BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10256
(96 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
Length = 1376
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKTAR LDRE +RY+L AHVQDRD P WEC S I L LTD+NDNAPEF+ S ++ E
Sbjct: 490 LKTARKLDRETQSRYSLMAHVQDRDHPGWECSSQIELALTDLNDNAPEFSMNPYSVTLPE 549
Query: 62 NAEIGSLST----VNATIGVNR 79
+AE+G+L T +A IG+NR
Sbjct: 550 DAEVGTLVTKIHATDADIGINR 571
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE+ A Y L+ D PA + + + + DINDN PEF S AS+ E
Sbjct: 597 AKPLDREQKALYNLSVSATDLGHPALSNAATLVVNVQDINDNPPEFTSKHYFASVPEINA 656
Query: 65 IGS 67
IGS
Sbjct: 657 IGS 659
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE I+ Y L +D P L+ + ++D NDN P F +A + E
Sbjct: 804 VAVAGTLDRESISNYVLEVQARDHGVPTLTAYVLVNIEISDANDNPPVFTQQNYTAVVQE 863
Query: 62 NAEIG 66
+ +IG
Sbjct: 864 DKQIG 868
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E+ Y L D P ++ + +++TD NDN P+F SA I E
Sbjct: 699 LSLADTLDYERAKDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSYSARIRE 758
Query: 62 NAEIG 66
+A+ G
Sbjct: 759 DAQRG 763
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ A+ LDRE + + + P V+ I L + D NDN P F S S ++
Sbjct: 177 QLRLAKTLDREVRDAHLIAILAETDSSPPLTAVTEIVLHVQDENDNTPIFESNPYSFALA 236
Query: 61 ENAEIGS 67
EN E GS
Sbjct: 237 ENIEKGS 243
>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
Length = 3660
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LKT+R LDRE ARY+L AHVQDRD P WEC S I LTLTD+NDN P+F+ S ++
Sbjct: 1909 QLKTSRRLDRESQARYSLMAHVQDRDHPGWECSSQIELTLTDLNDNPPDFSMNPYSVTLP 1968
Query: 61 ENAEIGSLST----VNATIGVNR 79
E+AE+G+L T +A IG+NR
Sbjct: 1969 EDAEVGTLVTKIHATDADIGINR 1991
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE + L V+D+ PA + + +T+ D ND+APEF + I + E A
Sbjct: 278 AQRLDRETQDEHVLIVIVKDQGTPAKRNYATVVITVHDHNDHAPEFTTKIVQGKVFETAP 337
Query: 65 IGS 67
+G+
Sbjct: 338 VGT 340
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y L+ D P + + + + DINDN PEF S AS+ E
Sbjct: 2017 AKPLDRELKAVYNLSVSATDLGNPPLSNAATLIINVQDINDNPPEFTSKHYFASVPEINS 2076
Query: 65 IGS 67
IGS
Sbjct: 2077 IGS 2079
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE I+ Y L +D P L+ + ++D NDN P F +A + E
Sbjct: 2224 ISVAGTLDRESISNYVLEVQARDHGVPTLTAYVLVNIEISDANDNPPMFTQPNYTAVVQE 2283
Query: 62 NAEIG 66
+ ++G
Sbjct: 2284 DKQLG 2288
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E+ Y L D P ++ + +++TD NDN P+F +A I E
Sbjct: 2119 LSLADTLDYERARDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSYNARIRE 2178
Query: 62 NAEIG 66
+A+ G
Sbjct: 2179 DAQRG 2183
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E ++ + D+ P+ + + +++ D+NDN P+F S + E+A
Sbjct: 1188 KSLDHETLSHHHFTVVASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSYSCVLSEHATR 1247
Query: 66 GSLSTV 71
G TV
Sbjct: 1248 GQFVTV 1253
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ A+ LDRE + + + P V+ I L + D NDN P F S S ++
Sbjct: 1597 QLRLAKTLDRETRGAHLIAILAETDSSPPLTAVTEIVLHVQDENDNTPIFESNPYSFTLA 1656
Query: 61 ENAE 64
EN E
Sbjct: 1657 ENIE 1660
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEF 50
+KT LD EKI ++ + V D +P E + + + +TD+ND AP F
Sbjct: 614 IKTIMFLDHEKIPFFSFHVKVTDLGKPRLTSELTAEVRINITDVNDCAPAF 664
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LKTAR LDRE ++Y L AHVQDRD P WEC S I + +TD+NDN PEF+ S ++
Sbjct: 1822 QLKTARQLDRETQSKYQLTAHVQDRDHPGWECSSQIVIVVTDLNDNPPEFSLNPYSVTLP 1881
Query: 61 ENAEIGSLST----VNATIGVNR 79
E+AE+G+L T +A IGVNR
Sbjct: 1882 EDAEVGTLVTKIHATDADIGVNR 1904
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE +A + L V+D+ PA + + +T+ D ND+APEF S I + E A
Sbjct: 255 TAHKLDREALAEHVLIVIVKDQGTPAKRNYAKVIITVHDHNDHAPEFTSKIVQGKVYETA 314
Query: 64 EIGS 67
+G+
Sbjct: 315 TVGT 318
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
++ LDRE A Y L D+ +P+ + + + + DINDN PEF S AS+ E
Sbjct: 1930 SKPLDREVKALYNLTVRATDQGKPSLFNSAFLIVNVQDINDNPPEFTSKHYFASVPEINS 1989
Query: 65 IGS 67
+GS
Sbjct: 1990 VGS 1992
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE I+ Y L +D P L+ + ++D NDN P F +A + E
Sbjct: 2137 ISVAGTLDRESISNYVLEVQARDNGLPTLTAYVLVNIEISDANDNPPIFTIQNYTAVVQE 2196
Query: 62 NAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
+ +IG +A N +TF D R N
Sbjct: 2197 DKQIGYTLLKFEVTDADSAPNAAPYTF---DFRSGN 2229
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E+ Y L D P ++ + +++TD NDN P+F +A I E
Sbjct: 2032 LSLADTLDYERAKDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNPPQFTQNSYTARIRE 2091
Query: 62 NAEIG 66
+A+ G
Sbjct: 2092 DAQKG 2096
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E ++ + DR P+ + + +++ D+NDN P+F + + E+A
Sbjct: 1102 KSLDHETLSHHHFTVIASDRGVPSLSSTAHVWVSVLDMNDNPPKFEQPSYTCVLSEHAAR 1161
Query: 66 GSLSTVNAT-----IGVNRCGHTF-RGKDLRCYNL 94
G TV + I +R +T +G +L+ Y++
Sbjct: 1162 GQFVTVVSASDPDYIDHDRLTYTIAQGNELQTYDI 1196
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE + + + P V+ + L + D NDN P F S S +
Sbjct: 1510 ELRLAKTLDRELKDVHLIAILAETDPSPPLTAVTEVILHVQDENDNTPIFESNPYSFVLA 1569
Query: 61 ENAEIGS 67
EN E GS
Sbjct: 1570 ENIEKGS 1576
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASV-INSAS 58
+KT LD EKI ++ + V D +P E + + + + D+ND AP F N
Sbjct: 581 IKTIMHLDHEKIPFFSFHVKVTDLGKPRLTSETTAEVRIAVNDVNDCAPAFTQKEYNVTL 640
Query: 59 ILENAEIGSLSTVNAT 74
+L E ++ VNAT
Sbjct: 641 LLPTYENVAVIQVNAT 656
>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
Length = 2413
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LKTAR LDRE +++ L AHVQDRD P WEC S I +T+TD+NDN P+F+ S ++
Sbjct: 832 QLKTARQLDRETQSKFHLVAHVQDRDHPGWECSSQIEITITDLNDNPPDFSMNPYSVTLP 891
Query: 61 ENAEIGSLST----VNATIGVNR 79
E+AE+G+L T +A IG+NR
Sbjct: 892 EDAEVGTLVTKIHATDADIGINR 914
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y L D+ +P+ + + + + DINDN PEF S AS+LEN+
Sbjct: 940 AKPLDREVKAVYNLTVRATDQGKPSLSNSAFLVVNVQDINDNPPEFTSKHYFASVLENSS 999
Query: 65 IGS 67
IG+
Sbjct: 1000 IGT 1002
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE I+ Y L +D P+ L+ + ++D NDN P F S +A + E
Sbjct: 1147 ISVAGTLDRESISSYVLEVQARDHGSPSLSTYVLVNIEISDANDNPPLFTSNNYTAVVQE 1206
Query: 62 NAEIG 66
+ +IG
Sbjct: 1207 DKQIG 1211
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE + + + P V+ +TL + D NDN P F S S S+
Sbjct: 520 ELRLAKTLDRELKDVHLIAILAETDSSPPLTAVTDVTLHVQDENDNTPMFESNPYSFSLA 579
Query: 61 ENAEIGS 67
EN E GS
Sbjct: 580 ENIEKGS 586
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E ++ + D+ P+ + + +++ D+NDN P+F + + E+A
Sbjct: 112 KSLDHETLSHHHFTVIASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSYTCVLSEHATR 171
Query: 66 GSLSTVNAT-----IGVNRCGHTF-RGKDLRCYNL 94
G TV + I +R +T +G +L+ Y++
Sbjct: 172 GQFVTVVSASDPDYIDHDRLTYTIAQGNELQTYDI 206
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A +D E+ Y L D P ++ + +++ D NDN P+F + +A+I E
Sbjct: 1042 LYLADVVDYERAKDYFLTIQAVDGGTPPLSNLATVNISVADCNDNPPQFTANSYTATIRE 1101
Query: 62 NAEIG 66
+A+ G
Sbjct: 1102 DAQKG 1106
>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
terrestris]
Length = 3597
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P+WEC S + + ++D+NDNAP+F SA++ E
Sbjct: 1982 LKTVGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPE 2041
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 2042 DVEVGTLVTKVHATDNDIGINR 2063
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E + IG+
Sbjct: 431 LDRETIEEHVLTVMVKDQGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPIGA 490
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+I Y L H +D P ++ + + D NDN P F+ +A +
Sbjct: 2295 QITVAAPLDREEIGNYVLEVHARDSGIPRLSSFVMVNIEILDANDNPPLFSLSNYTAVVQ 2354
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
E+ +G +A I N +TF D R N
Sbjct: 2355 EDKPLGHTVLQFVVTDADIEPNAAPYTF---DFRSGN 2388
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P V+ + + + DINDN PEFAS + + + E
Sbjct: 2089 GKPLDRETKAMYNVTIQAVDQGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYA 2148
Query: 65 IGS 67
+G+
Sbjct: 2149 VGT 2151
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ R LDRE A + L V+D +P+ + + + + DIND+ PEF
Sbjct: 116 SGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEF 162
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P + + +T+ D NDNAP F+ V ASI E
Sbjct: 2191 ITIAEQLDFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIRE 2250
Query: 62 NAEIG 66
+A+IG
Sbjct: 2251 DAKIG 2255
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +T+ D+NDN P+F + S+ E+AE
Sbjct: 1261 RSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAER 1320
Query: 66 GSLSTV 71
G TV
Sbjct: 1321 GQFVTV 1326
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E I ++T + V D +P + E + + + +TD+ND P+F +A++
Sbjct: 740 IRTVMVLDHESIPKFTFHVKVSDLGKPKLSSETTAKVMIVVTDVNDCPPKFLENDYNATV 799
Query: 60 L 60
L
Sbjct: 800 L 800
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus impatiens]
Length = 4739
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P+WEC S + + ++D+NDNAP+F SA++ E
Sbjct: 3124 LKTVGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPE 3183
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 3184 DVEVGTLVTKVHATDNDIGINR 3205
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T + LD E+ +TL +DR +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 1044 IRTTQSLDFEERQVHTLTIVAKDRGEPSLSSETMVIIEMVDVNENLHAPVFDDFVVSASV 1103
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN IG+L T + G +R G+T RG D
Sbjct: 1104 FENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGD 1138
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E + IG+
Sbjct: 1573 LDRETIEEHVLTVMVKDQGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPIGA 1632
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE+ + Y LN V D +P ++ +T+ D+NDNAP+F + S I E A
Sbjct: 836 LDRERESEYFLNISVYDLGKPQKSASKMLPVTILDVNDNAPKFEKSLASFRISETA 891
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+I Y L H +D P ++ + + D NDN P F+ +A +
Sbjct: 3437 QITVAASLDREEIGNYVLEVHARDSGIPRLSSFVMVNIEILDANDNPPLFSLSNYTAVVQ 3496
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
E+ +G +A I N +TF D R N
Sbjct: 3497 EDKPLGHTVLQFVVTDADIEPNAAPYTF---DFRSGN 3530
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P V+ + + + DINDN PEFAS + + + E
Sbjct: 3231 GKPLDRETKAMYNVTIQAVDQGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYA 3290
Query: 65 IGS 67
+G+
Sbjct: 3291 VGT 3293
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ R LDRE A + L V+D +P+ + + + + DIND+ PEF
Sbjct: 1258 SGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEF 1304
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P + + +T+ D NDNAP F+ V ASI E
Sbjct: 3333 ITIAEQLDFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIRE 3392
Query: 62 NAEIG 66
+A+IG
Sbjct: 3393 DAKIG 3397
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 8 LDREKIARYTLNAHVQDR-----DQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE+ Y L QD D P +L+ +T+ D+NDNAP FA + I E+
Sbjct: 939 LDRERQEIYELRIRAQDNGGKGTDSPPLYSDALVRVTVDDVNDNAPSFALSTYTVKIRED 998
Query: 63 AEIGSLSTV 71
I ++ V
Sbjct: 999 VPIWTVVAV 1007
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +T+ D+NDN P+F + S+ E+AE
Sbjct: 2403 RSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAER 2462
Query: 66 GSLSTV 71
G TV
Sbjct: 2463 GQFVTV 2468
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 LDRE-KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L DR P + + L D+NDNAP F+ I + E A I
Sbjct: 359 LDRETAVQGYNLTLRATDRGVPQRYSYKFVPVHLADLNDNAPVFSREIYEVKVPETAPIN 418
Query: 67 S 67
+
Sbjct: 419 T 419
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEF 50
++T LD E I ++T + V D +P + E + + + +TD+ND P+F
Sbjct: 1882 IRTVMVLDHESIPKFTFHVKVSDLGKPKLSSETTAKVMIVVTDVNDCPPKF 1932
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P+WEC S + + ++D+NDNAP+F SA++ E
Sbjct: 3141 LKTIGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAPKFTMQTYSATLPE 3200
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 3201 DVEVGTLVTKVHATDDDIGINR 3222
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++ + LD E+ +TL +DR +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 1061 IRITQSLDFEERQMHTLTIVARDRGEPSLSSETMVIIDVVDVNENAHAPVFDDFVVSASV 1120
Query: 60 LENAEIGSLSTV------NATIGVNRCGHTFRGKD 88
EN +G+L T + G +R G+T RG D
Sbjct: 1121 FENQPVGTLVTTVRAKDADPLGGDSRIGYTIRGGD 1155
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E + IG+
Sbjct: 1590 LDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYETSPIGA 1649
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE+ + Y LN V D +P ++ +T+ D+NDNAP F + S I E A
Sbjct: 853 LDRERESEYFLNISVYDLGKPQKSASRMLPITILDVNDNAPRFDKSLASFRISETA 908
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I Y L H +D P ++ + + D NDN P F+ +A + E+ +G
Sbjct: 3461 LDREEIGNYVLEVHARDSGIPVLSSFVMVNIEVLDANDNPPLFSLSNYTAVVQEDKPLGH 3520
Query: 67 ---SLSTVNATIGVNRCGHTFRGKDLRCYN 93
+A I N +TF D R N
Sbjct: 3521 TVLQFVVTDADIEPNAAPYTF---DFRSGN 3547
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P ++ + + + DINDN PEFAS I + + E
Sbjct: 3248 GKPLDRETKAMYNVTIQALDQGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYA 3307
Query: 65 IGS 67
+G+
Sbjct: 3308 VGT 3310
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E+ Y L D P + + +T+ D NDNAP F+ V ASI E+A+
Sbjct: 3353 AEQLDFERARDYFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAK 3412
Query: 65 IG 66
IG
Sbjct: 3413 IG 3414
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+ R LDRE A + L V+D P+ + + + + DIND+ PEF + I
Sbjct: 1275 SGRKLDRENQAEHVLEVTVRDDGWPSLSSTTRVVIAVADINDHGPEFEQKFYTVQI 1330
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +T+ D+NDN P+F + S+ E+AE
Sbjct: 2420 RSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAER 2479
Query: 66 GSLSTV 71
G TV
Sbjct: 2480 GQFVTV 2485
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 LDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L DR P + + L D+NDNAP F+ I + E A I
Sbjct: 376 LDRETATQGYNLTLRAMDRGIPQRFSYKFVPVHLADLNDNAPVFSREIYEVKVPETAPIN 435
Query: 67 S 67
+
Sbjct: 436 T 436
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE + + + P ++ I+L + D ND+AP+F S S+
Sbjct: 2828 QITLVKPLDRENKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESNPYGISVA 2887
Query: 61 ENAEIGS 67
EN E G+
Sbjct: 2888 ENVEEGT 2894
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 8 LDREKIARYTLNAHVQDR-----DQPAWECVSLITLTLTDINDNAPEFA 51
LDRE+ Y L QD D P +L+ + + D+NDNAP FA
Sbjct: 956 LDRERQDVYELRIRAQDNGGKGADAPPLYSDALVRVMVDDVNDNAPTFA 1004
>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
mellifera]
Length = 3599
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P+WEC S + + ++D+NDNAP+F SA++ E
Sbjct: 1987 LKTIGQLDRETQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNAPKFTMQTYSATLPE 2046
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 2047 DVEVGTLVTKVHATDDDIGINR 2068
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E + IG+
Sbjct: 436 LDRETIEEHVLTVMVKDQGTPAKRNYARVVVTVHDHNDHAPEFISEIIQGKVYETSPIGA 495
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+I Y L H +D P ++ + + D NDN+P F+ +A +
Sbjct: 2300 QIIVAAPLDREEIGNYVLEVHARDSGIPVLSSFVMVNIEVLDANDNSPLFSLSNYTAVVQ 2359
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
E+ +G +A I N +TF D R N
Sbjct: 2360 EDKPLGHTVLQFVVTDADIEPNAAPYTF---DFRSGN 2393
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P ++ + + + DINDN PEFAS I + + E
Sbjct: 2094 GKPLDRETKAMYNVTIQALDQGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYA 2153
Query: 65 IGS 67
+G+
Sbjct: 2154 VGT 2156
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E+ Y L D P + + +T+ D NDNAP F+ V ASI E+A+
Sbjct: 2199 AEQLDFERARDYFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAK 2258
Query: 65 IG 66
IG
Sbjct: 2259 IG 2260
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ R LDRE A + L V+D P+ + + + + DIND+ PEF
Sbjct: 121 SGRKLDRENQAEHVLEVMVRDDGWPSLSSTTRVVIAVADINDHGPEF 167
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +T+ D+NDN P+F + S+ E+AE
Sbjct: 1266 RSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAER 1325
Query: 66 GSLSTV 71
G TV
Sbjct: 1326 GQFVTV 1331
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE + + + P ++ I+L + D ND+AP+F S S+
Sbjct: 1674 QITLIKPLDRESKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESNPYGISVA 1733
Query: 61 ENAEIGS 67
EN E G+
Sbjct: 1734 ENVEEGT 1740
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK Y L + C + + + D NDNAP F + S I E A IGS
Sbjct: 641 LDYEKTKFYNLTIAATNMASAKAHCN--VIVHVLDRNDNAPRFLQAVYSGEISEGATIGS 698
Query: 68 LSTVNAT 74
L N +
Sbjct: 699 LVLTNTS 705
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P WEC S + + ++D+NDNAP+F S+++ E
Sbjct: 1850 LKTVGQLDRETQAKYSLTAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMSTYSSTLPE 1909
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ EIG+L T V+AT IG+NR
Sbjct: 1910 DVEIGTLVTKVHATDDDIGINR 1931
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E++ IG+
Sbjct: 300 LDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYESSPIGT 359
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y + D+ P ++ + + + DINDN PEFAS + A + E
Sbjct: 1957 AKSLDRETKAMYNVTIQALDQGTPQLMGIASLIVNVQDINDNPPEFASKLYFAKVPEIYA 2016
Query: 65 IGS 67
+G+
Sbjct: 2017 VGT 2019
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+IA Y L H +D P ++ + + D NDN P F+ +A + E+ +G
Sbjct: 2170 LDREEIASYVLEVHARDNGIPMLSSFVMVNIEVLDANDNPPLFSLPNYTAVVQEDKPLGH 2229
Query: 67 ---SLSTVNATIGVNRCGHTFRGKDLRCYN 93
+A I N +TF D R N
Sbjct: 2230 TVLQFVVTDADIEPNADPYTF---DFRSGN 2256
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E+ Y L D P + + +T+TD NDNAP F+ V A + E
Sbjct: 2059 LTIAEQLDYERARDYFLTIQAIDGGIPPLSNHATVNITVTDSNDNAPIFSEVSYRAFVRE 2118
Query: 62 NAEIG 66
+A+ G
Sbjct: 2119 DAKTG 2123
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ AR LDRE + + + P ++ ITL + D ND+AP+F S + S+
Sbjct: 1537 QITLARPLDRELKDSHLIGVLAETDSSPPLTALAEITLQVLDENDHAPKFESNPYAISLA 1596
Query: 61 ENAEIGS 67
EN E G+
Sbjct: 1597 ENIEEGT 1603
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +++ D+NDN P+F + + E+AE
Sbjct: 1130 RSLDHESHESHHFTVIAMDRGVPSLSSTAHVWMSVIDMNDNPPKFEQPSYTCFLSEHAER 1189
Query: 66 GSLSTV 71
G TV
Sbjct: 1190 GQFVTV 1195
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTL----NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
DRE Y L +H DR++P V ++ +T+ DINDN P F ++ A + +A
Sbjct: 819 FDREVCDHYELIVEAKSHPPDREKPRVAHV-IVNVTILDINDNCPMFVNLPYYAVVSVDA 877
Query: 64 EIGSLST 70
+ G + T
Sbjct: 878 QKGDIIT 884
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD+EK Y D P + + + L D NDNAP F A++ E
Sbjct: 1645 ISTLVQLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNAPAFVDDRYEATVNE 1704
Query: 62 NAEIGS----LSTVNATIGVN 78
+A G+ L TV+ VN
Sbjct: 1705 DALPGTVVVKLITVDKDTDVN 1725
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P+WEC S + + ++D+NDN P+F SA++ E
Sbjct: 3124 LKTVGQLDRESQAKYSLTAHVQDRDKPSWECSSQLEILISDLNDNPPKFTMQTYSATLPE 3183
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 3184 DVEVGTLVTKVHATDDDIGINR 3205
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T + LD E+ +TL +DR +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 1045 IRTVQSLDFEERQVHTLTVVARDRGEPSLSSETMVIIEVVDVNENLHAPVFDDFVVSASV 1104
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN IG+L T + G +R G+T RG D
Sbjct: 1105 FENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGD 1139
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I + L V+D+ PA + + +T+ D ND+APEF S I + E + +G+
Sbjct: 1574 LDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVFETSPVGA 1633
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+IA Y L H +D P ++ + + D NDN P F+ +A +
Sbjct: 3437 QITVAAPLDREEIASYVLEIHARDSGVPMLSSFVMVNIEVLDANDNPPLFSLSNYTAVVQ 3496
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
E+ +G +A I N +TF D R N
Sbjct: 3497 EDKPLGHTVLQFVVTDADIEPNADPYTF---DFRSGN 3530
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE+ + Y LN V D +P ++ +T+ D+NDNAP+F + S I E A
Sbjct: 837 LDRERESEYFLNISVYDLGKPQKSASRMLPVTVLDVNDNAPKFEKSLASFRISETA 892
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P V+ + + + DINDN PEFAS + + + E
Sbjct: 3231 GKSLDRETKAMYNVTIQALDQGTPQLTSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYA 3290
Query: 65 IGS 67
+G+
Sbjct: 3291 VGT 3293
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ R LDRE A + L V+D +P+ + + + + DIND+ PEF
Sbjct: 1259 SGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEF 1305
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P + + +T+ D NDNAP F+ V AS+ E
Sbjct: 3333 ITIAEQLDYERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASVRE 3392
Query: 62 NAEIG 66
+A+IG
Sbjct: 3393 DAKIG 3397
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +T+ D+NDN P+F + S+ E+AE
Sbjct: 2404 RSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSEHAER 2463
Query: 66 GSLSTV 71
G TV
Sbjct: 2464 GQFVTV 2469
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 LDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE A+ Y L DR P + + L D+NDNAP F I + E A I
Sbjct: 360 LDRETAAQGYNLTLRAMDRGVPQKFSYKFVPVHLADLNDNAPVFNREIYEVKVPETAPIN 419
Query: 67 S 67
+
Sbjct: 420 T 420
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 8 LDREKIARYTLNAHVQDR-----DQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE+ Y L +D D P +L+ +T+ D+NDNAP FA + I E+
Sbjct: 940 LDRERQEIYELRIRARDNGGKGTDTPPLYSDALVRVTVDDVNDNAPTFALSSYTVKIRED 999
Query: 63 AEIGS-LSTVNAT 74
I + ++ V+AT
Sbjct: 1000 VPIWTVVAVVDAT 1012
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEF 50
++T LD E I ++T + V D +P + E + + + +TD+ND P+F
Sbjct: 1883 IRTVMVLDHESIPKFTFHVKVSDLGKPKLSSETTAKVMIVVTDVNDCPPKF 1933
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE ARY+L AHVQDRD+P WEC S + + ++D+NDNAP F S+++ E
Sbjct: 1807 LKTVGQLDRETQARYSLIAHVQDRDKPMWECSSQLEILISDLNDNAPRFTMQTYSSTLPE 1866
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 1867 DVEVGTLVTKVHATDDDIGINR 1888
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I R+ L V+D+ PA + + +T+ D ND+APEF S I + E + +G+
Sbjct: 257 LDREAIERHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYETSPVGT 316
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+IA Y L H +D P ++ + + D NDN P F+ +A +
Sbjct: 2120 QITVAAPLDREEIANYVLEVHARDSGIPMLSSFVMVNIEIMDANDNPPLFSLPNYTAVVQ 2179
Query: 61 ENAEIG 66
E+ +G
Sbjct: 2180 EDKSLG 2185
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE A Y + D+ P V+ + + + DINDN PEFAS + A + E
Sbjct: 1914 GKPLDRETKAMYNVTIQALDQGTPQLMGVASLIVNVQDINDNPPEFASKVYFARVPEIYA 1973
Query: 65 IGS 67
+G+
Sbjct: 1974 VGT 1976
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E+ Y L D P + + +T+TD NDNAP F+ V A++ E+A+
Sbjct: 2019 AELLDYERARDYFLTIQAVDGGIPPLSNHATVNITVTDSNDNAPIFSEVSYRAAVREDAK 2078
Query: 65 IG 66
IG
Sbjct: 2079 IG 2080
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + +++ D+NDN P+F + S+ E+AE
Sbjct: 1087 RSLDHETRESHHFTVIAMDRGVPSLSSTAHVWVSVIDMNDNPPKFEQPSYTCSLSEHAER 1146
Query: 66 GSLSTV 71
G TV
Sbjct: 1147 GQFVTV 1152
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ AR LDRE + + + P ++ I+L + D ND+AP+F S + S+
Sbjct: 1494 QITLARPLDRELKDSHLIGVLAETDSSPPLTALAKISLQVLDENDHAPKFESNPYAISLA 1553
Query: 61 ENAEIGS 67
EN E G+
Sbjct: 1554 ENIEEGT 1560
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK Y L+ V + V + + + D NDNAP F + S I E A IGS
Sbjct: 462 LDYEKTKFYNLS--VSATNMAGASAVCNVIVHVLDRNDNAPRFLQALYSGGISEGASIGS 519
Query: 68 LSTVNAT 74
L N +
Sbjct: 520 LVLTNTS 526
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTL----NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
DRE Y L +H DR++P V ++ +T+ DINDN P F ++ A + +A
Sbjct: 776 FDRETCDHYELIVEAKSHPPDREKPRVAHV-IVNVTILDINDNCPMFVNLPYYAVVSVDA 834
Query: 64 EIGSLST 70
+ G + T
Sbjct: 835 QKGDVIT 841
>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 3508
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y+L AHVQDRD+P WEC S + + ++D+NDNAP+F S+++ E
Sbjct: 1890 LKTVGQLDRETQAKYSLMAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMQTYSSTLPE 1949
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 1950 DVEVGTLVTKVHATDDDIGINR 1971
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y + D+ P ++ + + + DINDN PEFAS I A + E
Sbjct: 1997 AKPLDRETKAMYNVTIQALDQGTPQLMGIASLIVNVQDINDNPPEFASKIYFAKVPEIYA 2056
Query: 65 IGS 67
IG+
Sbjct: 2057 IGT 2059
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE I + L V+D+ PA + + +T+ D ND+ PEF S I + E + I
Sbjct: 338 KPLDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHQPEFISEIIQGKVYETSPI 397
Query: 66 GS 67
GS
Sbjct: 398 GS 399
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+IA Y L H +D P ++ + + D NDN P F+ +A +
Sbjct: 2203 QIIVAAPLDREEIASYVLEVHARDNGIPMLSSFVMVNIEILDANDNPPLFSLPNYTAIVQ 2262
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
E+ +G +A I N +TF D R N
Sbjct: 2263 EDKPLGHTVLQFMVTDADIEPNAEPYTF---DFRSGN 2296
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E+ Y L D P + + +T+TD NDNAP F+ V A + E+A+
Sbjct: 2102 AEQLDYERARDYFLTIQAVDGGIPPLSNHATVNITVTDSNDNAPIFSEVSYRAFVREDAK 2161
Query: 65 IG 66
IG
Sbjct: 2162 IG 2163
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ AR LDRE + + + P ++ I+L + D ND+AP+F S + S+
Sbjct: 1577 QITLARPLDRELKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESNPYAISLA 1636
Query: 61 ENAEIGS 67
EN E G+
Sbjct: 1637 ENIEEGT 1643
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E + DR P+ + + +++ D+NDN P+F + S+ E+AE
Sbjct: 1170 QSLDHETHESHHFTVIAMDRGVPSLSSTAHVWVSVIDMNDNPPKFEQPSYTCSLSEHAER 1229
Query: 66 GSLSTV 71
G TV
Sbjct: 1230 GQFVTV 1235
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD+EK Y D P + + + L D NDNAP F A++ E
Sbjct: 1685 ISTLVQLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNAPAFVDDRYEATVNE 1744
Query: 62 NAEIGSL 68
NA G++
Sbjct: 1745 NALPGTV 1751
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E I ++ + V D +P + E + + +T+TD+ND P+F+ + ++
Sbjct: 649 IRTVMLLDHETIPMFSFHVKVSDLGKPKLSSETTAKVMITVTDVNDCPPKFSKTDYNVTL 708
Query: 60 L 60
L
Sbjct: 709 L 709
>gi|242006694|ref|XP_002424182.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
gi|212507523|gb|EEB11444.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
Length = 4716
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKTA LDRE+ ++Y L AHVQDRD+P WEC S + + ++D+NDN P+F + SA++ E
Sbjct: 3164 LKTALPLDREEQSKYQLVAHVQDRDKPKWECSSEVYILISDLNDNPPQFEKEMYSATLPE 3223
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ +IG+L T ++AT IG+NR
Sbjct: 3224 DVQIGTLVTKLHATDKDIGINR 3245
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K A LDRE + + L V+D+D P+ + + + + D ND+APEF S I A + E
Sbjct: 1610 VKLAAPLDRETMEEHVLIVMVKDQDTPSKRNYAKVIVRVHDHNDHAPEFVSPIIQAKVFE 1669
Query: 62 NAEIGSL 68
+E+G++
Sbjct: 1670 TSEVGTI 1676
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE+ Y LN V D +P ++ +T+ DINDN P F + S I
Sbjct: 867 ELKVIGYLDRERTDEYLLNISVFDLGRPQKSSSKILPITILDINDNPPIFEKSVASFRIP 926
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ + VNAT
Sbjct: 927 ENEANGTAIFRVNAT 941
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ A Y L+ D+ P ++ + + + DINDN PEFA +I E+ I
Sbjct: 3272 KPLDREQKATYNLSIKAFDQGTPQLSQITKLLVLVLDINDNPPEFAYKTYYGTIPESEPI 3331
Query: 66 GS 67
G+
Sbjct: 3332 GT 3333
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L AR LDRE+ + + + + P+ ++ + L + D NDNAP F S +I
Sbjct: 2851 QLSLARPLDREESNFHNIGVLAESKANPSLAALTEVLLKVLDENDNAPRFESTPYECTIA 2910
Query: 61 ENAEIGS 67
EN E GS
Sbjct: 2911 ENIEEGS 2917
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE I+ Y L D P L+ L ++D NDN P F+ +A + E+ G
Sbjct: 3484 LDREMISSYVLEIQATDHGIPELSSSVLVNLEISDFNDNPPLFSQDNYTAVVQEDKPPGF 3543
Query: 67 ---SLSTVNATIGVNRCGHTFRGKDLRCYN---LFK 96
+A G N TF D R N +FK
