ss_pred CCCeeeCCCC-------HHHH----HHHHHHHhhCC-CCCEEEeCCcCCHHHHHHHHH----cCCCCEEEeCcceeCCHH
Confidence 9999985432 1211 24445555443 466777778999999999995 3447888999999864 5
Q ss_pred chHHHHH
Q psy10250 375 SLLNNIL 381 (387)
Q Consensus 375 s~~~il~ 381 (387)
..+++..
T Consensus 333 e~~~ia~ 339 (441)
T 2hxt_A 333 ENLAILL 339 (441)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 269
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=82.31 E-value=18 Score=35.31 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=78.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhh----hc-------CCh--------hHHHHHHHHHHHHhCCC-cceEEEEe----ec
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLV----LN-------NQW--------PELFSEVKQMKEKCGEK-IHMKTILA----VG 277 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~l----k~-------g~~--------~~v~~Ei~~v~~~~~~~-~~lKvIlE----t~ 277 (387)
+.-|+.|.+.|.|-|++=--=|+| +| .+| ..+.+=+++|++++++. ..+|+=-. -+
T Consensus 155 ~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~ 234 (358)
T 4a3u_A 155 EKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGT 234 (358)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTB
T ss_pred HHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCC
Confidence 455889999999999986543333 22 112 24445567888888752 12222111 11
Q ss_pred -cCCChHHHHHHHHHHHHcCCCEEEcCCCCCCC----CCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 278 -ELKTSENIYCASMTAMFAGSDFIKTSTGKEKT----NATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 278 -~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~----gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
...+.++...+++...+.|.||+-.|.|.... +..++ +... +++.....+ +.|||.|.++|.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~a~~---ik~~~~~~v---~~~g~~~~~~ae~~l 304 (358)
T 4a3u_A 235 VDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPK----LSPE---IRKVFKPPL---VLNQDYTFETAQAAL 304 (358)
T ss_dssp CCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCC----CHHH---HHHHCCSCE---EEESSCCHHHHHHHH
T ss_pred cccchHHHHHHHHHhhhccCccccccccccccCcccccccHH----HHHH---HHHhcCCcE---EEeCCCCHHHHHHHH
Confidence 12123445667888889999999988874321 11222 1223 344444433 479999999999999
Q ss_pred HHHHHhcCCCccCCCcceeeccc
Q psy10250 353 YLVLIMLGPDWLNKDLFRIGASS 375 (387)
Q Consensus 353 ~l~~~~~Ga~w~~~~~~RIGtSs 375 (387)
. -|. ++-||..+
T Consensus 305 ~-----~G~------aD~V~~gR 316 (358)
T 4a3u_A 305 D-----SGV------ADAISFGR 316 (358)
T ss_dssp H-----HTS------CSEEEESH
T ss_pred H-----cCC------ceEeHhhH
Confidence 4 563 35666654
No 270
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=82.25 E-value=4.1 Score=39.99 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHcCCCEEEc--CCCC--------------CCCCCChh-hhHhHHHHHHHHHHHcCC-CceEeEecc--CC
Q psy10250 284 NIYCASMTAMFAGSDFIKT--STGK--------------EKTNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAGG--IS 343 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKT--STGf--------------~~~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasGG--Ir 343 (387)
+..+|++.|.++|.|.|+- +-|| ...|-+++ ..+..++-|+.+++.++. .++||.|.+ ..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 3446788899999999996 2232 11222333 344455667777888874 799999976 22
Q ss_pred -------CHHHHHHHHHHHHHhcCCCccC
Q psy10250 344 -------TFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 344 -------t~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+.+++..+...++ .+|++|++
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~-~~G~d~i~ 269 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELA-KRGIAYLH 269 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHH-HTTCSEEE
T ss_pred cccCCCCCHHHHHHHHHHHH-HhCCCEEE
Confidence 5667666665443 57998874
No 271
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.01 E-value=6 Score=36.10 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=61.7
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE---E
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI---K 301 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV---K 301 (387)
++.+.+.|||-+=+-.- .+ ..+...+.++.+++ . -+|+.+-..- .|+.+..+ ....++||| -
T Consensus 78 i~~~~~aGadgv~vh~e--~~---~~~~~~~~~~~i~~---~--g~~~gv~~~p-~t~~e~~~----~~~~~~D~v~~ms 142 (230)
T 1tqj_A 78 VEDFAKAGADIISVHVE--HN---ASPHLHRTLCQIRE---L--GKKAGAVLNP-STPLDFLE----YVLPVCDLILIMS 142 (230)
T ss_dssp HHHHHHHTCSEEEEECS--TT---TCTTHHHHHHHHHH---T--TCEEEEEECT-TCCGGGGT----TTGGGCSEEEEES
T ss_pred HHHHHHcCCCEEEECcc--cc---cchhHHHHHHHHHH---c--CCcEEEEEeC-CCcHHHHH----HHHhcCCEEEEEE
Confidence 57788889987654422 00 11334455555543 1 2577776632 23332221 233489999 3
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
.-.||+.... .+ .+.+.|+.+++.. +..+.|=+-|||+. +++..+. .+|+|.
T Consensus 143 v~pg~ggq~~-~~---~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~-----~aGad~ 197 (230)
T 1tqj_A 143 VNPGFGGQSF-IP---EVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVL-----EAGANA 197 (230)
T ss_dssp SCC----CCC-CG---GGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHH-----HHTCCE
T ss_pred eccccCCccC-cH---HHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHH-----HcCCCE
Confidence 3445543221 11 1234445544443 34688889999998 8898888 589864
No 272
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=81.76 E-value=23 Score=33.11 Aligned_cols=134 Identities=8% Similarity=0.037 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc-
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA- 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a- 295 (387)
..+.-+..+++.++.|||=||+-... ..-...+|+++++........+-+.|.|. ..+-+ +.|.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~------~~v~~~ee~~rvv~~i~~~~~~pisIDT~---~~~v~----~aAl~a~ 89 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGP------AVQDKVSAMEWLVEVTQEVSNLTLCLDST---NIKAI----EAGLKKC 89 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------CHHHHHHHHHHHHHTTCCSEEEEECS---CHHHH----HHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCC------CCCChHHHHHHHHHHHHHhCCCeEEEeCC---CHHHH----HHHHhhC
Confidence 45666778999999999999998621 12336678888887775422355666665 33433 345555
Q ss_pred -CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe--ccC-CCHHHH----HHHHHHHHHhcCCC----c
Q psy10250 296 -GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA--GGI-STFEDS----VRWIYLVLIMLGPD----W 363 (387)
Q Consensus 296 -GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas--GGI-rt~~~a----~~~i~l~~~~~Ga~----w 363 (387)
|++.|..-+|+. +....|+..++. .+-.+-+-.. .|+ +|.++- .+.+..+. .+|.. +
T Consensus 90 ~Ga~iINdvs~~~------d~~~~~~~~~a~----~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~-~~Gi~~~~Ii 158 (262)
T 1f6y_A 90 KNRAMINSTNAER------EKVEKLFPLAVE----HGAALIGLTMNKTGIPKDSDTRLAFAMELVAAAD-EFGLPMEDLY 158 (262)
T ss_dssp SSCEEEEEECSCH------HHHHHHHHHHHH----TTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHH-HHTCCGGGEE
T ss_pred CCCCEEEECCCCc------ccHHHHHHHHHH----hCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCcccEE
Confidence 999999878751 222234433332 3445555555 344 555443 33333333 57875 5
Q ss_pred cCCCcceeecc
Q psy10250 364 LNKDLFRIGAS 374 (387)
Q Consensus 364 ~~~~~~RIGtS 374 (387)
++|+..=+|.+
T Consensus 159 lDPg~g~~g~~ 169 (262)
T 1f6y_A 159 IDPLILPANVA 169 (262)
T ss_dssp EECCCCCTTTC
T ss_pred EeCCCCcCCCC
Confidence 57877545554
No 273
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=81.56 E-value=32 Score=33.70 Aligned_cols=144 Identities=10% Similarity=0.014 Sum_probs=97.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
.|..+.+.-+.+++.+++.|.+-+-+=+. ++.+.-.+-+++|+++.++ -+.+.+....-=+.++-.+.++..
T Consensus 138 ~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g------~~~~~d~~~v~avR~a~g~--~~~L~vDaN~~w~~~~A~~~~~~l 209 (379)
T 3r0u_A 138 ISCGNVAETIQNIQNGVEANFTAIKVKTG------ADFNRDIQLLKALDNEFSK--NIKFRFDANQGWNLAQTKQFIEEI 209 (379)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCEEEEECS------SCHHHHHHHHHHHHHHCCT--TSEEEEECTTCCCHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEeeecC------CCHHHHHHHHHHHHHhcCC--CCeEEEeCCCCcCHHHHHHHHHHH
Confidence 35567888888999999999998876442 2455556667788888875 256777764333667777778877
Q ss_pred HH--cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcc
Q psy10250 293 MF--AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLF 369 (387)
Q Consensus 293 ~~--aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~ 369 (387)
.+ .|.+||--+.. +++. +..+.+++.+ .+.|=+-.-+.+..++..++. .| +++++++..
T Consensus 210 ~~~~~~l~~iEeP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~-----~~a~d~v~~k~~ 271 (379)
T 3r0u_A 210 NKYSLNVEIIEQPVK-------YYDI----KAMAEITKFS--NIPVVADESVFDAKDAERVID-----EQACNMINIKLA 271 (379)
T ss_dssp HTSCCCEEEEECCSC-------TTCH----HHHHHHHHHC--SSCEEESTTCSSHHHHHHHHH-----TTCCSEEEECHH
T ss_pred hhcCCCcEEEECCCC-------cccH----HHHHHHHhcC--CCCEEeCCccCCHHHHHHHHH-----cCCCCEEEECcc
Confidence 77 78999985543 1111 3445555543 355555556899999999984 54 677888888
Q ss_pred eee-ccchHHHHHH
Q psy10250 370 RIG-ASSLLNNILQ 382 (387)
Q Consensus 370 RIG-tSs~~~il~~ 382 (387)
|+| -+..+++..-
T Consensus 272 ~~GGi~~~~~ia~~ 285 (379)
T 3r0u_A 272 KTGGILEAQKIKKL 285 (379)
T ss_dssp HHTSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 886 4555555443
No 274
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=81.46 E-value=5.3 Score=45.24 Aligned_cols=93 Identities=14% Similarity=0.061 Sum_probs=62.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
.++.+.=+.-++.+.+.||+.|-+.=-.|.+ ....+++=++.+++.. .+.|+...=+|...-...+..|++
T Consensus 705 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~~~~lv~~l~~~~------~~~i~~H~Hnd~GlAvAn~laAv~ 775 (1165)
T 2qf7_A 705 KYDLKYYTNLAVELEKAGAHIIAVKDMAGLL---KPAAAKVLFKALREAT------GLPIHFHTHDTSGIAAATVLAAVE 775 (1165)
T ss_dssp GGCHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHC------SSCEEEEECBTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCccCCc---CHHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHHH
Confidence 3567777777899999999988665334433 3677788888888755 234555444443434445678999
Q ss_pred cCCCEEEcCC-CCC--CCCCChhhh
Q psy10250 295 AGSDFIKTST-GKE--KTNATIPAG 316 (387)
Q Consensus 295 aGaDfVKTST-Gf~--~~gat~~~~ 316 (387)
+|||.|-++- |+| .+++.++.+
T Consensus 776 aGa~~vd~ti~GlGe~~Gn~~le~v 800 (1165)
T 2qf7_A 776 AGVDAVDAAMDALSGNTSQPCLGSI 800 (1165)
T ss_dssp TTCSEEEEBCGGGCSBTSCCBHHHH
T ss_pred hCCCEEEecccccCCCccchhHHHH
Confidence 9999999876 444 456666543
No 275
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=81.36 E-value=12 Score=34.90 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=26.2
Q ss_pred HHHHHHHHHcCC--CceEeEeccCCCHHHHHHHHH
Q psy10250 321 SAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 321 ~~v~~~~~~~~~--~~gIKasGGIrt~~~a~~~i~ 353 (387)
+.++.+++.++. .+.|=+||||+|++++..++.
T Consensus 191 eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~ 225 (260)
T 2agk_A 191 LLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDE 225 (260)
T ss_dssp HHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHH
T ss_pred HHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHH
Confidence 456666666532 688999999999999999995
No 276
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=80.90 E-value=36 Score=33.44 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=92.5
Q ss_pred HHHHHHHHHHCCCCeeee-ecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC-ChHHHHHHHHHHHHcCCC
Q psy10250 221 RLHEIELLAKQKVDEVDI-VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-TSENIYCASMTAMFAGSD 298 (387)
Q Consensus 221 K~~Ea~~Ai~~GAdEID~-Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~-t~e~i~~a~~ia~~aGaD 298 (387)
-..+++.+++.|.+-+=+ -+... ..+.+.-.+=+++|++++++. +.+.+....=- +.++-.+.++...+.|.+
T Consensus 161 ~~~~a~~~~~~G~~~~K~~k~g~~---~~~~~~d~e~v~avR~a~G~d--~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~ 235 (394)
T 3mkc_A 161 YAPLLEKAKAHNIRAVKVCVPIKA---DWSTKEVAYYLRELRGILGHD--TDMMVDYLYRFTDWYEVARLLNSIEDLELY 235 (394)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTC---CCCHHHHHHHHHHHHHHHCSS--SEEEEECTTCCCCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHcCCCEEEeCccCCC---ccCHHHHHHHHHHHHHHhCCC--CeEEEeCCCCCCCHHHHHHHHHHhhhcCCe
Confidence 345788899999998876 33210 024555566678888888753 45666654322 556666777777888999
Q ss_pred EEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cchH
Q psy10250 299 FIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLL 377 (387)
Q Consensus 299 fVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~ 377 (387)
||--+..- ..+ +..+.+++.+ ++.|=+-+.+.+..++..++. .-+++.++++..|+|. +..+
T Consensus 236 ~iEeP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~----~~~~d~v~~k~~~~GGit~~~ 298 (394)
T 3mkc_A 236 FAEATLQH----DDL-------SGHAKLVENT--RSRICGAEMSTTRFEAEEWIT----KGKVHLLQSDYNRCGGLTELR 298 (394)
T ss_dssp EEESCSCT----TCH-------HHHHHHHHHC--SSCBEECTTCCHHHHHHHHHH----TTCCSEECCCTTTTTHHHHHH
T ss_pred EEECCCCc----hhH-------HHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHH----cCCCCeEecCccccCCHHHHH
Confidence 99865421 122 3445555554 466767778999999999994 2347888999999964 5555
Q ss_pred HHHH
Q psy10250 378 NNIL 381 (387)
Q Consensus 378 ~il~ 381 (387)
++..
T Consensus 299 ~ia~ 302 (394)
T 3mkc_A 299 RITE 302 (394)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 277
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=80.76 E-value=39 Score=31.95 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=94.4
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 281 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t 281 (387)
+-++.+ .=|+.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+++ ..+.||.=++-.++
T Consensus 12 v~~a~v-TPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-~rvpviaGvg~~~t 89 (301)
T 3m5v_A 12 AMTALI-TPFKNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG-TKVKVLAGAGSNAT 89 (301)
T ss_dssp EEEECC-CCEETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEECCCSSH
T ss_pred eeEeee-cCcCCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCCeEEEeCCCCCH
Confidence 434444 5676677777888888999999999997444444544444455555556666666653 25899999999866
Q ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCCce
Q psy10250 282 SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKKIG 335 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~~g 335 (387)
++..+.++.|.++|+|.+=-.+-|... .|.+....-+ +.+..+.+..++=+|
T Consensus 90 -~~ai~la~~a~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivg 167 (301)
T 3m5v_A 90 -HEAVGLAKFAKEHGADGILSVAPYYNK-PTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYG 167 (301)
T ss_dssp -HHHHHHHHHHHHTTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEE
T ss_pred -HHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEE
Confidence 456677899999999988776654321 2322222111 234444454477799
Q ss_pred EeEeccCCCHHHHHHHHH
Q psy10250 336 LKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 336 IKasGGIrt~~~a~~~i~ 353 (387)
||-|.| +..+..+++.
T Consensus 168 iKdssg--d~~~~~~~~~ 183 (301)
T 3m5v_A 168 VKEASG--NIDKCVDLLA 183 (301)
T ss_dssp EEECSS--CHHHHHHHHH
T ss_pred EEeCCC--CHHHHHHHHH
Confidence 999876 6666666664
No 278
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=80.75 E-value=25 Score=31.32 Aligned_cols=128 Identities=16% Similarity=0.209 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeee-cCch-hhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeecc-CC--C-------h
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIV-IQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE-LK--T-------S 282 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~V-in~~-~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~-L~--t-------~ 282 (387)
.+.+.. .+.+.+.|.+-|++. .+.. .+.+. .++.++++.+.. .-+++. +-... |. + .
T Consensus 14 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~------~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~ 83 (278)
T 1i60_A 14 SNLKLD---LELCEKHGYDYIEIRTMDKLPEYLKD------HSLDDLAEYFQT-HHIKPLALNALVFFNNRDEKGHNEII 83 (278)
T ss_dssp CCHHHH---HHHHHHTTCSEEEEETTTHHHHHTTS------SCHHHHHHHHHT-SSCEEEEEEEEECCSSCCHHHHHHHH
T ss_pred CCHHHH---HHHHHHhCCCEEEEccHHHHHHHhcc------CCHHHHHHHHHH-cCCCeeeeccccccccCCHHHHHHHH
Confidence 445444 345567899999998 6532 11111 233444444433 234544 33322 32 2 2
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCCCCC-hhhhHhHHHHHHHHHHHc---CCCceEeEec----cCCCHHHHHHHHH
Q psy10250 283 ENIYCASMTAMFAGSDFIKTSTGKEKTNAT-IPAGIIMCSAIKHFHKLS---GKKIGLKPAG----GISTFEDSVRWIY 353 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTSTGf~~~gat-~~~~~~m~~~v~~~~~~~---~~~~gIKasG----GIrt~~~a~~~i~ 353 (387)
+.+.++.+.|.+.|+++|.+.+|+.+.+.+ .+....+.+.++.+.+.. |-++.+-.-+ -+.|.+++..+++
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~ 162 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVN 162 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHH
Confidence 346678889999999999997777544334 233344455555554443 4456665544 3579999999986
No 279
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=80.62 E-value=5.9 Score=39.96 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=55.3
Q ss_pred HHHHHHHHcCCCeeeeecchhHHh-----cCChhHHHHHHHHHHHHccc-CccEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy10250 14 HEIELLAKQKVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCEE-KIHMKTILAVGELKTSENIYYASMTAMFAG 87 (387)
Q Consensus 14 ~E~~~a~~~GA~EiD~Vin~~~lk-----~g~~~~v~~ei~~v~~~~~~-~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag 87 (387)
..++.|++.|+++|.+++..+.+. ..+++++.+.+..+++.+.. +..+.+-+|.++-.+.+...+.++.+.++|
T Consensus 114 ~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~G 193 (423)
T 3ivs_A 114 DDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIG 193 (423)
T ss_dssp HHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhC
Confidence 346889999999999998776542 34577788888888877653 345666678877667788888999999999
Q ss_pred CCEE
Q psy10250 88 SDFI 91 (387)
Q Consensus 88 ~dfv 91 (387)
+|.|
T Consensus 194 a~~i 197 (423)
T 3ivs_A 194 VNRV 197 (423)
T ss_dssp CSEE
T ss_pred CCcc
Confidence 9863
No 280
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=80.56 E-value=2 Score=40.02 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCC---CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEK---TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~---~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
|.+|+.+ |.+.|+|||..+.=|.. .++.+ .=.+.++.+++..+..+.|=+.||| |.+++..++
T Consensus 144 t~~Ea~~----A~~~GaDyI~vgpvf~T~tK~~~~~----~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~----- 209 (243)
T 3o63_A 144 DPDQVAA----AAAGDADYFCVGPCWPTPTKPGRAA----PGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVL----- 209 (243)
T ss_dssp SHHHHHH----HHHSSCSEEEECCSSCCCC-----C----CCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHH-----
T ss_pred CHHHHHH----HhhCCCCEEEEcCccCCCCCCCcch----hhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHH-----
Confidence 5566544 45689999997664421 11111 0013344443332246888899999 899999999
Q ss_pred hcCCC
Q psy10250 358 MLGPD 362 (387)
Q Consensus 358 ~~Ga~ 362 (387)
.+|++
T Consensus 210 ~aGa~ 214 (243)
T 3o63_A 210 DAGAR 214 (243)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 58984
No 281
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=80.52 E-value=2.2 Score=40.02 Aligned_cols=123 Identities=14% Similarity=0.103 Sum_probs=67.5
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE--
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK-- 301 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK-- 301 (387)
-++.+.+.|||-|=+- ... . +.+.+-++.+++ .-+|+.+...-=+..+.+. .+ -.++|||=
T Consensus 101 ~i~~~~~aGAd~itvH--~Ea---~--~~~~~~i~~ir~-----~G~k~Gvalnp~Tp~e~l~---~~--l~~vD~VlvM 163 (246)
T 3inp_A 101 LIESFAKAGATSIVFH--PEA---S--EHIDRSLQLIKS-----FGIQAGLALNPATGIDCLK---YV--ESNIDRVLIM 163 (246)
T ss_dssp HHHHHHHHTCSEEEEC--GGG---C--SCHHHHHHHHHT-----TTSEEEEEECTTCCSGGGT---TT--GGGCSEEEEE
T ss_pred HHHHHHHcCCCEEEEc--ccc---c--hhHHHHHHHHHH-----cCCeEEEEecCCCCHHHHH---HH--HhcCCEEEEe
Confidence 4677889999976543 222 1 234444555543 1256666554332223222 11 12689884
Q ss_pred -cCCCCCCCCCChhhhHhHHHHHHHHHHH---cCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 302 -TSTGKEKTNATIPAGIIMCSAIKHFHKL---SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 302 -TSTGf~~~gat~~~~~~m~~~v~~~~~~---~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
...||+...--+ .+++.|+.+++. .+..+.|=+-|||+ .+++..+. .+|+|++-.|..-++.
T Consensus 164 sV~PGfgGQ~fi~----~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~-----~aGAD~~V~GSaIf~a 229 (246)
T 3inp_A 164 SVNPGFGGQKFIP----AMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIA-----VCGVNAFVAGSAIFNS 229 (246)
T ss_dssp CSCTTC--CCCCT----THHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHH-----TTTCCEEEESHHHHTS
T ss_pred eecCCCCCcccch----HHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHH-----HcCCCEEEEehHHhCC
Confidence 246885432112 223455555544 34568899999999 68888888 6999754444333333
No 282
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=80.50 E-value=6.2 Score=38.09 Aligned_cols=79 Identities=15% Similarity=0.174 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCCEEEc--CCCC------CC--------CCCChh-hhHhHHHHHHHHHHHcCCCceEeEec------c
Q psy10250 285 IYCASMTAMFAGSDFIKT--STGK------EK--------TNATIP-AGIIMCSAIKHFHKLSGKKIGLKPAG------G 341 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKT--STGf------~~--------~gat~~-~~~~m~~~v~~~~~~~~~~~gIKasG------G 341 (387)
..+|++.+.++|.|.|+- +-|| ++ .|-+++ ..+.+++-|+.+++.+...++||.|. |
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTS
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCC
Confidence 346788899999999984 3333 01 233443 34445666777777777899999987 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 342 ISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 342 Irt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
. +.+++..+....+ .+|++|++
T Consensus 226 ~-~~~~~~~~a~~l~-~~Gvd~i~ 247 (338)
T 1z41_A 226 L-DIADHIGFAKWMK-EQGVDLID 247 (338)
T ss_dssp C-CHHHHHHHHHHHH-HTTCCEEE
T ss_pred C-CHHHHHHHHHHHH-HcCCCEEE
Confidence 4 6777777776544 57999885
No 283
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=80.21 E-value=15 Score=34.22 Aligned_cols=122 Identities=8% Similarity=-0.051 Sum_probs=70.8
Q ss_pred CCCeEEEEECCc-------------cHHHHHHHhhhcCCCCCceEEEEecCCCC-------CCCCHHHH-------HHHH
Q psy10250 173 NVHTAAVCVYPA-------------RVVDVIKVLDRENARDDVKVASVAAGFPS-------GQYLLETR-------LHEI 225 (387)
Q Consensus 173 ~~~~~aVcV~P~-------------~v~~a~~~L~~~~~~~~v~v~tVvigFP~-------G~~~~e~K-------~~Ea 225 (387)
+.||.+|=+... .+...++.++. .++++.++. .+|. +....+.+ ...+
T Consensus 46 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~----~Gl~i~~~~-~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i 120 (316)
T 3qxb_A 46 DLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK----AGLTIESTF-GGLASYTYNHFLAPTLELQSLGYQHLKRAI 120 (316)
T ss_dssp TSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH----TTCEEEEEE-CCHHHHTSCBTTCSSHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEeeccccCccccccchhhHHHHHHHHHHH----cCCeEEEee-ccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 678888877432 35667777775 689988763 4432 22222221 2346
Q ss_pred HHHHHCCCCeeeeecCchh-----h-----hcCChhHHHHHHHHHHHHhCCCcceE-EEEee-----ccCCChHHHHHHH
Q psy10250 226 ELLAKQKVDEVDIVIQRSL-----V-----LNNQWPELFSEVKQMKEKCGEKIHMK-TILAV-----GELKTSENIYCAS 289 (387)
Q Consensus 226 ~~Ai~~GAdEID~Vin~~~-----l-----k~g~~~~v~~Ei~~v~~~~~~~~~lK-vIlEt-----~~L~t~e~i~~a~ 289 (387)
+.|.+.||.-| |+..+. + ....|+.+.+-++++.+.+.. .-++ +-||+ ..+.+.++..+..
T Consensus 121 ~~A~~lGa~~v--~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~~l~lE~~~~~~~~~~t~~~~~~l~ 197 (316)
T 3qxb_A 121 DMTAAMEVPAT--GMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKR-QGLSMLYVEPVPLATEFPSSAADAARLM 197 (316)
T ss_dssp HHHHHTTCCEE--EECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEECCCSCTTBSSCSHHHHHHHH
T ss_pred HHHHHcCCCEE--EecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEEecCCccccCCCHHHHHHHH
Confidence 77888999976 433332 1 112355666667777766653 3477 99998 3455666655554
Q ss_pred HHHHHcCCCEEEc
Q psy10250 290 MTAMFAGSDFIKT 302 (387)
Q Consensus 290 ~ia~~aGaDfVKT 302 (387)
+.....|.+.|+-
T Consensus 198 ~~v~~~~~~~vg~ 210 (316)
T 3qxb_A 198 ADLDGRTEIPVRL 210 (316)
T ss_dssp HHHTTTSSSCEEE
T ss_pred HHHhccCCCCEEE
Confidence 4433326665553
No 284
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=79.89 E-value=17 Score=35.26 Aligned_cols=149 Identities=11% Similarity=-0.015 Sum_probs=95.6
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
..+++... +|. .+.+.-..+++.+++.|.+-+.+= .+. ++.+...+=+++|++++++. +.+.+....-
T Consensus 133 ~~v~~~~~-~~~----~~~e~~~~~a~~~~~~Gf~~iKik--~g~---~~~~~~~e~v~avr~a~g~~--~~l~vDan~~ 200 (378)
T 2qdd_A 133 TPVPINSS-IST----GTPDQMLGLIAEAAAQGYRTHSAK--IGG---SDPAQDIARIEAISAGLPDG--HRVTFDVNRA 200 (378)
T ss_dssp CCEEBEEE-ECS----CCHHHHHHHHHHHHHHTCCEEEEE--CCS---SCHHHHHHHHHHHHHSCCTT--CEEEEECTTC
T ss_pred CCCceEEE-ecC----CCHHHHHHHHHHHHHHhhhheeec--CCC---CChHHHHHHHHHHHHHhCCC--CEEEEeCCCC
Confidence 35665544 332 456777888999999999999863 221 24566667788888888652 4566665432
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
-+.++..+.++... .|. ||--.. . .. +..+.+++.+ ++.|=+-+-+.+.+++..++. .-
T Consensus 201 ~~~~~a~~~~~~l~-~~i-~iEqP~-----~-d~-------~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~----~~ 259 (378)
T 2qdd_A 201 WTPAIAVEVLNSVR-ARD-WIEQPC-----Q-TL-------DQCAHVARRV--ANPIMLDECLHEFSDHLAAWS----RG 259 (378)
T ss_dssp CCHHHHHHHHTSCC-CCC-EEECCS-----S-SH-------HHHHHHHTTC--CSCEEECTTCCSHHHHHHHHH----HT
T ss_pred CCHHHHHHHHHHhC-CCc-EEEcCC-----C-CH-------HHHHHHHHhC--CCCEEECCCcCCHHHHHHHHH----hC
Confidence 25555555555444 799 996432 1 23 3445554432 466777777899999999995 45
Q ss_pred CCCccCCCcceeec-cchHHHHH
Q psy10250 360 GPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 360 Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+++.++.+..++|. +..+++..
T Consensus 260 ~~d~v~ik~~~~GGi~~~~~i~~ 282 (378)
T 2qdd_A 260 ACEGVKIKPNRVGGLTRARQIRD 282 (378)
T ss_dssp CCSEEEECHHHHTSHHHHHHHHH
T ss_pred CCCEEEecccccCCHHHHHHHHH
Confidence 57888888888865 44555443
No 285
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=79.88 E-value=25 Score=35.05 Aligned_cols=157 Identities=8% Similarity=0.026 Sum_probs=101.1
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh----------------h---cC--------ChhH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV----------------L---NN--------QWPE 252 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l----------------k---~g--------~~~~ 252 (387)
..+++-+.+ + ..+.+.-+.+++.+++.|.+-+=+=+....+ . .+ +.+.
T Consensus 137 ~~v~~y~~~-~----~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~ 211 (424)
T 3v3w_A 137 ERILSYTHA-N----GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNY 211 (424)
T ss_dssp SSEEEEEEE-E----ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHH
T ss_pred CceeEEEeC-C----CCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHH
Confidence 356665442 2 2467777889999999999887653321000 0 00 0123
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
..+=+++|++++++. +.+++....=-+.++-.+.++...+.|.+||--+.-- -.++ ..+.+++.+
T Consensus 212 d~e~v~avR~avG~d--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~----~d~~-------~~~~l~~~~-- 276 (424)
T 3v3w_A 212 IPDVFAAVRKEFGPD--IHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPA----ENQE-------SFKLIRQHT-- 276 (424)
T ss_dssp HHHHHHHHHHHHCSS--SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCC----SSTT-------HHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCC--CcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCCh----HhHH-------HHHHHHhhC--
Confidence 344467888888753 5666775433367777778888888999999866531 1232 345555553
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcceeec-cchHHHHH
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.+.|=+-+.+.+..++..++. .| ++.++++..|+|. +.++++..
T Consensus 277 ~iPIa~dE~~~~~~~~~~~i~-----~ga~d~v~~k~~~~GGit~~~~ia~ 322 (424)
T 3v3w_A 277 TTPLAVGEVFNSIHDCRELIQ-----NQWIDYIRTTIVHAGGISQMRRIAD 322 (424)
T ss_dssp CSCEEECTTCCSGGGTHHHHH-----TTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred CCCEEEccCcCCHHHHHHHHH-----cCCCCeEeecchhcCCHHHHHHHHH
Confidence 466777778999999999994 54 7888999999964 55555544
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=79.86 E-value=14 Score=40.94 Aligned_cols=112 Identities=9% Similarity=-0.030 Sum_probs=70.5
Q ss_pred CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCC------CCCCCCh-hhhHhHH
Q psy10250 248 NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGK------EKTNATI-PAGIIMC 320 (387)
Q Consensus 248 g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf------~~~gat~-~~~~~m~ 320 (387)
...++..+++..+++..++ .++=+.+ ..-.+.++..++++.+.++|+|+|--.-|- ...|..+ .....+.
T Consensus 616 ~~~~~~~~~i~~~~~~~~~-~~~i~~i--~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~ 692 (1025)
T 1gte_A 616 KTAAYWCQSVTELKADFPD-NIVIASI--MCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVR 692 (1025)
T ss_dssp SCHHHHHHHHHHHHHHCTT-SEEEEEE--CCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCC-CCeEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHH
Confidence 3456777888888776544 3332322 112256788889999999999999874331 1112222 2334445
Q ss_pred HHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCC
Q psy10250 321 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 366 (387)
Q Consensus 321 ~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~ 366 (387)
+.++.+++.++-.+.+|.+.++.+..+....+. .+|++.+..
T Consensus 693 ~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~----~~G~d~i~v 734 (1025)
T 1gte_A 693 NICRWVRQAVQIPFFAKLTPNVTDIVSIARAAK----EGGADGVTA 734 (1025)
T ss_dssp HHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHH----HHTCSEEEE
T ss_pred HHHHHHHHhhCCceEEEeCCChHHHHHHHHHHH----HcCCCEEEE
Confidence 566667777778899999999887655444332 689988754
No 287
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=79.83 E-value=6.2 Score=36.18 Aligned_cols=121 Identities=13% Similarity=0.118 Sum_probs=69.2
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE--
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK-- 301 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK-- 301 (387)
-++.+.+.|||-|=+-. . .. +...+-++.+++. + +|+.+-..-=++.+.+. .+. ..+|||=
T Consensus 79 ~i~~~~~aGad~itvH~--E---a~--~~~~~~i~~i~~~-G----~k~gval~p~t~~e~l~---~~l--~~~D~Vl~m 141 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHL--E---AT--ENPGALIKDIREN-G----MKVGLAIKPGTSVEYLA---PWA--NQIDMALVM 141 (228)
T ss_dssp GHHHHHHHTCSEEEEEG--G---GC--SCHHHHHHHHHHT-T----CEEEEEECTTSCGGGTG---GGG--GGCSEEEEE
T ss_pred HHHHHHHcCCCEEEEcc--C---Cc--hhHHHHHHHHHHc-C----CCEEEEEcCCCCHHHHH---HHh--ccCCeEEEe
Confidence 46678889999766532 1 12 2345556666542 2 35555443222223222 111 3488883
Q ss_pred -cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 302 -TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 302 -TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
-.+||+...-.+ .+++.|+.+++.. ..+.|=+-|||+ .+++..++ .+|+|++-.|..-++
T Consensus 142 sv~pGf~Gq~f~~----~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~-----~aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 142 TVEPGFGGQKFME----DMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCA-----EAGANMIVSGSAIMR 202 (228)
T ss_dssp SSCTTTCSCCCCG----GGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHH-----HHTCCEEEESHHHHT
T ss_pred eecCCCCCcccCH----HHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHH-----HcCCCEEEEeHHHhC
Confidence 256885432222 2345677777764 457899999996 78899998 599975443333333
No 288
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=79.79 E-value=8 Score=37.98 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=58.6
Q ss_pred ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHH
Q psy10250 249 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHK 328 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~ 328 (387)
+.+...++++++++... .++-+-+ + ..+ ...++.+.++|+|+|--.++.+. ++ .+.+.|+.+++
T Consensus 79 s~e~~~~~I~~vk~~~~--~pvga~i--g-~~~----~e~a~~l~eaGad~I~ld~a~G~----~~---~~~~~i~~i~~ 142 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGG--LRVGAAI--G-VNE----IERAKLLVEAGVDVIVLDSAHGH----SL---NIIRTLKEIKS 142 (361)
T ss_dssp CHHHHHHHHHHHHHTTC--CCCEEEE--C-TTC----HHHHHHHHHTTCSEEEECCSCCS----BH---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccC--ceEEEEe--C-CCH----HHHHHHHHHcCcCeEEEeCCCCC----cH---HHHHHHHHHHH
Confidence 56777888888886543 2333333 2 212 34567788999999975444421 12 12345666666
Q ss_pred HcCCCceEeEe-ccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 329 LSGKKIGLKPA-GGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 329 ~~~~~~gIKas-GGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
.. ++++. |++.|.++|..++ .+|+|++.
T Consensus 143 ~~----~~~Vivg~v~t~e~A~~l~-----~aGaD~I~ 171 (361)
T 3khj_A 143 KM----NIDVIVGNVVTEEATKELI-----ENGADGIK 171 (361)
T ss_dssp HC----CCEEEEEEECSHHHHHHHH-----HTTCSEEE
T ss_pred hc----CCcEEEccCCCHHHHHHHH-----HcCcCEEE
Confidence 54 34443 7899999999999 59998764
No 289
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=79.75 E-value=4.2 Score=38.21 Aligned_cols=108 Identities=8% Similarity=-0.061 Sum_probs=65.6
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCc------------------cHHHHHHHhhhcCCCCCceEEEEe
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPA------------------RVVDVIKVLDRENARDDVKVASVA 208 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~------------------~v~~a~~~L~~~~~~~~v~v~tVv 208 (387)
++.+.++.+. ++||.+|=+.+. .+...++.++. .+++++++-
T Consensus 37 ~l~~~l~~aa----------------~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~----~GL~i~~~~ 96 (305)
T 3obe_A 37 DMPNGLNRLA----------------KAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDD----AGLRISSSH 96 (305)
T ss_dssp THHHHHHHHH----------------HHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHH----TTCEEEEEB
T ss_pred CHHHHHHHHH----------------HcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHH----CCCeEEEee
Confidence 4666677776 568888877754 56677888875 689987662
Q ss_pred cCCCCCCCCH-------HHHHHHHHHHHHCCCCeeeeecCchh--hhcCChhHHHHHHHHHHHHhCCCcceEEEEeec
Q psy10250 209 AGFPSGQYLL-------ETRLHEIELLAKQKVDEVDIVIQRSL--VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG 277 (387)
Q Consensus 209 igFP~G~~~~-------e~K~~Ea~~Ai~~GAdEID~Vin~~~--lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~ 277 (387)
.+||.+.... +.=...++.|.+.|++-|=+ .... .....|+.+.+-++++.+.+.. .-+++-+|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lEn~ 171 (305)
T 3obe_A 97 LTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQ--PSLPRIENEDDAKVVSEIFNRAGEITKK-AGILWGYHNH 171 (305)
T ss_dssp CCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE--CCCCCCSSHHHHHHHHHHHHHHHHHHHT-TTCEEEEECC
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe--CCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCCEEEEecC
Confidence 2333331111 11223356677789997643 2110 1112466666777777777754 4589999985
No 290
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=79.61 E-value=32 Score=33.80 Aligned_cols=158 Identities=13% Similarity=0.055 Sum_probs=99.2
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----------hcCC-------hhHHHHHHHHHH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----------LNNQ-------WPELFSEVKQMK 261 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----------k~g~-------~~~v~~Ei~~v~ 261 (387)
..+++-+.+ + ..+.+.-..+++.+++.|.+-+-+=+-.... ..|. .+...+=+++|+
T Consensus 121 ~~v~~y~~~-~----~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR 195 (401)
T 3sbf_A 121 DAIPVYTHA-T----SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLR 195 (401)
T ss_dssp SSEEEEEEE-E----ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEeC-C----CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 356654442 2 3567888889999999999988764321100 0010 123334467788
Q ss_pred HHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEecc
Q psy10250 262 EKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 262 ~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGG 341 (387)
+++++ -+.+++....=-+.++-.+.++...+.|.+||--+.-- ..++ ..+.+++. -.+.|=+-+.
T Consensus 196 ~a~G~--d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~----~~~~-------~~~~l~~~--~~iPIa~dE~ 260 (401)
T 3sbf_A 196 EKYGN--QFHILHDVHERLFPNQAIQFAKEVEQYKPYFIEDILPP----NQTE-------WLDNIRSQ--SSVSLGLGEL 260 (401)
T ss_dssp HHHTT--SSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCT----TCGG-------GHHHHHTT--CCCCEEECTT
T ss_pred HHcCC--CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCh----hHHH-------HHHHHHhh--CCCCEEeCCc
Confidence 88875 35667776433266777777888888999999865421 1222 33444433 2456666667
Q ss_pred CCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 342 ISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 342 Irt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+.+..++..++. .-+++.++++..|+|. +.++++..
T Consensus 261 ~~~~~~~~~~i~----~~~~d~v~~k~~~~GGit~~~kia~ 297 (401)
T 3sbf_A 261 FNNPEEWKSLIA----NRRIDFIRCHVSQIGGITPALKLGH 297 (401)
T ss_dssp CCSHHHHHHHHH----TTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred cCCHHHHHHHHh----cCCCCEEecCccccCCHHHHHHHHH
Confidence 999999999995 3347888999999964 55555544
No 291
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=78.97 E-value=22 Score=34.22 Aligned_cols=137 Identities=10% Similarity=0.035 Sum_probs=80.5
Q ss_pred HHHHHHHC----CCCeeeeecCchhhh-----cCChhHHHHHHHHHHHHhCC-CcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 224 EIELLAKQ----KVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 224 Ea~~Ai~~----GAdEID~Vin~~~lk-----~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
.++.|++. |+++|.+++..+.+. ....++..+.+..+++.+.. +..+-+=.|...-.+++.+.+.++.+.
T Consensus 82 ~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~ 161 (325)
T 3eeg_A 82 DINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVI 161 (325)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHH
Confidence 34455555 999999987766553 23456777777777777654 223333334444446788889999999
Q ss_pred HcCCCEEE--cCCCCCCCCCChhhhHhHHHHHHHHHHHcCC----CceEeEe--ccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 294 FAGSDFIK--TSTGKEKTNATIPAGIIMCSAIKHFHKLSGK----KIGLKPA--GGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 294 ~aGaDfVK--TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~----~~gIKas--GGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
++|+|.|- -++| .++|..+..+++. +++.+++ .+++-.= -|-- ...++.-+ ++|+++++
T Consensus 162 ~~G~~~i~l~DT~G----~~~P~~v~~lv~~---l~~~~~~~~~~~i~~H~Hnd~GlA-~AN~laA~-----~aGa~~vd 228 (325)
T 3eeg_A 162 EAGADVVNIPDTTG----YMLPWQYGERIKY---LMDNVSNIDKAILSAHCHNDLGLA-TANSLAAL-----QNGARQVE 228 (325)
T ss_dssp HHTCSEEECCBSSS----CCCHHHHHHHHHH---HHHHCSCGGGSEEEECBCCTTSCH-HHHHHHHH-----HHTCCEEE
T ss_pred hcCCCEEEecCccC----CcCHHHHHHHHHH---HHHhCCCCCceEEEEEeCCCCCHH-HHHHHHHH-----HhCCCEEE
Confidence 99999764 3445 3678777666544 4555653 2333321 1111 12222223 58997766
Q ss_pred CCcceeec
Q psy10250 366 KDLFRIGA 373 (387)
Q Consensus 366 ~~~~RIGt 373 (387)
....=+|-
T Consensus 229 ~tv~GlGe 236 (325)
T 3eeg_A 229 CTINGIGE 236 (325)
T ss_dssp EBGGGCCS
T ss_pred Eecccccc
Confidence 55555554
No 292
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=78.29 E-value=19 Score=32.30 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=62.9
Q ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCC
Q psy10250 202 VKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 281 (387)
Q Consensus 202 v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t 281 (387)
.++..++ -...... =+.-++.+++-|++-|.+-. ++-+. .+.++.+++ ++ +.+-.-| .| +
T Consensus 13 ~~ii~vi-~~~~~~~----~~~~~~~l~~gGv~~iel~~-----k~~~~---~~~i~~~~~--~~---~~~gag~-vl-~ 72 (207)
T 2yw3_A 13 SRLLPLL-TVRGGED----LLGLARVLEEEGVGALEITL-----RTEKG---LEALKALRK--SG---LLLGAGT-VR-S 72 (207)
T ss_dssp HCEEEEE-CCCSCCC----HHHHHHHHHHTTCCEEEEEC-----SSTHH---HHHHHHHTT--SS---CEEEEES-CC-S
T ss_pred CCEEEEE-eCCCHHH----HHHHHHHHHHcCCCEEEEeC-----CChHH---HHHHHHHhC--CC---CEEEeCe-Ee-e
Confidence 3456663 4332222 23446677888988777653 22222 344444444 32 2222333 44 4
Q ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 282 SENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 282 ~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
.++ .++|+++|||||-++ ++ +++ .++. .+..+.. ..=|+.|.+++..-. ++|+
T Consensus 73 ~d~----~~~A~~~GAd~v~~~-~~-----d~~-------v~~~-~~~~g~~----~i~G~~t~~e~~~A~-----~~Ga 125 (207)
T 2yw3_A 73 PKE----AEAALEAGAAFLVSP-GL-----LEE-------VAAL-AQARGVP----YLPGVLTPTEVERAL-----ALGL 125 (207)
T ss_dssp HHH----HHHHHHHTCSEEEES-SC-----CHH-------HHHH-HHHHTCC----EEEEECSHHHHHHHH-----HTTC
T ss_pred HHH----HHHHHHcCCCEEEcC-CC-----CHH-------HHHH-HHHhCCC----EEecCCCHHHHHHHH-----HCCC
Confidence 443 477899999999644 33 232 1122 2223322 222599999998887 5899
Q ss_pred Ccc
Q psy10250 362 DWL 364 (387)
Q Consensus 362 ~w~ 364 (387)
|++
T Consensus 126 d~v 128 (207)
T 2yw3_A 126 SAL 128 (207)
T ss_dssp CEE
T ss_pred CEE
Confidence 765
No 293
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=78.23 E-value=31 Score=32.62 Aligned_cols=123 Identities=12% Similarity=0.117 Sum_probs=71.4
Q ss_pred CCCCCHHHHHHHHHHHHH-CCCCeeeeecCchhhhcCChhHHHHHHHH----HHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 213 SGQYLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQ----MKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~-~GAdEID~Vin~~~lk~g~~~~v~~Ei~~----v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.|..+.+.-+.-++.|-+ .+-.. +| -+. --+|..+...|+.. ...+..+ -++||- |- +++ . .
T Consensus 81 ag~~ta~eAv~~a~lare~~~~~~--~i-KlE--v~~d~~~llpD~~~tv~aa~~L~~~--Gf~Vlp---y~-~dd-~-~ 147 (265)
T 1wv2_A 81 AGCYDAVEAVRTCRLARELLDGHN--LV-KLE--VLADQKTLFPNVVETLKAAEQLVKD--GFDVMV---YT-SDD-P-I 147 (265)
T ss_dssp TTCCSHHHHHHHHHHHHTTTTSCC--EE-EEC--CBSCTTTCCBCHHHHHHHHHHHHTT--TCEEEE---EE-CSC-H-H
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCC--eE-EEE--eecCccccCcCHHHHHHHHHHHHHC--CCEEEE---Ee-CCC-H-H
Confidence 688888888888898888 54332 21 100 01233333333333 3333333 367773 12 122 1 3
Q ss_pred HHHHHHHcCCCEEEc-C--CCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 288 ASMTAMFAGSDFIKT-S--TGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 288 a~~ia~~aGaDfVKT-S--TGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
.|+...++|+++|=- + -|-+.+-.+++ -|+.+++. .++.|=+.|||.|.+||...+ ++|++
T Consensus 148 ~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~-------lI~~I~e~--~~vPVI~eGGI~TPsDAa~Am-----eLGAd 211 (265)
T 1wv2_A 148 IARQLAEIGCIAVMPLAGLIGSGLGICNPY-------NLRIILEE--AKVPVLVDAGVGTASDAAIAM-----ELGCE 211 (265)
T ss_dssp HHHHHHHSCCSEEEECSSSTTCCCCCSCHH-------HHHHHHHH--CSSCBEEESCCCSHHHHHHHH-----HHTCS
T ss_pred HHHHHHHhCCCEEEeCCccCCCCCCcCCHH-------HHHHHHhc--CCCCEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 567788999999943 1 12111113443 44555553 457777899999999999999 58984
No 294
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=77.95 E-value=8.9 Score=37.48 Aligned_cols=155 Identities=15% Similarity=0.103 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCCeeeeecchhHHh-----------cCCh--------hHHHHHHHHHHHHcccCccE--EEEEec----c
Q psy10250 14 HEIELLAKQKVDEVDIVIQRSLVL-----------NNQW--------PELFSEVKQMKEKCEEKIHM--KTILAV----G 68 (387)
Q Consensus 14 ~E~~~a~~~GA~EiD~Vin~~~lk-----------~g~~--------~~v~~ei~~v~~~~~~~~~~--KvIlEt----~ 68 (387)
..|+.|.+.|.|-|++=.--|+|. ...| ..+.+=+++|+++++.+.+| |+=..- +
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 346788889999999875444332 1112 34455566777666544333 443321 1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccC-C-CCCCHH
Q psy10250 69 ELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTL-S-GDDTEA 146 (387)
Q Consensus 69 ~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L-~-~~~T~~ 146 (387)
.+ +.++....++...++|+|||--|.|........+....+ +..+++++.+..+..+. . .-.|.+
T Consensus 242 ~~-~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~------------~~~~~~~ir~~~~iPVi~~GgI~s~e 308 (363)
T 3l5l_A 242 EQ-TLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAF------------MGPIAERVRREAKLPVTSAWGFGTPQ 308 (363)
T ss_dssp HH-HHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTT------------THHHHHHHHHHHTCCEEECSSTTSHH
T ss_pred CC-CHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcch------------hHHHHHHHHHHcCCcEEEeCCCCCHH
Confidence 12 346677788888999999999887643221111111111 12233333333343332 2 224788
Q ss_pred HHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhh
Q psy10250 147 VVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLD 194 (387)
Q Consensus 147 ~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~ 194 (387)
+.++++++-.-.+ . .++ ++..-+|.|+..+++.|.
T Consensus 309 ~a~~~l~~G~aD~-------V-----~iG-R~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 309 LAEAALQANQLDL-------V-----SVG-RAHLADPHWAYFAAKELG 343 (363)
T ss_dssp HHHHHHHTTSCSE-------E-----ECC-HHHHHCTTHHHHHHHHTT
T ss_pred HHHHHHHCCCccE-------E-----Eec-HHHHhCchHHHHHHHHcC
Confidence 8888876642000 0 011 112237989988888775
No 295
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=77.95 E-value=6.1 Score=39.98 Aligned_cols=71 Identities=20% Similarity=0.277 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEe
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIK 92 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvK 92 (387)
...++++++.|+|-+.+-.+ .|+.....+.++.+++.+++ +.||+..+ + +.++. +.+.++|+|||+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~-----~G~~~~~~e~i~~i~~~~p~---~pvi~g~~-~-t~e~a----~~l~~~G~d~I~ 304 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA-----HGHSRRVIETLEMIKADYPD---LPVVAGNV-A-TPEGT----EALIKAGADAVK 304 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS-----CCSSHHHHHHHHHHHHHCTT---SCEEEEEE-C-SHHHH----HHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCEEEEEec-----CCchHHHHHHHHHHHHHCCC---ceEEeCCc-C-CHHHH----HHHHHcCCCEEE
Confidence 35788899999999776444 36677788889999887753 34566543 3 55554 455789999999
Q ss_pred cCCCC
Q psy10250 93 TSTGK 97 (387)
Q Consensus 93 TSTG~ 97 (387)
.|.|.
T Consensus 305 v~~~~ 309 (494)
T 1vrd_A 305 VGVGP 309 (494)
T ss_dssp ECSSC
T ss_pred EcCCC
Confidence 97664
No 296
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=77.81 E-value=37 Score=30.90 Aligned_cols=148 Identities=10% Similarity=0.025 Sum_probs=79.2
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeec--
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVG-- 277 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~-- 277 (387)
..+++.-.-.||. ..+.+..+ +.+.+.|.+-|++..+...-....++.-.+++.++++.+.. .-+++. +-.+
T Consensus 16 ~~~~gi~~~~~~~-~~~~~~~l---~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~ 90 (295)
T 3cqj_A 16 QIPLGIYEKALPA-GECWLERL---QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVE-TGVRVPSMCLSAH 90 (295)
T ss_dssp CCCEEEEGGGSCC-CSCHHHHH---HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHH-HCCEEEEEEEGGG
T ss_pred cccceeeeecCCC-CCCHHHHH---HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHH-cCCeEEEEecCcc
Confidence 4555444224442 34555444 44567899999998654311000111113445555555543 224543 2222
Q ss_pred --c-CCC-h--------HHHHHHHHHHHHcCCCEEEcCCCCCCC-CCChhhhHhHHHHHHHHH---HHcCCCceEeEecc
Q psy10250 278 --E-LKT-S--------ENIYCASMTAMFAGSDFIKTSTGKEKT-NATIPAGIIMCSAIKHFH---KLSGKKIGLKPAGG 341 (387)
Q Consensus 278 --~-L~t-~--------e~i~~a~~ia~~aGaDfVKTSTGf~~~-gat~~~~~~m~~~v~~~~---~~~~~~~gIKasGG 341 (387)
+ |.+ + +.+.+++++|.+.|+++|....+.... ..+.+....+.+.++.+. +..|-++.+-.-.+
T Consensus 91 ~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 91 RRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDY 170 (295)
T ss_dssp GTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCC
Confidence 1 322 1 346678899999999999876432211 222333333444444433 33455666666555
Q ss_pred --CCCHHHHHHHHH
Q psy10250 342 --ISTFEDSVRWIY 353 (387)
Q Consensus 342 --Irt~~~a~~~i~ 353 (387)
+.|.+++..+++
T Consensus 171 ~~~~~~~~~~~l~~ 184 (295)
T 3cqj_A 171 PLMNSISKALGYAH 184 (295)
T ss_dssp GGGCSHHHHHHHHH
T ss_pred cccCCHHHHHHHHH
Confidence 689999999986
No 297
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=77.73 E-value=11 Score=33.67 Aligned_cols=117 Identities=9% Similarity=0.065 Sum_probs=69.5
Q ss_pred CCCeEEEEEC---CccHHHHHHHhhhcCCCCCceEEEEecCCCCCC--------CC--------HHHHHHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVY---PARVVDVIKVLDRENARDDVKVASVAAGFPSGQ--------YL--------LETRLHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~--------~~--------~e~K~~Ea~~Ai~~GA 233 (387)
++||.+|-+. +......++.+++ .++++.++ ..|.+. .+ .+.=...++.|.+.|+
T Consensus 26 ~~G~~~vEl~~~~~~~~~~~~~~l~~----~gl~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 99 (260)
T 1k77_A 26 KAGFDAVEFLFPYNYSTLQIQKQLEQ----NHLTLALF--NTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNC 99 (260)
T ss_dssp HHTCSEEECSCCTTSCHHHHHHHHHH----TTCEEEEE--ECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCCEEEecCCCCCCHHHHHHHHHH----cCCceEEE--ecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCC
Confidence 3466666664 3456777888875 68998776 444321 11 1222344667778899
Q ss_pred CeeeeecCchhhhc-----CChhHHHHHHHHHHHHhCCCcceEEEEeec--------cCCChHHHHHHHHHHHHcCCCEE
Q psy10250 234 DEVDIVIQRSLVLN-----NQWPELFSEVKQMKEKCGEKIHMKTILAVG--------ELKTSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 234 dEID~Vin~~~lk~-----g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~--------~L~t~e~i~~a~~ia~~aGaDfV 300 (387)
+-| |+..|.... ..|+.+.+-++++.+.+.. .-+++-+|+. .+.+.++ +.+++.+.|.+.+
T Consensus 100 ~~v--~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~~E~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~ 173 (260)
T 1k77_A 100 EQV--HVMAGVVPAGEDAERYRAVFIDNIRYAADRFAP-HGKRILVEALSPGVKPHYLFSSQYQ---ALAIVEEVARDNV 173 (260)
T ss_dssp SEE--ECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGG-GTCEEEECCCCTTTSTTBSCCSHHH---HHHHHHHHCCTTE
T ss_pred CEE--EECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEeCCccCCCcCccCCHHH---HHHHHHHhCCCCE
Confidence 875 444443321 1345566677777777654 3589999985 3555444 4455555666555
Q ss_pred E
Q psy10250 301 K 301 (387)
Q Consensus 301 K 301 (387)
+
T Consensus 174 g 174 (260)
T 1k77_A 174 F 174 (260)
T ss_dssp E
T ss_pred E
Confidence 4
No 298
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=77.65 E-value=56 Score=32.00 Aligned_cols=143 Identities=11% Similarity=0.060 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHHHC---CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQ---KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~---GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
.+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++|++++++ -+.+.+....--+.++-.+.++..
