Query psy10252
Match_columns 85
No_of_seqs 115 out of 1033
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 21:45:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10252.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10252hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4do4_A Alpha-N-acetylgalactosa 100.0 2.8E-33 9.7E-38 204.9 6.3 84 1-85 11-94 (400)
2 3hg3_A Alpha-galactosidase A; 100.0 3.5E-33 1.2E-37 208.5 6.5 85 1-85 11-95 (404)
3 3lrk_A Alpha-galactosidase 1; 99.9 1.4E-28 4.8E-33 186.7 5.8 74 1-85 32-105 (479)
4 1uas_A Alpha-galactosidase; TI 99.9 6.6E-28 2.3E-32 176.4 5.9 75 1-85 11-85 (362)
5 1szn_A Alpha-galactosidase; (b 99.9 2.7E-27 9.1E-32 176.7 5.1 75 1-85 14-88 (417)
6 3a5v_A Alpha-galactosidase; be 99.9 5.6E-27 1.9E-31 173.9 5.8 75 1-85 11-85 (397)
7 3a21_A Putative secreted alpha 99.9 2.3E-26 7.7E-31 177.5 5.8 75 1-85 14-88 (614)
8 3cc1_A BH1870 protein, putativ 99.9 3.8E-26 1.3E-30 170.8 5.3 74 1-85 14-105 (433)
9 4fnq_A Alpha-galactosidase AGA 99.9 2.7E-22 9.2E-27 157.8 6.2 70 1-85 331-403 (729)
10 2xn2_A Alpha-galactosidase; hy 99.8 3.6E-19 1.2E-23 140.2 6.7 70 1-85 335-407 (732)
11 3mi6_A Alpha-galactosidase; NE 99.8 3E-19 1E-23 141.2 6.2 70 1-85 332-404 (745)
12 2yfo_A Alpha-galactosidase-suc 99.8 1.5E-19 5.2E-24 142.2 3.9 70 1-85 331-403 (720)
13 1zy9_A Alpha-galactosidase; TM 99.7 9.6E-18 3.3E-22 129.1 4.4 65 1-85 197-261 (564)
14 2f2h_A Putative family 31 gluc 98.5 2.4E-07 8.1E-12 73.6 6.4 57 23-85 281-337 (773)
15 2g3m_A Maltase, alpha-glucosid 98.4 3.4E-07 1.1E-11 71.9 5.8 55 23-85 187-241 (693)
16 4ba0_A Alpha-glucosidase, puta 98.1 4.8E-06 1.6E-10 66.6 6.3 59 23-85 274-333 (817)
17 3nsx_A Alpha-glucosidase; stru 98.1 6.5E-06 2.2E-10 64.5 6.5 55 23-85 175-229 (666)
18 3lpp_A Sucrase-isomaltase; gly 98.1 5.2E-06 1.8E-10 67.1 5.7 55 23-85 330-384 (898)
19 2xvl_A Alpha-xylosidase, putat 98.0 9.3E-06 3.2E-10 66.4 6.3 57 23-85 445-501 (1020)
20 3l4y_A Maltase-glucoamylase, i 98.0 8.5E-06 2.9E-10 65.7 5.5 55 23-85 302-356 (875)
21 3a24_A Alpha-galactosidase; gl 97.7 0.0001 3.5E-09 57.8 6.8 52 23-85 306-358 (641)
22 3top_A Maltase-glucoamylase, i 97.1 0.00058 2E-08 55.4 4.8 54 23-85 303-356 (908)
23 2x2h_A Alpha-1,4-glucan lyase 94.3 0.0098 3.3E-07 48.8 0.6 54 24-85 377-440 (1027)
24 2d73_A Alpha-glucosidase SUSB; 90.8 0.55 1.9E-05 37.5 6.2 55 23-85 368-429 (738)
25 3rpd_A Methionine synthase (B1 61.7 3.7 0.00013 29.6 1.9 30 24-53 162-193 (357)
26 2h62_A BMP-2, BMP-2A, bone mor 60.2 5.1 0.00017 24.5 2.1 19 1-19 26-51 (114)
27 3evs_B Growth/differentiation 50.9 11 0.00037 23.0 2.5 34 1-34 28-71 (117)
28 4e8j_A Lincosamide resistance 50.0 13 0.00045 24.2 2.9 31 20-56 3-33 (161)
29 1rzw_A Protein AF2095(GR4); be 48.6 23 0.00077 21.9 3.7 31 23-57 56-86 (123)
30 1wdd_S Ribulose bisphosphate c 47.4 22 0.00075 22.4 3.5 29 23-54 21-49 (128)
31 2qcq_A Bone morphogenetic prot 46.5 5.4 0.00019 24.1 0.5 18 1-18 20-44 (110)
32 1gk8_I Ribulose bisphosphate c 44.3 25 0.00086 22.5 3.5 29 23-54 21-49 (140)
33 2knq_A General secretion pathw 42.9 34 0.0012 21.1 3.9 18 40-57 42-64 (142)
34 1rbl_M Ribulose 1,5 bisphospha 42.8 19 0.00067 22.0 2.7 30 23-55 20-49 (109)
35 1svd_M Ribulose bisphosphate c 42.3 22 0.00076 21.7 2.9 30 23-55 22-51 (110)
36 3zxw_B Ribulose bisphosphate c 41.9 20 0.00069 22.2 2.6 24 23-47 19-42 (118)
37 1bxn_I Rubisco, protein (ribul 39.1 25 0.00087 22.4 2.8 25 23-48 14-38 (139)
38 1lxi_A Bone morphogenetic prot 38.2 16 0.00054 23.0 1.8 34 1-34 50-93 (139)
39 4f0h_B Ribulose bisphosphate c 37.9 30 0.001 22.1 3.0 28 23-53 14-41 (138)
40 1t6s_A Conserved hypothetical 37.5 34 0.0012 22.1 3.3 39 23-62 36-76 (162)
41 1w79_A D-alanyl-D-alanine carb 37.3 63 0.0022 24.2 5.2 35 22-58 97-132 (489)
42 1ypx_A Putative vitamin-B12 in 37.1 20 0.00067 25.8 2.3 29 25-53 159-189 (375)
43 2tgi_A Transforming growth fac 35.5 21 0.00073 21.5 2.0 33 1-34 28-67 (112)
44 1wv9_A Rhodanese homolog TT165 35.4 14 0.00047 20.7 1.1 17 40-56 73-89 (94)
45 3v39_A D-alanyl-D-alanine carb 34.3 56 0.0019 24.2 4.5 33 22-56 79-111 (418)
46 1bwv_S Rubisco, protein (ribul 34.3 34 0.0012 21.8 2.9 25 23-48 14-38 (138)
47 3ppg_A 5-methyltetrahydroptero 33.6 25 0.00085 28.3 2.6 31 25-55 608-640 (789)
48 3foj_A Uncharacterized protein 32.9 14 0.00049 20.8 0.9 17 40-56 76-92 (100)
49 4ehx_A Tetraacyldisaccharide 4 32.8 16 0.00054 25.8 1.2 16 42-57 129-144 (315)
50 1zkz_A Growth/differentiation 32.7 18 0.00062 21.7 1.3 33 1-33 20-62 (110)
51 2arp_A Inhibin beta A chain; c 32.6 9.1 0.00031 23.3 -0.1 18 1-18 23-47 (116)
52 1q7s_A BIT1, protein CGI-147; 32.5 59 0.002 19.6 3.7 28 23-54 59-86 (117)
53 1nza_A CUTA, divalent cation t 32.4 20 0.00068 21.5 1.5 59 22-85 9-76 (103)
54 1d4t_A T cell signal transduct 31.7 36 0.0012 19.4 2.6 24 60-84 59-88 (104)
55 1jyr_A Growth factor receptor- 31.7 25 0.00085 20.1 1.8 23 61-84 59-81 (96)
56 1w5d_A Penicillin-binding prot 31.6 78 0.0027 23.4 4.9 33 23-57 101-134 (462)
57 1mil_A SHC adaptor protein; SH 31.4 30 0.001 20.0 2.1 22 61-83 59-80 (104)
58 3iwh_A Rhodanese-like domain p 31.3 15 0.00051 21.4 0.8 16 40-55 76-91 (103)
59 3eme_A Rhodanese-like domain p 30.9 16 0.00055 20.7 0.9 17 40-56 76-92 (103)
60 3gk5_A Uncharacterized rhodane 30.9 14 0.00048 21.4 0.6 17 40-56 75-91 (108)
61 4ab4_A Xenobiotic reductase B; 30.6 22 0.00074 25.7 1.7 33 22-54 142-176 (362)
62 1r1p_A GRB2-related adaptor pr 30.3 32 0.0011 19.7 2.1 23 61-84 64-86 (100)
63 2f2l_A Peptidoglycan-recogniti 29.9 68 0.0023 20.4 3.8 33 22-54 37-74 (167)
64 3ov1_A Growth factor receptor- 29.5 28 0.00094 20.7 1.8 24 60-84 61-84 (117)
65 3gka_A N-ethylmaleimide reduct 29.4 18 0.00063 26.0 1.1 33 22-54 150-184 (361)
66 1fob_A Beta-1,4-galactanase; B 28.5 1.5E+02 0.005 20.7 5.7 20 22-41 56-75 (334)
67 1xty_A PTH, peptidyl-tRNA hydr 28.4 85 0.0029 18.9 3.9 28 24-55 63-90 (120)
68 3ek6_A Uridylate kinase; UMPK 27.8 68 0.0023 21.4 3.7 30 22-53 28-57 (243)
69 3tg1_B Dual specificity protei 27.7 18 0.00063 22.3 0.8 17 40-56 122-138 (158)
70 3nwy_A Uridylate kinase; allos 27.7 60 0.002 22.5 3.5 30 22-53 68-97 (281)
71 3l5l_A Xenobiotic reductase A; 27.5 30 0.001 24.6 2.0 33 21-53 146-180 (363)
72 4a7w_A Uridylate kinase; trans 27.3 75 0.0026 21.1 3.9 30 22-53 26-55 (240)
73 1wn2_A Peptidyl-tRNA hydrolase 25.8 99 0.0034 18.7 3.9 29 23-55 63-91 (121)
74 4gqr_A Pancreatic alpha-amylas 25.8 59 0.002 22.9 3.2 19 23-41 74-92 (496)
75 2zv3_A PTH, peptidyl-tRNA hydr 25.6 91 0.0031 18.6 3.7 29 23-55 57-85 (115)
76 4a3u_A NCR, NADH\:flavin oxido 25.4 22 0.00075 25.4 0.9 59 22-83 141-212 (358)
77 1ypr_A Profilin; actin-binding 25.1 1.2E+02 0.004 18.3 4.2 31 21-51 35-71 (125)
78 2hdv_A SH2-B PH domain contain 24.9 37 0.0013 19.8 1.8 24 60-84 66-89 (111)
79 3dmi_A Cytochrome C6; electron 24.6 82 0.0028 16.5 3.1 16 22-37 66-81 (88)
80 3g5j_A Putative ATP/GTP bindin 24.4 16 0.00056 21.2 0.0 16 40-55 110-125 (134)
81 3cuq_A Vacuolar-sorting protei 24.3 77 0.0026 21.7 3.5 27 22-51 114-140 (234)
82 2eo3_A CRK-like protein; phosp 24.2 67 0.0023 18.6 2.8 23 61-84 74-96 (111)
83 3hgj_A Chromate reductase; TIM 24.2 32 0.0011 24.3 1.6 34 21-54 140-175 (349)
84 2gsb_A RAS GTPase-activating p 24.0 52 0.0018 19.5 2.3 23 61-84 72-94 (119)
85 1hjs_A Beta-1,4-galactanase; 4 23.9 1.9E+02 0.0064 20.1 6.1 23 23-51 57-79 (332)
86 3nhv_A BH2092 protein; alpha-b 23.9 24 0.00081 21.6 0.7 16 40-55 94-109 (144)
87 3flh_A Uncharacterized protein 23.8 22 0.00075 21.0 0.6 17 40-56 93-109 (124)
88 1rlk_A Hypothetical protein TA 23.8 1.1E+02 0.0036 18.4 3.7 29 23-55 59-87 (117)
89 3eau_A Voltage-gated potassium 23.6 53 0.0018 22.6 2.6 27 23-54 30-56 (327)
90 2jvf_A De novo protein M7; tet 23.4 69 0.0024 18.4 2.6 27 24-51 58-84 (96)
91 1ea9_C Cyclomaltodextrinase; h 23.4 1.1E+02 0.0038 22.9 4.5 56 24-85 170-230 (583)
92 3l5a_A NADH/flavin oxidoreduct 23.2 38 0.0013 24.9 1.8 53 21-73 158-224 (419)
93 2a1f_A Uridylate kinase; PYRH, 23.0 1.1E+02 0.0036 20.2 4.0 30 22-53 27-56 (247)
94 1byi_A Dethiobiotin synthase; 22.8 76 0.0026 19.9 3.1 24 24-53 94-117 (224)
95 1yzs_A Sulfiredoxin; PARB doma 22.7 86 0.0029 19.3 3.2 20 22-41 40-59 (121)
96 1i3z_A EWS/FLI1 activated tran 22.6 40 0.0014 19.2 1.6 23 61-84 59-87 (103)
97 4gbu_A NADPH dehydrogenase 1; 22.0 52 0.0018 23.7 2.4 59 22-83 161-232 (400)
98 3uc9_A Increased recombination 21.8 1.7E+02 0.0057 20.0 4.8 51 23-83 143-193 (233)
99 2eg4_A Probable thiosulfate su 21.7 50 0.0017 21.3 2.1 16 40-56 82-98 (230)
100 1xw3_A Sulfiredoxin; retroredu 21.7 1E+02 0.0035 18.6 3.3 20 22-41 29-48 (110)
101 3kru_A NADH:flavin oxidoreduct 21.7 50 0.0017 23.5 2.2 33 21-53 131-165 (343)
102 3maz_A Signal-transducing adap 21.4 55 0.0019 20.3 2.1 21 62-83 73-96 (125)
103 4hd5_A Polysaccharide deacetyl 21.3 59 0.002 23.6 2.5 20 20-39 162-181 (360)
104 3lut_A Voltage-gated potassium 21.1 62 0.0021 22.7 2.6 27 23-54 64-90 (367)
105 3gr7_A NADPH dehydrogenase; fl 21.0 35 0.0012 24.1 1.3 33 21-53 132-166 (340)
106 2jjx_A Uridylate kinase, UMP k 21.0 1.2E+02 0.0041 20.1 3.9 30 22-53 31-60 (255)
107 2xz8_A Peptidoglycan-recogniti 20.8 1.5E+02 0.0051 18.7 4.1 20 36-55 63-82 (150)
108 1z9d_A Uridylate kinase, UK, U 20.6 1.3E+02 0.0043 20.0 4.0 30 22-53 26-55 (252)
109 3s9k_A Tyrosine-protein kinase 20.4 96 0.0033 17.9 3.0 21 62-83 73-94 (118)
110 1c25_A CDC25A; hydrolase, cell 20.2 42 0.0014 20.4 1.4 16 40-55 120-136 (161)
111 3ohg_A Uncharacterized protein 20.1 62 0.0021 22.6 2.4 25 28-56 221-245 (285)
112 1wqu_A C-FES, proto-oncogene t 20.1 72 0.0024 18.7 2.4 21 62-83 68-88 (114)
113 1mwp_A Amyloid A4 protein; hep 20.1 1.1E+02 0.0038 18.2 3.1 22 61-82 21-45 (96)
114 2kk6_A Proto-oncogene tyrosine 20.0 52 0.0018 19.5 1.7 21 62-83 70-90 (116)
No 1
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=99.98 E-value=2.8e-33 Score=204.92 Aligned_cols=84 Identities=58% Similarity=1.238 Sum_probs=81.7
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+.+|..++..++||+.|+++||.|++.||+++||+||+|||||+. .||++|+|++|++|||+||++|+
T Consensus 11 mGWnSW~~~~~~i~~~~~~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~-~rd~~G~~~~d~~rFP~G~k~la 89 (400)
T 4do4_A 11 MGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPKRFPHGIPFLA 89 (400)
T ss_dssp EEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEE-EECTTCCEEECTTTSTTCHHHHH
T ss_pred CcccchHhhccccCccccccccccHHHHHHHHHHHHHCcchhhCCeEEEECCCccc-CCCCCCCEeECcccCCcccHHHH
Confidence 89999999999999999999999999999999999999999999999999999996 68899999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 90 dyih~ 94 (400)
T 4do4_A 90 DYVHS 94 (400)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 2