Sbjct: 3544 VILKFHVTDADAGFNTSPFTF---DFRAGNEGLMFK 3576
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K LD E+ Y L D P + + +T+TD NDN P F + SA+I E
Sbjct: 3373 VKIVEPLDFERAKDYLLTIQATDGGVPPLSNHATVNITVTDSNDNPPVFIQMSYSATIRE 3432
Query: 62 NAEIG 66
+ ++G
Sbjct: 3433 DTQVG 3437
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE + ++L + D P + + ++++D+ND+APEF
Sbjct: 1297 TERKLDRENQSEHSLEITITDNGTPQLSSTTKVIISVSDVNDHAPEF 1343
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFA-SVINSAS 58
++T LD E I+ + + V D +P + E + + +T+ DIND P F + NS
Sbjct: 1925 IRTVMTLDHESISTFIFHVKVSDVGKPRLSSESTAKVQITVKDINDCPPHFQYNEYNSTL 1984
Query: 59 ILENAEIGSLSTVNAT 74
+L + +L VNAT
Sbjct: 1985 LLPTYKGIALIQVNAT 2000
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE A+Y L AHVQDRD+ +WEC S + + ++D+NDNAP F+ SA++ E
Sbjct: 3167 LKTVGQLDRESQAKYILTAHVQDRDKTSWECSSQLEILISDLNDNAPRFSMQSYSATLPE 3226
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+ E+G+L T V+AT IG+NR
Sbjct: 3227 DVEVGTLVTKVHATDDDIGINR 3248
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y ++ D+ P V+ + + + DINDN PEF S A + E
Sbjct: 3274 AKPLDRETKAMYNVSIQAMDQGTPQLSSVTFLIVNVQDINDNPPEFTSKYYFARVPEIDA 3333
Query: 65 IGS 67
+G+
Sbjct: 3334 VGT 3336
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D +P ++ +++ D+NDNAP+F + S +
Sbjct: 852 ELRLIGRLDREREDEYFLNITVYDLGKPQKSASRMLAVSVLDVNDNAPKFEKALASFRVS 911
Query: 61 ENAEIGSL----STVNATIGVN 78
E A G++ +T +A +G N
Sbjct: 912 EAALNGTIIFRANTTDADLGEN 933
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE I + L V+D+ PA + + +T+ D ND+AP F S I + E + IG
Sbjct: 1602 ALDRETIQEHILTVMVKDQGTPAKRNFARVLVTVHDHNDHAPTFISEIIQGKVFETSPIG 1661
Query: 67 SLSTVNATIGVNR 79
+ V I ++R
Sbjct: 1662 --TAVVQVIAIDR 1672
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
+++ + LD E+ +TL +D+ +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 1073 IRSLQKLDFEERQVHTLTIVAKDKGEPSLSSETILIIEVVDVNENLHAPVFNDFVISASV 1132
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN + +L T + G +R G++ RG D
Sbjct: 1133 SENQPLNTLVTQVKAKDADPPGGDSRIGYSIRGGD 1167
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+IA Y L H +D P ++ + + D NDN P FA + + E+ +G
Sbjct: 3487 LDREQIASYVLEVHAKDNGIPTLSNYVIVNIEVIDANDNPPLFAQNNYTTVVQEDKPLGY 3546
Query: 67 ---SLSTVNATIGVNRCGHTFRGKDLRCYN 93
+ +A N +TF D R N
Sbjct: 3547 AVLKFTVTDADAEPNAAPYTF---DFRSGN 3573
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 8 LDREKIARYTLNAHVQDR-----------DQPAWECVSLITLTLTDINDNAPEFASVINS 56
LDRE+ + Y L D+ D PA +L+ +++ D+NDNAP+FA +
Sbjct: 962 LDRERQSSYELRIRATDKNGGNDKGEPDFDNPALYSEALVRVSVDDVNDNAPKFALTSYT 1021
Query: 57 ASILENAEIGSLSTV 71
+ E+ + S+ V
Sbjct: 1022 VKVREDVPVWSVIAV 1036
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E + DR P+ + + LT+ D+NDN P+F + + E AE
Sbjct: 2443 RSLDHETADSHHFTVVAMDRGVPSLSSTAHVWLTVIDMNDNPPKFEQSSYNCFLSEEAER 2502
Query: 66 GSLSTV 71
G TV
Sbjct: 2503 GQFVTV 2508
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y + + P ++ ITL + D ND+AP+F S S ++ EN E G+
Sbjct: 2859 LDREVKDSYMIGVLAETDSSPPLTALAEITLQVLDENDHAPKFESNPYSIAVAENIEEGT 2918
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P + + +T+ D NDNAP F+ ASI E
Sbjct: 3376 VSIAEQLDYERAKDYFLTIQAIDGGVPPLTNHATVNITVLDSNDNAPMFSQASYRASIRE 3435
Query: 62 NAEIG 66
+A+ G
Sbjct: 3436 DAKAG 3440
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE + Y L DR P + + L D+NDNAP F++ I +
Sbjct: 375 IQVLKLLDREAAPQGYNLTLRAVDRGTPPRFSYKSVPVHLADLNDNAPIFSTEIYDVKVP 434
Query: 61 ENAEIGS 67
E A + S
Sbjct: 435 ETAPVNS 441
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E I + N V D +P + E + + +T++D+ND P+F +A++
Sbjct: 1916 IRTVMLLDHETIPEFQFNVKVSDLGKPKLSSESTAKVIITVSDVNDCPPKFQQSDYNATV 1975
Query: 60 L 60
L
Sbjct: 1976 L 1976
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E + Y L+ + +C + + + D NDNAP+F + + + E
Sbjct: 1804 ISTQERLDYEDVKFYNLSIAATSMSGASAQCN--VIVHVLDRNDNAPQFVQAVYTGQVSE 1861
Query: 62 NAEIGSL 68
A IGSL
Sbjct: 1862 AASIGSL 1868
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2 [Acyrthosiphon pisum]
Length = 4147
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASIL 60
LKTA LDRE +RY L AHVQDR++ WEC+S + +T+ DINDNAP F S N+AS+
Sbjct: 3140 LKTAVTLDRELQSRYNLEAHVQDREKSEWECISKVEITMLDINDNAPLFISNNNNTASLS 3199
Query: 61 ENAEIGS----LSTVNATIGVNR 79
E+A+IG+ + +A IG+NR
Sbjct: 3200 EDAQIGTIVIKMHATDADIGLNR 3222
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LDRE IAR+ L V+D+ P+ + + + +T+ D ND+APEF+S I + E
Sbjct: 1574 VSVQQPLDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFSSNIVQGRVFE 1633
Query: 62 NAEIGS 67
+G+
Sbjct: 1634 TTAVGT 1639
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE+++ Y L D P +L+ + + D+NDN P F+ SA + E
Sbjct: 3455 ITVAKPLDREQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFVHE 3514
Query: 62 NAEIG----SLSTVNATIGVNRCGHTF 84
+ + G LS +A + N T+
Sbjct: 3515 DKKPGWIVCQLSVTDADLEPNGGPFTY 3541
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE Y LN V D +P L+ + + D+NDNAP+ ++S +
Sbjct: 798 DLNVVGYLDRETRDEYELNVTVSDLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVS 857
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 858 ENARNGTV 865
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D +P +++ +T+ D NDNAP F + + I E+ +G
Sbjct: 3356 LDYERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGE 3415
Query: 68 L 68
+
Sbjct: 3416 V 3416
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ Y L V D W +LI + + D+NDNAPEF + LE+ I
Sbjct: 908 LDRERQELYELKVTVSDCAPEPWTLHTEALIRIIVDDVNDNAPEFLVQNYTVKALEDLPI 967
Query: 66 GSLSTV 71
GS+ +
Sbjct: 968 GSVVAI 973
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T LD E+ +TL D P + +T+ + D+N+N APEF S +A +
Sbjct: 1013 VRTTSELDFEQRQIHTLIVSAVDGGMPYLSSQTWLTIEIVDVNENIFAPEFGSFYATAFV 1072
Query: 60 LENAEIGSL-STVNATIG-----VNRCGHTFRGKDLRCY 92
EN G+L +TV+AT V+R G++ D Y
Sbjct: 1073 DENEPPGTLVTTVSATDADPPGDVSRVGYSIVDGDGLGY 1111
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
AR LD EK Y L V D + + + +++ DIN+ P+F+ + ++ ENAE
Sbjct: 1474 ARQLDWEKQKEYNLTVAVTDG---VYTTATQLFVSVKDINEYRPKFSQDLYEVNVTENAE 1530
Query: 65 IGS 67
IGS
Sbjct: 1531 IGS 1533
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LD E++ YTL D V L+++ +TD+ND APEF + SI E
Sbjct: 2313 LYAVDNLDYEQVQHYTLTVRATDSVSGVSAEV-LVSIMVTDVNDCAPEFYQDSYNISISE 2371
Query: 62 NAEIGSL 68
+A GS
Sbjct: 2372 SASFGSF 2378
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDREK A + L P ++ + + + D NDNAPEF + SA I
Sbjct: 2831 QITVAGLLDREKQAFHILGVFAYTESSPPLTALTEVYVKVLDENDNAPEFDNDFYSARIS 2890
Query: 61 ENAEIGSL 68
E G+L
Sbjct: 2891 ETIAEGTL 2898
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE + + L V D P + + + + D+NDNAPE
Sbjct: 1227 TGRKLDRETESEHILEVTVIDDGVPVLSSTTSVVIAVEDVNDNAPEM 1273
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE Y ++ D+ P ++ + + + D+NDN P F A++ E A
Sbjct: 3248 AKKLDRETCETYNISVKAIDQGSPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEIAP 3307
Query: 65 I 65
I
Sbjct: 3308 I 3308
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 8 LDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L+ D P + I + L D+NDNAP F + +I E A +
Sbjct: 335 LDRETAPKGYNLSLRAVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVN 394
Query: 67 S 67
S
Sbjct: 395 S 395
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
3 [Acyrthosiphon pisum]
Length = 4140
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASIL 60
LKTA LDRE +RY L AHVQDR++ WEC+S + +T+ DINDNAP F S N+AS+
Sbjct: 3133 LKTAVTLDRELQSRYNLEAHVQDREKSEWECISKVEITMLDINDNAPLFISNNNNTASLS 3192
Query: 61 ENAEIGS----LSTVNATIGVNR 79
E+A+IG+ + +A IG+NR
Sbjct: 3193 EDAQIGTIVIKMHATDADIGLNR 3215
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LDRE IAR+ L V+D+ P+ + + + +T+ D ND+APEF+S I + E
Sbjct: 1574 VSVQQPLDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFSSNIVQGRVFE 1633
Query: 62 NAEIGS 67
+G+
Sbjct: 1634 TTAVGT 1639
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE+++ Y L D P +L+ + + D+NDN P F+ SA + E
Sbjct: 3448 ITVAKPLDREQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFVHE 3507
Query: 62 NAEIG----SLSTVNATIGVNRCGHTF 84
+ + G LS +A + N T+
Sbjct: 3508 DKKPGWIVCQLSVTDADLEPNGGPFTY 3534
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE Y LN V D +P L+ + + D+NDNAP+ ++S +
Sbjct: 798 DLNVVGYLDRETRDEYELNVTVSDLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVS 857
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 858 ENARNGTV 865
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D +P +++ +T+ D NDNAP F + + I E+ +G
Sbjct: 3349 LDYERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGE 3408
Query: 68 L 68
+
Sbjct: 3409 V 3409
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ Y L V D W +LI + + D+NDNAPEF + LE+ I
Sbjct: 908 LDRERQELYELKVTVSDCAPEPWTLHTEALIRIIVDDVNDNAPEFLVQNYTVKALEDLPI 967
Query: 66 GSLSTV 71
GS+ +
Sbjct: 968 GSVVAI 973
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T LD E+ +TL D P + +T+ + D+N+N APEF S +A +
Sbjct: 1013 VRTTSELDFEQRQIHTLIVSAVDGGMPYLSSQTWLTIEIVDVNENIFAPEFGSFYATAFV 1072
Query: 60 LENAEIGSL-STVNATIG-----VNRCGHTFRGKDLRCY 92
EN G+L +TV+AT V+R G++ D Y
Sbjct: 1073 DENEPPGTLVTTVSATDADPPGDVSRVGYSIVDGDGLGY 1111
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
AR LD EK Y L V D + + + +++ DIN+ P+F+ + ++ ENAE
Sbjct: 1474 ARQLDWEKQKEYNLTVAVTDG---VYTTATQLFVSVKDINEYRPKFSQDLYEVNVTENAE 1530
Query: 65 IGS 67
IGS
Sbjct: 1531 IGS 1533
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDREK A + L P ++ + + + D NDNAPEF + SA I
Sbjct: 2824 QITVAGLLDREKQAFHILGVFAYTESSPPLTALTEVYVKVLDENDNAPEFDNDFYSARIS 2883
Query: 61 ENAEIGSL 68
E G+L
Sbjct: 2884 ETIAEGTL 2891
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LD E++ YTL D V L+++ +TD+ND APEF + SI E
Sbjct: 2306 LYAVDNLDYEQVQHYTLTVRATDSVSGVSAEV-LVSIMVTDVNDCAPEFYQDSYNISISE 2364
Query: 62 NAEIGSL 68
+A GS
Sbjct: 2365 SASFGSF 2371
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE + + L V D P + + + + D+NDNAPE
Sbjct: 1227 TGRKLDRETESEHILEVTVIDDGVPVLSSTTSVVIAVEDVNDNAPEM 1273
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE Y ++ D+ P ++ + + + D+NDN P F A++ E A
Sbjct: 3241 AKKLDRETCETYNISVKAIDQGSPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEIAP 3300
Query: 65 I 65
I
Sbjct: 3301 I 3301
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 8 LDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L+ D P + I + L D+NDNAP F + +I E A +
Sbjct: 335 LDRETAPKGYNLSLRAVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVN 394
Query: 67 S 67
S
Sbjct: 395 S 395
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDREK ++YTL AHV D+++ +W+C S I L ++D+NDN P F+ S S+ E
Sbjct: 3113 LKTVTYLDREKQSKYTLTAHVHDKERLSWKCSSQIELIISDLNDNPPVFSLPFYSVSLPE 3172
Query: 62 NAEIGSLST----VNATIGVNR 79
+ E+G+L T +A IG+NR
Sbjct: 3173 DVEVGTLVTKIHATDADIGINR 3194
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+R LDRE + + L + D P + + + + DINDNAPEF + S I +A
Sbjct: 1230 TSRKLDRETLDEHILEVQISDNGSPPLSSTTYVVVKIDDINDNAPEFEQISYSVQIPASA 1289
Query: 64 EI 65
+
Sbjct: 1290 DF 1291
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE+ + Y LN + D +P ++ +T+ D+NDNAP F + S +
Sbjct: 801 ELKVIGYLDRERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFERSLASFRVT 860
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 861 ENALNGT 867
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y L D+ P VS +T+ + DINDN PEFA+ A + E
Sbjct: 3220 AKPLDREIRAVYNLTVQAVDQGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDA 3279
Query: 65 IGS 67
+G+
Sbjct: 3280 VGT 3282
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P V+ + +T+TD NDNAP F+ + SA I E
Sbjct: 3322 ISIADMLDYERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSYSARIRE 3381
Query: 62 NAEIGS--LSTVNATIGVNRCGHT----FRGKDLRCYNL 94
+A+IG L + + +R G RG D + +
Sbjct: 3382 DAQIGDKILQVIATDLDSDRNGKVTYSIIRGDDREQFEI 3420
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE + YTL DR P E + + LTD+NDNAP F I +
Sbjct: 325 IEVLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVPVHLTDLNDNAPVFNKEIYEVKVP 384
Query: 61 ENAEIGS 67
E A + +
Sbjct: 385 ETAPVNT 391
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + Y L +D P +L+ + ++D NDN P FA + I E
Sbjct: 3427 VSVAEELDRETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNYTTVIQE 3486
Query: 62 NAEIG 66
+ IG
Sbjct: 3487 DKPIG 3491
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-----RDQPAWECVSLITLTLTDINDNAPEFASVINS 56
L + LDRE+ Y L D D P +L+ +++ DINDNAP+F+ +
Sbjct: 905 LAVSNTLDRERQDLYELRIRATDGGGKGPDNPPLYSEALVRISIDDINDNAPKFSLPAYT 964
Query: 57 ASILENAEIGSLSTV 71
I E+ GS+ V
Sbjct: 965 VKIREDIPKGSVVAV 979
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFA-SVINSAS 58
++T R LD E ++T + V D P E + + + +TD+ND P+F+ SV N
Sbjct: 1871 IRTIRLLDHETYDKFTFHVQVSDLGNPKLTSETTARVDIVVTDVNDCPPKFSQSVYNVTL 1930
Query: 59 ILENAEIGSLSTVNAT 74
+L + ++ VNAT
Sbjct: 1931 LLPTYKNVAVIQVNAT 1946
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + + L V+D PA + + + + D ND+ P F+ I + E+A +GS
Sbjct: 1562 LDRESLDEHILTVMVRDGGTPAKRNYARVRIIVHDHNDHVPHFSEQILVGKVYESAVVGS 1621
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
E+ A+GLDREK+ Y L V D + V+ +++ + D NDN P
Sbjct: 3011 EIYVAKGLDREKVPHYDLQVLVTDG---MFTDVTNVSVNILDANDNPP 3055
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDREK ++YTL AHV D+++ +W+C S I L ++D+NDN P F+ S S+ E
Sbjct: 3074 LKTVTYLDREKQSKYTLTAHVHDKERLSWKCSSQIELIISDLNDNPPVFSLPFYSVSLPE 3133
Query: 62 NAEIGSLST----VNATIGVNR 79
+ E+G+L T +A IG+NR
Sbjct: 3134 DVEVGTLVTKIHATDADIGINR 3155
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+R LDRE + + L + D P + + + + DINDNAPEF + S I +A
Sbjct: 1230 TSRKLDRETLDEHILEVQISDNGSPPLSSTTYVVVKIDDINDNAPEFEQISYSVQIPASA 1289
Query: 64 EI 65
+
Sbjct: 1290 DF 1291
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE+ + Y LN + D +P ++ +T+ D+NDNAP F + S +
Sbjct: 801 ELKVIGYLDRERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFERSLASFRVT 860
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 861 ENALNGT 867
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE A Y L D+ P VS +T+ + DINDN PEFA+ A + E
Sbjct: 3181 AKPLDREIRAVYNLTVQAVDQGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDA 3240
Query: 65 IGS 67
+G+
Sbjct: 3241 VGT 3243
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ Y L D P V+ + +T+TD NDNAP F+ + SA I E
Sbjct: 3283 ISIADMLDYERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSYSARIRE 3342
Query: 62 NAEIGS--LSTVNATIGVNRCGHT----FRGKDLRCYNL 94
+A+IG L + + +R G RG D + +
Sbjct: 3343 DAQIGDKILQVIATDLDSDRNGKVTYSIIRGDDREQFEI 3381
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE + YTL DR P E + + LTD+NDNAP F I +
Sbjct: 325 IEVLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVPVHLTDLNDNAPVFNKEIYEVKVP 384
Query: 61 ENAEIGS 67
E A + +
Sbjct: 385 ETAPVNT 391
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + Y L +D P +L+ + ++D NDN P FA + I E
Sbjct: 3388 VSVAEELDRETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNYTTVIQE 3447
Query: 62 NAEIG 66
+ IG
Sbjct: 3448 DKPIG 3452
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-----RDQPAWECVSLITLTLTDINDNAPEFASVINS 56
L + LDRE+ Y L D D P +L+ +++ DINDNAP+F+ +
Sbjct: 905 LAVSNTLDRERQDLYELRIRATDGGGKGPDNPPLYSEALVRISIDDINDNAPKFSLPAYT 964
Query: 57 ASILENAEIGSLSTV 71
I E+ GS+ V
Sbjct: 965 VKIREDIPKGSVVAV 979
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFA-SVINSAS 58
++T R LD E ++T + V D P E + + + +TD+ND P+F+ SV N
Sbjct: 1889 IRTIRLLDHETYDKFTFHVQVSDLGNPKLTSETTARVDIVVTDVNDCPPKFSQSVYNVTL 1948
Query: 59 ILENAEIGSLSTVNAT 74
+L + ++ VNAT
Sbjct: 1949 LLPTYKNVAVIQVNAT 1964
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + + L V+D PA + + + + D ND+ P F+ I + E+A +GS
Sbjct: 1580 LDRESLDEHILTVMVRDGGTPAKRNYARVRIIVHDHNDHVPHFSEQILVGKVYESAVVGS 1639
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
E+ A+GLDREK+ Y L V D + V+ +++ + D NDN P
Sbjct: 2972 EIYVAKGLDREKVPHYDLQVLVTDG---MFTDVTNVSVNILDANDNPP 3016
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LKT + LDRE YTL AHVQDR++P WEC S + + L D+NDNAP F + ++
Sbjct: 4277 QLKTLKPLDRETRPIYTLTAHVQDRERPQWECTSEVVIALMDVNDNAPSFNQDWYTFAVP 4336
Query: 61 ENAE----IGSLSTVNATIGVNR 79
E+AE +G + ++ + +NR
Sbjct: 4337 EDAELRTIVGKIHATDSDLALNR 4359
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LDREK A Y+LN V D QP ++ + +TD+NDN P F + S SI E
Sbjct: 1654 LRVAGQLDREKRAGYSLNVTVFDLGQPQKSAWRILPVIVTDVNDNPPRFDRPVISVSIAE 1713
Query: 62 NAEIGS 67
A+IG+
Sbjct: 1714 TAQIGT 1719
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE +A++ L V+D+ P+ + + + +TD ND+ PEF S + I E A
Sbjct: 2670 AEKLDRETMAQHLLTVSVKDQGTPSKRNFARLLIDVTDHNDHTPEFMSELVQVRIFETAA 2729
Query: 65 IGSLSTVNATIGVNR 79
+GS+ TV I +R
Sbjct: 2730 VGSVVTVMLAIDKDR 2744
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++ AR LD E + Y L +DR P+ + + + + D+N+N AP F + AS+
Sbjct: 1868 VRLARRLDFEDRSVYNLTVRAKDRGSPSLSSEAYLAVEVVDVNENLYAPRFEDFVTEASV 1927
Query: 60 LENAEIGSL-STVNAT 74
ENA G+L + V AT
Sbjct: 1928 RENAPPGTLVAKVTAT 1943
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+GLDRE + Y L D P+ ++T+ +TD NDN P+F+ + +AS+ E
Sbjct: 4387 VTVAKGLDRETVPSYNLTVSAIDLGTPSLLSTVVVTIVVTDCNDNPPQFSRKLYAASVAE 4446
Query: 62 NAEIGS-LSTVNAT---IGVN 78
++ IG+ + V AT IGVN
Sbjct: 4447 SSAIGAEILNVLATSLDIGVN 4467
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A+ LD E+ + Y LN + D + + + +T+ D+ND+AP F+ A +
Sbjct: 2563 KVYVAQPLDWEQQSSYLLNISITDGHNTIY---TQLEITVLDVNDHAPVFSEQHYRAEVS 2619
Query: 61 ENAEIGS-LSTVNAT 74
ENAE+G+ + T+NAT
Sbjct: 2620 ENAEVGAEIITLNAT 2634
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA--WECVSLITLTLTDINDNAPEF--ASVINSA 57
++T LDRE++AR V D +P + V+ +++ +TD+ND+ P+F + SA
Sbjct: 2985 VRTLAPLDREQLARVEFTVQVSDHGRPRRNSDQVARVSIVITDVNDSPPKFIGQQLPYSA 3044
Query: 58 SIL 60
S+L
Sbjct: 3045 SLL 3047
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASIL 60
L + LDRE I Y L +D P+ + L+ + +TD NDN P F+ V +A
Sbjct: 4597 LTVSGQLDRELITSYMLEVEARDNGLPSSLASNVLVAVEVTDANDNPPAFSQVNYTAIAQ 4656
Query: 61 ENAEIG 66
E+ +G
Sbjct: 4657 EDKPLG 4662
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E Y L+ + + C L+ + ++D+NDN+P F+ + +I E A G
Sbjct: 2879 GLDYETTKHYNLSISAMNMAGSSARC--LVHVHVSDVNDNSPTFSQELYEGTISEAAAAG 2936
Query: 67 SL 68
SL
Sbjct: 2937 SL 2938
>gi|241121657|ref|XP_002403288.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493397|gb|EEC03038.1| protocadherin fat, putative [Ixodes scapularis]
Length = 2933
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T+R LDRE+ R+ L AHVQD Q WEC S + + L+D+NDNAP F +A++ E
Sbjct: 1799 LRTSRLLDRERQPRFRLTAHVQDWGQWDWECTSAVEILLSDVNDNAPAFGQDAYTATVAE 1858
Query: 62 NAEIGSL-STVNAT---IGVNR 79
+ ++G+L + V+AT +G NR
Sbjct: 1859 DVDVGTLVAKVHATDRDLGFNR 1880
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE I+ Y L D P L+ + +D+NDN P FA SA + E
Sbjct: 2113 ISVAASLDREMISNYVLEVECTDGGTPPLSSKVLVNIEASDVNDNPPHFAQANYSAIVQE 2172
Query: 62 NAEIG 66
+G
Sbjct: 2173 GKPVG 2177
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE + Y +D P + + + + D+NDNAP FA A+ILE
Sbjct: 1592 VTTLVALDREAVPSYNFTVSARDDGLPPRSATTWVFVEVVDVNDNAPAFARPRYDAAILE 1651
Query: 62 NAEIGSL 68
+A G++
Sbjct: 1652 DAVPGTV 1658
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+ A + L D P ++ + + + D+NDN PEF+ A + E + +
Sbjct: 1907 RPLDREERATFNLTVQASDHGTPQLSSLATLLVVVQDVNDNPPEFSRKFYHAVVSEASAV 1966
Query: 66 G 66
G
Sbjct: 1967 G 1967
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K A+ LD E + Y L +D PA + + +++TD ND P F + +A + E
Sbjct: 2008 VKVAKPLDYEDVRDYFLTVLARDGGLPALSNQASVNVSVTDYNDCPPVFGLPVYNAVVRE 2067
Query: 62 NAEIG 66
+A +G
Sbjct: 2068 DARVG 2072
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ A Y L ++ + + +T+ + D NDNAP F S AS+ ENAE G
Sbjct: 1495 LDRERQAEYYLA--IRAETELSLVATVDVTVLVNDENDNAPMFDSASYRASVAENAEEG 1551
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LDRE +R+ V D +++ +T+TD+NDN P+FA +I
Sbjct: 1265 EIFTTKPLDRE--SRHLYLIPVSATDGGGRLAFTMVRVTVTDVNDNEPQFAVSEYRVNIQ 1322
Query: 61 ENAEIGS 67
N +G+
Sbjct: 1323 VNTTVGT 1329
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A+ LDREKIA+Y L AHVQD + ECVS I +T+ DINDNAP F+ SI E
Sbjct: 2970 LKVAKTLDREKIAKYKLYAHVQDGKEFIRECVSEIIITVNDINDNAPIFSLTNYRVSIQE 3029
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+A++ +L T V+AT G+NR
Sbjct: 3030 DAQLQTLVTKVHATDKDFGMNR 3051
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+++ Y LN V D PA ++ +T+TD NDN P + + +
Sbjct: 679 ELQIIGYLDRERLSEYILNITVYDLGHPAKSDSKILPITITDANDNPPVLQKSLATLRLT 738
Query: 61 ENAEIGSL----STVNATIGVN 78
ENA GS+ +A +G+N
Sbjct: 739 ENAPKGSIVYCAHATDADVGIN 760
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE I+ Y V+D +P V+ I + + DINDN PEF+ + + E
Sbjct: 3074 IKLEKNLDRETISLYNFTVKVEDFGKPILSSVANIVINILDINDNPPEFSLRQYKSHMYE 3133
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS + ++AT IGVN
Sbjct: 3134 NVTRGSEVCKIHATSKDIGVN 3154
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++ LDRE +Y L+ V+DR P +++ + + D+NDNAP F
Sbjct: 786 SKSLDREHKDKYELHIVVKDRGSPVLSTEAIVYILVDDVNDNAPIFG 832
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD EK +++ L A V+D+ P + I + + D ND+ PEF I + E+A I
Sbjct: 1419 QKLDFEKTSQHILIAFVKDQGTPGKRNYAKIIVNVHDHNDHYPEFTRKIIQSKAPESAAI 1478
Query: 66 GS 67
GS
Sbjct: 1479 GS 1480
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE A + L + D P + + +++ DINDN+P F
Sbjct: 1104 TERKLDRENQAEHILEVSISDNGSPILTSTTRVVVSVLDINDNSPVF 1150
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+D EK Y L D P + ++ + +T+ D+NDN P F I S+ E+ +
Sbjct: 3185 VDYEKSKFYFLTVQAIDGGSPPFSNIAYVNITIEDVNDNTPTFTQNIYRTSVREDISV 3242
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+KT +D E + R YTL D P + I + + +INDN P+F V +
Sbjct: 414 IKTTNLIDYETMRRNYTLLVRASDWGLPYRRQTEIAIDIIVQNINDNRPQFERVNCYGKV 473
Query: 60 LENAEIGS----LSTVNATIGVNRCGHTFRGKDLRCYNL 94
+++A IGS +S ++ +G + G + C+NL
Sbjct: 474 IKSASIGSEVFTISAIDLDVGDEISYRSISGNEDGCFNL 512
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ AR LDRE I+ Y L D P C S+ + + + D NDNAP F+ S +
Sbjct: 3284 ISLARPLDRETISDYVLEVQACDFGIPE-RCNSVQVNICILDANDNAPIFSQTNYSIVLQ 3342
Query: 61 ENAEIG 66
EN +G
Sbjct: 3343 ENRPLG 3348
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + +TD NDN P+F + I S +
Sbjct: 2659 ELILMQTLDREQNDSHYLVIVAETATLPVLFAYAEVYIHVTDENDNYPKFDNTIYSCEVA 2718
Query: 61 ENAE-IGSLSTVNAT 74
EN E + S+ V AT
Sbjct: 2719 ENTEKVASILKVTAT 2733
>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
Length = 4656
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + Y L AH QDR++ W C S I +TL DINDNAP F++ + S ++ E
Sbjct: 3193 VSVAAPLDRETRSTYRLTAHAQDRERSEWACSSEIEVTLDDINDNAPRFSAPLYSVTLPE 3252
Query: 62 NAEIGSL-STVNAT---IGVNR 79
+AE+G+L + V+AT +G NR
Sbjct: 3253 DAELGTLVAKVHATDDDLGENR 3274
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE+ + Y LN V D P L+ +T+ D+NDN P+F + S +
Sbjct: 847 ELKVIGYLDRERESEYYLNITVYDLGHPQRSASRLLPVTVLDVNDNPPKFEKTLASFRVT 906
Query: 61 ENA 63
ENA
Sbjct: 907 ENA 909
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE Y L +DR PA E +++ + + D NDN P F + + EN +G
Sbjct: 3512 LDRESKPAYVLEVRARDRGLPALEATAVVNVEVLDANDNPPLFEKTNYTEVVQENKPLG 3570
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L+TA LDRE A + L D QP S + LT+ D+NDN PEF
Sbjct: 3298 LRTA--LDRETRAEHRLLVRASDAGQPPRSATSTVRLTVADVNDNPPEF 3344
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A Y + ++ D +L+ + + D+NDNAP+F+ SA I E+ IG+
Sbjct: 958 LDRERRALYEIT--IRATDGGGLRAEALVRVAVDDVNDNAPKFSLSAYSARIREDVPIGT 1015
Query: 68 LSTV 71
L V
Sbjct: 1016 LVAV 1019
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ AR LD E+ Y L D P + I +T+ D NDN P F+ A + E
Sbjct: 3401 VSIARPLDYERRKEYYLTVQAVDGGSPPLSDHATINITIMDSNDNPPVFSQTSYGAKVRE 3460
Query: 62 NAEIG 66
+A +G
Sbjct: 3461 DAGVG 3465
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 8 LDREKIA-RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDR+ Y L D +P + +TL DINDN+P F+ I AS+ E A
Sbjct: 381 LDRQNAPLGYNLTLKATDAGKPPRSSYLTLPITLVDINDNSPVFSREIYEASLPETA 437
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E ++L D A+ ++L TLT+TD+ND APEF + A + E A +G
Sbjct: 2357 LDHETACEHSLTVRATDGVTGAFADLAL-TLTVTDVNDCAPEFDTDEYRAGVSEAAAVG 2414
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ ++ LDRE + Y L AHVQD W C S I + ++DIND AP+F + +I
Sbjct: 3098 ELRVSKALDRETQSSYLLTAHVQDSQHMEWSCTSSIRIMVSDINDCAPQFLKDNYTVAIQ 3157
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
E+AEIG+ L + AT +G+NR
Sbjct: 3158 EDAEIGTVLMKIYATDRDVGINR 3180
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ R LD E A+Y L+ QD PA +L+ +T+ D NDN P F ++ I E
Sbjct: 3305 VSVMRSLDYETQAQYMLSVVAQDGGTPALSSTTLLNVTVLDFNDNRPTFDKGRYNSVIRE 3364
Query: 62 NAEIG----SLSTVNATIGVN 78
+ ++G + +A GVN
Sbjct: 3365 DTKVGERILQIQATDADSGVN 3385
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE ++ L+ + D P V+ + + + DIND+ P+F V ILE
Sbjct: 1220 TDRRLDREIQDKFLLDVTITDDGTPPLSSVTQVLIHVGDINDHDPKFTQVQYRFKILEQE 1279
Query: 64 EI 65
E+
Sbjct: 1280 EL 1281
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LDRE + Y D +P +++TL+DINDNAP+F N ++I++ +
Sbjct: 3414 KSLDRELQSDYYFLVVAHDGGEPELNETVEVSITLSDINDNAPQFVKGGNYSAIVQEGK 3472
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A+ LD E+ + + A +D P I + + D ND+APEF + E
Sbjct: 1531 LQVAQPLDHEETREHIITALAKDSGWPGKRAYVRIHIHVADHNDHAPEFLQSSFEGKVFE 1590
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1591 SAALGT 1596
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL+T R LDREK + Y + + D A S++ +T+TD NDN P+F
Sbjct: 2584 ELRTKRTLDREKRSLYKIA--IVAEDGGARIGHSVVRVTVTDENDNPPQF 2631
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LDRE+ +Y L D +P + + + D+NDN P F + + I E
Sbjct: 793 LMLVEPLDRERTPKYVLTITAYDLGEPKKSASISVVVYVLDVNDNPPIFEKSLYTFKISE 852
Query: 62 NAEIGSL 68
+ G++
Sbjct: 853 SVNKGAV 859
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A+ LDRE+ ++Y + AHVQD + ECVS I +T+ DINDNAP F+ SI E
Sbjct: 3080 LKVAKLLDRERTSKYKILAHVQDGKEFIRECVSEIIITVNDINDNAPIFSMPNYRVSIQE 3139
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+A++ +L T V+AT G+NR
Sbjct: 3140 DAQLQTLVTKVHATDKDFGINR 3161
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE I+ Y L +D +P V+ I + + DINDN PEF+ S+ + E
Sbjct: 3184 IKLEKNLDRETISIYNLTLIAEDYGKPIMSSVANIVINILDINDNPPEFSLRQYSSHVHE 3243
Query: 62 NAEIG-SLSTVNAT---IGVNR--CGHTFRGKDLRCYNL 94
N G + TV+AT IGVN + G + R +N+
Sbjct: 3244 NVTQGFDVCTVHATSKDIGVNAEISYYIISGNEQRKFNI 3282
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+++ Y LN V D P ++ +T+TD NDN P + + +
Sbjct: 787 ELQIIGYLDRERLSEYILNITVYDLGHPTKSDSKILPITITDANDNPPVLQKSLATLRLT 846
Query: 61 ENAEIGS----LSTVNATIGVN 78
ENA GS + +A +G+N
Sbjct: 847 ENAPKGSVVYCVHATDADLGIN 868
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD EK +++ L A V+D+ P + I + + D ND+ PEF + I + + E+A I
Sbjct: 1527 QKLDFEKTSQHILIAFVKDQGTPGKRDYAKIIVNVHDHNDHYPEFTTKIIQSKVPESAAI 1586
Query: 66 GS 67
GS
Sbjct: 1587 GS 1588
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ AR LDRE I+ Y L D P L+ + + D NDNAP F+ S + E
Sbjct: 3394 ISLARPLDRETISDYALEVQACDLGIPERCDSVLVNVAVLDANDNAPVFSQANYSVVLQE 3453
Query: 62 NAEIG 66
N +G
Sbjct: 3454 NRPLG 3458
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE + + L + D P + + +++ DINDN+P F
Sbjct: 1212 TERKLDRENQSEHILEVSISDNGSPILTSTTRVVVSVLDINDNSPVF 1258
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
LDRE+ +Y L+ V+D P +++ + + D+NDNAP F
Sbjct: 897 LDREQTDKYELHIVVKDCGDPVLSAEAVVYILVDDVNDNAPIFG 940
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + + L D P + +++ + D NDN P+F ++ SI ENA G+
Sbjct: 2882 LDREVQSEFNLKVIATDNGHPKHDSKVPVSIKIIDYNDNGPQFKLPNDTISISENALPGT 2941
Query: 68 L 68
+
Sbjct: 2942 V 2942
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD EK Y L D P ++ + +++ D+NDN P F AS+ E+ I