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~-----~~~~~d~~~v~avR~a~G~--~~~l~vDaN~~~~~~~A~~~~~~l 242 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGR-----DDPAVDIETAEAVWDAVGR--DTALMVDFNQGLDMAEAMHRTRQI 242 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCC-----SSHHHHHHHHHHHHHHHCT--TSEEEEECTTCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCC-----CCHHHHHHHHHHHHHHhCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence 5667778889999999 99887764321 2345556667888888875 356677754333667766777878
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
.+.|.+||--+.-- ..+ +..+.+++.+ .+.|=+-.-+.+..++..++. .-.++.++++..|+|
T Consensus 243 ~~~~i~~iEqP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~ik~~~~G 305 (390)
T 3ugv_A 243 DDLGLEWIEEPVVY----DNF-------DGYAQLRHDL--KTPLMIGENFYGPREMHQALQ----AGACDLVMPDFMRIG 305 (390)
T ss_dssp TTSCCSEEECCSCT----TCH-------HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----TTCCSEECCBHHHHT
T ss_pred HhhCCCEEECCCCc----ccH-------HHHHHHHHhc--CCCEEeCCCcCCHHHHHHHHH----cCCCCEEEeCccccC
Confidence 88899999865421 122 3445555543 356666667999999999994 234788899999996
Q ss_pred c-cchHHHHHH
Q psy10250 373 A-SSLLNNILQ 382 (387)
Q Consensus 373 t-Ss~~~il~~ 382 (387)
. +.++++..-
T Consensus 306 Git~~~~i~~~ 316 (390)
T 3ugv_A 306 GVSGWMRAAGV 316 (390)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 4 556665543
No 299
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=77.63 E-value=29 Score=31.32 Aligned_cols=130 Identities=8% Similarity=0.081 Sum_probs=75.6
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCch-hhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC--C-------hHHH
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK--T-------SENI 285 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~-~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~--t-------~e~i 285 (387)
.+.+. -++.+.+.|.+-|++-.... .+ .+.-..++.++++.+.. .-+++..=++++. . .+.+
T Consensus 15 ~~~~~---~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (286)
T 3dx5_A 15 ISFTD---IVQFAYENGFEGIELWGTHAQNL----YMQEYETTERELNCLKD-KTLEITMISDYLDISLSADFEKTIEKC 86 (286)
T ss_dssp CCHHH---HHHHHHHTTCCEEEEEHHHHHHH----HHHCHHHHHHHHHHTGG-GTCCEEEEECCCCCSTTSCHHHHHHHH
T ss_pred CCHHH---HHHHHHHhCCCEEEEcccccccc----cccCHHHHHHHHHHHHH-cCCeEEEEecCCCCCCchhHHHHHHHH
Confidence 45554 35566678999999943211 01 11113567777777654 2344443344431 1 1356
Q ss_pred HHHHHHHHHcCCCEEEcCCCCCCCC-CChhhhHhHHHHHHHHHHH---cCCCceEeEecc--CCCHHHHHHHHH
Q psy10250 286 YCASMTAMFAGSDFIKTSTGKEKTN-ATIPAGIIMCSAIKHFHKL---SGKKIGLKPAGG--ISTFEDSVRWIY 353 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTGf~~~g-at~~~~~~m~~~v~~~~~~---~~~~~gIKasGG--Irt~~~a~~~i~ 353 (387)
.++.++|...|+.+|...+|+.+.+ .+.+....+.+.++.+.+. .|-++.+-.-.+ +.|.+++..++.
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~ 160 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLG 160 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHH
Confidence 6788999999999999999975433 2333334444444444433 344455554332 478899999986
No 300
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=77.45 E-value=5.9 Score=35.92 Aligned_cols=133 Identities=10% Similarity=-0.038 Sum_probs=78.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCCh-----H
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS-----E 283 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~-----e 283 (387)
.+.=++.-+... ...++.+.+.|||-+=+=.+.|. +-|+...+.+.+ . +..+ ..|++. +
T Consensus 63 lD~K~~DI~nT~-~~~v~~~~~~GaD~vTvh~~~G~----------~~l~~~~~~~~~-~-~~~V---~~lts~~~~l~~ 126 (213)
T 1vqt_A 63 LDLKFCDIPSTV-ERSIKSWDHPAIIGFTVHSCAGY----------ESVERALSATDK-H-VFVV---VKLTSMEGSLED 126 (213)
T ss_dssp EEEEECSCHHHH-HHHHHHHCCTTEEEEEEEGGGCH----------HHHHHHHHHCSS-E-EEEE---CCCTTSCCCHHH
T ss_pred EEeecccCchHH-HHHHHHHHHCCCCEEEEeccCCH----------HHHHHHHHhcCC-C-eEEE---EEeCCCCHHHHH
Confidence 366666554444 34577888899887766666552 135555555541 1 2222 223221 5
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHH---H------HHHHHHH
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFE---D------SVRWIYL 354 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~---~------a~~~i~l 354 (387)
.+.+.++. .+.|+|||.+. + .++.+++..+.. =..||||--. | ..+ +
T Consensus 127 ~v~~~a~~-~e~G~dvV~~~----------~-------~~~~ir~~~~~~---~v~pGI~~~~~~~dq~rv~t~~~-i-- 182 (213)
T 1vqt_A 127 YMDRIEKL-NKLGCDFVLPG----------P-------WAKALREKIKGK---ILVPGIRMEVKADDQKDVVTLEE-M-- 182 (213)
T ss_dssp HHHHHHHH-HHHTCEEECCH----------H-------HHHHHTTTCCSC---EEECCBC---------CCBCHHH-H--
T ss_pred HHHHHHHH-hcCCCEEEEcH----------H-------HHHHHHHHCCCC---EEECCCCCCCCccchhhcCCHHH-H--
Confidence 67777888 99999977522 1 344555555543 4567886432 1 345 5
Q ss_pred HHHhcCCCccCCCcceeeccchHHHHHHHH
Q psy10250 355 VLIMLGPDWLNKDLFRIGASSLLNNILQEL 384 (387)
Q Consensus 355 ~~~~~Ga~w~~~~~~RIGtSs~~~il~~~~ 384 (387)
.+|++++.-|+.-+++++..+.+++-.
T Consensus 183 ---~aGad~iVvGR~I~~a~dP~~aa~~i~ 209 (213)
T 1vqt_A 183 ---KGIANFAVLGREIYLSENPREKIKRIK 209 (213)
T ss_dssp ---TTTCSEEEESHHHHTSSCHHHHHHHHT
T ss_pred ---HCCCCEEEEChhhcCCCCHHHHHHHHH
Confidence 689998888877777777666655543
No 301
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=77.43 E-value=49 Score=32.66 Aligned_cols=141 Identities=9% Similarity=0.069 Sum_probs=92.1
Q ss_pred HHHHHHHHHCCCCeeee-ecCchhhhcCC------hhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 222 LHEIELLAKQKVDEVDI-VIQRSLVLNNQ------WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~-Vin~~~lk~g~------~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
...++.+++.|.+-+=+ .+.....|-|. .+.-.+=+++|++++++ -+.+++...---+.++-.+.++...+
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~--d~~l~vDaN~~~~~~~A~~~~~~L~~ 238 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQ--RIEIMCELHSLWGTHAAARICNALAD 238 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTT--SSEEEEECTTCBCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCC--CceEEEECCCCCCHHHHHHHHHHHHh
Confidence 34567889999998876 33222224442 23444556778888875 25667776433367777777787888
Q ss_pred cCCCEEEcC-CCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcceee
Q psy10250 295 AGSDFIKTS-TGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRIG 372 (387)
Q Consensus 295 aGaDfVKTS-TGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RIG 372 (387)
.|.+||--+ ..- -.+ +..+.+++.+ .+.|-+-+.+.+..++..++. .| ++.++++..|+|
T Consensus 239 ~~i~~iEqP~~~~----~~~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~-----~~~~d~v~~k~~~~G 300 (410)
T 3dip_A 239 YGVLWVEDPIAKM----DNI-------PAVADLRRQT--RAPICGGENLAGTRRFHEMLC-----ADAIDFVMLDLTWCG 300 (410)
T ss_dssp GTCSEEECCBSCT----TCH-------HHHHHHHHHH--CCCEEECTTCCSHHHHHHHHH-----TTCCSEEEECTTTSS
T ss_pred cCCCEEECCCCCc----ccH-------HHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH-----cCCCCeEeecccccC
Confidence 899999865 421 122 2445555544 356666667999999999994 54 677889999996
Q ss_pred c-cchHHHHHH
Q psy10250 373 A-SSLLNNILQ 382 (387)
Q Consensus 373 t-Ss~~~il~~ 382 (387)
. +.++++..-
T Consensus 301 Git~~~~ia~~ 311 (410)
T 3dip_A 301 GLSEGRKIAAL 311 (410)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 4 666665543
No 302
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=77.07 E-value=5.7 Score=37.30 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=56.5
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc-CCCEEEcC
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-GSDFIKTS 303 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a-GaDfVKTS 303 (387)
++.|.+.|+|-+ +++++. + +|...++++|.. .-++.|.=..--++++.+. +++..+ |-=|.-++
T Consensus 109 ~~~~~~aGvdG~-IipDLP------~----eE~~~~~~~~~~-~Gl~~I~lvaP~t~~eRi~---~ia~~a~gFiY~Vs~ 173 (252)
T 3tha_A 109 VKKAKSLGICAL-IVPELS------F----EESDDLIKECER-YNIALITLVSVTTPKERVK---KLVKHAKGFIYLLAS 173 (252)
T ss_dssp HHHHHHTTEEEE-ECTTCC------G----GGCHHHHHHHHH-TTCEECEEEETTSCHHHHH---HHHTTCCSCEEEECC
T ss_pred HHHHHHcCCCEE-EeCCCC------H----HHHHHHHHHHHH-cCCeEEEEeCCCCcHHHHH---HHHHhCCCeEEEEec
Confidence 566777787776 334443 1 234444444432 1245554333232445443 333332 44456555
Q ss_pred CCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 304 TGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 304 TGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
+|- .|+.......+.+-++.+++.+ ++.|=+-+||+|.+|+..+.
T Consensus 174 ~Gv--TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~ 218 (252)
T 3tha_A 174 IGI--TGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMR 218 (252)
T ss_dssp SCS--SSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHT
T ss_pred CCC--CCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHH
Confidence 553 3333322222234455555543 46677789999999999886
No 303
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=77.05 E-value=49 Score=31.06 Aligned_cols=134 Identities=11% Similarity=0.008 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .++||.=++-.++ ++-.+.++.|.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~la~~A~ 92 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNAT-HEAVHLTAHAK 92 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCH-HHHHHHHHHHH
Confidence 55566666778899999999986544444444444455555556666666654 5789999999866 44567788899
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCCceEeEeccCCCHHH
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKKIGLKPAGGISTFED 347 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~~gIKasGGIrt~~~ 347 (387)
++|+|.+=-.+=|... .|.+....-+ +.+..+.+..++=+|||-|.| +..+
T Consensus 93 ~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~g--d~~~ 169 (294)
T 2ehh_A 93 EVGADGALVVVPYYNK-PTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKESTP--NMDR 169 (294)
T ss_dssp HTTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCS--CHHH
T ss_pred hcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCCC--CHHH
Confidence 9999988665544221 2322222111 233334423577789999876 4666
Q ss_pred HHHHHH
Q psy10250 348 SVRWIY 353 (387)
Q Consensus 348 a~~~i~ 353 (387)
..+++.
T Consensus 170 ~~~~~~ 175 (294)
T 2ehh_A 170 ISEIVK 175 (294)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 304
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=77.05 E-value=14 Score=34.23 Aligned_cols=129 Identities=9% Similarity=0.077 Sum_probs=72.7
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhC---CCc-ceEEEEeeccCCChHHHHHHHHHHHHcCC
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG---EKI-HMKTILAVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~---~~~-~lKvIlEt~~L~t~e~i~~a~~ia~~aGa 297 (387)
...++.+.+.|||-|=+- ... .+...+-++.+++.-. +.. -+|+.+..+-= |+.+..+ ....++
T Consensus 82 ~~~i~~~~~aGAd~itvH--~ea-----~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~-Tp~~~l~----~~l~~~ 149 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQ--LEQ-----YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPE-TPISELE----PYLDQI 149 (237)
T ss_dssp HHHHHHHHHTTCSEEEEE--TTC-----TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTT-SCGGGGT----TTTTTC
T ss_pred HHHHHHHHHcCCCEEEEe--cCC-----cccHHHHHHHHHhcccccccccCCceEEEEEeCC-ChHHHHH----HHhhcC
Confidence 568899999999875433 322 1223444444432100 000 35777766322 3222211 122489
Q ss_pred CEEEc---CCCCCCCCCChhhhHhHHHHHHHHHHHcCC---CceEeEeccCCCHHHHHHHHHHHHHh--cCCCccCCCcc
Q psy10250 298 DFIKT---STGKEKTNATIPAGIIMCSAIKHFHKLSGK---KIGLKPAGGISTFEDSVRWIYLVLIM--LGPDWLNKDLF 369 (387)
Q Consensus 298 DfVKT---STGf~~~gat~~~~~~m~~~v~~~~~~~~~---~~gIKasGGIrt~~~a~~~i~l~~~~--~Ga~w~~~~~~ 369 (387)
|||=- ..||+. .+. ...+++.|+.+++..+. .+.|=+-|||+ .+++..+. . +|++++-.|..
T Consensus 150 D~vlvMsv~pgfgg--q~f--~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~-----~~~aGad~~VvGSa 219 (237)
T 3cu2_A 150 DVIQLLTLDPRNGT--KYP--SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFK-----QGTHQIDWLVSGSA 219 (237)
T ss_dssp SEEEEESEETTTTE--ECC--HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHH-----HSSSCCCCEEECGG
T ss_pred ceeeeeeeccCcCC--eec--ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHH-----HhCCCCcEEEEeeH
Confidence 99933 567753 232 22345667777766543 57788899998 68888888 8 89986444433
Q ss_pred eee
Q psy10250 370 RIG 372 (387)
Q Consensus 370 RIG 372 (387)
-++
T Consensus 220 If~ 222 (237)
T 3cu2_A 220 LFS 222 (237)
T ss_dssp GGS
T ss_pred HhC
Confidence 333
No 305
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=77.01 E-value=49 Score=31.00 Aligned_cols=90 Identities=16% Similarity=0.068 Sum_probs=64.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.++ ++-.+.++.|.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~la~~a~ 92 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCT-EEAIELSVFAE 92 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCH-HHHHHHHHHHH
Confidence 55666777778899999999986555445544444455555556666776654 4789999999866 45667788999
Q ss_pred HcCCCEEEcCCCC
Q psy10250 294 FAGSDFIKTSTGK 306 (387)
Q Consensus 294 ~aGaDfVKTSTGf 306 (387)
++|+|.+=-.+=|
T Consensus 93 ~~Gadavlv~~P~ 105 (289)
T 2yxg_A 93 DVGADAVLSITPY 105 (289)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 9999987665544
No 306
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=76.93 E-value=25 Score=36.36 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=37.7
Q ss_pred ChHHHHHHHHHHHHcC---CCEEEcCCCCCC---CCCC-hhhhHhHHHHHHHHHHHc----CCCceEeEeccCCCHHHHH
Q psy10250 281 TSENIYCASMTAMFAG---SDFIKTSTGKEK---TNAT-IPAGIIMCSAIKHFHKLS----GKKIGLKPAGGISTFEDSV 349 (387)
Q Consensus 281 t~e~i~~a~~ia~~aG---aDfVKTSTGf~~---~gat-~~~~~~m~~~v~~~~~~~----~~~~gIKasGGIrt~~~a~ 349 (387)
+.++.. .|.+.| +|||..++=|.. .++. +. +-.+.++.+.+.. ..++.+=|-||| +.+++.
T Consensus 117 t~eea~----~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~---~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~ 188 (540)
T 3nl6_A 117 FPEEVD----ELSKMGPDMVDYIGVGTLFPTLTKKNPKKAP---MGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIE 188 (540)
T ss_dssp SHHHHH----HHHHTCC--CCEEEESCCSCCCCCC----CC---CHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHH
T ss_pred CHHHHH----HHHHcCCCCCCEEEEcCCCCCCCCCCcCCCC---CCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHH
Confidence 455554 356789 999998765522 1221 10 1113344444332 246889999999 778888
Q ss_pred HHH
Q psy10250 350 RWI 352 (387)
Q Consensus 350 ~~i 352 (387)
.++
T Consensus 189 ~v~ 191 (540)
T 3nl6_A 189 RVL 191 (540)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 307
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=76.61 E-value=29 Score=30.95 Aligned_cols=129 Identities=11% Similarity=0.025 Sum_probs=70.3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEE-EEeec-cCC--C---hHHH
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKT-ILAVG-ELK--T---SENI 285 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKv-IlEt~-~L~--t---~e~i 285 (387)
.+..+.+.. .+.+.+.|.+-|++......... ..+ .++.++++.+.. .-+++ -+-+. .++ + .+.+
T Consensus 16 ~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~-~~~---~~~~~~~~~~~~-~gl~~~~~~~~~~~~~~~~~~~~~~ 87 (272)
T 2q02_A 16 APGLSIEAF---FRLVKRLEFNKVELRNDMPSGSV-TDD---LNYNQVRNLAEK-YGLEIVTINAVYPFNQLTEEVVKKT 87 (272)
T ss_dssp CTTSCHHHH---HHHHHHTTCCEEEEETTSTTSST-TTT---CCHHHHHHHHHH-TTCEEEEEEEETTTTSCCHHHHHHH
T ss_pred cCCCCHHHH---HHHHHHcCCCEEEeecccccccc-ccc---cCHHHHHHHHHH-cCCeEEechhhhccCCcHHHHHHHH
Confidence 334455433 45566789999999754321000 011 233344444432 22455 23321 121 1 1456
Q ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhH-HHHHHHHHHH---cCCCceEeEe----ccCCCHHHHHHHHH
Q psy10250 286 YCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIM-CSAIKHFHKL---SGKKIGLKPA----GGISTFEDSVRWIY 353 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m-~~~v~~~~~~---~~~~~gIKas----GGIrt~~~a~~~i~ 353 (387)
.++.++|.+.|+++|.+.+|+... +....+ .+.++.+.+. .|-++.+-.- .-+.|.+++..+++
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~~----~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~ 159 (272)
T 2q02_A 88 EGLLRDAQGVGARALVLCPLNDGT----IVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIR 159 (272)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSB----CCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccCCCch----hHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHH
Confidence 678899999999999998886432 222233 3444444333 3445555543 24678999999986
No 308
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=76.53 E-value=53 Score=31.13 Aligned_cols=135 Identities=14% Similarity=0.033 Sum_probs=85.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.++ ++-.+.++.|.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st-~~ai~la~~A~ 104 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNST-EKTLKLVKQAE 104 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccH-HHHHHHHHHHH
Confidence 44456666777889999999986555455555544556656666667777664 4789999999866 44567788899
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHh--------------------------HHHHHHHHHHHcCCCceEeEeccCCCHHH
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGII--------------------------MCSAIKHFHKLSGKKIGLKPAGGISTFED 347 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~--------------------------m~~~v~~~~~~~~~~~gIKasGGIrt~~~ 347 (387)
++|+|.+=-.+=|... .|.+.... -.+.++.+.+..++=+|||-|.| +..+
T Consensus 105 ~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssg--d~~~ 181 (306)
T 1o5k_A 105 KLGANGVLVVTPYYNK-PTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEANP--DIDQ 181 (306)
T ss_dssp HHTCSEEEEECCCSSC-CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCC--CHHH
T ss_pred hcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCCC--CHHH
Confidence 9999987654443211 12221111 11334444423577789999876 5666
Q ss_pred HHHHHHH
Q psy10250 348 SVRWIYL 354 (387)
Q Consensus 348 a~~~i~l 354 (387)
..+++..
T Consensus 182 ~~~~~~~ 188 (306)
T 1o5k_A 182 IDRTVSL 188 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666653
No 309
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=76.43 E-value=53 Score=31.11 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=93.6
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+++ .+.||.=++-.
T Consensus 18 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~ 94 (304)
T 3l21_A 18 TLLTAMV-TPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTY 94 (304)
T ss_dssp SEEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCS
T ss_pred ceEEEEE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCC
Confidence 4544444 566 5688888888889999999999997444445544444455555566666776654 58999999988
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKK 333 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~ 333 (387)
++ ++..+.++.|.++|+|.+=-.+=|... .|.+....-+ +.+..+. ..++=
T Consensus 95 ~t-~~ai~la~~a~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-~~pnI 171 (304)
T 3l21_A 95 DT-AHSIRLAKACAAEGAHGLLVVTPYYSK-PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA-SHPNI 171 (304)
T ss_dssp CH-HHHHHHHHHHHHHTCSEEEEECCCSSC-CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH-TSTTE
T ss_pred CH-HHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh-cCCCE
Confidence 66 556677899999999988766544221 2322221111 2233333 34667
Q ss_pred ceEeEeccCCCHHHHHHHH
Q psy10250 334 IGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 334 ~gIKasGGIrt~~~a~~~i 352 (387)
+|||-|.| +..+..+++
T Consensus 172 vgiKdssg--d~~~~~~~~ 188 (304)
T 3l21_A 172 VGVXDAKA--DLHSGAQIM 188 (304)
T ss_dssp EEEEECSC--CHHHHHHHH
T ss_pred EEEECCCC--CHHHHHHHh
Confidence 89999876 566655554
No 310
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=76.33 E-value=40 Score=33.03 Aligned_cols=134 Identities=11% Similarity=0.022 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHcCCCeeeeecchh--HHh----cCChhHHHHHHHHHHHH-------cccCccEEEEEeccCCCCHHHHH
Q psy10250 11 TRLHEIELLAKQKVDEVDIVIQRS--LVL----NNQWPELFSEVKQMKEK-------CEEKIHMKTILAVGELKTSENIY 77 (387)
Q Consensus 11 ~K~~E~~~a~~~GA~EiD~Vin~~--~lk----~g~~~~v~~ei~~v~~~-------~~~~~~~KvIlEt~~L~~~e~i~ 77 (387)
.-..++-+.+..++|.||+ |+| ..+ -.+.+.+.+-+.+++++ ....+.+|+ .+.+ +++++.
T Consensus 164 ~dy~~~~~~~~~~ad~iel--NisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi---~p~~-~~~~~~ 237 (367)
T 3zwt_A 164 EDYAEGVRVLGPLADYLVV--NVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKI---APDL-TSQDKE 237 (367)
T ss_dssp HHHHHHHHHHGGGCSEEEE--ECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEE---CSCC-CHHHHH
T ss_pred HHHHHHHHHHhhhCCEEEE--ECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEe---CCCC-CHHHHH
Confidence 3344444555667898775 443 111 12345556666666654 222356676 3455 678899
Q ss_pred HHHHHHHHcCCCEEec-CCCCCCCCCCCc---ccccchhccccchhhhhhHHHHHHhhccc----ccccCCCCCCHHHHH
Q psy10250 78 YASMTAMFAGSDFIKT-STGKEKTNATIP---ADLTRQFEAVDLSRLKNKKSLLLKIIEFI----DLTTLSGDDTEAVVE 149 (387)
Q Consensus 78 ~a~~~a~~ag~dfvKT-STG~~~~gat~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~I----D~T~L~~~~T~~~i~ 149 (387)
..++.+.++|+|+|.- .|..+..+...+ ..... ++-.++.++ ...+.+++.+.+ -.-.-..-.|.+|+.
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gG-lSG~~i~p~--a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~ 314 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGG-LSGKPLRDL--STQTIREMYALTQGRVPIIGVGGVSSGQDAL 314 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSE-EEEGGGHHH--HHHHHHHHHHHTTTCSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCC-cCCcccchh--HHHHHHHHHHHcCCCceEEEECCCCCHHHHH
Confidence 9999999999999983 343221111000 00111 111122221 123444444444 233344556889998
Q ss_pred HHHH
Q psy10250 150 TLTL 153 (387)
Q Consensus 150 ~l~~ 153 (387)
++++
T Consensus 315 ~~l~ 318 (367)
T 3zwt_A 315 EKIR 318 (367)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 311
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=76.26 E-value=53 Score=31.09 Aligned_cols=139 Identities=11% Similarity=0.024 Sum_probs=87.8
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=...+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.++.+ -.+
T Consensus 24 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~-ai~ 100 (307)
T 3s5o_A 24 TPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK--NRLLLAGSGCESTQA-TVE 100 (307)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT--TSEEEEECCCSSHHH-HHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC--CCcEEEecCCCCHHH-HHH
Confidence 445 4577777777778999999999886444444444433445444555556665543 578999999886644 557
Q ss_pred HHHHHHHcCCCEEEcCCCCCCC-CCChhhhHhHH--------------------------HHHHHHHHHcCCCceEeEec
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKT-NATIPAGIIMC--------------------------SAIKHFHKLSGKKIGLKPAG 340 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~-gat~~~~~~m~--------------------------~~v~~~~~~~~~~~gIKasG 340 (387)
.++.|.++|+|.+=-.+=|... ..|.+....-+ +.+..+.+ .++=+|||-|.
T Consensus 101 la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIvgiKdss 179 (307)
T 3s5o_A 101 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ-HPNIVGMXDSG 179 (307)
T ss_dssp HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT-STTEEEEEECS
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc-CCCEEEEEcCC
Confidence 7899999999988765544221 23433222222 22333332 46779999987
Q ss_pred cCCCHHHHHHHHH
Q psy10250 341 GISTFEDSVRWIY 353 (387)
Q Consensus 341 GIrt~~~a~~~i~ 353 (387)
| +..+..+++.
T Consensus 180 g--d~~~~~~~~~ 190 (307)
T 3s5o_A 180 G--DVTRIGLIVH 190 (307)
T ss_dssp C--CHHHHHHHHH
T ss_pred C--CHHHHHHHHH
Confidence 6 6666666653
No 312
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=76.22 E-value=33 Score=34.07 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=99.9
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhh-----------hcCC-------hhHHHHHHHHHH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----------LNNQ-------WPELFSEVKQMK 261 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~l-----------k~g~-------~~~v~~Ei~~v~ 261 (387)
..+++-+.+ + ..+.+.-+.+++.+++.|.+-+-+=+-.... ..|. .+...+=+++|+
T Consensus 142 ~~v~~y~~~-~----~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR 216 (422)
T 3tji_A 142 DAIPAYSHA-S----GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALR 216 (422)
T ss_dssp SCEEEEEEE-E----ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEe-C----CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHH
Confidence 356654442 2 3567888889999999999988764321100 0111 122334467788
Q ss_pred HHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEecc
Q psy10250 262 EKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 262 ~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGG 341 (387)
+++++ -+.+.+....=-+.++-.+.++...+.|.+||--+.- +++. +..+.+++.+ .+.|=+-+.
T Consensus 217 ~avG~--d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~ 281 (422)
T 3tji_A 217 EKYGW--KLHILHDVHERLFPQQAVQLAKQLEPFQPYFIEDILP-------PQQS----AWLEQVRQQS--CVPLALGEL 281 (422)
T ss_dssp HHHCS--SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSC-------GGGG----GGHHHHHHHC--CCCEEECTT
T ss_pred HHcCC--CCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEECCCC-------hhhH----HHHHHHHhhC--CCCEEEeCC
Confidence 88875 3566777643336777777788888889999986542 1222 2334455543 466666667
Q ss_pred CCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 342 ISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 342 Irt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+.+..++..++. .-.++.++++..|+|. +.++++..
T Consensus 282 ~~~~~~~~~ll~----~ga~d~v~~k~~~~GGit~~~kia~ 318 (422)
T 3tji_A 282 FNNPAEWHDLIV----NRRIDFIRCHVSQIGGITPALKLAH 318 (422)
T ss_dssp CCSGGGTHHHHH----TTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred cCCHHHHHHHHh----cCCCCEEecCccccCCHHHHHHHHH
Confidence 999999999995 2347888999999964 55555543
No 313
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=76.21 E-value=17 Score=32.55 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=69.7
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE--EeeccCCC-h--------HHHHHHHHHH
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI--LAVGELKT-S--------ENIYCASMTA 292 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI--lEt~~L~t-~--------e~i~~a~~ia 292 (387)
..+.+.+.|.+-|++..+. + -..++.++++.+.. .-+++. --.+.+.+ + +.+.++.++|
T Consensus 23 ~l~~~~~~G~~~vEl~~~~--~-------~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a 92 (275)
T 3qc0_A 23 AVDICLKHGITAIAPWRDQ--V-------AAIGLGEAGRIVRA-NGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEA 92 (275)
T ss_dssp HHHHHHHTTCCEEECBHHH--H-------HHHCHHHHHHHHHH-HTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecccc--c-------cccCHHHHHHHHHH-cCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3456678899999986531 1 12334444444432 113332 11122322 1 4566788999
Q ss_pred HHcCCCEEEcCCCCCCCC-CCh-hhhHhHHHHHHHHH---HHcCCCceEeEe-c-------cCCCHHHHHHHHH
Q psy10250 293 MFAGSDFIKTSTGKEKTN-ATI-PAGIIMCSAIKHFH---KLSGKKIGLKPA-G-------GISTFEDSVRWIY 353 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~g-at~-~~~~~m~~~v~~~~---~~~~~~~gIKas-G-------GIrt~~~a~~~i~ 353 (387)
...|+++|...+|+.+.+ .+. +....+.+.++.+. +..|-++.+-.- + -+.|.+++..++.
T Consensus 93 ~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~ 166 (275)
T 3qc0_A 93 AELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICE 166 (275)
T ss_dssp HHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHH
T ss_pred HHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHH
Confidence 999999999999865432 232 23333444444443 334667777763 2 3689999999986
No 314
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=76.19 E-value=8.9 Score=36.65 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=46.0
Q ss_pred HcCCCeeeeecch-----hHHhcCChhHHHHHHHHHHHHc---------ccCccEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy10250 21 KQKVDEVDIVIQR-----SLVLNNQWPELFSEVKQMKEKC---------EEKIHMKTILAVGELKTSENIYYASMTAMFA 86 (387)
Q Consensus 21 ~~GA~EiD~Vin~-----~~lk~g~~~~v~~ei~~v~~~~---------~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~a 86 (387)
..|+|-|++=+.. ..... +.+.+.+-+++|++++ +-.+.+|+ ++.+ +.+++...++.+.++
T Consensus 163 ~~g~d~iein~~sP~~~g~~~~~-~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi---~~~~-~~~~~~~~a~~l~~~ 237 (336)
T 1f76_A 163 YAYAGYIAINISSPNTPGLRTLQ-YGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI---APDL-SEEELIQVADSLVRH 237 (336)
T ss_dssp GGGCSEEEEECCCSSSTTGGGGG-SHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC---CSCC-CHHHHHHHHHHHHHT
T ss_pred hccCCEEEEEccCCCCCCccccc-CHHHHHHHHHHHHHHHHhhhhcccccCceEEEe---cCCC-CHHHHHHHHHHHHHc
Confidence 3588887664411 11112 3566667777787776 22355663 4455 667888889999999
Q ss_pred CCCEEecCCC
Q psy10250 87 GSDFIKTSTG 96 (387)
Q Consensus 87 g~dfvKTSTG 96 (387)
|+|+|.-|.+
T Consensus 238 Gvd~i~vsn~ 247 (336)
T 1f76_A 238 NIDGVIATNT 247 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCcEEEEeCC
Confidence 9999996543
No 315
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=76.17 E-value=16 Score=34.50 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=69.0
Q ss_pred HHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeec-----c----CCC-h--------
Q psy10250 223 HEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVG-----E----LKT-S-------- 282 (387)
Q Consensus 223 ~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~-----~----L~t-~-------- 282 (387)
..++.+.+. |.+-|++-+++.. ..-.+++++..+..+ +++. +-.. + |.+ +
T Consensus 37 e~l~~aa~~~G~~~VEl~~~~~~------~~~~~~l~~~l~~~G----l~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i 106 (333)
T 3ktc_A 37 DQINAAKEVGELSYVDLPYPFTP------GVTLSEVKDALKDAG----LKAIGITPEIYLQKWSRGAFTNPDPAARAAAF 106 (333)
T ss_dssp HHHHHHHHHSSEEEEEEEESCST------TCCHHHHHHHHHHHT----CEEEEEEECTTSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEecCCCcc------hhHHHHHHHHHHHcC----CeEEEEecCcCcccccCCCCCCcCHHHHHHHH
Confidence 345555666 9999999755432 112233444333322 4543 2221 1 322 2
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCC----CCCCh-hhhHhHHHHHHHHHHHcCCCceEeEe---------ccCCCHHHH
Q psy10250 283 ENIYCASMTAMFAGSDFIKTSTGKEK----TNATI-PAGIIMCSAIKHFHKLSGKKIGLKPA---------GGISTFEDS 348 (387)
Q Consensus 283 e~i~~a~~ia~~aGaDfVKTSTGf~~----~gat~-~~~~~m~~~v~~~~~~~~~~~gIKas---------GGIrt~~~a 348 (387)
+.+.++.++|.+.|+++|..-+|+.. ...+. +....+.+.++.+.+... +++|..- .-+.|.+++
T Consensus 107 ~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~~i~lE~~p~~~~~~~~~~~~~~~ 185 (333)
T 3ktc_A 107 ELMHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANP-DVKFAIEYKPREPRVKMTWDSAART 185 (333)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCT-TSEEEEECCSCSSSSEESSCSHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhh-cCCEEEEEecCCCCccccCCCHHHH
Confidence 23556788899999999988877421 12222 233445566666666554 5666654 237899999
Q ss_pred HHHHH
Q psy10250 349 VRWIY 353 (387)
Q Consensus 349 ~~~i~ 353 (387)
..|+.
T Consensus 186 ~~ll~ 190 (333)
T 3ktc_A 186 LLGIE 190 (333)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 316
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=76.09 E-value=27 Score=34.79 Aligned_cols=157 Identities=11% Similarity=0.006 Sum_probs=101.1
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchh----h----------h-----cC--C------hhH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL----V----------L-----NN--Q------WPE 252 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~----l----------k-----~g--~------~~~ 252 (387)
..+++-+.+ + ..+.+.-+.+++.+++.|.+-+=+=+.... + - -+ . .+.
T Consensus 138 ~~v~~y~~~-~----~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~ 212 (425)
T 3vcn_A 138 TGVTVYGHA-N----GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNS 212 (425)
T ss_dssp SSEEEEEEE-E----ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTT
T ss_pred CeeeEEEeC-C----CCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHH
Confidence 356664442 2 246777788999999999988765332100 0 0 00 0 123
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
..+=+++|++++++. +.+++....=-+.++-.+.++...+.|.+||--+..- -.++ ..+.+++.+
T Consensus 213 d~e~v~avR~a~G~d--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~----~d~~-------~~~~l~~~~-- 277 (425)
T 3vcn_A 213 VPKLFERAREVLGWD--VHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPA----ENQA-------GFRLIRQHT-- 277 (425)
T ss_dssp THHHHHHHHHHHCSS--SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCC----SSTT-------HHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCC--CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCh----hhHH-------HHHHHHhcC--
Confidence 345578888888753 4566666432266777778888888999999866531 1232 345555543
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcceeec-cchHHHHH
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
.+.|=+-+.+.+..++..++. .| ++.++++..|+|. +.++++..
T Consensus 278 ~iPIa~dE~~~~~~~~~~~i~-----~~a~d~v~~k~~~~GGit~~~~ia~ 323 (425)
T 3vcn_A 278 TTPLAVGEIFAHVWDAKQLIE-----EQLIDYLRATVLHAGGITNLKKIAA 323 (425)
T ss_dssp CSCEEECTTCCSGGGTHHHHH-----TTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred CCCEEeCCCcCCHHHHHHHHH-----cCCCCeEecChhhcCCHHHHHHHHH
Confidence 466777778999999999994 54 7888999999964 55555554
No 317
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=76.07 E-value=9.5 Score=34.32 Aligned_cols=119 Identities=15% Similarity=0.055 Sum_probs=69.5
Q ss_pred CCCeEEEEECCc---------cHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHH--------HHHHHHHHHCCCCe
Q psy10250 173 NVHTAAVCVYPA---------RVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETR--------LHEIELLAKQKVDE 235 (387)
Q Consensus 173 ~~~~~aVcV~P~---------~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K--------~~Ea~~Ai~~GAdE 235 (387)
++||.+|-+.+. .+...++.++. .++++.++ ++|......+.. ...++.|.+.|++-
T Consensus 27 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~----~gl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~ 100 (281)
T 3u0h_A 27 ETGYRYVDVPFHWLEAEAERHGDAAVEAMFQR----RGLVLANL--GLPLNLYDSEPVFLRELSLLPDRARLCARLGARS 100 (281)
T ss_dssp HTTCSEECCCHHHHHHHHHHHCHHHHHHHHHT----TTCEECCE--ECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCE
T ss_pred HcCCCEEEecHHHHHHHhcccCHHHHHHHHHH----cCCceEEe--cccccccCCCHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 567777777654 34566777764 68888655 566443332221 12456778889998
Q ss_pred eeeecCch-h-hhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-----------cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 236 VDIVIQRS-L-VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-----------ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 236 ID~Vin~~-~-lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-----------~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
|=+.+-.+ . -....|+.+.+-++++.+.+.. .-+++-+|+. .+.+.+++. ++....|.+.++
T Consensus 101 v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~vg 175 (281)
T 3u0h_A 101 VTAFLWPSMDEEPVRYISQLARRIRQVAVELLP-LGMRVGLEYVGPHHLRHRRYPFVQSLADLK---TFWEAIGAPNVG 175 (281)
T ss_dssp EEEECCSEESSCHHHHHHHHHHHHHHHHHHHGG-GTCEEEEECCCCGGGCCSSEECCCSHHHHH---HHHHHHCCTTEE
T ss_pred EEEeecCCCCCcchhhHHHHHHHHHHHHHHHHH-cCCEEEEEeccccccccccccccCCHHHHH---HHHHHcCCCCee
Confidence 65322111 0 0112456667777777777754 4589999975 355655443 445555655544
No 318
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=75.78 E-value=11 Score=34.38 Aligned_cols=120 Identities=9% Similarity=0.070 Sum_probs=69.3
Q ss_pred CCCeEEEEECCc--------cHHHHHHHhhhcCCCCCceEEEEecCCCC----CCCCHHHH-------HHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVYPA--------RVVDVIKVLDRENARDDVKVASVAAGFPS----GQYLLETR-------LHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~P~--------~v~~a~~~L~~~~~~~~v~v~tVvigFP~----G~~~~e~K-------~~Ea~~Ai~~GA 233 (387)
+.||.+|-+.+. .++..++.++. .++++.+. .++|. +....+.. ...++.|.+.|+
T Consensus 28 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~----~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~ 102 (294)
T 3vni_A 28 KLGFDILEIAASPLPFYSDIQINELKACAHG----NGITLTVG-HGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDV 102 (294)
T ss_dssp HHTCSEEEEESTTGGGCCHHHHHHHHHHHHH----TTCEEEEE-ECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HcCCCEEEecCcccCCcCHHHHHHHHHHHHH----cCCeEEEe-ecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457777776632 35666777775 68998875 36653 32232221 124667778899
Q ss_pred CeeeeecCchh---hh-----cCChhHHHHHHHHHHHHhCCCcceEEEEeec------cCCChHHHHHHHHHHHHcCCCE
Q psy10250 234 DEVDIVIQRSL---VL-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDF 299 (387)
Q Consensus 234 dEID~Vin~~~---lk-----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~t~e~i~~a~~ia~~aGaDf 299 (387)
+-|=+++.-+. +. ...|+.+.+-++++.+.+.. .-+++-+|+. .+.+.++. .++..+.+.+.
T Consensus 103 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lEn~~~~~~~~~~~~~~~---~~l~~~v~~~~ 178 (294)
T 3vni_A 103 HLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEA-CGVDFCLEVLNRFENYLINTAQEG---VDFVKQVDHNN 178 (294)
T ss_dssp CEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHH-TTCEEEEECCCTTTCSSCCSHHHH---HHHHHHHCCTT
T ss_pred CeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEecCcccCcccCCHHHH---HHHHHHcCCCC
Confidence 98754443221 11 12345566667777766643 3589999975 34454444 44555556554
Q ss_pred EE
Q psy10250 300 IK 301 (387)
Q Consensus 300 VK 301 (387)
++
T Consensus 179 vg 180 (294)
T 3vni_A 179 VK 180 (294)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 319
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.32 E-value=5.1 Score=37.52 Aligned_cols=78 Identities=14% Similarity=0.038 Sum_probs=47.5
Q ss_pred HHHHHHHHH--cCCCeeeeecchhHHhc------CChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 13 LHEIELLAK--QKVDEVDIVIQRSLVLN------NQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 13 ~~E~~~a~~--~GA~EiD~Vin~~~lk~------g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
..++...+. .|+|.|++-++....+. ++.+.+.+-++++++.++-.+.+|+. ..+.+ +...++.+.
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~---~~~~~---~~~~a~~l~ 186 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLS---PNVTD---IVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEEC---SCSSC---SHHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEEC---CChHH---HHHHHHHHH
Confidence 344444444 89998877554333322 35677788888888776433445553 22322 334466778
Q ss_pred HcCCCEEecCCC
Q psy10250 85 FAGSDFIKTSTG 96 (387)
Q Consensus 85 ~ag~dfvKTSTG 96 (387)
++|+|+|..+.+
T Consensus 187 ~~G~d~i~v~~~ 198 (311)
T 1ep3_A 187 AAGADGLTMINT 198 (311)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEEeCC
Confidence 999999997643
No 320
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=75.22 E-value=18 Score=34.05 Aligned_cols=130 Identities=11% Similarity=0.090 Sum_probs=78.1
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee---ccCCChHHHHHH---HHHHHHc
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV---GELKTSENIYCA---SMTAMFA 295 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt---~~L~t~e~i~~a---~~ia~~a 295 (387)
+..+..|.+.|||-|.++-|+. .|=...=+..++.+++.+. .++-|+|=- ++.-+++|+... .+.+.++
T Consensus 11 ~~~a~~A~~~GAdRIELc~~L~---~GGlTPS~g~i~~~~~~~~--ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 85 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAPK---EGGLTPSLGVLKSVRQRVT--IPVHPIIRPRGGDFCYSDGEFAAILEDVRTVREL 85 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCGG---GTCBCCCHHHHHHHHHHCC--SCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEcCCcc---cCCCCCCHHHHHHHHHHcC--CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 4567888899999999997753 3544444556677777664 688888843 344466676654 4578889
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC-CceE-eEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK-KIGL-KPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~-~~gI-KasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
|+|-|-- |+-...-+++ .+.++.+.+..++ .+-+ .|-=-++++.+|++.+. .+|. .||=|
T Consensus 86 GadGvV~--G~Lt~dg~iD-----~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~----~lG~-------~rILT 147 (256)
T 1twd_A 86 GFPGLVT--GVLDVDGNVD-----MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLA----ELGI-------ARVLT 147 (256)
T ss_dssp TCSEEEE--CCBCTTSSBC-----HHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHH----HHTC-------CEEEE
T ss_pred CCCEEEE--eeECCCCCcC-----HHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHH----HcCC-------CEEEC
Confidence 9996652 3321111222 2344444444332 1111 11122578888887775 5787 68877
Q ss_pred c
Q psy10250 374 S 374 (387)
Q Consensus 374 S 374 (387)
|
T Consensus 148 S 148 (256)
T 1twd_A 148 S 148 (256)
T ss_dssp C
T ss_pred C
Confidence 6
No 321
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=75.21 E-value=12 Score=36.26 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCCEEEcCCC--C------C--------CCCCChh-hhHhHHHHHHHHHHHcCCCceEeEecc-----CC
Q psy10250 286 YCASMTAMFAGSDFIKTSTG--K------E--------KTNATIP-AGIIMCSAIKHFHKLSGKKIGLKPAGG-----IS 343 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTG--f------~--------~~gat~~-~~~~m~~~v~~~~~~~~~~~gIKasGG-----Ir 343 (387)
.+|++.|.++|.|.|.---| | + ..|-+++ ..+..++-|+.+++.+...++||.|.. =-
T Consensus 147 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 147 QNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSC
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 34788899999999985332 2 1 1244555 345566777777888877899999953 12
Q ss_pred CHHHHHHHHHHHHHhcCCCccC
Q psy10250 344 TFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 344 t~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+.++...+....+ .+|++||+
T Consensus 227 ~~~~~~~la~~L~-~~Gvd~i~ 247 (340)
T 3gr7_A 227 TAKDYVPYAKRMK-EQGVDLVD 247 (340)
T ss_dssp CGGGHHHHHHHHH-HTTCCEEE
T ss_pred CHHHHHHHHHHHH-HcCCCEEE
Confidence 4566666554433 57998874
No 322
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=75.04 E-value=8.7 Score=35.08 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=42.9
Q ss_pred HHHHHHHcCCCEEE-cCCCCC--CCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 288 ASMTAMFAGSDFIK-TSTGKE--KTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 288 a~~ia~~aGaDfVK-TSTGf~--~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
.++.+.+.|+++|= |++... ..|..+ +.++.+++.+ ++.|=++|||++.+++..++ .+|++
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~~~-------~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~-----~~Gad-- 224 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGYDT-------EMIRFVRPLT--TLPIIASGGAGKMEHFLEAF-----LAGAD-- 224 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCCCH-------HHHHHHGGGC--CSCEEEESCCCSHHHHHHHH-----HHTCS--
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCCCH-------HHHHHHHHHc--CCCEEEeCCCCCHHHHHHHH-----HcCCH--
Confidence 34556788999764 322211 123333 3445554443 57788999999999999998 47874
Q ss_pred CCCcceeecc
Q psy10250 365 NKDLFRIGAS 374 (387)
Q Consensus 365 ~~~~~RIGtS 374 (387)
..-+|++
T Consensus 225 ---gv~vgsa 231 (266)
T 2w6r_A 225 ---AALAASV 231 (266)
T ss_dssp ---EEEESTT
T ss_pred ---HHHccHH
Confidence 3456654
No 323
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=75.03 E-value=41 Score=33.26 Aligned_cols=158 Identities=9% Similarity=-0.027 Sum_probs=101.0
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchh----hh-----------cC------------ChhH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL----VL-----------NN------------QWPE 252 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~----lk-----------~g------------~~~~ 252 (387)
..+++-+.+ + ..+.+.-..+++.+++.|.+-+-+=+.... +. .| +.+.
T Consensus 131 ~~v~~y~~~-~----~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (418)
T 3r4e_A 131 DGIMVYGHA-N----GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNY 205 (418)
T ss_dssp SSEEEEEEE-E----ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHH
T ss_pred CeeeEEEeC-C----CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHH
Confidence 356665542 2 345777788899999999999886443210 00 00 0223
Q ss_pred HHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC
Q psy10250 253 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK 332 (387)
Q Consensus 253 v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~ 332 (387)
..+=+++|++++++. +.+++....=-+.++-.+.++...+.|.+||--+..- ...+ ..+.+++.+
T Consensus 206 d~~~v~avR~a~G~d--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~----~d~~-------~~~~l~~~~-- 270 (418)
T 3r4e_A 206 VPKLFEELRKTYGFD--HHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPA----ENQE-------AFRLVRQHT-- 270 (418)
T ss_dssp HHHHHHHHHHHHCSS--SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCC----SSGG-------GGHHHHHHC--
T ss_pred HHHHHHHHHHHcCCC--CeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCc----cCHH-------HHHHHHhcC--
Confidence 344567888888753 4566665432266777778888888999999865521 1232 234444443
Q ss_pred CceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcceeec-cchHHHHHH
Q psy10250 333 KIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRIGA-SSLLNNILQ 382 (387)
Q Consensus 333 ~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RIGt-Ss~~~il~~ 382 (387)
.+.|=+-+.+.+..++..++. .| ++.++++..|+|. +.++++..-
T Consensus 271 ~iPIa~dE~~~~~~~~~~~l~-----~~a~d~v~~k~~~~GGit~~~~ia~~ 317 (418)
T 3r4e_A 271 VTPLAVGEIFNTIWDAKDLIQ-----NQLIDYIRATVVGAGGLTHLRRIADL 317 (418)
T ss_dssp CSCEEECTTCCSGGGTHHHHH-----TTCCSEECCCTTTTTHHHHHHHHHHH
T ss_pred CCCEEEcCCcCCHHHHHHHHH-----cCCCCeEecCccccCCHHHHHHHHHH
Confidence 466767778999999999994 54 7888999999864 555555543
No 324
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=74.84 E-value=3.9 Score=36.30 Aligned_cols=112 Identities=13% Similarity=0.166 Sum_probs=59.3
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE---
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI--- 300 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV--- 300 (387)
.++.+.+.|||-+=+-. .. . +...+-++.+++ . + .++++-..-- ++.+..+ ....++|||
T Consensus 76 ~i~~~~~~gad~v~vh~--~~--~---~~~~~~~~~~~~-~-g---~~i~~~~~~~-t~~e~~~----~~~~~~d~vl~~ 138 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHT--ES--T---RHIHGALQKIKA-A-G---MKAGVVINPG-TPATALE----PLLDLVDQVLIM 138 (220)
T ss_dssp GHHHHHHHTCSEEEEEG--GG--C---SCHHHHHHHHHH-T-T---SEEEEEECTT-SCGGGGG----GGTTTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEcc--Cc--c---ccHHHHHHHHHH-c-C---CcEEEEEcCC-CCHHHHH----HHHhhCCEEEEE
Confidence 35788888998753322 11 1 222333333433 1 2 3455544222 2232222 224679999
Q ss_pred EcCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 301 KTSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 301 KTSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
-+..||+.. +... ...+.++.+++.. +..+.|=++|||+ .+++.+++ .+|++
T Consensus 139 ~~~~g~~g~--~~~~--~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~-----~~Gad 193 (220)
T 2fli_A 139 TVNPGFGGQ--AFIP--ECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACY-----EAGAN 193 (220)
T ss_dssp SSCTTCSSC--CCCG--GGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHH-----HHTCC
T ss_pred EECCCCccc--ccCH--HHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHH-----HcCCC
Confidence 556666532 2211 1223455555444 2357788999999 78888877 47885
No 325
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=74.81 E-value=37 Score=31.53 Aligned_cols=144 Identities=13% Similarity=0.075 Sum_probs=91.5
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEE------
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL------ 274 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIl------ 274 (387)
..++|+.+ -+ .+.+.-..+++.+.+.|||=|.+-+|+=. ...+.+.+.+-+..+++.+++ +.+|+
T Consensus 19 ~p~Icv~l-~~----~~~~e~~~~~~~~~~~~~D~vElRvD~l~-~~~~~~~v~~~l~~lr~~~~~---~PiI~T~Rt~~ 89 (257)
T 2yr1_A 19 EPCICAPV-VG----EDDRKVLREAEEVCRKQPDLLEWRADFFR-AIDDQERVLATANGLRNIAGE---IPILFTIRSER 89 (257)
T ss_dssp SCEEEEEE-CC----SSHHHHHHHHHHHHHSCCSEEEEEGGGCT-TTTCHHHHHHHHHHHHHHSSS---CCEEEECCCTT
T ss_pred CcEEEEEe-cC----CCHHHHHHHHHHHhhcCCCEEEEEeeccc-ccCcHHHHHHHHHHHHHhccC---CCEEEEEeecc
Confidence 56788774 44 35566678899999999999999999621 112467788888888887743 23444
Q ss_pred eec---cCCChHHHHHHHHHHHHcC-CCEEEc--CCC-------------CC-------CCCCChhhhHhHHHHHHHHHH
Q psy10250 275 AVG---ELKTSENIYCASMTAMFAG-SDFIKT--STG-------------KE-------KTNATIPAGIIMCSAIKHFHK 328 (387)
Q Consensus 275 Et~---~L~t~e~i~~a~~ia~~aG-aDfVKT--STG-------------f~-------~~gat~~~~~~m~~~v~~~~~ 328 (387)
|-+ .+ ++++-.+..+.+++.| +|||=- +++ .. .-.-||.. ..|.+-++.+.+
T Consensus 90 eGG~~~~~-~~~~~~~ll~~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~-~el~~~~~~~~~ 167 (257)
T 2yr1_A 90 EGGQPIPL-NEAEVRRLIEAICRSGAIDLVDYELAYGERIADVRRMTEECSVWLVVSRHYFDGTPRK-ETLLADMRQAER 167 (257)
T ss_dssp TTCCCCSS-CHHHHHHHHHHHHHHTCCSEEEEEGGGTTHHHHHHHHHHHTTCEEEEEEEESSCCCCH-HHHHHHHHHHHH
T ss_pred cCCCCCCC-CHHHHHHHHHHHHHcCCCCEEEEECCCChhHHHHHHHHHhCCCEEEEEecCCCCCcCH-HHHHHHHHHHHh
Confidence 223 34 5566667788888888 999851 111 00 01234532 223333444432
Q ss_pred HcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 329 LSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 329 ~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
.|-.+ +|.+.=-++.+|.+.++.+..+
T Consensus 168 -~gaDi-vKia~~a~s~~D~l~ll~~~~~ 194 (257)
T 2yr1_A 168 -YGADI-AKVAVMPKSPEDVLVLLQATEE 194 (257)
T ss_dssp -TTCSE-EEEEECCSSHHHHHHHHHHHHH
T ss_pred -cCCCE-EEEEeccCCHHHHHHHHHHHHH
Confidence 34444 8999999999999999975443
No 326
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=74.80 E-value=25 Score=35.84 Aligned_cols=81 Identities=28% Similarity=0.234 Sum_probs=61.0
Q ss_pred cceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE-----------------cCCCCCCCCCChhhhHhHHHHHHHHHHHc
Q psy10250 268 IHMKTILAVGELKTSENIYCASMTAMFAGSDFIK-----------------TSTGKEKTNATIPAGIIMCSAIKHFHKLS 330 (387)
Q Consensus 268 ~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK-----------------TSTGf~~~gat~~~~~~m~~~v~~~~~~~ 330 (387)
-.+-+|+-|+-+ .|.|.+| +.|...|||-|- |.-|||...+|-+.+++|..++-+..+.+
T Consensus 151 p~iy~ivAtG~i--~eDi~qa-~aAA~~GAD~IaVIRttgQSllDyvp~GaT~eG~GGt~aTqenfR~mRkALD~v~~ev 227 (516)
T 1xrs_A 151 PLLYVIVATGNI--YEDITQA-VAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVGAEV 227 (516)
T ss_dssp CEEEEEECCSCH--HHHHHHH-HHHHHTTCSEEEECCCTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCch--HHHHHHH-HHHHHcCCCEEEEecccchhhhcccCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHh
Confidence 367899999988 5678766 778889999764 55566667788889999998888888888
Q ss_pred CCCceEeE-eccCCCHHHHHHH
Q psy10250 331 GKKIGLKP-AGGISTFEDSVRW 351 (387)
Q Consensus 331 ~~~~gIKa-sGGIrt~~~a~~~ 351 (387)
|.-+.+-- +-|+--+|-|.-+
T Consensus 228 gRyI~~~nY~SGlcmPEIA~m~ 249 (516)
T 1xrs_A 228 GKYIRLCNYCSGLCMPEIAAMG 249 (516)
T ss_dssp TSCCEEEEECCSTTHHHHHHHH
T ss_pred CCeeeeeccccccccHHHHHHH
Confidence 88777665 3466666655444
No 327
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=74.66 E-value=60 Score=30.87 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
.+.+.-..+++.+++.|.+-+.+ .++. +.+.-.+-+++|+++ ++. +++.+....--+.++-.+.++...+.