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=99.98 E-value=3.5e-33 Score=208.50 Aligned_cols=85 Identities=60% Similarity=1.254 Sum_probs=83.2
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+.+|+.+|+.||||+.|+++|++|++.||+++||+||+|||||+...||.+|+|++|++|||+||++|+
T Consensus 11 mGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~ 90 (404)
T 3hg3_A 11 MGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA 90 (404)
T ss_dssp EEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHH
T ss_pred eEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 91 ~~ih~ 95 (404)
T 3hg3_A 91 NYVHS 95 (404)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 3
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=99.95 E-value=1.4e-28 Score=186.71 Aligned_cols=74 Identities=38% Similarity=0.869 Sum_probs=71.8
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+ |||+.|+++|+.|++.||+++||+||+|||||+. .||.+|+|++|++|||+||++|+
T Consensus 32 mGWNSW~~~~~~----------i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~-~rd~~G~~~~d~~kFP~Glk~La 100 (479)
T 3lrk_A 32 MGWDNWNTFACD----------VSEQLLLDTADRISDLGLKDMGYKYIILDDCWSS-GRDSDGFLVADEQKFPNGMGHVA 100 (479)
T ss_dssp EEEESHHHHTTC----------CCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEE-EECTTSCEEECTTTCTTCHHHHH
T ss_pred eEEEchHhhCcC----------CCHHHHHHHHHHHHhcCccccCceEEEECCcccc-ccCCCCCEecChhhcCCCHHHHH
Confidence 899999999999 9999999999999999999999999999999997 78889999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 101 d~ih~ 105 (479)
T 3lrk_A 101 DHLHN 105 (479)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 4
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=99.94 E-value=6.6e-28 Score=176.36 Aligned_cols=75 Identities=43% Similarity=0.994 Sum_probs=72.6
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+ |||+.|++.||.|++.||+++||+||+|||||+...|+..|+|++|++|||+||++|+
T Consensus 11 ~gwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~ 80 (362)
T 1uas_A 11 MGWNSWNHFYCG----------INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALA 80 (362)
T ss_dssp EEEESHHHHTTC----------CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHH
T ss_pred EEEECHHHHCCC----------CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHH
Confidence 899999999998 9999999999999999999999999999999998778889999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 81 ~~ih~ 85 (362)
T 1uas_A 81 DYVHA 85 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 5
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=99.93 E-value=2.7e-27 Score=176.74 Aligned_cols=75 Identities=41% Similarity=0.934 Sum_probs=72.6
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+ |||+.|+++|+.|++.||+++||+||+|||||+...|+..|+|++|++|||+||++|+
T Consensus 14 mgwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~ 83 (417)
T 1szn_A 14 LGWNSWNAYHCD----------IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLA 83 (417)
T ss_dssp EEEESHHHHTTC----------CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHH
T ss_pred EEEEchHhhCcC----------CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHH
Confidence 899999999998 9999999999999999999999999999999998878889999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 84 ~~i~~ 88 (417)
T 1szn_A 84 KKVHA 88 (417)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 6
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=99.93 E-value=5.6e-27 Score=173.89 Aligned_cols=75 Identities=39% Similarity=0.874 Sum_probs=72.4
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+++ |||+.|++.|+.|++.||+++||+||+|||||+...|+.+|+|++|++|||+||++|+
T Consensus 11 ~gwnsW~~~~~~----------~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~ 80 (397)
T 3a5v_A 11 MGWNTWNKYGCN----------VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLV 80 (397)
T ss_dssp EEEESHHHHGGG----------CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHH
T ss_pred EEEECHHHhCcC----------CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHH
Confidence 799999999998 9999999999999999999999999999999998778889999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 81 ~~i~~ 85 (397)
T 3a5v_A 81 DDIHN 85 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 7
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=99.93 E-value=2.3e-26 Score=177.54 Aligned_cols=75 Identities=33% Similarity=0.800 Sum_probs=72.7
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++|+|+ |||+.|+++||.|++.||+++||+||+|||||+...||.+|+|++|++|||+||++|+
T Consensus 14 ~gwnsw~~~~~~----------~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~gl~~l~ 83 (614)
T 3a21_A 14 MGWASWNSFAAK----------IDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAIT 83 (614)
T ss_dssp EEEESHHHHTTC----------CCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTTCHHHHH
T ss_pred eEEEchhhhCcc----------CCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCCcHHHHH
Confidence 899999999999 9999999999999999999999999999999998788999999999999999999999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
+|||+
T Consensus 84 ~~i~~ 88 (614)
T 3a21_A 84 AYIHS 88 (614)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99995
No 8
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=99.92 E-value=3.8e-26 Score=170.84 Aligned_cols=74 Identities=28% Similarity=0.603 Sum_probs=69.8
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccC-------------CCCCCCceee
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK-------------TRSFNGRLQA 67 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~-------------~~d~~G~~~~ 67 (85)
||||||++|+++ |||+.|+++|+.| +.||+++||+||+|||||+.. .+++.|+|++
T Consensus 14 ~gwnsW~~~~~~----------i~e~~i~~~ad~~-~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~~~~ 82 (433)
T 3cc1_A 14 MGWNSWDCYGAS----------VTEEEVLGNAEYM-ANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGRLLP 82 (433)
T ss_dssp EEEESHHHHTTC----------CCHHHHHHHHHHH-HHHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSCBCC
T ss_pred EEEEChhhhCCc----------CCHHHHHHHHHHH-HhcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCCEeE
Confidence 799999999998 9999999999999 789999999999999999985 3567899999
Q ss_pred cCCCCCC-----CHHHHHHHHhC
Q psy10252 68 DAKRFPR-----GIADLSNYVST 85 (85)
Q Consensus 68 d~~kFP~-----Gl~~l~~~ih~ 85 (85)
|++|||+ ||++|+++||+
T Consensus 83 ~~~kFP~~~~~~Gl~~l~~~ih~ 105 (433)
T 3cc1_A 83 ATNRFPSAKNGAGFKPLSDAIHD 105 (433)
T ss_dssp CTTTCGGGTTTTTTHHHHHHHHH
T ss_pred CCccCCCcccCCCHHHHHHHHHH
Confidence 9999999 99999999995
No 9
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=99.86 E-value=2.7e-22 Score=157.76 Aligned_cols=70 Identities=21% Similarity=0.413 Sum_probs=63.6
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCC---CCCceeecCCCCCCCHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRS---FNGRLQADAKRFPRGIA 77 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d---~~G~~~~d~~kFP~Gl~ 77 (85)
||||||++++++ +||+.|+++|+.++ ++||+||+|||||+...++ ..|+|++|++|||+||+
T Consensus 331 v~~NsW~a~~~d----------~~e~~i~~~ad~aa-----~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk 395 (729)
T 4fnq_A 331 ILINNWEATYFD----------FNEEKLVNIAKTEA-----ELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLD 395 (729)
T ss_dssp CEEECSTTTTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHH
T ss_pred eEEccccccccc----------CCHHHHHHHHHHHH-----hcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHH
Confidence 799999999998 99999999999975 4899999999999975443 45999999999999999
Q ss_pred HHHHHHhC
Q psy10252 78 DLSNYVST 85 (85)
Q Consensus 78 ~l~~~ih~ 85 (85)
+|+++||+
T Consensus 396 ~Lad~vh~ 403 (729)
T 4fnq_A 396 GLAKQVNE 403 (729)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999995
No 10
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=99.77 E-value=3.6e-19 Score=140.24 Aligned_cols=70 Identities=26% Similarity=0.498 Sum_probs=62.0
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCC---CCCCceeecCCCCCCCHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTR---SFNGRLQADAKRFPRGIA 77 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~---d~~G~~~~d~~kFP~Gl~ 77 (85)
||||||++++++ +||+.|++.|+.|+ ++||++|+|||||+.... +..|+|.+|++|||+||+
T Consensus 335 ~~wnsW~~~~~~----------~~ee~v~~~ad~~~-----~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk 399 (732)
T 2xn2_A 335 VLVNNWEATYFD----------FNEDKLKTIVDKAK-----KLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLG 399 (732)
T ss_dssp CEEECHHHHTTC----------CCHHHHHHHHHHHH-----HTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHH
T ss_pred eEEEchhhhccC----------CCHHHHHHHHHHHH-----HcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHH
Confidence 799999999998 99999999999875 468899999999996421 245999999999999999
Q ss_pred HHHHHHhC
Q psy10252 78 DLSNYVST 85 (85)
Q Consensus 78 ~l~~~ih~ 85 (85)
+|+++||+
T Consensus 400 ~lv~~ih~ 407 (732)
T 2xn2_A 400 HFADYVHE 407 (732)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999995
No 11
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=99.77 E-value=3e-19 Score=141.21 Aligned_cols=70 Identities=24% Similarity=0.428 Sum_probs=62.8
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCC---CCCCceeecCCCCCCCHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTR---SFNGRLQADAKRFPRGIA 77 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~---d~~G~~~~d~~kFP~Gl~ 77 (85)
||||||++++++ +||+.|++.|+.++ ++||++|+|||||+.... +..|+|.+|++|||+||+
T Consensus 332 ~~wNsW~~~~~d----------~tee~il~~ad~~~-----~~G~e~fviDDGW~~~r~~d~~~~Gdw~~d~~kFP~Gl~ 396 (745)
T 3mi6_A 332 VLINNWEATYFD----------FNEAKLMTIVNQAK-----RLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIE 396 (745)
T ss_dssp CEEECHHHHTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCTTHHH
T ss_pred eEEEchHhhCcC----------CCHHHHHHHHHHHH-----HcCCcEEEECcccccCCCCCcccCCCceeChhhcCccHH
Confidence 799999999998 99999999999975 478899999999997532 356999999999999999
Q ss_pred HHHHHHhC
Q psy10252 78 DLSNYVST 85 (85)
Q Consensus 78 ~l~~~ih~ 85 (85)
.|+++||+
T Consensus 397 ~lv~~ih~ 404 (745)
T 3mi6_A 397 HFSQAVHQ 404 (745)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999994
No 12
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=99.76 E-value=1.5e-19 Score=142.19 Aligned_cols=70 Identities=20% Similarity=0.351 Sum_probs=62.5
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCC---CCCCceeecCCCCCCCHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTR---SFNGRLQADAKRFPRGIA 77 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~---d~~G~~~~d~~kFP~Gl~ 77 (85)
||||||++++++ +||+.|++.|+.|+ ++||++|+|||||+...+ +..|+|.+|++|||+||+