Sbjct: 3295 LDYEKTKFYFLTVQAIDGGSPPLSNIAYVNISIDDVNDNTPTFTQNNYRASVKEDVNI 3352
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L A + P + + + +TD NDN P+F + I +A +
Sbjct: 2768 ELILMQTLDREQNELHYLVAVAETMTLPVLYAYADVYIHVTDENDNYPKFDNTIYNADVA 2827
Query: 61 ENAE-IGSLSTVNAT 74
EN + + S+ + AT
Sbjct: 2828 ENTDKVASILKITAT 2842
>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
Length = 4674
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE +Y L AHVQD + A ECVS I +T+ D+NDNAP F+ SI E
Sbjct: 3116 LKVIKVLDREICPKYKLVAHVQDGKELAHECVSEIIITVNDVNDNAPIFSMNQYIVSIPE 3175
Query: 62 NAEIGSLST-VNAT---IGVNR 79
+A++ +L T V+AT GVNR
Sbjct: 3176 DAQLQTLITKVHATDKDFGVNR 3197
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE+ Y LN V D P ++ +T+ D+NDNAP + + +
Sbjct: 823 ELKIIGYLDRERQNEYVLNITVYDLGYPMKSQSKMLPITIIDVNDNAPVLQKSLATFRLT 882
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A GVN
Sbjct: 883 ESARIGTVIYCLYATDADSGVN 904
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I + L +D P + + + + DINDN PEF+ + E
Sbjct: 3220 IRLEKNLDRETIPMFNLTVKAEDHGVPRLYSTANLLINILDINDNPPEFSLRQYLCQVHE 3279
Query: 62 NAEIG-SLSTVNAT---IGVN 78
NA IG + TV AT IGVN
Sbjct: 3280 NATIGVEVCTVYATSKDIGVN 3300
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TAR LDRE A + L + D P + I + + DINDN+PEF
Sbjct: 1248 TARKLDRENQAEHILEVAISDNGSPVLASTTRIVVNVLDINDNSPEF 1294
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LD E Y L DR P ++ + +++ D+NDN+P+F I ++LE
Sbjct: 3325 LTLNESLDYEMSKYYYLTIQAIDRGTPPLSNIAHVNISVLDVNDNSPKFVQDIYRVNVLE 3384
Query: 62 NAEIG-SLSTVNA 73
+ +G ++TV A
Sbjct: 3385 DIALGKQIATVKA 3397
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1565 LDFEKTAQHILVVFVKDQGTPGKRNYAKIIVNVHDHNDHYPEFTAKIIQSKVPESAAIGS 1624
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++ LDREK RY L+ +D P +L+ + + D+NDNAP F
Sbjct: 930 SKPLDREKQDRYALHITAKDGGTPTLSSEALVYILVDDVNDNAPVFG 976
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P + +++ + D NDNA +F IN ++ ENA G+
Sbjct: 2918 LDRELRSEYDLKVIATDNGHPKHDAKVPVSIKVVDCNDNAQQFKLPINKITVSENALPGT 2977
Query: 68 L 68
+
Sbjct: 2978 V 2978
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENA 63
AR LDRE A+Y L D P C S+ I + + D NDN P F+S + + EN
Sbjct: 3433 ARPLDRETKAKYNLEIQACDGGIP-QRCGSVQIIIVVLDTNDNNPVFSSPNYTIVLQENR 3491
Query: 64 EIG 66
+G
Sbjct: 3492 PLG 3494
>gi|194748038|ref|XP_001956456.1| GF24581 [Drosophila ananassae]
gi|190623738|gb|EDV39262.1| GF24581 [Drosophila ananassae]
Length = 2191
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE A+Y L AHVQD + EC S I +T+TD+NDN P F+ S+ E
Sbjct: 620 LKVASALDRETNAKYKLIAHVQDGKDFSQECFSEIIITVTDVNDNIPVFSMNQYRVSVPE 679
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T V+ G+NR
Sbjct: 680 DAQLNTLITKVHAVDKDFGINR 701
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE I+ + L +D P ++ + + + DINDN PEF+ S + E
Sbjct: 724 IKLEKNLDRESISLFNLTVKAEDYGIPKLHSIATVVVNILDINDNPPEFSMRQYSCKVFE 783
Query: 62 NAEIGS----LSTVNATIGVN 78
NA G+ + + IGVN
Sbjct: 784 NATQGTDVCKVYAASIDIGVN 804
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D +P + +T+ + D NDNAP F I S+LENA G+
Sbjct: 424 LDREVQSEYNFKVIASDNGRPKHDAKVPVTIKIVDYNDNAPAFKLPIERLSVLENALPGT 483
Query: 68 L 68
+
Sbjct: 484 V 484
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ +R LDRE I+ Y L D+ P + + + + D NDNAP F++ S + E
Sbjct: 934 IAISRPLDRETISHYNLEIQACDQGAPQRCNLVPVNVNVLDTNDNAPLFSNANYSIMLQE 993
Query: 62 NAEIG 66
N +G
Sbjct: 994 NRPLG 998
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + L + P + + + + D NDN P+F + S S+
Sbjct: 310 ELILQQTLDREHQDSHHLIVVAETATVPVLFAYADVLIDVNDENDNYPKFDNTFYSVSVA 369
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 370 ENSEKVNSLVKVSAT 384
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 3121 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPE 3180
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 3181 DAQLNTLITKVHAMDKDFGVNR 3202
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 3225 IRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 3284
Query: 62 NA----EIGSLSTVNATIGVNRCGHTF 84
NA E+ + + IGVN H F
Sbjct: 3285 NATHGTEVCKVYATSIDIGVNADIHYF 3311
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN+PEF +
Sbjct: 1253 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRV------YKV 1306
Query: 64 EIGSLSTVNATI 75
++ S +TVN +I
Sbjct: 1307 QVPSSATVNQSI 1318
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D P ++ +T+ D+NDN P + + +
Sbjct: 828 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 887
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A G+N
Sbjct: 888 ESARIGTVVHCLHATDADSGIN 909
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 3435 ISVSRPLDRETISHYTLEIQACDQGDP-QRCNSVPININILDTNDNAPIFSSSNYSVVLQ 3493
Query: 61 ENAEIG 66
EN +G
Sbjct: 3494 ENRLLG 3499
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 2925 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGT 2984
Query: 68 L 68
+
Sbjct: 2985 V 2985
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1570 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 1629
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L+ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 932 LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFG 981
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 2811 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2870
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2871 ENSEKVISLVKVSAT 2885
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L TA+ LD EK + YTL A+V R Q + + + +++ D+NDN P F +V
Sbjct: 457 LYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAK----VKISVQDMNDNDPIFENVNK 512
Query: 56 SASILENAEIGSL 68
SI EN GS
Sbjct: 513 VISINENNLAGSF 525
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 3121 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPE 3180
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 3181 DAQLNTLITKVHAMDKDFGVNR 3202
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 3225 IRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 3284
Query: 62 NA----EIGSLSTVNATIGVNRCGHTF 84
NA E+ + + IGVN H F
Sbjct: 3285 NATHGTEVCKVYATSIDIGVNADIHYF 3311
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN+PEF +
Sbjct: 1253 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRV------YKV 1306
Query: 64 EIGSLSTVNATI 75
++ S +TVN +I
Sbjct: 1307 QVPSSATVNQSI 1318
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D P ++ +T+ D+NDN P + + +
Sbjct: 828 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 887
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A G+N
Sbjct: 888 ESARIGTVVHCLHATDADSGIN 909
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 3435 ISVSRPLDRETISHYTLEIQACDQGDP-QRCNSVPININILDTNDNAPIFSSSNYSVVLQ 3493
Query: 61 ENAEIG 66
EN +G
Sbjct: 3494 ENRLLG 3499
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 2925 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGT 2984
Query: 68 L 68
+
Sbjct: 2985 V 2985
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1570 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 1629
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L+ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 932 LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFG 981
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 2811 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2870
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2871 ENSEKVISLVKVSAT 2885
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L TA+ LD EK + YTL A+V R Q + + + +++ D+NDN P F +V
Sbjct: 457 LYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAK----VKISVQDMNDNDPIFENVNK 512
Query: 56 SASILENAEIGSL 68
SI EN GS
Sbjct: 513 VISINENNLAGSF 525
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 3137 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPE 3196
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 3197 DAQLNTLITKVHAMDKDFGVNR 3218
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 3241 IRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 3300
Query: 62 NAEIGS-LSTVNAT---IGVNRCGHTF 84
NA G+ + V AT IGVN H F
Sbjct: 3301 NATHGTEVCKVYATSIDIGVNADIHYF 3327
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN+PEF +
Sbjct: 1250 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRV------YKV 1303
Query: 64 EIGSLSTVNATI 75
++ S +TVN +I
Sbjct: 1304 QVPSSATVNQSI 1315
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D P ++ +T+ D+NDN P + + +
Sbjct: 825 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 884
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A G+N
Sbjct: 885 ESARIGTVVHCLHATDADSGIN 906
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 3451 ISVSRPLDRETISHYTLEIQACDQGDP-QRCNSVPININILDTNDNAPIFSSSNYSVVLQ 3509
Query: 61 ENAEIG 66
EN +G
Sbjct: 3510 ENRLLG 3515
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 2941 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGT 3000
Query: 68 L 68
+
Sbjct: 3001 V 3001
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1567 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 1626
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L+ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 929 LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFG 978
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 2827 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2886
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2887 ENSEKVISLVKVSAT 2901
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L TA+ LD EK + YTL A+V R Q + + + +++ D+NDN P F +V
Sbjct: 454 LYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAK----VKISVQDMNDNDPIFENVNK 509
Query: 56 SASILENAEIGSL 68
SI EN GS
Sbjct: 510 VISINENNLAGSF 522
>gi|195354342|ref|XP_002043657.1| GM19756 [Drosophila sechellia]
gi|194127825|gb|EDW49868.1| GM19756 [Drosophila sechellia]
Length = 1638
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S + +T+ DINDN P F+ S+ E
Sbjct: 317 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEVIITVNDINDNTPIFSMAQYRVSVPE 376
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 377 DAQLNTLITKVHAMDKDFGVNR 398
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 421 IRLDKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 480
Query: 62 NA----EIGSLSTVNATIGVNRCGHTF 84
NA E+ + + IGVN H F
Sbjct: 481 NATHGTEVCKVYATSIDIGVNADIHYF 507
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 631 ISVSRPLDRETISHYTLEIQACDQGDP-QRCNSVPININILDTNDNAPIFSSANYSVVLQ 689
Query: 61 ENAEIGSL 68
EN +G +
Sbjct: 690 ENRPLGYI 697
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 121 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENALPGT 180
Query: 68 L 68
+
Sbjct: 181 V 181
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 7 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 66
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 67 ENSEKVISLVKVSAT 81
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 1330 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSMAQYRVSVPE 1389
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 1390 DAQLNTLITKVHAMDKDFGVNR 1411
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 1434 IRLDKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 1493
Query: 62 NA----EIGSLSTVNATIGVNRCGHTF 84
NA E+ + + IGVN H F
Sbjct: 1494 NATHGTEVCKVYATSIDIGVNADIHYF 1520
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 1644 ISVSRPLDRETISHYTLEIQACDQGDPQ-RCNSVPININILDTNDNAPIFSSANYSVVLQ 1702
Query: 61 ENAEIG 66
EN +G
Sbjct: 1703 ENRPLG 1708
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 1134 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENALPGT 1193
Query: 68 L 68
+
Sbjct: 1194 V 1194
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 1020 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVFIDVRDENDNYPKFDNTFYSASVA 1079
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 1080 ENSEKVISLVKVSAT 1094
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EKI+ + ++ D + V ++++++ D+ND PE S I + +I ENA G+
Sbjct: 509 LDYEKISSHDVSIRATDSLSGVYAEV-VLSVSIMDVNDCYPEIESDIYNITIPENASFGT 567
Query: 68 -LSTVNAT 74
+ +NAT
Sbjct: 568 QILKINAT 575
>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
Length = 3884
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 2316 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSMAQYRVSVPE 2375
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ G+NR
Sbjct: 2376 DAQLNTLITKVHAMDKDFGLNR 2397
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + D+NDN PEF+ S ILE
Sbjct: 2420 IRLDKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDVNDNPPEFSMRQYSCKILE 2479
Query: 62 NAEIGS-LSTVNAT---IGVNRCGHTF 84
NA G+ + V AT IGVN H F
Sbjct: 2480 NATHGTEVCKVYATSIDIGVNADIHYF 2506
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 2630 ISVSRPLDRETISHYTLEIQACDQGNP-QRCNSVPININILDTNDNAPIFSSANYSVVLQ 2688
Query: 61 ENAEIGSL 68
EN +G +
Sbjct: 2689 ENRRLGYI 2696
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN PEF + + +A
Sbjct: 448 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNGPEFDQRVYKVQVPSSA 507
Query: 64 EI 65
+
Sbjct: 508 AV 509
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ Y LN V D P ++ +T+ D+NDN P + + + E+A IG+
Sbjct: 30 LDRERQNEYVLNITVYDLGSPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGT 89
Query: 68 ----LSTVNATIGVN 78
L +A G+N
Sbjct: 90 VVHCLHATDADSGIN 104
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 765 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 824
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +TL + P + + + + + D NDN P+F + SAS+
Sbjct: 2006 ELILQQTLDREQQESHTLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2065
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2066 ENSEKVISLVKVSAT 2080
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I ++ ENA G+
Sbjct: 2120 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLAVFENALPGT 2179
Query: 68 L 68
+
Sbjct: 2180 V 2180
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 127 IRLNKPLDREKQDIYALHITAKDGGNPVLSSEALVYVLVDDVNDNAPVFG 176
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S E
Sbjct: 2882 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNTPIFSMAQYRVSAPE 2941
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 2942 DAQLNTLITKVHAMDKDFGVNR 2963
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 2986 IRLDKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCEILE 3045
Query: 62 NAEIGS-LSTVNAT---IGVNRCGHTF 84
NA G+ + V AT IGVN H F
Sbjct: 3046 NATHGTEVCKVYATSIDIGVNADIHYF 3072
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN+PEF +
Sbjct: 1106 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRV------YKV 1159
Query: 64 EIGSLSTVNATI 75
++ S +TVN +I
Sbjct: 1160 QVPSSATVNQSI 1171
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D P ++ +T+ D+NDN P + + +
Sbjct: 681 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 740
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A G+N
Sbjct: 741 ESARIGTVVHCLHATDADSGIN 762
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 3196 ISVSRPLDRETIPHYTLEIQACDQGNP-QRCNSVPININILDTNDNAPIFSSANYSVVLQ 3254
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFRGKDLRCYN 93
EN +G + +A N +TF D+R N
Sbjct: 3255 ENRPLGYVFLTFKITDADESPNTTPYTF---DIRSGN 3288
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 2777 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENALPGT 2836
Query: 68 L 68
+
Sbjct: 2837 V 2837
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1423 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 1482
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +TL + P + + + + + D NDN P+F + SAS+
Sbjct: 2663 ELILQQTLDREQQESHTLIVMAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2722
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2723 ENSEKVISLVKVSAT 2737
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 785 IRLNKQLDREKQDNYALHITAKDGGNPVLSSEALVYVLVDDVNDNAPVFG 834
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L TA+ LD EK + YTL A+V R Q + + + +++ D+NDN P F +V
Sbjct: 454 LYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAK----VKISVQDMNDNDPIFENVNK 509
Query: 56 SASILENAEIGSL 68
SI EN GS
Sbjct: 510 VISINENNLAGSF 522
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T R LDREK+A YTL DR P + + + + D+NDNAP F+ + SA++
Sbjct: 2700 EIRTTRPLDREKVALYTLKVKATDRGLPPKNTIVKVLINVLDVNDNAPRFSKIF-SATVA 2758
Query: 61 ENAEIG 66
ENA +G
Sbjct: 2759 ENAPVG 2764
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE A Y L+ D P V + +TL DINDN P F V A++ E
Sbjct: 618 LSTAVELDREDQASYLLHIQAADAGSPPLHSVGKVNITLWDINDNRPVFYPVQYFANVKE 677
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 678 NEPSGSYVTTVSAT 691
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE +Y L D P+ +T+ + D+NDN P F S I +I+
Sbjct: 2291 QLSLTETLDREVQEKYILLITATDSGTPSLSGTGTVTVMVDDVNDNVPVFTSSIFHTTIM 2350
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ +++ +A +GVN
Sbjct: 2351 EDAPTGTDVLLVNSSDADVGVN 2372
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F S+ E
Sbjct: 187 LVSTGGLDREVTPFYQLLIEVEDKGEPKKFGYMQVNVTIQDINDNPPIFEQDQYQTSVFE 246
Query: 62 NAEIGS 67
+A +GS
Sbjct: 247 DAAVGS 252
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ YTL D+ +P +T+ + D+NDN P F+ I I EN G+
Sbjct: 2088 LDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENILTGT 2147
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K A LDRE+I+ Y L V D +P A + + + + DIND+ P F + I
Sbjct: 404 IKVASVLDRERISSYNLTVSVSDNGKPMARSSFASLVIFVNDINDHPPIFQETVYRVDIS 463
Query: 61 ENAEIGS-LSTVNATIG 76
E+ GS + V+AT G
Sbjct: 464 EDIPKGSYIKGVSATDG 480
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE Y + D W + +T+ +TDINDNAP F+
Sbjct: 2802 DITISRPLNREDTNHYIVKVSAHDS---GWTVSTDVTVFITDINDNAPRFSRPSYYLDYP 2858
Query: 61 ENAEIGSLST-VNAT 74
E E+GSL T V+AT
Sbjct: 2859 ELTEVGSLVTRVSAT 2873
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E Y+L H D P+ + T+ L D+NDN P F + AS+ EN
Sbjct: 295 LDYESKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVDEN 354
Query: 63 AEIGSL-----------STVNATIGVNRCG 81
A+IG++ ST N I V+ G
Sbjct: 355 AQIGTVVALLTVSDADSSTANGNISVSILG 384
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LD E I +Y L +D+ P + + +T+ D+NDN P F A IL
Sbjct: 2596 KLSIRHSLDYEHIQKYVLWIEARDQGFPPYSSYEKLEITVLDVNDNHPVFDKDPFHAEIL 2655
Query: 61 EN 62
EN
Sbjct: 2656 EN 2657
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ Y L D +++T+T+ D DN P F+ + S +
Sbjct: 721 KITTLVPLDREEKTAYQLQVTAADGSGLRSHTPAIVTVTVIDTQDNPPVFSQKVYSFVMF 780
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TV+AT
Sbjct: 781 ENVGVGTVIGTVSAT 795
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE I Y L D P + + + L DINDN P A ++
Sbjct: 3437 QVSVAAELDRETIPVYNLTVLAVDTGTPPATGSTTVIVNLEDINDNGPTLTKTY--AEVM 3494
Query: 61 ENAEIGSLST 70
EN G+ T
Sbjct: 3495 ENQRAGTAVT 3504
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ +A LDRE + LN +D+ QP LI + +TD+ND P F S++
Sbjct: 510 VTSAALLDREIASEIVLNISAKDQGLQPKISYTKLI-VNITDVNDQVPTFTQSTYHVSLV 568
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ LS + +G N
Sbjct: 569 EHAPAGTELVVLSASDDDLGAN 590
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q + + +T+ D+ND+ P+F+ S I
Sbjct: 1771 DLIATKKLDRERRSKYSLLVRADDGKQSSDMT---LNITVKDVNDHTPKFSRATYSFDIP 1827
Query: 61 ENAEIGSL 68
E+ GS+
Sbjct: 1828 EDMVPGSI 1835
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D ++++++ D NDN+P F S +LEN IG
Sbjct: 1249 LDYESTSSYSLKIIAVDAGAVPLSSSCMLSISILDENDNSPIFPKSSLSVDVLENMRIGE 1308
Query: 68 L 68
L
Sbjct: 1309 L 1309
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
R LD E Y L A QD A + + D+NDNAP F + S S+ E
Sbjct: 1874 FNVTRPLDYETQQYYILTAKAQDGGGQA--STVRVYFNVLDVNDNAPIFNTTTYSTSVSE 1931
Query: 62 NAEIG-SLSTVNAT 74
+ G S+ TV AT
Sbjct: 1932 SLPPGSSIITVGAT 1945
>gi|167536805|ref|XP_001750073.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771402|gb|EDQ85069.1| predicted protein [Monosiga brevicollis MX1]
Length = 10110
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + YTL V DR PA + + +T+TD+NDNAP+F + S +
Sbjct: 5166 ELSLLLPLDRENASSYTLGVAVTDRGTPALNSTARVIITVTDVNDNAPQFTAETFSVYLA 5225
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA+ G +++ +A +GVN
Sbjct: 5226 ENAQAGDPVFTVTATDADVGVN 5247
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ LDRE Y L D Q A V T+T+TD+NDN+P F S +I
Sbjct: 5586 EIRVAQVLDRETTPGYVLTVRADDSVQLAQTSV---TITVTDVNDNSPVFVRPTYSTAIA 5642
Query: 61 ----ENAEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN+ + +S +A +G+N R + G +
Sbjct: 5643 ESAPENSPVLQVSATDADVGLNARLSYELAGSTM 5676
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A +D E + Y N VQD ++ +T+ +T++NDNAPEF + S +I EN+
Sbjct: 910 ANAVDHETVLFYRFNVRVQDSASSPLSALATVTVYITNVNDNAPEFRADTYSCTIAENSV 969
Query: 65 IGSL 68
G+
Sbjct: 970 AGTF 973
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
AR LD E + RY L HV D + + S + +T+ D+NDNAP F+ +A+ E
Sbjct: 5068 ARTLDYELVTRYVLQVHVSDGE---YTDSSSLVITVEDVNDNAPVFSRTTYTATFAETQS 5124
Query: 65 IGS 67
+G+
Sbjct: 5125 VGT 5127
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF----ASVINSASILENA 63
LDRE RY LN V D L+ +T+TD+NDNAP F A V ++ IL+ +
Sbjct: 2393 LDRETQDRYALN--VTATDLVGRTSAVLVNVTVTDLNDNAPVFNESVAWVEFTSPILDGS 2450
Query: 64 EIGSLSTVNATIGVNR 79
+ +L+ +A IGVNR
Sbjct: 2451 YVTTLNASDADIGVNR 2466
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ LDRE ++RY L A +D P +L+T+ + D+ND AP FA + + S+
Sbjct: 5703 QITVTAALDRETVSRYDLVALARDAGTPQRNATALVTVNVRDVNDRAPVFAQAMYTLSL 5761
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
DRE L V+D P+ + + +T+ LTD+NDN P FA + S+ ENA
Sbjct: 5279 FDRETQESIVLTVRVRDAGVPSLQSETTLTVHLTDVNDNPPVFAVATQNVSLSENAPGTL 5338
Query: 68 LSTVNAT---IGVN-----RCGHTFRGK 87
L T AT +G N +TF G+
Sbjct: 5339 LLTATATDADVGANAGIVYSLENTFSGR 5366
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE A Y+L A D P + +T++D+NDN P+F + + S+ E
Sbjct: 1009 IETTAPLDREAQASYSLVATAVDSGIPPRFTDVPVIVTVSDVNDNPPQFVTKSFTRSVPE 1068
Query: 62 NAEIGSL 68
NA G++
Sbjct: 1069 NAAGGTV 1075
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
++ R LD E + RY D P + +T+ + ++NDNAP F SA+I
Sbjct: 804 QIYATRALDYETVQRYFFTVQAHDLGSPRRSSPVINVTILVINVNDNAPLFVDAPYSANI 863
Query: 60 LENAEIGS 67
E IG+
Sbjct: 864 SEATSIGT 871
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+L+ A LD E + Y + V D P+ + + + D+NDNAP F
Sbjct: 284 QLRLATALDYETLQMYNFSVRVTDSGTPSRTATGTVLIHVQDVNDNAPRF 333
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
++ LD E + +TL V D A + IT+T+T+++D AP FA+ S SI EN
Sbjct: 3646 SQTLDAETTSTHTLQVAVSDGTVQALQA---ITITVTNVDDEAPVFATASASVSIPENQV 3702
Query: 65 IG 66
G
Sbjct: 3703 AG 3704
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + +T+ V D V+ + +T+TD+ D AP +A+ +AS+LE
Sbjct: 4442 LRTLATLDYEAQSSFTIFVRVSDG---TLSSVAEVRITVTDVADQAPVWAASAYAASVLE 4498
Query: 62 NAEI 65
NA +
Sbjct: 4499 NAPL 4502
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-SVINSASILENAE 64
R +DRE + ++L V D D V+ + L++TDINDN+P F +V +A++ E
Sbjct: 4862 RRVDREDVPLWSLTVRVSD-DAGRSSTVT-VHLSVTDINDNSPLFGQNVYTAANLPERTA 4919
Query: 65 IGS-LSTVNAT---IGVNRCGHTF 84
+G+ ++TV A+ G+N H F
Sbjct: 4920 VGTRVATVQASDRDTGLNAALHYF 4943
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +R TL D L+ LTLTD+NDN P F + + +A IGS
Sbjct: 1657 LDYETFSRKTLTVVATDDGGIPRSAEILVVLTLTDVNDNFPTFTTDNLVVEVAADAAIGS 1716
Query: 68 L 68
+
Sbjct: 1717 I 1717
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A D E YT + D P + +T+TD+NDN P+F + + S+ E
Sbjct: 390 IHAAAAFDYEAQQSYTFGVYAHDLGSPQRTTRVSVAITVTDVNDNTPQFQAPNYAVSVSE 449
Query: 62 ----NAEIGSLSTVNA 73
A I +LS +A
Sbjct: 450 WTASGAAIVNLSATDA 465
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y L P E + +T+ D NDN P S S + E
Sbjct: 5376 LSTTGPLDREAQAAYRLVVVASSIMPPLQEATLDVYVTVLDKNDNHPVLQSTEYSIVLPE 5435
Query: 62 NAEIGSL 68
NA +G+L
Sbjct: 5436 NAAVGTL 5442
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LD E Y + V D P + +++ D NDNAP F + S+L
Sbjct: 696 ELSLAGTLDYELRTSYNITLRVTDTGSPPLYSEVQVLISVLDENDNAPRFGAESYQTSVL 755
Query: 61 ENAEI 65
E+ +
Sbjct: 756 ESVNV 760
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDREK+A Y L A DR P +I++TL DINDNAP+F I E
Sbjct: 722 IRTAESLDREKVASYELRAFAVDRGSPERSVSVVISITLNDINDNAPQFQMSHLDLYIPE 781
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 782 NSPIGS 787
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ GLDRE YTL+ D +P+ + I +T+ DINDN P+F + +
Sbjct: 615 EIFIKEGLDRELTPSYTLSVTATDHGRPSKADTTDIEITVADINDNDPKFLEPKYTGRVD 674
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRG 86
E+A +G+ +S +A G+N R +TF G
Sbjct: 675 EDAFVGTSILKISATDADSGLNGRVRYTFEG 705
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E++ Y LN QD P + + + + D+NDN+P F + + ++L
Sbjct: 303 ELSLRKPLDYERMNSYRLNVRAQDSGSPHRSNSTTVLVRVIDVNDNSPRFYTSLYQEAVL 362
Query: 61 ENAEIG 66
EN +G
Sbjct: 363 ENVAVG 368
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDREK R++ +D+ P + + + + D+NDN P F + S + E
Sbjct: 409 LTTVKELDREKHERFSFRVEARDQGDPVRSANAGVEINIRDVNDNNPIFKPKVYSEIVSE 468
Query: 62 NAEIGS 67
A +GS
Sbjct: 469 EAMLGS 474
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T + LDRE IA + L D P+ + + + + DIND+AP F +
Sbjct: 88 QLTTTQSLDRESIATHHLQIIASDYGHPSQSAYASLIIYVDDINDHAPLFEQKSYQRDVT 147
Query: 61 ENAEIGS-LSTVNAT 74
E++ IGS + TV A+
Sbjct: 148 ESSSIGSTIITVRAS 162
>gi|432891560|ref|XP_004075584.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3188
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDREK A Y+L QD+ +P+ S + + + DINDN+P+F S +A I E
Sbjct: 1749 LSTSRPLDREKTAGYSLTIVAQDQGRPSLSSTSTVKVAVLDINDNSPQFQSNSYTADISE 1808
Query: 62 NAEIGSL 68
IGSL
Sbjct: 1809 GVPIGSL 1815
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE YT+ + +D P + + + + D+NDNAP F + + + E
Sbjct: 1645 ITTTKSLDRESQDCYTVTVYAKDGGLPPNYAKATVKIKVVDVNDNAPIFGRLYYNVEVPE 1704
Query: 62 NAEIGSLSTVNAT 74
N E L T+ AT
Sbjct: 1705 NQEALPLFTLRAT 1717
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + YTL D P + +T+ DINDNAP F I EN + G+
Sbjct: 201 LDREKRSTYTLTLEAFDGGSPIRTDQMTLDITVQDINDNAPVFQQSRYHTIISENLQPGN 260
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 23 QDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS----LSTVNATIGVN 78
QD+ P + + + ++D+NDNAP F +A++ E+ +GS L V+ + +
Sbjct: 2353 QDQGFPPLSSTTTVQIQVSDVNDNAPIFKQSKYTATVSEDGLLGSTVLTLDPVDGDLFRD 2412
Query: 79 RCGHTF 84
CG F
Sbjct: 2413 NCGFDF 2418
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ LD EK ++ D P +++ + L DINDN P F + SI E
Sbjct: 519 ITTSSQLDYEKNPNPSITVVASDGGNPPLSSTAVVNILLQDINDNEPVFERNFYNVSIKE 578
Query: 62 NAEIGS 67
N G+
Sbjct: 579 NTAPGT 584
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPA--WECVSLITLTLTDINDNAPEFASVINSASILE 61
TA LDRE+ A YT D PA + +T+ + D+NDNAP F ++
Sbjct: 1855 TAAPLDRERTASYTFEVCATD-SSPADPRNSTAQVTIYIQDVNDNAPFFI----QDPLIV 1909
Query: 62 NAEIGSLST 70
N + +LST
Sbjct: 1910 NISVSNLST 1918
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L ++ LDRE+ + L +D P L+ + + D+ND P F A I E
Sbjct: 1543 LSISKPLDREEQDVFNLTIVAEDHGIPQHSSSQLLRIHVIDVNDETPLFEEAQYEAQISE 1602
Query: 62 NAEIG-SLSTVNAT 74
N G ++ TV+A+
Sbjct: 1603 NQPAGTTVLTVSAS 1616
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ YTL D + + +T+ + D+NDNAP F + +++E+ GS
Sbjct: 2236 LDYEERTWYTLTVRTSDSTH---QSEANLTVLVDDVNDNAPSFTHDLYQVTVVEHLPAGS 2292
Query: 68 -LSTVNAT 74
+ TV AT
Sbjct: 2293 AIITVTAT 2300
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++RYTL D+ P + + + D NDNAP F+ + SAS+
Sbjct: 2758 EIRSVRPLDREKLSRYTLTIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQIF-SASVP 2816
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IG+N
Sbjct: 2817 ENAPLGFTVTRVTTSDEDIGMN 2838