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKi--k~g~----~~~~d~~~v~avr~~-g~~--~~l~vDan~~~~~~~a~~~~~~l~~~ 208 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKI--KVGE----NLKEDIEAVEEIAKV-TRG--AKYIVDANMGYTQKEAVEFARAVYQK 208 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE--ECCS----CHHHHHHHHHHHHHH-STT--CEEEEECTTCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCcCEEEE--eecC----CHHHHHHHHHHHHhh-CCC--CeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 35666778899999999999885 3321 444445557888887 643 45566654322567777777888889
Q ss_pred CCC--EEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 296 GSD--FIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 296 GaD--fVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
|.+ ||--..- +++. +..+.+++.+ ++.|=+-+.+.+.+++..++. .-.++.++++..| |.
T Consensus 209 ~i~~~~iE~P~~-------~~~~----~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~-GG 270 (345)
T 2zad_A 209 GIDIAVYEQPVR-------REDI----EGLKFVRFHS--PFPVAADESARTKFDVMRLVK----EEAVDYVNIKLMK-SG 270 (345)
T ss_dssp TCCCSEEECCSC-------TTCH----HHHHHHHHHS--SSCEEESTTCCSHHHHHHHHH----HTCCSEEEECHHH-HH
T ss_pred CCCeeeeeCCCC-------cccH----HHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHH----hCCCCEEEEeccc-cc
Confidence 999 9975431 1221 3445555543 466666667899999999995 3336666777777 65
Q ss_pred -cchHHHH
Q psy10250 374 -SSLLNNI 380 (387)
Q Consensus 374 -Ss~~~il 380 (387)
+..+++.
T Consensus 271 it~~~~i~ 278 (345)
T 2zad_A 271 ISDALAIV 278 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 4444444
No 328
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=74.48 E-value=64 Score=31.16 Aligned_cols=147 Identities=15% Similarity=0.026 Sum_probs=94.3
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.
T Consensus 34 Gv~~alv-TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~ 110 (343)
T 2v9d_A 34 GIIPPVS-TIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR--RVPVLIGTGGT 110 (343)
T ss_dssp EECCEEC-CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCSS
T ss_pred CeEEeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCC
Confidence 3444444 456 4677778888888999999999986554445544444455555666667776654 57899999998
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhH--------------------------HHHHHHHHHHcCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIM--------------------------CSAIKHFHKLSGKK 333 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m--------------------------~~~v~~~~~~~~~~ 333 (387)
++ ++..+.++.|.++|+|.|=-.+=|... .|.+.+..- .+.++.+.+..++=
T Consensus 111 st-~eai~la~~A~~~Gadavlv~~P~Y~~-~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnI 188 (343)
T 2v9d_A 111 NA-RETIELSQHAQQAGADGIVVINPYYWK-VSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNI 188 (343)
T ss_dssp CH-HHHHHHHHHHHHHTCSEEEEECCSSSC-CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTE
T ss_pred CH-HHHHHHHHHHHhcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCE
Confidence 66 456678899999999987655544221 132222111 12344444235777
Q ss_pred ceEeEeccCCCHHHHHHHHHH
Q psy10250 334 IGLKPAGGISTFEDSVRWIYL 354 (387)
Q Consensus 334 ~gIKasGGIrt~~~a~~~i~l 354 (387)
+|||-|.| +..+..+++..
T Consensus 189 vgiKdssg--d~~~~~~l~~~ 207 (343)
T 2v9d_A 189 IGIKDTID--SVAHLRSMIHT 207 (343)
T ss_dssp EEEEECCS--CHHHHHHHHHH
T ss_pred EEEEeCCC--CHHHHHHHHHh
Confidence 89999876 56666666643
No 329
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=74.22 E-value=35 Score=33.30 Aligned_cols=145 Identities=10% Similarity=-0.005 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcC---ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNN---QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g---~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
+.-..+++.+++.|.+-+-+=+.-+..... +.+...+=++++++++++ -+.+.+...---+.++-.+.++...+.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~--d~~l~vDan~~~~~~~ai~~~~~l~~~ 227 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGP--AGKIMIDANNAYNLNLTKEVLAALSDV 227 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCT--TCCEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 666788899999998887753332111100 223444556677777765 356667764332667766777777778
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHc---CCCceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCccee
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLS---GKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRI 371 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~---~~~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RI 371 (387)
|.+||--..- -.+ +..+.+++.. +.++.|=+-+ +.+.+++..++. .| ++.++++..++
T Consensus 228 ~i~~iE~P~~-----~d~-------~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~-----~~~~d~v~ik~~~~ 289 (392)
T 3p3b_A 228 NLYWLEEAFH-----EDE-------ALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWAT-----RGRVDVLQYDIIWP 289 (392)
T ss_dssp CEEEEECSSS-----CCH-------HHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHH-----TTSCCEECCBTTTB
T ss_pred CCCEEecCCc-----ccH-------HHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHH-----cCCCCEEEeCcccc
Confidence 9999985431 122 2344444441 2357777767 999999999994 55 67788888888
Q ss_pred eccchHHHHHHH
Q psy10250 372 GASSLLNNILQE 383 (387)
Q Consensus 372 GtSs~~~il~~~ 383 (387)
|-+..+++..-+
T Consensus 290 Git~~~~i~~~A 301 (392)
T 3p3b_A 290 GFTHWMELGEKL 301 (392)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 777777776543
No 330
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=74.20 E-value=24 Score=36.90 Aligned_cols=133 Identities=14% Similarity=0.209 Sum_probs=76.7
Q ss_pred HHHHHHHHHHcCCCeeeeecchhHHh----c---------------CChhHHHHHHHHHHHHcccCccE--EEEE-ec--
Q psy10250 12 RLHEIELLAKQKVDEVDIVIQRSLVL----N---------------NQWPELFSEVKQMKEKCEEKIHM--KTIL-AV-- 67 (387)
Q Consensus 12 K~~E~~~a~~~GA~EiD~Vin~~~lk----~---------------g~~~~v~~ei~~v~~~~~~~~~~--KvIl-Et-- 67 (387)
=+..|+.|.+.|.|-|++=.--|+|. | ++...+.+=+++|+++++.+.++ |+=. |.
T Consensus 143 ~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 143 FARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE 222 (671)
T ss_dssp HHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC
Confidence 34557888899999999754333321 1 12244556667777777654443 4433 21
Q ss_pred -cCCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccC-CCC-CC
Q psy10250 68 -GELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTL-SGD-DT 144 (387)
Q Consensus 68 -~~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L-~~~-~T 144 (387)
| + +.++....++.+.++|+|||--|.|+.... .+ ...+ + ..+ -++..+++++.+.++..+. ... .|
T Consensus 223 ~g-~-~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~--~~-~~~~---~--~~~-~~~~~~~~~i~~~~~iPvi~~Ggi~~ 291 (671)
T 1ps9_A 223 DG-G-TFAETVELAQAIEAAGATIINTGIGWHEAR--IP-TIAT---P--VPR-GAFSWVTRKLKGHVSLPLVTTNRIND 291 (671)
T ss_dssp TC-C-CHHHHHHHHHHHHHHTCSEEEEEECBTTCS--SC-SSST---T--SCT-TTTHHHHHHHTTSCSSCEEECSSCCS
T ss_pred CC-C-CHHHHHHHHHHHHhcCCCEEEcCCCccccc--cc-cccc---c--CCc-chHHHHHHHHHHhcCceEEEeCCCCC
Confidence 3 3 556677778888999999999887753211 01 0111 0 011 1233455666666665543 223 38
Q ss_pred HHHHHHHHHHh
Q psy10250 145 EAVVETLTLKA 155 (387)
Q Consensus 145 ~~~i~~l~~~A 155 (387)
.++.++++++-
T Consensus 292 ~~~a~~~l~~g 302 (671)
T 1ps9_A 292 PQVADDILSRG 302 (671)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 88888888763
No 331
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=74.00 E-value=6.7 Score=38.67 Aligned_cols=81 Identities=11% Similarity=0.103 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCEEEcC--CCC--------------CCCCCChh-hhHhHHHHHHHHHHHcCC-CceEeEecc----
Q psy10250 284 NIYCASMTAMFAGSDFIKTS--TGK--------------EKTNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAGG---- 341 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTS--TGf--------------~~~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasGG---- 341 (387)
+..+|++.|.++|.|.|+-- -|| ...|-+++ ..+..++-|+.+++.++. .++||.|.+
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 45568889999999999853 233 11222343 445566777778888874 899999853
Q ss_pred -C---CCHHHHHHHHHHHHHhcCCCccC
Q psy10250 342 -I---STFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 342 -I---rt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+ .+.+++..+.... +.+|.+|++
T Consensus 248 g~~~~~~~~~~~~la~~l-e~~Gvd~i~ 274 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESL-NKYDLAYCH 274 (376)
T ss_dssp TCCCSCHHHHHHHHHHHH-GGGCCSEEE
T ss_pred CCCCCCCHHHHHHHHHHH-HHcCCCEEE
Confidence 2 2455666666543 357998873
No 332
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=73.39 E-value=12 Score=36.96 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEe
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIK 92 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvK 92 (387)
...++.+++.|+|-|. ++... |....+.+.++.+++..++ ++||.-+ .. +.++ ++.++++|+|+|+
T Consensus 102 ~e~~~~a~~aGvdvI~--id~a~---G~~~~~~e~I~~ir~~~~~---~~Vi~G~-V~-T~e~----A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 102 LQRAEALRDAGADFFC--VDVAH---AHAKYVGKTLKSLRQLLGS---RCIMAGN-VA-TYAG----ADYLASCGADIIK 167 (361)
T ss_dssp HHHHHHHHHTTCCEEE--EECSC---CSSHHHHHHHHHHHHHHTT---CEEEEEE-EC-SHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEE--EeCCC---CCcHhHHHHHHHHHHhcCC---CeEEEcC-cC-CHHH----HHHHHHcCCCEEE
Confidence 4458889999998543 33221 4455667788888876542 5677632 23 5554 4567899999999
Q ss_pred cCCC
Q psy10250 93 TSTG 96 (387)
Q Consensus 93 TSTG 96 (387)
.|.|
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 8544
No 333
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=73.39 E-value=26 Score=33.57 Aligned_cols=199 Identities=16% Similarity=0.139 Sum_probs=121.1
Q ss_pred cEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccC
Q psy10250 60 HMKTILAVGELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTL 139 (387)
Q Consensus 60 ~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L 139 (387)
.-+++||.|.. +.+ .+..|.++|||.|-=-++..-+|-||+.... +.+.++.
T Consensus 37 ~~~~~lEvc~~-s~~----~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i------------------~~a~~~~----- 88 (287)
T 3iwp_A 37 ANGFLMEVCVD-SVE----SAVNAERGGADRIELCSGLSEGGTTPSMGVL------------------QVVKQSV----- 88 (287)
T ss_dssp -CCSEEEEEES-SHH----HHHHHHHHTCSEEEECBCGGGTCBCCCHHHH------------------HHHHTTC-----
T ss_pred CCCceEEEEeC-CHH----HHHHHHHhCCCEEEECCCCCCCCCCCCHHHH------------------HHHHHhc-----
Confidence 44789999986 544 3456788999999999888777777662211 1111110
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHH
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLE 219 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e 219 (387)
+.. --+.|.|.- .+|-....-.+
T Consensus 89 ---------------------------------~ip-V~vMIRPRg-----------------------GdF~Ys~~E~~ 111 (287)
T 3iwp_A 89 ---------------------------------QIP-VFVMIRPRG-----------------------GDFLYSDREIE 111 (287)
T ss_dssp ---------------------------------CSC-EEEECCSSS-----------------------SCSCCCHHHHH
T ss_pred ---------------------------------CCC-eEEEEecCC-----------------------CCcccCHHHHH
Confidence 111 135666631 25666666677
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhh-cCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVL-NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk-~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD 298 (387)
.-...++.+.+.|||.|=+= .|. +|..+. +-++++.+++++ +.|-+--..=...+ -..|-+..++.|.|
T Consensus 112 ~M~~dI~~~~~~GAdGvVfG----~L~~dg~iD~--~~~~~Li~~a~~---l~vTFHRAFD~~~d-~~~Ale~Li~lGvd 181 (287)
T 3iwp_A 112 VMKADIRLAKLYGADGLVFG----ALTEDGHIDK--ELCMSLMAICRP---LPVTFHRAFDMVHD-PMAALETLLTLGFE 181 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEEC----CBCTTSCBCH--HHHHHHHHHHTT---SCEEECGGGGGCSC-HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCEEEEe----eeCCCCCcCH--HHHHHHHHHcCC---CcEEEECchhccCC-HHHHHHHHHHcCCC
Confidence 77889999999999986443 332 222221 234445555553 55666544100111 34677888888999
Q ss_pred EEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 299 FIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 299 fVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
-|=||-|.. ++ ++- ++.++.+.+..++++.|-+-|||+.-+ +..++. ..|++++.
T Consensus 182 rILTSG~~~--~a-~~G----l~~Lk~Lv~~a~~rI~ImaGGGV~~~N-i~~l~~----~tG~~~~H 236 (287)
T 3iwp_A 182 RVLTSGCDS--SA-LEG----LPLIKRLIEQAKGRIVVMPGGGITDRN-LQRILE----GSGATEFH 236 (287)
T ss_dssp EEEECTTSS--ST-TTT----HHHHHHHHHHHTTSSEEEECTTCCTTT-HHHHHH----HHCCSEEE
T ss_pred EEECCCCCC--Ch-HHh----HHHHHHHHHHhCCCCEEEECCCcCHHH-HHHHHH----hhCCCEEe
Confidence 999987742 22 222 135566667778899999999997654 344443 47887663
No 334
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=73.35 E-value=12 Score=36.34 Aligned_cols=82 Identities=18% Similarity=0.077 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC--CceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~--~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
.+.++..++++.+.+.|.+.||--.|.+..| ..+.....++-|+.+++.+|. .+.|++-||- |.++|++++...+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~-~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~-~~~~a~~~~~~l~- 224 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS-WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWY-SRTDALALGRGLE- 224 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST-TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTC-CHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc-cccchHHHHHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHHH-
Confidence 3567777788888888999998765532222 222334444566677777765 4778888887 6899999987654
Q ss_pred hcCCCcc
Q psy10250 358 MLGPDWL 364 (387)
Q Consensus 358 ~~Ga~w~ 364 (387)
.+|.+|+
T Consensus 225 ~~~i~~i 231 (382)
T 1rvk_A 225 KLGFDWI 231 (382)
T ss_dssp TTTCSEE
T ss_pred hcCCCEE
Confidence 4699888
No 335
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=72.84 E-value=8.4 Score=38.01 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHcCCCEEEc--CCCC--------------CCCCCChh-hhHhHHHHHHHHHHHcCC-CceEeEeccC---
Q psy10250 284 NIYCASMTAMFAGSDFIKT--STGK--------------EKTNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAGGI--- 342 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKT--STGf--------------~~~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasGGI--- 342 (387)
+..+|++.|.++|.|.|.- +-|| ...|-+++ ..+..++-|+.+++.++. .++||.|.+-
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 3446788899999999985 2222 01233343 344556667777888874 8999998641
Q ss_pred -----CCHHHHHHHHHHHHHhcCCCccC
Q psy10250 343 -----STFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 343 -----rt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
-+.+++..+...++ .+|++|++
T Consensus 247 ~~~~~~~~~~~~~la~~le-~~Gvd~i~ 273 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELD-RRGLAYLH 273 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHH-HTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHHHH-HcCCCEEE
Confidence 24677766665443 57998874
No 336
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=72.67 E-value=68 Score=30.60 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=92.4
Q ss_pred CceEEEEecCC--CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 201 DVKVASVAAGF--PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 201 ~v~v~tVvigF--P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-
T Consensus 13 Gv~~a~v-TPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~ 89 (318)
T 3qfe_A 13 GIWCPAV-TFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP--DFPIMAGVGA 89 (318)
T ss_dssp EEEEECC-CCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT--TSCEEEECCC
T ss_pred CeEEeee-CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCC
Confidence 3444444 456 4577777888888999999999986544445544444455555556666666654 5789999998
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCC-CCCCCCChhhhHh---------------------------HHHHHHHHHHHc
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTG-KEKTNATIPAGII---------------------------MCSAIKHFHKLS 330 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTG-f~~~gat~~~~~~---------------------------m~~~v~~~~~~~ 330 (387)
.++ ++-.+.++.|.++|+|.+=--+- |...+.+.+.... -.+.+..+.+..
T Consensus 90 ~~t-~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~ 168 (318)
T 3qfe_A 90 HST-RQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKN 168 (318)
T ss_dssp SSH-HHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHC
T ss_pred CCH-HHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhC
Confidence 866 44557788999999997766655 3211122221111 113444455545
Q ss_pred CCCceEeEeccCCCHHHHHHHHH
Q psy10250 331 GKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 331 ~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
++=+|||-+.| +..+..+++.
T Consensus 169 pnIvgiKdssg--d~~~~~~~~~ 189 (318)
T 3qfe_A 169 PNVVGVKLTCA--SVGKITRLAA 189 (318)
T ss_dssp TTEEEEEESSC--CHHHHHHHHH
T ss_pred CCEEEEEeCCC--CHHHHHHHHH
Confidence 77789999876 6666666653
No 337
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=72.55 E-value=71 Score=30.79 Aligned_cols=140 Identities=10% Similarity=0.104 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHHHH-CCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMF 294 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~-~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~ 294 (387)
.++..+.+++..++ .|.+-+-+=+.. .+.+.-.+-+++|+++.++. +.+.+... -+ +.++-.+.++...+
T Consensus 142 ~~~~~~~~~~~~~~~~G~~~~KiKvg~-----~~~~~d~~~v~avR~~~g~~--~~l~vDan~~~-~~~~a~~~~~~l~~ 213 (370)
T 1chr_A 142 DTKRDLDSAVEMIERRRHNRFKVKLGF-----RSPQDDLIHMEALSNSLGSK--AYLRVDVNQAW-DEQVASVYIPELEA 213 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEEECSS-----SCSHHHHHHHHHHHHHSSTT--CCEEEECTTCC-CTTHHHHHTHHHHT
T ss_pred CcHHHHHHHHHHHHHCCCCEEEEecCC-----CCHHHHHHHHHHHHHhcCCC--CEEEEECCCCC-CHHHHHHHHHHHHh
Confidence 45666778888887 798877663321 24555566688888888753 45566653 34 55666677788888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|.+||--+.. +++. +..+.+++.+ .+.|=+-+-+.+..++..++. .-+++.++++..|+|.
T Consensus 214 ~~i~~iEqP~~-------~~~~----~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~----~~~~d~v~~k~~~~GGi 276 (370)
T 1chr_A 214 LGVELIEQPVG-------RENT----QALRRLSDNN--RVAIMADESLSTLASAFDLAR----DRSVDVFSLKLCNMGGV 276 (370)
T ss_dssp TTEEEEECCSC-------TTCH----HHHHHHHHHS--CSEEEESSSCCSHHHHHHHHT----TTSCSEEEECTTTSCSH
T ss_pred cCCCEEECCCC-------cccH----HHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH----cCCCCEEEECccccCCH
Confidence 89999985442 1111 3445555543 456666667899999999994 2347888999999974
Q ss_pred cchHHHHH
Q psy10250 374 SSLLNNIL 381 (387)
Q Consensus 374 Ss~~~il~ 381 (387)
+.++++..
T Consensus 277 t~~~~i~~ 284 (370)
T 1chr_A 277 SATQKIAA 284 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55655554
No 338
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=72.25 E-value=26 Score=31.23 Aligned_cols=119 Identities=9% Similarity=-0.042 Sum_probs=68.0
Q ss_pred CCCeEEEEEC-C---------ccHHHHHHHhhhcCCCCCceEEEEecCCCC--CCCCHHH-------HHHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVY-P---------ARVVDVIKVLDRENARDDVKVASVAAGFPS--GQYLLET-------RLHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~-P---------~~v~~a~~~L~~~~~~~~v~v~tVvigFP~--G~~~~e~-------K~~Ea~~Ai~~GA 233 (387)
+.||.+|-+. + ..+...++.++. .++++.++ +.|. +....+. =...++.|.+.|+
T Consensus 25 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~----~gl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 98 (278)
T 1i60_A 25 KHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQT----HHIKPLAL--NALVFFNNRDEKGHNEIITEFKGMMETCKTLGV 98 (278)
T ss_dssp HTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHT----SSCEEEEE--EEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCCEEEEccHHHHHHHhccCCHHHHHHHHHH----cCCCeeee--ccccccccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4677777776 3 345677788875 68888765 3343 3222221 1234566777899
Q ss_pred CeeeeecCchh--h-hcCChhHHHHHHHHHHHHhCCCcceEEEEeec-----cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 234 DEVDIVIQRSL--V-LNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-----ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 234 dEID~Vin~~~--l-k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-----~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
+-|=+...... . ....|+.+.+-++++.+.+.. .-+++-+|+. .+.+.+++ .+++.+.|.+.++
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~---~~l~~~~~~~~~g 170 (278)
T 1i60_A 99 KYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEP-YGVKIALEFVGHPQCTVNTFEQA---YEIVNTVNRDNVG 170 (278)
T ss_dssp CEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGG-GTCEEEEECCCCTTBSSCSHHHH---HHHHHHHCCTTEE
T ss_pred CEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCEEEEEecCCccchhcCHHHH---HHHHHHhCCCCee
Confidence 88644322210 0 011255666777777777654 4589999996 34454544 4455555655444
No 339
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=72.15 E-value=69 Score=30.51 Aligned_cols=145 Identities=15% Similarity=0.065 Sum_probs=91.9
Q ss_pred ceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 202 VKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 202 v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
+-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.+
T Consensus 26 v~~alv-TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~s 102 (315)
T 3si9_A 26 AVTALI-TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK--RVPVVAGAGSNS 102 (315)
T ss_dssp EEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSS
T ss_pred eeEeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCC
Confidence 434334 455 4677778888888999999999997444334444443455555556666676654 588999999986
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhH--------------------------HHHHHHHHHHcCCCc
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIM--------------------------CSAIKHFHKLSGKKI 334 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m--------------------------~~~v~~~~~~~~~~~ 334 (387)
+ ++-.+.++.|.++|+|.+=-.+=|... .|.+.+..- .+.+..+.+..++=+
T Consensus 103 t-~~ai~la~~A~~~Gadavlv~~P~y~~-~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIv 180 (315)
T 3si9_A 103 T-SEAVELAKHAEKAGADAVLVVTPYYNR-PNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNII 180 (315)
T ss_dssp H-HHHHHHHHHHHHTTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred H-HHHHHHHHHHHhcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEE
Confidence 6 455677899999999987665544221 232222111 123444545467779
Q ss_pred eEeEeccCCCHHHHHHHHH
Q psy10250 335 GLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 335 gIKasGGIrt~~~a~~~i~ 353 (387)
|||-|.| +..+..+++.
T Consensus 181 giKdssg--d~~~~~~l~~ 197 (315)
T 3si9_A 181 GVKDATG--KIERASEQRE 197 (315)
T ss_dssp EEEECSC--CTHHHHHHHH
T ss_pred EEEeCCC--CHHHHHHHHH
Confidence 9999865 4455555554
No 340
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=71.90 E-value=32 Score=30.94 Aligned_cols=126 Identities=9% Similarity=-0.029 Sum_probs=66.6
Q ss_pred HHHHHHCCCCeeeeecCch-hhhcCChhHHHHHHHHHHHHhCCCcceE---EEEeecc---CCC-h--------HHHHHH
Q psy10250 225 IELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMK---TILAVGE---LKT-S--------ENIYCA 288 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~-~lk~g~~~~v~~Ei~~v~~~~~~~~~lK---vIlEt~~---L~t-~--------e~i~~a 288 (387)
++.+.+.|.+-|++...-. .+...+.+ .+++.++++.+.. .-++ +..-.++ |.+ + +.+.++
T Consensus 18 l~~~~~~G~~~iEl~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~ 94 (287)
T 2x7v_A 18 PQDTVNIGGNSFQIFPHNARSWSAKLPS--DEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKE 94 (287)
T ss_dssp HHHHHHTTCSEEEECSCCCSSSCCCCCC--HHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCcccccccCCC--HHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHHHH
Confidence 5667788999999964211 11111111 2344445444432 1233 2222222 211 1 245667
Q ss_pred HHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHH-cCCCceEeEecc-----CCCHHHHHHHHH
Q psy10250 289 SMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKL-SGKKIGLKPAGG-----ISTFEDSVRWIY 353 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~-~~~~~gIKasGG-----Irt~~~a~~~i~ 353 (387)
.++|.+.|+.+|.+.+|+.....+.+....+.+.++.+.+. .|-++.+-.-.| +.|.+++..+++
T Consensus 95 i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 165 (287)
T 2x7v_A 95 VEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRD 165 (287)
T ss_dssp HHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHH
Confidence 88999999999999888653221222333344444444322 223444444333 268999999996
No 341
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=71.82 E-value=9.5 Score=37.65 Aligned_cols=78 Identities=17% Similarity=0.148 Sum_probs=51.6
Q ss_pred HHHHHHH-HcCCCEEEcCC--CC---------------C-CCCCChh-hhHhHHHHHHHHHHHcCC-CceEeEecc----
Q psy10250 287 CASMTAM-FAGSDFIKTST--GK---------------E-KTNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAGG---- 341 (387)
Q Consensus 287 ~a~~ia~-~aGaDfVKTST--Gf---------------~-~~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasGG---- 341 (387)
+|++.|. ++|.|.|+--- || . .+|.+++ ..+.+++-|+.+++.++. .++||.|..
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~ 257 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVH 257 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccc
Confidence 6888999 99999999421 11 0 1232543 445566677777888874 699999862
Q ss_pred -C---CCHHHHHHHHHHHHHhcCCCccC
Q psy10250 342 -I---STFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 342 -I---rt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
. -+.+++..+....+ .+|.+|++
T Consensus 258 ~~~~~~~~~~~~~la~~l~-~~Gvd~i~ 284 (379)
T 3aty_A 258 GMIDSNPEALTKHLCKKIE-PLSLAYLH 284 (379)
T ss_dssp GCCCSCHHHHHHHHHHHHG-GGCCSEEE
T ss_pred cCCCCCCHHHHHHHHHHHH-HhCCCEEE
Confidence 2 25677777766543 57998874
No 342
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=71.62 E-value=5.2 Score=39.43 Aligned_cols=190 Identities=12% Similarity=0.049 Sum_probs=0.0
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC
Q psy10250 138 TLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL 217 (387)
Q Consensus 138 ~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~ 217 (387)
.++|.+|+++|.+++++-. +.|+..--+.- ..-.|..+ +|.......
T Consensus 16 ~~~~~~~~~~~~~~~~~~~----------------~~g~~~~~~~g----------------~~~~~ig~-~g~~~~~~~ 62 (350)
T 1vr6_A 16 VLKPGSTEEDIRKVVKLAE----------------SYNLKCHISKG----------------QERTVIGI-IGDDRYVVA 62 (350)
T ss_dssp EECTTCCHHHHHHHHHHHH----------------HTTEEEEEEEC----------------SSCEEEEE-EEEESSCCH
T ss_pred EECCCCCHHHHHHHHHHHH----------------hCCCeEEEEec----------------CceEEEEE-ECCcCcCCH
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCC
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGa 297 (387)
...+.. .|++.+--|..--.+.+..+..-...+.-=--..+++ .+-||-|-|-..+.++..+.++.+.++|+
T Consensus 63 ~~~~~~-------~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~-~~~vIAgpcs~es~e~a~~~a~~~k~aGa 134 (350)
T 1vr6_A 63 DKFESL-------DCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNG-YFTIIAGPCSVEGREMLMETAHFLSELGV 134 (350)
T ss_dssp HHHHTS-------TTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTT-EEEEEEECSBCCCHHHHHHHHHHHHHTTC
T ss_pred HHhhCC-------ccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCC-CeEEEEeCCCcCCHHHHHHHHHHHHHcCC
Q ss_pred CEEEc------CCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCccee
Q psy10250 298 DFIKT------STGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRI 371 (387)
Q Consensus 298 DfVKT------STGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RI 371 (387)
|++|. +|-|+..|...+ ..+.+++.. .+.|+...-=+-+..++..+. .+ ++| .-|
T Consensus 135 ~~vr~q~fKprTs~~~f~glg~e-------gl~~l~~~~-~e~Gl~~~te~~d~~~~~~l~-----~~-vd~-----lkI 195 (350)
T 1vr6_A 135 KVLRGGAYKPRTSPYSFQGLGEK-------GLEYLREAA-DKYGMYVVTEALGEDDLPKVA-----EY-ADI-----IQI 195 (350)
T ss_dssp CEEECBSCCCCCSTTSCCCCTHH-------HHHHHHHHH-HHHTCEEEEECSSGGGHHHHH-----HH-CSE-----EEE
T ss_pred CeeeeeEEeCCCChHhhcCCCHH-------HHHHHHHHH-HHcCCcEEEEeCCHHHHHHHH-----Hh-CCE-----EEE
Q ss_pred eccchHHH-HHHHHhhC
Q psy10250 372 GASSLLNN-ILQELEAL 387 (387)
Q Consensus 372 GtSs~~~i-l~~~~~~~ 387 (387)
|+...-+. +.+++-++
T Consensus 196 gAr~~~n~~LL~~va~~ 212 (350)
T 1vr6_A 196 GARNAQNFRLLSKAGSY 212 (350)
T ss_dssp CGGGTTCHHHHHHHHTT
T ss_pred CcccccCHHHHHHHHcc
No 343
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=71.09 E-value=16 Score=33.85 Aligned_cols=120 Identities=9% Similarity=0.074 Sum_probs=67.4
Q ss_pred CCCeEEEEECC--------ccHHHHHHHhhhcCCCCCceEEEEecCCC----CCCCCHH-------HHHHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVYP--------ARVVDVIKVLDRENARDDVKVASVAAGFP----SGQYLLE-------TRLHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~P--------~~v~~a~~~L~~~~~~~~v~v~tVvigFP----~G~~~~e-------~K~~Ea~~Ai~~GA 233 (387)
+.||.+|-+.+ ..+...++.+++ .++++.+. .+|| ++....+ .=...++.|.+.|+
T Consensus 47 ~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~----~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~ 121 (309)
T 2hk0_A 47 KLGFDIIEVAAHHINEYSDAELATIRKSAKD----NGIILTAG-IGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDI 121 (309)
T ss_dssp HTTCSEEEEEHHHHTTSCHHHHHHHHHHHHH----TTCEEEEE-CCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCCEEEeccCCccccchhhHHHHHHHHHH----cCCeEEEe-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46777776653 235667777775 68999886 5775 2222222 12234567778899
Q ss_pred CeeeeecC--chhhhc------CChhHHHHHHHHHHHHhCCCcceEEEEeec------cCCChHHHHHHHHHHHHcCCCE
Q psy10250 234 DEVDIVIQ--RSLVLN------NQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDF 299 (387)
Q Consensus 234 dEID~Vin--~~~lk~------g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~t~e~i~~a~~ia~~aGaDf 299 (387)
+-|=+..+ .+.+.. ..|+.+.+-++++.+.+.. .-+++.||+. .+.+.+++ .+++.+.|.+.
T Consensus 122 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~~---~~l~~~v~~~~ 197 (309)
T 2hk0_A 122 HTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFAND-LGINLCIEVLNRFENHVLNTAAEG---VAFVKDVGKNN 197 (309)
T ss_dssp CEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHH-TTCEEEEECCCTTTCSSCCSHHHH---HHHHHHHTCTT
T ss_pred CEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHH-cCCEEEEeecccccccccCCHHHH---HHHHHHcCCCC
Confidence 97632110 133211 1234555566666666543 3489999985 34454444 44555556555
Q ss_pred EE
Q psy10250 300 IK 301 (387)
Q Consensus 300 VK 301 (387)
++
T Consensus 198 vg 199 (309)
T 2hk0_A 198 VK 199 (309)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 344
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=71.09 E-value=11 Score=37.01 Aligned_cols=79 Identities=10% Similarity=0.005 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCCEEEcCCC--C------CC--------CCCChh-hhHhHHHHHHHHHHHcCC-CceEeEec-----cC
Q psy10250 286 YCASMTAMFAGSDFIKTSTG--K------EK--------TNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAG-----GI 342 (387)
Q Consensus 286 ~~a~~ia~~aGaDfVKTSTG--f------~~--------~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasG-----GI 342 (387)
.+|++.|.++|.|.|.---| | ++ .|-+++ -.+..++-|+.+++.++. .++||.|+ |+
T Consensus 164 ~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~ 243 (361)
T 3gka_A 164 RRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTM 243 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSC
T ss_pred HHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCC
Confidence 35788899999999986433 2 11 133454 445566677777888875 89999997 33
Q ss_pred C---CHHHHHHHHHHHHHhcCCCccC
Q psy10250 343 S---TFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 343 r---t~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
. +.+++..+....+ .+|.+|++
T Consensus 244 ~~~~~~~~~~~la~~l~-~~Gvd~i~ 268 (361)
T 3gka_A 244 GDSDPAATFGHVARELG-RRRIAFLF 268 (361)
T ss_dssp CCSCHHHHHHHHHHHHH-HTTCSEEE
T ss_pred CCCCcHHHHHHHHHHHH-HcCCCEEE
Confidence 2 2556666665443 57998874
No 345
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=71.04 E-value=64 Score=29.63 Aligned_cols=164 Identities=15% Similarity=0.138 Sum_probs=98.4
Q ss_pred CCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHH-----------HHHhhhcCCCCCceEEEEecC
Q psy10250 142 DDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDV-----------IKVLDRENARDDVKVASVAAG 210 (387)
Q Consensus 142 ~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a-----------~~~L~~~~~~~~v~v~tVvig 210 (387)
++..++|+++.+--. +.+|..||+.+... ++.++-- .+ +|.+=+ .
T Consensus 7 tAn~~ei~~~~~~g~-------------------i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v---~G-~Vs~EV-~ 62 (223)
T 3s1x_A 7 TANIDEIRTGVNWGI-------------------VDGVTTNPTLISKEAVNGKKYGDIIREILKIV---DG-PVSVEV-V 62 (223)
T ss_dssp CCCHHHHHHHHHHTC-------------------CCEEECCHHHHHHHSCTTCCHHHHHHHHHHHC---SS-CEEEEC-C
T ss_pred cCCHHHHHHHHhcCC-------------------cccccCCHHHHHhhhccCCCHHHHHHHHHHhC---CC-CEEEEE-c
Confidence 456677777655432 47788888766654 2222211 11 343332 2
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHH
Q psy10250 211 FPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASM 290 (387)
Q Consensus 211 FP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ 290 (387)
...++.-+.|++...+.+ + .+||-+..-.+ =+++++.+...+..+-+= -.. +..|- .
T Consensus 63 ----a~d~e~mi~eA~~L~~~~-~--nv~IKIP~T~e--------Gl~A~~~L~~~GI~vn~T---lif-S~~QA----~ 119 (223)
T 3s1x_A 63 ----STKYEGMVEEARKIHGLG-D--NAVVKIPMTED--------GLRAIKTLSSEHINTNCT---LVF-NPIQA----L 119 (223)
T ss_dssp ----CCSHHHHHHHHHHHHHTC-T--TEEEEEESSHH--------HHHHHHHHHHTTCCEEEE---EEC-SHHHH----H
T ss_pred ----cCCHHHHHHHHHHHHHhC-C--CEEEEeCCCHH--------HHHHHHHHHHCCCcEEEE---EeC-CHHHH----H
Confidence 378999999999999997 2 36665554332 356666555443333222 234 54543 3
Q ss_pred HHHHcCCCEEEcCCCCCC--CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 291 TAMFAGSDFIKTSTGKEK--TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 291 ia~~aGaDfVKTSTGf~~--~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+|.+|||+||----|.-. +...+ . .+..+..+.+..+.+..|-++ .+|+..+..+.. .+|++
T Consensus 120 ~Aa~AGa~yISPfvgRi~d~g~dG~---~-~v~~i~~~~~~~~~~T~IlaA-S~Rn~~~v~~aa-----~~G~d 183 (223)
T 3s1x_A 120 LAAKAGVTYVSPFVGRLDDIGEDGM---Q-IIDMIRTIFNNYIIKTQILVA-SIRNPIHVLRSA-----VIGAD 183 (223)
T ss_dssp HHHHTTCSEEEEBSHHHHHTTSCTH---H-HHHHHHHHHHHTTCCSEEEEB-SCCSHHHHHHHH-----HHTCS
T ss_pred HHHHcCCeEEEeecchHhhcCCCHH---H-HHHHHHHHHHHcCCCCEEEEE-eCCCHHHHHHHH-----HcCCC
Confidence 477899999965444210 11112 2 235666666677888888885 799999999977 58985
No 346
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=70.93 E-value=35 Score=33.55 Aligned_cols=153 Identities=10% Similarity=0.049 Sum_probs=98.1
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
..+++... +|+. +..+.+.-..+++.+++.|.+-+.+=++. +.-.+-+++|+++.++. +.+.+....-
T Consensus 148 ~~v~~~~s-~g~~-~~~~~e~~~~~a~~~~~~G~~~iKlKv~~--------~~d~~~v~avR~a~G~~--~~L~vDaN~~ 215 (400)
T 3mwc_A 148 NYIESGAA-LGIP-EDGRIETLIHQVEESLQEGYRRIKIKIKP--------GWDVEPLQETRRAVGDH--FPLWTDANSS 215 (400)
T ss_dssp SEEEBCEE-ECCC-TTCCHHHHHHHHHHHHHHTCSCEEEECBT--------TBSHHHHHHHHHHHCTT--SCEEEECTTC
T ss_pred CeEEeeEE-eccC-CCCCHHHHHHHHHHHHHcCCCEEEEEeCc--------chHHHHHHHHHHhcCCC--CEEEEeCCCC
Confidence 34555444 2432 11236777888999999999988875532 22245678888888753 4566665333
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
=+.++ .+.++...+.|.+||--..- +++. +..+.+++.+ .+.|=+-.-+.+..++..++. .-
T Consensus 216 w~~~~-~~~~~~l~~~~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~----~~ 277 (400)
T 3mwc_A 216 FELDQ-WETFKAMDAAKCLFHEQPLH-------YEAL----LDLKELGERI--ETPICLDESLISSRVAEFVAK----LG 277 (400)
T ss_dssp CCGGG-HHHHHHHGGGCCSCEESCSC-------TTCH----HHHHHHHHHS--SSCEEESTTCCSHHHHHHHHH----TT
T ss_pred CCHHH-HHHHHHHHhcCCCEEeCCCC-------hhhH----HHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHh----cC
Confidence 25666 56777778889999985432 1111 3445555543 355666567899999999995 33
Q ss_pred CCCccCCCcceeec-cchHHHHHH
Q psy10250 360 GPDWLNKDLFRIGA-SSLLNNILQ 382 (387)
Q Consensus 360 Ga~w~~~~~~RIGt-Ss~~~il~~ 382 (387)
++++++++..|+|. +..+++..-
T Consensus 278 ~~d~v~~k~~~~GGit~~~~ia~~ 301 (400)
T 3mwc_A 278 ISNIWNIKIQRVGGLLEAIKIYKI 301 (400)
T ss_dssp CCSEEEECHHHHTSHHHHHHHHHH
T ss_pred CCCEEEEcchhhCCHHHHHHHHHH
Confidence 46778888888854 555555543
No 347
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=70.28 E-value=20 Score=33.74 Aligned_cols=192 Identities=10% Similarity=0.098 Sum_probs=122.0
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCCCC
Q psy10250 63 TILAVGELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLSGD 142 (387)
Q Consensus 63 vIlEt~~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~~~ 142 (387)
.+||.|.. +.+ .+..|.++|||-|-=.++...+|-||+....- ++.
T Consensus 2 ~~lEvc~~-s~~----~a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~------------------~~~----------- 47 (256)
T 1twd_A 2 ALLEICCY-SME----CALTAQQNGADRVELCAAPKEGGLTPSLGVLK------------------SVR----------- 47 (256)
T ss_dssp CEEEEEES-SHH----HHHHHHHTTCSEEEECBCGGGTCBCCCHHHHH------------------HHH-----------
T ss_pred ceEEEEeC-CHH----HHHHHHHcCCCEEEEcCCcccCCCCCCHHHHH------------------HHH-----------
Confidence 35899876 533 45577889999999999988888877732221 111
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHH
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRL 222 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~ 222 (387)
+.. ... --|.|.|.. -+|-....-.+.-.
T Consensus 48 -----------~~~----------------~ip-v~vMIRPR~-----------------------GdF~Ys~~E~~~M~ 76 (256)
T 1twd_A 48 -----------QRV----------------TIP-VHPIIRPRG-----------------------GDFCYSDGEFAAIL 76 (256)
T ss_dssp -----------HHC----------------CSC-EEEBCCSSS-----------------------SCSCCCHHHHHHHH
T ss_pred -----------HHc----------------CCc-eEEEECCCC-----------------------CCCcCCHHHHHHHH
Confidence 111 111 236666621 26777777788888
Q ss_pred HHHHHHHHCCCCeeeeecCchhhh-cCChhHHHHHHHHHHHHhCCCcceEEEEeecc--CCChHHHHHHHHHHHHcCCCE
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVL-NNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--LKTSENIYCASMTAMFAGSDF 299 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk-~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~--L~t~e~i~~a~~ia~~aGaDf 299 (387)
.+++.+.+.|||.+ | +|.|. +|..|. +-++++.+++++ +.|.+=-.. ..+ ..+|-+..++.|.+-
T Consensus 77 ~Di~~~~~~GadGv--V--~G~Lt~dg~iD~--~~~~~Li~~a~~---~~vTFHRAfD~~~d---~~~ale~L~~lG~~r 144 (256)
T 1twd_A 77 EDVRTVRELGFPGL--V--TGVLDVDGNVDM--PRMEKIMAAAGP---LAVTFHRAFDMCAN---PLYTLNNLAELGIAR 144 (256)
T ss_dssp HHHHHHHHTTCSEE--E--ECCBCTTSSBCH--HHHHHHHHHHTT---SEEEECGGGGGCSC---HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHcCCCEE--E--EeeECCCCCcCH--HHHHHHHHHhCC---CcEEEECchhccCC---HHHHHHHHHHcCCCE
Confidence 99999999999985 3 34443 444443 335566677764 556654432 222 346788888999999
Q ss_pred EEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 300 IKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 300 VKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
|=||=|.......+ +.++.+.+..+ ++.|-+-|||+.-+-. .++ ..|..|+.
T Consensus 145 ILTSG~~~~a~~g~-------~~L~~Lv~~a~-~i~Im~GgGv~~~Ni~-~l~-----~tGv~e~H 196 (256)
T 1twd_A 145 VLTSGQKSDALQGL-------SKIMELIAHRD-APIIMAGAGVRAENLH-HFL-----DAGVLEVH 196 (256)
T ss_dssp EEECTTSSSTTTTH-------HHHHHHHTSSS-CCEEEEESSCCTTTHH-HHH-----HHTCSEEE
T ss_pred EECCCCCCCHHHHH-------HHHHHHHHhhC-CcEEEecCCcCHHHHH-HHH-----HcCCCeEe
Confidence 99998753222222 34555555555 8999999999764433 333 37887775
No 348
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=70.13 E-value=75 Score=30.09 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=68.3
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.++.+ -.+
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~-ai~ 94 (309)
T 3fkr_A 18 TTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYSTQV-CAA 94 (309)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHH-HHH
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchHHH-HHH
Confidence 445 4677778888888999999999986544445544444455555556666666654 578999999986644 557
Q ss_pred HHHHHHHcCCCEEEcCCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf 306 (387)
.++.|.++|+|.+=--+-|
T Consensus 95 la~~A~~~Gadavlv~~Py 113 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPY 113 (309)
T ss_dssp HHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHcCCCEEEEcCCC
Confidence 7899999999998776655
No 349
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=69.99 E-value=73 Score=29.89 Aligned_cols=95 Identities=13% Similarity=-0.003 Sum_probs=67.4
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .++||.=++-.++ ++-.+
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 89 (294)
T 3b4u_A 13 TPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSI-EDAAD 89 (294)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccH-HHHHH
Confidence 455 4577778888888999999999986544444444444455555555666666654 5789999999866 45567
Q ss_pred HHHHHHHcCCCEEEcCCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf 306 (387)
.++.|.++|+|.+=-.+-|
T Consensus 90 la~~A~~~Gadavlv~~P~ 108 (294)
T 3b4u_A 90 QSAEALNAGARNILLAPPS 108 (294)
T ss_dssp HHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHhcCCCEEEEcCCc
Confidence 7888999999988766654
No 350
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.58 E-value=32 Score=31.15 Aligned_cols=121 Identities=14% Similarity=0.044 Sum_probs=69.3
Q ss_pred CCCeEEEEECCc----cHHHHHHHhhhcCCCCCceEEEEecCCCC--CCCCHH-------HHHHHHHHHHHCCCCeeeee
Q psy10250 173 NVHTAAVCVYPA----RVVDVIKVLDRENARDDVKVASVAAGFPS--GQYLLE-------TRLHEIELLAKQKVDEVDIV 239 (387)
Q Consensus 173 ~~~~~aVcV~P~----~v~~a~~~L~~~~~~~~v~v~tVvigFP~--G~~~~e-------~K~~Ea~~Ai~~GAdEID~V 239 (387)
++||.+|-+.+. .+...++.++. .++++.++..+||. +....+ .=...++.|.+.|++-|=+.
T Consensus 49 ~~G~~~vEl~~~~~~~~~~~~~~~l~~----~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~ 124 (287)
T 3kws_A 49 KLGVVGFEPGGGGLAGRVNEIKQALNG----RNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIV 124 (287)
T ss_dssp HTTCCEEECBSTTCGGGHHHHHHHHTT----SSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HcCCCEEEecCCchHHHHHHHHHHHHH----cCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 567777776654 46667777774 68998766334432 112222 11234667778899986443
Q ss_pred cCchhh------hcCChhHHHHHHHHHHHHhCCCcceEEEEeec------cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 240 IQRSLV------LNNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 240 in~~~l------k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..++.. ....|+.+.+-++++.+.+.. .-+++-+|+. .+.+.+++ .++..+.|.+.++
T Consensus 125 ~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~~~~~---~~ll~~v~~~~vg 194 (287)
T 3kws_A 125 PAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQ-HGTSVIFEPLNRKECFYLRQVADA---ASLCRDINNPGVR 194 (287)
T ss_dssp SCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHH-TTCCEEECCCCTTTCSSCCCHHHH---HHHHHHHCCTTEE
T ss_pred cCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEecCcccCcccCCHHHH---HHHHHHcCCCCee
Confidence 333221 112345566667777766644 3489999953 35454544 4555666666554
No 351
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=69.19 E-value=17 Score=33.19 Aligned_cols=130 Identities=12% Similarity=-0.020 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCc-----cHHHHHHHhhhcCCCCCceEEEEecCCCC------
Q psy10250 145 EAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPA-----RVVDVIKVLDRENARDDVKVASVAAGFPS------ 213 (387)
Q Consensus 145 ~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~-----~v~~a~~~L~~~~~~~~v~v~tVvigFP~------ 213 (387)
..++.+.++.+. ++||.+|-+.+. .+...++.++. .++++.++-.++|.
T Consensus 40 ~~~~~~~l~~~~----------------~~G~~~vEl~~~~~~~~~~~~~~~~l~~----~gl~~~~~~~~~p~~~~~~~ 99 (290)
T 2zvr_A 40 KGDLRKGMELAK----------------RVGYQAVEIAVRDPSIVDWNEVKILSEE----LNLPICAIGTGQAYLADGLS 99 (290)
T ss_dssp HHHHHHHHHHHH----------------HHTCSEEEEECSCGGGSCHHHHHHHHHH----HTCCEEEEECTHHHHTTCCC
T ss_pred ccCHHHHHHHHH----------------HhCCCEEEEcCCCcchhhHHHHHHHHHH----cCCeEEEEeccCccccCCCC
Confidence 456777777777 567888777543 56778888875 58888777332243
Q ss_pred -CCCCH-------HHHHHHHHHHHHCCCCeeeeecCchhhh----cCChhHHHHHHHHHHHHhCCCcceEEEEeec----
Q psy10250 214 -GQYLL-------ETRLHEIELLAKQKVDEVDIVIQRSLVL----NNQWPELFSEVKQMKEKCGEKIHMKTILAVG---- 277 (387)
Q Consensus 214 -G~~~~-------e~K~~Ea~~Ai~~GAdEID~Vin~~~lk----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---- 277 (387)
+.... +.=...++.|.+.|++-|= +...|..- ...|+.+.+-++++.+.+.. +++-||+.
T Consensus 100 l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~---v~l~lEn~~~~~ 175 (290)
T 2zvr_A 100 LTHPNDEIRKKAIERVVKHTEVAGMFGALVII-GLVRGRREGRSYEETEELFIESMKRLLELTEH---AKFVIEPLNRYE 175 (290)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE-SGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSS---CCEEECCCCTTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ecCCCCCCCcCHHHHHHHHHHHHHHHHHHhcc---CEEEEEeCCCcC
Confidence 11111 1122335566778987642 22123211 11234555666666666643 89999984
Q ss_pred --cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 278 --ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 278 --~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
.+.+.++ +.+++.+.|.+.++
T Consensus 176 ~~~~~~~~~---~~~l~~~~~~~~vg 198 (290)
T 2zvr_A 176 TDFINTIDD---ALRILRKINSNRVG 198 (290)
T ss_dssp CSSCCSHHH---HHHHHHHHCCTTEE
T ss_pred ccccCCHHH---HHHHHHHcCCCCEE
Confidence 4445444 44555555655443
No 352
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=69.14 E-value=7.1 Score=34.37 Aligned_cols=70 Identities=16% Similarity=0.168 Sum_probs=41.1
Q ss_pred HHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEecC
Q psy10250 15 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIKTS 94 (387)
Q Consensus 15 E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvKTS 94 (387)
.++.+.+.|||-+=+. .. .+ .+.+..+++.++. .-+++++|.--..+. ....+.+.+.|+|||.+.
T Consensus 69 ~~~~~~~~Gad~v~v~--~~---~~-----~~~~~~~~~~~~~-~g~~~~v~~~~~~t~---~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVL--GV---TD-----VLTIQSCIRAAKE-AGKQVVVDMICVDDL---PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEE--TT---SC-----HHHHHHHHHHHHH-HTCEEEEECTTCSSH---HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEe--CC---CC-----hhHHHHHHHHHHH-cCCeEEEEecCCCCH---HHHHHHHHHcCCCEEEEc
Confidence 4889999999865332 11 11 2344555555543 236888873212232 223455678899999987
Q ss_pred CCCC
Q psy10250 95 TGKE 98 (387)
Q Consensus 95 TG~~ 98 (387)
+||.
T Consensus 135 ~g~~ 138 (211)
T 3f4w_A 135 TGTD 138 (211)
T ss_dssp CCHH
T ss_pred CCCc
Confidence 7753
No 353
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=69.07 E-value=19 Score=36.03 Aligned_cols=86 Identities=17% Similarity=0.243 Sum_probs=57.7
Q ss_pred cCCChHHHHH-------HHHHHHHcCCCEEEcCCC--C------CC--------CCCCh-h-hhHhHHHHHHHHHHHc--
Q psy10250 278 ELKTSENIYC-------ASMTAMFAGSDFIKTSTG--K------EK--------TNATI-P-AGIIMCSAIKHFHKLS-- 330 (387)
Q Consensus 278 ~L~t~e~i~~-------a~~ia~~aGaDfVKTSTG--f------~~--------~gat~-~-~~~~m~~~v~~~~~~~-- 330 (387)
.| |.++|.. |++.|.+||.|.|----| | ++ .|-++ + -.+..++-|+.+++.+
T Consensus 159 ~m-t~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~ 237 (419)
T 3l5a_A 159 AM-SHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDK 237 (419)
T ss_dssp EC-CHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhh
Confidence 46 5566654 788899999999876433 2 11 23344 2 3445556666666666
Q ss_pred --CC--CceEeEec--------cCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 331 --GK--KIGLKPAG--------GISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 331 --~~--~~gIKasG--------GIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+. .++||.|. |+ +.++...+....++.+|.++|+
T Consensus 238 ~~~~~f~v~vRis~~~~~~~~~G~-~~ed~~~la~~L~~~~Gvd~I~ 283 (419)
T 3l5a_A 238 EAPDNFILGFRATPEETRGSDLGY-TIDEFNQLIDWVMDVSNIQYLA 283 (419)
T ss_dssp HCCTTCEEEEEECSCEEETTEEEE-CHHHHHHHHHHHHHHSCCCCEE
T ss_pred hcCCCeeEEEecccccccCCCCCC-CHHHHHHHHHHHHhhcCCcEEE
Confidence 33 59999987 55 5788888887776658998884
No 354
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=69.04 E-value=37 Score=30.31 Aligned_cols=132 Identities=13% Similarity=0.096 Sum_probs=79.5
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeecc
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE 278 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~ 278 (387)
..++++.- .|.+...+.+. -++.+.+.|.+-|++.... + . ++.-.++++++++.+.. .-+++. +-...