T Consensus 331 ~~~nsW~~~~~~----------~~e~~i~~~ad~~~-----~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk 395 (720)
T 2yfo_A 331 VLINSWEAAYFD----------FTGDTIVDLAKEAA-----SLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLA 395 (720)
T ss_dssp CEEEHHHHHTTC----------CCHHHHHHHHHHHH-----HHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHH
T ss_pred eEEEchHHhCcC----------CCHHHHHHHHHHHH-----HcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHH
Confidence 799999999998 99999999999875 478899999999996432 346999999999999999
Q ss_pred HHHHHHhC
Q psy10252 78 DLSNYVST 85 (85)
Q Consensus 78 ~l~~~ih~ 85 (85)
+|+++||+
T Consensus 396 ~lvd~ih~ 403 (720)
T 2yfo_A 396 ELITRVHE 403 (720)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999995
No 13
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=99.69 E-value=9.6e-18 Score=129.14 Aligned_cols=65 Identities=17% Similarity=0.402 Sum_probs=60.7
Q ss_pred CcccchhhhhccCCCCCCCCCcCCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHH
Q psy10252 1 MGWLAWERFRCNTDCKNDPENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLS 80 (85)
Q Consensus 1 mGW~SW~~~~~~~~~~~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~ 80 (85)
||||||++++++ +||+.|++.|+.|+ ++||++|+|||||+.. .|+|++|++|||+ |++|+
T Consensus 197 ~gwnsW~~~~~~----------~te~~v~~~ad~~~-----~~G~~~~~IDdgW~~~----~Gdw~~d~~kFP~-lk~lv 256 (564)
T 1zy9_A 197 TGWCSWYHYFLD----------LTWEETLKNLKLAK-----NFPFEVFQIDDAYEKD----IGDWLVTRGDFPS-VEEMA 256 (564)
T ss_dssp EEEESHHHHGGG----------CCHHHHHHHHHHGG-----GTTCSEEEECTTSEEE----TTEEEEECTTCCC-HHHHH
T ss_pred eEEcchhccCcC----------CCHHHHHHHHHHHH-----hcCCcEEEECcccccc----cCCcccCcccCCC-HHHHH
Confidence 699999999998 99999999999975 6899999999999973 7999999999999 99999
Q ss_pred HHHhC
Q psy10252 81 NYVST 85 (85)
Q Consensus 81 ~~ih~ 85 (85)
++||+
T Consensus 257 d~lh~ 261 (564)
T 1zy9_A 257 KVIAE 261 (564)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99994
No 14
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=98.47 E-value=2.4e-07 Score=73.62 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
.+|+.|++.++.+++.++. ++.|+||++|+.. ...+++.+|+++||+ +++|++.||+
T Consensus 281 y~e~~v~~v~~~~r~~~IP---~dvi~lD~~w~~~--~~w~dft~d~~~FPd-p~~mv~~Lh~ 337 (773)
T 2f2h_A 281 YDEATVNSFIDGMAERNLP---LHVFHFDCFWMKA--FQWCDFEWDPLTFPD-PEGMIRRLKA 337 (773)
T ss_dssp CCHHHHHHHHHHHHHTTCC---CCEEEECGGGBCT--TCCSSCCBCTTTCSC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---eeEEEECcccccc--cccccceEChhhCCC-HHHHHHHHHH
Confidence 5899999999999887765 5899999999963 224689999999999 8999999994
No 15
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=98.41 E-value=3.4e-07 Score=71.92 Aligned_cols=55 Identities=16% Similarity=0.270 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-||+.|++.|+.+++.|+. ++.|.||++|... .++++.|+++||+ ++.|++.||+
T Consensus 187 ~~~~ev~~v~~~~~~~~IP---~dvi~lD~~y~~~----~~dft~d~~~FPd-p~~mv~~Lh~ 241 (693)
T 2g3m_A 187 YPQDKVVELVDIMQKEGFR---VAGVFLDIHYMDS----YKLFTWHPYRFPE-PKKLIDELHK 241 (693)
T ss_dssp CSHHHHHHHHHHHHHTTCC---EEEEEECGGGSBT----TBTTCCCTTTCSC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---cceEEEecceecC----CccceEChhhCCC-HHHHHHHHHH
Confidence 4899999999999887765 5899999999853 6789999999999 9999999994
No 16
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=98.10 E-value=4.8e-06 Score=66.59 Aligned_cols=59 Identities=24% Similarity=0.357 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCC-CCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKT-RSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~-~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-+++.|++.++.+.+.++. ++.|+||+.|.... .+..|++..|+++||+ .+.|++.||+
T Consensus 274 ~s~~ev~~vv~~~r~~~IP---~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~ 333 (817)
T 4ba0_A 274 RSEAETRATVQKYKTEDFP---LDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMMADFKQ 333 (817)
T ss_dssp CSHHHHHHHHHHHHHHTCC---CCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC---CcEEEEcccccCCccccccCccccccccCCC-HHHHHHHHHH
Confidence 3899999999999887665 68999999998642 2346899999999999 8999999994
No 17
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=98.08 E-value=6.5e-06 Score=64.49 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-+++.|++.++.+.+.++. ++.+.||..|... .++++.|+++||+ ++.|++.||+
T Consensus 175 ~~~~~v~~v~~~~~~~~IP---~dvi~lD~dy~~~----~~~ft~d~~~FPd-p~~mv~~Lh~ 229 (666)
T 3nsx_A 175 TTKEDFRAVAKGYRENHIP---IDMIYMDIDYMQD----FKDFTVNEKNFPD-FPEFVKEMKD 229 (666)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECGGGSST----TCTTCCCTTTCTT-HHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCC---cceEEEecHHHHh----hcccccChhhCCC-HHHHHHHHHH
Confidence 4899999999999987766 6899999999864 6889999999998 9999999996
No 18
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=98.06 E-value=5.2e-06 Score=67.05 Aligned_cols=55 Identities=9% Similarity=0.141 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-+++.|++.++.+.+.|+. ++.+.+|.+|... .++++.|+++||+ ++.|++.||+
T Consensus 330 ~s~~ev~~vv~~~r~~~IP---~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv~~Lh~ 384 (898)
T 3lpp_A 330 KSLDVVKEVVRRNREAGIP---FDTQVTDIDYMED----KKDFTYDQVAFNG-LPQFVQDLHD 384 (898)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECGGGSST----TCTTCCCTTTTTT-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---ceeeEeccccccC----CCcceEChhhCCC-HHHHHHHHHH
Confidence 4899999999999887765 5899999999864 5899999999996 9999999994
No 19
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=98.00 E-value=9.3e-06 Score=66.39 Aligned_cols=57 Identities=16% Similarity=0.080 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-|++.|++.++.+++.++. ++.|+||++|... +..+++..|+++||+ ++.|++.||+
T Consensus 445 ~sq~ev~~va~~~re~gIP---lDvi~lD~~y~~~--~~~~dFtwD~~rFPd-p~~mv~~Lh~ 501 (1020)
T 2xvl_A 445 KSSDEIIQNLKEYRDRKIP---IDNIVLDWSYWPE--DAWGSHDFDKQFFPD-PKALVDKVHA 501 (1020)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECSCCSCT--TCTTSCCCCTTTCSC-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---cceEEEecccccc--CcccceEEChhhCCC-HHHHHHHHHH
Confidence 4899999999999887765 6799999988753 456899999999999 9999999984
No 20
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=97.98 E-value=8.5e-06 Score=65.68 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-+++.|++.++.+.+.++. ++.+.+|.+|... .++++.|+++||+ ++.|++.||+
T Consensus 302 ~s~~ev~~vv~~~r~~~IP---~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv~~Lh~ 356 (875)
T 3l4y_A 302 GTLDNMREVVERNRAAQLP---YDVQHADIDYMDE----RRDFTYDSVDFKG-FPEFVNELHN 356 (875)
T ss_dssp CSHHHHHHHHHHHHHTTCC---CCEEEECGGGSBT----TBTTCCCTTTTTT-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC---CceEEEccchhcC----CCceeeChhhCCC-HHHHHHHHHH
Confidence 4899999999999887765 6899999999864 5889999999998 9999999994
No 21
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=97.66 E-value=0.0001 Score=57.81 Aligned_cols=52 Identities=17% Similarity=0.475 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCc-eeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGR-LQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~-~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
+|.+..++.+|..++ +||+||+||+||+...+ |+ ..|+|. .+|++|++|.|+
T Consensus 306 ~n~~~~k~yIDfAa~-----~G~~yvlvD~gW~~~~~---~d~~~~~p~---~di~~l~~Ya~~ 358 (641)
T 3a24_A 306 VNNPTYKAYIDFASA-----NGIEYVILDEGWAVNLQ---ADLMQVVKE---IDLKELVDYAAS 358 (641)
T ss_dssp SSHHHHHHHHHHHHH-----TTCCEEEECTTSBCTTS---CCTTCBCTT---CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----cCCCEEEEecccccCCC---CCccccCCc---CCHHHHHHHHHh
Confidence 799999999997654 78899999999996322 23 355553 369999999985
No 22
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=97.07 E-value=0.00058 Score=55.38 Aligned_cols=54 Identities=13% Similarity=0.225 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
-+++.|++.++.+.+.++. ++.+.+|..|... ..+++.|+ +||+ +++|++.||+
T Consensus 303 ~~~~ev~~vv~~~r~~~IP---lDvi~~Didym~~----~~~FT~d~-~FPd-p~~mv~~Lh~ 356 (908)
T 3top_A 303 QNDSEIASLYDEMVAAQIP---YDVQYSDIDYMER----QLDFTLSP-KFAG-FPALINRMKA 356 (908)
T ss_dssp CSHHHHHHHHHHHHHHTCC---CCEEEECGGGSST----TCTTCCCG-GGTT-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCC---eeeEEeecccccc----ccccccCC-CCCC-HHHHHHHHHH
Confidence 4889999999999987765 7899999999864 57799999 9998 9999999984
No 23
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=94.27 E-value=0.0098 Score=48.78 Aligned_cols=54 Identities=7% Similarity=0.147 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCC----------CCCHHHHHHHHhC
Q psy10252 24 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRF----------PRGIADLSNYVST 85 (85)
Q Consensus 24 ~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kF----------P~Gl~~l~~~ih~ 85 (85)
+|+.|++.++.+.+.++. ++.|.+|..|... +..+..|+++| |+ .+.|++.||+
T Consensus 377 ~~~~v~~vv~~~r~~~IP---lDvi~lDidymd~----~r~FT~D~~~~~~~~~~~~~fPd-p~~mv~~Lh~ 440 (1027)
T 2x2h_A 377 NNISVEEIVEGYQNNNFP---FEGLAVDVDMQDN----LRVFTTKGEFWTANRVGTGGDPN-NRSVFEWAHD 440 (1027)
T ss_dssp TCCBHHHHHHHHHHTTCC---CCEEEECGGGSST----TCTTCCCGGGBTTSSCCCSCCTT-SCBHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCC---CcceEEecccccC----CCccccccccCchhhcccccCCC-HHHHHHHHHh
Confidence 456799999999998776 6899999999865 34555555554 76 7889999884
No 24
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=90.79 E-value=0.55 Score=37.51 Aligned_cols=55 Identities=11% Similarity=0.311 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEe---ccccccCCCCCCC----ceeecCCCCCCCHHHHHHHHhC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINI---DDCWLDKTRSFNG----RLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~i---DdgW~~~~~d~~G----~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
+|-+.+++-+|-.++ .|++||+| |.||........+ -..|.| .| -|+.|++|-|+
T Consensus 368 ~nte~~K~YIDFAA~-----~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~p-d~--Dl~eL~~YA~s 429 (738)
T 2d73_A 368 ANTANVKRYIDFAAA-----HGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYP-DF--DVKEIHRYAAR 429 (738)
T ss_dssp CCHHHHHHHHHHHHH-----TTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCT-TC--CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----cCCCEEEEEeccCCcccccCccccccccccccCC-CC--CHHHHHHHHHh
Confidence 689999999997654 67889999 9999853111112 223333 23 39999999874
No 25
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=61.69 E-value=3.7 Score=29.64 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHH--cCccccCceEEEeccc
Q psy10252 24 SERLFRTMADLVVS--EGYAAVGYEYINIDDC 53 (85)
Q Consensus 24 ~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg 53 (85)
.++.+.+.|+++.+ ..|.++|.++|+||+.