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F+ + A + E
Sbjct: 187 LVSQGGLDREATPSYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPE 246
Query: 62 NAEIGS 67
+A +G+
Sbjct: 247 DAPVGA 252
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A ++L D P V+ + ++L D+NDN+P F V A I
Sbjct: 674 KLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQYFAHIQ 733
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ ++TV+AT
Sbjct: 734 ENEPAGTYVTTVSAT 748
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LD E I +Y + +D P + + +T+ D+NDNAPEF A I+
Sbjct: 2654 QLSVGQALDFEAIQKYVVWIEARDTGFPPFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIV 2713
Query: 61 ENAEIGSLSTVNA 73
EN L TV A
Sbjct: 2714 ENLSPRKLLTVAA 2726
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QP+ + + + + DINDN P FA + +
Sbjct: 2139 EVRLIGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYRVELE 2198
Query: 61 ENAEIGS-LSTVNATIG 76
EN G+ L V AT G
Sbjct: 2199 ENTLTGTDLIQVLATDG 2215
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE+ +Y L D PA IT+T+ D+NDN P FA + SA++
Sbjct: 2349 ELRLVQSLDRERKEQYVLLITAADSGSPALTGTGTITVTVDDVNDNVPTFAFNMYSATVP 2408
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2409 EDAPTGT 2415
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 7 GLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILENAE 64
GLDRE ++ LN +D+ QP + L+ +T+ DINDN P F+ S+ EN+
Sbjct: 562 GLDRETTSQVVLNISARDQGVQPKFSYAQLV-VTILDINDNKPRFSQPEGYQVSLAENSP 620
Query: 65 IGS----LSTVNATIGVN 78
G+ LS V+ +G N
Sbjct: 621 SGTELLVLSAVDGDLGDN 638
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F + SI+EN
Sbjct: 1409 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIP 1468
Query: 65 IGS 67
+GS
Sbjct: 1469 VGS 1471
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1829 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHIPKFSKPVYSFDIP 1885
Query: 61 ENAEIGSL 68
E+A GSL
Sbjct: 1886 EDATPGSL 1893
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y+L D + +++ + D NDN+P F S +LEN +G
Sbjct: 1307 LDHEATASYSLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSFPKSTLSVDVLENMRVGE 1366
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1367 LVSSVTAT 1374
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L+ DR + + + L D+ND P F + ++ E
Sbjct: 2245 ITVAKPLDREKKPSYMLSVQSSDRGSSPRTDTTTVNIVLKDVNDYVPTFELSPYNVNVPE 2304
Query: 62 NAE 64
N E
Sbjct: 2305 NLE 2307
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ +R L+RE RY + D W + +T+ +TD+NDNAP F
Sbjct: 2860 DITVSRLLNREDTDRYRIRVSAHDS---GWTVSTDVTVFVTDVNDNAPRF 2906
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3502 LDRETLPVYNLSVLAIDSGTPSATGSASLLVTLEDINDNGPTLST--RQGEVMENNRAGT 3559
Query: 68 L 68
L
Sbjct: 3560 L 3560
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA +DRE+ A Y L A +++ +T+ D+NDN+P F + S +++
Sbjct: 881 QITTASIIDREEQAFYQLKVVASGG---AVTGDTIVNITVKDLNDNSPHFIHAVESVNVV 937
Query: 61 ENAEIG 66
EN + G
Sbjct: 938 ENWKAG 943
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE-----FASVINSASILEN 62
LD E +Y+L DR PA + + L D+NDN P F + AS+ EN
Sbjct: 305 LDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRFASVDEN 364
Query: 63 AEIGSL 68
A G++
Sbjct: 365 AAPGTV 370
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++YTL D+ P + + + D NDNAP F+ + SAS+
Sbjct: 2732 EIRSVRPLDREKLSQYTLTIKASDKGTPLQSTTVKVIINILDENDNAPRFSQIF-SASVP 2790
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IGVN
Sbjct: 2791 ENAPLGFTVTRVTTSDEDIGVN 2812
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE Y L V+D+ +P + +T+ DINDN P F+ + A + E+A +G
Sbjct: 165 GLDREATPTYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPIFSQTLYQARVPEDAPVG 224
Query: 67 S 67
+
Sbjct: 225 A 225
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE +Y L D PA I +T+ D+NDN P FA + SA++
Sbjct: 2321 ELRLVQSLDREMKEQYILLITAADSGSPALTGTGTIAVTVDDVNDNVPTFAFNMYSATVP 2380
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2381 EDAPTGT 2387
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A ++L D P ++ + ++L D+NDN+P F V A I
Sbjct: 646 KLSTISQLDREEQAHFSLQVLATDLGSPPLFSITRVNVSLLDVNDNSPVFYPVQYFAHIQ 705
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ ++TV+AT
Sbjct: 706 ENEPAGTYVTTVSAT 720
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QP+ + + + + DINDN P FA + +
Sbjct: 2111 EVRLTGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVG 2170
Query: 61 ENAEIGS-LSTVNATIG 76
EN G+ L V AT G
Sbjct: 2171 ENTLTGTDLIQVFATDG 2187
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LD E I +Y + +D P + + + + D+NDNAPEF A I+
Sbjct: 2628 QLSVGRALDFEAIQKYVVWIEARDTGFPPFSSYKKLEVMVIDVNDNAPEFEQDPFVAEIM 2687
Query: 61 ENAEIGSLSTVNA 73
EN + TV A
Sbjct: 2688 ENLSPRKILTVAA 2700
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1381 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPNFPPGDIFKSIVENVP 1440
Query: 65 IGS 67
+GS
Sbjct: 1441 VGS 1443
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK YTL DR + + + L D+ND P F S ++ E
Sbjct: 2217 ITVAKPLDREKKPSYTLTVQSADRGSSPRTNTTTVNIILKDVNDYVPTFELSPYSVNVPE 2276
Query: 62 NAE 64
N E
Sbjct: 2277 NLE 2279
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1801 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHIPKFSRPVYSFDIP 1857
Query: 61 ENAEIGSL 68
E+A GSL
Sbjct: 1858 EDATPGSL 1865
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 5 ARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILEN 62
+ GLDRE ++ LN +D+ QP + L+ +T+ D+NDN P F+ S+ EN
Sbjct: 532 SSGLDRETASQVVLNISARDQGVQPKFSYAQLV-VTILDVNDNKPRFSQPEGYQVSLAEN 590
Query: 63 AEIGS----LSTVNATIGVN 78
+ G+ LS + +G N
Sbjct: 591 SPSGTELLVLSATDGDLGDN 610
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA +DRE+ A Y L A +++ +T+ D+NDN+P F + S +++
Sbjct: 853 QITTASIIDREEQAFYQLKVVASGG---AITGDAMVNITVKDLNDNSPHFIHAVESVNVV 909
Query: 61 ENAEIG 66
EN + G
Sbjct: 910 ENWKAG 915
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3476 LDRETLPVYNLSVLAIDSGTPSATGSASLLVTLEDINDNGPTLST--RQGEVMENNRAGT 3533
Query: 68 L 68
L
Sbjct: 3534 L 3534
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y L D + ++++ + D NDN+P F +LEN +G
Sbjct: 1279 LDHEATASYLLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKTTLLVDVLENMRVGE 1338
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1339 LVSSVTAT 1346
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D + +++T+T+ D DN P F+ + S + E
Sbjct: 751 ITTKIALDREEKTAYQLQIMATDGGHLHSQNQAIVTITVLDTQDNPPVFSQGMYSFVVFE 810
Query: 62 NAEIG 66
N +G
Sbjct: 811 NVALG 815
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE-----FASVINSASILEN 62
LD E +Y+L DR PA + + L D+NDN P F + AS+ EN
Sbjct: 279 LDYEMRQQYSLTVQAMDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRFASVDEN 338
Query: 63 AEIGSL 68
A G++
Sbjct: 339 AAPGTV 344
>gi|301630557|ref|XP_002944383.1| PREDICTED: protocadherin gamma-C5-like [Xenopus (Silurana)
tropicalis]
Length = 800
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDREK ++YT+ D PA ++I L ++D+NDN P F+ + +A I E
Sbjct: 406 LVTSEHLDREKTSQYTIQVTASDLGSPALSNQTVIVLNVSDVNDNPPAFSQSVYNAHIKE 465
Query: 62 NAEIGS-LSTVNAT 74
N E G+ L TV+AT
Sbjct: 466 NNEPGTLLCTVSAT 479
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++ L+ D + + IT+ + D+NDNAP F S+L
Sbjct: 193 ELVLEKILDREEKGKHELSLTALDGGEQPRSGSTQITIVVLDVNDNAPLFDQSSYKISML 252
Query: 61 ENAEIGS-LSTVNAT 74
EN + + + +NAT
Sbjct: 253 ENLPLKTAIVKLNAT 267
>gi|170584276|ref|XP_001896931.1| Cadherin domain containing protein [Brugia malayi]
gi|158595708|gb|EDP34239.1| Cadherin domain containing protein [Brugia malayi]
Length = 2348
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE IARY L QDR P S++++ + D+ND AP+F S+ I E
Sbjct: 835 LRVVSKLDREMIARYELTVKAQDRGNPPLSSFSIVSIVIIDVNDYAPQFESLRYDLWIAE 894
Query: 62 NAEIGS 67
N+ IG+
Sbjct: 895 NSPIGT 900
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LDRE + R+ L +R PA S + + + D+ DNAP F A I
Sbjct: 212 EIRVGKALDRETLDRHVLKVTAYERLDPAVSASSSVIVEILDVQDNAPIFERNSYYAEIR 271
Query: 61 ENAEIG-SLSTVNA---TIGVN 78
E+A IG +L++V A IG+N
Sbjct: 272 EDAPIGTTLASVFARDLDIGLN 293
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + + + D+ P +L+ + L D+NDNAP F + + +I+E
Sbjct: 318 IQTAHYLDRELMNIIRIYVYATDKGVPPMTSRALLEINLLDVNDNAPVFEQKLCNTTIME 377
Query: 62 NAEIGS 67
N I S
Sbjct: 378 NITIPS 383
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ +Y L +B P LIT+ + DINDNAP F + +I E
Sbjct: 527 ITTINKLDREEKEKYILKVKAEBGGXPPLSDSLLITIIVRDINDNAPYFEPNFYNITIPE 586
Query: 62 NAEIG-SLSTVNA 73
N G SL V A
Sbjct: 587 NEVRGTSLIAVKA 599
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A +DRE+ + Y LN V D + + + L D NDNAPEF S + +I E+
Sbjct: 732 AEEIDREECSSYLLNITVTDHAANPLSASTFLEVILDDANDNAPEFTSENYTVAIAEDTP 791
Query: 65 IG-SLSTVNA 73
G S + V+A
Sbjct: 792 TGTSFTQVSA 801
>gi|301608227|ref|XP_002933692.1| PREDICTED: hypothetical protein LOC100494436, partial [Xenopus
(Silurana) tropicalis]
Length = 4551
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I++YT+ D PA + S+ TL ++DINDNAP F A I E
Sbjct: 2996 LVTDRSLDRETISQYTIQIVAMDLGTPALQTQSIFTLNVSDINDNAPIFLQTHYEALIKE 3055
Query: 62 NAEIGSL 68
N E GSL
Sbjct: 3056 NNEPGSL 3062
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREKI++YT+ D PA + + ITL ++DINDN P F A I EN E GS
Sbjct: 4141 LDREKISKYTIQLTATDLGFPALQTQTTITLHVSDINDNPPVFLQTHYEAFIKENNEPGS 4200
Query: 68 L 68
L
Sbjct: 4201 L 4201
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D +PA IT+ + DINDN P F +L
Sbjct: 2783 ELVLERSLDREEKKEHKLILTALDGGEPAKSGSCQITVIVLDINDNPPVFDKSTYKVKLL 2842
Query: 61 ENAEIGS-LSTVNAT 74
ENA I + L+ +NAT
Sbjct: 2843 ENAIIDTVLTKLNAT 2857
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D +PA IT+ + D NDN P F+ ++L
Sbjct: 3922 ELVLERALDREEKKEHRLILTAVDGGEPARSGSCQITVIVLDFNDNPPVFSQSSYRITLL 3981
Query: 61 ENAEIGS-LSTVNAT 74
EN+++ + L T+NAT
Sbjct: 3982 ENSKLNTLLITLNAT 3996
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+I + L D P + IT+ + D NDN P+F + S+L
Sbjct: 1338 ELVLEHTLDREEIGEHQLILTALDGGNPPRSGTTKITIHVLDNNDNPPKFDQPVYKTSLL 1397
Query: 61 ENAEIGSL 68
EN + +L
Sbjct: 1398 ENIPLDTL 1405
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + Y L D P+ + + + + D+NDN+P F+ I ++
Sbjct: 468 ELVLEKPLDREKQSSYELILTAYDGGNPSKTGTATLRVMIQDVNDNSPAFSQDIYHINLE 527
Query: 61 ENA 63
ENA
Sbjct: 528 ENA 530
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + +Y ++ D P + L ++D+NDN P F+ A I E
Sbjct: 1551 LITNAALDRETMPQYNIHFIASDLGVPPMFTEKTLVLNISDVNDNKPLFSQPFFYAFIHE 1610
Query: 62 NAEIGSL 68
N G+L
Sbjct: 1611 NNLPGTL 1617
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T +DRE A Y + D+ P I L ++D+NDNAP F +
Sbjct: 678 KLITKANMDRETNAEYNITITASDKGLPQLSTNKTIPLIISDVNDNAPVFEKANYIIYVA 737
Query: 61 ENAEIGS 67
EN G+
Sbjct: 738 ENNSPGT 744
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I + L D + IT+ + DINDNAP F +
Sbjct: 2139 ELILEKALDREEIKEHRLILTAYDGGEKPRSGTCHITVIVLDINDNAPVFEKPNYKIHLP 2198
Query: 61 ENAEIG-SLSTVNAT 74
EN G SL +NAT
Sbjct: 2199 ENPPHGKSLILLNAT 2213
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ +D E+ + Y ++ +D+ P E +I + + D NDNAPE S+
Sbjct: 1446 EIHVQGEIDFEESSFYEIHIRARDKGIPVMEGHCVIQVEIEDSNDNAPEIFVTSLENSVP 1505
Query: 61 ENAEIGSL 68
EN G++
Sbjct: 1506 ENTPFGTV 1513
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L DR C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQAVYHLLVRATDRG--GRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADSGLNR 3158
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTAVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ R+T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TD+NDNAP F+ +V++ ++LE
Sbjct: 3293 LDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQ 3352
Query: 63 AEIGSLS 69
+ I L+
Sbjct: 3353 SVITVLA 3359
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P V+ + + +T ++ P+F S S I E
Sbjct: 1619 IKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + ILE
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILE 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L DR C + I LTL D+NDNAPEF++ + ++
Sbjct: 3081 ELKTSAPLDREEQAVYHLLVRATDRG--GRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3138
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3139 ENTEPGTLLTRVQATDADSGLNR 3161
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3394 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3453
Query: 61 ENAEIG 66
EN +G
Sbjct: 3454 ENKPVG 3459
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ R+T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2349 RTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2408
Query: 66 GSLST 70
G T
Sbjct: 2409 GHFVT 2413
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TD+NDNAP F+ +V++ ++LE
Sbjct: 3296 LDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQ 3355
Query: 63 AEIGSLS 69
+ I L+
Sbjct: 3356 SVITVLA 3362
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P V+ + + +T ++ P+F S S I E
Sbjct: 1622 IKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISE 1681
Query: 62 NAEIGSL 68
IGS
Sbjct: 1682 TVSIGSF 1688
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + ILE
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILE 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T R LDREK+A Y+L DR P + + + D+NDNAP F+ + SA++
Sbjct: 2701 EIRTNRPLDREKVALYSLKVKATDRGSPPKSTSVKVLVRVLDVNDNAPRFSKIF-SATVA 2759
Query: 61 ENAEIG 66
ENA +G
Sbjct: 2760 ENAPVG 2765
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 34/69 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE A Y L+ D P V + +TL DINDN P F V AS+ E
Sbjct: 618 LSTAVELDREDQASYLLHIRAADAGSPPLHSVGRVNITLWDINDNRPVFYPVQYFASVKE 677
Query: 62 NAEIGSLST 70
N GS T
Sbjct: 678 NEPPGSYVT 686
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A YTL D PA +T+ + D+NDN P F+S +I
Sbjct: 2294 QLSVTKTLDREFGAEYTLLITATDSGSPALSGTGTVTVLVDDVNDNVPVFSSSTFHTTIA 2353
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ +++ +A +G+N
Sbjct: 2354 EDAPTGTDVLLVNSSDADVGIN 2375
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ P + +T+ DINDN P F +S+ E
Sbjct: 187 LVSTGGLDRELTPFYQLLIEVEDKGVPKKFGYLQVNVTIQDINDNPPVFEQDQYHSSVFE 246
Query: 62 NAEIGS 67
+A +GS
Sbjct: 247 DAAVGS 252
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ YT+ D+ P +T+ + D+NDN P F+ I + EN G+
Sbjct: 2091 LDREELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILTGT 2150
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E Y+L H D+ P+ + T+ L D+NDN P F + AS+ EN
Sbjct: 295 LDFESKKEYSLTIHAADKGVPSLSGRTETTIKLLDVNDNDPVVKFRYFPTTSKFASVDEN 354
Query: 63 AEIGSL 68
A+IG++
Sbjct: 355 AQIGTV 360
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LD E I +Y L +D+ P + + +T+ D+NDN P F +A IL
Sbjct: 2597 ELSIRHPLDYECIQKYVLWIEARDQGFPPYSSYEKVEITVLDVNDNLPVFDKDPFNAEIL 2656
Query: 61 EN 62
EN
Sbjct: 2657 EN 2658
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K A LDRE+I+ Y L V D +P A + + + + DIND+ P F + I
Sbjct: 404 IKVASLLDRERISSYNLTVSVSDNGRPMARSSFASLVIFVNDINDHPPIFQEELYRVDIS 463
Query: 61 ENAEIGS-LSTVNATIG 76
E+ GS + V+AT G
Sbjct: 464 EDIPKGSYIKGVSATDG 480
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ +A LDRE + LN +D+ QP LI +++TD+ND P F S+L
Sbjct: 510 VTSAALLDREVASEIVLNISAKDQGLQPKISYTKLI-VSITDVNDQVPTFTQSTYHVSLL 568
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ LS ++ +G N
Sbjct: 569 EHAPAGTELLVLSASDSDLGPN 590
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R L+RE+ Y + D W + +T+ +TD+NDN P F E EI
Sbjct: 2808 RPLNREETDHYIVKVSAHDS---GWTVSTDVTIFITDVNDNVPRFTRPSYYLEYPELTEI 2864
Query: 66 GSLST 70
GSL T
Sbjct: 2865 GSLVT 2869
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ Y L D + + +T+T+TD DN P F+ S +
Sbjct: 721 KITTLVALDREEKTAYQLQVRATDGGGLSSHTHAFVTVTVTDTQDNPPVFSQENYSFVMF 780
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ + TV+AT
Sbjct: 781 ENVSPGTVIGTVSAT 795
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE Y L D P ++ + + L DINDN P + A ++
Sbjct: 3438 QVSVAAELDRETTPVYNLTVLAVDTGTPPATGIATVIVNLEDINDNGPTLTTTY--AEVM 3495
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3496 ENQRAGT 3502
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 2 LKTARGLDREKIAR-YTLNAHV--QDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
++TA LDRE+ + Y L+ + D +QP + + +TL DINDN P FA+ + +
Sbjct: 1669 IQTAAELDREQGSDLYVLDVYAIETDANQPRTQRTE-VEITLQDINDNPPVFANDVLDVT 1727
Query: 59 ILEN 62
I EN
Sbjct: 1728 IEEN 1731
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y L D ++++++ D NDN+P F S +LEN IG
Sbjct: 1249 LDYESSSSYLLKIIADDAGDVPLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGD 1308
Query: 68 L 68
L
Sbjct: 1309 L 1309
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q + +T+ D+ND+ P+F+ S I
Sbjct: 1774 DLIATKKLDRERRSKYSLLVRADDGKQ---SSDMRLNITVKDVNDHTPKFSRPTYSFDIP 1830
Query: 61 ENAEIGSLSTV 71
E+ GS+ V
Sbjct: 1831 EDVTPGSIVEV 1841
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y N V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQATY--NLLVKATDGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LDRE ++ YTL D P + + + ++DINDNAP F+ +S I
Sbjct: 3391 EVKVTRLLDREAVSGYTLTVQASDNGSPPRVNTTTVNIDVSDINDNAPVFSKGNHSVIIQ 3450
Query: 61 ENAEIGS 67
EN +GS
Sbjct: 3451 ENKPVGS 3457
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A IGS+
Sbjct: 1574 SAAIGSV 1580
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE RY+LN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDRYSLNITVSDLGLPQKAAWRLLEIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A I E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDA 3348
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR K Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTAKELDRSKQVEYDLMVKATDKGNPPMSEMTSVRIFVTIADNASPKFTSKEYSFEISE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TISIGSF 1685
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTIYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+ND++P F + A I E+A
Sbjct: 2346 RTLDYEQFQQHKIFVRAVDGGMPPLSSEVIVTVDVTDLNDHSPLFDQPVYEAKISEHAAH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK RY + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLKELDHEKRDRYQIKVVASDLGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2929 EDDPPGGVIAILSTTDA 2945
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE+ Y+L AHV+D + W+C S I + L+D+NDN P F ++ E
Sbjct: 2970 LHTSRPLDREQRPHYSLVAHVRDVARWEWQCNSSIEVLLSDVNDNPPVFGQKAYELALPE 3029
Query: 62 NAEIGSL----STVNATIGVNR 79
+ G L ++ +GVNR
Sbjct: 3030 DTPAGRLVAHVHALDRDLGVNR 3051
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ AR+ L QD QP + + +T+ DIND+ PEF + +A++ E A +GS
Sbjct: 3079 LDREQCARFNLTVQAQDHGQPPLASRTHLAVTVQDINDSPPEFTQQMYAAAVSEVAPVGS 3138
Query: 68 -----LSTVNATIGVN 78
+ + +GVN
Sbjct: 3139 PISAAIKATSRDVGVN 3154
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ AR LD E+ Y L +D +P + + +++ D NDNAP F SA++ E
Sbjct: 3179 LRVARPLDYEETPSYQLAVEARDGGEPPLSARAWLNVSVLDANDNAPVFGGPY-SATVTE 3237
Query: 62 NAEIGSL 68
+A G L
Sbjct: 3238 DASPGQL 3244
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE ++RY L D P +L+ + + D+ND+ P F +A +
Sbjct: 3277 QLSVAGPLDRETVSRYVLEVECWDGGTPPLSAQALVHVEVLDVNDHPPRFDQSNYTAVVH 3336
Query: 61 ENAEIG 66
E + G
Sbjct: 3337 EGRQAG 3342
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 2 LKTARG-LDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASI 59
L T +G LDRE R+ L V D + + +++ + D+NDNAP FA I
Sbjct: 855 LLTVKGPLDREHHDRHLLTVTVADGALEDPLSSTATVSIVVRDVNDNAPHFARAPYVVRI 914
Query: 60 LENAEIGSLST 70
E+ IG+L T
Sbjct: 915 REDLPIGALVT 925
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K AR LDRE A Y L V D A +++ + + D NDN P F+ + + E
Sbjct: 1357 IKLARPLDREICASYNLTVQVTDGSAKA---SAMVHVEVLDANDNWPVFSESLYQVEVSE 1413
Query: 62 NAEIGS 67
++ G+
Sbjct: 1414 SSSPGT 1419
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ T LDRE R+ L + D+ +P + + +TL DIND+ P F
Sbjct: 1156 VTTVCSLDREAEERHVLEVVLTDQGEPPLSSTTQVLVTLADINDHKPVF 1204
>gi|47227548|emb|CAG04696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2289
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T R LDREK+A+Y+L D P + + + D+NDNAP F+ + SA++
Sbjct: 397 EIRTTRPLDREKVAQYSLKVKATDWGLPQKNMAVKVLINILDVNDNAPRFSKIF-SATVA 455
Query: 61 ENAEIG----SLSTVNATIG--VNRCGH 82
ENA +G ++T + G N C H
Sbjct: 456 ENAPVGYTVTRVTTTDEDAGSNANECQH 483
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LD E I +Y L +D+ P + + +T+ D+NDN P F A IL
Sbjct: 293 ELSIRHPLDYEHIQKYVLWIEARDQGFPPYSSYEKVEITIQDVNDNYPVFEKDPFQADIL 352
Query: 61 EN 62
EN
Sbjct: 353 EN 354
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE+ Y L D P + + + L DINDN P + + A ++
Sbjct: 1019 QVSVAAPLDRERTPVYNLTVLAVDTGTPPATGSATVIVNLEDINDNGPTLTT--SYAEVM 1076
Query: 61 ENAEIG----SLSTVNATIGVNR 79
EN G +L+ +A + NR
Sbjct: 1077 ENQRAGTAVTTLTASDADLPPNR 1099
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEF 50
++ T+ LDRE+ A Y L D QP + +++T+ DINDN P F
Sbjct: 89 QIITSSVLDREERANYQLLVVATDGGQPQGLSSSATVSVTVADINDNPPRF 139
>gi|308500712|ref|XP_003112541.1| CRE-FMI-1 protein [Caenorhabditis remanei]
gi|308267109|gb|EFP11062.1| CRE-FMI-1 protein [Caenorhabditis remanei]
Length = 2600
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ A L + +DR P+ S ITLTL+D+NDNAP F + I E
Sbjct: 847 LRVSSKLDREQFAVIVLPIYARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSYDLYIAE 906
Query: 62 NAEIGS 67
NA +GS
Sbjct: 907 NAPVGS 912
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P + +L+ +T+ D+NDNAP FAS + +I+E
Sbjct: 330 IQTAAPLDRESLSLIRLDVIASDKGTPKRDSKALVEITVVDVNDNAPVFASDSYNVTIME 389
Query: 62 NAEIGS-LSTVNAT 74
N + + ++TV AT
Sbjct: 390 NITLPAVIATVKAT 403
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE A +++ D P + I + L DINDNAP+F S +A+I
Sbjct: 738 DISVASDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATIS 797
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+ +G+ +S ++A IG N
Sbjct: 798 EDIPVGTSFLQVSAIDADIGPN 819
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LDRE +RY+L +D P + +T+ L DINDNAP F + +I E
Sbjct: 536 IKTTKLLDRETTSRYSLKVTARDMGTPPLNTTTTMTVVLKDINDNAPIFDKKEYNVTISE 595
Query: 62 NAEIGS 67
GS
Sbjct: 596 EMPRGS 601
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ +DRE + ++ L +R P + + + + D+ DN+P F I
Sbjct: 224 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIR 283
Query: 61 ENAEIGS 67
E+A IG+
Sbjct: 284 EDAPIGT 290
>gi|341899515|gb|EGT55450.1| hypothetical protein CAEBREN_29330 [Caenorhabditis brenneri]
Length = 2586
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ A L +DR P+ S ITLTL+D+NDNAP F + I E
Sbjct: 834 LRVSSKLDREQFAVIVLPIFARDRGNPSLSAASEITLTLSDVNDNAPAFEQLSYDLYIAE 893
Query: 62 NAEIGS 67
NA IGS
Sbjct: 894 NAPIGS 899
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P E +L+ +T+ D+NDNAP FAS + +ILE
Sbjct: 317 IQTAAPLDRETLSLIRLDVIASDKGVPKRESSALVEITVLDVNDNAPVFASDSYNVTILE 376
Query: 62 NAEIGS-LSTVNAT 74
N + + ++TV AT
Sbjct: 377 NITLPAVIATVKAT 390
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT + LDRE +ARY+L +D P + IT+ L DINDNAP F + +I E
Sbjct: 523 LKTTKLLDRETVARYSLKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEYNVTISE 582
Query: 62 NAEIGS 67
GS
Sbjct: 583 EMPRGS 588
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE A +++ D P + I + L DINDNAP+F S +A+I
Sbjct: 725 DISVAADLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNAPQFTSSSYAATIS 784
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+ +G+ +S ++A IG N
Sbjct: 785 EDIPVGTSFLQVSAIDADIGPN 806
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ +DRE + ++ L +R P + + + + D+ DN+P F I
Sbjct: 211 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIR 270
Query: 61 ENAEIGS 67
E+A IG+
Sbjct: 271 EDAPIGT 277
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ GLDREK +YTL DR PA + + + + D+NDN+P F+ + +LE
Sbjct: 1806 LSTSHGLDREKKPKYTLEVVAVDRGSPALSATATVEVKVLDVNDNSPVFSKNSYTVEVLE 1865
Query: 62 NAEIG 66
NAE G
Sbjct: 1866 NAEEG 1870
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LD E Y L + +D P +++ + + D+NDNAP FA + + E
Sbjct: 1702 ITTTKELDAELQNHYVLTVYARDGGLPPNFAKAVVRVEVQDVNDNAPVFAKMWYGLEVPE 1761
Query: 62 NAEIGSLSTVNAT 74
N L V AT
Sbjct: 1762 NQPAVELCFVKAT 1774
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD E ++ D +P + + + + D+NDNAP F+S + S+ E
Sbjct: 525 ITTATALDFESEPAPSVTVIATDGGRPPLSSTAKVDIVVQDVNDNAPVFSSNFYNVSVKE 584
Query: 62 NAEIGS 67
N G+
Sbjct: 585 NTPAGT 590
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A GLD E + Y L V DR P +T+ D+NDN P F+ + ++ E
Sbjct: 2543 LLLAEGLDFETKSLYNLTVVVSDRGVPQRSSSVAALITIGDVNDNPPVFSRPEYTVALSE 2602
Query: 62 NAEIGS 67
A G+
Sbjct: 2603 GAVSGT 2608
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
E+ T LDRE+ + Y L VQD P +++ D ND+AP F V
Sbjct: 1167 EISTRLALDREQQSSYQLFVVVQDGGTPPRSATGTAHISVLDENDHAPTFTHV 1219
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + Y+L D P + +T+TDIND+AP F A I E+ GS
Sbjct: 211 LDREKRSSYSLVIEAFDGGSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGS 270
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 26/61 (42%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ Y L D P S T+ +TD+NDN P F +I E GS
Sbjct: 428 LDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGS 487
Query: 68 L 68
Sbjct: 488 F 488
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I LTL D+NDNAPEF++ ++ ++
Sbjct: 3076 ELKTLAPLDREEQAVY--NLLVKATDGGGRFCQASIVLTLEDVNDNAPEFSADPHAITVF 3133
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3134 ENTEPGTLLTRVQATDADAGLNR 3156
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3389 EVKVTRLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQ 3448
Query: 61 ENAEIG 66
EN +G
Sbjct: 3449 ENKPVG 3454
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1512 LYTSETLDHEAIHQHVLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1571
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1572 SAAVGSV 1578
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ GLDRE + Y L + DR I + + D+NDNAP+ + + I+E
Sbjct: 1089 IETSDGLDRESTSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIIE 1148
Query: 62 NA 63
N+
Sbjct: 1149 NS 1150
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN D P L+ + + D NDN PEF + E
Sbjct: 772 LKILSPLDRETTDKYTLNITASDLGIPQKAAWRLVDIRVLDANDNPPEFLQESYFVEVSE 831
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 832 DKEVDS 837
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TD+NDN+P F+ +A I E+A
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDVNDNSPVFSQDTYTAVISEDA 3346
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1197 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1243
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1617 IKTAKELDRNSQVEYDLMVKATDKGNPPMSEITSVHVFVTIADNASPKFTSKEYSVEISE 1676
Query: 62 NAEIGSL 68
IGS
Sbjct: 1677 TVGIGSF 1683
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus floridanus]
Length = 3165
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +ARYTL A DR PA V + + + DIND+ P F S I E
Sbjct: 968 VRTAKPLDRESVARYTLKAAAIDRGSPALSSVVPVIVKIEDINDSPPAFESDKIILYIAE 1027
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1028 NSPIGS 1033
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE I Y L +D P + + +++TD+NDNAP F + SI E
Sbjct: 864 ITTTKALDRELIPSYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYLGSIPE 923
Query: 62 NAEIGS 67
+ +G+
Sbjct: 924 DVLVGT 929
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY D + + + LT+TD+NDN P F A I E
Sbjct: 653 IYTTKQLDREQCSRYQFIVIAMDSGEEPKSASATVILTVTDVNDNDPYFEPKNYEAVISE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVASVTAT 726
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E I Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESIRNYKIVIRAQDGGSPARSNTTQLLVMVKDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN +G