T Consensus 16 ~~~klg~~--~~~~~~~~~~~---~l~~~~~~G~~~vEl~~~~--~-~--~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~ 84 (257)
T 3lmz_A 16 NPFHLGMA--GYTFVNFDLDT---TLKTLERLDIHYLCIKDFH--L-P--LNSTDEQIRAFHDKCAA-HKVTGYAVGPIY 84 (257)
T ss_dssp CSSEEEEC--GGGGTTSCHHH---HHHHHHHTTCCEEEECTTT--S-C--TTCCHHHHHHHHHHHHH-TTCEEEEEEEEE
T ss_pred CceEEEEE--EEeecCCCHHH---HHHHHHHhCCCEEEEeccc--C-C--CCCCHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 45777544 55555555543 3556667899999998761 2 1 11122344445444432 113332 22222
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEec----cCCCHHHHHHHHH
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAG----GISTFEDSVRWIY 353 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasG----GIrt~~~a~~~i~ 353 (387)
..+.+.+.++.+.|.+.|+.+|...+| .+. ++.+..+.+..|-++.+-.-+ -+.|.+++..++.
T Consensus 85 ~~~~~~~~~~i~~A~~lGa~~v~~~p~-------~~~----l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 85 MKSEEEIDRAFDYAKRVGVKLIVGVPN-------YEL----LPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp ECSHHHHHHHHHHHHHHTCSEEEEEEC-------GGG----HHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEecCC-------HHH----HHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 346688999999999999999997654 121 233444445556677777764 2578999999883
No 355
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.96 E-value=59 Score=28.40 Aligned_cols=119 Identities=14% Similarity=0.199 Sum_probs=65.6
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
+..++..++ .|. ..+.=...++.+.+.|++-|-+...- .+ ..+.++++++..+ +.+|+-.+..
T Consensus 5 ~~~~i~~~i----~~~-d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~-~~~~i~~i~~~~~----~~l~vg~g~~ 67 (212)
T 2v82_A 5 TKLPLIAIL----RGI-TPDEALAHVGAVIDAGFDAVEIPLNS-------PQ-WEQSIPAIVDAYG----DKALIGAGTV 67 (212)
T ss_dssp SSSCEEEEC----TTC-CHHHHHHHHHHHHHHTCCEEEEETTS-------TT-HHHHHHHHHHHHT----TTSEEEEECC
T ss_pred CCCCEEEEE----eCC-CHHHHHHHHHHHHHCCCCEEEEeCCC-------hh-HHHHHHHHHHhCC----CCeEEEeccc
Confidence 456676664 222 34444666888888999988775432 11 1345566655443 2334422223
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhc
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 359 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~ 359 (387)
.+.+. .+.+.++|+|||- .|. ...+ -++. .+..+ .+..-|++|.+++.... .+
T Consensus 68 ~~~~~----i~~a~~~Gad~V~--~~~----~~~~-------~~~~-~~~~g----~~~~~g~~t~~e~~~a~-----~~ 120 (212)
T 2v82_A 68 LKPEQ----VDALARMGCQLIV--TPN----IHSE-------VIRR-AVGYG----MTVCPGCATATEAFTAL-----EA 120 (212)
T ss_dssp CSHHH----HHHHHHTTCCEEE--CSS----CCHH-------HHHH-HHHTT----CEEECEECSHHHHHHHH-----HT
T ss_pred cCHHH----HHHHHHcCCCEEE--eCC----CCHH-------HHHH-HHHcC----CCEEeecCCHHHHHHHH-----HC
Confidence 24443 4678899999995 221 1121 1222 22223 33223489999987776 58
Q ss_pred CCC
Q psy10250 360 GPD 362 (387)
Q Consensus 360 Ga~ 362 (387)
|++
T Consensus 121 G~d 123 (212)
T 2v82_A 121 GAQ 123 (212)
T ss_dssp TCS
T ss_pred CCC
Confidence 985
No 356
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=68.51 E-value=83 Score=29.93 Aligned_cols=146 Identities=14% Similarity=0.028 Sum_probs=95.3
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+.+ .+.||.=++-.
T Consensus 27 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~ 103 (315)
T 3na8_A 27 GIIGYTI-TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH--RVPTIVSVSDL 103 (315)
T ss_dssp EEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCS
T ss_pred ceEEEee-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCC
Confidence 3444444 555 4677778888888999999999986544445544444455555566666676654 48899999988
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKK 333 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~ 333 (387)
++ ++..+.++.|.++|+|.+=-.+=|... .|.+....-+ +.++.+....++=
T Consensus 104 ~t-~~ai~la~~A~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnI 181 (315)
T 3na8_A 104 TT-AKTVRRAQFAESLGAEAVMVLPISYWK-LNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNV 181 (315)
T ss_dssp SH-HHHHHHHHHHHHTTCSEEEECCCCSSC-CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTE
T ss_pred CH-HHHHHHHHHHHhcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCE
Confidence 66 456677899999999988776654321 2332222211 2333442335777
Q ss_pred ceEeEeccCCCHHHHHHHHH
Q psy10250 334 IGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 334 ~gIKasGGIrt~~~a~~~i~ 353 (387)
+|||-|.| +..+..+++.
T Consensus 182 vgiKdssg--d~~~~~~~~~ 199 (315)
T 3na8_A 182 TMVKESTG--DIQRMHKLRL 199 (315)
T ss_dssp EEEEECSS--CHHHHHHHHH
T ss_pred EEEECCCC--CHHHHHHHHH
Confidence 99999877 5666666664
No 357
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=68.36 E-value=69 Score=31.17 Aligned_cols=151 Identities=9% Similarity=0.032 Sum_probs=95.6
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 280 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~ 280 (387)
.+++... ++ ..+.+.-+.+++.+++.|.+-+-+=+.. ++.+.-.+-+++|+++. + -+.+.+....-=
T Consensus 137 ~v~~~~t-~~----~~~~~~~~~~a~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~a~-~--~~~l~vDan~~~ 203 (385)
T 3i6e_A 137 TIPLSCS-IA----NPDFDADIALMERLRADGVGLIKLKTGF-----RDHAFDIMRLELIARDF-P--EFRVRVDYNQGL 203 (385)
T ss_dssp EEEBEEE-EC----CSSHHHHHHHHHHHHHHTCCEEEEECSS-----SCHHHHHHHHHHHHHHC-T--TSEEEEECTTCC
T ss_pred ceEEEEE-cC----CCCHHHHHHHHHHHHHcCCCEEEEecCC-----CCHHHHHHHHHHHHHhC-C--CCeEEEECCCCC
Confidence 4555444 24 3356666788999999999988764421 23455566678888888 4 256777754333
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 360 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G 360 (387)
+.++-.+.++...+.|.+||--+.. +++. +..+.+++. ..+.|=+-.-+.+..++..++. .-+
T Consensus 204 ~~~~A~~~~~~L~~~~i~~iEqP~~-------~~d~----~~~~~l~~~--~~iPIa~dE~~~~~~~~~~~~~----~~~ 266 (385)
T 3i6e_A 204 EIDEAVPRVLDVAQFQPDFIEQPVR-------AHHF----ELMARLRGL--TDVPLLADESVYGPEDMVRAAH----EGI 266 (385)
T ss_dssp CGGGHHHHHHHHHTTCCSCEECCSC-------TTCH----HHHHHHHTT--CSSCEEESTTCCSHHHHHHHHH----HTC
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCC-------cccH----HHHHHHHHh--CCCCEEEeCCcCCHHHHHHHHH----cCC
Confidence 5666667777788889999985442 1211 233444332 2344544456899999999985 345
Q ss_pred CCccCCCcceeec-cchHHHHH
Q psy10250 361 PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 361 a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
++.++++..|+|. +..+++..
T Consensus 267 ~d~v~~k~~~~GGit~~~~i~~ 288 (385)
T 3i6e_A 267 CDGVSIKIMKSGGLTRAQTVAR 288 (385)
T ss_dssp CSEEEECHHHHTSHHHHHHHHH
T ss_pred CCEEEecccccCCHHHHHHHHH
Confidence 6777888888864 55555544
No 358
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=68.35 E-value=50 Score=31.55 Aligned_cols=130 Identities=12% Similarity=0.095 Sum_probs=77.8
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee---ccCCChHHHHHH---HHHHHHc
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV---GELKTSENIYCA---SMTAMFA 295 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt---~~L~t~e~i~~a---~~ia~~a 295 (387)
+..+..|.+.|||-|.++=| +..|....=...++.+++.. + .++.|+|-- .++=+++|+... .+.+.++
T Consensus 49 ~~~a~~A~~gGAdRIELc~~---l~~GGlTPS~g~i~~a~~~~-~-ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~ 123 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSG---LSEGGTTPSMGVLQVVKQSV-Q-IPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLY 123 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBC---GGGTCBCCCHHHHHHHHTTC-C-SCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC---CCCCCCCCCHHHHHHHHHhc-C-CCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHc
Confidence 45788899999999999944 44566666667777777644 3 789999964 344466666654 5678999
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC-CceEeEe-ccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK-KIGLKPA-GGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~-~~gIKas-GGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt 373 (387)
|+|.|-- |+-....+++. +..+.+.+..++ .+-+--+ =-++++.+|++.+. .+|. .||=|
T Consensus 124 GAdGvVf--G~L~~dg~iD~-----~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li----~lGv-------drILT 185 (287)
T 3iwp_A 124 GADGLVF--GALTEDGHIDK-----ELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLL----TLGF-------ERVLT 185 (287)
T ss_dssp TCSEEEE--CCBCTTSCBCH-----HHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHH----HHTC-------SEEEE
T ss_pred CCCEEEE--eeeCCCCCcCH-----HHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHH----HcCC-------CEEEC
Confidence 9998863 33112222321 233333333322 2222222 34456777777764 4576 57755
Q ss_pred c
Q psy10250 374 S 374 (387)
Q Consensus 374 S 374 (387)
|
T Consensus 186 S 186 (287)
T 3iwp_A 186 S 186 (287)
T ss_dssp C
T ss_pred C
Confidence 5
No 359
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=68.31 E-value=79 Score=29.62 Aligned_cols=130 Identities=16% Similarity=0.056 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 296 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG 296 (387)
..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.++ ++-.+.++.|.++|
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~la~~a~~~G 97 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK--RVPVIAGTGTNDT-EKSIQASIQAKALG 97 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCH-HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccH-HHHHHHHHHHHHcC
Confidence 34555566888999999997443334444433345555555666666654 5889999998866 45667789999999
Q ss_pred CCEEEcCCCCCCCCCChhhhHhHHH--------------------------HHHHHHHHcCCCceEeEeccCCCHHHHHH
Q psy10250 297 SDFIKTSTGKEKTNATIPAGIIMCS--------------------------AIKHFHKLSGKKIGLKPAGGISTFEDSVR 350 (387)
Q Consensus 297 aDfVKTSTGf~~~gat~~~~~~m~~--------------------------~v~~~~~~~~~~~gIKasGGIrt~~~a~~ 350 (387)
+|.+=-.+-|... .|.+....-++ .+..+.+ .++=+|||-|.| +..+..+
T Consensus 98 adavlv~~P~y~~-~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivgiK~ssg--d~~~~~~ 173 (292)
T 3daq_A 98 ADAIMLITPYYNK-TNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIVALKDATN--DFEYLEE 173 (292)
T ss_dssp CSEEEEECCCSSC-CCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT-STTEEEEEECCC--CHHHHHH
T ss_pred CCEEEECCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc-CCCEEEEEeCCC--CHHHHHH
Confidence 9988766654222 23332222222 2333333 567789999877 6677666
Q ss_pred HHH
Q psy10250 351 WIY 353 (387)
Q Consensus 351 ~i~ 353 (387)
++.
T Consensus 174 ~~~ 176 (292)
T 3daq_A 174 VKK 176 (292)
T ss_dssp HHT
T ss_pred HHH
Confidence 663
No 360
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=68.04 E-value=90 Score=30.16 Aligned_cols=142 Identities=8% Similarity=0.036 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++|+++.++. +.+.+....=-+.++-.+.++...+.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~~~g~~--~~l~vDan~~~~~~~a~~~~~~l~~~ 223 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGH-----DDPNIDIARLTAVRERVDSA--VRIAIDGNGKWDLPTCQRFCAAAKDL 223 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCC-----SSHHHHHHHHHHHHHHSCTT--CEEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCC-----CCHHHHHHHHHHHHHHcCCC--CcEEeeCCCCCCHHHHHHHHHHHhhc
Confidence 577778889999999 99988764321 23455566778888888753 45666654322567666777777788
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--+.- +++. +..+.+++.+ .+.|=+-+.+.+..++..++. .-.+++++++..|+|. +
T Consensus 224 ~i~~iEqP~~-------~~d~----~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~~~d~v~~k~~~~GGit 286 (372)
T 3tj4_A 224 DIYWFEEPLW-------YDDV----TSHARLARNT--SIPIALGEQLYTVDAFRSFID----AGAVAYVQPDVTRLGGIT 286 (372)
T ss_dssp CEEEEESCSC-------TTCH----HHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH----TTCCSEECCCTTTTTHHH
T ss_pred CCCEEECCCC-------chhH----HHHHHHHhhc--CCCEEeCCCccCHHHHHHHHH----cCCCCEEEeCccccCCHH
Confidence 9999985442 1211 3445555543 356666667999999999995 3347888999999964 5
Q ss_pred chHHHHHH
Q psy10250 375 SLLNNILQ 382 (387)
Q Consensus 375 s~~~il~~ 382 (387)
.++++..-
T Consensus 287 ~~~~ia~~ 294 (372)
T 3tj4_A 287 EYIQVADL 294 (372)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56655543
No 361
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=67.99 E-value=24 Score=32.42 Aligned_cols=128 Identities=13% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCeeeee-cCchhhhcCChhHHHHHH-----------------HHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 222 LHEIELLAKQKVDEVDIV-IQRSLVLNNQWPELFSEV-----------------KQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~V-in~~~lk~g~~~~v~~Ei-----------------~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
+..++...+.||+|+=+| ++-..-.......+.+++ ..+.+.... ..=|||+-|..+.+++
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~-GadkVii~t~a~~~p~ 112 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDC-GVKRVVIGSMAIKDAT 112 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHT-TCSEEEECTTTTTCHH
T ss_pred HHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHc-CCCEEEEccccccCCc
Q ss_pred HHHHHHHH----HHHcCCCE-------EEcCCCCCCCCCChhhhHh------------------------HHHHHHHHHH
Q psy10250 284 NIYCASMT----AMFAGSDF-------IKTSTGKEKTNATIPAGII------------------------MCSAIKHFHK 328 (387)
Q Consensus 284 ~i~~a~~i----a~~aGaDf-------VKTSTGf~~~gat~~~~~~------------------------m~~~v~~~~~ 328 (387)
.+.+++.. ++-.+.|+ |.|..|....+-++.+... -++-++.+.+
T Consensus 113 li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~ 192 (243)
T 4gj1_A 113 LCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHE 192 (243)
T ss_dssp HHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHH
T ss_pred hHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHH
Q ss_pred HcCCCceEeEeccCCCHHHHHHH
Q psy10250 329 LSGKKIGLKPAGGISTFEDSVRW 351 (387)
Q Consensus 329 ~~~~~~gIKasGGIrt~~~a~~~ 351 (387)
.. .++.|=+|||++++++...+
T Consensus 193 ~~-~~ipviasGGv~~~~Dl~~l 214 (243)
T 4gj1_A 193 IF-PNICIQASGGVASLKDLENL 214 (243)
T ss_dssp HC-TTSEEEEESCCCSHHHHHHT
T ss_pred hc-CCCCEEEEcCCCCHHHHHHH
No 362
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=67.90 E-value=1.1e+02 Score=34.74 Aligned_cols=197 Identities=12% Similarity=0.121 Sum_probs=116.6
Q ss_pred CCHHHHHHHHHHHHHcCCC--eeee----ecc--hhHHhcCChhHHHHHHHHHHHHcccCccEEEEEec----cCCC-CH
Q psy10250 7 YLLETRLHEIELLAKQKVD--EVDI----VIQ--RSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAV----GELK-TS 73 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~--EiD~----Vin--~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt----~~L~-~~ 73 (387)
.+++-|+.=++...+.|.+ +|++ -.+ +..+.+.+|+.+++ +.+..++ ..+-+++-. ||-. .+
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~----~~~~~~~-~~~~~l~R~~n~vg~~~~~~ 644 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLAL----IREGAPN-LLLQMLLRGANGVGYTNYPD 644 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHH----HHHHCTT-SEEEEEEETTTBTCSSCCCH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHH----HHHHchh-hHHHHHhccccccccccCCc
Confidence 6789999999999999644 5786 223 33556677776654 4444443 445444431 3321 12
Q ss_pred HHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcc----cccc--cCCCC---CC
Q psy10250 74 ENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEF----IDLT--TLSGD---DT 144 (387)
Q Consensus 74 e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----ID~T--~L~~~---~T 144 (387)
.-+..-.+.+.++|+|.+.-... ++ + +..++.-...+++.-.. |-+| ...|. .+
T Consensus 645 ~~~~~~i~~a~~~g~d~irif~s-------l~----~------~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~ 707 (1165)
T 2qf7_A 645 NVVKYFVRQAAKGGIDLFRVFDC-------LN----W------VENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYD 707 (1165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECT-------TC----C------GGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGC
T ss_pred hhHHHHHHHHHhcCcCEEEEEee-------HH----H------HHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCC
Confidence 23344566778889999776321 11 1 11223333344443322 2233 23433 57
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC-------CccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC
Q psy10250 145 EAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY-------PARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL 217 (387)
Q Consensus 145 ~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~-------P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~ 217 (387)
.+.+.++++++. +.|...||+. |..+....+.|+.. .++.+ +| |...+
T Consensus 708 ~~~~~~~~~~~~----------------~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~---~~~~i-----~~-H~Hnd 762 (1165)
T 2qf7_A 708 LKYYTNLAVELE----------------KAGAHIIAVKDMAGLLKPAAAKVLFKALREA---TGLPI-----HF-HTHDT 762 (1165)
T ss_dssp HHHHHHHHHHHH----------------HTTCSEEEEEETTCCCCHHHHHHHHHHHHHH---CSSCE-----EE-EECBT
T ss_pred HHHHHHHHHHHH----------------HcCCCEEEEeCccCCcCHHHHHHHHHHHHHh---cCCeE-----EE-EECCC
Confidence 888889988888 6788888875 77766666666542 23332 44 34445
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecCchhhhcCCh
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQW 250 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~ 250 (387)
...=++-+..|++.||+-||.-+|==.-..||-
T Consensus 763 ~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~ 795 (1165)
T 2qf7_A 763 SGIAAATVLAAVEAGVDAVDAAMDALSGNTSQP 795 (1165)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCC
T ss_pred CCHHHHHHHHHHHhCCCEEEecccccCCCccch
Confidence 555677888999999999999998322234544
No 363
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=67.71 E-value=19 Score=33.12 Aligned_cols=157 Identities=11% Similarity=0.107 Sum_probs=89.3
Q ss_pred EEECCccHHHHHHHhhhcCCCCCceEEE--EecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHH
Q psy10250 179 VCVYPARVVDVIKVLDRENARDDVKVAS--VAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSE 256 (387)
Q Consensus 179 VcV~P~~v~~a~~~L~~~~~~~~v~v~t--VvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~E 256 (387)
+|-+..++..+++.+ +++|.+ + --+..|..|=++-.. ++.+.||+-+=+--.-.. ....|
T Consensus 41 ~~p~~~~L~~v~~~~-------~i~v~aQdv-~~~~~Ga~TGeis~~---~l~~~Ga~~VllghseRR-------~~~~e 102 (226)
T 1w0m_A 41 VAPNHLELGLVSQSV-------DIPVYAQGA-DVEAGGAHTAHVSLE---NIKEAGGSGVILNHSEAP-------LKLND 102 (226)
T ss_dssp EECCGGGHHHHHTTC-------SSCBEESCC-SBSSCSSCTTCCBHH---HHHHHTCCEEEECCTTSC-------CBHHH
T ss_pred EeCCHHHHHHHHHhc-------CCceEeeEC-ChhhCCCccCCCCHH---HHHHcCCCEEEEeeeecc-------CCHHH
Confidence 444445777776543 122222 2 234556666655554 445678886543322211 22235
Q ss_pred HHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE------cCCCCCCCCCChhhhHhHHHHHHHHHHHc
Q psy10250 257 VKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK------TSTGKEKTNATIPAGIIMCSAIKHFHKLS 330 (387)
Q Consensus 257 i~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK------TSTGf~~~gat~~~~~~m~~~v~~~~~~~ 330 (387)
+.+..+.+.. .-+++|+|.+.- ++... +...+++.|= ..||-.-..+|++++..+.+.+|. .
T Consensus 103 ~~~k~~~A~~-~GL~~ivcVge~---~e~~~----~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~----~ 170 (226)
T 1w0m_A 103 LARLVAKAKS-LGLDVVVCAPDP---RTSLA----AAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSR----H 170 (226)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSH---HHHHH----HHHTCCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHHH-CCCEEEEEeCCH---HHHHH----HhcCCCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHh----c
Confidence 6776666654 459999999965 23322 3455776552 122210013556655555544443 3
Q ss_pred CCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccc
Q psy10250 331 GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 375 (387)
Q Consensus 331 ~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs 375 (387)
...+.|=.-|||++.+++..+. ..|.| .+-||.++
T Consensus 171 ~~~~~ilyggsV~~~n~~~~~~-----~~giD-----G~LVG~a~ 205 (226)
T 1w0m_A 171 FPEVSVITGAGIESGDDVAAAL-----RLGTR-----GVLLASAA 205 (226)
T ss_dssp CTTSEEEEESSCCSHHHHHHHH-----HTTCS-----EEEECHHH
T ss_pred cCCCEEEEeCCCCcHHHHHHHH-----hCCCC-----EEEECHHH
Confidence 4566666677999999999888 46764 68899875
No 364
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=67.58 E-value=75 Score=29.08 Aligned_cols=142 Identities=10% Similarity=0.052 Sum_probs=77.7
Q ss_pred CceEEEEecCCCCC--CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-
Q psy10250 201 DVKVASVAAGFPSG--QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG- 277 (387)
Q Consensus 201 ~v~v~tVvigFP~G--~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~- 277 (387)
..+++.....|+.. ..+.+. ++.+.+.|.+-|++...-.. .+. ..++.++++.+.. .-+++..=++
T Consensus 20 ~mklg~~~~~~~~~~~~~~l~~----l~~~~~~G~~~vEl~~~~~~----~~~--~~~~~~l~~~l~~-~gl~i~~~~~~ 88 (309)
T 2hk0_A 20 HMKHGIYYSYWEHEWSAKFGPY----IEKVAKLGFDIIEVAAHHIN----EYS--DAELATIRKSAKD-NGIILTAGIGP 88 (309)
T ss_dssp -CEEEEEGGGGCSCTTSCSHHH----HHHHHHTTCSEEEEEHHHHT----TSC--HHHHHHHHHHHHH-TTCEEEEECCC
T ss_pred CceeEEehhhcccccccccHHH----HHHHHHhCCCEEEeccCCcc----ccc--hhhHHHHHHHHHH-cCCeEEEecCC
Confidence 35665543345431 233332 66677889999999864211 111 1455555555543 2355555222
Q ss_pred ----cCCC-h--------HHHHHHHHHHHHcCCCEEEcCC----CCCCCC--CChhhhHhHHHHHHHHHH---HcCCCce
Q psy10250 278 ----ELKT-S--------ENIYCASMTAMFAGSDFIKTST----GKEKTN--ATIPAGIIMCSAIKHFHK---LSGKKIG 335 (387)
Q Consensus 278 ----~L~t-~--------e~i~~a~~ia~~aGaDfVKTST----Gf~~~g--at~~~~~~m~~~v~~~~~---~~~~~~g 335 (387)
.|.+ + +.+.++.++|.+.|+.+|...+ |..+.+ .+.+....+.+.++.+.+ ..|-++.
T Consensus 89 ~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~ 168 (309)
T 2hk0_A 89 SKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLC 168 (309)
T ss_dssp CSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 2322 1 4466788999999999998655 432112 222333334444444433 3344566
Q ss_pred EeEec-----cCCCHHHHHHHHH
Q psy10250 336 LKPAG-----GISTFEDSVRWIY 353 (387)
Q Consensus 336 IKasG-----GIrt~~~a~~~i~ 353 (387)
+-.-+ -+.|.+++..+++
T Consensus 169 lEn~~~~~~~~~~~~~~~~~l~~ 191 (309)
T 2hk0_A 169 IEVLNRFENHVLNTAAEGVAFVK 191 (309)
T ss_dssp EECCCTTTCSSCCSHHHHHHHHH
T ss_pred EeecccccccccCCHHHHHHHHH
Confidence 65542 3688999999986
No 365
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=67.20 E-value=11 Score=36.22 Aligned_cols=20 Identities=40% Similarity=0.592 Sum_probs=18.0
Q ss_pred EeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 338 PAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 338 asGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
+.|||.|+++|..++ ++|++
T Consensus 205 AnGGI~TpedA~~~l-----e~GaD 224 (291)
T 3o07_A 205 AAGGVATPADAALLM-----QLGCD 224 (291)
T ss_dssp BCSSCCSHHHHHHHH-----HTTCS
T ss_pred cCCCCCCHHHHHHHH-----HhCCC
Confidence 479999999999999 58986
No 366
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=67.16 E-value=85 Score=29.58 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=71.2
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.
T Consensus 14 Gv~~a~v-TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~ 90 (303)
T 2wkj_A 14 GVMAALL-TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCV 90 (303)
T ss_dssp SEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCS
T ss_pred ceEEeeE-cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCC
Confidence 3444444 455 4577777777888999999999996555445554444555555666667776654 57899999998
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf 306 (387)
++ ++..+.++.|.++|+|.+=-.+=|
T Consensus 91 ~t-~~ai~la~~A~~~Gadavlv~~P~ 116 (303)
T 2wkj_A 91 ST-AESQQLAASAKRYGFDAVSAVTPF 116 (303)
T ss_dssp SH-HHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CH-HHHHHHHHHHHhCCCCEEEecCCC
Confidence 66 456678889999999987655543
No 367
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=67.12 E-value=82 Score=29.89 Aligned_cols=144 Identities=11% Similarity=0.080 Sum_probs=91.6
Q ss_pred CceEEEEecCC--CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 201 DVKVASVAAGF--PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 201 ~v~v~tVvigF--P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-
T Consensus 14 Gv~~a~v-TPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~ 90 (314)
T 3d0c_A 14 TISGINI-VPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGY 90 (314)
T ss_dssp SEEECCC-CCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECS
T ss_pred ceEEeee-ccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCc
Confidence 4444444 566 6688888888889999999999885333334444443455555566667777654 5789999999
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH----------------------HHHHHHHHHcCCCceE
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC----------------------SAIKHFHKLSGKKIGL 336 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~----------------------~~v~~~~~~~~~~~gI 336 (387)
++.+ -.+.++.|.++|+|.+=-.+=|.. ..|.+.+..-+ +.+..+.+ .++=+||
T Consensus 91 -st~~-ai~la~~A~~~Gadavlv~~P~y~-~~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~-~pnIvgi 166 (314)
T 3d0c_A 91 -SVDT-AIELGKSAIDSGADCVMIHQPVHP-YITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAP-LDKLVGI 166 (314)
T ss_dssp -SHHH-HHHHHHHHHHTTCSEEEECCCCCS-CCCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTT-CTTEEEE
T ss_pred -CHHH-HHHHHHHHHHcCCCEEEECCCCCC-CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHc-CCCEEEE
Confidence 7755 557788899999998876665422 12333222111 12222321 3556799
Q ss_pred eEeccCCCHHHHHHHHH
Q psy10250 337 KPAGGISTFEDSVRWIY 353 (387)
Q Consensus 337 KasGGIrt~~~a~~~i~ 353 (387)
|-|.| +..+..+++.
T Consensus 167 Kdssg--d~~~~~~~~~ 181 (314)
T 3d0c_A 167 KYAIN--DIQRVTQVMR 181 (314)
T ss_dssp EECCC--CHHHHHHHHH
T ss_pred EeCCC--CHHHHHHHHH
Confidence 98877 5666666664
No 368
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=66.82 E-value=24 Score=36.79 Aligned_cols=135 Identities=12% Similarity=0.128 Sum_probs=79.1
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc-
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA- 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a- 295 (387)
..+.-+..+++.++.|||=||+-+.... -...+|+++++........+-+.|.|. ..+ + .+.|.++
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~~~------v~~~ee~~rvv~~i~~~~~vpisIDT~---~~~-v---~eaal~~~ 404 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGIES------QIDVRYVEKIVQTLPYVSNVPLSLDIQ---NVD-L---TERALRAY 404 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSSGG------GSCHHHHHHHHHHHHHHTCSCEEEECC---CHH-H---HHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCC------CCHHHHHHHHHHHHHhhCCceEEEeCC---CHH-H---HHHHHHhc
Confidence 3566777899999999999999853322 223455555555443211345677775 233 3 3445555
Q ss_pred -CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEecc-C-CCHHH----HHHHHHHHHHhcCCC---ccC
Q psy10250 296 -GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGG-I-STFED----SVRWIYLVLIMLGPD---WLN 365 (387)
Q Consensus 296 -GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGG-I-rt~~~----a~~~i~l~~~~~Ga~---w~~ 365 (387)
|++.|..-+|.. +....|+..++. .+-.+-+....| + +|+++ +.+.+..+. .+|-. +++
T Consensus 405 ~G~~iINdis~~~------~~~~~~~~~~~~----~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~-~~Gi~~~IilD 473 (566)
T 1q7z_A 405 PGRSLFNSAKVDE------EELEMKINLLKK----YGGTLIVLLMGKDVPKSFEERKEYFEKALKILE-RHDFSDRVIFD 473 (566)
T ss_dssp SSCCEEEEEESCH------HHHHHHHHHHHH----HCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHH-HTTCGGGEEEE
T ss_pred CCCCEEEECCcch------hhHHHHHHHHHH----hCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHH-HCCCCCcEEEe
Confidence 999998877752 211234333333 355666666655 3 44443 444444444 67874 558
Q ss_pred CCcceeeccc
Q psy10250 366 KDLFRIGASS 375 (387)
Q Consensus 366 ~~~~RIGtSs 375 (387)
|+.+=||+.-
T Consensus 474 Pg~~~igfgk 483 (566)
T 1q7z_A 474 PGVLPLGAEG 483 (566)
T ss_dssp CCCCCTTTTC
T ss_pred CCCCcccCcH
Confidence 8887777654
No 369
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=66.73 E-value=47 Score=31.17 Aligned_cols=137 Identities=17% Similarity=0.102 Sum_probs=87.6
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.| -..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .++||.=++-.++ ++..+
T Consensus 12 TPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t-~~ai~ 87 (291)
T 3a5f_A 12 TPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNT-AASIA 87 (291)
T ss_dssp CCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred cCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccH-HHHHH
Confidence 455 457 777777788999999999986544445554444555555666667777664 4789999999866 45667
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhH--------------------------hHHHHHHHHHHHcCCCceEeEecc
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGI--------------------------IMCSAIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~--------------------------~m~~~v~~~~~~~~~~~gIKasGG 341 (387)
.++.|.++|+|.+=-.+=|... .|.+... +-.+.++.+.+ .++=+|||-|.|
T Consensus 88 la~~a~~~Gadavlv~~P~y~~-~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivgiK~s~g 165 (291)
T 3a5f_A 88 MSKWAESIGVDGLLVITPYYNK-TTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE-DKNIVAVXEASG 165 (291)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC-CCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT-STTEEEEEECSC
T ss_pred HHHHHHhcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-CCCEEEEeCCCC
Confidence 8889999999987554433211 1111100 01133444433 466789999876
Q ss_pred CCCHHHHHHHHH
Q psy10250 342 ISTFEDSVRWIY 353 (387)
Q Consensus 342 Irt~~~a~~~i~ 353 (387)
+..+..+++.
T Consensus 166 --d~~~~~~~~~ 175 (291)
T 3a5f_A 166 --NISQIAQIKA 175 (291)
T ss_dssp --CHHHHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 5666666664
No 370
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=66.64 E-value=20 Score=35.60 Aligned_cols=80 Identities=11% Similarity=0.171 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCCEEEcCCC--C--------------CCCCCChh-hhHhHHHHHHHHHHHcC-CCceEeEeccC----
Q psy10250 285 IYCASMTAMFAGSDFIKTSTG--K--------------EKTNATIP-AGIIMCSAIKHFHKLSG-KKIGLKPAGGI---- 342 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTG--f--------------~~~gat~~-~~~~m~~~v~~~~~~~~-~~~gIKasGGI---- 342 (387)
..+|++.|.++|.|.|.---| | ...|-+++ ..+.+++-|+.+++.++ ..++||.|.+-
T Consensus 173 f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g 252 (402)
T 2hsa_B 173 YRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLD 252 (402)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTT
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCC
Confidence 446788899999999985322 1 01233443 45556677777888887 48999998652
Q ss_pred -C---CHHHHHHHHHHHHHhcC------CCccC
Q psy10250 343 -S---TFEDSVRWIYLVLIMLG------PDWLN 365 (387)
Q Consensus 343 -r---t~~~a~~~i~l~~~~~G------a~w~~ 365 (387)
. +.+++..+....+ .+| .+|++
T Consensus 253 ~~~~~~~~~~~~la~~le-~~G~~gg~~vd~i~ 284 (402)
T 2hsa_B 253 AMDSNPLSLGLAVVERLN-KIQLHSGSKLAYLH 284 (402)
T ss_dssp CCCSCHHHHHHHHHHHHH-HHHHHHTSCCSEEE
T ss_pred CCCCCCHHHHHHHHHHHH-hcCCccCCceEEEE
Confidence 2 3566776665443 457 77763
No 371
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=66.64 E-value=62 Score=31.02 Aligned_cols=136 Identities=10% Similarity=-0.035 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~a 295 (387)
+.+.-..+++.+++.|.+-+.+=+. .+...+=+++|++++++. +.+.+... -+ +.++ .+.++...+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~--------~~~~~e~v~avr~~~g~~--~~l~vDan~~~-~~~~-~~~~~~l~~~ 208 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIE--------PGWDVEPVRAVRERFGDD--VLLQVDANTAY-TLGD-APQLARLDPF 208 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECB--------TTBSHHHHHHHHHHHCTT--SEEEEECTTCC-CGGG-HHHHHTTGGG
T ss_pred CHHHHHHHHHHHHHhCccEEEEecC--------chhHHHHHHHHHHhcCCC--ceEEEeccCCC-CHHH-HHHHHHHHhc
Confidence 6677778899999999998886431 133346678888888753 44566653 34 5566 6777778889
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--..- +++. +..+.+++. -++.|=+-+.+.+.+++..++. .-.++.++.+..|+|. +
T Consensus 209 ~i~~iE~P~~-------~~~~----~~~~~l~~~--~~ipIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGit 271 (368)
T 1sjd_A 209 GLLLIEQPLE-------EEDV----LGHAELARR--IQTPICLDESIVSARAAADAIK----LGAVQIVNIKPGRVGGYL 271 (368)
T ss_dssp CCSEEECCSC-------TTCH----HHHHHHHTT--CSSCEEESTTCCSHHHHHHHHH----TTCCSEEEECTTTTTSHH
T ss_pred CCCeEeCCCC-------hhhH----HHHHHHHHh--CCCCEEECCCcCCHHHHHHHHH----cCCCCEEEecccccCCHH
Confidence 9999985431 1111 233444433 2456666667889999999994 3346777888888855 5
Q ss_pred chHHHHH
Q psy10250 375 SLLNNIL 381 (387)
Q Consensus 375 s~~~il~ 381 (387)
.++++..
T Consensus 272 ~~~~i~~ 278 (368)
T 1sjd_A 272 EARRVHD 278 (368)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 372
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=66.60 E-value=60 Score=31.86 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=71.8
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.
T Consensus 62 Gi~~alv-TPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~ 138 (360)
T 4dpp_A 62 RVITAIK-TPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNTGSN 138 (360)
T ss_dssp CEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCS
T ss_pred CeEEEEe-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCC
Confidence 4544444 566 5677788888888999999999996444444444433445555556666676654 57899999988
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf 306 (387)
++ ++-.+.++.|.++|||.+=--+=|
T Consensus 139 st-~eai~la~~A~~~Gadavlvv~Py 164 (360)
T 4dpp_A 139 ST-REAIHATEQGFAVGMHAALHINPY 164 (360)
T ss_dssp SH-HHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CH-HHHHHHHHHHHHcCCCEEEEcCCC
Confidence 66 456678899999999987665544
No 373
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=66.16 E-value=27 Score=33.29 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=63.8
Q ss_pred HHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCC
Q psy10250 226 ELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTG 305 (387)
Q Consensus 226 ~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTG 305 (387)
..+.+.|+ ++++.. +. -+.+.+.++++.+++.+..+..+-+++. ++ ......+.+.++|+|+|-++.|
T Consensus 30 ~av~~aG~--lG~i~~-~~---~~~~~~~~~i~~i~~~~~~p~gvnl~~~-----~~-~~~~~~~~a~~~g~d~V~~~~g 97 (332)
T 2z6i_A 30 GAVSKAGG--LGIIGG-GN---APKEVVKANIDKIKSLTDKPFGVNIMLL-----SP-FVEDIVDLVIEEGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHTS--BEEEEC-TT---CCHHHHHHHHHHHHHHCCSCEEEEECTT-----ST-THHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHhCCC--cEEeCC-CC---CCHHHHHHHHHHHHHhcCCCEEEEecCC-----CC-CHHHHHHHHHHCCCCEEEECCC
Confidence 33555576 555532 11 2567788889999887643233333331 21 2445678899999999987765
Q ss_pred CCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCC
Q psy10250 306 KEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 366 (387)
Q Consensus 306 f~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~ 366 (387)
- + .+ -++.+++ .+ +++...+.+.+++..+. ..|+|++.-
T Consensus 98 ~-p----~~-------~i~~l~~-~g----~~v~~~v~~~~~a~~~~-----~~GaD~i~v 136 (332)
T 2z6i_A 98 N-P----SK-------YMERFHE-AG----IIVIPVVPSVALAKRME-----KIGADAVIA 136 (332)
T ss_dssp C-G----GG-------THHHHHH-TT----CEEEEEESSHHHHHHHH-----HTTCSCEEE
T ss_pred C-h----HH-------HHHHHHH-cC----CeEEEEeCCHHHHHHHH-----HcCCCEEEE
Confidence 2 1 21 2233333 23 44444468899988877 589987733
No 374
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=65.36 E-value=54 Score=30.15 Aligned_cols=196 Identities=11% Similarity=0.064 Sum_probs=101.4
Q ss_pred HHHHHHHHHcCCCeeeee-cchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy10250 13 LHEIELLAKQKVDEVDIV-IQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFI 91 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~V-in~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfv 91 (387)
..|+...++.=.+.++++ +++..+.+.- .+=++.+++ + -.++|+..-+-+-......+++.+.+.|+|++
T Consensus 20 ~~~al~l~~~~~~~v~~~Kvg~~lf~~~G----~~~v~~L~~--~---g~~iflDlK~~DI~nTv~~~~~~~~~~gad~v 90 (239)
T 3tr2_A 20 VEQARAQINPLTPELCHLKIGSILFTRYG----PAFVEELMQ--K---GYRIFLDLKFYDIPQTVAGACRAVAELGVWMM 90 (239)
T ss_dssp HHHHHHHHTTCCTTTCEEEEEHHHHHHHH----HHHHHHHHH--T---TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCcccEEEeCHHHHHhhC----HHHHHHHHh--c---CCCEEEEecccccchHHHHHHHHHHhCCCCEE
Confidence 445666666555677776 7777664311 112233332 1 24778777654445566678888899999996
Q ss_pred ecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHh-----hcccccccCCC------------CCCHHHHHHHHHH
Q psy10250 92 KTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKI-----IEFIDLTTLSG------------DDTEAVVETLTLK 154 (387)
Q Consensus 92 KTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~ID~T~L~~------------~~T~~~i~~l~~~ 154 (387)
-- .+|++. .++.. ....+++. ..++=.|.|.. ..-.+.+.++.+.
T Consensus 91 Tv-h~~~G~-~~~~~----------------a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~ 152 (239)
T 3tr2_A 91 NI-HISGGR-TMMET----------------VVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATL 152 (239)
T ss_dssp EE-EGGGCH-HHHHH----------------HHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHH
T ss_pred EE-eccCCH-HHHHH----------------HHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 43 223211 01110 00000000 00111122221 1223555566666
Q ss_pred hcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHH-HHHHHHHHHHCCC
Q psy10250 155 AIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLET-RLHEIELLAKQKV 233 (387)
Q Consensus 155 A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~-K~~Ea~~Ai~~GA 233 (387)
|. +.|..++.++|..+...|+.+. .+..+.|--|+ |.|...-+- ++.-..++++.||
T Consensus 153 a~----------------~~g~~GvV~s~~e~~~ir~~~~-----~~fl~vtPGIr-~~g~~~~dQ~rv~t~~~~~~aGa 210 (239)
T 3tr2_A 153 AK----------------SAGLDGVVCSAQEAALLRKQFD-----RNFLLVTPGIR-LETDEKGDQKRVMTPRAAIQAGS 210 (239)
T ss_dssp HH----------------HHTCCEEECCHHHHHHHHTTCC-----TTSEEEECCBC-----------CCBCHHHHHHHTC
T ss_pred HH----------------HcCCCEEEECchhHHHHHHhcC-----CCcEEECCCcC-CCCCCcCcccccCCHHHHHHcCC
Confidence 65 5678888889988877766543 34544333246 555432221 1223667888999
Q ss_pred CeeeeecCchhhhcCChhHHHHHHHH
Q psy10250 234 DEVDIVIQRSLVLNNQWPELFSEVKQ 259 (387)
Q Consensus 234 dEID~Vin~~~lk~g~~~~v~~Ei~~ 259 (387)
|- +|+=.+-+++.|.....++|+.
T Consensus 211 d~--lVvGr~I~~a~dp~~a~~~i~~ 234 (239)
T 3tr2_A 211 DY--LVIGRPITQSTDPLKALEAIDK 234 (239)
T ss_dssp SE--EEECHHHHTSSSHHHHHHHHHH
T ss_pred CE--EEEChHHhCCCCHHHHHHHHHH
Confidence 95 6777877887777665555543
No 375
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=65.13 E-value=26 Score=33.98 Aligned_cols=77 Identities=17% Similarity=0.191 Sum_probs=51.9
Q ss_pred HHHHHHHHcCCCEEEcCC--CC--------------CCCCCChh-hhHhHHHHHHHHHHHcCC--CceEeEecc-----C
Q psy10250 287 CASMTAMFAGSDFIKTST--GK--------------EKTNATIP-AGIIMCSAIKHFHKLSGK--KIGLKPAGG-----I 342 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTST--Gf--------------~~~gat~~-~~~~m~~~v~~~~~~~~~--~~gIKasGG-----I 342 (387)
+|++.|.++|.|.|.--- || ...|-+++ ..+..++-|+.+++.+|. .++||.|.. =
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Confidence 477889999999887541 22 11233454 445566778888888874 699999962 2
Q ss_pred CCHHHHHHHHHHHHHhcCCCccC
Q psy10250 343 STFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 343 rt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
-+.+++..+....++. .+|++
T Consensus 227 ~~~~~~~~~a~~l~~~--vd~i~ 247 (343)
T 3kru_A 227 INIDMMVEYINMIKDK--VDLID 247 (343)
T ss_dssp CCHHHHHHHHHHHTTT--CSEEE
T ss_pred ccHHHHHHHHHHhhcc--ccEEe
Confidence 4678888887765554 77764
No 376
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=64.95 E-value=47 Score=30.15 Aligned_cols=119 Identities=18% Similarity=0.250 Sum_probs=68.2
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEE-EEee--------ccCCC-h--------HHHH
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKT-ILAV--------GELKT-S--------ENIY 286 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKv-IlEt--------~~L~t-~--------e~i~ 286 (387)
++.+.+.|.+-|++...-.. +.-.+++++..+..+ +++ -+-+ ..+.+ + +.+.
T Consensus 47 l~~~~~~G~~~vEl~~~~~~------~~~~~~~~~~l~~~g----l~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~ 116 (290)
T 2zvr_A 47 MELAKRVGYQAVEIAVRDPS------IVDWNEVKILSEELN----LPICAIGTGQAYLADGLSLTHPNDEIRKKAIERVV 116 (290)
T ss_dssp HHHHHHHTCSEEEEECSCGG------GSCHHHHHHHHHHHT----CCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEcCCCcc------hhhHHHHHHHHHHcC----CeEEEEeccCccccCCCCCCCCCHHHHHHHHHHHH
Confidence 55666789999999865321 111234444443332 444 2333 12322 2 3466
Q ss_pred HHHHHHHHcCCCEEEcC-CCCCCCCCChhhhHhHHHHHHHHHHHcCC-CceEeEe-----ccCCCHHHHHHHHH
Q psy10250 287 CASMTAMFAGSDFIKTS-TGKEKTNATIPAGIIMCSAIKHFHKLSGK-KIGLKPA-----GGISTFEDSVRWIY 353 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTS-TGf~~~gat~~~~~~m~~~v~~~~~~~~~-~~gIKas-----GGIrt~~~a~~~i~ 353 (387)
++.++|.+.|+++|..+ .|+.+...+.+....+.+.++.+.+.... ++.+-.- .-+.|.+++..+++
T Consensus 117 ~~i~~A~~lG~~~v~~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~~~~~~~~~~l~~ 190 (290)
T 2zvr_A 117 KHTEVAGMFGALVIIGLVRGRREGRSYEETEELFIESMKRLLELTEHAKFVIEPLNRYETDFINTIDDALRILR 190 (290)
T ss_dssp HHHHHHHHHTCEEEESGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCCcCccccCCHHHHHHHHH
Confidence 78889999999999854 46522223334445566677776666553 3334332 23578999999986
No 377
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=64.87 E-value=73 Score=28.01 Aligned_cols=124 Identities=13% Similarity=0.130 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEE-Eeecc---------CC-C--
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE---------LK-T-- 281 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvI-lEt~~---------L~-t-- 281 (387)
..+.+..+ +.+.+.|.+-|++..+. +++ .+++++..+.. -+++. +-+.+ +. +
T Consensus 14 ~~~~~~~l---~~~~~~G~~~vEl~~~~------~~~--~~~~~~~l~~~----gl~~~~~~~~~~~~~~g~~~~~~~~~ 78 (260)
T 1k77_A 14 EVPFIERF---AAARKAGFDAVEFLFPY------NYS--TLQIQKQLEQN----HLTLALFNTAPGDINAGEWGLSALPG 78 (260)
T ss_dssp TSCGGGHH---HHHHHHTCSEEECSCCT------TSC--HHHHHHHHHHT----TCEEEEEECCCCCGGGTCSCSTTCTT
T ss_pred CCCHHHHH---HHHHHhCCCEEEecCCC------CCC--HHHHHHHHHHc----CCceEEEecCCcccccccCCCCCChh
Confidence 44555444 44556799999998642 121 34444444332 35555 44432 11 1
Q ss_pred -----hHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChh-hhHhHHHHHHHHHHHc---CCCceEeEe------c-cCCCH
Q psy10250 282 -----SENIYCASMTAMFAGSDFIKTSTGKEKTNATIP-AGIIMCSAIKHFHKLS---GKKIGLKPA------G-GISTF 345 (387)
Q Consensus 282 -----~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~-~~~~m~~~v~~~~~~~---~~~~gIKas------G-GIrt~ 345 (387)
.+.+.++.++|.+.|+.+|.+.+|+.+.+.+.+ ....+.+.++.+.+.. |-++.+-.- | -+.|.
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~ 158 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQ 158 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCH
Confidence 135677889999999999999899765444332 3334445555544443 334444443 2 36889
Q ss_pred HHHHHHHH
Q psy10250 346 EDSVRWIY 353 (387)
Q Consensus 346 ~~a~~~i~ 353 (387)
+++..+++
T Consensus 159 ~~~~~l~~ 166 (260)
T 1k77_A 159 YQALAIVE 166 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 378
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=64.77 E-value=34 Score=30.65 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=68.8
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEee--ccCC---Ch-HHHHHHHHHHHHcCC
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV--GELK---TS-ENIYCASMTAMFAGS 297 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt--~~L~---t~-e~i~~a~~ia~~aGa 297 (387)
-++.+.+.|.+-|++..+. +.. .+ -.+++++..+..+ |++..-. ..+. +. +.+.++.+.|.+.|+
T Consensus 28 ~l~~a~~~G~~~vEl~~~~--~~~--~~-~~~~~~~~l~~~g----l~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa 98 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELREEL--FAG--PP-DTEALTAAIQLQG----LECVFSSPLELWREDGQLNPELEPTLRRAEACGA 98 (264)
T ss_dssp GHHHHHHHTCSEEEEEGGG--CSS--CC-CHHHHHHHHHHTT----CEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEEHHh--cCC--CH-HHHHHHHHHHHcC----CEEEEecchhhcCCchhHHHHHHHHHHHHHHcCC
Confidence 3567778899999997552 221 12 2334444433322 3433211 1111 12 568899999999999
Q ss_pred CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEecc--CCCHHHHHHHHHHH
Q psy10250 298 DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGG--ISTFEDSVRWIYLV 355 (387)
Q Consensus 298 DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGG--Irt~~~a~~~i~l~ 355 (387)
.+|.+.+|.......+ +.+..+.+..|-++.+-.-++ ..|++++..+++.+
T Consensus 99 ~~v~~~~g~~~~~~~l-------~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v 151 (264)
T 1yx1_A 99 GWLKVSLGLLPEQPDL-------AALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLA 151 (264)
T ss_dssp SEEEEEEECCCSSCCH-------HHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHH
T ss_pred CEEEEecCCCCcHHHH-------HHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 9999998864432222 334344334455666666655 46788888888755
No 379
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=64.69 E-value=11 Score=37.11 Aligned_cols=78 Identities=12% Similarity=0.080 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCCEEEcCCC--C------CC--------CCCChh-hhHhHHHHHHHHHHHcCC-CceEeEecc-----CC
Q psy10250 287 CASMTAMFAGSDFIKTSTG--K------EK--------TNATIP-AGIIMCSAIKHFHKLSGK-KIGLKPAGG-----IS 343 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTSTG--f------~~--------~gat~~-~~~~m~~~v~~~~~~~~~-~~gIKasGG-----Ir 343 (387)
+|++.|.++|.|.|.---| | ++ .|-+++ ..+..++-|+.+++.++. .++||.|+. ..
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 4788899999999986433 2 11 133454 455566777777888875 899999974 21
Q ss_pred ---CHHHHHHHHHHHHHhcCCCccC
Q psy10250 344 ---TFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 344 ---t~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
+.+++..+....+ .+|.+|++
T Consensus 237 ~~~~~~~~~~la~~l~-~~Gvd~i~ 260 (362)
T 4ab4_A 237 DADRAETFTYVARELG-KRGIAFIC 260 (362)
T ss_dssp CTTHHHHHHHHHHHHH-HTTCSEEE
T ss_pred CCCcHHHHHHHHHHHH-HhCCCEEE
Confidence 2456666665443 57998874
No 380
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=64.66 E-value=21 Score=31.92 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCCEEEcCC--C-CCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 287 CASMTAMFAGSDFIKTST--G-KEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTST--G-f~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
..++.+.++|+|+|--.+ | |.+ +.+. +.++.+++.+ .+.+=+-|||++++++..++ .+|++
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~-~~~~-------~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l-----~~Gad 98 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGR-GSNH-------ELLAEVVGKL--DVQVELSGGIRDDESLAAAL-----ATGCA 98 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTS-CCCH-------HHHHHHHHHC--SSEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHHcCCCEEEEEcCcccccC-CChH-------HHHHHHHHhc--CCcEEEECCCCCHHHHHHHH-----HcCCC
Confidence 445678889999998754 3 322 2222 2455556554 46677789999999999999 58984
No 381
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=64.56 E-value=92 Score=29.02 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=79.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 293 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~ 293 (387)
|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ ||.=++-.++ ++-.+.++.|.