T Consensus 162 ~~e~~~dlA~a~~~ei~~l~~aG~~~IQiDeP 193 (357)
T 3rpd_A 162 REKLAWEFAKILNEEAKELEAAGVDIIQFDEP 193 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEECG
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCc
Confidence 34556666665533 2477889999999995
No 26
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A
Probab=60.19 E-value=5.1 Score=24.45 Aligned_cols=19 Identities=32% Similarity=1.006 Sum_probs=16.0
Q ss_pred Ccccch-------hhhhccCCCCCCC
Q psy10252 1 MGWLAW-------ERFRCNTDCKNDP 19 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~~ 19 (85)
+||+.| ++++|.+.|+..-
T Consensus 26 lGW~~WIiaP~gy~a~yC~G~C~~p~ 51 (114)
T 2h62_A 26 VGWNDWIVAPPGYHAFYCHGECPFPL 51 (114)
T ss_dssp HTCTTTEEECSEEECCEEECBCCSSC
T ss_pred cCCcccEEcCCceEeEeeeeECCCCc
Confidence 599999 7999999998653
No 27
>3evs_B Growth/differentiation factor 5; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Homo sapiens} SCOP: g.17.1.0 PDB: 1waq_A 3qb4_A 2bhk_A
Probab=50.88 E-value=11 Score=23.02 Aligned_cols=34 Identities=26% Similarity=0.706 Sum_probs=21.6
Q ss_pred Ccccch-------hhhhccCCCCCCCCCcC---CHHHHHHHHHH
Q psy10252 1 MGWLAW-------ERFRCNTDCKNDPENCI---SERLFRTMADL 34 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~~~~~i---~e~~i~~~ad~ 34 (85)
+||..| ++++|.+.|+......+ +...|......
T Consensus 28 lGW~~WIiaP~gy~a~yC~G~C~~p~~~~~~~tnHa~iq~l~~~ 71 (117)
T 3evs_B 28 MGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNS 71 (117)
T ss_dssp GTGGGTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHH
T ss_pred CCCcceeeCCCcccceeeeeECCCCcccccCCchHHHHHHHHHh
Confidence 699988 47999999986543222 34445544443
No 28
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=50.00 E-value=13 Score=24.19 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.1
Q ss_pred CCcCCHHHHHHHHHHHHHcCccccCceEEEecccccc
Q psy10252 20 ENCISERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 56 (85)
Q Consensus 20 ~~~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~ 56 (85)
.+.|+.+.+++.++.|...+.+ ..|+.||.-
T Consensus 3 ~~~~~~~d~~evl~~l~~~~v~------~~i~GGwAv 33 (161)
T 4e8j_A 3 NNNVTEKELFYILDLFEHMKVT------YWLDGGWGV 33 (161)
T ss_dssp -CCCCHHHHHHHHHHHHHHTCC------EEEEHHHHH
T ss_pred ccccCHHHHHHHHHHHHhCCCc------EEEEcHhhh
Confidence 3558898999999999776554 678999974
No 29
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=48.64 E-value=23 Score=21.95 Aligned_cols=31 Identities=13% Similarity=-0.058 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccC
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDK 57 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~ 57 (85)
-+|+.+++..+.+.+.|+. -+++.|.||...
T Consensus 56 ~~e~el~~L~~~a~~~gl~----~~~I~DAG~Tei 86 (123)
T 1rzw_A 56 KSLEELLGIKHKAESLGLV----TGLVQDAGLTEV 86 (123)
T ss_dssp SCHHHHHHHHHHHHHTTCC----EEEECCTTCCSC
T ss_pred CCHHHHHHHHHHHHHCCCC----EEEEECCCCccc
Confidence 3799999999988777765 368889999753
No 30
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=47.41 E-value=22 Score=22.39 Aligned_cols=29 Identities=3% Similarity=0.125 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEecccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW 54 (85)
+|++.|.+|++.|.+.|.+. +.++. |++.
T Consensus 21 lt~eqI~kQI~Yll~qGw~p-~lEf~--d~~~ 49 (128)
T 1wdd_S 21 LTVEDLLKQIEYLLRSKWVP-CLEFS--KVGF 49 (128)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--SCCS
T ss_pred CCHHHHHHHHHHHHHCCCee-eEEec--CCCc
Confidence 89999999999999999885 46666 6663
No 31
>2qcq_A Bone morphogenetic protein 3; BMP, TGF-beta, signaling protein; 2.21A {Homo sapiens}
Probab=46.54 E-value=5.4 Score=24.14 Aligned_cols=18 Identities=28% Similarity=1.128 Sum_probs=15.1
Q ss_pred Ccccch-------hhhhccCCCCCC
Q psy10252 1 MGWLAW-------ERFRCNTDCKND 18 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~ 18 (85)
+||+.| ++++|.+.|+..
T Consensus 20 lGW~~WIiaP~~y~a~yC~G~C~~p 44 (110)
T 2qcq_A 20 IGWSEWIISPKSFDAYYCSGACQFP 44 (110)
T ss_dssp TTCTTTEEECSEEECCEEECBCCSS
T ss_pred cCCcceEECCCceEeEEeEeECCCC
Confidence 699988 689999999864
No 32
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=44.31 E-value=25 Score=22.47 Aligned_cols=29 Identities=14% Similarity=0.357 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEecccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW 54 (85)
+|++.|.+|++.|.+.|... +.++. |++-
T Consensus 21 lt~eqI~kQI~YlL~qGw~p-~lEf~--d~~~ 49 (140)
T 1gk8_I 21 LTDEQIAAQVDYIVANGWIP-CLEFA--EADK 49 (140)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--CGGG
T ss_pred CCHHHHHHHHHHHHHCCCEe-eEEec--cCCc
Confidence 89999999999999999884 46766 6665
No 33
>2knq_A General secretion pathway protein H; GSPH, minor pseudopilin, methylation, transport protein, Pro transport; NMR {Escherichia coli}
Probab=42.85 E-value=34 Score=21.13 Aligned_cols=18 Identities=6% Similarity=0.375 Sum_probs=12.7
Q ss_pred ccccCceEEEeccc-----cccC
Q psy10252 40 YAAVGYEYINIDDC-----WLDK 57 (85)
Q Consensus 40 l~~~Gy~~~~iDdg-----W~~~ 57 (85)
+.+.||+++..|++ |+.-
T Consensus 42 i~~~gy~f~~~~~~~~~~~W~~l 64 (142)
T 2knq_A 42 FSDSAWRIMVPGKTPSAWRWVPL 64 (142)
T ss_dssp ECSSCEEEEECCSCSSSCCCEES
T ss_pred EeCCeEEEEEECCCCCCCCceEC
Confidence 34568999998874 7653
No 34
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=42.84 E-value=19 Score=21.97 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
+|++.|.+|++.|.+.|... +.++. |++-.
T Consensus 20 lt~eqI~kQI~Yll~qGw~p-~lEf~--d~~~~ 49 (109)
T 1rbl_M 20 LSDRQIAAQIEYMIEQGFHP-LIEFN--EHSNP 49 (109)
T ss_dssp CCHHHHHHHHHHHHHHTCEE-EEEEE--SCCCT
T ss_pred CCHHHHHHHHHHHHHCCCEE-EEEec--cCccc
Confidence 89999999999999988874 45665 55433
No 35
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=42.28 E-value=22 Score=21.74 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
+|++.|.+|++.|.+.|... +.++. |+.-.
T Consensus 22 lt~eqI~kQV~Yll~qGw~p-~iEf~--d~~~~ 51 (110)
T 1svd_M 22 MNAERIRAQIKYAIAQGWSP-GIEHV--EVKNS 51 (110)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--CGGGT
T ss_pred CCHHHHHHHHHHHHHCCCee-EEEec--cCCcc
Confidence 89999999999999998874 46665 65543
No 36
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=41.86 E-value=20 Score=22.23 Aligned_cols=24 Identities=17% Similarity=0.414 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceE
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEY 47 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~ 47 (85)
+|++.|.+|++.|.+.|... |.++
T Consensus 19 Lt~eqI~kQV~yll~qGw~~-~lE~ 42 (118)
T 3zxw_B 19 LSDAQIARQIQYAIDQGYHP-CVEF 42 (118)
T ss_dssp CCHHHHHHHHHHHHHHTCEE-EEEE
T ss_pred CCHHHHHHHHHHHHhCCCee-EEEe
Confidence 89999999999999988874 4555
No 37
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=39.08 E-value=25 Score=22.41 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEE
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYI 48 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~ 48 (85)
+|++.|.+|++.|.+.|.+. |.++.
T Consensus 14 ltdeqI~kQI~YlL~qGw~p-~lE~~ 38 (139)
T 1bxn_I 14 LTDEQITKQLEYCLNQGWAV-GLEYT 38 (139)
T ss_dssp CCHHHHHHHHHHHHHHTCEE-EEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeE-EEEec
Confidence 89999999999999988874 35544
No 38
>1lxi_A Bone morphogenetic protein 7; cystine-knot growth factor, hormone-growth factor complex; HET: NAG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1lx5_A* 1bmp_A* 1m4u_L* 2qcw_A 2r53_A
Probab=38.15 E-value=16 Score=23.04 Aligned_cols=34 Identities=18% Similarity=0.729 Sum_probs=21.0
Q ss_pred Ccccch-------hhhhccCCCCCCCCCcC---CHHHHHHHHHH
Q psy10252 1 MGWLAW-------ERFRCNTDCKNDPENCI---SERLFRTMADL 34 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~~~~~i---~e~~i~~~ad~ 34 (85)
|||..| ++++|.+.|+......+ +...|...+..
T Consensus 50 lGW~~WIiaP~gy~a~yC~G~C~~pl~~~~~~tnHaivq~l~~~ 93 (139)
T 1lxi_A 50 LGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHF 93 (139)
T ss_dssp HTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHH
T ss_pred CCCceeEECCCceeeeeeeeECCCCcccccCCCchHHHHHHHHh
Confidence 589877 48999999996433222 33444444443
No 39
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=37.90 E-value=30 Score=22.05 Aligned_cols=28 Identities=25% Similarity=0.520 Sum_probs=22.7
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
+|++.|.++++.|.+.|.+. +.++. |+.
T Consensus 14 ltd~qI~kQI~YlL~qGw~~-~iEf~--d~~ 41 (138)
T 4f0h_B 14 LTDEQIKKQIDYMISKKLAI-GIEYT--NDI 41 (138)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE--SCC
T ss_pred CCHHHHHHHHHHHHhCCCEE-EEEeC--CCC
Confidence 89999999999999988874 46665 554
No 40
>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structu by NIH, protein structure initiative, PSI; 1.95A {Chlorobium tepidum tls} SCOP: a.4.5.60 a.4.5.60
Probab=37.53 E-value=34 Score=22.09 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHcCcc--ccCceEEEeccccccCCCCCC
Q psy10252 23 ISERLFRTMADLVVSEGYA--AVGYEYINIDDCWLDKTRSFN 62 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~--~~Gy~~~~iDdgW~~~~~d~~ 62 (85)
++.+.|.+..+.|.+ .+. +.|++.+.+.+||+-..+..+
T Consensus 36 ~~~~~v~~~l~~L~~-~y~~~~rg~~l~~v~~gy~l~t~~~~ 76 (162)
T 1t6s_A 36 FTPSELQEAVDELNR-DYEATGRTFRIHAIAGGYRFLTEPEF 76 (162)
T ss_dssp CCHHHHHHHHHHHHH-HHHHHTCSEEEEEETTEEEEEECGGG
T ss_pred CCHHHHHHHHHHHHH-HhhhCCCCEEEEEECCEEEEEEcHHH
Confidence 567777777777754 234 679999999999986544333
No 41
>1w79_A D-alanyl-D-alanine carboxypeptidase; penicillin-binding, peptidoglycan, transpeptidase, antibiotic resistance, hydrolase; 1.8A {Actinomadura SP} SCOP: e.3.1.3 PDB: 1w8q_A 1w8y_A* 2vgj_A* 2vgk_A* 2xln_A* 2y5o_A* 2xdm_A* 2xk1_A* 2y4a_A* 2y55_A* 2y59_A* 2wke_A* 2y5r_A* 3zvt_A* 3zvw_A*
Probab=37.30 E-value=63 Score=24.17 Aligned_cols=35 Identities=31% Similarity=0.522 Sum_probs=27.1
Q ss_pred cCCHHHHHHHHHHHHHcCcccc-CceEEEeccccccCC
Q psy10252 22 CISERLFRTMADLVVSEGYAAV-GYEYINIDDCWLDKT 58 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~-Gy~~~~iDdgW~~~~ 58 (85)
.++.+.+.+.|+.|++.|++.. | -|++|+.++...