Sbjct: 601 ENVPLG 606
>gi|348536026|ref|XP_003455498.1| PREDICTED: protocadherin-8-like [Oreochromis niloticus]
Length = 902
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +D P ++ T+ LTD NDNAP FA + S++EN
Sbjct: 421 TAAALDRERISEYNLTVMAEDFGSPPLRKITQYTIRLTDENDNAPHFAKAVYEVSVVENN 480
Query: 64 EIGS-LSTVNAT 74
G+ ++TV AT
Sbjct: 481 APGAYITTVEAT 492
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + YT+ D P S IT+ +TD NDN+P F S S+
Sbjct: 199 ELVLMKELDRETQSSYTVELVATDGGNPYRSGSSKITIKVTDFNDNSPVFDQNSFSVSLP 258
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A +G+ L+ V+A G+N
Sbjct: 259 EDAPVGTVILDLNAVDADEGLN 280
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 1 ELKTARGLDREKIARYTLNA----HVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
EL +DRE+I R++L V + + ++ + + + + DINDN+PEF + +
Sbjct: 87 ELTVGERVDRERICRHSLQCLITFDVVNFSKDRYKLIH-VEVEIKDINDNSPEFPNKESI 145
Query: 57 ASILENAEIGSL----STVNATIGVN 78
I ENA +GS V+A +G N
Sbjct: 146 VEISENAAVGSRIPLDPAVDADVGSN 171
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQATYHL--LVKAADGGGRFCQASIVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVATTTVNIDVSDVNDNAPVFSRGNYSLIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEATHQHILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RYTLN V D P L+ + + D NDN PEF + E+ EI S
Sbjct: 780 LDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSEDKEINS 839
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDN P F+ +A + E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVVSEDA 3348
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TAR LDRE+ + L V D P V+ + + + D NDN P+F
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTVTRVIVKILDENDNKPQF 1245
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTARELDRSNQVAYDLMVKATDKGDPPMSEITSVRVFVTIADNASPKFTSREYSVEISE 1678
Query: 62 NAEIGSL 68
+GS
Sbjct: 1679 TVGVGSF 1685
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSLI-TLTLTDINDNAPEFASVINSASI 59
+ T+ LD E + R YTL D P V ++ TLTL ++NDN P F + +I
Sbjct: 519 VSTSENLDYELMPRVYTLRIRASDWGSPYRREVEILATLTLNNLNDNTPLFEKIHCEGTI 578
Query: 60 LENAEIG-SLSTVNA 73
+ +G ++TV+A
Sbjct: 579 PRDLGVGEQITTVSA 593
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D P S I +++ DINDN P F A++
Sbjct: 3181 IQLEKPLDRELQAVYTLTLKAVDHGLPRRLTATSTIVISVLDINDNPPVFEYREYGATVS 3240
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3241 EDILIGT 3247
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
++ + LD EK Y L +D+ +P + + + + D+N+N P F S + +
Sbjct: 983 VRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFPSFVEKGA 1042
Query: 59 ILENAEIGS 67
+ ENA +GS
Sbjct: 1043 VKENAPVGS 1051
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLRELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2929 EDDPPGGVIAIVST 2942
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++YTL D+ P + + + D NDNAP F+ + SAS+
Sbjct: 2772 EIRSIRPLDREKLSQYTLTIKASDKGIPLQSTTVKVIINVLDENDNAPRFSQIF-SASVP 2830
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IGVN
Sbjct: 2831 ENAPLGFTVARVTTSDEDIGVN 2852
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE Y L V+D+ +P + +T+ DINDN P F+ + A + E+A +G
Sbjct: 203 GLDREATPTYQLLVQVEDKGEPRRRGYLQVNVTIQDINDNPPIFSQTLYQARVPEDAPVG 262
Query: 67 S 67
+
Sbjct: 263 A 263
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE +A YTL D+ QP+ + + + + DINDN P FA + +
Sbjct: 2151 EVRLTGELDREAVANYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVA 2210
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2211 ENTLTGT 2217
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ + ++L D P V+ + +T+ D+NDN+P F V A I
Sbjct: 686 KLSTISQLDREEQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNSPVFYPVQYFAHIQ 745
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ ++T++AT
Sbjct: 746 ENEPAGTYVTTLSAT 760
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE +Y L D PA I +T+ D+NDN P FA + A++
Sbjct: 2361 ELRLVQSLDREAKEQYLLLVTAADTGSPALTGTGTIAVTVDDVNDNVPTFAFNMYFATVP 2420
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2421 EDAPTGT 2427
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LD E + +Y + +D P + + +++ D+NDN PEF A I
Sbjct: 2668 QLSVGRALDFESVQKYVVWIEARDMGFPPFSSYKKLEISVIDVNDNVPEFERDPFIAEIA 2727
Query: 61 ENAEIGSLSTVNA 73
EN + TV A
Sbjct: 2728 ENLSPRKILTVAA 2740
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1841 ELIATKRLDRERRSKYSLLVRADDGLQ---SSDVRINITVSDVNDHIPKFSKPVYSFDIP 1897
Query: 61 ENAEIGSL 68
E+A GSL
Sbjct: 1898 EDATPGSL 1905
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK YTL DR + +++ L D+ND P F S ++ E
Sbjct: 2257 ITVAKPLDREKKPSYTLTVQSSDRGSSPRTDTTTVSIVLKDVNDFIPTFELSPYSVNVPE 2316
Query: 62 NAE 64
N E
Sbjct: 2317 NLE 2319
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1421 AKKLDFETQYLYKLNITAKDQGRPLQSSTMSVVIHVRDFNDNPPHFPPGDIFKSIVENVP 1480
Query: 65 IGS 67
+GS
Sbjct: 1481 VGS 1483
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ + +LEN G+
Sbjct: 3516 LDRETLPVYNLSVLAIDSGTPSATGSASLVVTLEDINDNGPTLST--SQGEVLENNRAGT 3573
Query: 68 L 68
L
Sbjct: 3574 L 3574
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y+L D + ++++ + D NDN+P F +LEN +G
Sbjct: 1319 LDYEATASYSLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENMRVGE 1378
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1379 LVSSVTAT 1386
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ +R L+RE RY + D W + +T+ ++D+NDNAP F
Sbjct: 2874 DITISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVSDVNDNAPRF 2920
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 8 LDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILENAEI 65
LDRE ++ LN +D+ QP + L+ +T+ D+NDN P F S+ EN+
Sbjct: 575 LDRETASQVVLNVSARDQGVQPKFSYAQLV-VTILDVNDNKPRFGQPEGYQVSLAENSPS 633
Query: 66 GS----LSTVNATIGVN 78
G+ LS + +G N
Sbjct: 634 GTELLVLSATDGDLGDN 650
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 2 LKTARGLDREKIARYTLN------AHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
+ T LDRE+ Y L H+Q ++Q +++T+T+ D DN P F+
Sbjct: 791 ITTKIALDREEKTAYQLQIVATDGGHLQSQNQ------AIVTITVLDTQDNPPVFSQGTY 844
Query: 56 SASILENAEIG 66
S + EN +G
Sbjct: 845 SFVVFENVALG 855
>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3253
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE YTL QD+ PA ++ + +T+ DIND++P+F S +A I E
Sbjct: 1796 LSTSRPLDREMRTGYTLTITAQDQGHPALSSIATVEVTILDINDHSPQFESSAYTADIPE 1855
Query: 62 NAEIGS 67
+ IGS
Sbjct: 1856 DIPIGS 1861
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + YTL+ D P + +T+ DINDNAP F A I EN + GS
Sbjct: 210 LDREKRSTYTLSLEAFDGGSPKRTDEMTLDVTVQDINDNAPVFNQSRYHAIISENLQPGS 269
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA----SVINSASILENA 63
LD E +A Y L V DR P LI +++ D NDN P F+ SV+ S +
Sbjct: 2520 LDYEAVASYNLTVVVSDRGIPQRSSSVLILISVLDTNDNPPAFSRAEYSVVLSEGVAAGT 2579
Query: 64 EIGSLSTVN 72
EI LS +
Sbjct: 2580 EILHLSATD 2588
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 23 QDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS----LSTVNATIGVN 78
QD+ P+ ++ + + +TD+NDNAP F + AS+ E+ GS L V+ +
Sbjct: 2418 QDQGTPSLSSIATVHVHVTDVNDNAPIFHQLEYRASLSEDDVPGSAILTLEAVDGDVNRE 2477
Query: 79 RCGHTF 84
CG F
Sbjct: 2478 NCGFDF 2483
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE YT+ + +D P + + + + D NDNAP F + + + E
Sbjct: 1692 ITTTKSLDRELQEYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNAPVFGRLYYNIEVPE 1751
Query: 62 NAEIGSLSTVNA 73
N + L T+ A
Sbjct: 1752 NLDAMPLFTLRA 1763
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD EK ++ D +P +++ + L DINDN P F + + SI E
Sbjct: 528 ITTHSQLDYEKNPNPSITVVATDGGKPPLSSTAVVNIVLQDINDNEPVFERNVYNVSIKE 587
Query: 62 NAEIGS 67
N G+
Sbjct: 588 NTAPGT 593
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ R L RE + + L VQ D ++ +++ + DINDN P F + +ASI E
Sbjct: 2619 LRLQRALGRESQSTHVLI--VQATDGQGQYALAPVSIEVKDINDNRPFFPLKLLTASIRE 2676
Query: 62 NAEIGSLSTV 71
N +L TV
Sbjct: 2677 NKPQNALVTV 2686
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
E+ T LDRE+ + Y L VQD P +T+ D NDN P F
Sbjct: 1161 EINTKTVLDREQQSSYQLIVLVQDGGSPPRSATGTAFITVLDDNDNDPAF 1210
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEF 50
T LDREKIA YT D + +T+ + D+NDNAP F
Sbjct: 1902 TTAPLDREKIASYTFKVCATDSSPLNPLNSTTEVTIAVQDVNDNAPFF 1949
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T R LDREK+A+Y L DR P + + + D+NDNAP F+ + SA++
Sbjct: 3192 EIRTTRPLDREKVAQYGLKVKATDRGLPQKNMAVRVLINVLDVNDNAPRFSKIF-SATVA 3250
Query: 61 ENAEIG 66
ENA G
Sbjct: 3251 ENAPAG 3256
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ D P + +TL D+NDN P F V A++ E
Sbjct: 1110 LSTAAELDREERASYLLHVQAADGGSPPLRSAGRVNVTLRDVNDNRPVFYPVQYFANVKE 1169
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 1170 NEPSGSYVTTVSAT 1183
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F S+ E
Sbjct: 679 LVSTGGLDREVTPFYQLLIEVEDKGEPKKFGYLQVNVTIQDINDNPPSFEQDQYQTSVFE 738
Query: 62 NAEIGS 67
+A +GS
Sbjct: 739 DAAVGS 744
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ YTL D+ +P +T+ + D+NDN P F+ I I EN G+
Sbjct: 2580 LDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGT 2639
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LD E I +Y L +D+ P + + +T+ D+NDN P F A IL
Sbjct: 3088 ELSIRHPLDYEHIQKYVLWIEARDQGFPPYSSYGKVEITIQDVNDNHPVFDKDPFQADIL 3147
Query: 61 EN 62
EN
Sbjct: 3148 EN 3149
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE Y + D W + +T+ +TDINDNAP F+
Sbjct: 3294 DITVSRPLNREDTDHYIVKVSAHDS---GWTVSTDVTIFITDINDNAPRFSRPSYYLDYP 3350
Query: 61 ENAEIGSLST-VNAT 74
E E+GSL T V AT
Sbjct: 3351 ELTEVGSLVTQVTAT 3365
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASIL 60
GLD E Y+L H D P+ + T+ L D+NDN P F + AS+
Sbjct: 785 EGLDYESKREYSLTIHAVDNGVPSLSGRAEATIKLLDVNDNDPVVKFRYFPTTSKFASVD 844
Query: 61 ENAEIGSL 68
ENA+IG++
Sbjct: 845 ENAQIGTV 852
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE +RY L D P +T++++D+NDNAP F + +I E+A G+
Sbjct: 2790 VDREARSRYVLLITATDSGVPPLSGTCTVTVSVSDVNDNAPVFTASSFHTTITEDAPTGT 2849
Query: 68 ----LSTVNATIGVN 78
+++ +A +G N
Sbjct: 2850 DVLLVNSSDADVGNN 2864
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K A LDRE+I+ Y L V D +P A + + + + DIND+ P F +
Sbjct: 896 IKVASVLDRERISSYNLTVSVSDNGRPVARSSFASLVIFVNDINDHPPIFQETEYRVDVS 955
Query: 61 ENAEIGS-LSTVNATIG 76
E+ GS + V+AT G
Sbjct: 956 EDIPKGSYIKGVSATDG 972
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ Y L D +++T+T+ D DN P F+ + S +
Sbjct: 1213 KIGTLVPLDREEKTTYQLQVAAADGGGLRSHTQAIVTVTVIDTQDNPPVFSQKVYSFVMF 1272
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TV+AT
Sbjct: 1273 ENVGVGTVIGTVSAT 1287
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D ++++++ D NDNAP F S +LEN IG
Sbjct: 1741 LDYETTSSYSLKIIAVDAGAEPLSSSCMLSISILDENDNAPSFPKPSVSVDVLENMRIGE 1800
Query: 68 L-STVNAT 74
L ++V AT
Sbjct: 1801 LVASVTAT 1808
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 2 LKTARGL-DREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASI 59
L T+ GL DRE + LN +D+ QP L+ + +TD+ND P F S+
Sbjct: 1001 LVTSAGLLDRETTSEIVLNISAKDQGLQPRVSYTKLV-INITDVNDQVPTFTQSTFHVSL 1059
Query: 60 LENAEIGS----LSTVNATIGVNRCGH 82
+E+A G+ LS + +G N H
Sbjct: 1060 VEHAPAGTELLVLSATDDDLGSNGTVH 1086
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q + +T+ D+ND++P+F+ S I
Sbjct: 2263 DLIATKKLDRERRSKYSLLVRADDGKQ---SSDMRLNITVKDVNDHSPKFSRATYSFDIP 2319
Query: 61 ENAEIGSL 68
E+ GS+
Sbjct: 2320 EDMAAGSI 2327
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE Y L D P + + + L DINDN P + + A ++
Sbjct: 3929 QVSVAAPLDRETTPVYNLTVLAVDTGTPPATGSTTVIVNLEDINDNGPTLTT--SYAEVM 3986
Query: 61 ENAEIGSLST 70
EN G+ T
Sbjct: 3987 ENQRAGTAVT 3996
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T+R +DRE+I+ + L+ ++D P I + + D NDN E SV
Sbjct: 4034 LTTSREIDREQISDFYLSVVIKDAGVPQMSSTGTIHVKINDQNDNPSEPRSV 4085
>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3282
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDREK Y+L QD+ P + + + + DIND++P+F S +A ILE
Sbjct: 1801 LSTSRPLDREKRPGYSLTVIAQDQGHPPLSSTATVEVIVLDINDHSPQFQSSSYTAEILE 1860
Query: 62 NAEIGSL 68
+ IGSL
Sbjct: 1861 DVPIGSL 1867
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE YT+ +D P + + + +TD+NDN P F + S + EN E
Sbjct: 1701 KSLDRELQEYYTVTVSAKDGGLPPNYAKATVRIKVTDVNDNPPVFGRLYYSIEVPENLEA 1760
Query: 66 GSLSTVNAT 74
L T+ AT
Sbjct: 1761 LPLFTLRAT 1769
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + YTL+ D P + +T+ DINDNAP F A I EN + GS
Sbjct: 213 LDREKRSTYTLSLEAFDGGSPKRTDQMTLDITVQDINDNAPVFNQSRYHAIISENLQPGS 272
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA----SVINSASILENA 63
LD E + Y L V DR P I +++TD NDN P F+ SVI S
Sbjct: 2546 LDFEAVPSYNLTVVVSDRGIPQRSSSVPIIISVTDANDNPPVFSRTEYSVILSEGTAAGT 2605
Query: 64 EIGSLSTVN 72
EI LS +
Sbjct: 2606 EILHLSATD 2614
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPA--WECVSLITLTLTDINDNAPEFAS---VIN-SA 57
TA LDRE+ A YT D PA + +T+ + D+NDNAP F ++N SA
Sbjct: 1907 TASPLDRERTASYTFEVCATD-SSPANPRNSTAQVTIYIQDVNDNAPFFIQDPLIVNVSA 1965
Query: 58 SILENAEIGSLSTVNA 73
S + N + L+T+ A
Sbjct: 1966 SSVSNRRV--LATMRA 1979
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD EK ++ D +P+ +++ + L DINDN P F + SI E
Sbjct: 531 ITTLSQLDYEKNPSPSITVVATDGGKPSLSSTAVVNIFLQDINDNEPVFERNFYNVSIEE 590
Query: 62 NAEIGS 67
N G+
Sbjct: 591 NTGPGT 596
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y N V+ D C + I LTL D+NDNAPEF + + ++
Sbjct: 3079 ELRTLAPLDREEQAVY--NLLVKATDGGGRSCQATIVLTLEDVNDNAPEFTADPYTITVF 3136
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3137 ENTEPGTLLTRVQATDADAGLNR 3159
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D+ND+AP F S + E
Sbjct: 1515 LYTSEKLDHEAIHQHMLTVMVRDQDVPVKRNFARIIVNVSDMNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1575 SAAVGSV 1581
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ +T+ D NDN PEF + E
Sbjct: 775 LKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNPPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 835 DKEVNS 840
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2347 RALDYEQFQQHKVFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEAKISEHAAH 2406
Query: 66 G 66
G
Sbjct: 2407 G 2407
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE+ A YTL D+ P S + +++ DINDN P F A++
Sbjct: 3182 IQLEKHLDREQQAVYTLTLKAVDQGVPRKLTATSTVVVSVLDINDNPPVFEYREYGATVS 3241
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3242 EDILIGT 3248
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
+ T LD E+ + V D P EC + +T+ + DIND P F+ + AS+
Sbjct: 1830 IHTVLSLDYEETRVFHFTVQVHDMGTPRLFAECAANVTIHVIDINDCPPVFSKPLYEASL 1889
Query: 60 LENAEIG-SLSTVNAT 74
L G + TVNAT
Sbjct: 1890 LLPTYKGVKIITVNAT 1905
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGTPPRSTIARVIVKILDENDNKPQF 1246
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIIE 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1620 IKTARELDRSNQVEYDLIVKATDQGNPPMSEMTSVHIAVTVADNASPKFTSKEYSVEISE 1679
Query: 62 NAEIGSL 68
IG+
Sbjct: 1680 AVGIGTF 1686
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2870 ITTLKELDHEERASYQIKVIASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2930 EDDPPGGVIAILSTTDA 2946
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE A ++ + +D + + LTD NDNAP+F S +I
Sbjct: 2548 QIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIG 2607
Query: 61 ENAEIGS 67
+A G+
Sbjct: 2608 SSAAKGT 2614
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K+ R LDREK+++Y L D+ P+ + + + D NDNAP F+ + +A +
Sbjct: 2724 EIKSIRSLDREKVSQYVLTVRASDKGTPSQSTTVTVIINVLDENDNAPRFSQIF-TAPVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + +GVN
Sbjct: 2783 ENAPLGYTVTRVTTSDEDVGVN 2804
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE A+Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREATAQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFRSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QPA + + + + DINDN P FA + I
Sbjct: 2103 EVRLTGELDREEVSNYTLTIVATDKGQPALSSSTEVAVIILDINDNNPIFAQALYKVEID 2162
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2163 ENTLTGT 2169
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D PA ++ + ++L D+NDN+P F V A I E
Sbjct: 639 LSTISSLDREEQAFYSLLVLAVDLGSPAQSSLTRVNVSLLDVNDNSPVFYPVQYFAHIQE 698
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+A+
Sbjct: 699 NEPAGSYITTVSAS 712
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK + LDRE + L D PA + + + D+NDN P FA + SA+I
Sbjct: 2313 ELKVIQSLDRETKEKCILLITATDSGSPALTGTGTVNVIVDDVNDNIPTFAHKMYSATIS 2372
Query: 61 ENAEIGS 67
E+A GS
Sbjct: 2373 EDAPTGS 2379
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-----AWECVSLITLTLTDINDNAPEFASVINS 56
+K A LDRE+I Y L V D A V+ + + + DIND+ P F+ ++
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNHGATPGAVARSSVASLVIFVNDINDHPPVFSQLVYR 479
Query: 57 ASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 VNLSEEAPPGSYVSGVSATDG 500
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E + +Y + +D P + + + + D+NDN+P F A IL
Sbjct: 2620 QVSISQHLDFEMVQKYVVWIEARDTGFPPFSSYEKLAIAVMDVNDNSPIFKEDPFVAEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN +L TV+A
Sbjct: 2680 ENLSPRTLLTVSA 2692
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E Y LN +D+ +P + + + D NDN P F SI EN
Sbjct: 1373 AKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSITENLP 1432
Query: 65 IGS 67
IGS
Sbjct: 1433 IGS 1435
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1793 ELIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITISDVNDHIPKFSRPVYSFDIP 1849
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1850 EDTTPGSL 1857
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D P+ + + +++ L D+NDNAP F S
Sbjct: 1998 LKVRQTLDRESQSFYNLVIQVHDMPLPSASSYTSTAQVSIILLDVNDNAPTFIS 2051
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P + I ++EN G+
Sbjct: 3468 LDRETLPVYNLTVLAVDLGTPSATGSASLLVTLEDINDNGPTLS--IREGEVMENKRAGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENAE 64
R LD E Y L AH +D + +++ + + D+NDN P F+ S S++EN
Sbjct: 1900 RSLDYETQQYYILTAHAEDG---GGQFMTIRVYFNILDVNDNPPVFSLTSYSTSLMENLP 1956
Query: 65 IGS 67
+GS
Sbjct: 1957 LGS 1959
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LDREK A Y+L DR + + + L DIND P F S ++ E
Sbjct: 2209 LSVAKPLDREKKAAYSLTVQSVDRGSSPRMDTTTVEIILLDINDFVPVFELSPYSINVPE 2268
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2269 N--LGTL 2273
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + + + +TD+NDNAP F E E
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVAIFVTDVNDNAPRFKKPSYYLDCPELTE 2886
Query: 65 IGS-LSTVNAT 74
IG+ ++ V+AT
Sbjct: 2887 IGAKVAQVSAT 2897
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE+ ++ LN + RDQ VS L +T D+ND P F+ S+ E
Sbjct: 535 AGGLDRERASQVVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQEAGYEVSVAE 592
Query: 62 NAEIGS 67
NA G+
Sbjct: 593 NAPAGT 598
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDYEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRFASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 12/65 (18%)
Query: 8 LDREKIARYTLN------AHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LDRE+ Y L H+Q +Q +++T+T+ D DN P F+ S + E
Sbjct: 749 LDREEKTAYQLQVVATDGGHLQSPNQ------AIVTITVLDTQDNPPVFSQATYSFVVFE 802
Query: 62 NAEIG 66
N +G
Sbjct: 803 NVALG 807
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++YTL D+ P + + + D NDNAP F+ + SAS+
Sbjct: 2748 EIRSIRPLDREKLSQYTLTIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQIF-SASVP 2806
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IG+N
Sbjct: 2807 ENAPLGFTVTRVTTSDEDIGMN 2828
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F+ + A + E
Sbjct: 192 LVSQGGLDREATPSYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPE 251
Query: 62 NAEIGS 67
+A +G+
Sbjct: 252 DAPVGA 257
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A ++L D P V+ + ++L D+NDN+P F V A I
Sbjct: 679 KLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQYFAHIQ 738
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ ++TV+AT
Sbjct: 739 ENEPAGTYVTTVSAT 753
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LD E I +Y + +D P + + +T+ D+NDNAPEF A I+
Sbjct: 2644 QLSVGQALDFEAIQKYVIWIEARDTGFPPFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIV 2703
Query: 61 ENAEIGSLSTVNA 73
EN L TV A
Sbjct: 2704 ENLSPRKLLTVAA 2716
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QP+ + + + + DINDN P FA + +
Sbjct: 2144 EVRLIGELDREAVSNYTLTVVATDKGQPSLSSSTDVIVIVLDINDNNPIFAQKLYRVELE 2203
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2204 ENTLTGT 2210
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE +Y L D PA IT+T+ D+NDN P FA + SA++
Sbjct: 2339 ELRLVQSLDRETKEQYVLLITAADSGSPALTGTGTITVTVDDVNDNVPTFAFNMYSAAVP 2398
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2399 EDAPTGT 2405
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F + SI+EN
Sbjct: 1414 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIP 1473
Query: 65 IGS 67
+GS
Sbjct: 1474 VGS 1476
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y+L D +++ + D NDN+P F I S +LEN +G
Sbjct: 1312 LDHEATASYSLVIQAVDSGAVPLSSTCTLSIDVLDENDNSPSFPKSILSVDVLENMRVGE 1371
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1372 LVSSVTAT 1379
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1834 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHIPKFSKPVYSFDIP 1890
Query: 61 ENAEIGSL 68
E+A GSL
Sbjct: 1891 EDATPGSL 1898
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 7 GLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILENAE 64
GLDRE ++ LN +D+ QP + L+ +T+ D+NDN P F+ S+ EN+
Sbjct: 567 GLDRETTSQVVLNISARDQGVQPKFSYAQLV-VTILDVNDNKPCFSQPEGYQVSLAENSP 625
Query: 65 IGS----LSTVNATIGVN 78
G+ LS V+ +G N
Sbjct: 626 SGTELLVLSAVDGDLGDN 643
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ +R L+RE RY + D W + +T+ +TD+NDNAP F
Sbjct: 2850 DITVSRLLNREDTDRYRIRVSAHDS---GWTVSTDVTVFVTDVNDNAPRF 2896
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA +DRE+ A Y L A +++ +T+ D+NDN+P F + S +++
Sbjct: 886 QITTASIIDREEQAFYQLKVVASGG---AVTGDTIVNITVKDLNDNSPHFIHAVESVNVV 942
Query: 61 ENAEIG 66
EN + G
Sbjct: 943 ENWKAG 948
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3492 LDREALPVYNLSLLAIDSGTPSATGSASLLVTLEDINDNGPTLST--RQGEVMENNRAGT 3549
Query: 68 L 68
L
Sbjct: 3550 L 3550
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE-----FASVINSASILEN 62
LD E +Y+L DR PA + + L D+NDN P F + AS+ EN
Sbjct: 310 LDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRFASVDEN 369
Query: 63 AEIGSL 68
A G++
Sbjct: 370 AAPGTV 375
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQAVYHL--LVRATDGGGRFCEASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 DVKVTKVLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSRGNYSVIIQ 3450
Query: 61 ENAEIGSLSTVNATIGVNRCGH 82
EN +G S + + N H
Sbjct: 3451 ENKPVG-FSVLQLVVTDNDSSH 3471
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVDVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A IGS+
Sbjct: 1574 SAAIGSV 1580
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVIDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDN P F+ +A I E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISEDA 3348
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYERSRQHTILVRAVDGGMPPLSSEVIVTVDVTDLNDNLPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ I + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQF 1245
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
+ T R LD E+ + + V D P E + +T+ + DIND P FA + AS+
Sbjct: 1829 IHTVRSLDYEETSIFQFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFARPLYEASL 1888
Query: 60 LENAEIG-SLSTVNAT 74
L G + TVNAT
Sbjct: 1889 LLPTYRGVKVITVNAT 1904
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRNNQVEYDLMVKATDKGSPPMSEITSVHIFVTIADNASPKFTSKEYSVEMSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|402584960|gb|EJW78901.1| hypothetical protein WUBG_10190, partial [Wuchereria bancrofti]
Length = 379
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE IARY L QDR P S++++ + D+ND AP+F S+ I E
Sbjct: 65 LRVVSKLDREMIARYELIVKAQDRGNPPLSSFSIVSIVIIDVNDYAPQFESLRYDLWIAE 124
Query: 62 NAEIGS 67
N+ IG+
Sbjct: 125 NSPIGT 130
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L D+ P+ + + + D NDNAP F+ + SA +L
Sbjct: 2724 EIRSIRPLDREKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVL 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ Y+L D P ++ I ++L D+NDN+P F V A I E
Sbjct: 641 LSTISSLDREEQGFYSLLVLATDLGSPPQSSIARINVSLLDVNDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 701 NEPGGSYITTVSATDPDLGLN 721
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P F S + +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLVITATDAGSPALTGTGTINVIVDDINDNVPTFPSKMYLTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 2620 QVSVSQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEIL 2679
Query: 61 EN 62
EN
Sbjct: 2680 EN 2681
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3468 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML--TISEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F + S +++
Sbjct: 847 QLTTASVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQTG 909
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVE 594
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 595 NAPTGTELLVLGATDG 610
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3081 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3138
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3139 ENTEPGTLLTRVQATDADAGLNR 3161
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3394 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3453
Query: 61 ENAEIG 66
EN +G
Sbjct: 3454 ENKPVG 3459
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2349 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2408
Query: 66 GSLST 70
G T
Sbjct: 2409 GHFVT 2413
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1622 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1681
Query: 62 NAEIGSL 68
IGS
Sbjct: 1682 TVSIGSF 1688
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3296 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3355
Query: 63 AEI 65
+ I
Sbjct: 3356 SVI 3358
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|326673363|ref|XP_003199858.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 794
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE IA Y + +D QP V +T+ ++D+NDN+PEF+S + ++E
Sbjct: 410 LVTTSALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYVME 469
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 470 NNAPGKSLFSVSAS 483
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE L D +P I + + DINDNAP F S + EN +
Sbjct: 200 KPLDREVTKSIKLQLTALDGGRPPKSGAMAIIIDVLDINDNAPVFTKDTYSVILNENTPV 259
Query: 66 G-SLSTVNAT 74
G ++ VNAT
Sbjct: 260 GTTILRVNAT 269
>gi|118403601|ref|NP_001072371.1| protocadherin gamma subfamily A, 11 [Xenopus (Silurana) tropicalis]
gi|111306114|gb|AAI21476.1| hypothetical protein MGC146652 [Xenopus (Silurana) tropicalis]
Length = 911
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDREK +YT+ D PA ++I L ++D+NDN P F+ + +A I E
Sbjct: 406 LVTSEHLDREKTPQYTIQLTASDLGSPALSNQTVILLNVSDVNDNRPVFSQSVYNAHIKE 465
Query: 62 NAEIGS-LSTVNAT 74
N E G+ L TV+AT
Sbjct: 466 NIEPGTLLCTVSAT 479
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D EK Y L D P E LI + + DINDN+PE N+ + E+A IG+
Sbjct: 308 VDFEKTHFYELFVKAVDGGTPRQEGRCLIQVEVEDINDNSPEIIFTSNANEVPEDAPIGT 367
Query: 68 L 68
+
Sbjct: 368 V 368
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+IA Y+L VQD P +T+ + D+NDNAP FA + + E
Sbjct: 1616 LSTAHALDREQIASYSLIVVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPE 1675
Query: 62 NAEIGSL 68
+ +G+L
Sbjct: 1676 DLPVGAL 1682