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----vi~Gvg~~~t-~~ai~la~~A~ 87 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-----VIVQVASLNA-DEAIALAKYAE 87 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-----EEEECCCSSH-HHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----EEEeeCCCCH-HHHHHHHHHHH
Confidence 55566666778889999999885444334433333344444445555555542 9999998866 44557788899
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHH-----------------------HHHHcCCCceEeEeccCCCHHHHHH
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKH-----------------------FHKLSGKKIGLKPAGGISTFEDSVR 350 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~-----------------------~~~~~~~~~gIKasGGIrt~~~a~~ 350 (387)
++|+|.+=-.+=|.....|.+....-+++|.. +.+ .++=+|||-|.| +..+..+
T Consensus 88 ~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~-~pnivgiKds~g--d~~~~~~ 164 (286)
T 2r91_A 88 SRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE-LGCIRGVKDTNE--SLAHTLA 164 (286)
T ss_dssp HTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH-HSCEEEEEECCS--CHHHHHH
T ss_pred hcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh-cCCEEEEEeCCC--CHHHHHH
Confidence 99999887666543221344433322222222 224 577789999876 5566555
Q ss_pred HH
Q psy10250 351 WI 352 (387)
Q Consensus 351 ~i 352 (387)
++
T Consensus 165 ~~ 166 (286)
T 2r91_A 165 YK 166 (286)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 382
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=64.43 E-value=21 Score=34.12 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=60.4
Q ss_pred HHHHHHHHCCCCeeeee----cCchhhhcC-ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCC
Q psy10250 223 HEIELLAKQKVDEVDIV----IQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~V----in~~~lk~g-~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGa 297 (387)
..|+.+-+.||++|-+. -++.++. | ....-.+.|+++++.+. .|+=+..=...+ + -.+++.++||
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~-g~~R~~~~~~i~~i~~~v~--iPvl~k~~i~~i---d----e~qil~aaGA 101 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTD-GVARSVDPLKIEEIRKCIS--INVLAKVRIGHF---V----EAQILEELKV 101 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CC-CCCCCCCHHHHHHHHTTCC--SEEEEEEETTCH---H----HHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcC-CcccCCCHHHHHHHHHhcC--CCEEEeccCCcH---H----HHHHHHHcCC
Confidence 45777888999999766 2444443 3 22223455666777664 344333322322 2 2344558999
Q ss_pred CEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 298 DFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 298 DfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
|+|-+|.+ .++++ -++.+++. ..++.+-.+++|.+++...+ .+|++
T Consensus 102 D~Id~s~~-----~~~~~------li~~i~~~---~~g~~vvv~v~~~~Ea~~a~-----~~Gad 147 (297)
T 4adt_A 102 DMLDESEV-----LTMAD------EYNHINKH---KFKTPFVCGCTNLGEALRRI-----SEGAS 147 (297)
T ss_dssp SEEEEETT-----SCCSC------SSCCCCGG---GCSSCEEEEESSHHHHHHHH-----HHTCS
T ss_pred CEEEcCCC-----CCHHH------HHHHHHhc---CCCCeEEEEeCCHHHHHHHH-----hCCCC
Confidence 99943333 23321 11111111 13455556899999999998 47884
No 383
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=64.40 E-value=93 Score=29.03 Aligned_cols=197 Identities=16% Similarity=0.209 Sum_probs=105.6
Q ss_pred HHHHHHHHcCCCee-eee-cchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy10250 14 HEIELLAKQKVDEV-DIV-IQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFI 91 (387)
Q Consensus 14 ~E~~~a~~~GA~Ei-D~V-in~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfv 91 (387)
.|+...++.=.+.+ +++ +++..+.+.-.+ + ++.+++. + .+||+-.-+-+-+.....+++.+.+.|+|++
T Consensus 17 ~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~-~---v~~Lk~~--g---~~VflDlK~~DIpnTv~~a~~~~~~~gad~v 87 (259)
T 3tfx_A 17 EQLNKILSKLGDPHDVFVKVGMELFYNAGID-V---IKKLTQQ--G---YKIFLDLKMHDIPNTVYNGAKALAKLGITFT 87 (259)
T ss_dssp HHHHHHHHTTCCGGGCEEEECHHHHHHHCHH-H---HHHHHHT--T---CEEEEEEEECSCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHhCcccceEEEeCHHHHHhcCHH-H---HHHHHHC--C---CcEEEEecccccchHHHHHHHHHHhcCCCEE
Confidence 45555555445666 655 666666642222 2 2333321 2 5788877666555666778888889999997
Q ss_pred ecCCCCCCCCCCCcccccchhccccchhhhhhHHHHH----------HhhcccccccCC----------CCCCHHHHHHH
Q psy10250 92 KTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLL----------KIIEFIDLTTLS----------GDDTEAVVETL 151 (387)
Q Consensus 92 KTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~----------~l~~~ID~T~L~----------~~~T~~~i~~l 151 (387)
-- .+|++. .| +.+ ....++ +++....+|... ...-.+.+.++
T Consensus 88 TV-h~~~G~--------~~-~~a--------a~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~ 149 (259)
T 3tfx_A 88 TV-HALGGS--------QM-IKS--------AKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSL 149 (259)
T ss_dssp EE-EGGGCH--------HH-HHH--------HHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHH
T ss_pred EE-cCCCCH--------HH-HHH--------HHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHH
Confidence 53 333211 11 000 000111 112222223221 01123455566
Q ss_pred HHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC-HHHHHHHHHHHHH
Q psy10250 152 TLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL-LETRLHEIELLAK 230 (387)
Q Consensus 152 ~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~-~e~K~~Ea~~Ai~ 230 (387)
.+.+. +.|+.+|..+|.-++..|+.+. .+..+.|--|+ |.|... --.++.-..++++
T Consensus 150 A~~a~----------------~~G~dGvV~s~~e~~~ir~~~~-----~~f~~vtPGIr-~~g~~~gDQ~Rv~T~~~a~~ 207 (259)
T 3tfx_A 150 AKMAK----------------HSGADGVICSPLEVKKLHENIG-----DDFLYVTPGIR-PAGNAKDDQSRVATPKMAKE 207 (259)
T ss_dssp HHHHH----------------HTTCCEEECCGGGHHHHHHHHC-----SSSEEEECCCC-CC-----------CHHHHHH
T ss_pred HHHHH----------------HhCCCEEEECHHHHHHHHhhcC-----CccEEEcCCcC-CCCCCcCCccccCCHHHHHH
Confidence 66666 5688888889988999988775 24443333134 455432 2233455778899
Q ss_pred CCCCeeeeecCchhhhcCChhHHHHHHHHHH
Q psy10250 231 QKVDEVDIVIQRSLVLNNQWPELFSEVKQMK 261 (387)
Q Consensus 231 ~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~ 261 (387)
.|||- +|+=.+-+++.|.....+++++-.
T Consensus 208 aGad~--iVvGr~I~~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 208 WGSSA--IVVGRPITLASDPKAAYEAIKKEF 236 (259)
T ss_dssp TTCSE--EEECHHHHTSSSHHHHHHHHHHHH
T ss_pred cCCCE--EEEChHHhCCCCHHHHHHHHHHHH
Confidence 99996 777788788888776666665543
No 384
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=64.18 E-value=80 Score=28.21 Aligned_cols=123 Identities=9% Similarity=0.072 Sum_probs=67.3
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEEeec---cCCC-h--------HHHHHHHHH
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVG---ELKT-S--------ENIYCASMT 291 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~---~L~t-~--------e~i~~a~~i 291 (387)
++.+.+.|.+-|++......-. .+ .++.++++.+.. +..+-.+...+ .|.+ + +.+.++.++
T Consensus 23 l~~~~~~G~~~vEl~~~~~~~~---~~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (290)
T 2qul_A 23 AKRIAGLGFDLMEISLGEFHNL---SD---AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDD 96 (290)
T ss_dssp HHHHHHTTCSEEEEESTTGGGS---CH---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEecCCcccc---ch---hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4556678999999986532111 11 345555555432 12333332111 1322 2 456678899
Q ss_pred HHHcCCCEEEcCC----CC---CCCCCChhhhHhHHHHHHHHH---HHcCCCceEeEec-----cCCCHHHHHHHHH
Q psy10250 292 AMFAGSDFIKTST----GK---EKTNATIPAGIIMCSAIKHFH---KLSGKKIGLKPAG-----GISTFEDSVRWIY 353 (387)
Q Consensus 292 a~~aGaDfVKTST----Gf---~~~gat~~~~~~m~~~v~~~~---~~~~~~~gIKasG-----GIrt~~~a~~~i~ 353 (387)
|.+.|+.+|..+. |+ .+...+.+....+.+.++.+. +..|-++.+-.-+ -+.|.+++..+++
T Consensus 97 a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 173 (290)
T 2qul_A 97 CHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFAD 173 (290)
T ss_dssp HHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHH
Confidence 9999999998643 53 112223333333444444333 3335566666543 2678999999986
No 385
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=64.05 E-value=32 Score=31.76 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchHHHHHHHHh
Q psy10250 322 AIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNNILQELE 385 (387)
Q Consensus 322 ~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~~il~~~~~ 385 (387)
-|+.+++.+ ..+.+=+-|||||.+|+.+++ . |++ ..-+| |...+..++.|+
T Consensus 180 ~i~~i~~~~-~~~Pv~vGgGI~s~e~a~~~~-----~-gAd-----~VIVG-Sa~v~~~~~~~~ 230 (234)
T 2f6u_A 180 LVAEVKKVL-DKARLFYGGGIDSREKAREML-----R-YAD-----TIIVG-NVIYEKGIDAFL 230 (234)
T ss_dssp HHHHHHHHC-SSSEEEEESCCCSHHHHHHHH-----H-HSS-----EEEEC-HHHHHHCHHHHH
T ss_pred HHHHHHHhC-CCCCEEEEecCCCHHHHHHHH-----h-CCC-----EEEEC-hHHHhCHHHHHH
Confidence 455566554 256788899999999999988 5 874 12233 456666666663
No 386
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=63.39 E-value=39 Score=33.19 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=48.3
Q ss_pred HHHHHHHHHCCCCeeeeecCc-----hhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC
Q psy10250 222 LHEIELLAKQKVDEVDIVIQR-----SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 296 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~-----~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG 296 (387)
..+++.+.+.|||-|.+-+-- .....+--..-..-+..++++++. ..+.||-.=+.- +.+++.+ ++.+|
T Consensus 160 ~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~-~~iPVIA~GGI~-~~~di~k----ala~G 233 (366)
T 4fo4_A 160 AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE-YGIPVIADGGIR-FSGDISK----AIAAG 233 (366)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGG-GTCCEEEESCCC-SHHHHHH----HHHTT
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhh-cCCeEEEeCCCC-CHHHHHH----HHHcC
Confidence 357888999999999872211 112221111122345555555543 235566655544 6677754 46679
Q ss_pred CCEEEcCCCCCC
Q psy10250 297 SDFIKTSTGKEK 308 (387)
Q Consensus 297 aDfVKTSTGf~~ 308 (387)
||+|--.|-|..
T Consensus 234 Ad~V~vGs~f~~ 245 (366)
T 4fo4_A 234 ASCVMVGSMFAG 245 (366)
T ss_dssp CSEEEESTTTTT
T ss_pred CCEEEEChHhhc
Confidence 999999998853
No 387
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=62.99 E-value=69 Score=32.73 Aligned_cols=178 Identities=12% Similarity=0.007 Sum_probs=101.9
Q ss_pred CCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHH
Q psy10250 142 DDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETR 221 (387)
Q Consensus 142 ~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K 221 (387)
..|.+|+.++-+ .-..+++.|.....+.+.|+. ..+++... ..||.|-..|+.=
T Consensus 271 g~~~~ei~~~~~---------------------A~~niv~~~~~~~~~A~~Le~---r~GiP~i~--~~~PiG~~~T~~~ 324 (519)
T 1qgu_B 271 GTTQQEMKEAPD---------------------AIDTLLLQPWQLLKSKKVVQE---MWNQPATE--VAIPLGLAATDEL 324 (519)
T ss_dssp CBCHHHHHHGGG---------------------EEEEEESSTTTCHHHHHHHHH---TSCCCCCC--CCCCBSHHHHHHH
T ss_pred CCCHHHHHhhhc---------------------CCEEEEECHHHHHHHHHHHHH---HcCCCeEe--cCCCcchHHHHHH
Confidence 478888876532 224688889776777778875 35676533 3799999988888
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
+.++.+....-+. .........+.+.+.......++ -||.|-. +.....-.++...+.|..=+-
T Consensus 325 L~~la~~~g~~~~---------~~i~~er~~~~~~l~d~~~~l~G---krv~i~g----d~~~~~~la~~L~ElGm~vv~ 388 (519)
T 1qgu_B 325 LMTVSQLSGKPIA---------DALTLERGRLVDMMLDSHTWLHG---KKFGLYG----DPDFVMGLTRFLLELGCEPTV 388 (519)
T ss_dssp HHHHHHHHCCCCC---------HHHHHHHHHHHHHHHHHHHHHTT---CEEEEES----CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCcH---------HHHHHHHHHHHHHHHHHHHHcCC---CEEEEEC----CchHHHHHHHHHHHCCCEEEE
Confidence 8887776643111 11111222333333333333343 3666643 344455567777799999888
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchHHHH
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNNI 380 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~~il 380 (387)
..|++. +.+. -+.++.+.+..+...+.++.-+ .++.+..+++. ..++| .-||.|....+-
T Consensus 389 v~~~~~----~~~~----~~~~~~ll~~~~~~~~~~v~~~-~d~~~l~~~i~----~~~pD------Liig~~~~~~~a 448 (519)
T 1qgu_B 389 ILSHNA----NKRW----QKAMNKMLDASPYGRDSEVFIN-CDLWHFRSLMF----TRQPD------FMIGNSYGKFIQ 448 (519)
T ss_dssp EEETTC----CHHH----HHHHHHHHHHSTTCTTCEEEES-CCHHHHHHHHH----HHCCS------EEEECGGGHHHH
T ss_pred EEeCCC----CHHH----HHHHHHHHHhcCCCCCCEEEEC-CCHHHHHHHHh----hcCCC------EEEECcchHHHH
Confidence 888763 2222 1344444444432222344333 46666666664 45665 678888764443
No 388
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=62.98 E-value=38 Score=33.66 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc--CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcC
Q psy10250 254 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA--GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSG 331 (387)
Q Consensus 254 ~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a--GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~ 331 (387)
.+=+++.++..++ ..|+++|+.-++ +++..|.+.+ ++ |+|-|-==+- ++.. .+.......++.+.+..+
T Consensus 197 ~~A~~~~~~~~p~--~~~~~vlvDT~d--~~~~~al~~a-~~l~~~d~IrlDs~-~~~~---gd~~~~v~~v~~~ld~~G 267 (398)
T 2i1o_A 197 EEAWKLTLENTKN--GQKSVLLIDTYM--DEKFAAIKIA-EMFDKVDYIRLDTP-SSRR---GNFEALIREVRWELALRG 267 (398)
T ss_dssp HHHHHHHHHTCCT--TSCCEEECCSSS--CHHHHHHHHH-TTCSCCCEEEECCC-GGGC---SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC--CCCEEEEEcCch--HHHHHHHHHH-HhhcCCcEEEeCCC-CCCc---ccHHHHHHHHHHHHHhCC
Confidence 4445555555543 368999999883 2566665544 33 6666654331 1100 111222223333323333
Q ss_pred -CCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeeccchH
Q psy10250 332 -KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLL 377 (387)
Q Consensus 332 -~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~ 377 (387)
+++.|=+|||| |.+.+.+|. ..|+ +.||.++.+
T Consensus 268 ~~~~~I~aSggl-~~~~i~~l~-----~~Gv-------D~~gvGt~l 301 (398)
T 2i1o_A 268 RSDIKIMVSGGL-DENTVKKLR-----EAGA-------EAFGVGTSI 301 (398)
T ss_dssp CTTSEEEEESSC-CHHHHHHHH-----HTTC-------CEEEECHHH
T ss_pred CCceEEEEeCCC-CHHHHHHHH-----HcCC-------CEEEeCccc
Confidence 36899999999 789999998 4787 577776543
No 389
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=62.71 E-value=1.5e+02 Score=33.54 Aligned_cols=241 Identities=12% Similarity=0.041 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHHHHc--CCCeeeee----c--chhHHhcCChhHHHHHHHHHHHHcccCccEEEEEec----cCCC-CH
Q psy10250 7 YLLETRLHEIELLAKQ--KVDEVDIV----I--QRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAV----GELK-TS 73 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~--GA~EiD~V----i--n~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt----~~L~-~~ 73 (387)
.+++.|+.=++...+. |..+|++- + .+..+..++|+.+ +.+++..++ ..+-+.+-. ||-. .+
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l----~~l~~~~~~-~~~~~l~R~~n~vgy~~~pd 626 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERL----ERLRKAIPN-VLFQMLLRASNAVGYKNYPD 626 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHH----HHHHHHCCS-SEEEEEEETTTBTCSSCCCH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHH----HHHHHhCCC-CeEEEEeccccccccccCCc
Confidence 6789999999988887 88888863 3 3345556666554 445555543 556666632 2211 34
Q ss_pred HHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhc----ccccc--cCCCC----C
Q psy10250 74 ENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIE----FIDLT--TLSGD----D 143 (387)
Q Consensus 74 e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~ID~T--~L~~~----~ 143 (387)
.-+..-.+.|.++|+|.+.....- ++...+ .......++.-. .+-+| .+.|. .
T Consensus 627 ~v~~~~v~~a~~~Gvd~irif~~~-------sd~~~~----------~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~ 689 (1150)
T 3hbl_A 627 NVIHKFVQESAKAGIDVFRIFDSL-------NWVDQM----------KVANEAVQEAGKISEGTICYTGDILNPERSNIY 689 (1150)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTT-------CCGGGG----------HHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSS
T ss_pred hhHHHHHHHHHhCCcCEEEEEeeC-------CHHHHH----------HHHHHHHHHHhhheeEEEeecccccChhhcCCC
Confidence 445666788899999998876532 212222 111222222222 22333 25443 5
Q ss_pred CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE-------CCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCC
Q psy10250 144 TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV-------YPARVVDVIKVLDRENARDDVKVASVAAGFPSGQY 216 (387)
Q Consensus 144 T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV-------~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~ 216 (387)
+.+.+.++++++. +.|+..+|+ .|..+....+.|+.. .++.+ +| |...
T Consensus 690 ~~~~~~~~a~~~~----------------~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~---~~~~i-----~~-H~Hn 744 (1150)
T 3hbl_A 690 TLEYYVKLAKELE----------------REGFHILAIKDMAGLLKPKAAYELIGELKSA---VDLPI-----HL-HTHD 744 (1150)
T ss_dssp SHHHHHHHHHHHH----------------HTTCSEEEEEETTCCCCHHHHHHHHHHHHHH---CCSCE-----EE-EECB
T ss_pred CHHHHHHHHHHHH----------------HcCCCeeeEcCccCCCCHHHHHHHHHHHHHh---cCCeE-----EE-EeCC
Confidence 6788888888887 567778876 466666666666542 23332 44 3344
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 296 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG 296 (387)
+...=++-+..|++.||+-||.-+|==.-..|+- .+..++.+... .. ++|+ + +.+.+..+++...+.-
T Consensus 745 t~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~-----~lE~lv~~L~~-~g----~~tg-i-dl~~l~~~~~~~~~~~ 812 (1150)
T 3hbl_A 745 TSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQP-----SANSLYYALNG-FP----RHLR-T-DIEGMESLSHYWSTVR 812 (1150)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCC-----BHHHHHHHTTT-SS----CCBC-S-CHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCc-----cHHHHHHHHHh-cC----CCcC-c-cHHHHHHHHHHHHHHH
Confidence 4555667788999999999999988422233443 33334433432 11 2344 4 4566777776655443
Q ss_pred CCEEEcCCCC
Q psy10250 297 SDFIKTSTGK 306 (387)
Q Consensus 297 aDfVKTSTGf 306 (387)
-.|..--+|+
T Consensus 813 ~~y~~~~~~~ 822 (1150)
T 3hbl_A 813 TYYSDFESDI 822 (1150)
T ss_dssp GGGGGGCCSC
T ss_pred hhhccccCCC
Confidence 3333333444
No 390
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=62.61 E-value=20 Score=33.62 Aligned_cols=90 Identities=13% Similarity=0.114 Sum_probs=62.6
Q ss_pred eEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC------CCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCC
Q psy10250 270 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTST------GKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGIS 343 (387)
Q Consensus 270 lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST------Gf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIr 343 (387)
+-||-|-|-..+.+...+.++.+.++|+|+||-.| .|+..|... +..+.+++.. .+.|+...-=+.
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~-------egl~~l~~~~-~~~Gl~~~te~~ 95 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGE-------KALRWMREAA-DEYGLVTVTEVM 95 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTH-------HHHHHHHHHH-HHHTCEEEEECC
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccH-------HHHHHHHHHH-HHcCCcEEEeeC
Confidence 67899999998888888889999999999999665 112223222 3444444443 568888888899
Q ss_pred CHHHHHHHHHHHHHhcCCCccCCCcceeeccchHH
Q psy10250 344 TFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLN 378 (387)
Q Consensus 344 t~~~a~~~i~l~~~~~Ga~w~~~~~~RIGtSs~~~ 378 (387)
+..++..+.+ + .+| ..||+...-+
T Consensus 96 d~~~~~~l~~-----~-vd~-----~kIga~~~~n 119 (262)
T 1zco_A 96 DTRHVELVAK-----Y-SDI-----LQIGARNSQN 119 (262)
T ss_dssp CGGGHHHHHH-----H-CSE-----EEECGGGTTC
T ss_pred CHHhHHHHHh-----h-CCE-----EEECcccccC
Confidence 9888666653 4 554 6777765443
No 391
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=62.60 E-value=7.1 Score=37.68 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEec-cCCCCHHHHHHHHHHHHHcCCCEE
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAV-GELKTSENIYYASMTAMFAGSDFI 91 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt-~~L~~~e~i~~a~~~a~~ag~dfv 91 (387)
..|+++|++.|||-|-+ =|. +. +++++.++...+ ++++|. |=+ |.+.++.. .+.|+|||
T Consensus 217 l~e~~eAl~aGaDiImL-Dn~--------s~--~~l~~av~~~~~----~v~leaSGGI-t~~~i~~~----A~tGVD~I 276 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILL-DNM--------SI--SEIKKAVDIVNG----KSVLEVSGCV-NIRNVRNI----ALTGVDYI 276 (300)
T ss_dssp HHHHHHHHHTTCSEEEE-ESC--------CH--HHHHHHHHHHTT----SSEEEEESSC-CTTTHHHH----HTTTCSEE
T ss_pred HHHHHHHHHcCCCEEEE-CCC--------CH--HHHHHHHHhhcC----ceEEEEECCC-CHHHHHHH----HHcCCCEE
Confidence 47999999999886432 122 22 677777766654 345555 445 66766643 45799998
Q ss_pred ecCCCCCCCCCCCcccccc
Q psy10250 92 KTSTGKEKTNATIPADLTR 110 (387)
Q Consensus 92 KTSTG~~~~gat~~~~~~~ 110 (387)
-+ |.-...+ ++.|++|
T Consensus 277 sv--Galthsa-~~lDisl 292 (300)
T 3l0g_A 277 SI--GCITNSF-QNKDIGL 292 (300)
T ss_dssp EC--GGGTSSC-CCCCEEE
T ss_pred Ee--CccccCC-CcceeEE
Confidence 64 4333333 5678887
No 392
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=62.53 E-value=59 Score=29.69 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=67.1
Q ss_pred CCCeEEEEECC----------ccHHHHHHHhhhcCCCCCceEEEEecCCCCCC-----CCHH---HHHHHHHHHHHCCCC
Q psy10250 173 NVHTAAVCVYP----------ARVVDVIKVLDRENARDDVKVASVAAGFPSGQ-----YLLE---TRLHEIELLAKQKVD 234 (387)
Q Consensus 173 ~~~~~aVcV~P----------~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~-----~~~e---~K~~Ea~~Ai~~GAd 234 (387)
+.||.+|-+.+ ..+...++.++. .++++.++. . |... ...+ .=...++.|.+.||+
T Consensus 47 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~----~gl~i~~~~-~-~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~ 120 (296)
T 2g0w_A 47 ENGFDGIGLRAENYVDALAAGLTDEDMLRILDE----HNMKVTEVE-Y-ITQWGTAEDRTAEQQKKEQTTFHMARLFGVK 120 (296)
T ss_dssp HTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHH----TTCEEEEEE-C-BCCCSSTTTCCHHHHHHHHHHHHHHHHHTCC
T ss_pred HcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHH----cCCceEeeh-h-hhccccCChHHHHHHHHHHHHHHHHHHcCCC
Confidence 56778887753 356667788875 688887762 3 2211 1111 112456667788999
Q ss_pred eeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec---cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 235 EVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG---ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 235 EID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
-| ++... -.-+++.+.+-++++.+.+ . -+++.+|+. .+.+.++. .++..+.|.+.++
T Consensus 121 ~v--~~g~~--~~~~~~~~~~~l~~l~~~a-~--Gv~l~lE~~~~~~~~~~~~~---~~l~~~v~~~~vg 180 (296)
T 2g0w_A 121 HI--NCGLL--EKIPEEQIIVALGELCDRA-E--ELIIGLEFMPYSGVADLQAA---WRVAEACGRDNAQ 180 (296)
T ss_dssp EE--EECCC--SCCCHHHHHHHHHHHHHHH-T--TSEEEEECCTTSSSCSHHHH---HHHHHHHTCTTEE
T ss_pred EE--EEcCC--CCCCHHHHHHHHHHHHHHh-c--CCEEEEEecCCCCCCCHHHH---HHHHHHhCCCCeE
Confidence 76 33221 1124778888888888877 3 379999984 34454444 3444555554444
No 393
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=62.49 E-value=19 Score=34.80 Aligned_cols=85 Identities=14% Similarity=0.148 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCc---hhhhcCChhHHHHHHHHHHHHhC---CCcceEEEEeeccCCChHHHHHHH
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQR---SLVLNNQWPELFSEVKQMKEKCG---EKIHMKTILAVGELKTSENIYCAS 289 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~---~~lk~g~~~~v~~Ei~~v~~~~~---~~~~lKvIlEt~~L~t~e~i~~a~ 289 (387)
...+.-+..+++.+++|||=||+-.-- ++--.++.-...+|++++..... ....+-+-|.| . ..+ ..
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT--~-~~~----Va 118 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDT--S-RPR----VM 118 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEEC--S-CHH----HH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeC--C-CHH----HH
Confidence 457788889999999999999987521 11101123345677666654442 10123344444 3 233 33
Q ss_pred HHHHHcCCCEEEcCCCCC
Q psy10250 290 MTAMFAGSDFIKTSTGKE 307 (387)
Q Consensus 290 ~ia~~aGaDfVKTSTGf~ 307 (387)
+.|+++|+|.|.--+|+.
T Consensus 119 ~aAl~aGa~iINDVsg~~ 136 (314)
T 3tr9_A 119 REAVNTGADMINDQRALQ 136 (314)
T ss_dssp HHHHHHTCCEEEETTTTC
T ss_pred HHHHHcCCCEEEECCCCC
Confidence 556667999999988864
No 394
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=62.21 E-value=20 Score=34.30 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=64.6
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCC
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTST 304 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTST 304 (387)
+..+.+.|+ +-++.. + .-+.+.+.++++++++.+..+..+.+++. ++ ......+++.++|+|+|-++-
T Consensus 43 a~av~~aGg--lG~i~~-~---~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-----~~-~~~~~~~~~~~~g~d~V~l~~ 110 (326)
T 3bo9_A 43 AAAVSEAGG--LGIIGS-G---AMKPDDLRKAISELRQKTDKPFGVNIILV-----SP-WADDLVKVCIEEKVPVVTFGA 110 (326)
T ss_dssp HHHHHHTTS--BEEEEC-T---TCCHHHHHHHHHHHHTTCSSCEEEEEETT-----ST-THHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHhCCC--cEEeCC-C---CCCHHHHHHHHHHHHHhcCCCEEEEEecc-----CC-CHHHHHHHHHHCCCCEEEECC
Confidence 444456674 334421 1 12567788899999876643233444432 11 133456778899999998754
Q ss_pred CCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 305 GKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 305 Gf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
|. +. +.++.+++ .++|+..+|.+.+++..+. .+|+|++
T Consensus 111 g~------p~------~~~~~l~~-----~g~~v~~~v~s~~~a~~a~-----~~GaD~i 148 (326)
T 3bo9_A 111 GN------PT------KYIRELKE-----NGTKVIPVVASDSLARMVE-----RAGADAV 148 (326)
T ss_dssp SC------CH------HHHHHHHH-----TTCEEEEEESSHHHHHHHH-----HTTCSCE
T ss_pred CC------cH------HHHHHHHH-----cCCcEEEEcCCHHHHHHHH-----HcCCCEE
Confidence 42 12 12333333 2567777889999999888 5899876
No 395
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=62.15 E-value=27 Score=33.07 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeeeeecchhHHhcC-ChhHHHHHHHHHHHHcccC--ccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 7 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCEEK--IHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g-~~~~v~~ei~~v~~~~~~~--~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
...+.=+..+++.++.|||-||+-.--. +-| ..-...+|+..++.+.+.- .-+.+-+-|- +.+ ..+.|
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgest--rpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~---~~~----va~aA 96 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESS--RPGATRVDPAVETSRVIPVVKELAAQGITVSIDTM---RAD----VARAA 96 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHTTCCEEEECS---CHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccC--CCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCC---CHH----HHHHH
Confidence 3567778889999999999999874221 111 1122345555555443210 0245667762 333 34456
Q ss_pred HHcCCCEEecCCCC
Q psy10250 84 MFAGSDFIKTSTGK 97 (387)
Q Consensus 84 ~~ag~dfvKTSTG~ 97 (387)
.++|++.|..-||+
T Consensus 97 l~aGa~iINdvsg~ 110 (280)
T 1eye_A 97 LQNGAQMVNDVSGG 110 (280)
T ss_dssp HHTTCCEEEETTTT
T ss_pred HHcCCCEEEECCCC
Confidence 77899999998885
No 396
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=62.05 E-value=33 Score=31.46 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=84.3
Q ss_pred CceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEE------
Q psy10250 201 DVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL------ 274 (387)
Q Consensus 201 ~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIl------ 274 (387)
.+++|+.+ .|..+.+.-..+++.+.+.|+|=|.+-+|+ +..-+.+.+.+-++.+++.+++ +.+|+
T Consensus 3 ~p~Icvpi----~~~~~~~e~~~~~~~~~~~~~D~vElRvD~--l~~~~~~~v~~~~~~lr~~~~~---~PiI~T~R~~~ 73 (238)
T 1sfl_A 3 HVEVVATI----TPQLSIEETLIQKINHRIDAIDVLELRIDQ--FENVTVDQVAEMITKLKVMQDS---FKLLVTYRTKL 73 (238)
T ss_dssp CCEEEEEE----CCCC---CHHHHHHHHTTTTCSEEEEECTT--STTCCHHHHHHHHHHHC---CC---SEEEEECCBGG
T ss_pred CCeEEEEe----cCCCCHHHHHHHHHHhhhcCCCEEEEEecc--cccCCHHHHHHHHHHHHHhccC---CCEEEEeeccc
Confidence 35777775 342344445677888889999999999996 3333567777777777765543 45555
Q ss_pred eeccCC-ChHHHHHHHHHHHHc-CCCEEEc--CC--C--------------CCC-------CCCChhhhHhHHHHHHHHH
Q psy10250 275 AVGELK-TSENIYCASMTAMFA-GSDFIKT--ST--G--------------KEK-------TNATIPAGIIMCSAIKHFH 327 (387)
Q Consensus 275 Et~~L~-t~e~i~~a~~ia~~a-GaDfVKT--ST--G--------------f~~-------~gat~~~~~~m~~~v~~~~ 327 (387)
|-|... ++++-.+..+.+++. |+|||=- ++ + ... -.-||.. ..|.+-++.+.
T Consensus 74 eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~-~el~~~~~~~~ 152 (238)
T 1sfl_A 74 QGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPL-DELQFIFFKMQ 152 (238)
T ss_dssp GTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCH-HHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCH-HHHHHHHHHHH
Confidence 323321 455555677778876 6999852 11 1 000 1234532 22223333332
Q ss_pred HHcCCCceEeEeccCCCHHHHHHHHHHHHH
Q psy10250 328 KLSGKKIGLKPAGGISTFEDSVRWIYLVLI 357 (387)
Q Consensus 328 ~~~~~~~gIKasGGIrt~~~a~~~i~l~~~ 357 (387)
+ .|-.+ +|.+.=-++.+|.+.++.+..+
T Consensus 153 ~-~gaDi-vKia~~a~~~~D~l~ll~~~~~ 180 (238)
T 1sfl_A 153 K-FNPEY-VKLAVMPHNKNDVLNLLQAMST 180 (238)
T ss_dssp T-TCCSE-EEEEECCSSHHHHHHHHHHHHH
T ss_pred H-cCCCE-EEEEecCCCHHHHHHHHHHHHH
Confidence 2 24344 8999999999999999875443
No 397
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=61.92 E-value=19 Score=34.18 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=40.0
Q ss_pred HHHHHHHcCCCEEEc-----CCCCCCCCCChhhhHhHHHHHHHHHHHcCCC-ceEeEeccCCCHHHHHHHHHHHHHhcCC
Q psy10250 288 ASMTAMFAGSDFIKT-----STGKEKTNATIPAGIIMCSAIKHFHKLSGKK-IGLKPAGGISTFEDSVRWIYLVLIMLGP 361 (387)
Q Consensus 288 a~~ia~~aGaDfVKT-----STGf~~~gat~~~~~~m~~~v~~~~~~~~~~-~gIKasGGIrt~~~a~~~i~l~~~~~Ga 361 (387)
.|+...+.|++.|-- .||.+ -.+++ -++.+++.. .+ +.|=+.|||.|.+||...+ ++|+
T Consensus 137 ~ak~l~~~G~~aVmPlg~pIGsG~G--i~~~~-------~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~Am-----eLGA 201 (268)
T 2htm_A 137 LAKRLAALGTATVMPLAAPIGSGWG--VRTRA-------LLELFAREK-ASLPPVVVDAGLGLPSHAAEVM-----ELGL 201 (268)
T ss_dssp HHHHHHHHTCSCBEEBSSSTTTCCC--STTHH-------HHHHHHHTT-TTSSCBEEESCCCSHHHHHHHH-----HTTC
T ss_pred HHHHHHhcCCCEEEecCccCcCCcc--cCCHH-------HHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHH-----HcCC
Confidence 455566689998854 23321 22443 345555522 33 6777899999999999999 6998
Q ss_pred C
Q psy10250 362 D 362 (387)
Q Consensus 362 ~ 362 (387)
+
T Consensus 202 d 202 (268)
T 2htm_A 202 D 202 (268)
T ss_dssp C
T ss_pred C
Confidence 5
No 398
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=61.45 E-value=74 Score=29.88 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHHHCC-CCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC---ChHHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK---TSENIYCASMTA 292 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~G-AdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~---t~e~i~~a~~ia 292 (387)
.-+....-.+.+++.| ++-||+=+... .+.++++++.++. ...|||+--..+. +.+++..-.+-+
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDvEl~~~----------~~~~~~l~~~a~~-~~~kvI~S~Hdf~~tP~~~el~~~~~~~ 185 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDLELFTG----------DDEVKATVGYAHQ-HNVAVIMSNHDFHKTPAAEEIVQRLRKM 185 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEEGGGC----------HHHHHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECcCC----------HHHHHHHHHHHHh-CCCEEEEEeecCCCCcCHHHHHHHHHHH
Confidence 3567888888999999 89999865442 2345555554432 3579999765332 356777777778
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHH
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKL 329 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~ 329 (387)
...|||.+|=.+ ..-+.+++..+++..+.+++.
T Consensus 186 ~~~GaDIvKia~----~a~s~~Dvl~Ll~~~~~~~~~ 218 (276)
T 3o1n_A 186 QELGADIPKIAV----MPQTKADVLTLLTATVEMQER 218 (276)
T ss_dssp HHTTCSEEEEEE----CCSSHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEe----cCCChHHHHHHHHHHHHHHhc
Confidence 889999999654 245677777777766666554
No 399
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=61.40 E-value=40 Score=30.38 Aligned_cols=118 Identities=8% Similarity=0.027 Sum_probs=67.4
Q ss_pred CCCeEEEEECCc-----------cHHHHHHHhhhcCCCCCceEEEEecCCCCCCC--CHH----HHHHHHHHHHHCCCCe
Q psy10250 173 NVHTAAVCVYPA-----------RVVDVIKVLDRENARDDVKVASVAAGFPSGQY--LLE----TRLHEIELLAKQKVDE 235 (387)
Q Consensus 173 ~~~~~aVcV~P~-----------~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~--~~e----~K~~Ea~~Ai~~GAdE 235 (387)
++||.+|-+.+. .+...++.++. .++++.++. .|+.... ..+ .=...++.|.+.|++-
T Consensus 26 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~----~gl~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~ 100 (286)
T 3dx5_A 26 ENGFEGIELWGTHAQNLYMQEYETTERELNCLKD----KTLEITMIS-DYLDISLSADFEKTIEKCEQLAILANWFKTNK 100 (286)
T ss_dssp HTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGG----GTCCEEEEE-CCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HhCCCEEEEcccccccccccCHHHHHHHHHHHHH----cCCeEEEEe-cCCCCCCchhHHHHHHHHHHHHHHHHHhCCCE
Confidence 678888888532 33445566664 588888773 4531111 111 1123466777789988
Q ss_pred eeeecCchhhh-----cCChhHHHHHHHHHHHHhCCCcceEEEEeec---cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 236 VDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVG---ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 236 ID~Vin~~~lk-----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
|=+. .+... ...|+.+.+-++.+.+.+.. .-+++-+|+. .+.+.++ +.++..+.|.+.++
T Consensus 101 v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~---~~~l~~~~~~~~vg 168 (286)
T 3dx5_A 101 IRTF--AGQKGSADFSQQERQEYVNRIRMICELFAQ-HNMYVLLETHPNTLTDTLPS---TLELLGEVDHPNLK 168 (286)
T ss_dssp EEEC--SCSSCGGGSCHHHHHHHHHHHHHHHHHHHH-TTCEEEEECCTTSTTSSHHH---HHHHHHHHCCTTEE
T ss_pred EEEc--CCCCCcccCcHHHHHHHHHHHHHHHHHHHH-hCCEEEEecCCCcCcCCHHH---HHHHHHhcCCCCeE
Confidence 6443 23221 12356666777777776653 3489999986 3334444 44555555655554
No 400
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=61.36 E-value=25 Score=31.41 Aligned_cols=85 Identities=11% Similarity=0.009 Sum_probs=54.1
Q ss_pred CCCeEEEEECCcc---------HHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCch
Q psy10250 173 NVHTAAVCVYPAR---------VVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRS 243 (387)
Q Consensus 173 ~~~~~aVcV~P~~---------v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~ 243 (387)
++||.+|-+.+.+ +...++.+++ .++++.++ +.+.. ...+.=...++.|.+.|++-|=+. .+
T Consensus 41 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~----~gl~i~~~--~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~--p~ 111 (257)
T 3lmz_A 41 RLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAA----HKVTGYAV--GPIYM-KSEEEIDRAFDYAKRVGVKLIVGV--PN 111 (257)
T ss_dssp HTTCCEEEECTTTSCTTCCHHHHHHHHHHHHH----TTCEEEEE--EEEEE-CSHHHHHHHHHHHHHHTCSEEEEE--EC
T ss_pred HhCCCEEEEecccCCCCCCHHHHHHHHHHHHH----cCCeEEEE--ecccc-CCHHHHHHHHHHHHHhCCCEEEec--CC
Confidence 6788888887643 3566777775 68888766 33333 455555566888889999986543 22
Q ss_pred hhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec
Q psy10250 244 LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG 277 (387)
Q Consensus 244 ~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~ 277 (387)
. +.++++.+.+.. .-+++-+|+.
T Consensus 112 -------~---~~l~~l~~~a~~-~gv~l~lEn~ 134 (257)
T 3lmz_A 112 -------Y---ELLPYVDKKVKE-YDFHYAIHLH 134 (257)
T ss_dssp -------G---GGHHHHHHHHHH-HTCEEEEECC
T ss_pred -------H---HHHHHHHHHHHH-cCCEEEEecC
Confidence 1 223344444433 3479999987
No 401
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=61.31 E-value=1.1e+02 Score=28.80 Aligned_cols=145 Identities=12% Similarity=0.061 Sum_probs=92.2
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.
T Consensus 15 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~ 91 (301)
T 1xky_A 15 TIATAMV-TPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSN 91 (301)
T ss_dssp SEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCS
T ss_pred ceEEeeE-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCC
Confidence 3433334 445 4567777777888999999999996555445555444555555666667776654 47899999998
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKK 333 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~ 333 (387)
++ ++..+.++.|.++|+|.+=-.+=|... .|.+....-+ +.++.+.+ .++=
T Consensus 92 ~t-~~ai~la~~A~~~Gadavlv~~P~y~~-~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 168 (301)
T 1xky_A 92 NT-HASIDLTKKATEVGVDAVMLVAPYYNK-PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE-IENI 168 (301)
T ss_dssp CH-HHHHHHHHHHHHTTCSEEEEECCCSSC-CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT-STTE
T ss_pred CH-HHHHHHHHHHHhcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc-CCCE
Confidence 66 456678889999999987655544221 2322222111 23333332 4667
Q ss_pred ceEeEeccCCCHHHHHHHHH
Q psy10250 334 IGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 334 ~gIKasGGIrt~~~a~~~i~ 353 (387)
+|||-|.| +..+..+++.
T Consensus 169 vgiKdssg--d~~~~~~~~~ 186 (301)
T 1xky_A 169 VAIKDAGG--DVLTMTEIIE 186 (301)
T ss_dssp EEEEECSS--CHHHHHHHHH
T ss_pred EEEEcCCC--CHHHHHHHHH
Confidence 89999877 5666666664
No 402
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=61.11 E-value=68 Score=30.07 Aligned_cols=91 Identities=16% Similarity=0.028 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHHHH-cCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~-~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
|.-..+.=..-+++.++ .|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ -.+.++.|
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~-ai~la~~a 95 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNLKE-AVELGKYA 95 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHH-HHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCHHH-HHHHHHHH
Confidence 44555556677889999 999885333333444433456666666777776665 378999999886544 55677888
Q ss_pred HHcCCCEEecCCCCC
Q psy10250 84 MFAGSDFIKTSTGKE 98 (387)
Q Consensus 84 ~~ag~dfvKTSTG~~ 98 (387)
.++|+|.+=-.+=|.
T Consensus 96 ~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 96 TELGYDCLSAVTPFY 110 (293)
T ss_dssp HHHTCSEEEEECCCS
T ss_pred HhcCCCEEEECCCCC
Confidence 999999986655543
No 403
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=61.05 E-value=50 Score=30.51 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=25.7
Q ss_pred HHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 322 AIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 322 ~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
-|+.+++.+ ..+.+=+-|||||.+|+.+++ . |++
T Consensus 172 ~i~~i~~~~-~~~Pv~vGgGI~t~e~a~~~~-----~-gAd 205 (240)
T 1viz_A 172 AVKKTKAVL-ETSTLFYGGGIKDAETAKQYA-----E-HAD 205 (240)
T ss_dssp HHHHHHHTC-SSSEEEEESSCCSHHHHHHHH-----T-TCS
T ss_pred HHHHHHHhc-CCCCEEEEeccCCHHHHHHHH-----h-CCC
Confidence 455555553 256788899999999999988 5 884
No 404
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.02 E-value=43 Score=31.36 Aligned_cols=193 Identities=15% Similarity=0.101 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy10250 8 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAG 87 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag 87 (387)
..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ -.+.++.|.++|
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~-ai~la~~a~~~G 95 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCTEE-AIELSVFAEDVG 95 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSHHH-HHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHH-HHHHHHHHHhcC
Confidence 34444566888999999885433333333333455555666666766655 378999999875544 556778889999
Q ss_pred CCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHhcCCC
Q psy10250 88 SDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKAIQPL 159 (387)
Q Consensus 88 ~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A~~~~ 159 (387)
+|.+=-.+=|.... ++ +.-.++++.++.-.|.-+ -.-+.+.+.+.++.++ .
T Consensus 96 adavlv~~P~y~~~----------------s~-~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~--- 154 (289)
T 2yxg_A 96 ADAVLSITPYYNKP----------------TQ-EGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEE-Y--- 154 (289)
T ss_dssp CSEEEEECCCSSCC----------------CH-HHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH-C---
T ss_pred CCEEEECCCCCCCC----------------CH-HHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHh-C---
Confidence 99987655543221 11 222223334443333221 1235688888888643 2
Q ss_pred cHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCee-ee
Q psy10250 160 SEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEV-DI 238 (387)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEI-D~ 238 (387)
-++.+|=-...-+....+++.. .++. .. .|.... .-.++..|++-. -.
T Consensus 155 --------------pnivgiK~s~gd~~~~~~~~~~----~~f~--v~-----~G~d~~------~~~~l~~G~~G~is~ 203 (289)
T 2yxg_A 155 --------------SNISAVKEANPNLSQVSELIHD----AKIT--VL-----SGNDEL------TLPIIALGGKGVISV 203 (289)
T ss_dssp --------------TTEEEEEECCSCTHHHHHHHHH----TCSE--EE-----ESCGGG------HHHHHHTTCCEEEES
T ss_pred --------------CCEEEEEeCCCCHHHHHHHHHh----CCeE--EE-----ECcHHH------HHHHHHCCCCEEEeC
Confidence 2566665555555665555543 1222 23 133222 334667888753 33
Q ss_pred ecCc---------hhhhcCChhHHHH
Q psy10250 239 VIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 239 Vin~---------~~lk~g~~~~v~~ 255 (387)
.-|+ .++++||++..++
T Consensus 204 ~~n~~P~~~~~l~~a~~~Gd~~~A~~ 229 (289)
T 2yxg_A 204 VANIVPKEFVEMVNYALEGDFEKARE 229 (289)
T ss_dssp GGGTCHHHHHHHHHHHHHTCHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHCCCHHHHHH
Confidence 3442 5667788776554
No 405
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.96 E-value=86 Score=29.48 Aligned_cols=95 Identities=16% Similarity=0.032 Sum_probs=67.5
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
.=|+.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.++ ++-.+.
T Consensus 11 TPf~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~l 87 (297)
T 2rfg_A 11 TPFINGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG--RVPVIAGAGSNNP-VEAVRY 87 (297)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSH-HHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEccCCCCH-HHHHHH
Confidence 4554566677777788999999999985444444444444455555566666776664 4789999999866 455677
Q ss_pred HHHHHHcCCCEEEcCCCC
Q psy10250 289 SMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf 306 (387)
++.|.++|+|.+=-.+=|
T Consensus 88 a~~A~~~Gadavlv~~P~ 105 (297)
T 2rfg_A 88 AQHAQQAGADAVLCVAGY 105 (297)
T ss_dssp HHHHHHHTCSEEEECCCT
T ss_pred HHHHHhcCCCEEEEcCCC
Confidence 889999999988766654
No 406
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=60.94 E-value=1.3e+02 Score=29.50 Aligned_cols=137 Identities=9% Similarity=0.086 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC
Q psy10250 218 LETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 296 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG 296 (387)
.+.-+.+++.+++. |.+-+=+=+ | .+.+.-.+-+++|+++. + -+.+.+....-=+.++-.+.++...+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~Kv--G----~~~~~d~~~v~avR~~~-~--~~~l~vDaN~~w~~~~A~~~~~~l~~~~ 239 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKG--T----TDCAGDVAILRAVREAL-P--GVNLRVDPNAAWSVPDSVRAGIALEELD 239 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEC--C----SCHHHHHHHHHHHHHHC-T--TSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEec--C----CCHHHHHHHHHHHHHhC-C--CCeEEeeCCCCCCHHHHHHHHHHHhhcC
Confidence 47778889999999 999876543 2 24455556677788887 4 2577777643336677777778778889
Q ss_pred CCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cc
Q psy10250 297 SDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SS 375 (387)
Q Consensus 297 aDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss 375 (387)
.+||--+.- .+ +..+.+++.+ .+.|=+-.-+.+..++..++. .-.+++++++..|+|. +.
T Consensus 240 i~~iEqP~~------d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~~k~~~~GGit~ 300 (398)
T 4dye_A 240 LEYLEDPCV------GI-------EGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMR----LNAVDVIHGDVYKWGGIAA 300 (398)
T ss_dssp CSEEECCSS------HH-------HHHHHHHHHC--CSCEEESSSCCSGGGHHHHHH----TTCCSEEEECHHHHTSHHH
T ss_pred CCEEcCCCC------CH-------HHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHH----hCCCCEEEeCccccCCHHH
Confidence 999985442 22 3555565554 355555456789999999995 2347788888888864 55
Q ss_pred hHHHHHH
Q psy10250 376 LLNNILQ 382 (387)
Q Consensus 376 ~~~il~~ 382 (387)
.+++..-
T Consensus 301 ~~~ia~~ 307 (398)
T 4dye_A 301 TKALAAH 307 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555543
No 407
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=60.76 E-value=61 Score=30.61 Aligned_cols=91 Identities=15% Similarity=0.057 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ ..+.++.|.
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~-ai~la~~A~ 103 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCVSTAE-SQQLAASAK 103 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHH-HHHHHHHHH
Confidence 44455555677889999999885333333333333456666666667776655 378999999885544 556778889
Q ss_pred HcCCCEEecCCCCC
Q psy10250 85 FAGSDFIKTSTGKE 98 (387)
Q Consensus 85 ~ag~dfvKTSTG~~ 98 (387)
++|+|.+=-.+=|.
T Consensus 104 ~~Gadavlv~~P~y 117 (303)
T 2wkj_A 104 RYGFDAVSAVTPFY 117 (303)
T ss_dssp HHTCSEEEEECCCS
T ss_pred hCCCCEEEecCCCC
Confidence 99999986655543
No 408
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.69 E-value=25 Score=34.61 Aligned_cols=68 Identities=22% Similarity=0.311 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEe
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIK 92 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvK 92 (387)
...++.+++.|+|-|.+ |.+. |+.+.+.+.++.+++..++ ++||+-.. .+.++ ++.+.++|+|||.
T Consensus 155 ~~~a~~~~~~G~d~i~i--~~~~---g~~~~~~e~i~~ir~~~~~---~pviv~~v--~~~~~----a~~a~~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVI--DSAH---GHSTRIIELIKKIKTKYPN---LDLIAGNI--VTKEA----ALDLISVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEE--CCSC---CSSHHHHHHHHHHHHHCTT---CEEEEEEE--CSHHH----HHHHHTTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEE--eCCC---CChHHHHHHHHHHHHHCCC---CeEEEcCC--CcHHH----HHHHHhcCCCEEE
Confidence 45577788899998665 5432 5667777888888877642 46676332 24443 3456789999999
Q ss_pred cC
Q psy10250 93 TS 94 (387)
Q Consensus 93 TS 94 (387)
-+
T Consensus 221 vg 222 (404)
T 1eep_A 221 VG 222 (404)
T ss_dssp EC
T ss_pred EC
Confidence 83
No 409
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=60.65 E-value=29 Score=33.91 Aligned_cols=94 Identities=15% Similarity=0.230 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcC-C----CCCCCCCChhhhHhHHHHH
Q psy10250 249 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS-T----GKEKTNATIPAGIIMCSAI 323 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTS-T----Gf~~~gat~~~~~~m~~~v 323 (387)
+.+.+.+.+++++++ +-+..+++ +- ....+ ..+.+.++|+|++-.. + ++.....+. .+|
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v----~~-~~~~e---~a~~~~~agad~i~i~~~~~~~~~~~~~~~~-------~~i 203 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRV----SP-QNVRE---IAPIVIKAGADLLVIQGTLISAEHVNTGGEA-------LNL 203 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEE----CT-TTHHH---HHHHHHHTTCSEEEEECSSCCSSCCCC------------CH
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEe----CC-ccHHH---HHHHHHHCCCCEEEEeCCccccccCCCcccH-------HHH
Confidence 666777777777653 22122222 21 12222 2344567899999542 1 121110122 245
Q ss_pred HHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCC
Q psy10250 324 KHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 366 (387)
Q Consensus 324 ~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~ 366 (387)
+.+++..+-.+-+ |||.|.++|..++ ++|++.+.-
T Consensus 204 ~~l~~~~~~pvi~---ggi~t~e~a~~~~-----~~Gad~i~v 238 (393)
T 2qr6_A 204 KEFIGSLDVPVIA---GGVNDYTTALHMM-----RTGAVGIIV 238 (393)
T ss_dssp HHHHHHCSSCEEE---ECCCSHHHHHHHH-----TTTCSEEEE
T ss_pred HHHHHhcCCCEEE---CCcCCHHHHHHHH-----HcCCCEEEE
Confidence 6666665444444 8999999999999 699986533
No 410
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=60.43 E-value=65 Score=30.50 Aligned_cols=196 Identities=10% Similarity=0.043 Sum_probs=115.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 4 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
.|.-..+.=..-+++.++.|++-|=+.=..|..-+=.+++-.+=++.+++.+.+ .+.||.=+|-.++ ++..+.++.|
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~la~~a 106 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTYDT-AHSIRLAKAC 106 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCH-HHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCH-HHHHHHHHHH
Confidence 355556666677889999999986333233433333456656666666676655 3799999998865 4455677888
Q ss_pred HHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccC--------CCCCCHHHHHHHHHHh
Q psy10250 84 MFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTL--------SGDDTEAVVETLTLKA 155 (387)
Q Consensus 84 ~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L--------~~~~T~~~i~~l~~~A 155 (387)
.++|+|.+=-.+=|.... ++ +.-..+++.++...|.-++ .-+.+.+.+.++. .
T Consensus 107 ~~~Gadavlv~~P~y~~~----------------s~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La--~ 167 (304)
T 3l21_A 107 AAEGAHGLLVVTPYYSKP----------------PQ-RGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA--S 167 (304)
T ss_dssp HHHTCSEEEEECCCSSCC----------------CH-HHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH--T
T ss_pred HHcCCCEEEECCCCCCCC----------------CH-HHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh--c
Confidence 999999987666543221 11 2223344555555444321 3467888888886 1
Q ss_pred cCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCe
Q psy10250 156 IQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDE 235 (387)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdE 235 (387)
. -++.++=-...-+....+.+.. .++.| . .| .... .-.++..|++-
T Consensus 168 ~-----------------pnIvgiKdssgd~~~~~~~~~~----~~f~v--~-~G----~d~~------~l~~l~~Ga~G 213 (304)
T 3l21_A 168 H-----------------PNIVGVXDAKADLHSGAQIMAD----TGLAY--Y-SG----DDAL------NLPWLRMGATG 213 (304)
T ss_dssp S-----------------TTEEEEEECSCCHHHHHHHHHH----HCCEE--E-ES----SGGG------HHHHHHHTCCE
T ss_pred C-----------------CCEEEEECCCCCHHHHHHHhcC----CCeEE--E-eC----chHH------HHHHHHcCCCE
Confidence 2 2677776666666666666542 34443 3 23 2222 23567778887
Q ss_pred e-eeecCc---------hhhhcCChhHHHH
Q psy10250 236 V-DIVIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 236 I-D~Vin~---------~~lk~g~~~~v~~ 255 (387)
. -..-|+ .++++||++..++
T Consensus 214 ~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~ 243 (304)
T 3l21_A 214 FISVIAHLAAGQLRELLSAFGSGDIATARK 243 (304)
T ss_dssp EEESTHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred EEecHHhhhHHHHHHHHHHHHcCCHHHHHH
Confidence 5 222232 4455677665544
No 411
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=60.34 E-value=63 Score=31.68 Aligned_cols=139 Identities=6% Similarity=0.028 Sum_probs=87.1
Q ss_pred HHHHHHHHCCCCeeeeecCc-hhhh--cC-----ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 223 HEIELLAKQKVDEVDIVIQR-SLVL--NN-----QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~-~~lk--~g-----~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
..++.+++.|.+-+=+=+.. .... .| +.+.-.+=+++|++++++ -+.+.+...---+.++-.+.++...+
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g~--~~~l~vDaN~~~~~~~A~~~~~~L~~ 235 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVGD--KMDIMVEFHSMWQLLPAMQIAKALTP 235 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHGG--GSEEEEECTTCBCHHHHHHHHHHTGG
T ss_pred HHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcCC--CceEEEECCCCCCHHHHHHHHHHHhh
Confidence 45668899999887442210 0000 11 123334456777787774 35677776433366777777787888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcC-CCccCCCcceee-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWLNKDLFRIG- 372 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~G-a~w~~~~~~RIG- 372 (387)
.|.+||--+... -+++ ..+.+++.+ ++.|-+-+.+.+..++..++. .| ++.++++..|+|
T Consensus 236 ~~i~~iEeP~~~----~~~~-------~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~-----~~a~d~v~~d~~~~GG 297 (400)
T 4dxk_A 236 YQTFWHEDPIKM----DSLS-------SLTRYAAVS--PAPISASETLGSRWAFRDLLE-----TGAAGVVMLDISWCGG 297 (400)
T ss_dssp GCCSEEECCBCT----TSGG-------GHHHHHHHC--SSCEEECTTCCHHHHHHHHHH-----TTCCCEEEECTTTTTH
T ss_pred cCCCEEEcCCCc----ccHH-------HHHHHHHhC--CCCEEecCCcCCHHHHHHHHH-----cCCCCEEEeCccccCC
Confidence 899999965531 1222 334445443 466666677899999999994 55 677788888885
Q ss_pred ccchHHHHH
Q psy10250 373 ASSLLNNIL 381 (387)
Q Consensus 373 tSs~~~il~ 381 (387)
-+.++++..