T Consensus 97 tL~~~~L~~La~~L~~~GI~~I~G--~lv~D~s~f~~~ 132 (489)
T 1w79_A 97 TLSAEDLDAMAAEVAASGVRTVRG--DLYADDTWFDSE 132 (489)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEECS--CEEEECTTSCSC
T ss_pred ccCHHHHHHHHHHHHHcCCcEEee--eEEEECCccCCC
Confidence 3888899999999988887753 3 478899887643
No 42
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=37.08 E-value=20 Score=25.82 Aligned_cols=29 Identities=21% Similarity=0.486 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHH--cCccccCceEEEeccc
Q psy10252 25 ERLFRTMADLVVS--EGYAAVGYEYINIDDC 53 (85)
Q Consensus 25 e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg 53 (85)
++.+.+.|+++.. .-|.++|.++|+||+.
T Consensus 159 ~~l~~~la~a~~~ei~~l~~aG~~~IQiDeP 189 (375)
T 1ypx_A 159 EKFANDLATAYQKAIQAFYDAGCRYLQLDDT 189 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEecCC
Confidence 4444444444432 2466789999999995
No 43
>2tgi_A Transforming growth factor ,beta 2; 1.80A {Homo sapiens} SCOP: g.17.1.2 PDB: 1tfg_A 1tgj_A 1ktz_A 1tgk_A 2pjy_A 3eo1_C 1kla_A 1klc_A 1kld_A 3kfd_A
Probab=35.49 E-value=21 Score=21.51 Aligned_cols=33 Identities=15% Similarity=0.350 Sum_probs=20.8
Q ss_pred Ccccchh-------hhhccCCCCCCCCCcCCHHHHHHHHHH
Q psy10252 1 MGWLAWE-------RFRCNTDCKNDPENCISERLFRTMADL 34 (85)
Q Consensus 1 mGW~SW~-------~~~~~~~~~~~~~~~i~e~~i~~~ad~ 34 (85)
+|| .|- +++|.+.|+.....--+...|+.....
T Consensus 28 lGW-~WIiaP~~y~A~yC~G~C~~p~~~~tnHa~vq~l~~~ 67 (112)
T 2tgi_A 28 LGW-KWIHEPKGYNANFCAGACPYLWSSDTQHSRVLSLYNT 67 (112)
T ss_dssp HCC-TTEEECSEEECCEEECBCCTTSSBCSHHHHHHHHHHH
T ss_pred cCC-ceEcCcCcEEEEEeeeECcCCccccchhhHHHHHHHh
Confidence 589 484 889999998754433345555554443
No 44
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=35.38 E-value=14 Score=20.66 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=12.9
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+.+||+..+|++|+..
T Consensus 73 L~~~G~~v~~l~GG~~~ 89 (94)
T 1wv9_A 73 LEAEGYEAMSLEGGLQA 89 (94)
T ss_dssp HHHHTCCEEEETTGGGC
T ss_pred HHHcCCcEEEEcccHHH
Confidence 45578887789999864
No 45
>3v39_A D-alanyl-D-alanine carboxypeptidase; peptidoglycan transpeptidase fold, endopeptidase, serine MOD hepes buffer molecule, hydrolase; HET: PGE; 1.45A {Bdellovibrio bacteriovorus}
Probab=34.34 E-value=56 Score=24.23 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=26.8
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEecccccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDCWLD 56 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~ 56 (85)
.++.+.+.+.|+.|++.|++.. +-+++|+.++.
T Consensus 79 ~l~~~~l~~la~~l~~~Gi~~I--~~Li~D~S~f~ 111 (418)
T 3v39_A 79 LFGRNMSYFLISELNRMKITKI--EKLTFDENFLL 111 (418)
T ss_dssp TCSHHHHHHHHHHHHHTTCCEE--EEEEECTTCCC
T ss_pred CcCHHHHHHHHHHHHHcCCceE--eEEEEECcccc
Confidence 3888999999999988887764 46889998775
No 46
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=34.32 E-value=34 Score=21.79 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEE
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYI 48 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~ 48 (85)
+|++.|.+|++.|.+.|... +.++.
T Consensus 14 ltdeqI~kQI~Yll~qGw~p-~iEf~ 38 (138)
T 1bwv_S 14 LTDEQIKKQIDYMISKKLAI-GIEYT 38 (138)
T ss_dssp CCHHHHHHHHHHHHHTTCEE-EEEEE
T ss_pred CCHHHHHHHHHHHHHCCCee-eEEec
Confidence 89999999999999988874 34544
No 47
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=33.58 E-value=25 Score=28.30 Aligned_cols=31 Identities=10% Similarity=0.096 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHH--cCccccCceEEEeccccc
Q psy10252 25 ERLFRTMADLVVS--EGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 25 e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdgW~ 55 (85)
++.+.+.|+++.. ..|.++|.++|+||+.-.
T Consensus 608 ee~~~dlA~A~r~Ei~~L~~AG~r~IQiDEPal 640 (789)
T 3ppg_A 608 KIQALQLGLALRDEVNDLEGAGITVIQVDEPAI 640 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcccch
Confidence 4555566665533 347789999999999543
No 48
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=32.90 E-value=14 Score=20.84 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=13.3
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+.+||+..+|++|+..
T Consensus 76 L~~~G~~v~~l~GG~~~ 92 (100)
T 3foj_A 76 LEQNGVNAVNVEGGMDE 92 (100)
T ss_dssp HHTTTCEEEEETTHHHH
T ss_pred HHHCCCCEEEecccHHH
Confidence 45678888999998763
No 49
>4ehx_A Tetraacyldisaccharide 4'-kinase; membrane protein, lipid A, P-loop, P-loop containing nucleoside triphosphate hydrolase; HET: EPE; 1.90A {Aquifex aeolicus} PDB: 4ehy_A* 4ehw_A
Probab=32.84 E-value=16 Score=25.79 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=13.4
Q ss_pred ccCceEEEeccccccC
Q psy10252 42 AVGYEYINIDDCWLDK 57 (85)
Q Consensus 42 ~~Gy~~~~iDdgW~~~ 57 (85)
..|++.+++|||-|..
T Consensus 129 ~~~~dviIlDDGfQh~ 144 (315)
T 4ehx_A 129 KLSPEVFILDDGFQHR 144 (315)
T ss_dssp HHCCSEEEEETCTTCT
T ss_pred ccCCcEEEecCccccc
Confidence 3578999999999964
No 50
>1zkz_A Growth/differentiation factor 2; glycoprotein, growth factor, cytokine, hormone-growth factor; 2.33A {Homo sapiens}
Probab=32.66 E-value=18 Score=21.73 Aligned_cols=33 Identities=21% Similarity=0.694 Sum_probs=20.7
Q ss_pred Ccccch-------hhhhccCCCCCCCCCcC---CHHHHHHHHH
Q psy10252 1 MGWLAW-------ERFRCNTDCKNDPENCI---SERLFRTMAD 33 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~~~~~i---~e~~i~~~ad 33 (85)
+||+.| ++++|.+.|+..-...+ +...|+....
T Consensus 20 lGW~~WIiaP~gy~a~yC~G~C~~~~~~~~~~tnHaivq~l~~ 62 (110)
T 1zkz_A 20 IGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVH 62 (110)
T ss_dssp TTCTTTEEECSEEEEEEEESBCCSSCCTTSCCCHHHHHHHHHH
T ss_pred cCCcceEECCCceEeEEeEeECCCCcccccCCCchHHHHHHHH
Confidence 699988 48899999987533222 3444544443
No 51
>2arp_A Inhibin beta A chain; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1nyu_B 1nys_B 1s4y_B* 2arv_A* 2b0u_A 2p6a_A 3b4v_A*
Probab=32.55 E-value=9.1 Score=23.27 Aligned_cols=18 Identities=28% Similarity=1.023 Sum_probs=14.0
Q ss_pred Ccccch-------hhhhccCCCCCC
Q psy10252 1 MGWLAW-------ERFRCNTDCKND 18 (85)
Q Consensus 1 mGW~SW-------~~~~~~~~~~~~ 18 (85)
|||+.| ++++|...|+..
T Consensus 23 lGW~~WIiaP~~y~a~yC~G~C~~p 47 (116)
T 2arp_A 23 IGWNDWIIAPSGYHANYCEGECPSH 47 (116)
T ss_dssp HTCTTTEEECSEEECCEEESCCCC-
T ss_pred cCCcccEECCCceEeEEEeeeCCCC
Confidence 589887 488999999864
No 52
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=32.54 E-value=59 Score=19.58 Aligned_cols=28 Identities=11% Similarity=-0.036 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEecccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW 54 (85)
-+|+.+++..+.+.+.|+. -+++.|.|-
T Consensus 59 ~~e~~l~~l~~~a~~~gl~----~~~i~DAG~ 86 (117)
T 1q7s_A 59 PDEETLIALLAHAKMLGLT----VSLIQDAGR 86 (117)
T ss_dssp SSHHHHHHHHHHHHHTTCC----EEEEEECSS
T ss_pred CCHHHHHHHHHHHHHCCCC----EEEEEECCC
Confidence 4889999999888777766 368889875
No 53
>1nza_A CUTA, divalent cation tolerance protein; cellular tolerance, monomer, structural genomics, RIKE structural genomics/proteomics initiative; 1.70A {Thermus thermophilus} SCOP: d.58.5.2 PDB: 1v6h_A
Probab=32.39 E-value=20 Score=21.52 Aligned_cols=59 Identities=24% Similarity=0.350 Sum_probs=37.8
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEec----c--ccccCCC-CCC--CceeecCCCCCCCHHHHHHHHhC
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINID----D--CWLDKTR-SFN--GRLQADAKRFPRGIADLSNYVST 85 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iD----d--gW~~~~~-d~~--G~~~~d~~kFP~Gl~~l~~~ih~ 85 (85)
+.+++.-++.|..|++.+|.+. ++|- . -|++.-. +.- =-+...+++|+. +...+..+|.
T Consensus 9 ~p~~~~A~~ia~~Lve~rLAAC----vni~p~i~S~Y~W~G~i~~~~E~~l~iKT~~~~~~~-l~~~i~~~Hp 76 (103)
T 1nza_A 9 VPSEEVARTIAKALVEERLAAC----VNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPK-LKERVKALHP 76 (103)
T ss_dssp ESSHHHHHHHHHHHHHTTSCSE----EEEEEEEEEEEESSSCEEEEEEEEEEEEEETTTHHH-HHHHHHHHSS
T ss_pred cCCHHHHHHHHHHHHHCCeEEE----EEecCCccEEEEECCEeeeceEEEEEEEECHHHHHH-HHHHHHHHCC
Confidence 3588999999999999999976 4444 3 4665311 000 013345667776 7777777773
No 54
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*
Probab=31.75 E-value=36 Score=19.44 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=17.7
Q ss_pred CCCCceeec------CCCCCCCHHHHHHHHh
Q psy10252 60 SFNGRLQAD------AKRFPRGIADLSNYVS 84 (85)
Q Consensus 60 d~~G~~~~d------~~kFP~Gl~~l~~~ih 84 (85)
+..|...++ ..+||+ |..|++|-+
T Consensus 59 ~~~g~~~l~~~~g~~~~~F~s-l~~LV~~y~ 88 (104)
T 1d4t_A 59 TETGSWSAETAPGVHKRYFRK-IKNLISAFQ 88 (104)
T ss_dssp CTTSCEEECBCTTSCCCCBSS-HHHHHHHHT
T ss_pred CCCCeEEEeccCCCCCcccCC-HHHHHHHHh
Confidence 345666665 579999 999999853
No 55
>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Probab=31.67 E-value=25 Score=20.05 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=18.0
Q ss_pred CCCceeecCCCCCCCHHHHHHHHh
Q psy10252 61 FNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 61 ~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
..|...+...+||+ |..|+++-+
T Consensus 59 ~~g~~~l~~~~F~s-l~~LV~~y~ 81 (96)
T 1jyr_A 59 GAGKYFLWVVKFNS-LNELVDYHR 81 (96)
T ss_dssp TTSCEESSSCEESS-HHHHHHHTT
T ss_pred CCCCEEECCcccCC-HHHHHHHHh
Confidence 45667777789999 999998853
No 56
>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} SCOP: e.3.1.3 PDB: 2j9p_A*
Probab=31.64 E-value=78 Score=23.37 Aligned_cols=33 Identities=27% Similarity=0.511 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHHHHcCcccc-CceEEEeccccccC
Q psy10252 23 ISERLFRTMADLVVSEGYAAV-GYEYINIDDCWLDK 57 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~-Gy~~~~iDdgW~~~ 57 (85)
++.+.+.+.++.|++.|++.. | -+++|+.++..
T Consensus 101 L~~~~l~~la~~l~~~Gi~~I~G--~l~~D~s~f~~ 134 (462)
T 1w5d_A 101 LLPSDFDKMAEILKHSGVKVIKG--NLIGDDTWHDD 134 (462)
T ss_dssp CCHHHHHHHHHHHHHTTCCEESS--CEEEECTTSCS
T ss_pred cCHHHHHHHHHHHHHcCCcEEee--eEEEECCccCC
Confidence 888889999999888777653 2 47899987754
No 57
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*
Probab=31.43 E-value=30 Score=19.98 Aligned_cols=22 Identities=23% Similarity=0.469 Sum_probs=17.8
Q ss_pred CCCceeecCCCCCCCHHHHHHHH
Q psy10252 61 FNGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 61 ~~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
..|....+..+|++ |..|+++-
T Consensus 59 ~~g~~~~~~~~F~s-l~~LI~~y 80 (104)
T 1mil_A 59 PEGVVRTKDHRFES-VSHLISYH 80 (104)
T ss_dssp TTSSEECSSCEESS-HHHHHHHH
T ss_pred CCCEEEECCceeCC-HHHHHHHH
Confidence 35677777889999 99999874
No 58
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=31.32 E-value=15 Score=21.39 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=12.3
Q ss_pred ccccCceEEEeccccc
Q psy10252 40 YAAVGYEYINIDDCWL 55 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~ 55 (85)
|+..||+.++|++|+.