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD EK + L DR PA +++ + L D+NDN P F S + S+ E
Sbjct: 351 ITTAAPLDYEKDPQPQLTVLATDRGTPALSSSAVVHVALQDVNDNEPVFKSNFYNVSLKE 410
Query: 62 NAEIGS 67
N +G+
Sbjct: 411 NTPVGT 416
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEFASVINSASIL 60
L R LDRE A +TL VQ D P + + + + DINDN P F + SASI
Sbjct: 2437 LSLVRPLDREAQALHTLV--VQATDTPGGHFALVPVAIEVKDINDNKPYFPVEMLSASIR 2494
Query: 61 ENAEIGSLST 70
EN G+L T
Sbjct: 2495 ENLPPGTLVT 2504
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L L+RE++A++ L D P L+++ + D+ND AP F A ++E
Sbjct: 1410 LSIVGALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPVFEKPEYEAHVME 1469
Query: 62 NAEIGS 67
N GS
Sbjct: 1470 NLPAGS 1475
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
E+ T LDRE+ + + L VQD P I +T+ D NDNAP F V
Sbjct: 981 EVSTKHSLDREQQSNFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHV 1033
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE+ ++ L + +D P + + +T+ D ND+AP S S + EN
Sbjct: 1514 TTRALDREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLESESFSVEVPENQ 1573
Query: 64 EIGSLSTVNAT 74
+L T+ AT
Sbjct: 1574 SRVALYTLRAT 1584
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ +RYTL D E + +T+ + D+NDN P F V + E+ G+
Sbjct: 2121 LDHEQRSRYTLTLRASDTRH---ETEANLTVLVEDVNDNVPTFTQVFYQVLLPEHTPAGT 2177
Query: 68 -LSTVNAT 74
+ TV+AT
Sbjct: 2178 VILTVSAT 2185
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + Y+L D P + +++ DINDNAP F I
Sbjct: 26 DLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFNQSRYHTLIS 85
Query: 61 ENAEIGS 67
EN + GS
Sbjct: 86 ENLKPGS 92
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ AR LD E AR+ L +D P+ V L+ + + D ND AP F +
Sbjct: 1164 EIYAARELDYEAGARHVLQVSAEDTQHGYPSSRLV-LVQIHVQDCNDQAPTFPEDPITIV 1222
Query: 59 ILENAEIGS 67
+ ENA+ GS
Sbjct: 1223 VPENAQAGS 1231
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E I Y L DR P + +T+ D+NDN P F+ A + E A G+
Sbjct: 2338 LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEYRAVVSEAALPGT 2397
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 1468 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 1525
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 1526 ENTEPGTLLTRVQATDADAGLNR 1548
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 1781 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 1840
Query: 61 ENAEIG 66
EN +G
Sbjct: 1841 ENKPVG 1846
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 736 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 795
Query: 66 GSLST 70
G T
Sbjct: 796 GHFVT 800
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 9 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 68
Query: 62 NAEIGSL 68
IGS
Sbjct: 69 TVSIGSF 75
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 1683 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 1742
Query: 63 AEI 65
+ I
Sbjct: 1743 SVI 1745
>gi|291242490|ref|XP_002741140.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Saccoglossus kowalevskii]
Length = 2761
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE++A Y L A+ DR P I +T+ D+NDN+P+F S + + I E
Sbjct: 977 IRTDARLDREEVAVYNLEAYATDRGTPQRRTSVNIEITVKDVNDNSPKFRSAVINVEINE 1036
Query: 62 NAEIGSL 68
N+ IGSL
Sbjct: 1037 NSPIGSL 1043
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE +RY A QD+ P + I++T+ D+NDN P F + + E+A
Sbjct: 669 TTRELDRETTSRYDFVAVAQDQGDPPKSATTQISITILDVNDNPPTFTQSEYNVVVEEDA 728
Query: 64 EIG-SLSTVNAT 74
G S++TV AT
Sbjct: 729 RPGTSVATVTAT 740
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E + Y L QD +P + + + + D+NDN P F S + S+ E+ IGS
Sbjct: 568 IDYEITSNYRLVIRAQDSGRPPKSNSTNVVINVEDVNDNEPRFPSTLYQTSVREDLRIGS 627
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE YTL+ QD + + +T+ D+NDN P F I E+
Sbjct: 873 TKMELDRETKLSYTLHVTAQDNGLKPQLDTTDVEITVIDVNDNYPVFKESSYRGEIREDV 932
Query: 64 EIGS----LSTVNATIGVN-RCGHTFRGKD 88
G+ +S +A G+N R +TF G D
Sbjct: 933 SKGTSVIRISAEDADEGLNKRIRYTFSGGD 962
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + + LTL D+NDNAPEF++ ++ ++
Sbjct: 2078 ELKTLAPLDREEQAVY--NLLVKATDGGGRFCQAHVVLTLEDVNDNAPEFSADPHTITVF 2135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 2136 ENTEPGTLLTRVQATDADAGLNR 2158
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP FA S I
Sbjct: 2391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFAQGNYSVIIQ 2450
Query: 61 ENAEIG 66
EN +G
Sbjct: 2451 ENKPVG 2456
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 511 LYTSETLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 570
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 571 SAAVGSV 577
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + D+ + + + D+NDNAP+ + + S I+E
Sbjct: 88 IETADRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYSPEIME 147
Query: 62 NA 63
N+
Sbjct: 148 NS 149
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ AP F S S I E
Sbjct: 619 IKTAKELDRSNQVEYDLMVKATDKGSPPLSEITSVHIFVTIADNAAPRFTSKEYSVEISE 678
Query: 62 NAEIGSL 68
IGS
Sbjct: 679 TISIGSF 685
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A + E+A
Sbjct: 2293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVVSEDA 2348
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P V+ + + + D NDN P+F
Sbjct: 196 TSRKLDREQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQF 242
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P + +++ DINDN P F AS+
Sbjct: 2181 IQLEKPLDRELQAVYTLTVKAVDQGVPRRLTATGTVVVSVLDINDNPPVFEYREYGASVS 2240
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 2241 EDVLVGT 2247
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 1002 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 1059
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 1060 ENTEPGTLLTRVQATDADAGLNR 1082
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 270 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 329
Query: 66 GSLST 70
G T
Sbjct: 330 GHFVT 334
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 1217 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 1276
Query: 63 AEI 65
+ I
Sbjct: 1277 SVI 1279
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDREMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDREMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDREMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDREMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDREMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQAAYHL--LVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRENYSLIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPMG 3456
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE RYTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDNAP F+ +A + E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TAR LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTARELDRSNQVAYDLMVKATDKGDPPMSEITSVRVFVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
+GS
Sbjct: 1679 TVGVGSF 1685
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLRELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2929 EDDPPGGVIAIVST 2942
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L DR C + I L L D+NDNAPEF++ + ++
Sbjct: 3081 ELKTSAPLDREEQAVYHLLVRATDRG--GRFCQASIVLALEDVNDNAPEFSADPYAITVF 3138
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3139 ENTEPGTLLTRVQATDADSGLNR 3161
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3394 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3453
Query: 61 ENAEIG 66
EN +G
Sbjct: 3454 ENKPVG 3459
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ R+T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2349 RTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2408
Query: 66 GSLST 70
G T
Sbjct: 2409 GHFVT 2413
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TD+NDNAP F+ +V++ ++LE
Sbjct: 3296 LDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQ 3355
Query: 63 AEIGSLS 69
+ I L+
Sbjct: 3356 SVITVLA 3362
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P V+ + + +T ++ P+F S S I E
Sbjct: 1622 IKTAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISE 1681
Query: 62 NAEIGSL 68
IGS
Sbjct: 1682 TVSIGSF 1688
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + ILE
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILE 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQAAYHL--LVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE RYTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDNAP F+ +A + E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L DR P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTARELDRSNQVAYDLMVKATDRGDPPMSEITSVRVFVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVGIGSF 1685
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TAR LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLRELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2929 EDDPPGGVIAIVST 2942
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSAPLDREEQAAYHL--LVKATDGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE RYTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDNAP F+ +A + E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDA 3348
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L DR P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTARELDRSNQVAYDLMVKATDRGDPPMSEITSVRVFVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVGIGSF 1685
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TAR LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKLTITRVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLRELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2929 EDDPPGGVIAIVST 2942
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTLVPLDREEQAVY--NLLVKATDGGGRFCQAHIVLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ I S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKRIYSIIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNISVSDLGIPQKAAWHLLDIRVLDANDNPPEFLQERYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQFQQHKIFVRAVDSGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHATH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A I E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVISEDA 3348
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTAKELDRSNQVEYDLMVKATDKGSPPMSEITSVHIFVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
+GS
Sbjct: 1679 TISVGSF 1685
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + ++E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEVME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T+ LD E + R YTL D P E L TLTL ++NDN P F + +I
Sbjct: 519 VSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATLTLNNLNDNTPLFEKINCEGTI 578
Query: 60 LENAEIG-SLSTVNA 73
+ +G ++TV+A
Sbjct: 579 PRDLGVGEQITTVSA 593
>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
Length = 3260
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE+ + Y+L VQD P+ + + +++ D+NDN+P+F+S + + E
Sbjct: 1768 LSTSRPLDRERKSSYSLQVVVQDHGSPSLNSTASVEISVLDVNDNSPKFSSSSYTVDVSE 1827
Query: 62 NAEIGSLSTVNAT 74
+A IG L ++AT
Sbjct: 1828 DAAIG-LVVLDAT 1839
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD E I + ++ D +P +++ + L D NDN P F S + SI E
Sbjct: 494 ITTATKLDYETIPKPSIKVVATDGGRPPLSSTAVVEIDLQDTNDNEPVFGSSFYNVSIKE 553
Query: 62 N--------------AEIGSLSTVNATIG 76
N A+ GS T+ +IG
Sbjct: 554 NTSEGTCFLEVKADDADGGSFGTITYSIG 582
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE + Y L VQD P +T+ D NDNAP F+ IL
Sbjct: 1130 EISTRAALDREHQSSYQLMVVVQDGGTPPRSATGTAHITVLDENDNAPAFSHTQPGREIL 1189
Query: 61 ----ENAEIGS-LSTVNA 73
E GS L T+NA
Sbjct: 1190 IQVQEGLPAGSLLGTLNA 1207
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ R LDRE YT+ + +D P + + +T+ D NDNAP F S + E
Sbjct: 1664 ISATRVLDRELQDHYTITVYAKDGGIPPNFAKAKVHITVLDENDNAPAFGLQQYSLEVPE 1723
Query: 62 NAEIGSLSTVNAT 74
N + L T+ AT
Sbjct: 1724 NLQPVELFTLKAT 1736
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E ++ Y L V DR P +T+TD+NDN P F ++ E A
Sbjct: 2510 AERLDFEALSHYNLTVSVSDRGVPQRSSSVPAIITVTDVNDNPPVFGRAEYIVALSEGAA 2569
Query: 65 IGS 67
G+
Sbjct: 2570 AGA 2572
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVINSASILEN 62
AR LD EK +RYTL V D + A+ +I L + D ND+AP+F + I EN
Sbjct: 1349 ARELDYEKGSRYTLQIEVDDFSK-AYPNTHMIQLEINVQDSNDHAPQFPEDPVTIVIPEN 1407
Query: 63 AEIGS 67
+ GS
Sbjct: 1408 TQAGS 1412
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFAS---VIN-- 55
+ TA LDREK A Y + D A + +T+T+ D+NDNAP F +IN
Sbjct: 1872 ITTAALLDREKRASYFFQVYAVDLSPAAPRNSTAQVTVTILDVNDNAPFFIQDPLIINVS 1931
Query: 56 SASILENAEIGSLSTVNATIGVN 78
S S+ + + ++ + G N
Sbjct: 1932 SGSVFTHQVVATMRAEDKDFGAN 1954
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 2 LKTARGLDREKIARYTLNAHV---QDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+K R LDRE + N+HV Q D ++ I++ + DINDN P F +AS
Sbjct: 2612 MKLQRPLDRE-----SQNSHVVIVQASDGHGRFALAPISVEVKDINDNRPYFPIATLTAS 2666
Query: 59 ILENAEIGSLSTV 71
I EN + S TV
Sbjct: 2667 IRENQPLNSAVTV 2679
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE+ Y L +D P ++++ + D+ND AP F A I E
Sbjct: 1562 LSILKPLDREEQESYNLTIVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFERNEFEAQIRE 1621
Query: 62 NAEIGS 67
N G+
Sbjct: 1622 NQPAGT 1627
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL------ITLTLTDINDNAPEFASVIN 55
+KTAR LDRE +RD ++ V++ +++T+ DIND+AP F
Sbjct: 64 IKTARRLDRE------------ERDHYSFIAVTMTGFTVKVSITVNDINDHAPTFPKKKA 111
Query: 56 SASILENAEIGSLSTVNATIGVNRCGHTFRGKDLR 90
S I E +G+ ++ ++ T +G ++
Sbjct: 112 SLKIPEQTAVGTKFSLEPATDADKDQLTVQGYQIK 146
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 26/61 (42%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ Y L D P S T+ +TD+NDN P F +I E GS
Sbjct: 393 LDREERDSYELRVMATDSGTPPLHAESSFTIHVTDVNDNPPLFDQQAYKQTIPEVVYPGS 452
Query: 68 L 68
Sbjct: 453 F 453
>gi|312080128|ref|XP_003142468.1| hypothetical protein LOAG_06885 [Loa loa]
gi|307762369|gb|EFO21603.1| hypothetical protein LOAG_06885, partial [Loa loa]
Length = 1164
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE IARY L QDR P S +++ + D+ND AP+F S I E
Sbjct: 814 LRVVSKLDREMIARYELTVKAQDRGNPPLSSFSTVSIIIIDVNDYAPQFESSRYDLWIAE 873
Query: 62 NAEIGS 67
N+ IG+
Sbjct: 874 NSPIGT 879
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LDRE + R+ L +R PA S + + + D+ DNAP F A I
Sbjct: 212 EIRVGKALDRETLDRHVLKVTAYERLDPAVSASSSVIVEILDVQDNAPIFERNSYYAEIR 271
Query: 61 ENAEIG-SLSTVNA---TIGVN 78
E+A IG +L++V A IG+N
Sbjct: 272 EDAPIGTTLASVFARDLDIGLN 293
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ +DRE+ + Y LN V D + + + L DINDNAPEF S + +I E
Sbjct: 708 IMIAKEIDREERSSYLLNITVIDHATNPLSASTFLEIILNDINDNAPEFTSENYTVAIAE 767
Query: 62 NAEIGSLSTVNATIGVNR 79
+ G+ T A + ++
Sbjct: 768 DTPTGTSFTQVAAVDIDE 785
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE + + + D+ P +L+ + L D+NDNAP F + +I+E
Sbjct: 318 IQTAQHLDRELMNIIRIYVYATDKGVPPMTSRALLEINLLDVNDNAPVFEQEFFNVTIME 377
Query: 62 NAEIGS 67
N I S
Sbjct: 378 NITIPS 383
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ +Y L +D +P IT+ + DINDNAP F + ++ E
Sbjct: 527 ITTISKLDREEKEKYILKVKAEDGGEPPLSDSLFITIIIRDINDNAPYFEPNFYNITVPE 586
Query: 62 NAEIGS-LSTVNA 73
N G+ L TV A
Sbjct: 587 NEVRGTQLITVKA 599
>gi|57529059|ref|NP_001009586.1| protocadherin 2 alpha a 15 [Danio rerio]
gi|54013410|dbj|BAD60794.1| protocadherin1-alpha-av15-vCP [Danio rerio]
Length = 939
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE IA Y + +D QP V +T+ ++D+NDN+PEF+S + ++E
Sbjct: 410 LVTTSALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYVME 469
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 470 NNAPGKSLFSVSAS 483
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE L D +P I + + DINDNAP F + S ++ EN +G
Sbjct: 202 LDREVTKSIKLQLTALDGGRPPKSGKMTIIIDVLDINDNAPVFIKEVYSVTLNENTPVGT 261
Query: 67 SLSTVNAT 74
++ VNAT
Sbjct: 262 TILRVNAT 269
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3072 ELKTLAPLDREEQAIY--NLVVKATDGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVF 3129
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3130 ENTEPGTLLTRVQATDADAGLNR 3152
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3387 EVKVTKLLDRETISGYTLTVQASDNGNPPRVNTTTVNIDVSDVNDNAPVFSQGNYSVIIQ 3446
Query: 61 ENAEIG 66
EN +G
Sbjct: 3447 ENKPVG 3452
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1508 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1567
Query: 62 NAEIGSL 68
++ +GS+
Sbjct: 1568 SSAVGSV 1574
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDNAPEF + E
Sbjct: 770 LKILSPLDRETTDKYTLNVTVYDLGVPQKAAWHLLDIRVLDANDNAPEFLQESYFVEVSE 829
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 830 DKELSS 835
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ ++ D P +IT+ +TD+NDN P F I A I E+A
Sbjct: 2340 RTLDYEQFQQHRISVRAVDGGMPPLSSDVIITVDVTDLNDNPPLFDQQIYEARISEHAPH 2399
Query: 66 GSLST 70
G T
Sbjct: 2400 GHFVT 2404
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS---VINSASILENAE 64
LD E Y L D P+ V+ +++ +TDINDN P F+ V++ ++LE +
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTFVVSEDAVLEQSV 3350
Query: 65 I 65
I
Sbjct: 3351 I 3351
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ AP+F S S I E
Sbjct: 1613 IKTAKELDRSNQVEYDLMVKATDKGNPPMSEITSVHIFVTVADNAAPKFTSREYSVEISE 1672
Query: 62 NAEIGSL 68
IGS
Sbjct: 1673 AISIGSF 1679
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1195 TSRKLDREQQDEHILEVTVTDNGSPPRSTIARVIVKILDENDNKPQF 1241
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE Y L + D+ I + + D+NDNAP+ + + ++E
Sbjct: 1087 IETSDRLDRESTPHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEVME 1146
Query: 62 NA 63
N+
Sbjct: 1147 NS 1148
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE++A Y+L VQD P + + + D+NDNAP FA + E
Sbjct: 1770 LSTARALDREQVAFYSLTVVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASYVVEVPE 1829
Query: 62 NAEIGSL 68
+ +GSL
Sbjct: 1830 DLPVGSL 1836
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD EK + L DR PA +++ + L D+NDN P F S + S+ E
Sbjct: 507 ITTAAPLDYEKDPQPQLTVLATDRGTPALSSSAVVLVALQDVNDNEPVFRSNFYNVSLKE 566
Query: 62 NAEIGS 67
N +G+
Sbjct: 567 NTPVGT 572
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R L+RE++ ++ L D P L+++ + D+ND AP F A ++E
Sbjct: 1564 LSVVRALNREEVVQHNLTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEAHVME 1623
Query: 62 NAEIGS 67
N GS
Sbjct: 1624 NLPAGS 1629
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 26/53 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
EL T LDRE + Y L VQD P I +T+ D NDNAP F +
Sbjct: 1137 ELSTKHSLDRELQSSYQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPVFLHI 1189
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ AR LD E AR+TL +D P+ V L+ + + D ND AP F +
Sbjct: 1348 EIYAARELDYEARARHTLQVSAEDTQHGYPSSRLV-LVQILVQDCNDQAPTFPEDPITIV 1406
Query: 59 ILENAEIGS 67
+ ENA+ GS
Sbjct: 1407 VPENAQAGS 1415
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEFASVINSASILENA 63
AR LDRE A + L VQ D P + + + + D+NDN P F + SAS+ EN
Sbjct: 2615 ARPLDRETQASHALV--VQATDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMRENL 2672
Query: 64 EIGSLST 70
G+L T
Sbjct: 2673 PPGTLVT 2679
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T+ LD E A L+ + PA+ + + ++++D+NDNAP F S +S +
Sbjct: 822 QLHTSLPLDHESQAVLILDVQARSGSPPAYSN-TRVKISVSDVNDNAPTFPSPSDSILLP 880
Query: 61 ENAEIGS 67
E E G+
Sbjct: 881 EATEPGT 887
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE+ ++ L + QD P + + +T+ D ND+ P+ S S + EN
Sbjct: 1668 TTHPLDREEQEQHVLMVYAQDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQ 1727
Query: 64 EIGSLSTVNAT 74
+L T+ AT
Sbjct: 1728 SRVALYTLRAT 1738
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + Y+L D P + +++ DINDNAP F I
Sbjct: 182 DLVVSNVLDRENRSSYSLVLEAYDGGTPPRSSQMTLDVSIQDINDNAPAFNQSRYHTLIS 241
Query: 61 ENAEIGS 67
EN + GS
Sbjct: 242 ENLKPGS 248
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E I Y L DR P + +T+ D+NDN P FA ++ E+ G+
Sbjct: 2513 LDFEAIPVYNLTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGT 2572
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I Y+L +D+ P+ +L+ +T+ DINDN PEFA + S ++ EN IGS
Sbjct: 3684 LDREIIEGYSLTVEARDQGSPSLRNTTLVNITVADINDNFPEFARLAYSEAVKENISIGS 3743
Query: 68 -LSTVNA 73
++T++A
Sbjct: 3744 TITTLSA 3750
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RYTL V D P+ + + +T+ D+NDN+P F +++ S+ EN +GS
Sbjct: 4829 LDREMSPRYTLTVKVNDFGFPSLSAEAQVNITIADVNDNSPVFETLLYDFSLYENVSVGS 4888
Query: 68 -LSTVNAT---IGVN 78
L TV AT IG N
Sbjct: 4889 TLGTVKATDDDIGAN 4903
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE Y L V D P+ +++ + +TDI+DN P F I +AS
Sbjct: 8309 QLSIVRSLDRETKKNYDLTVAVSDSGVPSLSSTTVLKINVTDIDDNIPVFNQTIYNASAS 8368
Query: 61 ENAEIG-SLSTVNATIG 76
E+A +G S+ TV+AT G
Sbjct: 8369 EDAGLGNSIVTVSATDG 8385
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LDRE A Y L +D+ P+ + + IT+ + D+NDNAP F+ S + E
Sbjct: 6364 LTVAQTLDRESKAEYQLEVLAEDQGIPSLQSTASITVNVLDVNDNAPRFSVPPGSLFLNE 6423
Query: 62 NAEIG-SLSTVNAT 74
N +G SL+ + AT
Sbjct: 6424 NEPVGSSLAFITAT 6437
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L +DRE TL D P + + + +TD+NDNAPEF SASILE
Sbjct: 3985 LTVGGSIDREAFDTITLVVSAVDAGIPRLHSTTTVVVNITDVNDNAPEFTRRTYSASILE 4044
Query: 62 NAEIGSL 68
N+ +G
Sbjct: 4045 NSTVGQF 4051
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++Y+L D P+ I +T+TD+ND AP F ASI ENA +G
Sbjct: 6159 LDRENRSQYSLKIQASDGGLPSLSGEITIFVTVTDVNDEAPLFTEASYLASIAENASVGD 6218
Query: 68 L 68
L
Sbjct: 6219 L 6219
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDREK + Y+LN D P+ + T+T+ D NDN P F+ + +A + E
Sbjct: 1473 LEVTGSLDREKQSVYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSLYAAGVSE 1532
Query: 62 NAEIGSLSTVNATI 75
+ +G STV T+
Sbjct: 1533 SVAVG--STVPVTV 1544
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T + LDRE A Y L D P + + L D+NDNAP F + +
Sbjct: 8518 DLSTLKTLDRETQASYNLTVLAVDSGSPRLTGTATVAAILLDVNDNAPTFTQSVFVGRVE 8577
Query: 61 ENAEIGS----LSTVNATIGVN 78
ENA +GS LS + G+N
Sbjct: 8578 ENATLGSSVLLLSATDRDTGLN 8599
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKTAR LD E+ Y L V+D P + +T+ + D NDNAP F + A + E
Sbjct: 1160 LKTARNLDYERRQTYHLVVQVEDFGFPQHSGTAAVTVEVLDENDNAPVFNTTTVFADVPE 1219
Query: 62 NAEIGSL 68
N G++
Sbjct: 1220 NVATGTV 1226
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECV----SLITLTLTDINDNAPEFASVINSASILENA 63
LDRE R+ V + + V + + LT++++ND +P F+S++ SASILEN
Sbjct: 8631 LDRESRKRHVFEVQVANIHPGVQQSVLFDTAFVNLTISNVNDESPVFSSLLYSASILENR 8690
Query: 64 EIG-SLSTVNAT 74
G SL TV+A+
Sbjct: 8691 PPGQSLVTVSAS 8702
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
GLDRE + L+ V+DR P+ + + +T+ D+ND AP F +
Sbjct: 5039 GLDRESNPHFVLSLEVRDRGSPSLTAATTVNVTVEDVNDEAPVFTEI 5085
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LD E Y L D +P L+ +T+ D++D AP+F+ S+ E
Sbjct: 3782 LVTVKSLDHETKISYQLTVFAVDGGRPPLNSSVLVAITVIDVDDRAPQFSQGQFDISVSE 3841
Query: 62 NAEIGS-LSTVNA 73
N +GS L++V A
Sbjct: 3842 NVSVGSTLASVRA 3854
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T R LDRE +A Y+L D P+ + + +TD+ND AP +SAS
Sbjct: 5138 EIETNRALDRENVAAYSLKVLATDGGTPSLSSSVDVIVRVTDVNDKAPTVILARSSASYT 5197
Query: 61 ENAEIGSLSTVNATIGV 77
E+ GS V A + V
Sbjct: 5198 ES---GSPVPVAAGLAV 5211
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
LDRE RY+L +DR PA +T+ + DINDNAP F+
Sbjct: 2502 LDRELKTRYSLTVTARDRGSPALLTSVGVTVDVLDINDNAPVFS 2545
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TAR LDRE A Y L D + A E ++IT+ D NDNAPEFA A++ E
Sbjct: 8729 VTTARALDRETKAIYNLTVIATDGARSA-EVTAIITVQ--DDNDNAPEFAKSYR-ANVSE 8784
Query: 62 NAEIGSL----STVNATIGVNR 79
+A +G++ S + +G+N
Sbjct: 8785 SAPVGTVVLTASASDRDVGINE 8806
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L R LDRE+ +Y D P+ + + LT+ D+NDN P F I
Sbjct: 6575 LTVVRSLDRERTDQYRFRIKATDLGSPPSLPAYAFVNLTVEDVNDNPPVFDRSSYQTRIT 6634
Query: 61 ENAEIGSL 68
E ++GS+
Sbjct: 6635 EGTDVGSI 6642
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ AR LD E ++ + L D P+ + +T+ + ++N++AP F+ SI E
Sbjct: 4301 IEVARQLDHENVSVFNLTIEADDSGLPSLTATAALTIQIGNVNEHAPVFSQPEYEVSIYE 4360
Query: 62 NAEIGS 67
A +G+
Sbjct: 4361 TAGLGT 4366
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + L+RE+ Y L D PA S+I + + D+NDN P F ++ E
Sbjct: 4616 ISVSNSLNREETGFYRLTVAAIDGGSPALTGNSIIAVNVLDVNDNDPRFQQAKYVFNVSE 4675
Query: 62 NAEIGSLS 69
+A IGS++
Sbjct: 4676 DALIGSVA 4683
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++Y L D P+ S + + + D+ND+ P F+ + A+I E
Sbjct: 2599 LSTKGTLDRESTSQYDLIVEAFDLGVPSRSSNSSVRIMVEDVNDSPPTFSQFLYVATISE 2658
Query: 62 NAEIGS 67
A G+
Sbjct: 2659 AAPAGA 2664
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L A+ LDRE ++ Y L D + I + ++D+NDN P F V N
Sbjct: 1579 LTVAKSLDRETLSSYRLTIQASDGGTSPRSSTARIFVGVSDVNDNPPVFTGVAN 1632
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDR+ +R + Q+ P +L+T+TL D+NDN+P F +++ ENA
Sbjct: 3577 LDRDTESRIVFAVNAQESRSPFRTASVPALVTVTLLDVNDNSPVFNQSAYISAVSENALP 3636
Query: 66 GSLSTVNA 73
G + T+ A
Sbjct: 3637 GRIVTIVA 3644
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + + ++ +P+ + I + L D+NDN P FA + + +I E +G+
Sbjct: 10481 LDREKQDSFNVTVIAKEDKRPSVMANTTIEVALIDVNDNKPRFAVSMVTKTISETMSVGA 10540
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE + Y L D + +++ + D NDNAP FA+ +
Sbjct: 6257 QIAVLKPLDREAVNSYVLTILASDFASVNPMSSSATVSIQVLDSNDNAPVFATKSQRVDL 6316
Query: 60 LENAEIGSL-STVNAT---IGVN 78
EN +G+L + VNAT +G+N
Sbjct: 6317 FENVTVGTLVALVNATDRDLGLN 6339
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
EL LDREK + Y L + S + + + D+NDN P+ AS+
Sbjct: 1368 ELTVGNSLDREKTSSYRLTVTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANYEASV 1427
Query: 60 LENAEIG-SLSTVNAT---IGVN 78
+EN+ G S+ TV AT IG N
Sbjct: 1428 VENSPTGTSVLTVKATDDDIGSN 1450
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y+L V D + VS +T+ + D+NDN+P+F + AS+ E
Sbjct: 5942 LRTKDLLDREVKDSYSLPVTVTDG---LFSAVSNLTVVVDDVNDNSPQFNASSYFASLSE 5998
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTF----RGK 87
++++G +V I G TF RGK
Sbjct: 5999 GGGANRPVITVLASDSDVGENGSVTYQIVGGNSGSTFALRSRGK 6042
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITL--TLTDINDNAPEFASVINSASILEN 62
A LDRE +A YTL R P TL T+ D+ND P F S ++ E
Sbjct: 4513 ASELDREAVANYTLVVSAT-RAVPGRNLTGYATLFVTVGDVNDREPSFLSSFKEVNVSEG 4571
Query: 63 AEIG 66
IG
Sbjct: 4572 VPIG 4575
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R +D E + Y+L D P + +++ + D NDN P F + + EN +
Sbjct: 4932 RAVDYESVTNYSLIISASDGGSPTLSSTAAVSVRVLDTNDNPPVFVGGPFTVKVRENTPV 4991
Query: 66 G-SLSTVNA 73
S+ TV+A
Sbjct: 4992 STSVFTVSA 5000
>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
Length = 5085
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+IA Y L +D+ QP+ + + LT+ D NDN P+F + S ++
Sbjct: 2824 EISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLF-SVNVT 2882
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 2883 ENAEIGTF 2890
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE + YTL +DR +P + +T+T+ D NDN+P F SA++ E
Sbjct: 2192 LRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATVAE 2251
Query: 62 NAEIGS 67
NA IG+
Sbjct: 2252 NASIGA 2257
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR +P L+ +T+ D+NDN P F ++ E
Sbjct: 230 LETTGKLDREQVEFYSLNVCARDRGRPPRLGYLLVNVTVLDVNDNPPIFQQSDYVVALNE 289
Query: 62 NAEIGS-LSTVNAT 74
+A +G+ + TV+AT
Sbjct: 290 SAPVGTKVLTVHAT 303
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE A Y + +D+ P + + LTL D+NDN+P F I
Sbjct: 670 QLTTKVNLDRETTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPIP 729
Query: 61 ENAEIG-SLSTVNAT 74
E+A G S+ V AT
Sbjct: 730 EDAPPGTSVGKVTAT 744
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE +A YTL D P ++ + + D+ND+ PEF A++ EN
Sbjct: 2412 RPLDRELVAEYTLTLVAMDTGSPPLTGSGIVRIVVLDVNDHIPEFTRQEYRATVTENLAS 2471