T Consensus 298 it~~~kia~ 306 (400)
T 4dxk_A 298 LSEARKIAS 306 (400)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455655544
No 412
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=60.32 E-value=19 Score=36.11 Aligned_cols=73 Identities=19% Similarity=0.328 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEe
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIK 92 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvK 92 (387)
..+++++++.|+|.| ++.. -.|++....+.+..+++..+. +.+| .|-..+.+ .+..+.++|+|+|+
T Consensus 235 ~~~a~~l~~~G~d~i--vi~~---a~g~~~~~~~~i~~l~~~~p~---~pvi--~G~v~t~~----~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 235 FERAEALFEAGADAI--VIDT---AHGHSAGVLRKIAEIRAHFPN---RTLI--AGNIATAE----GARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHTCSEE--EECC---SCTTCHHHHHHHHHHHHHCSS---SCEE--EEEECSHH----HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCeE--EEee---ecCcchhHHHHHHHHHHHCCC---CcEe--CCCccCHH----HHHHHHHcCCCEEE
Confidence 467899999999984 3443 236777777888888877632 2344 44444543 34466789999999
Q ss_pred cCCCCCC
Q psy10250 93 TSTGKEK 99 (387)
Q Consensus 93 TSTG~~~ 99 (387)
.+.|++.
T Consensus 301 vg~g~g~ 307 (491)
T 1zfj_A 301 VGIGPGS 307 (491)
T ss_dssp ECSSCCT
T ss_pred ECccCCc
Confidence 9888654
No 413
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.27 E-value=1.2e+02 Score=29.00 Aligned_cols=95 Identities=17% Similarity=0.138 Sum_probs=69.6
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .+.||.=++-.++ ++..+
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st-~eai~ 120 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRT-DEAVA 120 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSH-HHHHH
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCH-HHHHH
Confidence 445 4577778888888999999999996555445555444556666666677777764 5789999999866 45567
Q ss_pred HHHHHHHcCCCEEEcCCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf 306 (387)
.++.|.++|+|.+=-.+=|
T Consensus 121 la~~A~~~Gadavlv~~P~ 139 (332)
T 2r8w_A 121 LAKDAEAAGADALLLAPVS 139 (332)
T ss_dssp HHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHhcCCCEEEECCCC
Confidence 8889999999988665554
No 414
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=60.22 E-value=19 Score=32.52 Aligned_cols=120 Identities=10% Similarity=-0.055 Sum_probs=65.3
Q ss_pred CCCeEEEEECCc--------cHHHHHHHhhhcCCCCCceEEEEecCCCC----CCCCHH-------HHHHHHHHHHHCCC
Q psy10250 173 NVHTAAVCVYPA--------RVVDVIKVLDRENARDDVKVASVAAGFPS----GQYLLE-------TRLHEIELLAKQKV 233 (387)
Q Consensus 173 ~~~~~aVcV~P~--------~v~~a~~~L~~~~~~~~v~v~tVvigFP~----G~~~~e-------~K~~Ea~~Ai~~GA 233 (387)
+.||.+|-+.+. .+...++.++. .++++.+. .+||. +....+ .=..-++.|.+.|+
T Consensus 28 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~----~gl~~~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~ 102 (290)
T 2qul_A 28 GLGFDLMEISLGEFHNLSDAKKRELKAVADD----LGLTVMCC-IGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGA 102 (290)
T ss_dssp HTTCSEEEEESTTGGGSCHHHHHHHHHHHHH----HTCEEEEE-EEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCCEEEEecCCccccchhhHHHHHHHHHH----cCCceEEe-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 567777776543 24566777775 58888887 46663 222222 22234556777899
Q ss_pred CeeeeecC--chh--hh-----cCChhHHHHHHHHHHHHhCCCcceEEEEeec------cCCChHHHHHHHHHHHHcCCC
Q psy10250 234 DEVDIVIQ--RSL--VL-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSD 298 (387)
Q Consensus 234 dEID~Vin--~~~--lk-----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~------~L~t~e~i~~a~~ia~~aGaD 298 (387)
+-|=+..+ .+. +. ...|+.+.+-++++.+.+.. .-+++-||+. .+.+.++.. +++.+.|.+
T Consensus 103 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~~~---~l~~~~~~~ 178 (290)
T 2qul_A 103 PVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAED-YGIIYALEVVNRFEQWLCNDAKEAI---AFADAVDSP 178 (290)
T ss_dssp SEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHH-HTCEEEEECCCTTTCSSCCSHHHHH---HHHHHHCCT
T ss_pred CEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEeCccccccccCCHHHHH---HHHHHcCCC
Confidence 87632221 122 11 11244555556666655543 3489999974 344555443 444555554
Q ss_pred EEE
Q psy10250 299 FIK 301 (387)
Q Consensus 299 fVK 301 (387)
.++
T Consensus 179 ~~g 181 (290)
T 2qul_A 179 ACK 181 (290)
T ss_dssp TEE
T ss_pred CEE
Confidence 443
No 415
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=60.21 E-value=42 Score=31.85 Aligned_cols=88 Identities=14% Similarity=-0.000 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy10250 8 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAG 87 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag 87 (387)
..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ -.+.++.|.++|
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st~~-ai~la~~A~~~G 107 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNSTEK-TLKLVKQAEKLG 107 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHH-HHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccHHH-HHHHHHHHHhcC
Confidence 34444566888999999885443344444444456666666777776665 368999999886544 556778889999
Q ss_pred CCEEecCCCCC
Q psy10250 88 SDFIKTSTGKE 98 (387)
Q Consensus 88 ~dfvKTSTG~~ 98 (387)
+|.+=-.+=|.
T Consensus 108 adavlv~~P~y 118 (306)
T 1o5k_A 108 ANGVLVVTPYY 118 (306)
T ss_dssp CSEEEEECCCS
T ss_pred CCEEEECCCCC
Confidence 99976655543
No 416
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=60.06 E-value=23 Score=31.85 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCCEEEcCC--C-CCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 287 CASMTAMFAGSDFIKTST--G-KEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTST--G-f~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
..++.+.++|+|+|.-.+ | |.+. +.. +.++.+++.+ .+.+=+-|||++.+++..++ .+|++
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~---~~~-----~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l-----~~Gad 99 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTG---DNR-----ALIAEVAQAM--DIKVELSGGIRDDDTLAAAL-----ATGCT 99 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSC---CCH-----HHHHHHHHHC--SSEEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCC---ChH-----HHHHHHHHhc--CCcEEEECCcCCHHHHHHHH-----HcCCC
Confidence 445778889999997653 2 2111 111 2345555554 46677789999999999999 58984
No 417
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=60.00 E-value=24 Score=32.96 Aligned_cols=77 Identities=9% Similarity=0.044 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHc-
Q psy10250 8 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFA- 86 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~a- 86 (387)
..+.=+..+++.++.|||=||+-... ..-...+|++.++.......-+.+.|-|. +.+-++ .|.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~------~~v~~~ee~~rvv~~i~~~~~~pisIDT~---~~~v~~----aAl~a~ 89 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGP------AVQDKVSAMEWLVEVTQEVSNLTLCLDST---NIKAIE----AGLKKC 89 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------CHHHHHHHHHHHHHTTCCSEEEEECS---CHHHHH----HHHHHC
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCC------CCCChHHHHHHHHHHHHHhCCCeEEEeCC---CHHHHH----HHHhhC
Confidence 34555677899999999999997621 12235678888887765422355677773 444333 44555
Q ss_pred -CCCEEecCCCC
Q psy10250 87 -GSDFIKTSTGK 97 (387)
Q Consensus 87 -g~dfvKTSTG~ 97 (387)
|++.|..-||+
T Consensus 90 ~Ga~iINdvs~~ 101 (262)
T 1f6y_A 90 KNRAMINSTNAE 101 (262)
T ss_dssp SSCEEEEEECSC
T ss_pred CCCCEEEECCCC
Confidence 99999877774
No 418
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=60.00 E-value=17 Score=32.32 Aligned_cols=67 Identities=16% Similarity=0.180 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 285 IYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
....++.+.++|+|+|--+. ....+.... ...+.++.+++.+ .+.|=+.|||++.+++..++ .+|++
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~-~~~~~~~~~---~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~-----~~Gad 101 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILD-ITAAPEGRA---TFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLF-----RAGAD 101 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEE-CCCCTTTHH---HHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred HHHHHHHHHHcCCCEEEEEe-CCccccCCc---ccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH-----HcCCC
Confidence 44566778899999775432 111111111 1234566666654 46666899999999998888 47885
No 419
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=59.97 E-value=1.1e+02 Score=28.51 Aligned_cols=133 Identities=10% Similarity=0.046 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc--
Q psy10250 218 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-- 295 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a-- 295 (387)
.+.-+..+++.++.|||=||+-.--+ ...+++.+..=|+.+++.+ .+-+.|.|. ..+- .+.|.++
T Consensus 33 ~~~a~~~a~~~v~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~----~~pisIDT~---~~~v----~~aal~a~~ 99 (271)
T 2yci_X 33 PRPIQEWARRQAEKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVV----DLPCCLDST---NPDA----IEAGLKVHR 99 (271)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHC----CCCEEEECS---CHHH----HHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhC----CCeEEEeCC---CHHH----HHHHHHhCC
Confidence 46667788999999999999986552 1123444444455555433 244677775 3332 3445556
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe--ccC-CC----HHHHHHHHHHHHHhcCCC----cc
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA--GGI-ST----FEDSVRWIYLVLIMLGPD----WL 364 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas--GGI-rt----~~~a~~~i~l~~~~~Ga~----w~ 364 (387)
|++.|..-+|.. +....|+..++. .+-.+-+-.. .|+ +| .+.+.+.+..+. .+|.. ++
T Consensus 100 Ga~iINdvs~~~------d~~~~~~~~~a~----~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~-~~Gi~~~~Iil 168 (271)
T 2yci_X 100 GHAMINSTSADQ------WKMDIFFPMAKK----YEAAIIGLTMNEKGVPKDANDRSQLAMELVANAD-AHGIPMTELYI 168 (271)
T ss_dssp SCCEEEEECSCH------HHHHHHHHHHHH----HTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHH-HTTCCGGGEEE
T ss_pred CCCEEEECCCCc------cccHHHHHHHHH----cCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCcccEEE
Confidence 999999777751 111234333333 2555555555 455 56 444555555554 67865 45
Q ss_pred CCCcceeecc
Q psy10250 365 NKDLFRIGAS 374 (387)
Q Consensus 365 ~~~~~RIGtS 374 (387)
+|+..=+|.+
T Consensus 169 DPg~gfigk~ 178 (271)
T 2yci_X 169 DPLILPVNVA 178 (271)
T ss_dssp ECCCCCTTTS
T ss_pred ecCCCccccC
Confidence 6766555554
No 420
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=59.94 E-value=71 Score=29.71 Aligned_cols=88 Identities=9% Similarity=-0.019 Sum_probs=56.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCC----hhHHHHHHHHHHHHhCC-CcceEEEEeeccCC---
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQ----WPELFSEVKQMKEKCGE-KIHMKTILAVGELK--- 280 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~----~~~v~~Ei~~v~~~~~~-~~~lKvIlEt~~L~--- 280 (387)
+++|+|+.... ..-++..++.||.-|=+= +-.. ..|. .+...+-|++++++... +.+++|+==|..+-
T Consensus 85 aD~~~Gyg~~~--~~~~~~l~~aGa~gv~iE-d~~~-~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~ 160 (255)
T 2qiw_A 85 VDVESGYGLSP--ADLIAQILEAGAVGINVE-DVVH-SEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGA 160 (255)
T ss_dssp EECTTCTTCCH--HHHHHHHHHTTCCEEEEC-SEEG-GGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCT
T ss_pred eccCCCcCcHH--HHHHHHHHHcCCcEEEEC-CCCC-CCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccC
Confidence 49999986555 777888889999876321 0001 1122 25667778888877542 25788887776520
Q ss_pred -----ChHHHHHHHHHHHHcCCCEE
Q psy10250 281 -----TSENIYCASMTAMFAGSDFI 300 (387)
Q Consensus 281 -----t~e~i~~a~~ia~~aGaDfV 300 (387)
..++..+=++...+||||-|
T Consensus 161 ~~~~~~~~~ai~ra~a~~eAGAd~i 185 (255)
T 2qiw_A 161 DVFEDPMVEAIKRIKLMEQAGARSV 185 (255)
T ss_dssp TTSSSHHHHHHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHHHHHHcCCcEE
Confidence 12344444578889999977
No 421
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=59.75 E-value=46 Score=33.72 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEE-eccCCCCHHHHHHHHHHHHHcCCCEE
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTIL-AVGELKTSENIYYASMTAMFAGSDFI 91 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIl-Et~~L~~~e~i~~a~~~a~~ag~dfv 91 (387)
...++.+++.|+|-|.+ |.+ .|+.+...+-++.+++.+++ +.||. +. .+.++ ++.+.++|+|+|
T Consensus 257 ~~~a~~~~~aG~d~v~i--~~~---~G~~~~~~~~i~~i~~~~~~---~pvi~~~v---~t~~~----a~~l~~aGad~I 321 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVL--DSS---QGNSVYQIAMVHYIKQKYPH---LQVIGGNV---VTAAQ----AKNLIDAGVDGL 321 (514)
T ss_dssp HHHHHHHHHTTCSEEEE--CCS---CCCSHHHHHHHHHHHHHCTT---CEEEEEEE---CSHHH----HHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEe--ecc---CCcchhHHHHHHHHHHhCCC---CceEeccc---chHHH----HHHHHHcCCCEE
Confidence 45678889999997655 332 25556667778888887732 34454 33 25444 456678999999
Q ss_pred ecCCC
Q psy10250 92 KTSTG 96 (387)
Q Consensus 92 KTSTG 96 (387)
+-+.|
T Consensus 322 ~vg~~ 326 (514)
T 1jcn_A 322 RVGMG 326 (514)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 99554
No 422
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=59.49 E-value=46 Score=31.27 Aligned_cols=195 Identities=11% Similarity=0.018 Sum_probs=109.4
Q ss_pred CHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy10250 8 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAG 87 (387)
Q Consensus 8 ~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag 87 (387)
..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .++||.=+|-.++.+ -.+.++.|.++|
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~-ai~la~~A~~~G 95 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNATHE-AVHLTAHAKEVG 95 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHH-HHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHH-HHHHHHHHHhcC
Confidence 34444566888899998884333333333333455555556666666655 378999999875544 556777889999
Q ss_pred CCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHhcCCC
Q psy10250 88 SDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKAIQPL 159 (387)
Q Consensus 88 ~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A~~~~ 159 (387)
+|.+=-.+=|.... ++ +.-..+++.++...|.-+ -.-+.+.+.+.++.++ .
T Consensus 96 adavlv~~P~y~~~----------------s~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~--- 154 (294)
T 2ehh_A 96 ADGALVVVPYYNKP----------------TQ-RGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASE-C--- 154 (294)
T ss_dssp CSEEEEECCCSSCC----------------CH-HHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHH-C---
T ss_pred CCEEEECCCCCCCC----------------CH-HHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhh-C---
Confidence 99987655543221 11 222223334443333221 1235688888888643 2
Q ss_pred cHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeee-
Q psy10250 160 SEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDI- 238 (387)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~- 238 (387)
-++.+|=-...-+....+++... +.++.| . .| ... -.-.++..|++-.=-
T Consensus 155 --------------pnivgiKds~gd~~~~~~~~~~~--~~~f~v--~-~G----~d~------~~~~~l~~G~~G~is~ 205 (294)
T 2ehh_A 155 --------------ENIVASKESTPNMDRISEIVKRL--GESFSV--L-SG----DDS------LTLPMMALGAKGVISV 205 (294)
T ss_dssp --------------TTEEEEEECCSCHHHHHHHHHHH--CTTSEE--E-ES----SGG------GHHHHHHTTCCEEEES
T ss_pred --------------CCEEEEEeCCCCHHHHHHHHHhc--CCCeEE--E-EC----cHH------HHHHHHHCCCCEEEeC
Confidence 25666655555566665555432 123433 3 13 222 133456788875333
Q ss_pred ecCc---------hhhhcCChhHHHH
Q psy10250 239 VIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 239 Vin~---------~~lk~g~~~~v~~ 255 (387)
.-|+ .++++||++..++
T Consensus 206 ~an~~P~~~~~l~~a~~~Gd~~~A~~ 231 (294)
T 2ehh_A 206 ANNVMPREVKELIRAALEGDFRRARE 231 (294)
T ss_dssp GGGTCHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHCCCHHHHHH
Confidence 3442 5567788776554
No 423
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=59.47 E-value=1.1e+02 Score=28.45 Aligned_cols=95 Identities=16% Similarity=0.048 Sum_probs=69.1
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHH-CCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIY 286 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~-~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~ 286 (387)
.=| +.|.-..+.=..-+++.++ .|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.++ ++..
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai 89 (293)
T 1f6k_A 13 VSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNL-KEAV 89 (293)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCH-HHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCH-HHHH
Confidence 455 4577778887888999999 999986555445554444556656666677777764 5799999999966 4456
Q ss_pred HHHHHHHHcCCCEEEcCCCC
Q psy10250 287 CASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTSTGf 306 (387)
+.++.|.++|+|.+=-.+=|
T Consensus 90 ~la~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHhcCCCEEEECCCC
Confidence 78889999999987665544
No 424
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=59.06 E-value=18 Score=35.52 Aligned_cols=68 Identities=12% Similarity=-0.013 Sum_probs=48.2
Q ss_pred HcCCCeeeeecchh--HHh-----cCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcC-CCEEe
Q psy10250 21 KQKVDEVDIVIQRS--LVL-----NNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAG-SDFIK 92 (387)
Q Consensus 21 ~~GA~EiD~Vin~~--~lk-----~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag-~dfvK 92 (387)
+.|+|.||+ |++ ..+ ..+.+.+.+-+++|+++....+.+|+-. .+ +.+++.++++++.++| +|+|-
T Consensus 153 ~~g~d~iel--NisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p---~~-d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 153 TEKGVILEL--NLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP---YF-DFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp HHHCCEEEE--ECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC---CC-SHHHHHHHHHHHHTCTTEEEEE
T ss_pred hcCCCEEEE--eCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC---CC-CHHHHHHHHHHHHhCCCccEEE
Confidence 468999775 444 222 2356778788888887765456778754 35 6788889999999998 99997
Q ss_pred cC
Q psy10250 93 TS 94 (387)
Q Consensus 93 TS 94 (387)
.+
T Consensus 227 ~~ 228 (354)
T 4ef8_A 227 CI 228 (354)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 425
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=58.93 E-value=1.1e+02 Score=28.28 Aligned_cols=218 Identities=12% Similarity=0.070 Sum_probs=121.1
Q ss_pred EEEEEeccCCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCC
Q psy10250 61 MKTILAVGELKTSENIYYASMTAMFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLS 140 (387)
Q Consensus 61 ~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~ 140 (387)
+-+|.|-|-.-+.+...+.++.+.++|+|+||-.| |-++ |.+ -.| .-+- +....+++++.+-.....+.
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~-fkpr--ts~--~~~--~g~~----~egl~~l~~~~~~~Gl~~~t 92 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGA-FKPR--TSP--YSF--QGYG----EKALRWMREAADEYGLVTVT 92 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS-SCCC--SST--TSC--CCCT----HHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEe-cccC--CCc--ccc--cCcc----HHHHHHHHHHHHHcCCcEEE
Confidence 67889998887778888888899999999999766 4332 211 233 1111 33334555555555555554
Q ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCc---cHHHHHHHhhhcCCCCCceEEEEecCCCCCCC-
Q psy10250 141 GDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPA---RVVDVIKVLDRENARDDVKVASVAAGFPSGQY- 216 (387)
Q Consensus 141 ~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~---~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~- 216 (387)
.-..+.++.-+.+- . ..+-|++. ..++.++.-+ ++.+ |+|=.|..
T Consensus 93 e~~d~~~~~~l~~~-v--------------------d~~kIga~~~~n~~ll~~~a~-----~~kP-----V~lk~G~~~ 141 (262)
T 1zco_A 93 EVMDTRHVELVAKY-S--------------------DILQIGARNSQNFELLKEVGK-----VENP-----VLLKRGMGN 141 (262)
T ss_dssp ECCCGGGHHHHHHH-C--------------------SEEEECGGGTTCHHHHHHHTT-----SSSC-----EEEECCTTC
T ss_pred eeCCHHhHHHHHhh-C--------------------CEEEECcccccCHHHHHHHHh-----cCCc-----EEEecCCCC
Confidence 44444444444332 3 23444443 2233333211 2332 25557887
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcC-ChhHH--H-HHHHHHHHHhCCCcceEEEEeeccCCC-hHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPEL--F-SEVKQMKEKCGEKIHMKTILAVGELKT-SENIYCASMT 291 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g-~~~~v--~-~Ei~~v~~~~~~~~~lKvIlEt~~L~t-~e~i~~a~~i 291 (387)
+.+.-..-++.....|...+=+.- +|- .+. +|... - +-+..+++..+ +.||.-.+-=.. .+.+..++..
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~-RG~-~~~~~y~~~~v~L~ai~~lk~~~~----~pVi~d~sH~~g~~~~v~~~~~a 215 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCE-RGI-RTFETATRFTLDISAVPVVKELSH----LPIIVDPSHPAGRRSLVIPLAKA 215 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEE-CCB-CCSCCSSSSBCCTTHHHHHHHHBS----SCEEECSSTTTCSGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEE-CCC-CCCCCcChhhcCHHHHHHHHhhhC----CCEEEEcCCCCCccchHHHHHHH
Confidence 777777777777778887664433 220 010 22211 1 33445555443 347666554333 3434455777
Q ss_pred HHHcCCC--EEEcCC------CCCCCCCChhhhHhHHHHHHHH
Q psy10250 292 AMFAGSD--FIKTST------GKEKTNATIPAGIIMCSAIKHF 326 (387)
Q Consensus 292 a~~aGaD--fVKTST------Gf~~~gat~~~~~~m~~~v~~~ 326 (387)
|...||| +|-+-- .=++...+|+..+.|++.+|.+
T Consensus 216 Ava~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 216 AYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp HHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 8899999 998651 1123446777777787777654
No 426
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=58.93 E-value=15 Score=35.36 Aligned_cols=133 Identities=10% Similarity=0.015 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEE-eeccCCChHHHHHHHHHHHHcCC
Q psy10250 219 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-AVGELKTSENIYCASMTAMFAGS 297 (387)
Q Consensus 219 e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIl-Et~~L~t~e~i~~a~~ia~~aGa 297 (387)
+.-+..+++.++.|||=||+-.--.. -....-...+|++.|..+... ..+-+.| .|+ ++|.-.+..+.|+++|+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~Str-P~~~~vs~eee~~vV~~v~~~-~~vplsI~DT~---~~~~~~~V~eaal~aga 148 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAH-PDGQNRSGAELAEVCKAVADA-IDVPLMIIGCG---VEEKDAEIFPVIGEALS 148 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGC-TTTTCCCHHHHHHHHHHHHHH-CSSCEEEECCS---CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCC-CCCCCCCHHHHHHHHHHHHHh-CCceEEEECCC---CCCCCHHHHHHHHHhCC
Confidence 45667788999999999999764111 112233445555544433321 1234566 664 34455567788999999
Q ss_pred C---EEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC----ccCCCcce
Q psy10250 298 D---FIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD----WLNKDLFR 370 (387)
Q Consensus 298 D---fVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~----w~~~~~~R 370 (387)
+ .|..-+|. ..+ .|+..++. .+-.+-+... ++.+.+.+.+..+. .+|.. +++|+..=
T Consensus 149 ~~k~iINdvs~~-----~~~---~~~~~aa~----~g~~vv~m~~---~dv~~l~~~~~~a~-~~Gi~~e~IilDPg~g~ 212 (310)
T 2h9a_B 149 GRNCLLSSATKD-----NYK---PIVATCMV----HGHSVVASAP---LDINLSKQLNIMIM-EMNLAPNRIIMDPLIGA 212 (310)
T ss_dssp TSCCEEEEECTT-----THH---HHHHHHHH----HTCEEEEECS---SCHHHHHHHHHHHH-TTTCCGGGEEEECCCCC
T ss_pred CCCCEEEECCCC-----ccH---HHHHHHHH----hCCCEEEECh---hHHHHHHHHHHHHH-HCCCChhhEEEeCCCcc
Confidence 8 99887874 122 23333332 2444444432 35566666666555 57763 34666533
Q ss_pred ee
Q psy10250 371 IG 372 (387)
Q Consensus 371 IG 372 (387)
+|
T Consensus 213 ~g 214 (310)
T 2h9a_B 213 LG 214 (310)
T ss_dssp TT
T ss_pred cc
Confidence 34
No 427
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=58.28 E-value=1.1e+02 Score=27.71 Aligned_cols=184 Identities=13% Similarity=0.124 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCeeeee-cchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCE-
Q psy10250 13 LHEIELLAKQKVDEVDIV-IQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDF- 90 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~V-in~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~df- 90 (387)
..|+...++.-.+.+|++ ++.+.+ +.+=.+-++.+++. ++ .++++..-+-+-+.....+++.+.++|+|+
T Consensus 24 ~~~a~~~v~~~~~~v~~~Kvg~~lf----~~~G~~~v~~l~~~-~g---~~v~lD~Kl~DipnTv~~~~~~~~~~gad~v 95 (228)
T 3m47_A 24 RDDALRVTGEVREYIDTVKIGYPLV----LSEGMDIIAEFRKR-FG---CRIIADFKVADIPETNEKICRATFKAGADAI 95 (228)
T ss_dssp HHHHHHHHHTTTTTCSEEEEEHHHH----HHHCTHHHHHHHHH-HC---CEEEEEEEECSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCcccEEEEcHHHH----HhcCHHHHHHHHhc-CC---CeEEEEEeecccHhHHHHHHHHHHhCCCCEE
Q ss_pred -EecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccCCCCCCH-------HHHHHHHHHhcCCCcHH
Q psy10250 91 -IKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTLSGDDTE-------AVVETLTLKAIQPLSEE 162 (387)
Q Consensus 91 -vKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L~~~~T~-------~~i~~l~~~A~~~~~~~ 162 (387)
|....| ...+ +.....+++.-+ ..++|.+..++ +.+.++.+.|.
T Consensus 96 tvh~~~G----------~~~l----------~~~~~~~~~~g~--~v~vLt~~s~~~~~~~~~~~~~~~a~~a~------ 147 (228)
T 3m47_A 96 IVHGFPG----------ADSV----------RACLNVAEEMGR--EVFLLTEMSHPGAEMFIQGAADEIARMGV------ 147 (228)
T ss_dssp EEESTTC----------HHHH----------HHHHHHHHHHTC--EEEEECCCCSGGGGTTHHHHHHHHHHHHH------
T ss_pred EEeccCC----------HHHH----------HHHHHHHHhcCC--CeEEEEeCCCccHHHHHHHHHHHHHHHHH------
Q ss_pred HHHHHhhhccCCCeEEEEEC---CccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeee
Q psy10250 163 LKEKVLHQQANVHTAAVCVY---PARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIV 239 (387)
Q Consensus 163 ~~~~~~~~~~~~~~~aVcV~---P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~V 239 (387)
+.|+.++.++ |..++..++... .+..+.+--|| |.|.+ . ++++.||| -+|
T Consensus 148 ----------~~G~~GvV~~at~~~e~~~ir~~~~-----~~~~iv~PGI~-~~g~~--------p-~~~~aGad--~iV 200 (228)
T 3m47_A 148 ----------DLGVKNYVGPSTRPERLSRLREIIG-----QDSFLISPGVG-AQGGD--------P-GETLRFAD--AII 200 (228)
T ss_dssp ----------HTTCCEEECCSSCHHHHHHHHHHHC-----SSSEEEECC-------------------CGGGTCS--EEE
T ss_pred ----------HhCCcEEEECCCChHHHHHHHHhcC-----CCCEEEecCcC-cCCCC--------H-hHHHcCCC--EEE
Q ss_pred cCchhhhcCChhHHHHHHHH
Q psy10250 240 IQRSLVLNNQWPELFSEVKQ 259 (387)
Q Consensus 240 in~~~lk~g~~~~v~~Ei~~ 259 (387)
+-.+-+++.|.....++++.
T Consensus 201 vGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 201 VGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp ECHHHHTSSCHHHHHHHHHH
T ss_pred ECHHHhCCCCHHHHHHHHHH
No 428
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=58.16 E-value=47 Score=31.35 Aligned_cols=198 Identities=15% Similarity=0.089 Sum_probs=112.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|..-+=.+++-.+=++.+++.+.+ ..+.||.=+|-.++.+ ..+.++.|.
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-~rvpviaGvg~~~t~~-ai~la~~a~ 100 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG-TKVKVLAGAGSNATHE-AVGLAKFAK 100 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEECCCSSHHH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCCeEEEeCCCCCHHH-HHHHHHHHH
Confidence 33334455566889999999986333333433333455555556666666654 1378999999875544 556778889
Q ss_pred HcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhcccccccC--------CCCCCHHHHHHHHHHhc
Q psy10250 85 FAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTTL--------SGDDTEAVVETLTLKAI 156 (387)
Q Consensus 85 ~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~L--------~~~~T~~~i~~l~~~A~ 156 (387)
++|+|.+=-.+-|.... + + +.-..++++++...|.-++ .-+.+.+.+.++.+..-
T Consensus 101 ~~Gadavlv~~P~y~~~-s---------------~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~p 163 (301)
T 3m5v_A 101 EHGADGILSVAPYYNKP-T---------------Q-QGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE 163 (301)
T ss_dssp HTTCSEEEEECCCSSCC-C---------------H-HHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCT
T ss_pred HcCCCEEEEcCCCCCCC-C---------------H-HHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCC
Confidence 99999987766654321 1 1 2222234444444343221 44678888888874311
Q ss_pred CCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCee
Q psy10250 157 QPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEV 236 (387)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEI 236 (387)
++.+|=-...-+....+++... .++.| . .|.... +-.++..|++-.
T Consensus 164 ------------------nivgiKdssgd~~~~~~~~~~~---~~f~v--~-----~G~d~~------~~~~l~~G~~G~ 209 (301)
T 3m5v_A 164 ------------------NIYGVKEASGNIDKCVDLLAHE---PRMML--I-----SGEDAI------NYPILSNGGKGV 209 (301)
T ss_dssp ------------------TEEEEEECSSCHHHHHHHHHHC---TTSEE--E-----ECCGGG------HHHHHHTTCCEE
T ss_pred ------------------CEEEEEeCCCCHHHHHHHHHhC---CCeEE--E-----EccHHH------HHHHHHcCCCEE
Confidence 4555655555556666555431 23333 3 233222 234567888874
Q ss_pred e-eecCc---------hhhhcCChhHHHH
Q psy10250 237 D-IVIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 237 D-~Vin~---------~~lk~g~~~~v~~ 255 (387)
= ..-|+ .++++||++..++
T Consensus 210 is~~~n~~P~~~~~l~~a~~~Gd~~~A~~ 238 (301)
T 3m5v_A 210 ISVTSNLLPDMISALTHFALDENYKEAKK 238 (301)
T ss_dssp EESGGGTCHHHHHHHHHHHHTTCHHHHHH
T ss_pred EehHHHhhHHHHHHHHHHHHCCCHHHHHH
Confidence 3 22343 4556777766554
No 429
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=58.14 E-value=40 Score=31.44 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=60.4
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE---
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI--- 300 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV--- 300 (387)
.+....+.|++-|-|- +++-++ -++|++++.++|... -+ .|=-|+=+ +.+.+....++|.++|+..|
T Consensus 150 Aiaml~dmG~~SvKff-Pm~Gl~------~l~E~~avAka~a~~-g~-~lEPTGGI-dl~N~~~I~~i~l~aGv~~viPH 219 (249)
T 3m0z_A 150 AIALLKDMGGSSIKYF-PMGGLK------HRAEFEAVAKACAAH-DF-WLEPTGGI-DLENYSEILKIALDAGVSKIIPH 219 (249)
T ss_dssp HHHHHHHTTCCEEEEC-CCTTTT------THHHHHHHHHHHHHT-TC-EEEEBSSC-CTTTHHHHHHHHHHHTCSCBCCB
T ss_pred HHHHHHHcCCCeeeEe-ecCCcc------cHHHHHHHHHHHHHc-Cc-eECCCCCc-cHhhHHHHHHHHHHcCCCeeccc
Confidence 3455667899998875 555444 378999999999532 23 55557777 56888888999999999765
Q ss_pred ------EcCCCCCCCCCChhhhHhHHHHHHH
Q psy10250 301 ------KTSTGKEKTNATIPAGIIMCSAIKH 325 (387)
Q Consensus 301 ------KTSTGf~~~gat~~~~~~m~~~v~~ 325 (387)
-..|| .+.+++++.+++.++.
T Consensus 220 IYssIIDk~TG----~TrpedV~~ll~~~K~ 246 (249)
T 3m0z_A 220 IYSSIIDKASG----NTRPADVRQLLEMTKQ 246 (249)
T ss_dssp CCGGGBCTTTC----CBCHHHHHHHHHHHHH
T ss_pred ccceeccCCCC----CCCHHHHHHHHHHHHH
Confidence 22344 4667777666555443
No 430
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=58.04 E-value=54 Score=31.95 Aligned_cols=83 Identities=18% Similarity=0.124 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCC------CCC---C-CCC-ChhhhHhHHHHHHHHHHHcCCC--ceEeEeccCCCHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTST------GKE---K-TNA-TIPAGIIMCSAIKHFHKLSGKK--IGLKPAGGISTFED 347 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTST------Gf~---~-~ga-t~~~~~~m~~~v~~~~~~~~~~--~gIKasGGIrt~~~ 347 (387)
+.++..+.++.+.++|-+.||--- |+. + +|. +.......++-|+.+++.+|.. +.|.+-||- |.++
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~-~~~~ 230 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFT-DTTS 230 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHH
Confidence 567777788888889999998643 431 0 111 1123344456677777778764 667887775 7899
Q ss_pred HHHHHHHHHHhcCCCccC
Q psy10250 348 SVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 348 a~~~i~l~~~~~Ga~w~~ 365 (387)
|++++...+ .+|.+|+.
T Consensus 231 a~~~~~~l~-~~~i~~iE 247 (407)
T 2o56_A 231 AIQFGRMIE-ELGIFYYE 247 (407)
T ss_dssp HHHHHHHHG-GGCCSCEE
T ss_pred HHHHHHHHH-hcCCCEEe
Confidence 999987644 57999983
No 431
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=57.97 E-value=31 Score=33.64 Aligned_cols=82 Identities=15% Similarity=0.179 Sum_probs=55.5
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCC----------CCCCCCChhhhHhHHHHHHHHHHHcCCC--ceEeEeccCCCHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTG----------KEKTNATIPAGIIMCSAIKHFHKLSGKK--IGLKPAGGISTFEDS 348 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTG----------f~~~gat~~~~~~m~~~v~~~~~~~~~~--~gIKasGGIrt~~~a 348 (387)
+.++..++++.+.+.|-+.||--.| +..+|-.........+-|+.+++.+|.. +.|.+-||- |.++|
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~-~~~~a 215 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGL-TTDET 215 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHH
Confidence 6677777788888889999987554 1111222233344456677777778764 667877775 68999
Q ss_pred HHHHHHHHHhcCCCcc
Q psy10250 349 VRWIYLVLIMLGPDWL 364 (387)
Q Consensus 349 ~~~i~l~~~~~Ga~w~ 364 (387)
++++...+ .+|.+|+
T Consensus 216 ~~~~~~l~-~~~i~~i 230 (392)
T 2poz_A 216 IRFCRKIG-ELDICFV 230 (392)
T ss_dssp HHHHHHHG-GGCEEEE
T ss_pred HHHHHHHH-hcCCCEE
Confidence 99987643 4688887
No 432
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=57.96 E-value=1.2e+02 Score=28.33 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=89.7
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.++ ++-.+
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~ 93 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNT-VEAIA 93 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCH-HHHHH
Confidence 445 4577778888888999999999997555445554444555555556666676654 4889999998866 45667
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHH--------------------------HHHHHHHHcCCCceEeEecc
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCS--------------------------AIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~--------------------------~v~~~~~~~~~~~gIKasGG 341 (387)
.++.|.++|+|.+=-.+=|.. ..|.+....-++ .+..+. ..++=+|||-|.|
T Consensus 94 la~~a~~~Gadavlv~~P~y~-~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-~~pnivgiKdssg 171 (297)
T 3flu_A 94 LSQAAEKAGADYTLSVVPYYN-KPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA-EIPNIVGVKEASG 171 (297)
T ss_dssp HHHHHHHTTCSEEEEECCCSS-CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT-TSTTEEEEEECSC
T ss_pred HHHHHHHcCCCEEEECCCCCC-CCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH-cCCCEEEEEeCCC
Confidence 789999999998866554422 223332222222 222232 2456689998865
Q ss_pred CCCHHHHHHHHH
Q psy10250 342 ISTFEDSVRWIY 353 (387)
Q Consensus 342 Irt~~~a~~~i~ 353 (387)
+..+..+++.
T Consensus 172 --d~~~~~~~~~ 181 (297)
T 3flu_A 172 --NIGSNIELIN 181 (297)
T ss_dssp --CHHHHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 5666666664
No 433
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=57.62 E-value=1.3e+02 Score=28.48 Aligned_cols=144 Identities=13% Similarity=0.059 Sum_probs=91.8
Q ss_pred CceEEEEecCC-C-CCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc
Q psy10250 201 DVKVASVAAGF-P-SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 278 (387)
Q Consensus 201 ~v~v~tVvigF-P-~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~ 278 (387)
++-++.+ .=| + .|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+.+ .+.||.=++.
T Consensus 14 Gv~~a~v-TPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g--rvpViaGvg~ 90 (316)
T 3e96_A 14 TISGIPI-TPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG--RALVVAGIGY 90 (316)
T ss_dssp SEEECCC-CCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECS
T ss_pred ceEEeee-CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEEeCc
Confidence 4444444 566 4 577778888888999999999985444344444443455555556666776654 5789999995
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHH----------------------HHHHHHHcCCCceE
Q psy10250 279 LKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSA----------------------IKHFHKLSGKKIGL 336 (387)
Q Consensus 279 L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~----------------------v~~~~~~~~~~~gI 336 (387)
++ ++..+.++.|.++|+|.+=-.+=|.. ..|.+.+..-+++ +..+. ..++=+||
T Consensus 91 -~t-~~ai~la~~A~~~Gadavlv~~P~y~-~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La-~~pnIvgi 166 (316)
T 3e96_A 91 -AT-STAIELGNAAKAAGADAVMIHMPIHP-YVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA-PLQNLVGV 166 (316)
T ss_dssp -SH-HHHHHHHHHHHHHTCSEEEECCCCCS-CCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT-TCTTEEEE
T ss_pred -CH-HHHHHHHHHHHhcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH-cCCCEEEE
Confidence 66 45667789999999999887665532 2243332222222 22232 24566899
Q ss_pred eEeccCCCHHHHHHHHH
Q psy10250 337 KPAGGISTFEDSVRWIY 353 (387)
Q Consensus 337 KasGGIrt~~~a~~~i~ 353 (387)
|-|.| +..+..+++.
T Consensus 167 Kdssg--d~~~~~~~~~ 181 (316)
T 3e96_A 167 KYAIN--DLPRFAKVVR 181 (316)
T ss_dssp EECCC--CHHHHHHHHT
T ss_pred EeCCC--CHHHHHHHHH
Confidence 99876 6666666663
No 434
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=57.62 E-value=18 Score=32.28 Aligned_cols=117 Identities=6% Similarity=-0.026 Sum_probs=66.1
Q ss_pred CCCeEEEEECC-----ccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCC-H-------HHHHHHHHHHHHCCCCeeeee
Q psy10250 173 NVHTAAVCVYP-----ARVVDVIKVLDRENARDDVKVASVAAGFPSGQYL-L-------ETRLHEIELLAKQKVDEVDIV 239 (387)
Q Consensus 173 ~~~~~aVcV~P-----~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~-~-------e~K~~Ea~~Ai~~GAdEID~V 239 (387)
++||.+|-+.+ ..+...++.++. .++++.++. .+|.-.++ . +.=...++.|.+.|++-|=+.
T Consensus 29 ~~G~~~vEl~~~~~~~~~~~~~~~~l~~----~gl~~~~~~-~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~ 103 (275)
T 3qc0_A 29 KHGITAIAPWRDQVAAIGLGEAGRIVRA----NGLKLTGLC-RGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLV 103 (275)
T ss_dssp HTTCCEEECBHHHHHHHCHHHHHHHHHH----HTCEESCEE-EEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEE
T ss_pred HcCCCEEEeccccccccCHHHHHHHHHH----cCCceEEee-cCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 56888887755 346667777775 477776652 33322222 1 112234667778899875443
Q ss_pred cCchhhhcC------ChhHHHHHHHHHHHHhCCCcceEEEEeec---------cCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 240 IQRSLVLNN------QWPELFSEVKQMKEKCGEKIHMKTILAVG---------ELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 240 in~~~lk~g------~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~---------~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
.|....+ .|+.+.+-++++.+.+.. .-+++-+|+- .+.+.++.. ++..+.+. .++
T Consensus 104 --~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~lE~~~~~~~~~~~~~~~~~~~~---~l~~~~~~-~vg 173 (275)
T 3qc0_A 104 --AGGLPGGSKNIDAARRMVVEGIAAVLPHARA-AGVPLAIEPLHPMYAADRACVNTLGQAL---DICETLGP-GVG 173 (275)
T ss_dssp --CBCCCTTCCCHHHHHHHHHHHHHHHHHHHHH-HTCCEEECCCCGGGTTTTBSCCCHHHHH---HHHHHHCT-TEE
T ss_pred --eCCCCCCCcCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEeECCCcccCCccccCCHHHHH---HHHHHhCc-ccE
Confidence 3333222 344555666666666643 3489999972 455555544 44445454 443
No 435
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.54 E-value=37 Score=32.13 Aligned_cols=138 Identities=9% Similarity=-0.071 Sum_probs=87.1
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .+.||.=++-.++ ++..+
T Consensus 14 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~ 90 (300)
T 3eb2_A 14 SPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR--RVPVVAGVASTSV-ADAVA 90 (300)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCBEEEEEESSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCH-HHHHH
Confidence 455 5677778888888999999999986333334444333455555556666666654 4779999998866 45567
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHH--------------------------HHHHHHHHHcCCCceEeEecc
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMC--------------------------SAIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~--------------------------~~v~~~~~~~~~~~gIKasGG 341 (387)
.++.|.++|+|.+=-.+=|... .|.+....-+ +.++.+. ..++=+|||-|.|
T Consensus 91 la~~a~~~Gadavlv~~P~y~~-~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La-~~pnIvgiKdssg 168 (300)
T 3eb2_A 91 QAKLYEKLGADGILAILEAYFP-LKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA-EHPRIRYIKDAST 168 (300)
T ss_dssp HHHHHHHHTCSEEEEEECCSSC-CCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH-TSTTEEEEEECSS
T ss_pred HHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH-cCCCEEEEEcCCC
Confidence 7899999999987655443211 2322221111 2333343 3466789999876
Q ss_pred CCCHHHHHHHHH
Q psy10250 342 ISTFEDSVRWIY 353 (387)
Q Consensus 342 Irt~~~a~~~i~ 353 (387)
+..+..+++.
T Consensus 169 --d~~~~~~~~~ 178 (300)
T 3eb2_A 169 --NTGRLLSIIN 178 (300)
T ss_dssp --BHHHHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 5666666664
No 436
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=57.35 E-value=1.2e+02 Score=28.18 Aligned_cols=138 Identities=14% Similarity=0.032 Sum_probs=87.9
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=...+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+++ .+.||.=++-.++ ++..+
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 87 (291)
T 3tak_A 11 TPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK--RIPIIAGTGANST-REAIE 87 (291)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCH-HHHHH
Confidence 445 4577777888888999999999997333334444333455555556666666654 4889999998866 45667
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHH--------------------------HHHHHHHHcCCCceEeEecc
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCS--------------------------AIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~--------------------------~v~~~~~~~~~~~gIKasGG 341 (387)
.++.|.++|+|.+=-.+=|.. ..|.+....-++ .++.+. ..++=+|||-|.|
T Consensus 88 la~~a~~~Gadavlv~~P~y~-~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La-~~pnivgiK~ssg 165 (291)
T 3tak_A 88 LTKAAKDLGADAALLVTPYYN-KPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA-EIPNIVGIKDATG 165 (291)
T ss_dssp HHHHHHHHTCSEEEEECCCSS-CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT-TSTTEEEEEECSC
T ss_pred HHHHHHhcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH-cCCCEEEEEeCCC
Confidence 789999999998876654422 223332222222 222233 2456689998865
Q ss_pred CCCHHHHHHHHH
Q psy10250 342 ISTFEDSVRWIY 353 (387)
Q Consensus 342 Irt~~~a~~~i~ 353 (387)
+..+..+++.
T Consensus 166 --d~~~~~~~~~ 175 (291)
T 3tak_A 166 --DVPRGKALID 175 (291)
T ss_dssp --CHHHHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 5666666654
No 437
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=57.33 E-value=1.3e+02 Score=28.49 Aligned_cols=92 Identities=9% Similarity=0.015 Sum_probs=57.7
Q ss_pred cCCCCCCC-CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCC--------hhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 209 AGFPSGQY-LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQ--------WPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 209 igFP~G~~-~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~--------~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++.|+|+. ..+--..-++..++.||.-|.+==..+-=+.|+ .+...+-|++.+++..+ ..++|+==|..+
T Consensus 83 aD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~-~~~~i~aRtda~ 161 (295)
T 1xg4_A 83 VDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTD-PDFVIMARTDAL 161 (295)
T ss_dssp EECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSS-TTSEEEEEECCH
T ss_pred ecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccC-CCcEEEEecHHh
Confidence 49999987 666666677888889999886532211001111 23455567777776543 457788777644
Q ss_pred C--ChHHHHHHHHHHHHcCCCEEE
Q psy10250 280 K--TSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 280 ~--t~e~i~~a~~ia~~aGaDfVK 301 (387)
. ..++..+=++...++|||-|=
T Consensus 162 ~~~gl~~ai~ra~ay~eAGAd~i~ 185 (295)
T 1xg4_A 162 AVEGLDAAIERAQAYVEAGAEMLF 185 (295)
T ss_dssp HHHCHHHHHHHHHHHHHTTCSEEE
T ss_pred hhcCHHHHHHHHHHHHHcCCCEEE
Confidence 1 113444445888999999873
No 438
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=57.31 E-value=1.1e+02 Score=28.56 Aligned_cols=95 Identities=12% Similarity=-0.051 Sum_probs=67.8
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ .++||.=++-.++. +-.+
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~-~ai~ 87 (292)
T 2ojp_A 11 TPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG--RIPVIAGTGANATA-EAIS 87 (292)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHH-HHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHH-HHHH
Confidence 445 4577778888888999999999996544445544444455555566666776654 47899999998664 4557
Q ss_pred HHHHHHHcCCCEEEcCCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf 306 (387)
.++.|.++|+|.+=-.+=|
T Consensus 88 la~~a~~~Gadavlv~~P~ 106 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTPY 106 (292)
T ss_dssp HHHHTTTSSCSEEEEECCC
T ss_pred HHHHHHhcCCCEEEECCCC
Confidence 7888999999987655543
No 439
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=57.18 E-value=24 Score=34.60 Aligned_cols=79 Identities=14% Similarity=0.049 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCh-hhhHhHHHHHHHHHHHcCC--CceEeEeccCC-CHHHHHHHHHHH
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGKEKTNATI-PAGIIMCSAIKHFHKLSGK--KIGLKPAGGIS-TFEDSVRWIYLV 355 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~-~~~~~m~~~v~~~~~~~~~--~~gIKasGGIr-t~~~a~~~i~l~ 355 (387)
.+.++..++++.+.+.|.+.||--- .+.|.++ +. .++-|+.+++.+|. .+.|++-||-+ |.++|+.++...
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~--spvG~~~~~~---~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l 218 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGW--GPIGRGTVAA---DADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTL 218 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEES--TTTTSSCHHH---HHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcC--CCCCCCHHHH---HHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHH
Confidence 4677788888888899999999640 1122244 32 23456666777765 57788889987 999999998775
Q ss_pred HHhcCCCcc
Q psy10250 356 LIMLGPDWL 364 (387)
Q Consensus 356 ~~~~Ga~w~ 364 (387)
+ .+|.+|+
T Consensus 219 ~-~~~i~~i 226 (401)
T 2hzg_A 219 D-AAGVLWL 226 (401)
T ss_dssp H-HTTCSEE
T ss_pred H-hcCCCEE
Confidence 4 4799888
No 440
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=57.12 E-value=35 Score=31.56 Aligned_cols=70 Identities=11% Similarity=-0.043 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCC-----------CChhhhHhHHHHHHHHHH---HcCCCceEeEec--cCCCHHH
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEKTN-----------ATIPAGIIMCSAIKHFHK---LSGKKIGLKPAG--GISTFED 347 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~~g-----------at~~~~~~m~~~v~~~~~---~~~~~~gIKasG--GIrt~~~ 347 (387)
.+.+++++|.+.|+.+|.+.+|....+ .+.+....+.+.++.+.+ ..|-++.+-.-. .+.+.++
T Consensus 112 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~ 191 (340)
T 2zds_A 112 EIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWT 191 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTTSSCCSHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCCcccCCHHH
Confidence 456678899999999999988864211 012222334444444333 335566666644 3689999
Q ss_pred HHHHHH
Q psy10250 348 SVRWIY 353 (387)
Q Consensus 348 a~~~i~ 353 (387)
+..+++
T Consensus 192 ~~~ll~ 197 (340)
T 2zds_A 192 THRALE 197 (340)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 441
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=56.97 E-value=66 Score=31.15 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=69.5
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-----------cCCC-h--------HH
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-----------ELKT-S--------EN 284 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-----------~L~t-~--------e~ 284 (387)
++.+.+.|.+-|++..+--.-..........++.++++.+.. .-|++..=++ .|.+ + +.
T Consensus 39 l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~~i~~ 117 (394)
T 1xla_A 39 VHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKD-TGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAK 117 (394)
T ss_dssp HHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH-HCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHH-cCCeEEEEecCccCCccccCCccCCCCHHHHHHHHHH
Confidence 455567799999987531000001122223455566655543 1233322111 2322 2 33
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCCC----CCCC-hhhhHhHHHHHHHHHH---HcC--CCceEeEe-------ccCCCHHH
Q psy10250 285 IYCASMTAMFAGSDFIKTSTGKEK----TNAT-IPAGIIMCSAIKHFHK---LSG--KKIGLKPA-------GGISTFED 347 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTGf~~----~gat-~~~~~~m~~~v~~~~~---~~~--~~~gIKas-------GGIrt~~~ 347 (387)
+.++.++|.+.|+++|-+.+|+.+ ...+ .+....+.+.++.+.+ ..| -++.+-.- .-+.|.++
T Consensus 118 ~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~~~ 197 (394)
T 1xla_A 118 VLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGH 197 (394)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHH
T ss_pred HHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCccccCCCHHH
Confidence 567888999999999999888631 1122 2233344455555443 334 34555332 35689999
Q ss_pred HHHHHH
Q psy10250 348 SVRWIY 353 (387)
Q Consensus 348 a~~~i~ 353 (387)
+..++.
T Consensus 198 ~~~li~ 203 (394)
T 1xla_A 198 GLAFIE 203 (394)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 999995
No 442
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=56.96 E-value=1.2e+02 Score=27.87 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=95.7
Q ss_pred ccccc-cCCCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHH--------HHHhhhcCCCCCce
Q psy10250 133 FIDLT-TLSGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDV--------IKVLDRENARDDVK 203 (387)
Q Consensus 133 ~ID~T-~L~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a--------~~~L~~~~~~~~v~ 203 (387)
+-.|| +.-.++..++|+++.+.- .+.+|..||+-+... ++..+-. .+ .
T Consensus 9 ~~~~~~~flDta~~~ei~~~~~~g-------------------~i~GvTTNPsi~~k~g~~~~~~i~ei~~iv---~G-~ 65 (230)
T 1vpx_A 9 HHHHMKIFLDTANLEEIKKGVEWG-------------------IVDGVTTNPTLISKEGAEFKQRVKEICDLV---KG-P 65 (230)
T ss_dssp --CCCEEEEECCCHHHHHHHHHTT-------------------CCCEEECCC-----------CHHHHHHHHH---CS-C
T ss_pred cccceEEEEcCCCHHHHHHHHhcC-------------------CcCCCccCHHHHHhcCCCHHHHHHHHHhcc---CC-c
Confidence 33444 233467778887775432 357888888766543 1111100 01 3
Q ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChH
Q psy10250 204 VASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 283 (387)
Q Consensus 204 v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e 283 (387)
|..= +. ...++.-+.|+++..+.+ +. ++|-+..- | +=+++++.+...+..+-+ |-.+ +.+
T Consensus 66 VS~E-V~----a~d~e~mi~eA~~L~~~~-~n--v~IKIP~T----~----eGl~Ai~~L~~eGI~vNv---TliF-S~~ 125 (230)
T 1vpx_A 66 VSAE-VV----SLDYEGMVREARELAQIS-EY--VVIKIPMT----P----DGIKAVKTLSAEGIKTNV---TLVF-SPA 125 (230)
T ss_dssp EEEE-CS----CCSHHHHHHHHHHHHTTC-TT--EEEEEESS----H----HHHHHHHHHHHTTCCEEE---EEEC-SHH
T ss_pred EEEE-Ec----cCCHHHHHHHHHHHHHhC-CC--EEEEeCCC----H----HHHHHHHHHHHCCCCEEE---EEeC-CHH
Confidence 4444 23 678999999999999987 32 56555532 2 335666665544333222 2234 555
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCCCC-CCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 284 NIYCASMTAMFAGSDFIKTSTGKEK-TNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 284 ~i~~a~~ia~~aGaDfVKTSTGf~~-~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
| +.+|.++|++||----|.-. .| .+....+..++.+.+..+.+..|-++ ++|+..+..+.. .+|++
T Consensus 126 Q----A~laa~AGa~~iSpFVgRidd~g---~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~~~v~~~~-----l~G~d 192 (230)
T 1vpx_A 126 Q----AILAAKAGATYVSPFVGRMDDLS---NDGMRMLGEIVEIYNNYGFETEIIAA-SIRHPMHVVEAA-----LMGVD 192 (230)
T ss_dssp H----HHHHHHHTCSEEEEBHHHHHHTT---SCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSHHHHHHHH-----HHTCS
T ss_pred H----HHHHHhCCCeEEEeccchhhhcc---ccHHHHHHHHHHHHHHcCCCeEEEee-ccCCHHHHHHHH-----HhCCC
Confidence 5 34566899999953333210 01 11233345666666666777888886 699999977744 47884
No 443
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=56.87 E-value=79 Score=29.84 Aligned_cols=91 Identities=18% Similarity=0.114 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|-.-+=..++-.+=++.+++.+.+ .++||.=+|-.++.+ -.+.++.|.