T Consensus 76 L~~~G~~~~~l~GG~~ 91 (103)
T 3iwh_A 76 LEANGIDAVNVEGGMH 91 (103)
T ss_dssp HHTTTCEEEEETTHHH
T ss_pred HHHcCCCEEEecChHH
Confidence 4567888889999854
No 59
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=30.93 E-value=16 Score=20.68 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=13.2
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+.+||+..+|+.|+..
T Consensus 76 L~~~G~~v~~l~GG~~~ 92 (103)
T 3eme_A 76 LEANGIDAVNVEGGMHA 92 (103)
T ss_dssp HHTTTCEEEEETTHHHH
T ss_pred HHHCCCCeEEeCCCHHH
Confidence 45678888999998763
No 60
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=30.85 E-value=14 Score=21.35 Aligned_cols=17 Identities=6% Similarity=0.311 Sum_probs=13.1
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+.+||+..+|++||..
T Consensus 75 L~~~G~~v~~l~GG~~~ 91 (108)
T 3gk5_A 75 LSQLGLNIVDVEGGIQS 91 (108)
T ss_dssp HHTTTCCEEEETTHHHH
T ss_pred HHHcCCCEEEEcCcHHH
Confidence 45678888999998753
No 61
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=30.60 E-value=22 Score=25.66 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=26.1
Q ss_pred cCCHHHHHHHHHHHHH--cCccccCceEEEecccc
Q psy10252 22 CISERLFRTMADLVVS--EGYAAVGYEYINIDDCW 54 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdgW 54 (85)
.+|++.|.+..+.+++ .-.+++||+-|.|-.+-
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~ 176 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGAN 176 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcC
Confidence 5899999998887744 34567899999999864
No 62
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Probab=30.27 E-value=32 Score=19.72 Aligned_cols=23 Identities=22% Similarity=0.437 Sum_probs=18.1
Q ss_pred CCCceeecCCCCCCCHHHHHHHHh
Q psy10252 61 FNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 61 ~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
..|.+.....+||+ |..|+++-+
T Consensus 64 ~~g~~~l~~~~F~s-l~~LV~~y~ 86 (100)
T 1r1p_A 64 TKGNYFLWTEKFPS-LNKLVDYYR 86 (100)
T ss_dssp TTCCEESSSCEESS-HHHHHHHHT
T ss_pred CCCCEEEeCCEeCC-HHHHHHHHH
Confidence 45777777789999 999998854
No 63
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=29.91 E-value=68 Score=20.39 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=22.0
Q ss_pred cCCHHHHHHHHHHHH-----HcCccccCceEEEecccc
Q psy10252 22 CISERLFRTMADLVV-----SEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~-----~~gl~~~Gy~~~~iDdgW 54 (85)
|-+++.-...+..|. ++|+.+.||.|++=-||-
T Consensus 37 ~~~~~~~~~~~r~iq~~H~~~~gw~dIGYhflI~~dG~ 74 (167)
T 2f2l_A 37 CSTQAICVLRVRLLQTYDIESSQKCDIAYNFLIGGDGN 74 (167)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCCcCCcEEEcCCCE
Confidence 445544444444443 479999999999877773
No 64
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...
Probab=29.54 E-value=28 Score=20.73 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=18.8
Q ss_pred CCCCceeecCCCCCCCHHHHHHHHh
Q psy10252 60 SFNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 60 d~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
+..|...++..+||+ |..|+++-.
T Consensus 61 ~~~g~~~l~~~~F~s-l~eLV~~y~ 84 (117)
T 3ov1_A 61 DGAGKYFLWVVKFNS-LNELVDYHR 84 (117)
T ss_dssp CTTSCEESSSCEESS-HHHHHHHTT
T ss_pred CCCCeEEECCCCcCC-HHHHHHHHh
Confidence 346777777789998 999998743
No 65
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=29.42 E-value=18 Score=26.05 Aligned_cols=33 Identities=9% Similarity=0.137 Sum_probs=25.2
Q ss_pred cCCHHHHHHHHHHHHH--cCccccCceEEEecccc
Q psy10252 22 CISERLFRTMADLVVS--EGYAAVGYEYINIDDCW 54 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdgW 54 (85)
.+|++.|.+..+.+++ .-.+++||+-|.|-.+-
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~ 184 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGAN 184 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcC
Confidence 4788888888886643 34567899999999874
No 66
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=28.51 E-value=1.5e+02 Score=20.65 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=16.3
Q ss_pred cCCHHHHHHHHHHHHHcCcc
Q psy10252 22 CISERLFRTMADLVVSEGYA 41 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~ 41 (85)
+.+.+.+++.++++++.||+
T Consensus 56 ~~d~~~~~~~~~~ak~~Gl~ 75 (334)
T 1fob_A 56 SYDLDYNLELAKRVKAAGMS 75 (334)
T ss_dssp TTCHHHHHHHHHHHHHTTCE
T ss_pred ccCHHHHHHHHHHHHHCCCE
Confidence 45788899999998887776
No 67
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=28.42 E-value=85 Score=18.94 Aligned_cols=28 Identities=14% Similarity=-0.185 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 24 SERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 24 ~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
+|+.+++..+.+.+.|+. -+++.|.|-.
T Consensus 63 ~e~el~~l~~~a~~~gl~----~~~i~DAG~T 90 (120)
T 1xty_A 63 SLDEIISRAKKAETMNLP----FSIIEDAGKT 90 (120)
T ss_dssp SHHHHHHHHHHHHHTTCC----EEEEECCSSS
T ss_pred CHHHHHHHHHHHHHCCCC----EEEEEcCCcc
Confidence 889999999988777766 3688898864
No 68
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=27.80 E-value=68 Score=21.44 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=25.4
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++.+.+.+.|+.+++ +++.|++.+++=.|
T Consensus 28 ~~~~~~i~~la~~i~~--l~~~G~~vviV~gG 57 (243)
T 3ek6_A 28 GIDPKVINRLAHEVIE--AQQAGAQVALVIGG 57 (243)
T ss_dssp SCCHHHHHHHHHHHHH--HHHTTCEEEEEECS
T ss_pred CCCHHHHHHHHHHHHH--HHHCCCeEEEEECC
Confidence 4789999999999976 67789999988775
No 69
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=27.66 E-value=18 Score=22.27 Aligned_cols=17 Identities=12% Similarity=0.038 Sum_probs=13.4
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+..||+.++|++||..
T Consensus 122 L~~~G~~v~~L~GG~~~ 138 (158)
T 3tg1_B 122 LKREGKEPLVLKGGLSS 138 (158)
T ss_dssp HHTTTCCEEEETTHHHH
T ss_pred HHhCCCcEEEeCCcHHH
Confidence 45578888999999864
No 70
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=27.66 E-value=60 Score=22.53 Aligned_cols=30 Identities=7% Similarity=0.042 Sum_probs=24.9
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++++.+.+.|+.+++ +.+.|++.+++=.|
T Consensus 68 ~ld~~~i~~la~~I~~--l~~~G~~vviV~Gg 97 (281)
T 3nwy_A 68 GLDPDVVAQVARQIAD--VVRGGVQIAVVIGG 97 (281)
T ss_dssp SCCHHHHHHHHHHHHH--HHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHH--HHHCCCeEEEEECC
Confidence 3789999999999876 67789999988753
No 71
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=27.46 E-value=30 Score=24.64 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=25.9
Q ss_pred CcCCHHHHHHHHHHHHH--cCccccCceEEEeccc
Q psy10252 21 NCISERLFRTMADLVVS--EGYAAVGYEYINIDDC 53 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg 53 (85)
..+|++.|.+..+.+++ .-.+++||+-|.|-.+
T Consensus 146 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 180 (363)
T 3l5l_A 146 REMTLDDIARVKQDFVDAARRARDAGFEWIELHFA 180 (363)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 35899999999887744 3456789999999985
No 72
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=27.28 E-value=75 Score=21.13 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=25.6
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++++.+.+.|+.++. +++.|++.+++=.|
T Consensus 26 ~~~~~~i~~~a~~I~~--l~~~G~~vvlV~gG 55 (240)
T 4a7w_A 26 GIDIHVLDHIAKEIKS--LVENDIEVGIVIGG 55 (240)
T ss_dssp SCCHHHHHHHHHHHHH--HHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHH--HHHCCCcEEEEECC
Confidence 3789999999999876 67789999998887
No 73
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=25.81 E-value=99 Score=18.70 Aligned_cols=29 Identities=14% Similarity=-0.020 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
-+|+.+++..+.+.+.|+. -+++.|.|-.
T Consensus 63 ~~e~el~~l~~~a~~~gl~----~~~i~DAG~T 91 (121)
T 1wn2_A 63 ESEEELFKLKAEAEKLGLP----NALIRDAGLT 91 (121)
T ss_dssp SSHHHHHHHHHHHHHTTCC----EEEEECTTCT
T ss_pred CCHHHHHHHHHHHHHCCCC----EEEEEcCCcc
Confidence 4889999998888777766 3678898864
No 74
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=25.76 E-value=59 Score=22.94 Aligned_cols=19 Identities=26% Similarity=0.230 Sum_probs=16.4
Q ss_pred CCHHHHHHHHHHHHHcCcc
Q psy10252 23 ISERLFRTMADLVVSEGYA 41 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~ 41 (85)
=|.+.+++.++++.++|++
T Consensus 74 Gt~~df~~lv~~aH~~Gi~ 92 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVR 92 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHCCCE
Confidence 3889999999999888776
No 75
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=25.63 E-value=91 Score=18.64 Aligned_cols=29 Identities=24% Similarity=0.093 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
-+|+.+++..+.+.+.|+. -+++.|.|-.
T Consensus 57 ~~e~~l~~l~~~a~~~gl~----~~~i~DAG~T 85 (115)
T 2zv3_A 57 NSEKELIDIYNKARSEGLP----CSIIRDAGHT 85 (115)
T ss_dssp SSHHHHHHHHHHHHHHTCC----EEEEEECC--
T ss_pred CCHHHHHHHHHHHHHcCCC----EEEEEeCCce
Confidence 3888899988888777765 3577888764
No 76
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=25.40 E-value=22 Score=25.36 Aligned_cols=59 Identities=12% Similarity=0.164 Sum_probs=37.8
Q ss_pred cCCHHHHHHHHHHHHH--cCccccCceEEEeccc--c---------ccCCCCCCCceeecCCCCCCCHHHHHHHH
Q psy10252 22 CISERLFRTMADLVVS--EGYAAVGYEYINIDDC--W---------LDKTRSFNGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg--W---------~~~~~d~~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
.+|++.|.+..+.++. .-.+++||+-|.|=.+ + .....|++|-=.-|..||+ ..+++.|
T Consensus 141 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~---~Eii~av 212 (358)
T 4a3u_A 141 ALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLL---KDVTERV 212 (358)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHH---HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHH---HHHHHHH
Confidence 3677778777775533 3356799999999885 2 1223467765556777884 4454444
No 77
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=25.09 E-value=1.2e+02 Score=18.31 Aligned_cols=31 Identities=10% Similarity=0.158 Sum_probs=23.0
Q ss_pred CcCCHHHHHHHHHHH------HHcCccccCceEEEec
Q psy10252 21 NCISERLFRTMADLV------VSEGYAAVGYEYINID 51 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l------~~~gl~~~Gy~~~~iD 51 (85)
+.++.+++...++.| ...||.=.|-+|+.|-
T Consensus 35 f~~~~~E~~~i~~~f~~~~~~~~~Gl~l~G~KY~~i~ 71 (125)
T 1ypr_A 35 LSLQPNEIGEIVQGFDNPAGLQSNGLHIQGQKFMLLR 71 (125)
T ss_dssp CCCCHHHHHHHHHHTTCTHHHHHHCEEETTEEEEEEE
T ss_pred CccCHHHHHHHHHhccCcchhccCCeEECCEEEEEEe
Confidence 448999999998854 4567877787777764
No 78
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*
Probab=24.95 E-value=37 Score=19.82 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=19.0
Q ss_pred CCCCceeecCCCCCCCHHHHHHHHh
Q psy10252 60 SFNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 60 d~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
+..|.+..+..+||+ |..|+++-+
T Consensus 66 ~~~g~~~l~~~~F~s-l~~LV~~y~ 89 (111)
T 2hdv_A 66 NAAGQCRVQHLHFQS-IFDMLEHFR 89 (111)
T ss_dssp CTTCCEEETTEEESS-HHHHHHHHT
T ss_pred cCCCCEEeCCceeCC-HHHHHHHHh
Confidence 345777778789999 999998854
No 79
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=24.65 E-value=82 Score=16.55 Aligned_cols=16 Identities=19% Similarity=0.293 Sum_probs=13.8
Q ss_pred cCCHHHHHHHHHHHHH
Q psy10252 22 CISERLFRTMADLVVS 37 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~ 37 (85)
.+|++.|.+.+..|.+
T Consensus 66 ~ls~~ei~~l~~yl~~ 81 (88)
T 3dmi_A 66 RLSDEEIANVAAYVLA 81 (88)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4899999999998876
No 80
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=24.35 E-value=16 Score=21.25 Aligned_cols=16 Identities=6% Similarity=0.312 Sum_probs=11.3
Q ss_pred ccccCceEEEeccccc
Q psy10252 40 YAAVGYEYINIDDCWL 55 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~ 55 (85)
|+.+||+..+|+.||.