Query: 66 GSLST 70
G+ T
Sbjct: 2472 GTWVT 2476
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDNAP F + ++A I+EN IG+
Sbjct: 1989 LDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEAGPHAADIVENTTIGT 2048
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE I Y L D P + I + L DINDN P F +
Sbjct: 3565 DIETAKQLDRETIPIYDLTIGAIDTGSPPQTGTAAIHIELLDINDNGPTFDPPEVVGYVN 3624
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 3625 ENEPAGTIVMTLSATDPDLPPNGAPFTYK 3653
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA V + + +TD NDNAP + I +A++
Sbjct: 2720 EVLVASGFDYETAPFYEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEAAIYNATVP 2779
Query: 61 EN 62
E+
Sbjct: 2780 ED 2781
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L D+ P + + + + D+ND+ P F SA + E + G
Sbjct: 464 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGS 523
Query: 67 ---SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 524 FVASISATDADSGLN 538
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE +Y L D Q +T+ +TD NDNAP F S S +
Sbjct: 1879 QLTLAEALDRETREKYVLKVRADDGLQ---HTDIALTIQVTDTNDNAPTFQSTAYSFDVP 1935
Query: 61 ENAEIGS 67
EN GS
Sbjct: 1936 ENVPRGS 1942
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN D + V+++T+ ++DINDN P F I A + EN+ S
Sbjct: 3254 LDYDLVQEYKLNITATDLGFEPKQAVAILTVNVSDINDNPPTFNQSIYEAYLPENSPPDS 3313
Query: 68 L 68
Sbjct: 3314 F 3314
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
E+ T LDRE+ A Y L QD +P V+L T+ + D+NDNAP F+S
Sbjct: 2511 EVLTVVPLDREQTAVYHLTLVAQDSSPTEPQASAVNL-TIFVKDVNDNAPRFSS 2563
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ LD E++ +YTLN D P V+ + + + D NDN P F + + I E
Sbjct: 1416 KPLDYEELEKYTLNVTCSDGGHPRLSSVTTLIVEVIDANDNPPVFPNTAIARQIRE 1471
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW+ + +T+T+ D NDN PEF
Sbjct: 2934 LDREEQDEYLLKLVAADG---AWQAATALTITIQDQNDNPPEF 2973
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE++ Y L D QPA +S L+ + + DINDNAP F S+ SA
Sbjct: 1520 IHTLLPIDREEVDTYKLVVVATDSAQPASARLSAEKLVIVIVEDINDNAPIFVSM--SAV 1577
Query: 59 IL 60
+L
Sbjct: 1578 VL 1579
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
LKT R LDRE + + L V+D P IT+ +TD ND+ SV
Sbjct: 3672 LKTTRSLDREAMPQLDLVVEVEDSGVPRMRSEHTITVIVTDQNDSPSSPRSV 3723
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC----VSLITLTLTDINDNAPEFASVINSA 57
++ A+ L+ E+ +RY L +D E + +T+T+ DINDNAP F A
Sbjct: 2297 IRVAKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLA 2356
Query: 58 SILEN 62
++EN
Sbjct: 2357 HVMEN 2361
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1852 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1911
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ +S V+A +GVN
Sbjct: 1912 APLGTSVVQISAVDADLGVN 1931
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 409 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 468
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 831 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 889
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 890 SAELGA 895
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 184 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 243
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 244 ENATVGT 250
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1264 IRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1323
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1324 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1356
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1058 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1117
Query: 68 LSTV 71
+ V
Sbjct: 1118 VVGV 1121
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1154 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1204
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1852 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1911
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ +S V+A +GVN
Sbjct: 1912 APLGTSVVQISAVDADLGVN 1931
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 409 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 468
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 831 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 889
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 890 SAELGA 895
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 184 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 243
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 244 ENATVGT 250
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1264 IRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1323
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1324 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1356
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1154 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1204
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1058 LDRETRDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1117
Query: 68 LSTV 71
+ V
Sbjct: 1118 VVGV 1121
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1905 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1964
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ +S V+A +GVN
Sbjct: 1965 APLGTSVVQISAVDADLGVN 1984
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 462 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 521
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 884 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 942
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 943 SAELGA 948
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 297 ENATVGT 303
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1317 IRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1376
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1377 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1409
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1111 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1170
Query: 68 LSTV 71
+ V
Sbjct: 1171 VVGV 1174
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1207 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1257
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++Y L D+ P + + + D NDNAP F+ + +A +
Sbjct: 2892 EIRSIRSLDREKVSQYVLTVRCSDKGTPPQSTTVTVIINVLDENDNAPRFSQIF-TAPVP 2950
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IGVN
Sbjct: 2951 ENAPLGYTVTRVTTSDEDIGVN 2972
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE A Y L V+D+ +P + +T+ DINDN P F S A + E+A +G
Sbjct: 375 GLDREATAYYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVG 434
Query: 67 S----LSTVNATIGVN 78
S +S +A G N
Sbjct: 435 SSVLQVSAADADEGTN 450
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP + + + + DINDN P FA + I
Sbjct: 2271 EVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVAVIILDINDNNPVFAKALYKVEIN 2330
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2331 ENTLTGT 2337
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ + ++L D+NDN+P F V A I E
Sbjct: 807 LSTISSLDREEQAFYSLLVLAVDLGSPPQTSLTRVNVSLLDVNDNSPVFYPVQYFAHIQE 866
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+A+
Sbjct: 867 NEPAGSYITTVSAS 880
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK + LDRE + L D PA + + ++D+NDN P FA SA+I
Sbjct: 2481 ELKVRQKLDRETKEKCILLITATDSGSPALTGTGTVNVIVSDVNDNVPTFAHKTYSATIS 2540
Query: 61 ENAEIGS 67
E+A GS
Sbjct: 2541 EDAPTGS 2547
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-RDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ ++
Sbjct: 588 IKVASALDRERIPSYNLTVSVSDNHGAPPGAVARSSVASLVIFVNDINDHPPVFSQLVYR 647
Query: 57 ASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 648 VNLSEEAPPGSYVSGVSATDG 668
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LDREK A Y+L DR + + + L DIND P F S +I E
Sbjct: 2377 LSVAKPLDREKKAMYSLTVQSADRGSSPRMDTTKVDIILLDINDFVPVFELSPYSINIPE 2436
Query: 62 NAE 64
N E
Sbjct: 2437 NLE 2439
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E Y LN +D+ +P + + + D NDN P F SI EN
Sbjct: 1541 AKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSITENLP 1600
Query: 65 IGS 67
IGS
Sbjct: 1601 IGS 1603
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1961 ELIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITISDVNDHIPKFSRPVYSFDIP 2017
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 2018 EDTTPGSL 2025
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E + +Y + +D P + + + + D+NDN+P F A IL
Sbjct: 2788 QVSISQQLDFETVQKYVVWIEARDAGFPPFSSYEKLAIAVLDVNDNSPVFKDDPFVAEIL 2847
Query: 61 ENAEIGSLSTVNA 73
EN ++ TV+A
Sbjct: 2848 ENLSPRTILTVSA 2860
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENAE 64
R LD E Y L A +D + +++ I + D+NDN P F+S S S++EN
Sbjct: 2068 RSLDYETRQYYILTARAEDG---GGQFMTIRIYFNILDVNDNPPVFSSTSYSTSLMENLP 2124
Query: 65 IGS 67
+GS
Sbjct: 2125 LGS 2127
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + + + +TD+NDNAP F E E
Sbjct: 2998 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVAIFVTDVNDNAPRFKKPSYYLDCPELTE 3054
Query: 65 IGS-LSTVNAT 74
IG+ ++ V+AT
Sbjct: 3055 IGAKVAQVSAT 3065
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 2 LKTARGLDREKIARYTLN------AHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
+ T LDRE+ Y L H+Q +Q +++T+T+ D DN P F+ +
Sbjct: 911 ISTKMVLDREEKTAYQLQVVATDGGHLQSPNQ------AIVTITVLDTQDNPPVFSQAVY 964
Query: 56 SASILENAEIG 66
S + EN +G
Sbjct: 965 SFVVFENVALG 975
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P + + +TL DINDN P ++ ++EN G+
Sbjct: 3636 LDRETLPVYNLTVLAVDLGTPPATGSASLLVTLEDINDNGPTLST--KEGEVMENKRAGT 3693
Query: 68 L 68
L
Sbjct: 3694 L 3694
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 479 LDYEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRFASVDEN 538
Query: 63 AEIGSL 68
A++G++
Sbjct: 539 AQVGTV 544
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE+ ++ LN + RDQ VS L +T D+ND P F+ S+ E
Sbjct: 703 AGGLDRERASQVVLN--ISARDQGVHPKVSYAQLIVTVLDVNDEKPVFSQEAGYEVSVAE 760
Query: 62 NAEIGS 67
NA G+
Sbjct: 761 NAPAGT 766
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V E +++ +T+ D+NDNAP F + +++
Sbjct: 1013 QLTTASIIDREEQSFYQLKV-VASGGMVTGE--TIVNITVKDLNDNAPHFLQAVEWVNVV 1069
Query: 61 ENAEIG 66
EN + G
Sbjct: 1070 ENWQAG 1075
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E A Y+L D + +++ + D NDN P F +LEN
Sbjct: 1436 AGQLDHEATASYSLLIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMR 1495
Query: 65 IGSLST-VNAT 74
IG L T V AT
Sbjct: 1496 IGELVTSVTAT 1506
>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Bombus impatiens]
Length = 4964
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+IA Y L +D+ QP+ + + LT+ D NDN P+F + S ++
Sbjct: 2741 EISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLF-SVNVT 2799
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 2800 ENAEIGTF 2807
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE + YTL +DR +P + +T+T+ D NDN+P F SA++ E
Sbjct: 2109 LRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATVAE 2168
Query: 62 NAEIGS 67
NA IG+
Sbjct: 2169 NASIGA 2174
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR +P L+ +T+ D+NDN P F ++ E
Sbjct: 164 LETTGKLDREQVEFYSLNVCARDRGRPPRLGYLLVNVTVLDVNDNPPIFQQSDYVVALNE 223
Query: 62 NAEIGS-LSTVNAT 74
+A +G+ + TV+AT
Sbjct: 224 SAPVGTKVLTVHAT 237
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE A Y + +D+ P + + LTL D+NDN+P F I
Sbjct: 604 QLTTKVNLDRETTAEYQILVIAKDQGTPPQSSTATVILTLEDVNDNSPVFYPWRYLMPIP 663
Query: 61 ENAEIG-SLSTVNAT 74
E+A G S+ V AT
Sbjct: 664 EDAPPGTSVGKVTAT 678
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE +A YTL D P ++ + + D+ND+ PEF A++ EN
Sbjct: 2329 RPLDRELVAEYTLTLVAMDTGSPPLTGSGIVRIVVLDVNDHIPEFTRQEYRATVTENLAS 2388
Query: 66 GSLST 70
G+ T
Sbjct: 2389 GTWVT 2393
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDNAP F + ++A I+EN IG+
Sbjct: 1906 LDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEAGPHAADIVENTTIGT 1965
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE I Y L D P + I + L DINDN P F +
Sbjct: 3445 DIETAKQLDRETIPIYDLTIGAIDTGTPPQTGTAAIHIELLDINDNGPTFDPPEVVGYVN 3504
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 3505 ENEPAGTIVMTLSATDPDLPPNGAPFTYK 3533
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA V + + +TD NDNAP + I +A++
Sbjct: 2637 EVLVASGFDYETAPFYEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEAAIYNATVP 2696
Query: 61 EN 62
E+
Sbjct: 2697 ED 2698
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L D+ P + + + + D+ND+ P F SA + E + G
Sbjct: 398 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGS 457
Query: 67 ---SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 458 FVASISATDADSGLN 472
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE +Y L D Q +T+ +TD NDNAP F S S +
Sbjct: 1796 QLTLAEALDRETREKYVLKVRADDGLQ---HTDIALTIQVTDTNDNAPTFQSTAYSFDVP 1852
Query: 61 ENAEIGS 67
EN GS
Sbjct: 1853 ENVPRGS 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFASVINSAS 58
L T + LDRE+ Y L D P C +T+ L D+ND +PEF S S
Sbjct: 2004 LFTRKLLDREQKPLYNLILSATDSPLPPALPLSCTVQVTVVLLDVNDMSPEFISP-TKIS 2062
Query: 59 ILENAEIGSLSTVNATIGVNR 79
I+ENA S + V A V+R
Sbjct: 2063 IIENAP--SNTVVMAIKAVDR 2081
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ LD E++ +YTLN D P V+ + + + D NDN P F + + I E
Sbjct: 1350 KPLDYEELEKYTLNVTCSDGGHPRLSSVTTLIVEVIDANDNPPVFPNTAIARQIRE 1405
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW+ + +T+T+ D NDN PEF
Sbjct: 2851 LDREEQDEYLLKLVAADG---AWQAATALTITIQDQNDNPPEF 2890
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
E+ T LDRE+ + Y L QD +P V+L T+ + D+NDNAP F+S
Sbjct: 2428 EVLTVVPLDREQTSVYHLTLVAQDSSPTEPQASAVNL-TIFVKDVNDNAPRFSS 2480
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE++ Y L D QPA +S L+ + + DINDNAP F S+ SA
Sbjct: 1454 IHTLLPIDREEVDTYKLVVVATDSAQPASARLSAEKLVIVIVEDINDNAPIFVSM--SAV 1511
Query: 59 IL 60
+L
Sbjct: 1512 VL 1513
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDIND--NAPEFASVINSASI 59
LKT R LDRE + + L V+D P IT+ +TD ND ++P VI S
Sbjct: 3552 LKTTRSLDREAMPQLDLVVEVEDSGVPRMRSEHTITVIVTDQNDSPSSPRSVHVI-VHSF 3610
Query: 60 LENAEIGSLSTVNA 73
E +G ++ V+
Sbjct: 3611 NEQIPLGKIADVHP 3624
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC----VSLITLTLTDINDNAPEFASVINSA 57
++ A+ L+ E+ +RY L +D E + +T+T+ DINDNAP F A
Sbjct: 2214 IRVAKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLA 2273
Query: 58 SILEN 62
++EN
Sbjct: 2274 HVMEN 2278
>gi|193207741|ref|NP_506256.3| Protein FMI-1 [Caenorhabditis elegans]
gi|37048691|gb|AAQ84880.1| flamingo-like protein FMI-1 [Caenorhabditis elegans]
gi|169402906|emb|CAB01427.3| Protein FMI-1 [Caenorhabditis elegans]
Length = 2596
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ A L +DR P+ S ITLTL+D+NDNAP F + I E
Sbjct: 844 LRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAE 903
Query: 62 NAEIGS 67
N+ +GS
Sbjct: 904 NSPVGS 909
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P E +++ +T+ D+NDNAP FAS + +ILE
Sbjct: 327 IQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILE 386
Query: 62 NAEIGS-LSTVNAT 74
N I + ++TV AT
Sbjct: 387 NITIPAVIATVKAT 400
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LDRE ARY+L +D P+ + I + L DINDNAP F + +I E
Sbjct: 533 IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISE 592
Query: 62 NAEIGS 67
GS
Sbjct: 593 EMPRGS 598
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A +++ D P + I + L DINDN+P+F S +A+I
Sbjct: 735 DISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATIS 794
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+ +G+ +S ++A IG N
Sbjct: 795 EDIPVGTSFLQVSAIDADIGPN 816
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ +DRE + ++ L +R P + + + + D+ DN+P F I
Sbjct: 221 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIR 280
Query: 61 ENAEIGS 67
E+A IG+
Sbjct: 281 EDAPIGT 287
>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE ARY L QD+ P + + +++ DIND++P+F S +A I E
Sbjct: 1043 LSTSRPLDREVRARYMLTVTAQDQGHPPLSSTATVEVSVLDINDHSPQFESSAYTADIPE 1102
Query: 62 NAEIGS 67
+ IGS
Sbjct: 1103 DIPIGS 1108
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 4 TARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
TA LDREKIA YT D P + +T+++ D+NDNAP F ++
Sbjct: 1149 TAAPLDREKIASYTFKVCATDSSPLNPR-NSTAEVTISVQDVNDNAPFFI----QDPLIV 1203
Query: 62 NAEIGSLST 70
N IGS+S+
Sbjct: 1204 NVSIGSVSS 1212
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE YT+ + +D P + + + + D NDN P F + S + E
Sbjct: 939 ITTTKALDRELREYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNTPYFGRLYYSIEVPE 998
Query: 62 NAEIGSLSTVNA 73
N E L T+ A
Sbjct: 999 NLEAMPLFTLRA 1010
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
AR LD E+ +RY+L V D Q P+ V L + + D ND+AP+F + I E+
Sbjct: 624 ARPLDYEQYSRYSLQIEVDDLSQVMPSSTLVHL-NIEVEDSNDHAPQFPEDPITVVIPES 682
Query: 63 AEIGS 67
E GS
Sbjct: 683 MESGS 687
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE+ + L +D P L+ + + D+ND P F A + E
Sbjct: 837 LSILKPLDREEQDIFNLTITAEDHGMPQQSSAQLLCVHVIDVNDEVPWFEETQYEAQVSE 896
Query: 62 NAEIG-SLSTVNAT 74
N G S+ TV+A+
Sbjct: 897 NQPSGTSVLTVSAS 910
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
E+ T LDRE+ + Y L VQD P +T+ D NDN P F
Sbjct: 409 EMSTKTVLDREQQSSYQLVVLVQDGGSPPRSATGTAFITVLDDNDNDPAF 458
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE++A Y+L VQD P + + + D+NDNAP FA + E
Sbjct: 1500 LSTARALDREQVAFYSLTVVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASYVVEVPE 1559
Query: 62 NAEIGSL 68
+ +GSL
Sbjct: 1560 DLPVGSL 1566
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD EK + L DR PA +++ + L D+NDN P F S + S+ E
Sbjct: 507 ITTAAPLDYEKDPQPQLTVLATDRGTPALSSSAVVLVALQDVNDNEPVFRSNFYNVSLKE 566
Query: 62 NAEIGS 67
N +G+
Sbjct: 567 NTPVGT 572
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
EL T LDRE+ + Y L VQD P I +T+ D NDNAP F +
Sbjct: 1137 ELSTKHSLDREQQSSYQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHI 1189
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R L+RE++ ++ L D P L+++ + D+ND AP F A I E
Sbjct: 1294 LSVVRALNREEVVQHNLTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEAHITE 1353
Query: 62 NAEIGS 67
N GS
Sbjct: 1354 NLPAGS 1359
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEFASVINSASILENA 63
AR LDRE A + L VQ D P + + + + D+NDN P F + SAS+ EN
Sbjct: 2358 ARPLDRETQALHALV--VQAMDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMRENL 2415
Query: 64 EIGSLST 70
G+L T
Sbjct: 2416 PPGTLVT 2422
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + Y+L D P + +++ DINDNAP F I
Sbjct: 182 DLVVSNVLDRENRSSYSLVLEAYDGGSPPRSSQMTLDVSVQDINDNAPTFNQSRYHTLIS 241
Query: 61 ENAEIGS 67
EN + GS
Sbjct: 242 ENLKPGS 248
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + Y+L D E + +T+ + D+NDNAP F+ ++ E+ GS
Sbjct: 2039 LDYEQRSHYSLTLRASDSRH---ETEANLTVIVEDVNDNAPAFSQAFYQVTLPEHTPAGS 2095
Query: 68 -LSTVNAT 74
L T++AT
Sbjct: 2096 ILLTMSAT 2103
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E I Y L DR P + +T+ D+NDN P FA ++ E+ G+
Sbjct: 2256 LDFEAIPVYNLTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGT 2315
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE+ ++ L + +D P + + +T+ D ND+ P+ S S + EN
Sbjct: 1398 TTHPLDREEQEQHVLMVYARDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQ 1457
Query: 64 EIGSLSTVNAT 74
+L T+ AT
Sbjct: 1458 SRVALYTLRAT 1468
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I +TL D+NDNAPEF++ + ++
Sbjct: 3080 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVVTLEDVNDNAPEFSADPYAITVF 3137
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3138 ENTEPGTLLTRVQATDADAGLNR 3160
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3393 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3452
Query: 61 ENAEIG 66
EN +G
Sbjct: 3453 ENKPVG 3458
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E ++ L V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVSPAHLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1622 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1681
Query: 62 NAEIGSL 68
IGS
Sbjct: 1682 TVSIGSF 1688
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3354
Query: 63 AEI 65
+ I
Sbjct: 3355 SVI 3357
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+N N P F I A I E+A
Sbjct: 2349 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNGNPPLFEQQIYEARISEHAPH 2408
Query: 66 GSLST 70
G T
Sbjct: 2409 GHFVT 2413
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDRE +A+Y L DR P + + + D NDNAP+F+ + SA +
Sbjct: 2768 EIRSVRPLDRENVAQYMLTIKASDRGTPVQSASVQVLINVLDENDNAPKFSQIF-SALVP 2826
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++T + IGVN
Sbjct: 2827 ENAPLGYTVTRVTTSDEDIGVN 2848
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE Y L V+D+ +P + +T+ DINDN P F+ + A + E+A +G
Sbjct: 197 GLDREATPAYQLLLQVEDKGEPRKRGYLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVG 256
Query: 67 S 67
+
Sbjct: 257 A 257
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ Y+L D P V + ++L D+NDN+P F V A I E
Sbjct: 685 LSTISQLDREEQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLFYPVQYFAHIQE 744
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+A+ +G+N
Sbjct: 745 NEPAGSYVATVSASDPDLGIN 765
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P+F SI+EN
Sbjct: 1419 AKALDFETQSMYKLNITAKDKGRPPQSSTMSVVIYVRDYNDNPPKFPPGDIFKSIVENIP 1478
Query: 65 IGS 67
+GS
Sbjct: 1479 VGS 1481
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2149 EVRLTGELDRETVSNYTLTIIATDKGQPSLSSSTNVVVVVLDINDNNPVFAQKLYKIEIA 2208
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2209 ENILTGT 2215
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDREK +Y + D P I + + D+NDN P+FA + +I
Sbjct: 2359 DIHLVKSLDREKKEQYVMLITATDSGSPTLTGTGTIAVKVDDVNDNIPKFAFNMYLKTIP 2418
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2419 EDAPTGT 2425
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y+L D + V + + + D NDN+P F +LEN IG
Sbjct: 1317 LDHEATASYSLTIQAVDSGAVSLSSVCTLNIEVLDENDNSPSFPKSTLFVDVLENMRIGE 1376
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1377 LVSSVTAT 1384
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN+P F
Sbjct: 2870 DITISRLLNREDADRYRIRVSAHDS---GWTVSTDVTIFVTDINDNSPRFTKPSYYLDCP 2926
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ ++AT
Sbjct: 2927 ELNEIGSKVTQISAT 2941
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ LD E I +Y + +D P + + + +T+ DINDN P F ++E
Sbjct: 2665 FSISQPLDYEAIQKYVVWIEARDMGFPPFSSYAKLEITVIDINDNMPVFEQDPFIVEVVE 2724
Query: 62 NAEIGSLSTVNA 73
N + TV A
Sbjct: 2725 NIPPSKIITVTA 2736
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1839 ELIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHIPKFSKLWYSFDIP 1895
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1896 EDTTPGSL 1903
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA +DRE+ A Y L A +L+ +T+ D+NDN+P F + S ++E
Sbjct: 892 ITTASVIDREEQAFYQLKVVASGG---AIAGDALVNITVKDLNDNSPHFLHAVESVDVVE 948
Query: 62 NAEIG 66
N G
Sbjct: 949 NWSTG 953
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P ++ I+EN+ G+
Sbjct: 3512 LDRETLPVYNLCVLAIDSGAPSATGSASLLITLEDINDNGPILSTT--EGEIMENSRAGT 3569
Query: 68 L 68
L
Sbjct: 3570 L 3570
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LDREK Y+L DR + +++ L D+ND P F S ++ E
Sbjct: 2255 ITVGKSLDREKKPSYSLTVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPYSVNVPE 2314
Query: 62 NAE 64
N E
Sbjct: 2315 NLE 2317
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LD E ++ ++ D A IT+ + D+NDN+P F+ S+LE
Sbjct: 3190 LSLAKPLDYEVCQKHEMSISAIDGGWVARTGYCSITVNVIDVNDNSPVFSPEDYFPSVLE 3249
Query: 62 NAEIGS----LSTVNATIGVN 78
NA G+ LS +A G N
Sbjct: 3250 NAPSGTTVIHLSATDADSGSN 3270
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE RYTL DR +++ L D+NDN P F S N A
Sbjct: 1095 QLYIKSELDRELQERYTLVVAASDRAVEPLSATVNVSVILEDVNDNRPLFNST-NYAFYY 1153
Query: 61 ENAEIG 66
E ++G
Sbjct: 1154 EEEQVG 1159
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G++R
Sbjct: 3136 ENTEPGTLLTRVQATDADAGISR 3158
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3298 EVKVTRLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3357
Query: 61 ENAEIG 66
EN +G
Sbjct: 3358 ENKPVG 3363
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSGKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ +T+ D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVTVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEF 50
+K AR LDRE + L +D R++P ++ ++L D+NDN P F
Sbjct: 877 VKIARSLDRELQHEHYLKIEARDQAREEPQLSSTVVVKVSLEDVNDNPPTF 927
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3200 LDYESSHEYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTTVISEDAVLEQ 3259
Query: 63 AEI 65
+ I
Sbjct: 3260 SVI 3262
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I LTL D+NDNAPEF + + ++
Sbjct: 3079 ELKTLAPLDREEQAVY--NLLVKATDGGGRFCQASIVLTLEDVNDNAPEFTADPYTITVF 3136
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3137 ENTEPGTLLTRVQATDADTGLNR 3159
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EVKVTKLLDRETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPLFSKGNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1515 LSTCEKLDHEAVHQHILTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1575 SAAVGSV 1581
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 775 LKILSPLDRETTDKYTLNMTVYDLGIPQKAAWRLLDIVILDANDNPPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ EI S
Sbjct: 835 DKEINS 840
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2347 RTLDYEQFQQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHAIH 2406
Query: 66 GSLST 70
G T
Sbjct: 2407 GHFVT 2411
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V + + +TDINDN P F+ +A I E+A
Sbjct: 3294 LDYESAHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPAFSQDTYTAVISEDA 3349
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ I + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE+ A YTL D+ P + +++ DINDN P F A++
Sbjct: 3182 IQLEKPLDREQQAVYTLTLKAVDQGLPRRLSATGTVIVSVLDINDNPPVFEYREYGATVS 3241
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3242 EDVLIGT 3248
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1200 TSRRLDREQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQF 1246
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1620 IKTAKELDRSHQEEYDLMVKAADKGNPPMSEMTSVHIFVTIADNASPKFTSREYSIEISE 1679
Query: 62 NAEIGSL 68
IGS
Sbjct: 1680 TISIGSF 1686
>gi|348503598|ref|XP_003439351.1| PREDICTED: cadherin-6-like [Oreochromis niloticus]
Length = 746
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE+ A YTL+A V DR+ A E + + + DINDNAP+FA I AS+
Sbjct: 70 DIHATKRLDREEKAMYTLHAKVLDRNTNAELEPDTEFNIKIHDINDNAPKFAKEIYFASV 129
Query: 60 LENAEIG-SLSTVNAT 74
E +E+G S++TV AT
Sbjct: 130 PEMSEVGTSVATVTAT 145
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + ++ + + P + + + D+NDNAPEFA ++ + E
Sbjct: 399 ITTLKALDRETSKWHNISVVATEINNPRQTTRVPVFIKVLDVNDNAPEFAMSYDTF-VCE 457
Query: 62 NAEIGSLSTVNATIGVNR--CGHTF 84
N + G L + + + GH F
Sbjct: 458 NVKAGQLIQTISAVDTDEPLVGHKF 482
>gi|326673321|ref|XP_003199838.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 792
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE IA Y + +D QP V +T+ ++D+NDN+PEF+S + ++E
Sbjct: 410 LVTTSALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYVME 469
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 470 NNAPGKSLFSVSAS 483
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE L D +P I + + DINDNAP F + S ++ EN +G
Sbjct: 202 LDREVTKSIKLQLTALDGGRPPKSGKMTIIIDVLDINDNAPVFIKEVYSVTLNENTPVGT 261
Query: 67 SLSTVNAT 74
++ VNAT
Sbjct: 262 TILRVNAT 269
>gi|292620525|ref|XP_001921777.2| PREDICTED: protocadherin gamma-A4-like [Danio rerio]
Length = 796