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~st~~-ai~la~~A~ 108 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTNNTRT-SVELAEAAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCCCHHH-HHHHHHHHH
Confidence 44555666677889999999884322223333332345555556666666654 378999999885544 556778889
Q ss_pred HcCCCEEecCCCCC
Q psy10250 85 FAGSDFIKTSTGKE 98 (387)
Q Consensus 85 ~ag~dfvKTSTG~~ 98 (387)
++|+|.+=-.+=|.
T Consensus 109 ~~Gadavlv~~P~y 122 (304)
T 3cpr_A 109 SAGADGLLVVTPYY 122 (304)
T ss_dssp HTTCSEEEEECCCS
T ss_pred hcCCCEEEECCCCC
Confidence 99999976555543
No 444
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=56.75 E-value=1.1e+02 Score=28.92 Aligned_cols=128 Identities=9% Similarity=-0.056 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCc--------------cHHHHHHHhhhcCCCCCceEEEEe
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPA--------------RVVDVIKVLDRENARDDVKVASVA 208 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~--------------~v~~a~~~L~~~~~~~~v~v~tVv 208 (387)
...+.++++++.-+ +.|+.++++.-+ .++.+++... ..++|.+=+
T Consensus 30 iD~~~l~~lv~~li----------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-----grvpViaGv 88 (316)
T 3e96_A 30 IDWHHYKETVDRIV----------------DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-----GRALVVAGI 88 (316)
T ss_dssp BCHHHHHHHHHHHH----------------TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-----TSSEEEEEE
T ss_pred CCHHHHHHHHHHHH----------------HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-----CCCcEEEEe
Confidence 45567777777766 567788877652 2334444433 246554442
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
|. .+..-+..++.|.+.|||-+=++.++- ..-+.+.+++-.++|.++++-+..+-=+ -..| +.+.+.+.
T Consensus 89 -----g~-~t~~ai~la~~A~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~--g~~l-~~~~~~~L 157 (316)
T 3e96_A 89 -----GY-ATSTAIELGNAAKAAGADAVMIHMPIH--PYVTAGGVYAYFRDIIEALDFPSLVYFK--DPEI-SDRVLVDL 157 (316)
T ss_dssp -----CS-SHHHHHHHHHHHHHHTCSEEEECCCCC--SCCCHHHHHHHHHHHHHHHTSCEEEEEC--CTTS-CTHHHHHH
T ss_pred -----Cc-CHHHHHHHHHHHHhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEeC--CCCC-CHHHHHHH
Confidence 44 677788899999999999997776652 3346788999999999988532222211 3456 56766554
Q ss_pred HHHHHHcCCCEEEcCCC
Q psy10250 289 SMTAMFAGSDFIKTSTG 305 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTG 305 (387)
+..-.+-.||=|+|
T Consensus 158 ---a~~pnIvgiKdssg 171 (316)
T 3e96_A 158 ---APLQNLVGVKYAIN 171 (316)
T ss_dssp ---TTCTTEEEEEECCC
T ss_pred ---HcCCCEEEEEeCCC
Confidence 43356788998887
No 445
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=56.58 E-value=85 Score=30.13 Aligned_cols=184 Identities=13% Similarity=0.075 Sum_probs=93.2
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEEC----CccH----------HHHHHHhhhcCCCCCceEE
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVY----PARV----------VDVIKVLDRENARDDVKVA 205 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~----P~~v----------~~a~~~L~~~~~~~~v~v~ 205 (387)
+...+.++..++++... +.|+..+=+. |-++ ...+. +... .+++++
T Consensus 18 ~~~~~~~~k~~ia~~L~----------------~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~-i~~~---~~~~~~ 77 (320)
T 3dxi_A 18 NWDFNSKIVDAYILAMN----------------ELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKH-LRNI---STKKIA 77 (320)
T ss_dssp TTCCCHHHHHHHHHHHH----------------TTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHH-HHHH---CCSEEE
T ss_pred CCcCCHHHHHHHHHHHH----------------HhCCCEEEEecccCCccccccccccChHHHHHH-Hhhc---cCCeEE
Confidence 44567788888877665 4455555443 6553 22222 2211 467887
Q ss_pred EEecCCCCCCC-CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCC-CcceEEEEee--ccCCC
Q psy10250 206 SVAAGFPSGQY-LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAV--GELKT 281 (387)
Q Consensus 206 tVvigFP~G~~-~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~-~~~lKvIlEt--~~L~t 281 (387)
..+ |.... +-. +.++..+.+.|+|++=+..+.. + .++...+++.++. +..+-+-+|. ++- +
T Consensus 78 ~L~---r~~~~~~~d--v~~~~~a~~~Gvd~~ri~~~~~-----n----le~~~~~v~~ak~~G~~v~~~~~~~~~~~-~ 142 (320)
T 3dxi_A 78 IML---NEKNTTPED--LNHLLLPIIGLVDMIRIAIDPQ-----N----IDRAIVLAKAIKTMGFEVGFNVMYMSKWA-E 142 (320)
T ss_dssp EEE---EGGGCCGGG--HHHHHGGGTTTCSEEEEEECGG-----G----HHHHHHHHHHHHTTTCEEEEEECCTTTGG-G
T ss_pred EEe---cCCCCChhh--HHHHHHhhhcCCCEEEEEecHH-----H----HHHHHHHHHHHHHCCCEEEEEEEeCCCCC-C
Confidence 763 22111 112 2334445568999987775442 1 3444455444543 2344444552 121 1
Q ss_pred hH-HHHHHHHHHHHcCCCE--EEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe--ccCCCHHHHHHHHHHHH
Q psy10250 282 SE-NIYCASMTAMFAGSDF--IKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA--GGISTFEDSVRWIYLVL 356 (387)
Q Consensus 282 ~e-~i~~a~~ia~~aGaDf--VKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas--GGIrt~~~a~~~i~l~~ 356 (387)
++ .+.++.+ +++|+|. ++-++|. .+|+.+..+++.+ ++..+-.+++-.- -|....+.. .-+
T Consensus 143 ~~~~l~~~~~--~~~G~~~i~l~Dt~G~----~~P~~~~~lv~~l---~~~~~~~i~~H~Hn~~G~a~an~l-aA~---- 208 (320)
T 3dxi_A 143 MNGFLSKLKA--IDKIADLFCMVDSFGG----ITPKEVKNLLKEV---RKYTHVPVGFHGHDNLQLGLINSI-TAI---- 208 (320)
T ss_dssp STTSGGGGGG--GTTTCSEEEEECTTSC----CCHHHHHHHHHHH---HHHCCSCEEEECBCTTSCHHHHHH-HHH----
T ss_pred HHHHHHHHHH--hhCCCCEEEECcccCC----CCHHHHHHHHHHH---HHhCCCeEEEEeCCCCccHHHHHH-HHH----
Confidence 21 2333333 4679995 4567775 4787766655444 5555544444421 122222222 222
Q ss_pred HhcCCCccCCCcceeec
Q psy10250 357 IMLGPDWLNKDLFRIGA 373 (387)
Q Consensus 357 ~~~Ga~w~~~~~~RIGt 373 (387)
++|+++++....=+|-
T Consensus 209 -~aGa~~vd~si~GlG~ 224 (320)
T 3dxi_A 209 -DDGIDFIDATITGMGR 224 (320)
T ss_dssp -HTTCSEEEEBGGGCSS
T ss_pred -HhCCCEEEEeccccCC
Confidence 5899777655555554
No 446
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=56.42 E-value=38 Score=32.74 Aligned_cols=125 Identities=10% Similarity=-0.007 Sum_probs=64.8
Q ss_pred CCCCHHHHHHHHHHHHHC--CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHH
Q psy10250 214 GQYLLETRLHEIELLAKQ--KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMT 291 (387)
Q Consensus 214 G~~~~e~K~~Ea~~Ai~~--GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~i 291 (387)
|+.+.+.-..+++..-+. +.--+.++++... ..+.+.+.+-.+.+...|.. .-+.++. ..+.+++.+....++
T Consensus 43 ~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~--~~~~~~~~~~~~~l~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~ 117 (369)
T 3bw2_A 43 GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPE--LAESGAVEVYAHQLAGEAAW-YETELGD--PDGGRDDGYDAKLAV 117 (369)
T ss_dssp TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCC--C---CHHHHHHHHTHHHHHH-TTCCCCC--SCSCSSTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCC--cccHHHHHHHHHHHHHHHHH-cCCCcCc--ccccccccHHHHHHH
Confidence 556666555555555443 2224444444321 12333344444444444432 1122221 222122334556788
Q ss_pred HHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 292 AMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 292 a~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
+.+.|+|+|-+.-|- .+. +.++.+++. ++++...+.|.+++.... .+|+|++
T Consensus 118 ~~~~g~~~V~~~~g~----~~~-------~~i~~~~~~-----g~~v~~~v~t~~~a~~a~-----~~GaD~i 169 (369)
T 3bw2_A 118 LLDDPVPVVSFHFGV----PDR-------EVIARLRRA-----GTLTLVTATTPEEARAVE-----AAGADAV 169 (369)
T ss_dssp HHHSCCSEEEEESSC----CCH-------HHHHHHHHT-----TCEEEEEESSHHHHHHHH-----HTTCSEE
T ss_pred HHhcCCCEEEEeCCC----CcH-------HHHHHHHHC-----CCeEEEECCCHHHHHHHH-----HcCCCEE
Confidence 999999999764432 122 234444432 455555688999998887 5899877
No 447
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=56.40 E-value=70 Score=30.73 Aligned_cols=197 Identities=13% Similarity=0.036 Sum_probs=114.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|-.-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ -.+.++.|.
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~e-ai~la~~A~ 126 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRTDE-AVALAKDAE 126 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHH-HHHHHHHHH
Confidence 44455555677889999999885433333444333456666666777776665 378999999875544 556778889
Q ss_pred HcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHhc
Q psy10250 85 FAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKAI 156 (387)
Q Consensus 85 ~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A~ 156 (387)
++|+|.+=-.+=|... . ++ +.-..+++.++.-.|.-+ -.-+.+.+.+.+|.+ .
T Consensus 127 ~~Gadavlv~~P~Y~~-~---------------s~-~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~--~ 187 (332)
T 2r8w_A 127 AAGADALLLAPVSYTP-L---------------TQ-EEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY--I 187 (332)
T ss_dssp HHTCSEEEECCCCSSC-C---------------CH-HHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT--S
T ss_pred hcCCCEEEECCCCCCC-C---------------CH-HHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc--C
Confidence 9999998766654322 1 11 222233444444333221 123567888888853 2
Q ss_pred CCCcHHHHHHHhhhccCCCeEEEEECCcc----HHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCC
Q psy10250 157 QPLSEELKEKVLHQQANVHTAAVCVYPAR----VVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQK 232 (387)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~aVcV~P~~----v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~G 232 (387)
-++.+|=-...- +....+++... +.++. .. .| . + .-+-.++..|
T Consensus 188 -----------------pnIvgiKdssgd~~~~~~~~~~l~~~~--~~~f~--v~-~G----~---D---~~~l~~l~~G 235 (332)
T 2r8w_A 188 -----------------PNIRAIKMPLPADADYAGELARLRPKL--SDDFA--IG-YS----G---D---WGCTDATLAG 235 (332)
T ss_dssp -----------------TTEEEEEECCCTTCCHHHHHHHHTTTS--CTTCE--EE-EC----C---H---HHHHHHHHTT
T ss_pred -----------------CCEEEEEeCCCCchhHHHHHHHHHHhc--CCCEE--EE-eC----c---h---HHHHHHHHCC
Confidence 256666555444 77777666431 12333 23 13 2 1 2245567788
Q ss_pred CCeeee-ecCc---------hhhhcCChhHHHH
Q psy10250 233 VDEVDI-VIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 233 AdEID~-Vin~---------~~lk~g~~~~v~~ 255 (387)
++-.=- .-|+ .++++||++..++
T Consensus 236 ~~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~ 268 (332)
T 2r8w_A 236 GDTWYSVVAGLLPVPALQLMRAAQAGNAEEAKR 268 (332)
T ss_dssp CSEEEESGGGTCHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHH
Confidence 886432 3443 5667788776544
No 448
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=56.33 E-value=49 Score=32.58 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=98.1
Q ss_pred CCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCch-----hhhc------C----ChhHHHH---HHHHHH
Q psy10250 200 DDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRS-----LVLN------N----QWPELFS---EVKQMK 261 (387)
Q Consensus 200 ~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~-----~lk~------g----~~~~v~~---Ei~~v~ 261 (387)
..+++-+.+ + ..+.+.-..+++.+++.|.+-+-+=+-.. .+.. + ..+.+.+ -+++++
T Consensus 141 ~~v~~y~~~-~----~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR 215 (421)
T 4hnl_A 141 TAIPAYTHA-V----ADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIK 215 (421)
T ss_dssp SCEEEEEEE-E----ESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred cccceeccc-C----CCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHH
Confidence 356665552 2 34677778899999999998876543210 0000 0 0123444 456677
Q ss_pred HHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEecc
Q psy10250 262 EKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGG 341 (387)
Q Consensus 262 ~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGG 341 (387)
++.++ -+++.++...--+.++-.+.++...+.+..|+--..- +++.. ..+.++ .++++..++|
T Consensus 216 ~a~G~--~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~-------~~d~~----~~~~l~----~~~~ipIa~d 278 (421)
T 4hnl_A 216 EKYGN--QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLEDILP-------PDQSH----WLTQLR----SQSATPIATG 278 (421)
T ss_dssp HHHTT--SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSC-------GGGGG----GHHHHH----TTCCCCEEEC
T ss_pred HHhCC--CceEeccccccCCHHHHHHHHHHhhhhhhcccccCCc-------ccchH----HHHHHH----hcCCCCeecC
Confidence 77765 4788888754447777778888888999999975542 22221 223333 3455666664
Q ss_pred --CCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 342 --ISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 342 --Irt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+.+..++..+++ .-.++.++++..++|. +.++++..
T Consensus 279 E~~~~~~~~~~~i~----~~a~d~v~~d~~~~GGite~~~ia~ 317 (421)
T 4hnl_A 279 ELFNNPMEWQELVK----NRQIDFMRAHVSQIGGITPALKLAH 317 (421)
T ss_dssp TTCCSGGGTHHHHH----TTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred cceehhHHHHHHHh----cCCceEEEeCCCCCCCHHHHHHHHH
Confidence 678899999985 3346788999999964 55665544
No 449
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=56.31 E-value=97 Score=28.96 Aligned_cols=139 Identities=11% Similarity=-0.060 Sum_probs=87.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHH
Q psy10250 209 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 288 (387)
Q Consensus 209 igFP~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a 288 (387)
.=|+.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=.+++-.+=++.+++.+.+ .+.||.=++-.++ ++-.+.
T Consensus 11 TPf~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~l 87 (292)
T 2vc6_A 11 TPFADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG--RVPVIAGAGSNST-AEAIAF 87 (292)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSH-HHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccH-HHHHHH
Confidence 4555566777777788999999999985444344444444455555666667776654 4789999999866 456678
Q ss_pred HHHHHHcCCCEEEcCCCCCCCCCChhhhHhH--------------------------HHHHHHHHHHcCCCceEeEeccC
Q psy10250 289 SMTAMFAGSDFIKTSTGKEKTNATIPAGIIM--------------------------CSAIKHFHKLSGKKIGLKPAGGI 342 (387)
Q Consensus 289 ~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m--------------------------~~~v~~~~~~~~~~~gIKasGGI 342 (387)
++.|.++|+|.+=-.+=|... .|.+....- .+.++.+.+..++=+|||-|.|
T Consensus 88 a~~A~~~Gadavlv~~P~y~~-~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~g- 165 (292)
T 2vc6_A 88 VRHAQNAGADGVLIVSPYYNK-PTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDATG- 165 (292)
T ss_dssp HHHHHHTTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSC-
T ss_pred HHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCCC-
Confidence 889999999987655544221 232222111 1233334442577789999876
Q ss_pred CCHHHHHHHHH
Q psy10250 343 STFEDSVRWIY 353 (387)
Q Consensus 343 rt~~~a~~~i~ 353 (387)
+..+..+++.
T Consensus 166 -d~~~~~~~~~ 175 (292)
T 2vc6_A 166 -NLLRPSLERM 175 (292)
T ss_dssp -CTHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 3445555553
No 450
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=56.25 E-value=1.1e+02 Score=27.49 Aligned_cols=118 Identities=11% Similarity=0.134 Sum_probs=70.1
Q ss_pred CCCeEEEEECCcc--------HHHHHHHhhhcCCCCCceEEEEecCCC-------------CCCCCH-------HHHHHH
Q psy10250 173 NVHTAAVCVYPAR--------VVDVIKVLDRENARDDVKVASVAAGFP-------------SGQYLL-------ETRLHE 224 (387)
Q Consensus 173 ~~~~~aVcV~P~~--------v~~a~~~L~~~~~~~~v~v~tVvigFP-------------~G~~~~-------e~K~~E 224 (387)
++||.+|-+.+.. +...++.++. .++++.++..+|| .|.... +.=...
T Consensus 32 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~----~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 107 (290)
T 3tva_A 32 DLKVPTVQVHAPHPHTRTREHAQAFRAKCDA----AGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEI 107 (290)
T ss_dssp HTTCSEEEEECCCGGGCSHHHHHHHHHHHHH----TTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHH
T ss_pred HcCCCEEEecCCCCCcCCHHHHHHHHHHHHH----cCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHH
Confidence 5677777776532 6667778875 6899877732332 122121 112234
Q ss_pred HHHHHHCCCCeeeeecCchhh---hcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 225 IELLAKQKVDEVDIVIQRSLV---LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~l---k~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
++.|.+.|++-|=+ ..|.. ....|+.+.+-++++.+.+.. .-+++-||+.. .+.+++ .++..+.|.+.++
T Consensus 108 i~~a~~lG~~~v~~--~~G~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~-~~~~~~---~~l~~~~~~~~~g 180 (290)
T 3tva_A 108 SDFASWVGCPAIGL--HIGFVPESSSPDYSELVRVTQDLLTHAAN-HGQAVHLETGQ-ESADHL---LEFIEDVNRPNLG 180 (290)
T ss_dssp HHHHHHHTCSEEEE--CCCCCCCTTSHHHHHHHHHHHHHHHHHHT-TTCEEEEECCS-SCHHHH---HHHHHHHCCTTEE
T ss_pred HHHHHHcCCCEEEE--cCCCCcccchHHHHHHHHHHHHHHHHHHH-cCCEEEEecCC-CCHHHH---HHHHHhcCCCCEE
Confidence 56677789998643 33322 222466677777777777754 45899999974 454444 4555555665554
No 451
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.22 E-value=61 Score=28.95 Aligned_cols=67 Identities=18% Similarity=0.115 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 285 IYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
....++.+.++|+|+|--+..-+. +... ....+.++.+++.+ .+.|=+.|||++.+++..++ .+|++
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~-~~~~---~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~-----~~Gad 98 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITAS-VEKR---KTMLELVEKVAEQI--DIPFTVGGGIHDFETASELI-----LRGAD 98 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCS-SSHH---HHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHH-----HTTCS
T ss_pred HHHHHHHHHHcCCCEEEEECCchh-hcCC---cccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHH-----HcCCC
Confidence 344557788999999864432111 1111 11224455555433 46677889999999999999 58984
No 452
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=55.94 E-value=69 Score=30.48 Aligned_cols=203 Identities=12% Similarity=0.072 Sum_probs=117.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 4 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
.|.-..+.=..-+++.++.|++-|=+.=..|..-+=.+++-.+=++.+++.+.+ .+.||.=+|-.++.+ ..+.++.|
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~e-ai~la~~A 114 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGANSTRE-AVALTEAA 114 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHH-HHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHH-HHHHHHHH
Confidence 344555666677889999999986333333444443456666666677777665 378999999885544 55677888
Q ss_pred HHcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHh
Q psy10250 84 MFAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKA 155 (387)
Q Consensus 84 ~~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A 155 (387)
.++|+|.+=-.+=|... . ++ +.-..++++++...|.-+ -.-+.+.+.+.++.+
T Consensus 115 ~~~Gadavlv~~P~y~~-~---------------s~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~-- 175 (314)
T 3qze_A 115 KSGGADACLLVTPYYNK-P---------------TQ-EGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK-- 175 (314)
T ss_dssp HHTTCSEEEEECCCSSC-C---------------CH-HHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT--
T ss_pred HHcCCCEEEEcCCCCCC-C---------------CH-HHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc--
Confidence 99999997766554322 1 11 222234444444434322 134677888888862
Q ss_pred cCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCe
Q psy10250 156 IQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDE 235 (387)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdE 235 (387)
. -++.++=-...-+....++++.. +.++.| . .|.... +-.++..|++-
T Consensus 176 ~-----------------pnIvgiKdssgd~~~~~~~~~~~--~~~f~v--~-----~G~d~~------~l~~l~~Ga~G 223 (314)
T 3qze_A 176 V-----------------PNIIGIKEATGDLQRAKEVIERV--GKDFLV--Y-----SGDDAT------AVELMLLGGKG 223 (314)
T ss_dssp S-----------------TTEEEEEECSCCHHHHHHHHHHS--CTTSEE--E-----ESCGGG------HHHHHHTTCCE
T ss_pred C-----------------CCEEEEEcCCCCHHHHHHHHHHc--CCCeEE--E-----ecChHH------HHHHHHCCCCE
Confidence 2 26666666655566666665432 224433 3 133222 45577889887
Q ss_pred ee-eecCc---------hhhhcCChhHHHHHHHHH
Q psy10250 236 VD-IVIQR---------SLVLNNQWPELFSEVKQM 260 (387)
Q Consensus 236 ID-~Vin~---------~~lk~g~~~~v~~Ei~~v 260 (387)
.= ..-|+ .++++||++..++--..+
T Consensus 224 ~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 258 (314)
T 3qze_A 224 NISVTANVAPRAMSDLCAAAMRGDAAAARAINDRL 258 (314)
T ss_dssp EEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEecHHhhhHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 52 22333 456678877655433333
No 453
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=55.85 E-value=39 Score=33.05 Aligned_cols=82 Identities=15% Similarity=0.072 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCC------CCC---------CCCCC-hhhhHhHHHHHHHHHHHcCCC--ceEeEeccC
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTST------GKE---------KTNAT-IPAGIIMCSAIKHFHKLSGKK--IGLKPAGGI 342 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTST------Gf~---------~~gat-~~~~~~m~~~v~~~~~~~~~~--~gIKasGGI 342 (387)
+.++..+.++.+.+.|.+.||--- |+. .+|.. .......++-|+.+++.+|.. +.|.+-||.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 567777788888889999998642 431 01111 123344456677777778764 667777776
Q ss_pred CCHHHHHHHHHHHHHhcCCCcc
Q psy10250 343 STFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 343 rt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
|.++|++++...+ .+|.+|+
T Consensus 230 -~~~~ai~~~~~l~-~~~i~~i 249 (410)
T 2gl5_A 230 -GTNSAIQFAKAIE-KYRIFLY 249 (410)
T ss_dssp -CHHHHHHHHHHHG-GGCEEEE
T ss_pred -CHHHHHHHHHHHH-hcCCCeE
Confidence 6899999987643 4688888
No 454
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=55.85 E-value=26 Score=32.21 Aligned_cols=126 Identities=10% Similarity=0.029 Sum_probs=65.2
Q ss_pred HHHHHHCCCCeeeeecCch-hhhcCChhHHHHHHHHHHHHhCCCcce-EEEEeeccC---CC-h---------HHHHHHH
Q psy10250 225 IELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHM-KTILAVGEL---KT-S---------ENIYCAS 289 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~-~lk~g~~~~v~~Ei~~v~~~~~~~~~l-KvIlEt~~L---~t-~---------e~i~~a~ 289 (387)
.+.+.+.|.+-|++..+.. .+....++ ..++.++++.+.. .-+ .+.+-.++. .+ + +.+.+++
T Consensus 24 l~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~~i 100 (303)
T 3aal_A 24 SEEAASYGANTFMIYTGAPQNTKRKSIE--ELNIEAGRQHMQA-HGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRAEI 100 (303)
T ss_dssp HHHHHHTTCSEEEEESSCTTCCCCCCSG--GGCHHHHHHHHHH-TTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCCccCCCCCC--HHHHHHHHHHHHH-cCCceEEEeccccccCCCCCcHHHHHHHHHHHHHHH
Confidence 4566788999999954332 11111111 1234444444432 123 344444432 11 1 2345567
Q ss_pred HHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHc-CCCceEeEecc-----CCCHHHHHHHHH
Q psy10250 290 MTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLS-GKKIGLKPAGG-----ISTFEDSVRWIY 353 (387)
Q Consensus 290 ~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~-~~~~gIKasGG-----Irt~~~a~~~i~ 353 (387)
++|.+.|+.+|-+-+|+.......+....+.+.++.+.+.. +-++.|-.-.| ..|.+++..+++
T Consensus 101 ~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li~ 170 (303)
T 3aal_A 101 ERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYIID 170 (303)
T ss_dssp HHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHHH
Confidence 88999999999988886432212222333334444332222 23444444422 248999999996
No 455
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=55.82 E-value=75 Score=29.73 Aligned_cols=89 Identities=18% Similarity=0.036 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy10250 7 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFA 86 (387)
Q Consensus 7 ~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~a 86 (387)
-..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .++||.=+|-.++.+ ..+.++.|.++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t~~-ai~la~~a~~~ 95 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNTAA-SIAMSKWAESI 95 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHH-HHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHH-HHHHHHHHHhc
Confidence 455555667889999999884333333334333456666666677776665 368999999875544 55677888999
Q ss_pred CCCEEecCCCCC
Q psy10250 87 GSDFIKTSTGKE 98 (387)
Q Consensus 87 g~dfvKTSTG~~ 98 (387)
|+|.+=-.+=|.
T Consensus 96 Gadavlv~~P~y 107 (291)
T 3a5f_A 96 GVDGLLVITPYY 107 (291)
T ss_dssp TCSEEEEECCCS
T ss_pred CCCEEEEcCCCC
Confidence 999986655543
No 456
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=55.72 E-value=61 Score=30.46 Aligned_cols=91 Identities=11% Similarity=-0.040 Sum_probs=60.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .++||.=+|-.++.+ -.+.++.|.
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~-ai~la~~A~ 95 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSIED-AADQSAEAL 95 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccHHH-HHHHHHHHH
Confidence 45555666677899999999884333333333333355555556666666654 367999999875544 556777889
Q ss_pred HcCCCEEecCCCCC
Q psy10250 85 FAGSDFIKTSTGKE 98 (387)
Q Consensus 85 ~ag~dfvKTSTG~~ 98 (387)
++|+|.+=-.+-|.
T Consensus 96 ~~Gadavlv~~P~y 109 (294)
T 3b4u_A 96 NAGARNILLAPPSY 109 (294)
T ss_dssp HTTCSEEEECCCCS
T ss_pred hcCCCEEEEcCCcC
Confidence 99999987666654
No 457
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.63 E-value=1.4e+02 Score=28.22 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=70.9
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+ + .+.||.=++-.
T Consensus 11 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~ 86 (313)
T 3dz1_A 11 GTFAIAP-TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAP 86 (313)
T ss_dssp EEEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCS
T ss_pred eEEEEee-CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCC
Confidence 3444444 456 56777788888889999999999973333344444434555555566666766 4 48899999988
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf 306 (387)
++. +..+.++.|.++|+|.+=-.+-|
T Consensus 87 ~t~-~ai~la~~A~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 87 GFA-AMRRLARLSMDAGAAGVMIAPPP 112 (313)
T ss_dssp SHH-HHHHHHHHHHHHTCSEEEECCCT
T ss_pred CHH-HHHHHHHHHHHcCCCEEEECCCC
Confidence 664 45577899999999988776665
No 458
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=55.55 E-value=37 Score=30.38 Aligned_cols=113 Identities=15% Similarity=0.112 Sum_probs=63.0
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHH-HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc--CCCEE
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPEL-FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA--GSDFI 300 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v-~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a--GaDfV 300 (387)
.++.+.+.|||-|=+-..- .+.. .+.++.+++. -+++++-..-= |+.+.. +...+. ++|||
T Consensus 79 ~i~~~~~agad~v~vH~~~-------~~~~~~~~~~~i~~~-----g~~igv~~~p~-t~~e~~---~~~~~~~~~~d~v 142 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEV-------SRDNWQELIQSIKAK-----GMRPGVSLRPG-TPVEEV---FPLVEAENPVELV 142 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGG-------CTTTHHHHHHHHHHT-----TCEEEEEECTT-SCGGGG---HHHHHSSSCCSEE
T ss_pred HHHHHHHcCCCEEEECCCC-------cccHHHHHHHHHHHc-----CCCEEEEEeCC-CCHHHH---HHHHhcCCCCCEE
Confidence 4777788899876444321 1122 4445555431 25677665322 332221 122344 89999
Q ss_pred EcCC---CCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 301 KTST---GKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 301 KTST---Gf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
=--| ||+. .+. ...+++.++.+++..+ ++.|=+.|||+. +++..++ .+|+|.
T Consensus 143 l~~sv~pg~~g--~~~--~~~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~-----~aGaD~ 197 (228)
T 1h1y_A 143 LVMTVEPGFGG--QKF--MPEMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAA-----SAGANC 197 (228)
T ss_dssp EEESSCTTCSS--CCC--CGGGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHH-----HHTCCE
T ss_pred EEEeecCCCCc--ccC--CHHHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHH-----HcCCCE
Confidence 4322 3332 121 1123456777777653 677888999998 7888888 469864
No 459
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=55.49 E-value=38 Score=32.06 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHH
Q psy10250 250 WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKL 329 (387)
Q Consensus 250 ~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~ 329 (387)
.+.+.++++++++.+..+..+-+++.. .+.. .......+.+.++|+|+|-++-|. +. +.++.+++.
T Consensus 52 ~~~l~~~i~~i~~~~~~p~~v~l~v~~-~~~~-~~~~~~~~~~~~~g~d~V~~~~g~------p~------~~~~~l~~~ 117 (328)
T 2gjl_A 52 PEALAAEIARCRELTDRPFGVNLTLLP-TQKP-VPYAEYRAAIIEAGIRVVETAGND------PG------EHIAEFRRH 117 (328)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEEECC-CSSC-CCHHHHHHHHHHTTCCEEEEEESC------CH------HHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeccc-cccC-ccHHHHHHHHHhcCCCEEEEcCCC------cH------HHHHHHHHc
Confidence 577888999998877533455666631 1101 223445677889999999865442 11 233444432
Q ss_pred cCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 330 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 330 ~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
|+|+...+.+.+++.... ..|+|++
T Consensus 118 -----gi~vi~~v~t~~~a~~~~-----~~GaD~i 142 (328)
T 2gjl_A 118 -----GVKVIHKCTAVRHALKAE-----RLGVDAV 142 (328)
T ss_dssp -----TCEEEEEESSHHHHHHHH-----HTTCSEE
T ss_pred -----CCCEEeeCCCHHHHHHHH-----HcCCCEE
Confidence 466666789999999888 5899866
No 460
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=55.44 E-value=1.5e+02 Score=28.64 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHH-CCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~-~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
.++.-+.+++.+++ .|.+-+-+=+.. .+.+.-.+-+++|+++.++ -+.+.+....-=+.++-.+.++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~-----~~~~~d~~~v~avR~a~g~--~~~l~vDaN~~~~~~~A~~~~~~l~~~ 220 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGA-----GEVDRDLAHVIAIKKALGD--SASVRVDVNQAWDEAVALRACRILGGN 220 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCS-----SCHHHHHHHHHHHHHHHGG--GSEEEEECTTCBCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCC-----CCHHHHHHHHHHHHHHcCC--CCeEEEeCCCCCCHHHHHHHHHHHhhc
Confidence 56666778888888 588887764321 2334555667788888874 357777764333667777777888888
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|..||--+.-- ..+ +..+.+++.+ .+.|=+-.-+.+..++..++. .-++++++++..|+|. +
T Consensus 221 ~i~~iEqP~~~----~d~-------~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~----~~~~d~v~~k~~~~GGit 283 (382)
T 3dgb_A 221 GIDLIEQPISR----NNR-------AGMVRLNASS--PAPIMADESIECVEDAFNLAR----EGAASVFALKIAKNGGPR 283 (382)
T ss_dssp TCCCEECCBCT----TCH-------HHHHHHHHHC--SSCEEESTTCSSHHHHHHHHH----HTCCSEEEECHHHHTSHH
T ss_pred CcCeeeCCCCc----cCH-------HHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHH----cCCCCEEEecccccCCHH
Confidence 99999854321 122 3455555543 344544445889999999985 3457788888888864 5
Q ss_pred chHHHHH
Q psy10250 375 SLLNNIL 381 (387)
Q Consensus 375 s~~~il~ 381 (387)
.++++..
T Consensus 284 ~~~~i~~ 290 (382)
T 3dgb_A 284 ATLRTAA 290 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 461
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=55.37 E-value=32 Score=31.70 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=38.1
Q ss_pred HHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHH---HHhCCCcceEEEEee---ccCCChHHHHHH---HHHHHHc
Q psy10250 225 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMK---EKCGEKIHMKTILAV---GELKTSENIYCA---SMTAMFA 295 (387)
Q Consensus 225 a~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~---~~~~~~~~lKvIlEt---~~L~t~e~i~~a---~~ia~~a 295 (387)
+..|.+.|||-|..+-|+. .|=...=+..++.++ +.+. .++-|+|=- ++.-+++|+... .+.+.++
T Consensus 14 a~~A~~~GAdRIELc~~L~---~GGlTPS~g~i~~~~~~~~~~~--ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLA---VGGTTPSYGVIKEANQYLHEKG--ISVAVMIRPRGGNFVYNDLELRIMEEDILRAVEL 88 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGG---GTCBCCCHHHHHHHHHHHHHTT--CEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcCCcc---cCCcCCCHHHHHHHHHhhhhcC--CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 4456667777777776542 232333333344443 3332 567777732 334355555543 3456777
Q ss_pred CCCEEE
Q psy10250 296 GSDFIK 301 (387)
Q Consensus 296 GaDfVK 301 (387)
|+|-|-
T Consensus 89 GadGvV 94 (224)
T 2bdq_A 89 ESDALV 94 (224)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 777554
No 462
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=55.33 E-value=42 Score=32.08 Aligned_cols=88 Identities=14% Similarity=0.137 Sum_probs=51.9
Q ss_pred CCCCCC--CHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHH---cccCccEEEEEeccCCCCHHHH
Q psy10250 2 FPSGQY--LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEK---CEEKIHMKTILAVGELKTSENI 76 (387)
Q Consensus 2 FP~G~~--~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~---~~~~~~~KvIlEt~~L~~~e~i 76 (387)
|..|.. ..+.=+..+++.++.|||=||+-.--..--. ..-...+|++.++.+ .....-+.+.|.|. +.+-+
T Consensus 53 Fsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga-~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~---~~~V~ 128 (297)
T 1tx2_A 53 FSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGF-AKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY---KAEVA 128 (297)
T ss_dssp TCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----C-CCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS---CHHHH
T ss_pred cccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCC-CCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC---CHHHH
Confidence 666643 2455566789999999999999853321111 122346677666633 22211245677773 33433
Q ss_pred HHHHHHHHHcCCCEEecCCCC
Q psy10250 77 YYASMTAMFAGSDFIKTSTGK 97 (387)
Q Consensus 77 ~~a~~~a~~ag~dfvKTSTG~ 97 (387)
+.|.++|++.|..-||+
T Consensus 129 ----~aAl~aGa~iINdvsg~ 145 (297)
T 1tx2_A 129 ----KQAIEAGAHIINDIWGA 145 (297)
T ss_dssp ----HHHHHHTCCEEEETTTT
T ss_pred ----HHHHHcCCCEEEECCCC
Confidence 34456699999888885
No 463
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=54.98 E-value=58 Score=29.50 Aligned_cols=120 Identities=12% Similarity=0.137 Sum_probs=66.2
Q ss_pred CCCeEEEEECCc--------------cHHHHHHHhhhcCCCCCceEEEEecC----CCCCCCCHHH-------HHHHHHH
Q psy10250 173 NVHTAAVCVYPA--------------RVVDVIKVLDRENARDDVKVASVAAG----FPSGQYLLET-------RLHEIEL 227 (387)
Q Consensus 173 ~~~~~aVcV~P~--------------~v~~a~~~L~~~~~~~~v~v~tVvig----FP~G~~~~e~-------K~~Ea~~ 227 (387)
+.||.+|-+... .+...++.++. .++++.++-.. ||++....+. =...++.
T Consensus 41 ~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 116 (295)
T 3cqj_A 41 TLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVE----TGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQF 116 (295)
T ss_dssp HTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHH----HCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHH----cCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 457777766532 24456777775 58888765211 3455443332 2234566
Q ss_pred HHHCCCCeeeeecCchhh-h----cCChhHHHHHHHHHHHHhCCCcceEEEEeecc---CCChHHHHHHHHHHHHcCCCE
Q psy10250 228 LAKQKVDEVDIVIQRSLV-L----NNQWPELFSEVKQMKEKCGEKIHMKTILAVGE---LKTSENIYCASMTAMFAGSDF 299 (387)
Q Consensus 228 Ai~~GAdEID~Vin~~~l-k----~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~---L~t~e~i~~a~~ia~~aGaDf 299 (387)
|.+.|++-| |+.-+.. . ...|+.+.+-++++.+.+.. .-+++-||+.. +.+.++ +.+++.+.|.+.
T Consensus 117 A~~lG~~~v--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lEn~~~~~~~~~~~---~~~l~~~v~~~~ 190 (295)
T 3cqj_A 117 AQDVGIRVI--QLAGYDVYYQEANNETRRRFRDGLKESVEMASR-AQVTLAMEIMDYPLMNSISK---ALGYAHYLNNPW 190 (295)
T ss_dssp HHHHTCCEE--EECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHH-HTCEEEEECCSSGGGCSHHH---HHHHHHHHCCTT
T ss_pred HHHcCCCEE--EECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHH-hCCEEEEeeCCCcccCCHHH---HHHHHHhcCCCC
Confidence 777899875 3331110 1 11345555666666666643 34899999854 434444 445555556665
Q ss_pred EEc
Q psy10250 300 IKT 302 (387)
Q Consensus 300 VKT 302 (387)
++-
T Consensus 191 vg~ 193 (295)
T 3cqj_A 191 FQL 193 (295)
T ss_dssp EEE
T ss_pred eEE
Confidence 553
No 464
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=54.85 E-value=1.4e+02 Score=28.06 Aligned_cols=102 Identities=23% Similarity=0.195 Sum_probs=70.9
Q ss_pred CceEEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC
Q psy10250 201 DVKVASVAAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 279 (387)
Q Consensus 201 ~v~v~tVvigF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L 279 (387)
++-++.+ .=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+++ .++||.=++-.
T Consensus 19 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~ 95 (304)
T 3cpr_A 19 TVGVAMV-TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTN 95 (304)
T ss_dssp SEEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCS
T ss_pred ceEEeee-ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCC
Confidence 3444444 556 4677778888888999999999985444444444433445555556666666654 57899999998
Q ss_pred CChHHHHHHHHHHHHcCCCEEEcCCCC
Q psy10250 280 KTSENIYCASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 280 ~t~e~i~~a~~ia~~aGaDfVKTSTGf 306 (387)
++ ++-.+.++.|.++|+|.+=-.+=|
T Consensus 96 st-~~ai~la~~A~~~Gadavlv~~P~ 121 (304)
T 3cpr_A 96 NT-RTSVELAEAAASAGADGLLVVTPY 121 (304)
T ss_dssp CH-HHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CH-HHHHHHHHHHHhcCCCEEEECCCC
Confidence 66 455678889999999987655544
No 465
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=54.83 E-value=35 Score=32.98 Aligned_cols=117 Identities=13% Similarity=0.075 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEE--------CCccHHHHHHHhhhcCCCCCceEEEEecCCCCC
Q psy10250 143 DTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCV--------YPARVVDVIKVLDRENARDDVKVASVAAGFPSG 214 (387)
Q Consensus 143 ~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV--------~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G 214 (387)
.|.++++.+++++. ..|+..|-. .+....+|.++++.. +.+..++++ +||.|
T Consensus 101 ~t~~ei~~~L~~~~----------------~~GI~niLRGDpp~~~~~~~~~~~A~~l~~~~--~~~F~IGvA--~yPe~ 160 (315)
T 3ijd_A 101 YTPDEFRRLTRPVS----------------GQDAFSVFVGAASRNQSVLLKLSDAYKIRQDV--NPDLLLGGV--AIPER 160 (315)
T ss_dssp SCHHHHHHHHSCCT----------------TCCCEEEEECCCC----CCSCHHHHHHHHHHH--CTTSEEEEE--ECGGG
T ss_pred CCHHHHHHHHHHHH----------------HcCCcEEecCCCCCCCCCCcCHHHHHHHHHhc--CCCEEEEEE--ECCCC
Confidence 69999999998887 445544432 233578888877643 346777555 89998
Q ss_pred CCCHHHHHHHHHHHHHCCCCeee--eecCchhhhcCChhHHHHHHH-HHHHHhCCCc-ceEEEEeeccCCChHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVD--IVIQRSLVLNNQWPELFSEVK-QMKEKCGEKI-HMKTILAVGELKTSENIYC 287 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID--~Vin~~~lk~g~~~~v~~Ei~-~v~~~~~~~~-~lKvIlEt~~L~t~e~i~~ 287 (387)
....+.-..-.+.=++.||+-+= ++.|.. .|..+.+.++ ++++ . +. .+.+|.-.--+.+..++..
T Consensus 161 H~~~~~d~~~Lk~KvdAGAdf~ITQ~ffD~e-----~~~~f~~~~~~~~r~-~--Gi~~vPIipGImPi~s~k~~~f 229 (315)
T 3ijd_A 161 HMKNTDEHLRIIDKINKGCKYFITQAVYNVE-----AAKDFLSDYYYYSKN-N--NLKMVPIIFTLTPCGSTKTLEF 229 (315)
T ss_dssp HHHHSCHHHHHHHHHHTTCCEEEESCCCCHH-----HHHHHHHHHHHHHHH-T--TBCCCCEEEEECCCCSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEccccCCHH-----HHHHHHHHHHHHHHH-C--CCCCCcEEEEeeecCCHHHHHH
Confidence 52222223344555678998541 223322 2223333332 2332 2 24 4667777666666555443
No 466
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=54.62 E-value=56 Score=31.07 Aligned_cols=91 Identities=9% Similarity=0.043 Sum_probs=61.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 4 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
.|.-..+.=..-+++.++.|++-|=+.=..|-.-+=.+++-.+=++.+++.+.+ .+.||.=+|- ++.+- .+.++.|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~-st~~a-i~la~~A 102 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGY-SVDTA-IELGKSA 102 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECS-SHHHH-HHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCc-CHHHH-HHHHHHH
Confidence 355566666677899999998873222223333333456666666777776665 3789999998 77664 4577788
Q ss_pred HHcCCCEEecCCCCC
Q psy10250 84 MFAGSDFIKTSTGKE 98 (387)
Q Consensus 84 ~~ag~dfvKTSTG~~ 98 (387)
.++|+|.+=-.+=|.
T Consensus 103 ~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 103 IDSGADCVMIHQPVH 117 (314)
T ss_dssp HHTTCSEEEECCCCC
T ss_pred HHcCCCEEEECCCCC
Confidence 999999987666543
No 467
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=54.57 E-value=31 Score=33.35 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=51.2
Q ss_pred CceEEEEecC-----CCCCCC--CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHh---CCCc-c
Q psy10250 201 DVKVASVAAG-----FPSGQY--LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC---GEKI-H 269 (387)
Q Consensus 201 ~v~v~tVvig-----FP~G~~--~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~---~~~~-~ 269 (387)
...|-.+ ++ |=.|.. ..+.-+..+++.+++|||=||+-.--.. -|..-...+|++++.... .... -
T Consensus 41 ~~~vMGI-lNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTr--PG~~v~~~eEl~Rv~pvI~~l~~~~~~ 117 (318)
T 2vp8_A 41 RALIMAI-VNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAG--PGERVDVDTEITRLVPFIEWLRGAYPD 117 (318)
T ss_dssp SCEEEEE-EC--------------CHHHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTT
T ss_pred CcEEEEE-EeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCC--CCCCCCHHHHHHHHHHHHHHHHhhCCC
Confidence 3456666 34 333332 3567778899999999999998742111 122223466766663332 2101 2
Q ss_pred eEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCC
Q psy10250 270 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGK 306 (387)
Q Consensus 270 lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf 306 (387)
+-+-|.|. ..+ ..+.|+++|+|.|.--+|+
T Consensus 118 vpISIDT~---~~~----VaeaAl~aGa~iINDVsg~ 147 (318)
T 2vp8_A 118 QLISVDTW---RAQ----VAKAACAAGADLINDTWGG 147 (318)
T ss_dssp CEEEEECS---CHH----HHHHHHHHTCCEEEETTSS
T ss_pred CeEEEeCC---CHH----HHHHHHHhCCCEEEECCCC
Confidence 34455553 223 3455677799999988886
No 468
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=54.07 E-value=95 Score=27.61 Aligned_cols=95 Identities=11% Similarity=0.023 Sum_probs=55.4
Q ss_pred cHHHHHHHhhhcCCCCCc-eEEEEecCCCC--CCCC------HHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHH
Q psy10250 185 RVVDVIKVLDRENARDDV-KVASVAAGFPS--GQYL------LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFS 255 (387)
Q Consensus 185 ~v~~a~~~L~~~~~~~~v-~v~tVvigFP~--G~~~------~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~ 255 (387)
.+...++.++. .++ .++.- ..|+. +..+ .+.=...++.|.+.||.-+ |+..|.. |. +.+.+
T Consensus 50 ~~~~~~~~~~~----~gl~~~~~h-~~~~~~l~s~~~~r~~~~~~~~~~i~~a~~lGa~~v--v~h~g~~--~~-~~~~~ 119 (270)
T 3aam_A 50 EVEAFRALREA----SGGLPAVIH-ASYLVNLGAEGELWEKSVASLADDLEKAALLGVEYV--VVHPGSG--RP-ERVKE 119 (270)
T ss_dssp HHHHHHHHHHH----TTCCCEEEE-CCTTCCTTCSSTHHHHHHHHHHHHHHHHHHHTCCEE--EECCCBS--CH-HHHHH
T ss_pred HHHHHHHHHHH----cCCceEEEe-cCcccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE--EECCCCC--CH-HHHHH
Confidence 35566677765 567 55443 24432 2111 1112345667778899875 5555544 33 67777
Q ss_pred HHHHHHHHhC-CCcceEEEEeec-----cC-CChHHHHHHHH
Q psy10250 256 EVKQMKEKCG-EKIHMKTILAVG-----EL-KTSENIYCASM 290 (387)
Q Consensus 256 Ei~~v~~~~~-~~~~lKvIlEt~-----~L-~t~e~i~~a~~ 290 (387)
-++++.+.+. . .-+++.||+. .+ .+.+++.+.++
T Consensus 120 ~l~~l~~~a~~~-~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 160 (270)
T 3aam_A 120 GALKALRLAGVR-SRPVLLVENTAGGGEKVGARFEELAWLVA 160 (270)
T ss_dssp HHHHHHHHHTCC-SSSEEEEECCCCCTTBSCCSHHHHHHHHT
T ss_pred HHHHHHHhhccc-CCCEEEEecCCCCCCccCCCHHHHHHHHH
Confidence 7788877775 4 3589999996 13 25666655443
No 469
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=53.77 E-value=1.4e+02 Score=28.67 Aligned_cols=132 Identities=15% Similarity=0.100 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcC-ChhHHHHHHHHHHHHhCCCcceEEEEeec-----------cCCC-h-
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAVG-----------ELKT-S- 282 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g-~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-----------~L~t-~- 282 (387)
+.+.++. .+.+.|.+-|++..+- ..-.+ .......++.++++.+.. .-|++..=++ .|.+ +
T Consensus 34 ~~~e~l~---~aa~~G~~~VEl~~~~-~~p~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~~~~p~~~~g~l~~~d~ 108 (386)
T 1muw_A 34 DPVETVQ---RLAELGAHGVTFHDDD-LIPFGSSDTERESHIKRFRQALDA-TGMTVPMATTNLFTHPVFKDGGFTANDR 108 (386)
T ss_dssp CHHHHHH---HHHHHTCCEEEEEHHH-HSCTTCCHHHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGTTCSTTCSSH
T ss_pred CHHHHHH---HHHHcCCCEEEeeCCC-CCcccCcccccHHHHHHHHHHHHH-hCCeEEEEecccccccccccCCCCCCCH
Confidence 3555544 4445699999987521 00011 111113455555555543 1233322111 2322 2
Q ss_pred -------HHHHHHHHHHHHcCCCEEEcCCCCCCC----CCCh-hhhHhHHHHHHHHHHH---cC--CCceEeEec-----
Q psy10250 283 -------ENIYCASMTAMFAGSDFIKTSTGKEKT----NATI-PAGIIMCSAIKHFHKL---SG--KKIGLKPAG----- 340 (387)
Q Consensus 283 -------e~i~~a~~ia~~aGaDfVKTSTGf~~~----gat~-~~~~~m~~~v~~~~~~---~~--~~~gIKasG----- 340 (387)
+.+.++.++|.+.|+++|...+|+.+. ..+. +....+.+.++.+.+. .| -++.+-.-.
T Consensus 109 ~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~ 188 (386)
T 1muw_A 109 DVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRG 188 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCCcc
Confidence 345678889999999999998886321 2222 2334444555554433 34 456665543
Q ss_pred --cCCCHHHHHHHHH
Q psy10250 341 --GISTFEDSVRWIY 353 (387)
Q Consensus 341 --GIrt~~~a~~~i~ 353 (387)
-+.|.+++..++.
T Consensus 189 ~~~~~t~~~~~~li~ 203 (386)
T 1muw_A 189 DILLPTVGHALAFIE 203 (386)
T ss_dssp EESSCSHHHHHHHHT
T ss_pred cccCCCHHHHHHHHH
Confidence 3589999999995
No 470
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=53.77 E-value=1.4e+02 Score=27.81 Aligned_cols=135 Identities=12% Similarity=0.017 Sum_probs=79.6
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHH
Q psy10250 209 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 287 (387)
Q Consensus 209 igF-P~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~ 287 (387)
.=| +.|.-..+.=..-+++.++.|++-|=+.=.-|..-+=..++-.+=++.+++.+.+ ||.=++-.++ ++-.+
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-----viaGvg~~~t-~~ai~ 82 (293)
T 1w3i_A 9 TPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-----IIFQVGGLNL-DDAIR 82 (293)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-----EEEECCCSCH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-----EEEecCCCCH-HHHHH
Confidence 345 4577777777888999999999885433333333322333333333333333321 9999998866 44557
Q ss_pred HHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHH-----------------------HHHHcCCCceEeEeccCCC
Q psy10250 288 ASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKH-----------------------FHKLSGKKIGLKPAGGIST 344 (387)
Q Consensus 288 a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~-----------------------~~~~~~~~~gIKasGGIrt 344 (387)
.++.|.++|+|.+=-.+=|.....|.+.+..-+++|.. +.+ .++=+|||-|.| +
T Consensus 83 la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~-~pnIvgiKds~g--d 159 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE-IGCFTGVKDTIE--N 159 (293)
T ss_dssp HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH-HCCEEEEEECCS--C
T ss_pred HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh-cCCEEEEEeCCC--C
Confidence 78889999999886655442221344433322222222 224 567789999876 5
Q ss_pred HHHHHHHH
Q psy10250 345 FEDSVRWI 352 (387)
Q Consensus 345 ~~~a~~~i 352 (387)
..+..+++
T Consensus 160 ~~~~~~~~ 167 (293)
T 1w3i_A 160 IIHTLDYK 167 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56655555
No 471
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=53.77 E-value=1e+02 Score=29.17 Aligned_cols=90 Identities=11% Similarity=0.023 Sum_probs=61.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHH
Q psy10250 4 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTA 83 (387)
Q Consensus 4 ~G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a 83 (387)
.|.-..+.=..-+++.++.|++-|=+.=-.|-.-+=..++-.+=++.+++.+ + .+.||.=+|-.++.+ ..+.++.|
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~~t~~-ai~la~~A 98 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAPGFAA-MRRLARLS 98 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCSSHHH-HHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCCCHHH-HHHHHHHH
Confidence 3445556666778899999999862222233333334555556666677777 4 378999999886655 55677888
Q ss_pred HHcCCCEEecCCCC
Q psy10250 84 MFAGSDFIKTSTGK 97 (387)
Q Consensus 84 ~~ag~dfvKTSTG~ 97 (387)
.++|+|.+=-.+-|
T Consensus 99 ~~~Gadavlv~~P~ 112 (313)
T 3dz1_A 99 MDAGAAGVMIAPPP 112 (313)
T ss_dssp HHHTCSEEEECCCT
T ss_pred HHcCCCEEEECCCC
Confidence 99999998766655
No 472
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=53.73 E-value=1.4e+02 Score=27.60 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHCC-CCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCC---ChHHHHHHHHHHH
Q psy10250 218 LETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK---TSENIYCASMTAM 293 (387)
Q Consensus 218 ~e~K~~Ea~~Ai~~G-AdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~---t~e~i~~a~~ia~ 293 (387)
-+......+.+++.| +|-||+=+... +.+ ++++.+.++. ..+|||+-...+. +.+++..-..-+.
T Consensus 98 ~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~---~~~l~~~a~~-~~~kiI~S~Hdf~~TP~~~el~~~~~~~~ 166 (258)
T 4h3d_A 98 RDYYTTLNKEISNTGLVDLIDVELFMG-------DEV---IDEVVNFAHK-KEVKVIISNHDFNKTPKKEEIVSRLCRMQ 166 (258)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEGGGC-------HHH---HHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCchhhHHhhhcc-------HHH---HHHHHHHHHh-CCCEEEEEEecCCCCCCHHHHHHHHHHHH
Confidence 456677778888887 78888766543 222 3344444433 3589999886553 3466776667778
Q ss_pred HcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcC
Q psy10250 294 FAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSG 331 (387)
Q Consensus 294 ~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~ 331 (387)
+.|||.+|-.+ ..-+.+++..+++..+.+++...