T Consensus 110 L~~~G~~v~~l~GG~~ 125 (134)
T 3g5j_A 110 LSSLGVNVYQLEGGYK 125 (134)
T ss_dssp HHHTTCCCEEETTHHH
T ss_pred HHHcCCceEEEeCcHH
Confidence 3456777788888875
No 81
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=24.32 E-value=77 Score=21.70 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=22.9
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEec
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINID 51 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iD 51 (85)
.|+++.|++.++.|...| .||+.+.++
T Consensus 114 ~IS~dDi~rAik~L~~LG---~g~~v~~~~ 140 (234)
T 3cuq_A 114 DVSQDDLIRAIKKLKALG---TGFGIIPVG 140 (234)
T ss_dssp SCCHHHHHHHHHHHGGGB---TTCEEEEET
T ss_pred ccCHHHHHHHHHHHHhcC---CCeEEEEEC
Confidence 499999999999997654 479999888
No 82
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.23 E-value=67 Score=18.64 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=18.3
Q ss_pred CCCceeecCCCCCCCHHHHHHHHh
Q psy10252 61 FNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 61 ~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
..|...++..+||+ |..|+++-+
T Consensus 74 ~~g~~~l~~~~F~s-l~~LV~~y~ 96 (111)
T 2eo3_A 74 PNRRFKIGDQEFDH-LPALLEFYK 96 (111)
T ss_dssp TTTEEEETTCCBSS-HHHHHHHHT
T ss_pred CCCCEEECCcccCC-HHHHHHHHh
Confidence 35777777889999 999999854
No 83
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=24.19 E-value=32 Score=24.33 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=26.0
Q ss_pred CcCCHHHHHHHHHHHHH--cCccccCceEEEecccc
Q psy10252 21 NCISERLFRTMADLVVS--EGYAAVGYEYINIDDCW 54 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdgW 54 (85)
..+|++.|.+..+.+++ .-.+++|++-|.|-.+-
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~ 175 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAH 175 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 35899999998887643 24567899999998853
No 84
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.05 E-value=52 Score=19.49 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=18.4
Q ss_pred CCCceeecCCCCCCCHHHHHHHHh
Q psy10252 61 FNGRLQADAKRFPRGIADLSNYVS 84 (85)
Q Consensus 61 ~~G~~~~d~~kFP~Gl~~l~~~ih 84 (85)
..|....+..+|++ |..|++|-+
T Consensus 72 ~~g~~~l~~~~F~s-l~~LI~~y~ 94 (119)
T 2gsb_A 72 PNNQFMMGGRYYNS-IGDIIDHYR 94 (119)
T ss_dssp TTTEEEESSCCBSC-HHHHHHHHT
T ss_pred CCCCEEECCcccCC-HHHHHHHHh
Confidence 45777777889999 999999854
No 85
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=23.89 E-value=1.9e+02 Score=20.15 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEec
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINID 51 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iD 51 (85)
.+.+.+++.++..++.||+ |+||
T Consensus 57 ~~~~~~~~~~~~A~~~Glk------V~ld 79 (332)
T 1hjs_A 57 YNLDYNIAIAKRAKAAGLG------VYID 79 (332)
T ss_dssp TSHHHHHHHHHHHHHTTCE------EEEE
T ss_pred CCHHHHHHHHHHHHHCCCE------EEEE
Confidence 4778899999988887776 6666
No 86
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=23.88 E-value=24 Score=21.56 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=12.5
Q ss_pred ccccCceEEEeccccc
Q psy10252 40 YAAVGYEYINIDDCWL 55 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~ 55 (85)
|+.+||+..+|++|+.
T Consensus 94 L~~~G~~v~~l~GG~~ 109 (144)
T 3nhv_A 94 FAQLGFRVKELIGGIE 109 (144)
T ss_dssp HHHTTCEEEEEESHHH
T ss_pred HHHCCCeEEEeCCcHH
Confidence 4557888899999865
No 87
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=23.84 E-value=22 Score=20.95 Aligned_cols=17 Identities=12% Similarity=0.257 Sum_probs=12.7
Q ss_pred ccccCceEEEecccccc
Q psy10252 40 YAAVGYEYINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~~~~iDdgW~~ 56 (85)
|+.+||+..+|+.|+..
T Consensus 93 L~~~G~~v~~l~GG~~~ 109 (124)
T 3flh_A 93 LLSAGFEAYELAGALEG 109 (124)
T ss_dssp HHHHTCEEEEETTHHHH
T ss_pred HHHcCCeEEEeCCcHHH
Confidence 44578888899998753
No 88
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=23.78 E-value=1.1e+02 Score=18.40 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~ 55 (85)
-+|+.+++..+.+.+.|+. -+++.|.|-.
T Consensus 59 ~~e~~l~~l~~~a~~~gl~----~~~v~DAG~T 87 (117)
T 1rlk_A 59 NDLDEIMEIKRMADSMGIV----NEIVQDRGYT 87 (117)
T ss_dssp SSHHHHHHHHHHHHHHTCC----EEEEECCCSS
T ss_pred CCHHHHHHHHHHHHHCCCC----EEEEEeCCcc
Confidence 4888899988888777765 3577888854
No 89
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=23.64 E-value=53 Score=22.56 Aligned_cols=27 Identities=11% Similarity=0.343 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEecccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW 54 (85)
++++...+..+... ++||++|--=+.+
T Consensus 30 ~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 56 (327)
T 3eau_A 30 ITDEMAEHLMTLAY-----DNGINLFDTAEVY 56 (327)
T ss_dssp SCHHHHHHHHHHHH-----HTTCCEEEEETTG
T ss_pred CCHHHHHHHHHHHH-----HcCCCEEECcccc
Confidence 67777777776654 3677776544445
No 90
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=23.44 E-value=69 Score=18.44 Aligned_cols=27 Identities=19% Similarity=0.423 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHHHHcCccccCceEEEec
Q psy10252 24 SERLFRTMADLVVSEGYAAVGYEYINID 51 (85)
Q Consensus 24 ~e~~i~~~ad~l~~~gl~~~Gy~~~~iD 51 (85)
|++..++..+.++. -|..+||+-+++-
T Consensus 58 ndeqakelleliar-llqklgykdinvr 84 (96)
T 2jvf_A 58 NDEQAKELLELIAR-LLQKLGYKDINVR 84 (96)
T ss_dssp SHHHHHHHHHHHHH-HHHHHTCSEEEEE
T ss_pred ChHHHHHHHHHHHH-HHHHhCCCceEEE
Confidence 45555555554433 3667888877763
No 91
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.36 E-value=1.1e+02 Score=22.89 Aligned_cols=56 Identities=13% Similarity=0.142 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHcCccccCceEEEeccccccCC---CCCCCceeecCCCCCC--CHHHHHHHHhC
Q psy10252 24 SERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKT---RSFNGRLQADAKRFPR--GIADLSNYVST 85 (85)
Q Consensus 24 ~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~---~d~~G~~~~d~~kFP~--Gl~~l~~~ih~ 85 (85)
+=+.|.+..+.| +++|++.|.|=--..... -+..+-..+|+ +|.. .|+.|++.+|+
T Consensus 170 d~~gi~~~LdyL-----k~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~~H~ 230 (583)
T 1ea9_C 170 DLQGVIDHLDHL-----SKLGVNAVYFTPLFKATTNHKYDTEDYFQIDP-QFGDKDTLKKLVDLCHE 230 (583)
T ss_dssp CHHHHHHTHHHH-----HHHTCSEEEECCCSSCSSSSTTSCSCTTCCCT-TTCCHHHHHHHHHHHTT
T ss_pred CHHHHHHhhHHH-----HHcCCCEEEECCCccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHH
Confidence 334455555655 567888888765443321 01123334554 5543 58899998885
No 92
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=23.18 E-value=38 Score=24.86 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=35.3
Q ss_pred CcCCHHHHHHHHHHHHH--cCccccCceEEEecccc-----------ccCCCCCCC-ceeecCCCCC
Q psy10252 21 NCISERLFRTMADLVVS--EGYAAVGYEYINIDDCW-----------LDKTRSFNG-RLQADAKRFP 73 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdgW-----------~~~~~d~~G-~~~~d~~kFP 73 (85)
..+|++.|.+.++.++. .-.+++||+-|.|=.+- .....|++| .+..+..||+
T Consensus 158 r~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~ 224 (419)
T 3l5a_A 158 IAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLC 224 (419)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHH
Confidence 35899999998887744 34567899999999874 122235564 4435666664
No 93
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=23.03 E-value=1.1e+02 Score=20.24 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=24.1
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++.+.+.+.++.++. +.+.|++.|++=.|
T Consensus 27 ~~~~~~i~~~a~~I~~--l~~~G~~vVlVhGg 56 (247)
T 2a1f_A 27 GIDPAILDRMAVEIKE--LVEMGVEVSVVLGG 56 (247)
T ss_dssp SCCHHHHHHHHHHHHH--HHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHH--HHHCCCeEEEEECC
Confidence 3678899999998876 56789998888765
No 94
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.82 E-value=76 Score=19.88 Aligned_cols=24 Identities=0% Similarity=0.062 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 24 SERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 24 ~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
..+.+++..+.+. ..|+||+||..
T Consensus 94 ~~~~l~~~l~~l~------~~yD~viID~p 117 (224)
T 1byi_A 94 ESLVMSAGLRALE------QQADWVLVEGA 117 (224)
T ss_dssp CHHHHHHHHHHHH------TTCSEEEEECS
T ss_pred CHHHHHHHHHHHH------HhCCEEEEEcC
Confidence 4444555544442 25999999985
No 95
>1yzs_A Sulfiredoxin; PARB domain fold, oxidoreductase; NMR {Homo sapiens} SCOP: d.268.1.4 PDB: 2b6f_A*
Probab=22.71 E-value=86 Score=19.31 Aligned_cols=20 Identities=5% Similarity=0.172 Sum_probs=18.6
Q ss_pred cCCHHHHHHHHHHHHHcCcc
Q psy10252 22 CISERLFRTMADLVVSEGYA 41 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~ 41 (85)
.++++.+.+.++.|++.||+
T Consensus 40 ~~d~~kv~eL~eSI~~~Gl~ 59 (121)
T 1yzs_A 40 VLDPAKVQSLVDTIREDPDS 59 (121)
T ss_dssp CCCHHHHHHHHHHHHHCGGG
T ss_pred cCCHHHHHHHHHHHHhcCCC
Confidence 58999999999999999987
No 96
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1
Probab=22.60 E-value=40 Score=19.16 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=16.9
Q ss_pred CCCceeec------CCCCCCCHHHHHHHHh
Q psy10252 61 FNGRLQAD------AKRFPRGIADLSNYVS 84 (85)
Q Consensus 61 ~~G~~~~d------~~kFP~Gl~~l~~~ih 84 (85)
..|...++ ..+||+ |..|+++-+
T Consensus 59 ~~g~~~l~~~~g~~~~~F~s-l~~LV~~y~ 87 (103)
T 1i3z_A 59 KHGYYRIETDAHTPRTIFPN-LQELVSKYG 87 (103)
T ss_dssp TTSCEEECBCTTSCCCEESS-SHHHHHHTT
T ss_pred CCCeEEEeccCCCCCcccCC-HHHHHHHHh
Confidence 35666655 578999 999998853
No 97
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=22.00 E-value=52 Score=23.73 Aligned_cols=59 Identities=14% Similarity=0.246 Sum_probs=38.6
Q ss_pred cCCHHHHHHHHHHHHH--cCccccCceEEEeccc--cc---------cCCCCCCCceeecCCCCCCCHHHHHHHH
Q psy10252 22 CISERLFRTMADLVVS--EGYAAVGYEYINIDDC--WL---------DKTRSFNGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg--W~---------~~~~d~~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
.+|++.|.+.++.++. .-.+++||+-|.|=.+ +- ....|++|-=.-|..||+ ..+++.|
T Consensus 161 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~---lEVi~aV 232 (400)
T 4gbu_A 161 SLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFT---LEVVDAL 232 (400)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHH---HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHH---HHHHHHH
Confidence 4799989888886643 3457799999999874 31 123466765456777874 3444444
No 98
>3uc9_A Increased recombination centers protein 6; rossmann-fold, clathrin accessory factor; 1.80A {Saccharomyces cerevisiae}
Probab=21.80 E-value=1.7e+02 Score=19.97 Aligned_cols=51 Identities=8% Similarity=0.125 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEeccccccCCCCCCCceeecCCCCCCCHHHHHHHH
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCWLDKTRSFNGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~~~~d~~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
++++......+.+.. ....|++||.+|.+=....++.+|..+ |+..+..-|
T Consensus 143 ~~~~~~de~~e~~~~--~~~~GfE~V~~~~~~~~~~~ne~gE~~--------Gi~RI~E~L 193 (233)
T 3uc9_A 143 VEQDEIDELNEIWSN--AFTNVIEFVNWKRSKPTVNHNDYGEKL--------GLDRIQEII 193 (233)
T ss_dssp CCHHHHHHHHHHHTT--SSSSCEEEEECC----CCCBCTTSCBC--------HHHHHHHHH
T ss_pred cCCCchhhHHHHHHH--HHhcCeEEEEecCCCcccccccccchh--------CHHHHHHHH
Confidence 455555554444322 234699999998765444555555332 566555544
No 99
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=21.73 E-value=50 Score=21.35 Aligned_cols=16 Identities=13% Similarity=0.121 Sum_probs=11.9
Q ss_pred ccccCce-EEEecccccc
Q psy10252 40 YAAVGYE-YINIDDCWLD 56 (85)
Q Consensus 40 l~~~Gy~-~~~iDdgW~~ 56 (85)
|+ +||+ ..+||.||..
T Consensus 82 L~-~G~~~v~~l~GGW~~ 98 (230)
T 2eg4_A 82 LG-LGGLEVQLWTEGWEP 98 (230)
T ss_dssp HH-HTTCCEEEECSSCGG
T ss_pred HH-cCCceEEEeCCCCcc
Confidence 45 6774 6789999975
No 100
>1xw3_A Sulfiredoxin; retroreduction, sulfinic acid, peroxiredoxin, ATP, oxidoreductase; 1.65A {Homo sapiens} SCOP: d.268.1.4 PDB: 1xw4_X* 3cyi_A* 2rii_X 3hy2_X*
Probab=21.69 E-value=1e+02 Score=18.56 Aligned_cols=20 Identities=5% Similarity=0.172 Sum_probs=18.5
Q ss_pred cCCHHHHHHHHHHHHHcCcc
Q psy10252 22 CISERLFRTMADLVVSEGYA 41 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~ 41 (85)
.++++.|.+.++.+++.|++
T Consensus 29 ~~d~~kv~eL~~SI~~~Gl~ 48 (110)
T 1xw3_A 29 VLDPAKVQSLVDTIREDPDS 48 (110)
T ss_dssp CCCHHHHHHHHHHHHHCGGG
T ss_pred ccCHHHHHHHHHHHHhcCCC
Confidence 58999999999999999986
No 101
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=21.69 E-value=50 Score=23.49 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=25.4
Q ss_pred CcCCHHHHHHHHHHHHH--cCccccCceEEEeccc
Q psy10252 21 NCISERLFRTMADLVVS--EGYAAVGYEYINIDDC 53 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg 53 (85)
..+|++.|.+..+.++. .-.+++||+-|.|-.+
T Consensus 131 ~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a 165 (343)
T 3kru_A 131 RELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAA 165 (343)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred hhcCHHHHHHHHHHHHHHHhhccccCCceEEEecc
Confidence 35899999998887644 2356789999999964
No 102
>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}
Probab=21.40 E-value=55 Score=20.30 Aligned_cols=21 Identities=10% Similarity=0.357 Sum_probs=16.3
Q ss_pred CCceeecCC---CCCCCHHHHHHHH
Q psy10252 62 NGRLQADAK---RFPRGIADLSNYV 83 (85)
Q Consensus 62 ~G~~~~d~~---kFP~Gl~~l~~~i 83 (85)
.|...++.+ .||+ |..|++|-
T Consensus 73 ~G~y~I~~~~~~~F~S-L~eLV~yY 96 (125)
T 3maz_A 73 GQNYTIELEKPVTLPN-LFSVIDYF 96 (125)
T ss_dssp TTEEEECSSSCEEESS-HHHHHHHH
T ss_pred CCEEEEecCCCcCcCC-HHHHHHHH
Confidence 477777754 4999 99999984
No 103
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=21.33 E-value=59 Score=23.64 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=16.7
Q ss_pred CCcCCHHHHHHHHHHHHHcC
Q psy10252 20 ENCISERLFRTMADLVVSEG 39 (85)
Q Consensus 20 ~~~i~e~~i~~~ad~l~~~g 39 (85)
...|+.+.+.++.+.|++.|
T Consensus 162 ~~~Vspe~Fe~QL~~Lk~~G 181 (360)
T 4hd5_A 162 DLFVSPANFEAQMKHLKDNG 181 (360)
T ss_dssp GGEECHHHHHHHHHHHHHTT
T ss_pred CceeCHHHHHHHHHHHHHCc
Confidence 34689999999999998765
No 104
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=21.12 E-value=62 Score=22.74 Aligned_cols=27 Identities=11% Similarity=0.343 Sum_probs=16.9
Q ss_pred CCHHHHHHHHHHHHHcCccccCceEEEecccc
Q psy10252 23 ISERLFRTMADLVVSEGYAAVGYEYINIDDCW 54 (85)
Q Consensus 23 i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdgW 54 (85)
++++...+..+... ++||++|--=+.+
T Consensus 64 ~~~~~~~~~l~~Al-----~~Gi~~~DTA~~Y 90 (367)
T 3lut_A 64 ITDEMAEHLMTLAY-----DNGINLFDTAEVY 90 (367)
T ss_dssp SCHHHHHHHHHHHH-----HTTCCEEEEETTG
T ss_pred CCHHHHHHHHHHHH-----HcCCCEEECcccc
Confidence 67777777776654 3677766444444
No 105
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=21.02 E-value=35 Score=24.12 Aligned_cols=33 Identities=9% Similarity=0.185 Sum_probs=25.9
Q ss_pred CcCCHHHHHHHHHHHHH--cCccccCceEEEeccc
Q psy10252 21 NCISERLFRTMADLVVS--EGYAAVGYEYINIDDC 53 (85)
Q Consensus 21 ~~i~e~~i~~~ad~l~~--~gl~~~Gy~~~~iDdg 53 (85)
..+|++.|.+..+.+++ .-.+++||+-|.|-.+
T Consensus 132 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 132 KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 35899999998887744 3456789999999986
No 106
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=20.98 E-value=1.2e+02 Score=20.13 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=24.6
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++.+.+.+.++.++. +...|++.|++=.|
T Consensus 31 ~~~~~~i~~~a~~I~~--l~~~G~~vViV~Gg 60 (255)
T 2jjx_A 31 SFNSKRLEHIANEILS--IVDLGIEVSIVIGG 60 (255)
T ss_dssp SCCHHHHHHHHHHHHH--HHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHH--HHHCCCeEEEEECc
Confidence 3678899999999876 56778998888777
No 107
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=20.85 E-value=1.5e+02 Score=18.66 Aligned_cols=20 Identities=25% Similarity=0.587 Sum_probs=16.1
Q ss_pred HHcCccccCceEEEeccccc
Q psy10252 36 VSEGYAAVGYEYINIDDCWL 55 (85)
Q Consensus 36 ~~~gl~~~Gy~~~~iDdgW~ 55 (85)
.++|+.+.||.|++=-||--
T Consensus 63 ~~~Gw~DIGYnFlI~~dG~V 82 (150)
T 2xz8_A 63 ESNGYKDINYNFVAAGDENI 82 (150)
T ss_dssp HTTCCSSCSCSEEECTTSCE
T ss_pred HhCCCCCCCCcEEEcCCCeE
Confidence 35899999999988777743
No 108
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=20.58 E-value=1.3e+02 Score=19.95 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=24.1
Q ss_pred cCCHHHHHHHHHHHHHcCccccCceEEEeccc
Q psy10252 22 CISERLFRTMADLVVSEGYAAVGYEYINIDDC 53 (85)
Q Consensus 22 ~i~e~~i~~~ad~l~~~gl~~~Gy~~~~iDdg 53 (85)
.++.+.+.+.++.++. +...|++.|++=.|
T Consensus 26 ~~~~~~~~~~a~~I~~--l~~~G~~vVlVhGg 55 (252)
T 1z9d_A 26 GIDIPTVQAIAKEIAE--VHVSGVQIALVIGG 55 (252)
T ss_dssp SCCHHHHHHHHHHHHH--HHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHH--HHhCCCEEEEEECC
Confidence 3678899999998876 66789998888765
No 109
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B
Probab=20.44 E-value=96 Score=17.85 Aligned_cols=21 Identities=24% Similarity=0.230 Sum_probs=14.7
Q ss_pred CCceee-cCCCCCCCHHHHHHHH
Q psy10252 62 NGRLQA-DAKRFPRGIADLSNYV 83 (85)
Q Consensus 62 ~G~~~~-d~~kFP~Gl~~l~~~i 83 (85)
.|...+ ....||+ |..|++|-
T Consensus 73 ~g~~~~~~~~~F~s-l~~LV~~y 94 (118)
T 3s9k_A 73 PKRYYVAEKYVFDS-IPLLIQYH 94 (118)
T ss_dssp SCCEEEECSCCCSC-HHHHHHHH
T ss_pred CCCEEECCCcccCC-HHHHHHHh
Confidence 454444 3458999 99999874
No 110
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=20.19 E-value=42 Score=20.42 Aligned_cols=16 Identities=19% Similarity=0.418 Sum_probs=12.1
Q ss_pred ccccCc-eEEEeccccc
Q psy10252 40 YAAVGY-EYINIDDCWL 55 (85)
Q Consensus 40 l~~~Gy-~~~~iDdgW~ 55 (85)
|+.+|| +..+|+.|+.
T Consensus 120 l~~~G~~~v~~l~GG~~ 136 (161)
T 1c25_A 120 YPKLHYPELYVLKGGYK 136 (161)
T ss_dssp TTCCSSCCEEEETTHHH
T ss_pred ccccCCceEEEEcCCHH
Confidence 556788 5779999865
No 111
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=20.13 E-value=62 Score=22.61 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCccccCceEEEecccccc
Q psy10252 28 FRTMADLVVSEGYAAVGYEYINIDDCWLD 56 (85)
Q Consensus 28 i~~~ad~l~~~gl~~~Gy~~~~iDdgW~~ 56 (85)
+.+.|+.|.+.|..+ -++||.|=++
T Consensus 221 l~ela~~~~~lG~~~----AlnLDGGgSs 245 (285)
T 3ohg_A 221 LPHLATMMKAVGCYN----AINLDGGGST 245 (285)
T ss_dssp HHHHHHHHHHHTCSE----EEECCCGGGC
T ss_pred HHHHHHHHHHcCCCe----EEECCCCcce
Confidence 567788887767654 5999998553
No 112
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A
Probab=20.12 E-value=72 Score=18.68 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=17.2
Q ss_pred CCceeecCCCCCCCHHHHHHHH
Q psy10252 62 NGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 62 ~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
.|...++..+|++ |..|++|-
T Consensus 68 ~g~~~~~~~~F~s-l~~LV~~y 88 (114)
T 1wqu_A 68 DNLYRLEGEGFPS-IPLLIDHL 88 (114)
T ss_dssp SSSEESSSCCBSS-HHHHHHHH
T ss_pred CCEEEECCCCCCC-HHHHHHHH
Confidence 3667777889999 99999874
No 113
>1mwp_A Amyloid A4 protein; heparin binding, sugar binding protein; 1.80A {Homo sapiens} SCOP: d.170.2.1
Probab=20.06 E-value=1.1e+02 Score=18.20 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=15.3
Q ss_pred CCCceeecCC---CCCCCHHHHHHH
Q psy10252 61 FNGRLQADAK---RFPRGIADLSNY 82 (85)
Q Consensus 61 ~~G~~~~d~~---kFP~Gl~~l~~~ 82 (85)
..|+|++|++ ....+-..+.+|
T Consensus 21 ~~G~W~~D~~~~~~C~~~k~eIL~Y 45 (96)
T 1mwp_A 21 QNGKWDSDPSGTKTCIDTKEGILQY 45 (96)
T ss_dssp TTCCEEECTTSCCBCCCSHHHHHHH
T ss_pred cCCceeeCCCCcccccCChHHHHHH
Confidence 3699999988 455556666655
No 114
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=20.03 E-value=52 Score=19.54 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=17.0
Q ss_pred CCceeecCCCCCCCHHHHHHHH
Q psy10252 62 NGRLQADAKRFPRGIADLSNYV 83 (85)
Q Consensus 62 ~G~~~~d~~kFP~Gl~~l~~~i 83 (85)
.|...++..+||+ |..|+++-
T Consensus 70 ~g~y~~~~~~F~s-l~eLV~~y 90 (116)
T 2kk6_A 70 DNMYRFEGTGFSN-IPQLIDHH 90 (116)
T ss_dssp TTEEESSSCEESC-HHHHHHHH
T ss_pred CCEEEECCCEeCC-HHHHHHHH
Confidence 4667777789999 99999875
Done!