T Consensus 167 ~~gaDIvKia~----~~~~~~D~l~Ll~~~~~~~~~~~ 200 (258)
T 4h3d_A 167 ELGADLPKIAV----MPQNEKDVLVLLEATNEMFKIYA 200 (258)
T ss_dssp HTTCSEEEEEE----CCSSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCCEEEEEE----ccCCHHHHHHHHHHHHHHHHhcC
Confidence 88999999655 23467777777777777766543
No 473
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=53.63 E-value=58 Score=33.25 Aligned_cols=67 Identities=21% Similarity=0.351 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEe
Q psy10250 13 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAMFAGSDFIK 92 (387)
Q Consensus 13 ~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~~ag~dfvK 92 (387)
...++.+++.|+|-|.+-.+ .|+...+.+-++++++..++ +.+|.=. ..+.+. ++.+.++|+|+|+
T Consensus 258 ~era~aLveaGvd~I~Id~a-----~g~~~~v~~~i~~i~~~~~~---~~vi~g~--v~t~e~----a~~~~~aGad~i~ 323 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTA-----HGHSQGVIDKVKEVRAKYPS---LNIIAGN--VATAEA----TKALIEAGANVVK 323 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECS-----CTTSHHHHHHHHHHHHHCTT---SEEEEEE--ECSHHH----HHHHHHHTCSEEE
T ss_pred HHHHHHHHhhccceEEeccc-----ccchhhhhhHHHHHHHhCCC---ceEEeee--eccHHH----HHHHHHhCCCEEE
Confidence 55678889999998666544 46788888888999876643 3555422 225443 5567889999999
Q ss_pred c
Q psy10250 93 T 93 (387)
Q Consensus 93 T 93 (387)
-
T Consensus 324 v 324 (511)
T 3usb_A 324 V 324 (511)
T ss_dssp E
T ss_pred E
Confidence 6
No 474
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=53.62 E-value=20 Score=35.71 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=42.3
Q ss_pred HHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe-ccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 287 CASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA-GGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 287 ~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas-GGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
..++.+.++|+|+|---|.++. ++. +.+.|+.+++. .++++. |++.|.++|..++ .+|+|.+.
T Consensus 147 e~~~~lveaGvdvIvldta~G~----~~~---~~e~I~~ik~~----~~i~Vi~g~V~t~e~A~~a~-----~aGAD~I~ 210 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGH----SLN---IIRTLKEIKSK----MNIDVIVGNVVTEEATKELI-----ENGADGIK 210 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCS----BHH---HHHHHHHHHTT----CCCEEEEEEECSHHHHHHHH-----HTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCC----ccc---HHHHHHHHHhc----CCCeEEEeecCCHHHHHHHH-----HcCCCEEE
Confidence 3467789999999975444431 111 12345555443 356654 7899999999999 59998764
Q ss_pred C
Q psy10250 366 K 366 (387)
Q Consensus 366 ~ 366 (387)
-
T Consensus 211 v 211 (400)
T 3ffs_A 211 V 211 (400)
T ss_dssp E
T ss_pred E
Confidence 3
No 475
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=53.56 E-value=1.7e+02 Score=28.55 Aligned_cols=145 Identities=11% Similarity=0.070 Sum_probs=90.3
Q ss_pred HHHHHHHHHHH-HHCCCCeeeeecCchhhhc--CChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHH
Q psy10250 218 LETRLHEIELL-AKQKVDEVDIVIQRSLVLN--NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 294 (387)
Q Consensus 218 ~e~K~~Ea~~A-i~~GAdEID~Vin~~~lk~--g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~ 294 (387)
.+....+++.. .+.|.+-+-+=+....-.+ ...+...+-+++|+++.++ -+.+.+....-=+.++-.+.++...+
T Consensus 147 ~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v~avReavG~--d~~l~vDaN~~~~~~~A~~~~~~l~~ 224 (388)
T 3tcs_A 147 PRDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRRELGD--DVDLLIDANSCYTPDRAIEVGHMLQD 224 (388)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHHHHHHHHHCS--SSEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHHHHHHHHhCC--CCeEEEeCCCCcCHHHHHHHHHHHhh
Confidence 44444444443 5789998876543211000 0123345668889998875 36777776443367777777888888
Q ss_pred cCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-
Q psy10250 295 AGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA- 373 (387)
Q Consensus 295 aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt- 373 (387)
.|.+|+--+.-. -.+ +..+.+++.+ .+.|=+-.-+.+..++..++. .-+++.++++..|+|.
T Consensus 225 ~~i~~iEeP~~~----~d~-------~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~----~~a~d~v~~d~~~~GGi 287 (388)
T 3tcs_A 225 HGFCHFEEPCPY----WEL-------AQTKQVTDAL--DIDVTGGEQDCDLPTWQRMID----MRAVDIVQPDILYLGGI 287 (388)
T ss_dssp TTCCEEECCSCT----TCH-------HHHHHHHHHC--SSCEEECTTCCCHHHHHHHHH----HTCCSEECCCHHHHTSH
T ss_pred cCCeEEECCCCc----cCH-------HHHHHHHHhc--CCCEEcCCccCCHHHHHHHHH----cCCCCEEEeCccccCCH
Confidence 999999865421 122 3455555553 344544445899999999985 3457888999999864
Q ss_pred cchHHHHH
Q psy10250 374 SSLLNNIL 381 (387)
Q Consensus 374 Ss~~~il~ 381 (387)
+.++++..
T Consensus 288 t~a~kia~ 295 (388)
T 3tcs_A 288 CRTLRVVE 295 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555544
No 476
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=53.31 E-value=1.8e+02 Score=28.86 Aligned_cols=148 Identities=8% Similarity=-0.052 Sum_probs=94.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCeeeeecCchh--------hh--------------------cCC-------hhHHHHHHHH
Q psy10250 215 QYLLETRLHEIELLAKQKVDEVDIVIQRSL--------VL--------------------NNQ-------WPELFSEVKQ 259 (387)
Q Consensus 215 ~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~--------lk--------------------~g~-------~~~v~~Ei~~ 259 (387)
..+.+.-+.+++.+++.|.+-+=+=+.... ++ .|. .+...+=+++
T Consensus 153 ~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~a 232 (440)
T 3t6c_A 153 GADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDH 232 (440)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 356788888999999999988765432110 00 000 1233444677
Q ss_pred HHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEe
Q psy10250 260 MKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPA 339 (387)
Q Consensus 260 v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKas 339 (387)
|+++.++ -+.+.+....--+.++-.+.++...+.|.+||--+.- +++. +..+.+++.+ .+.|=+-
T Consensus 233 vR~a~G~--d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~-------~~d~----~~~~~l~~~~--~iPIa~d 297 (440)
T 3t6c_A 233 LRNKLGF--SVELLHDAHERITPINAIHMAKALEPYQLFFLEDPVA-------PENT----EWLKMLRQQS--STPIAMG 297 (440)
T ss_dssp HHHHHCS--SSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSC-------GGGG----GGHHHHHHHC--CSCEEEC
T ss_pred HHHhcCC--CCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCC-------hhhH----HHHHHHHhhc--CCCEEeC
Confidence 8888875 3567777643336677777777778889999985542 2222 2334455443 3566665
Q ss_pred ccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-cchHHHHH
Q psy10250 340 GGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 340 GGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-Ss~~~il~ 381 (387)
+-+.+..++..++. .-.++.++++..|+|. +.++++..
T Consensus 298 E~~~~~~~~~~~i~----~~a~d~v~~k~~~~GGit~~~~ia~ 336 (440)
T 3t6c_A 298 ELFVNVNEWKPLID----NKLIDYIRCHISSIGGITPAKKIAI 336 (440)
T ss_dssp TTCCSHHHHHHHHH----TTCCSEECCCGGGGTSHHHHHHHHH
T ss_pred cccCCHHHHHHHHH----cCCccceeechhhhCCHHHHHHHHH
Confidence 67899999999995 2347888999999964 55555544
No 477
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=53.10 E-value=37 Score=32.76 Aligned_cols=75 Identities=11% Similarity=0.193 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC--CceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~--~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
+.++..++++.+.+.|.+.||--.|.. +++.. ++-|+.+++.+|. .+.|++-||- |.++|+.++...+ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~----~~~~~---~e~v~avr~a~G~d~~l~vDan~~~-~~~~a~~~~~~l~-~ 216 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP----DLKED---VDRVSALREHLGDSFPLMVDANMKW-TVDGAIRAARALA-P 216 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS----SHHHH---HHHHHHHHHHHCTTSCEEEECTTCS-CHHHHHHHHHHHG-G
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC----CHHHH---HHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHHH-h
Confidence 567788888888899999999765531 34322 3455666777765 5778888886 6899999987644 4
Q ss_pred cCCCcc
Q psy10250 359 LGPDWL 364 (387)
Q Consensus 359 ~Ga~w~ 364 (387)
+|.+|+
T Consensus 217 ~~i~~i 222 (371)
T 2ovl_A 217 FDLHWI 222 (371)
T ss_dssp GCCSEE
T ss_pred cCCCEE
Confidence 799888
No 478
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=52.99 E-value=18 Score=34.83 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=55.1
Q ss_pred ChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcC--CCEEEcCCCCCCCCCChhhhHhHHHHHHHH
Q psy10250 249 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG--SDFIKTSTGKEKTNATIPAGIIMCSAIKHF 326 (387)
Q Consensus 249 ~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aG--aDfVKTSTGf~~~gat~~~~~~m~~~v~~~ 326 (387)
+.+...+.++++.+. + .++- +..+. .++.. +.++.+.++| +|+|--.++.+ .++ ...+.|+.+
T Consensus 79 ~~~~~~~~i~~~~~~--g-~~v~--v~~g~--~~~~~-~~a~~~~~~g~~~~~i~i~~~~G----~~~---~~~~~i~~l 143 (336)
T 1ypf_A 79 QPEKRISFIRDMQSR--G-LIAS--ISVGV--KEDEY-EFVQQLAAEHLTPEYITIDIAHG----HSN---AVINMIQHI 143 (336)
T ss_dssp SGGGHHHHHHHHHHT--T-CCCE--EEECC--SHHHH-HHHHHHHHTTCCCSEEEEECSSC----CSH---HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc--C-CeEE--EeCCC--CHHHH-HHHHHHHhcCCCCCEEEEECCCC----CcH---HHHHHHHHH
Confidence 444555556665531 2 2332 22222 23333 4567788999 99975333221 122 223567777
Q ss_pred HHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 327 HKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 327 ~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
++.++..+-+| |+|.+.++|..+. .+|++.+
T Consensus 144 r~~~~~~~vi~--G~v~s~e~A~~a~-----~aGad~I 174 (336)
T 1ypf_A 144 KKHLPESFVIA--GNVGTPEAVRELE-----NAGADAT 174 (336)
T ss_dssp HHHCTTSEEEE--EEECSHHHHHHHH-----HHTCSEE
T ss_pred HHhCCCCEEEE--CCcCCHHHHHHHH-----HcCCCEE
Confidence 87776544443 5699999999999 5899865
No 479
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=52.94 E-value=63 Score=28.84 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=67.3
Q ss_pred HHHHHHHCCCCeeeeecCch-hhhcCChhHHHHHHHHHHHHhCCCcce-EEEEeeccC---CC--------hHHHHHHHH
Q psy10250 224 EIELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHM-KTILAVGEL---KT--------SENIYCASM 290 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~-~lk~g~~~~v~~Ei~~v~~~~~~~~~l-KvIlEt~~L---~t--------~e~i~~a~~ 290 (387)
-++.+.+.|.+-|++...-. .+....+. .++++++++.+.. .-+ .+.+-.++. .+ .+.+.++.+
T Consensus 19 ~~~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~ 95 (270)
T 3aam_A 19 AVEEATALGLTAFQIFAKSPRSWRPRALS--PAEVEAFRALREA-SGGLPAVIHASYLVNLGAEGELWEKSVASLADDLE 95 (270)
T ss_dssp HHHHHHHHTCSCEEEESSCTTCCSCCCCC--HHHHHHHHHHHHH-TTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCCcCcCCCCC--HHHHHHHHHHHHH-cCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHH
Confidence 35667788999998844221 11111221 2455555555532 113 334434432 11 133566788
Q ss_pred HHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHc----CCCceEeEecc----C-CCHHHHHHHHH
Q psy10250 291 TAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLS----GKKIGLKPAGG----I-STFEDSVRWIY 353 (387)
Q Consensus 291 ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~----~~~~gIKasGG----I-rt~~~a~~~i~ 353 (387)
+|.+.|+.+|.+.+|+. + . ..+.+.++.+.+.. +-++.|-.-.| + .|++++..+++
T Consensus 96 ~a~~lGa~~vv~h~g~~--~--~---~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 160 (270)
T 3aam_A 96 KAALLGVEYVVVHPGSG--R--P---ERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVA 160 (270)
T ss_dssp HHHHHTCCEEEECCCBS--C--H---HHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHT
T ss_pred HHHHcCCCEEEECCCCC--C--H---HHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHH
Confidence 89999999999998874 2 1 34445555555554 23444444422 3 48999999985
No 480
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=52.65 E-value=94 Score=30.80 Aligned_cols=146 Identities=8% Similarity=0.010 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhh-------c----------C------Ch------hHHHHHHHHHHHHhCC
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVL-------N----------N------QW------PELFSEVKQMKEKCGE 266 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk-------~----------g------~~------~~v~~Ei~~v~~~~~~ 266 (387)
.+.+.-..+++.+++.|.+-+=+=+....+. . + .| +...+=+++|++++++
T Consensus 148 ~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G~ 227 (426)
T 4e4f_A 148 HSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFGF 227 (426)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 4567777888999999988765432211100 0 0 01 1233557888998876
Q ss_pred CcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHH
Q psy10250 267 KIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFE 346 (387)
Q Consensus 267 ~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~ 346 (387)
. +.+++....--+.++-.+.++...+.|.+||--+.-- -.++ ..+.+++. -.+.|-+-+.+.+..
T Consensus 228 d--~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~----~d~~-------~~~~l~~~--~~iPIa~dE~~~~~~ 292 (426)
T 4e4f_A 228 N--EHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPTPA----ENQA-------CFRLIRQH--TVTPIAVGEVFNSIW 292 (426)
T ss_dssp S--SEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCSCC----SSGG-------GGHHHHTT--CCSCEEECTTCCSGG
T ss_pred C--CEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCCh----HHHH-------HHHHHHhc--CCCCEEeCCCcCCHH
Confidence 3 4566665433367777777888888999999865421 1121 22333332 245666666789999
Q ss_pred HHHHHHHHHHHhcC-CCccCCCcceeec-cchHHHHH
Q psy10250 347 DSVRWIYLVLIMLG-PDWLNKDLFRIGA-SSLLNNIL 381 (387)
Q Consensus 347 ~a~~~i~l~~~~~G-a~w~~~~~~RIGt-Ss~~~il~ 381 (387)
++..++. .| ++.++++..|+|. +.++++..
T Consensus 293 ~~~~~i~-----~ga~d~v~~k~~~~GGit~~~~ia~ 324 (426)
T 4e4f_A 293 DCKQLIE-----EQLIDYIRTTITHAGGITGMRRIAD 324 (426)
T ss_dssp GTHHHHH-----TTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred HHHHHHH-----cCCCCEEEeCccccCCHHHHHHHHH
Confidence 9999994 44 6778899999864 55555544
No 481
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=52.62 E-value=1e+02 Score=28.09 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHC-CCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC---CChHHHHHHHHHH
Q psy10250 217 LLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSENIYCASMTA 292 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~-GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L---~t~e~i~~a~~ia 292 (387)
+.+....-.+.+++. |++-||+=++.. .. .+.++++.+..+. ...|||+-...+ .+.+++..-..-+
T Consensus 81 ~~~~~~~ll~~~~~~~~~d~iDvEl~~~-----~~---~~~~~~l~~~~~~-~~~kvI~S~Hdf~~tp~~~el~~~~~~~ 151 (238)
T 1sfl_A 81 TNDSYLNLISDLANINGIDMIDIEWQAD-----ID---IEKHQRIITHLQQ-YNKEVIISHHNFESTPPLDELQFIFFKM 151 (238)
T ss_dssp CHHHHHHHHHHGGGCTTCCEEEEECCTT-----SC---HHHHHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEccCC-----CC---hHHHHHHHHHHHh-cCCEEEEEecCCCCCcCHHHHHHHHHHH
Confidence 456677778888887 699999866431 01 1334445554433 357999987653 2347777777778
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHH
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHF 326 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~ 326 (387)
...|||.+|=.+ ..-+.+++..+++....+
T Consensus 152 ~~~gaDivKia~----~a~~~~D~l~ll~~~~~~ 181 (238)
T 1sfl_A 152 QKFNPEYVKLAV----MPHNKNDVLNLLQAMSTF 181 (238)
T ss_dssp HTTCCSEEEEEE----CCSSHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEe----cCCCHHHHHHHHHHHHHH
Confidence 889999999654 234577777776666555
No 482
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=52.58 E-value=55 Score=30.22 Aligned_cols=85 Identities=18% Similarity=0.085 Sum_probs=51.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeecCch---------------hhhcCC-hhHHHHHHHHHHHHhCCCcceEEEEee
Q psy10250 213 SGQYLLETRLHEIELLAKQKVDEVDIVIQRS---------------LVLNNQ-WPELFSEVKQMKEKCGEKIHMKTILAV 276 (387)
Q Consensus 213 ~G~~~~e~K~~Ea~~Ai~~GAdEID~Vin~~---------------~lk~g~-~~~v~~Ei~~v~~~~~~~~~lKvIlEt 276 (387)
.|.-..+.....++...+.|||-|.+=++++ ++..|- .+...+-++++++...+ .+ +++-
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~-~P--v~lm- 100 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT-IP--IGLL- 100 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS-SC--EEEE-
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC-CC--EEEE-
Confidence 5555567777788888888999877766553 233332 35556778888876222 33 4442
Q ss_pred ccCCChH---HHHHHHHHHHHcCCCEEEc
Q psy10250 277 GELKTSE---NIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 277 ~~L~t~e---~i~~a~~ia~~aGaDfVKT 302 (387)
.|. ++- -..+-++.+.++|+|.|=.
T Consensus 101 ~y~-n~v~~~g~~~~~~~~~~aGadgii~ 128 (268)
T 1qop_A 101 MYA-NLVFNNGIDAFYARCEQVGVDSVLV 128 (268)
T ss_dssp ECH-HHHHTTCHHHHHHHHHHHTCCEEEE
T ss_pred Ecc-cHHHHhhHHHHHHHHHHcCCCEEEE
Confidence 233 110 1245677788999996543
No 483
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=52.37 E-value=51 Score=32.11 Aligned_cols=76 Identities=12% Similarity=0.137 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCC--CceEeEeccCCCHHHHHHHHHHHHHh
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIM 358 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~--~~gIKasGGIrt~~~a~~~i~l~~~~ 358 (387)
+.++..++++.+.++|.+.||--.|+. .++ ..++-|+.+++.+|. .+.|++-||- |.++|+.++...+ .
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~----~~~---~~~e~v~avR~a~G~d~~l~vDan~~~-~~~~a~~~~~~l~-~ 219 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLD----SLS---ISIQFVEKVREIVGDELPLMLDLAVPE-DLDQTKSFLKEVS-S 219 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCS----SHH---HHHHHHHHHHHHHCSSSCEEEECCCCS-CHHHHHHHHHHHG-G
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCC----hHH---HHHHHHHHHHHHhCCCCEEEEEcCCCC-CHHHHHHHHHHHH-h
Confidence 678888888888999999999766642 122 233456666777765 5778888775 6899999987644 4
Q ss_pred cCCCccC
Q psy10250 359 LGPDWLN 365 (387)
Q Consensus 359 ~Ga~w~~ 365 (387)
+|.+|+.
T Consensus 220 ~~i~~iE 226 (391)
T 2qgy_A 220 FNPYWIE 226 (391)
T ss_dssp GCCSEEE
T ss_pred cCCCeEe
Confidence 7999983
No 484
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=52.16 E-value=1.3e+02 Score=26.91 Aligned_cols=123 Identities=13% Similarity=0.057 Sum_probs=67.9
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeecc-----CCC-h--------HHHHHHH
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE-----LKT-S--------ENIYCAS 289 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~-----L~t-~--------e~i~~a~ 289 (387)
..+.+.+.|.+-|++.... +. ++ -..+++++++.+.. .-+++..=.+. |.+ + +.+.++.
T Consensus 22 ~l~~~~~~G~~~vEl~~~~--~~--~~--~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i 94 (294)
T 3vni_A 22 YIEKVAKLGFDILEIAASP--LP--FY--SDIQINELKACAHG-NGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLL 94 (294)
T ss_dssp HHHHHHHHTCSEEEEESTT--GG--GC--CHHHHHHHHHHHHH-TTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCcc--cC--Cc--CHHHHHHHHHHHHH-cCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 3455667899999998653 11 11 13445555555433 22454431111 211 2 3355678
Q ss_pred HHHHHcCCCEEEc--CCCCC---CCCCCh-hhhHhHHHHHHHHHH---HcCCCceEeEecc-----CCCHHHHHHHHH
Q psy10250 290 MTAMFAGSDFIKT--STGKE---KTNATI-PAGIIMCSAIKHFHK---LSGKKIGLKPAGG-----ISTFEDSVRWIY 353 (387)
Q Consensus 290 ~ia~~aGaDfVKT--STGf~---~~gat~-~~~~~m~~~v~~~~~---~~~~~~gIKasGG-----Irt~~~a~~~i~ 353 (387)
++|.+.|+++|.+ .+|++ ..+.+. +....+.+.++.+.+ ..|-++.+-.-++ +.|.+++..++.
T Consensus 95 ~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 172 (294)
T 3vni_A 95 KRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVK 172 (294)
T ss_dssp HHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHH
Confidence 8999999999984 34553 112222 233334444444433 3355666666532 578999999996
No 485
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=52.13 E-value=1.2e+02 Score=31.00 Aligned_cols=173 Identities=13% Similarity=0.050 Sum_probs=100.9
Q ss_pred CCCCCHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHH
Q psy10250 140 SGDDTEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLE 219 (387)
Q Consensus 140 ~~~~T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e 219 (387)
....|.+|+.++-+.. ..++++|+....+.+.|+. ..+++... .++|.|-..|+
T Consensus 273 ~ggtt~~ei~~~~~A~---------------------~niv~~~~~~~~~A~~Le~---~~GiP~i~--~~~PiG~~~T~ 326 (523)
T 3u7q_B 273 AGGTTQEEMKDAPNAL---------------------NTVLLQPWHLEKTKKFVEG---TWKHEVPK--LNIPMGLDWTD 326 (523)
T ss_dssp CCCBCHHHHHHGGGSS---------------------EEEESSGGGCHHHHHHHHH---TSCCCCCC--CCCSCHHHHHH
T ss_pred CCCCCHHHHHHhhcCc---------------------EEEEEccchHHHHHHHHHH---HhCCCeee--cCCcCCHHHHH
Confidence 3566889987663322 4688899877778888875 25666532 38999998888
Q ss_pred HHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHH-------hCCCcceEEEEeeccCCChHHHHHHHHHH
Q psy10250 220 TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEK-------CGEKIHMKTILAVGELKTSENIYCASMTA 292 (387)
Q Consensus 220 ~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~-------~~~~~~lKvIlEt~~L~t~e~i~~a~~ia 292 (387)
.=+.++.+.. |.+ + . +.+.+|-.++.++ .++ -||.|=. +.....-.++..
T Consensus 327 ~~l~~la~~~--g~~-~------~-------~~i~~er~r~~~~l~d~~~~l~G---KrvaI~g----d~~~~~~la~fL 383 (523)
T 3u7q_B 327 EFLMKVSEIS--GQP-I------P-------ASLTKERGRLVDMMTDSHTWLHG---KRFALWG----DPDFVMGLVKFL 383 (523)
T ss_dssp HHHHHHHHHH--CCC-C------C-------HHHHHHHHHHHHHHHHHHHHHTT---CEEEEEC----SHHHHHHHHHHH
T ss_pred HHHHHHHHHH--CCC-h------h-------HHHHHHHHHHHHHHHHHHHhcCC---CEEEEEC----CchHHHHHHHHH
Confidence 8777776665 322 1 1 2233333333332 333 3666632 334455566777
Q ss_pred HHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceee
Q psy10250 293 MFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 372 (387)
Q Consensus 293 ~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIG 372 (387)
.+.|..=+-..|++.. .+.. +.++.+.+..+...+.++.-| .++.+..+++. ..++| .-||
T Consensus 384 ~elGm~vv~v~~~~~~----~~~~----~~~~~~l~~~~~~~~~~v~~~-~D~~~l~~~i~----~~~pD------Llig 444 (523)
T 3u7q_B 384 LELGCEPVHILCHNGN----KRWK----KAVDAILAASPYGKNATVYIG-KDLWHLRSLVF----TDKPD------FMIG 444 (523)
T ss_dssp HHTTCEEEEEEETTCC----HHHH----HHHHHHHHTSGGGTTCEEEES-CCHHHHHHHHH----HTCCS------EEEE
T ss_pred HHcCCEEEEEEeCCCC----HHHH----HHHHHHHhhccCCCCcEEEEC-CCHHHHHHHHH----hcCCC------EEEE
Confidence 7999998888887632 2221 233333322221122233222 36777777774 56776 6788
Q ss_pred ccchHHHH
Q psy10250 373 ASSLLNNI 380 (387)
Q Consensus 373 tSs~~~il 380 (387)
.|....+-
T Consensus 445 ~s~~k~~a 452 (523)
T 3u7q_B 445 NSYGKFIQ 452 (523)
T ss_dssp CTTHHHHH
T ss_pred CccHHHHH
Confidence 88765543
No 486
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=51.99 E-value=96 Score=29.20 Aligned_cols=197 Identities=12% Similarity=0.052 Sum_probs=112.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|..-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ ..+.++.|.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~-ai~la~~A~ 104 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSNNTHA-SIDLTKKAT 104 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCCCHHH-HHHHHHHHH
Confidence 44455556677889999999885443334444333456666666667776665 368999999875544 556778889
Q ss_pred HcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHhc
Q psy10250 85 FAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKAI 156 (387)
Q Consensus 85 ~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A~ 156 (387)
++|+|.+=-.+=|.... ++ +.-..++++++.-.|.-+ -.-+.+.+.+.+|.+ .
T Consensus 105 ~~Gadavlv~~P~y~~~----------------s~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~--~ 165 (301)
T 1xky_A 105 EVGVDAVMLVAPYYNKP----------------SQ-EGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE--I 165 (301)
T ss_dssp HTTCSEEEEECCCSSCC----------------CH-HHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT--S
T ss_pred hcCCCEEEEcCCCCCCC----------------CH-HHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc--C
Confidence 99999986655543221 11 222234444444333221 123567888888852 2
Q ss_pred CCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCee
Q psy10250 157 QPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEV 236 (387)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEI 236 (387)
-++.+|=-...-+....+++... +.++.| . .| .... +-.++..|++-.
T Consensus 166 -----------------pnIvgiKdssgd~~~~~~~~~~~--~~~f~v--~-~G----~d~~------~l~~l~~G~~G~ 213 (301)
T 1xky_A 166 -----------------ENIVAIKDAGGDVLTMTEIIEKT--ADDFAV--Y-SG----DDGL------TLPAMAVGAKGI 213 (301)
T ss_dssp -----------------TTEEEEEECSSCHHHHHHHHHHS--CTTCEE--E-ES----SGGG------HHHHHHTTCCEE
T ss_pred -----------------CCEEEEEcCCCCHHHHHHHHHhc--CCCeEE--E-EC----cHHH------HHHHHHcCCCEE
Confidence 25666665555566666655432 123333 3 23 2221 334567888764
Q ss_pred -eeecCc---------hhhhcCChhHHHH
Q psy10250 237 -DIVIQR---------SLVLNNQWPELFS 255 (387)
Q Consensus 237 -D~Vin~---------~~lk~g~~~~v~~ 255 (387)
-..-|+ .++++||++..++
T Consensus 214 is~~an~~P~~~~~l~~a~~~Gd~~~A~~ 242 (301)
T 1xky_A 214 VSVASHVIGNEMQEMIAAFQAGEFKKAQK 242 (301)
T ss_dssp EESTHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred EcCHHHhCHHHHHHHHHHHHCCCHHHHHH
Confidence 222332 5556777766553
No 487
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=51.83 E-value=32 Score=33.50 Aligned_cols=85 Identities=5% Similarity=-0.040 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCCeeeeecchhHHh-----------cC--------ChhHHHHHHHHHHHHccc-CccEEEEEec---
Q psy10250 11 TRLHEIELLAKQKVDEVDIVIQRSLVL-----------NN--------QWPELFSEVKQMKEKCEE-KIHMKTILAV--- 67 (387)
Q Consensus 11 ~K~~E~~~a~~~GA~EiD~Vin~~~lk-----------~g--------~~~~v~~ei~~v~~~~~~-~~~~KvIlEt--- 67 (387)
.=+.-|+.|.+.|+|-|++=.--|+|. .. +...+.+=+++|+++++. .+.+|+=...
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 334557788899999999854333222 11 123455556777777754 2334443311
Q ss_pred ---cCCCCHHHHHHHHHHHHHcCCCEEecCCC
Q psy10250 68 ---GELKTSENIYYASMTAMFAGSDFIKTSTG 96 (387)
Q Consensus 68 ---~~L~~~e~i~~a~~~a~~ag~dfvKTSTG 96 (387)
+-. +.++....++.+.++|+|||--|.|
T Consensus 242 ~~~~~~-~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 242 GTVDAD-PILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp SCCCSS-HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 111 4466777888889999999998876
No 488
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=51.80 E-value=52 Score=32.23 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEcCC----CC-----CCCCCChhhhHhHHHHHHHHHHHcCCC--ceEeEeccCCCHHHHH
Q psy10250 281 TSENIYCASMTAMFAGSDFIKTST----GK-----EKTNATIPAGIIMCSAIKHFHKLSGKK--IGLKPAGGISTFEDSV 349 (387)
Q Consensus 281 t~e~i~~a~~ia~~aGaDfVKTST----Gf-----~~~gat~~~~~~m~~~v~~~~~~~~~~--~gIKasGGIrt~~~a~ 349 (387)
+.++..+.++.+.+.|-+.||--- |+ +.+-.+.......++-|+.+++.+|.. +.|.+-||. |.++|+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~-~~~~a~ 227 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRF-DIPSSI 227 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCC-CHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHH
Confidence 345566666667777777777543 43 111111123344446667777778764 667777776 789999
Q ss_pred HHHHHHHHhcCCCcc
Q psy10250 350 RWIYLVLIMLGPDWL 364 (387)
Q Consensus 350 ~~i~l~~~~~Ga~w~ 364 (387)
.++...+ .+|.+|+
T Consensus 228 ~~~~~l~-~~~i~~i 241 (410)
T 2qq6_A 228 RFARAME-PFGLLWL 241 (410)
T ss_dssp HHHHHHG-GGCCSEE
T ss_pred HHHHHHh-hcCCCeE
Confidence 9987644 4688888
No 489
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=51.71 E-value=1e+02 Score=30.11 Aligned_cols=91 Identities=13% Similarity=0.042 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|-.-+=..++-.+-++.+++.+.+ .+.||.=+|-.++ ++-.+.++.|.
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st-~eai~la~~A~ 151 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNTGSNST-REAIHATEQGF 151 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCH-HHHHHHHHHHH
Confidence 44455566667889999999885332233333333345555556666666654 3789999998755 44556778889
Q ss_pred HcCCCEEecCCCCC
Q psy10250 85 FAGSDFIKTSTGKE 98 (387)
Q Consensus 85 ~ag~dfvKTSTG~~ 98 (387)
++|+|.+=-.+=|.
T Consensus 152 ~~Gadavlvv~PyY 165 (360)
T 4dpp_A 152 AVGMHAALHINPYY 165 (360)
T ss_dssp HTTCSEEEEECCCS
T ss_pred HcCCCEEEEcCCCC
Confidence 99999987666554
No 490
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=51.65 E-value=77 Score=27.93 Aligned_cols=118 Identities=8% Similarity=0.088 Sum_probs=69.5
Q ss_pred HHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccC----CC-h--------HHHHHHHH
Q psy10250 224 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL----KT-S--------ENIYCASM 290 (387)
Q Consensus 224 Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L----~t-~--------e~i~~a~~ 290 (387)
.++.+.+.|.+ |++..+...+ +... +++++++..+ + .+ .+-.+++ .+ + +.+.++.+
T Consensus 15 ~l~~~~~~G~~-vEl~~~~~~~---~~~~---~~~~~~~~~~-~-~~--~~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~ 83 (254)
T 3ayv_A 15 ALPRLQALGLG-AEVYLDPALL---EEDA---LFQSLRRRFS-G-KL--SVHLPFWNLDLLSPDPEVRGLTLRRLLFGLD 83 (254)
T ss_dssp HHHHHHHHTCE-EEEECCGGGT---TCHH---HHHHHHHHCC-S-CE--EEECCCTTCCTTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC-EEEecccccc---CcHH---HHHHHHHHhC-C-Ce--EEecCccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 34666678999 9985553311 1111 6777777664 2 23 2333332 12 1 34567888
Q ss_pred HHHHcCCCEEEcCCCCCCCCC---ChhhhHhHHHHHHHHHH---HcCCCceEeEeccCCCHHHHHHHHH
Q psy10250 291 TAMFAGSDFIKTSTGKEKTNA---TIPAGIIMCSAIKHFHK---LSGKKIGLKPAGGISTFEDSVRWIY 353 (387)
Q Consensus 291 ia~~aGaDfVKTSTGf~~~ga---t~~~~~~m~~~v~~~~~---~~~~~~gIKasGGIrt~~~a~~~i~ 353 (387)
.|...|+++|...+|+.+... ..+....+.+.++.+.+ ..|-++.+-.-++ .|.+++..+++
T Consensus 84 ~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~-~~~~~~~~l~~ 151 (254)
T 3ayv_A 84 RAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHE-PHPEALRPVLE 151 (254)
T ss_dssp HHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSC-SSGGGTHHHHH
T ss_pred HHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCC-CCHHHHHHHHH
Confidence 999999999999888765331 11223334444444333 3355677766555 38888888886
No 491
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=51.29 E-value=91 Score=35.22 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHhcCCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCC---C-----CC
Q psy10250 144 TEAVVETLTLKAIQPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFP---S-----GQ 215 (387)
Q Consensus 144 T~~~i~~l~~~A~~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP---~-----G~ 215 (387)
..+-+++.++.|.. .....-.|+.+.+++...+...+... ..+-.+... +.|= + ..
T Consensus 625 pd~v~~~~v~~a~~--------------~Gvd~irif~~~sd~~~~~~~~~~~~-e~g~~~~~~-i~~~~~~~~pe~~~~ 688 (1150)
T 3hbl_A 625 PDNVIHKFVQESAK--------------AGIDVFRIFDSLNWVDQMKVANEAVQ-EAGKISEGT-ICYTGDILNPERSNI 688 (1150)
T ss_dssp CHHHHHHHHHHHHH--------------TTCCEEEEECTTCCGGGGHHHHHHHH-HTTCEEEEE-EECCSCTTCTTTCSS
T ss_pred CchhHHHHHHHHHh--------------CCcCEEEEEeeCCHHHHHHHHHHHHH-HHhhheeEE-EeecccccChhhcCC
Confidence 34556777787771 13445556666666655443332110 123333333 3443 1 23
Q ss_pred CCHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHc
Q psy10250 216 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 295 (387)
Q Consensus 216 ~~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~a 295 (387)
++.+.=+.-++.+.+.||+.|-+.=-.|.+ ....+++-++.+++.. .+.|+...=+|.-.-...+..|+++
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~---~P~~~~~lv~~l~~~~------~~~i~~H~Hnt~G~a~An~laA~~a 759 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGLL---KPKAAYELIGELKSAV------DLPIHLHTHDTSGNGLLTYKQAIDA 759 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHC------CSCEEEEECBTTSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCCC---CHHHHHHHHHHHHHhc------CCeEEEEeCCCCcHHHHHHHHHHHh
Confidence 556666777889999999998555334443 4677888888888764 2234444443433333456779999
Q ss_pred CCCEEEcCC-CCC--CCCCChh
Q psy10250 296 GSDFIKTST-GKE--KTNATIP 314 (387)
Q Consensus 296 GaDfVKTST-Gf~--~~gat~~ 314 (387)
|+|.|-|+- |+| ++++.++
T Consensus 760 Ga~~vD~ai~GlG~~~gn~~lE 781 (1150)
T 3hbl_A 760 GVDIIDTAVASMSGLTSQPSAN 781 (1150)
T ss_dssp TCSEEEEBCGGGCSBTSCCBHH
T ss_pred CCCEEEEeccccCCCCCCccHH
Confidence 999999976 443 3445554
No 492
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=51.21 E-value=94 Score=29.43 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|-.-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ -.+.++.|.
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~-ai~la~~A~ 100 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYSTQV-CAARSLRAQ 100 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchHHH-HHHHHHHHH
Confidence 45555666677889999999885333333433333445555556666666654 378999999886655 556778889
Q ss_pred HcCCCEEecCCCCC
Q psy10250 85 FAGSDFIKTSTGKE 98 (387)
Q Consensus 85 ~ag~dfvKTSTG~~ 98 (387)
++|+|.+=-.+-|.
T Consensus 101 ~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 101 QLGAAMVMAMPPYH 114 (309)
T ss_dssp HTTCSEEEECCSCB
T ss_pred HcCCCEEEEcCCCC
Confidence 99999987766653
No 493
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=51.12 E-value=1.2e+02 Score=28.29 Aligned_cols=110 Identities=10% Similarity=0.090 Sum_probs=64.3
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEEc
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 302 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVKT 302 (387)
.-++.+.+.||+-|=++-+-+++. |.. +.++++++.+.-+...| . +.-++.++. .|..+|||.|=-
T Consensus 76 ~~A~~y~~~GA~~isvltd~~~f~-Gs~----~~l~~ir~~v~lPvl~k----d-fiid~~qv~----~A~~~GAD~VlL 141 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQRRFQ-GSL----DDLDAVRASVSIPVLRK----D-FVVQPYQIH----EARAHGADMLLL 141 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGGGHH-HHH----HHHHHHHHHCSSCEEEE----S-CCCSHHHHH----HHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEecChhhcC-CCH----HHHHHHHHhCCCCEEEC----c-cccCHHHHH----HHHHcCCCEEEE
Confidence 345666778999998776665543 333 46777777665333333 2 343555564 455799999975
Q ss_pred CCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCc
Q psy10250 303 STGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 363 (387)
Q Consensus 303 STGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w 363 (387)
...-. +.+ .++.+.+.. .+.|+.+--.++|.+++...+ .+|+++
T Consensus 142 i~a~l----~~~-------~l~~l~~~a-~~lGl~~lvev~t~ee~~~A~-----~~Gad~ 185 (272)
T 3qja_A 142 IVAAL----EQS-------VLVSMLDRT-ESLGMTALVEVHTEQEADRAL-----KAGAKV 185 (272)
T ss_dssp EGGGS----CHH-------HHHHHHHHH-HHTTCEEEEEESSHHHHHHHH-----HHTCSE
T ss_pred ecccC----CHH-------HHHHHHHHH-HHCCCcEEEEcCCHHHHHHHH-----HCCCCE
Confidence 33211 122 222222222 124566656789999987766 479853
No 494
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=50.62 E-value=1e+02 Score=28.84 Aligned_cols=204 Identities=13% Similarity=0.054 Sum_probs=113.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeeeeecchhHHhcCChhHHHHHHHHHHHHcccCccEEEEEeccCCCCHHHHHHHHHHHH
Q psy10250 5 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCEEKIHMKTILAVGELKTSENIYYASMTAM 84 (387)
Q Consensus 5 G~~~~~~K~~E~~~a~~~GA~EiD~Vin~~~lk~g~~~~v~~ei~~v~~~~~~~~~~KvIlEt~~L~~~e~i~~a~~~a~ 84 (387)
|.-..+.=..-+++.++.|++-|=+.=..|-.-+=..++-.+=++.+++.+.+ .+.||.=+|-.++.+ ..+.++.|.
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~-ai~la~~a~ 99 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNTVE-AIALSQAAE 99 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHH-HHHHHHHHH
Confidence 44455566667889999999985433334444333455555566666666655 378999999875544 556778889
Q ss_pred HcCCCEEecCCCCCCCCCCCcccccchhccccchhhhhhHHHHHHhhccccccc--------CCCCCCHHHHHHHHHHhc
Q psy10250 85 FAGSDFIKTSTGKEKTNATIPADLTRQFEAVDLSRLKNKKSLLLKIIEFIDLTT--------LSGDDTEAVVETLTLKAI 156 (387)
Q Consensus 85 ~ag~dfvKTSTG~~~~gat~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ID~T~--------L~~~~T~~~i~~l~~~A~ 156 (387)
++|+|.+=-.+-|... .+ + +.-..+++.++...|.-+ -.-+.+.+.+.++.+ .
T Consensus 100 ~~Gadavlv~~P~y~~-~~---------------~-~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~--~ 160 (297)
T 3flu_A 100 KAGADYTLSVVPYYNK-PS---------------Q-EGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE--I 160 (297)
T ss_dssp HTTCSEEEEECCCSSC-CC---------------H-HHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT--S
T ss_pred HcCCCEEEECCCCCCC-CC---------------H-HHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc--C
Confidence 9999998765554322 11 1 112223334444333321 133567777777741 2
Q ss_pred CCCcHHHHHHHhhhccCCCeEEEEECCccHHHHHHHhhhcCCCCCceEEEEecCCCCCCCCHHHHHHHHHHHHHCCCCee
Q psy10250 157 QPLSEELKEKVLHQQANVHTAAVCVYPARVVDVIKVLDRENARDDVKVASVAAGFPSGQYLLETRLHEIELLAKQKVDEV 236 (387)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~aVcV~P~~v~~a~~~L~~~~~~~~v~v~tVvigFP~G~~~~e~K~~Ea~~Ai~~GAdEI 236 (387)
-++.++=-...-+....+.+... +.++.| . .| .... +-.++..|++-.
T Consensus 161 -----------------pnivgiKdssgd~~~~~~~~~~~--~~~f~v--~-~G----~d~~------~l~~l~~G~~G~ 208 (297)
T 3flu_A 161 -----------------PNIVGVKEASGNIGSNIELINRA--PEGFVV--L-SG----DDHT------ALPFMLCGGHGV 208 (297)
T ss_dssp -----------------TTEEEEEECSCCHHHHHHHHHHS--CTTCEE--E-EC----CGGG------HHHHHHTTCCEE
T ss_pred -----------------CCEEEEEeCCCCHHHHHHHHHhc--CCCeEE--E-EC----cHHH------HHHHHhCCCCEE
Confidence 25666666655566665555432 123333 3 13 2221 334667888775
Q ss_pred e-eecCc---------hhhhcCChhHHHHHHHHHHH
Q psy10250 237 D-IVIQR---------SLVLNNQWPELFSEVKQMKE 262 (387)
Q Consensus 237 D-~Vin~---------~~lk~g~~~~v~~Ei~~v~~ 262 (387)
= ..-|+ .++++||++..++--..+..
T Consensus 209 is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 244 (297)
T 3flu_A 209 ITVAANAAPKLFADMCRAALQGDIALARELNDRLIP 244 (297)
T ss_dssp EESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EechHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3 22332 44556776665554444443
No 495
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=50.31 E-value=81 Score=37.96 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=61.1
Q ss_pred HHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEE--
Q psy10250 223 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI-- 300 (387)
Q Consensus 223 ~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfV-- 300 (387)
.-++.+++.|+.---+++.- |+.. .++...+.+..+ +|||--.+- +...+ +.+..+.++|+|++
T Consensus 664 ~~~~~~~~~gv~i~~v~~~a-----g~p~--~~~~~~~i~~lG----~~vi~~~~~--~~~a~-~~~~~~~~~g~d~~ii 729 (2051)
T 2uv8_G 664 PLIKELRSKGYPIQFLTIGA-----GVPS--LEVASEYIETLG----LKYLGLKPG--SIDAI-SQVINIAKAHPNFPIA 729 (2051)
T ss_dssp HHHHHHHHTTCSEEEEEEES-----SCCC--HHHHHHHHHHSC----CSCEEECCC--SHHHH-HHHHHHHHHSTTSCEE
T ss_pred HHHHHHHHcCCCcceEEecC-----CCCc--hhhHHHHHHHcC----CEEEEecCc--hHHHH-HHHHHHHHhCCCceeE
Confidence 44677788887642233322 3221 111222332222 566643332 23334 45566778999994
Q ss_pred EcCCCCCCCCC-ChhhhHhH-HHHHHHHHHHcCCCceEeEeccCCCHHHHHHHH
Q psy10250 301 KTSTGKEKTNA-TIPAGIIM-CSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 352 (387)
Q Consensus 301 KTSTGf~~~ga-t~~~~~~m-~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i 352 (387)
=.-+|+..+|- ..++...+ +.-+..+++. -++-|=|+|||-|......++
T Consensus 730 ~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~--~~ipviaaGGi~dg~~~~aaL 781 (2051)
T 2uv8_G 730 LQWTGGRGGGHHSFEDAHTPMLQMYSKIRRH--PNIMLIFGSGFGSADDTYPYL 781 (2051)
T ss_dssp EEECCSSCSEECCSCCSSHHHHHHHHHHTTC--TTBCCEEESSCCSHHHHTHHH
T ss_pred EEEEccCcCCCCCcccccccHHHHHHHHHhc--CCceEEEeCCCCCHHHHHHHH
Confidence 45678865542 21211111 1122222222 368899999999999999998
No 496
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=50.10 E-value=36 Score=30.49 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCC
Q psy10250 285 IYCASMTAMFAGSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 362 (387)
Q Consensus 285 i~~a~~ia~~aGaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~ 362 (387)
....++...++|+|+|--+ +....+.... ...+.++.+++.+ .+.|=+.|||++.+++..++ .+|++
T Consensus 33 ~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~---~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~-----~~Gad 99 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFL-DISATHEERA---ILLDVVARVAERV--FIPLTVGGGVRSLEDARKLL-----LSGAD 99 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEE-ECCSSTTCHH---HHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHH-----HHTCS
T ss_pred HHHHHHHHHHcCCCEEEEE-cCCccccCcc---ccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHH-----HcCCC
Confidence 4455677788999977543 1111111111 1123455555433 56777899999999999999 47884
No 497
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=49.90 E-value=46 Score=33.72 Aligned_cols=113 Identities=12% Similarity=0.038 Sum_probs=69.1
Q ss_pred HHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCCEEE
Q psy10250 222 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 301 (387)
Q Consensus 222 ~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaDfVK 301 (387)
..|.+.|++.|++=| -+|-.-+.+-..+ .+-..+++...+. -+.+|-|.+.- |++++.++ .++ +|-|=
T Consensus 167 ~eE~~~A~~lga~iI--Ginnr~L~t~~~d--l~~~~~L~~~ip~--~~~vIaEsGI~-t~edv~~~----~~~-a~avL 234 (452)
T 1pii_A 167 EEEQERAIALGAKVV--GINNRDLRDLSID--LNRTRELAPKLGH--NVTVISESGIN-TYAQVREL----SHF-ANGFL 234 (452)
T ss_dssp HHHHHHHHHTTCSEE--EEESEETTTTEEC--THHHHHHHHHHCT--TSEEEEESCCC-CHHHHHHH----TTT-CSEEE
T ss_pred HHHHHHHHHCCCCEE--EEeCCCCCCCCCC--HHHHHHHHHhCCC--CCeEEEECCCC-CHHHHHHH----HHh-CCEEE
Confidence 467888888888742 3454444432222 3334445554553 35689999977 78877554 455 77665
Q ss_pred cCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCcc
Q psy10250 302 TSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 364 (387)
Q Consensus 302 TSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~ 364 (387)
-.+++.. ...+. ..++.+. .+ .+|+. ||++.++|.... ++|++++
T Consensus 235 VGealmr-~~d~~------~~~~~l~---~~--~~KIC-Git~~eda~~a~-----~~Gad~i 279 (452)
T 1pii_A 235 IGSALMA-HDDLH------AAVRRVL---LG--ENKVC-GLTRGQDAKAAY-----DAGAIYG 279 (452)
T ss_dssp ECHHHHT-CSCHH------HHHHHHH---HC--SCEEC-CCCSHHHHHHHH-----HHTCSEE
T ss_pred EcHHHcC-CcCHH------HHHHHHH---HH--hcccc-CCCcHHHHHHHH-----hcCCCEE
Confidence 5666532 22332 3455553 23 36774 899999999999 5899643
No 498
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=49.87 E-value=20 Score=33.82 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCC---------CEEEcCCCCCCCCCChhhhHhHHHHHH
Q psy10250 254 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS---------DFIKTSTGKEKTNATIPAGIIMCSAIK 324 (387)
Q Consensus 254 ~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGa---------DfVKTSTGf~~~gat~~~~~~m~~~v~ 324 (387)
++|++++.++|.. .-+ .|=-|+=+ +.+.+....++|.++|+ +.|-..||. +.+|+++.++..++
T Consensus 196 leEl~avAkAca~-~g~-~lEPTGGI-dl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~----TrpedV~~ll~~~K 268 (275)
T 3m6y_A 196 EEEYRAVAKACAE-EGF-ALEPTGGI-DKENFETIVRIALEANVEQVIPHVYSSIIDKETGN----TKVEAVRELLAVVK 268 (275)
T ss_dssp HHHHHHHHHHHHH-HTC-EEEEBSSC-CTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCC----BCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCc-eECCCCCc-cHhHHHHHHHHHHHcCCCeecccccceeccCCCCC----CCHHHHHHHHHHHH
Q ss_pred HHHHHcC
Q psy10250 325 HFHKLSG 331 (387)
Q Consensus 325 ~~~~~~~ 331 (387)
.+.+..+
T Consensus 269 ~l~~~~~ 275 (275)
T 3m6y_A 269 KLVDQYA 275 (275)
T ss_dssp HHHTTCC
T ss_pred HHHhhcC
No 499
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=49.83 E-value=1.2e+02 Score=29.43 Aligned_cols=115 Identities=8% Similarity=0.001 Sum_probs=67.8
Q ss_pred ecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeeccCCChHHHHHHHHHHHHcCCC-EEEcCCC------CCCCCC
Q psy10250 239 VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD-FIKTSTG------KEKTNA 311 (387)
Q Consensus 239 Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~~L~t~e~i~~a~~ia~~aGaD-fVKTSTG------f~~~ga 311 (387)
++|.--|.+.-.+++.++++...+.-.+ .+ +|+-.+-- +.++..++++.+.++|+| +|--.-| ...-+.
T Consensus 101 ~iN~~G~~n~G~~~~~~~l~~~~~~~~~-~p--vivsI~g~-~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~ 176 (345)
T 3oix_A 101 SINSMGLPNLGINYYLDYVTELQKQPDS-KN--HFLSLVGM-SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAY 176 (345)
T ss_dssp EEECCCCCBSCHHHHHHHHHHHHHSTTC-CC--CEEEECCS-SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGG
T ss_pred hhccCCCCChhHHHHHHHHHHHhhccCC-CC--EEEEecCC-CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcC
Confidence 3454344445577777877775421112 22 44444333 578888888988888987 8754332 111223
Q ss_pred ChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccC
Q psy10250 312 TIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 365 (387)
Q Consensus 312 t~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~ 365 (387)
.++.+..+ ++.+++.+...+.||.+-+. +..+.....+ .+|+++++
T Consensus 177 ~~e~l~~i---l~av~~~~~~PV~vKi~p~~-~~~~~a~~~~----~aga~~i~ 222 (345)
T 3oix_A 177 DFETTDQI---LSEVFTYFTKPLGIKLPPYF-DIVHFDQAAA----IFNXYPLT 222 (345)
T ss_dssp CHHHHHHH---HHHHTTTCCSCEEEEECCCC-CHHHHHHHHH----HHTTSCCS
T ss_pred CHHHHHHH---HHHHHHHhCCCeEEEECCCC-CHHHHHHHHH----HhCCCceE
Confidence 34444334 44445556678999999884 6666666664 57887663
No 500
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=49.81 E-value=1.7e+02 Score=28.06 Aligned_cols=135 Identities=8% Similarity=0.009 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHCCCCeeeeecCchhhhcCChhHHHHHHHHHHHHhCCCcceEEEEeec-cCCChHHHHHHHHHHHHc
Q psy10250 217 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIYCASMTAMFA 295 (387)
Q Consensus 217 ~~e~K~~Ea~~Ai~~GAdEID~Vin~~~lk~g~~~~v~~Ei~~v~~~~~~~~~lKvIlEt~-~L~t~e~i~~a~~ia~~a 295 (387)
+.+.-..+++.+++.|.+-+.+=+. .+...+-+++|+++. + -+++.+... -+ +.++ .+.++...+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~--------~~~d~~~v~avr~a~-~--~~~l~vDan~~~-~~~~-~~~~~~l~~~ 214 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIK--------PGWDVQPVRATREAF-P--DIRLTVDANSAY-TLAD-AGRLRQLDEY 214 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECB--------TTBSHHHHHHHHHHC-T--TSCEEEECTTCC-CGGG-HHHHHTTGGG
T ss_pred CHHHHHHHHHHHHHhcccEEEEecC--------hHHHHHHHHHHHHHc-C--CCeEEEeCCCCC-CHHH-HHHHHHHHhC
Confidence 6666778899999999998886431 122234478888887 4 245566653 34 5566 6777777888
Q ss_pred CCCEEEcCCCCCCCCCChhhhHhHHHHHHHHHHHcCCCceEeEeccCCCHHHHHHHHHHHHHhcCCCccCCCcceeec-c
Q psy10250 296 GSDFIKTSTGKEKTNATIPAGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA-S 374 (387)
Q Consensus 296 GaDfVKTSTGf~~~gat~~~~~~m~~~v~~~~~~~~~~~gIKasGGIrt~~~a~~~i~l~~~~~Ga~w~~~~~~RIGt-S 374 (387)
|.+||--..- + -.. +..+.+++.+ ++.|=+-+.+.+..++..++. .-.++.++++..|+|. +
T Consensus 215 ~i~~iEqP~~--~--~d~-------~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~----~~~~d~v~ik~~~~GGit 277 (375)
T 1r0m_A 215 DLTYIEQPLA--W--DDL-------VDHAELARRI--RTPLCLDESVASASDARKALA----LGAGGVINLKVARVGGHA 277 (375)
T ss_dssp CCSCEECCSC--T--TCS-------HHHHHHHHHC--SSCEEESTTCCSHHHHHHHHH----HTSCSEEEECTTTTTSHH
T ss_pred CCcEEECCCC--c--ccH-------HHHHHHHHhC--CCCEEecCccCCHHHHHHHHH----hCCCCEEEECcchhcCHH
Confidence 9999985431 1 122 2344455443 356656567889999999985 3447777888888855 5
Q ss_pred chHHHHH
Q psy10250 375 SLLNNIL 381 (387)
Q Consensus 375 s~~~il~ 381 (387)
..+++..
T Consensus 278 ~~~~i~~ 284 (375)
T 1r0m_A 278 ESRRVHD 284 (375)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555554
Done!