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE IA Y + +D QP V +T+ ++D+NDN+PEF+S + ++E
Sbjct: 410 LVTTSALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYVME 469
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 470 NNAPGKSLFSVSAS 483
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE L D +P I + + DINDNAP F S + EN +G
Sbjct: 202 LDREVTKSIKLQLTALDGGRPPKSGAMAIIIDVLDINDNAPVFTKDTYSVILNENTPVGT 261
Query: 67 SLSTVNAT 74
++ VNAT
Sbjct: 262 TILRVNAT 269
>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
Length = 2493
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDREK+ YTL QD+ P + +TL D+ND P+F+ + SA+I E+ +
Sbjct: 190 KKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPV 249
Query: 66 GSL-STVNAT 74
L +TV AT
Sbjct: 250 NQLVTTVRAT 259
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK+ ++T +D+ P E + IT+TL DINDN P+F+ SI EN+ G+
Sbjct: 400 LDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGT 459
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T RGLDRE + R+ +D +P+ E +T+ + D+NDN P F I +A I E
Sbjct: 80 ITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPE 139
Query: 62 NAEIGSL 68
+ IG
Sbjct: 140 DKSIGDF 146
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E I + L QD+ QP + + + L D+NDNAP+F S I
Sbjct: 290 EVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIP 349
Query: 61 ENAEIG 66
EN +G
Sbjct: 350 ENYAVG 355
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA LDREK+ Y D P + S + + + D+NDN P F A + E
Sbjct: 598 IKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVRE 657
Query: 62 NAEIGS----LSTVNATIGVN 78
+ G +S +A IG N
Sbjct: 658 DIRPGGRVIEVSASDADIGKN 678
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF+ + ++
Sbjct: 3078 ELRTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSVDPYAVTVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRAQATDADTGLNR 3158
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++T V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTFTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETADKYTLNVTVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTAKELDRNNQVEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like [Bombus
terrestris]
Length = 3163
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A YTL A DR P+ V +T+ + D+ND+ P F + I E
Sbjct: 967 IRTAKPLDRESVAMYTLKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAE 1026
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1027 NSPIGS 1032
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE + Y L +D P + +++TD+NDNAP F + SI E
Sbjct: 863 ITTTRTLDRELVPGYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFEAPQYQGSIPE 922
Query: 62 NAEIG-SLSTVNAT 74
+ G S+ V+AT
Sbjct: 923 DVAGGTSVLRVSAT 936
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY D + + + LT+TD+NDN P F A + E
Sbjct: 653 IYTTKQLDREQCSRYQFTVIAADSGEVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVTSVTAT 726
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN IG
Sbjct: 601 ENVPIG 606
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L DR P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IGVN
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGVN 2804
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P + I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDMGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 701 NEPGGSYITTVSATDPDLGLN 721
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ P+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN P F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELTEIGSKVTQVSAT 2897
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR S I++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYSLTVQATDRGSTPRTDTSTISIVLLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + I++ L D+NDN P F S
Sbjct: 2000 LKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS 2053
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L S++ +T+ D+NDN+P F + S +++
Sbjct: 847 QLTTASVIDREEQSFYQLKVVASGG---TVTGDSMVNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ + S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVE 594
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 595 NAPTGTELLVLGATDG 610
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L DR P+ + + + D NDNAP F+ + SA +
Sbjct: 2707 EIRSIRPLDREKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2765
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IGVN
Sbjct: 2766 ENSPLGYTVTRVTTSDEDIGVN 2787
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P + I ++L DINDN+P F V A I E
Sbjct: 623 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQE 682
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 683 NEPGGSYITTVSATDPDLGLN 703
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ P+ + + + + DINDN P FA + I
Sbjct: 2086 EVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEIN 2145
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2146 ENTLTGT 2152
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2296 ELRVTQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIP 2355
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2356 EDAPTGT 2362
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K A LDRE+I Y L V D + + + DIND+ P FA + ++ E
Sbjct: 420 IKVASALDRERIPSYNLTVSVSD-----------LVIFVNDINDHPPVFAQQVYRVNLSE 468
Query: 62 NAEIGS-LSTVNATIG 76
A GS +S V+AT G
Sbjct: 469 EAPPGSYVSGVSATDG 484
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2809 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2865
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2866 ELTEIGSKVTQVSAT 2880
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN P F + IL
Sbjct: 2603 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFVSEIL 2662
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2663 ENLSPRKILTVSA 2675
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1356 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIP 1415
Query: 65 IGS 67
IG+
Sbjct: 1416 IGT 1418
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR S +++ L DIND P F S ++ E
Sbjct: 2192 ITVAKPLDREKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2251
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2252 N--LGTL 2256
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + I++ L D+NDN P F S
Sbjct: 1981 LKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS 2034
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L S++ +T+ D+NDN+P F + S +++
Sbjct: 829 QLTTASVIDREEQSFYQLKVVASGG---TVTGDSMVNITVKDLNDNSPHFLQAVESVNVV 885
Query: 61 ENAEIG 66
EN + G
Sbjct: 886 ENWQAG 891
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1776 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1832
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1833 EDTTPGSL 1840
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ + S++E
Sbjct: 519 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVE 576
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 577 NAPTGTELLVLGATDG 592
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 727 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 786
Query: 62 NAEIG 66
N +G
Sbjct: 787 NVALG 791
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1922 SARPLDREQNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1981
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ +S V+A +GVN
Sbjct: 1982 APLGTSVVQISAVDADLGVN 2001
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN+PEF + A+++E A+ G+
Sbjct: 462 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNSPEFEQDLYHANVMEVADPGT 521
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 884 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 942
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 943 SAELGA 948
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 297 ENATVGT 303
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1111 LDREARDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1170
Query: 68 LSTV 71
+ V
Sbjct: 1171 VVGV 1174
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1207 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1257
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L DR P+ + + + D NDNAP F+ + SA +
Sbjct: 2711 EIRSIRPLDREKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2769
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IGVN
Sbjct: 2770 ENSPLGYTVTRVTTSDEDIGVN 2791
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P + I ++L DINDN+P F V A I E
Sbjct: 628 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQE 687
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 688 NEPGGSYITTVSATDPDLGLN 708
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ P+ + + + + DINDN P FA + I
Sbjct: 2092 EVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEIN 2151
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2152 ENTLTGT 2158
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2302 ELQVTQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIP 2361
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2362 EDAPTGT 2368
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2813 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRPSYYLDCP 2869
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2870 ELTEIGSKVTQVSAT 2884
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN P F + IL
Sbjct: 2607 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKEDPFISEIL 2666
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2667 ENLSPRKILTVSA 2679
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR S +++ L DIND P F S ++ E
Sbjct: 2198 ITVAKPLDREKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2257
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2258 N--LGTL 2262
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1362 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIP 1421
Query: 65 IGS 67
IG+
Sbjct: 1422 IGT 1424
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3455 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3512
Query: 68 L 68
L
Sbjct: 3513 L 3513
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + I++ L D+NDN P F S
Sbjct: 1987 LKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS 2040
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L S++ +T+ D+NDN+P F + S +++
Sbjct: 834 QLTTASVIDREEQSFYQLKVVASGG---TVTGDSMVNITVKDLNDNSPHFLQAVESVNVV 890
Query: 61 ENAEIG 66
EN + G
Sbjct: 891 ENWQAG 896
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1782 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1838
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1839 EDTTPGSL 1846
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ + S++E
Sbjct: 524 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVE 581
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 582 NAPTGTELLVLGATDG 597
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECV-------SLITLTLTDINDNAPEFASV 53
+K A LDRE+I Y L V D P V SL IND+ P FA
Sbjct: 406 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSGASLGIFVNDIINDHPPVFAQQ 465
Query: 54 INSASILENAEIGS-LSTVNATIG 76
+ ++ E A GS +S V+AT G
Sbjct: 466 VYRVNLSEEAPPGSYVSGVSATDG 489
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 732 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 791
Query: 62 NAEIG 66
N +G
Sbjct: 792 NVALG 796
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE A Y+L D +P+ V+ ITLT+ D+NDN+P+F+ + ++ E
Sbjct: 1155 VTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTE 1214
Query: 62 NAEIGS 67
N GS
Sbjct: 1215 NTANGS 1220
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE +A Y L +D P W + + +T+ D NDN+P FAS S I E IGS
Sbjct: 1266 VDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGS 1325
Query: 68 -LSTVNAT 74
++ V AT
Sbjct: 1326 RVAVVTAT 1333
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE ++ Y + V D P ++ +T+ + D NDN+P+F S S+SILE
Sbjct: 1569 ISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILE 1628
Query: 62 NAEIGSLS 69
N+ S S
Sbjct: 1629 NSAPSSFS 1636
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I YTL D P + I +++ D+NDNAP F + S I E+A + S
Sbjct: 852 LDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHS 911
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T DRE A Y + QD P+ + + + + D+NDN P F+S +AS+ E
Sbjct: 223 IRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDE 282
Query: 62 NAEIG-SLSTVNAT 74
+ IG ++ TV A+
Sbjct: 283 DVAIGAAMVTVTAS 296
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ +R LD E+ + Y L V DR P S + + + DINDN P F+ + + E
Sbjct: 328 VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE 387
Query: 62 NAEIGS 67
N G+
Sbjct: 388 NTPAGT 393
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ D E RY L +DR P + +T+ + D+ND++P F+ S I E
Sbjct: 430 ISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPE 489
Query: 62 NAEIGS-LSTVNAT 74
+ IGS + TV AT
Sbjct: 490 STVIGSTVVTVTAT 503
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LD EK +Y + +D P+ ++++ + + D+NDN P+FA + + ++ E
Sbjct: 639 LKTQ--LDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGE 696
Query: 62 NAEIG 66
N G
Sbjct: 697 NLAAG 701
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + ++RE + YTL DR P +T+ + D+NDN P F S S+ E
Sbjct: 1364 LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRE 1423
Query: 62 N-AEIGSLSTVNA 73
N A+ S+ TV A
Sbjct: 1424 NSAQSTSVLTVAA 1436
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T LD E YT+ D + V LIT+ D+NDNAP FA + +
Sbjct: 123 EIRTVTPLDHETKDSYTMRISAFDGKHTTF--VPLITVD--DVNDNAPFFALSVYKTGVY 178
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNL 94
E+ +GS L+ V+ +G+N R ++ D + +
Sbjct: 179 EDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTV 217
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E A Y L +D P+ + + +T+ ++NDN P F S SI E+ I
Sbjct: 955 LDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAI 1012
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ T LDRE+ A YTL V D+ P+ V+ + + + D +DN P F
Sbjct: 1775 DISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF 1824
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA--SILE 61
T R DRE +RY L QD + +++ + + D NDNAPEF +NS +I E
Sbjct: 24 TGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFP--LNSYVFNIRE 81
Query: 62 NAEIGSLSTVNAT 74
N ++ V AT
Sbjct: 82 NTPAAQVAIVTAT 94
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE A YTL + + T+ + D+NDNAP F + S+ E
Sbjct: 1051 ISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHE 1110
Query: 62 NAEIG-SLSTVNAT 74
N IG +++ V AT
Sbjct: 1111 NLPIGQTVAKVTAT 1124
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ + LDRE Y+L +D + + +T+ L DINDN+P F
Sbjct: 535 IRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF 583
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
E+ T LDRE IA Y+L + D + + + +++ D NDN P F
Sbjct: 741 EITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTF 790
>gi|147899007|ref|NP_001086234.1| protocadherin 8 precursor [Xenopus laevis]
gi|49257671|gb|AAH74360.1| MGC84237 protein [Xenopus laevis]
Length = 997
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREKIA Y L +D P ++ V T+ ++D NDNAP FA + S+LEN
Sbjct: 405 TTSALDREKIAEYNLTVVAEDLGSPPFKTVKQYTIRVSDENDNAPVFAKPVYEVSVLENN 464
Query: 64 EIGSLST 70
G+ T
Sbjct: 465 APGAYIT 471
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + YTL D P+ +++ + + D NDN+P F ++
Sbjct: 183 DLVLMKELDRESQSAYTLELLAMDGGSPSRSGTTMVNVRVLDFNDNSPVFERSSVMVELM 242
Query: 61 ENAEIG 66
E+A +G
Sbjct: 243 EDAPVG 248
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y N V+ D C + I LTL D+NDNAPEF + + ++
Sbjct: 3080 ELRTLALLDREEQAVY--NLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVF 3137
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3138 ENTEPGTPLTRVQATDADTGLNR 3160
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3393 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3452
Query: 61 ENAEIG 66
EN +G
Sbjct: 3453 ENKPVG 3458
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE + +YTLN V D P L+ +T+ D NDNAPEF + E
Sbjct: 775 LKVLSPLDREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 835 DKEVNS 840
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1516 LYTAEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYE 1575
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1576 SAAVGSV 1582
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S SA I E
Sbjct: 1621 IKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNASPKFTSKEYSAEISE 1680
Query: 62 NAEIGSL 68
IGS
Sbjct: 1681 AIRIGSF 1687
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAAL 3352
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2871 ITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVS 2930
Query: 61 ENAEIGS----LSTVNA-TIGVNR 79
E+ G LST +A T +NR
Sbjct: 2931 EDDPPGGVIAILSTTDADTEEINR 2954
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P + +++ DINDN P F AS+
Sbjct: 3183 IQLEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVS 3242
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3243 EDIVIGT 3249
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE A ++ + +D + + LTD NDNAP+F S +I
Sbjct: 2549 QIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIG 2608
Query: 61 ENAEIGS 67
+A G+
Sbjct: 2609 SSAAKGT 2615
>gi|334311089|ref|XP_001377821.2| PREDICTED: protocadherin gamma-A4-like, partial [Monodelphis
domestica]
Length = 835
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+++ Y + DR P + I+L + DINDN P F + SA I+E
Sbjct: 404 LVTNKALDREQVSMYNITVRATDRGNPPLSTDTHISLHIEDINDNPPAFIQTVYSAYIME 463
Query: 62 N----AEIGSLSTVNATIGVNRCGH 82
N I SL+ ++ IG N GH
Sbjct: 464 NNPRGTSIYSLTAHDSDIGEN--GH 486
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I +T+ D NDN P F + + S+
Sbjct: 193 ELVLERALDREEEPVHHLTLIASDGGDPVRSGTVHICVTVLDANDNTPVFTQSLYTVSVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L TVNAT G+N + + FR + +F+
Sbjct: 253 ENVPVGTWLLTVNATDPDEGINGKINYFFRKITKKTSRIFR 293
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + Y ++ ++ RD P + I +T+ D+NDNAP+ ++SI EN+ GS
Sbjct: 307 LDYEESSFYDID--IEARDGPGLLDRAKILITVLDVNDNAPDVTITSVTSSISENSSAGS 364
Query: 68 L 68
+
Sbjct: 365 V 365
>gi|334311085|ref|XP_001377757.2| PREDICTED: protocadherin gamma-A4-like [Monodelphis domestica]
Length = 822
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+++ Y + DR P + I+L + DINDN P F + SA I+E
Sbjct: 404 LVTNKALDREQVSMYNITVRATDRGNPPLSTDTHISLHIEDINDNPPAFIQTVYSAYIME 463
Query: 62 N----AEIGSLSTVNATIGVNRCGH 82
N I SL+ ++ IG N GH
Sbjct: 464 NNPRGTSIYSLTAHDSDIGEN--GH 486
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+++ + L D P+ + LI +T+ D NDNAP F S S+
Sbjct: 193 EMVLEQALDREEVSIHHLTLTASDGGNPSRSAIVLILVTVLDANDNAPVFTQFQYSVSVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L VNAT
Sbjct: 253 ENVPVGTCLLRVNAT 267
>gi|340728577|ref|XP_003402597.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus terrestris]
Length = 931
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T + LD E+ +TL +DR +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 827 IRTTQSLDFEERQVHTLTIVAKDRGEPSLSSETMVIIEVVDVNENLHAPVFDDFVVSASV 886
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN IG+L T + G +R G+T RG D
Sbjct: 887 FENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGD 921
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE+ + Y LN V D +P ++ +T+ D+NDNAP+F + S I E A
Sbjct: 619 LDRERESEYFLNISVYDLGKPQKSASKMLPVTILDVNDNAPKFEKSLASFRISETA 674
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 8 LDREKIARYTLNAHVQDR-----DQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE+ Y L QD D P +L+ +T+ D+NDNAP FA + I E+
Sbjct: 722 LDRERQEIYELRIRAQDNGGKGTDSPPLYSDALVRVTVDDVNDNAPSFALSTYTVKIRED 781
Query: 63 AEIGS-LSTVNAT 74
I + ++ V+AT
Sbjct: 782 VPIWTVVAVVDAT 794
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 8 LDRE-KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE + Y L DR P + + L D+NDNAP F+ I + E A I
Sbjct: 142 LDRETAVQGYNLTLRATDRGVPQRYSYKFVPVHLADLNDNAPVFSREIYEVKVPETAPI 200
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE A Y+L D +P+ V+ ITLT+ D+NDN+P+F+ + ++ E
Sbjct: 1763 VTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTE 1822
Query: 62 NAEIGS 67
N GS
Sbjct: 1823 NTANGS 1828
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE +A Y L +D P W + + +T+ D NDN+P FAS S I E IGS
Sbjct: 1874 VDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGS 1933
Query: 68 -LSTVNAT 74
++ V AT
Sbjct: 1934 RVAVVTAT 1941
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE ++ Y + V D P ++ +T+ + D NDN+P+F S S+SILE
Sbjct: 2177 ISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILE 2236
Query: 62 NAEIGSLS 69
N+ S S
Sbjct: 2237 NSAPSSFS 2244
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I YTL D P + I +++ D+NDNAP F + S I E+A + S
Sbjct: 1460 LDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHS 1519
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T DRE A Y + QD P+ + + + + D+NDN P F+S +AS+ E
Sbjct: 828 IRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDE 887
Query: 62 NAEIG-SLSTVNAT 74
+ IG ++ TV A+
Sbjct: 888 DVAIGAAMVTVTAS 901
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ +R LD E+ + Y L V DR P S + + + DINDN P F+ + + E
Sbjct: 933 VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE 992
Query: 62 NAEIGS 67
N G+
Sbjct: 993 NTPAGT 998
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ D E RY L +DR P + +T+ + D+ND++P F+ S I E
Sbjct: 1038 ISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPE 1097
Query: 62 NAEIGS-LSTVNAT 74
+ IGS + TV AT
Sbjct: 1098 STVIGSTVVTVTAT 1111
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LD EK +Y + +D P+ ++++ + + D+NDN P+FA + + ++ E
Sbjct: 1247 LKTQ--LDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGE 1304
Query: 62 NAEIG 66
N G
Sbjct: 1305 NLAAG 1309
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + ++RE + YTL DR P +T+ + D+NDN P F S S+ E
Sbjct: 1972 LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRE 2031
Query: 62 N-AEIGSLSTVNA 73
N A+ S+ TV A
Sbjct: 2032 NSAQSTSVLTVAA 2044
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSASILENA 63
R LDRE+++ YTL D+ P A E V + + + D NDNAP F S N ++ ENA
Sbjct: 2283 RKLDREQVSIYTLYVQAVDQGNPRLASEWVP-VHIRVQDENDNAPRFVSSGN-CNVSENA 2340
Query: 64 EIGSL 68
+G++
Sbjct: 2341 VVGAI 2345
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A Y L +D P+ + + +T+ ++NDN P F S SI E+ I +
Sbjct: 1563 LDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINT 1622
Query: 68 -LSTVNAT 74
+ +NAT
Sbjct: 1623 HVVKLNAT 1630
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D + A ++ + +T+ D+NDNAP FA + + E+ +GS
Sbjct: 734 LDREAKSAYDLVVEASDGNIIA---IAALKITVDDVNDNAPFFALSVYKTGVYEDVAVGS 790
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLRCYNL 94
L+ V+ +G+N R ++ D + +
Sbjct: 791 IVRQLTAVDLDVGINARLSYSLVSGDTSYFTV 822
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R DRE +RY L QD + +++ + + D NDNAPEF +I EN
Sbjct: 525 TGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENT 584
Query: 64 EIGSLSTVNAT 74
++ V AT
Sbjct: 585 PAAQVAIVTAT 595
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ A YTL V D+ P+ V+ + + + D +DN P F + +I
Sbjct: 2486 DISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTIS 2545
Query: 61 ENAEIGS 67
E+ G+
Sbjct: 2546 ESLPRGA 2552
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE A YTL + + T+ + D+NDNAP F + S+ E
Sbjct: 1659 ISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHE 1718
Query: 62 NAEIG-SLSTVNAT 74
N IG +++ V AT
Sbjct: 1719 NLPIGQTVAKVTAT 1732
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
++ + LDRE Y+L +D + + +T+ L DINDN+P F
Sbjct: 1143 IRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF 1191
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF--ASVIN-SA 57
E+ T LDRE IA Y+L + D + + + +++ D NDN P F S N S
Sbjct: 1349 EITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRFNISE 1408
Query: 58 SILENAEIGSLSTVNATIGVN 78
+G L+ + IG N
Sbjct: 1409 DSPTGTRVGQLTATDRDIGPN 1429
>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
Length = 3255
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ R LDREK ++YTL+ D+ PA + + + + D NDNAP F+ + SA +
Sbjct: 1004 EIRNTRQLDREKASQYTLSVKASDKGSPARSSIVKVIIYVLDDNDNAPRFSQIF-SAFVA 1062
Query: 61 ENAEIGSLST 70
ENA +G T
Sbjct: 1063 ENAVLGCFVT 1072
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L AR LDRE+ + YTL DR + +++ L+DIND P+F + S+ E
Sbjct: 492 LSIARPLDRERKSSYTLKIQASDRGSSPRSDTATVSILLSDINDVVPKFELSPYTVSVPE 551
Query: 62 NAE 64
N E
Sbjct: 552 NLE 554
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS----VINS 56
E++ LDRE I+ YTL +D+ +P+ + + + DINDN+P F+ V S
Sbjct: 386 EVRLTGELDREDISNYTLTIIAKDKGEPSLSSSMDMNIIVLDINDNSPHFSQRHFKVEIS 445
Query: 57 ASILENAEIGSLSTVNATIGVN 78
S L ++ L +A G+N
Sbjct: 446 ESTLTGTDLIQLIASDADEGIN 467
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LD E + +Y L +D P + + +T+ D+NDN P+F A I+
Sbjct: 900 QLYIKNPLDFETMPKYELWVEARDMGFPPFSSYEKLEITVLDVNDNQPQFKQDPFIAEII 959
Query: 61 ENAEIGSLSTVNA 73
EN + T++A
Sbjct: 960 ENLSPRKILTISA 972
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ +R L+RE RY + D W + +T+ +TD+NDNAP F+ E
Sbjct: 1107 ITVSRPLNREDNDRYIVRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSKPSYYLDYPE 1163
Query: 62 NAEIGS 67
+IGS
Sbjct: 1164 TLDIGS 1169
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE Y+L D PA I++ + DINDN P FA + +I
Sbjct: 596 QLSLIKSLDREVKEWYSLLITATDAGFPALTGTGTISIQVEDINDNKPTFALNHHFITIP 655
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 656 EDAPTGT 662
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 13 IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
I R++ DR P + +++ + D NDNAP+F+S + +NA+IG+
Sbjct: 1226 INRHSFIVSASDRGSPPIMSETTVSINIVDSNDNAPKFSSTKYFTPVSKNAKIGT 1280
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S +
Sbjct: 76 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITISDVNDHIPKFSRAVYSFDVA 132
Query: 61 ENAEIGSL 68
E+ GS+
Sbjct: 133 EDTIPGSI 140
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+I + L+ +D P + +T+TD NDN E +V
Sbjct: 1846 LTTTREIDREQINEFFLSVVTRDSGFPQMSSTGTVHITVTDQNDNPSEPRAV 1897
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 16 YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
Y + +D+ P +L+ +T+T+ N + PEF+ S ++LE+ +G++
Sbjct: 1335 YMIKVFAKDKGNPPLSSQALVNITVTEENYHTPEFSQSHVSVTVLESLSVGTV 1387
>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
Length = 4539
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ R LDRE YTLN V D QPA +L+ + + D+NDNAP+F +I + +I E
Sbjct: 748 LQLQRALDRELRDSYTLNITVWDMGQPAKASYTLLDVRVIDVNDNAPQFQKMIYNVTIPE 807
Query: 62 NAEI 65
N ++
Sbjct: 808 NIDV 811
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++ LDRE + L + PA +++T+ + DINDN P F S + +I+
Sbjct: 2742 KIEVYDALDREVVDSVRLTIRAETETSPALVAETVVTVKIMDINDNPPVFESQHYAVTIM 2801
Query: 61 ENAEIGS----LSTVNATIGVNR-CGHTFRGKDLRCYNLF 95
ENAEIGS + +A G N +++ +D + N+F
Sbjct: 2802 ENAEIGSQVLRVEAHDADTGANSDLSYSYLIEDAQISNIF 2841
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE Y + DR P V+L+ +++TD NDN P+F ++
Sbjct: 2849 QISTLVSLDREARDTYEFSVTASDRGSPPLSSVTLVKISVTDFNDNPPQFEQDEYEGAVN 2908
Query: 61 ENAEIGSL 68
E+A G++
Sbjct: 2909 EDALPGTI 2916
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE +A+Y ++ + D+ + + + + D NDN PEF + SI E+A +G
Sbjct: 3164 LDREAVAQYNISVYAYDQGTVRLSSAAHLIVNVLDENDNPPEFERSVYLESIPEDAAVGS 3223
Query: 67 SLSTVNAT 74
SL V AT
Sbjct: 3224 SLLQVTAT 3231
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVI 54
T+R LDRE+ A + L + D P+ + + + +TD+ND AP+F +
Sbjct: 1177 TSRRLDREQQAEHILEVRISDNGVPSLSSTTRVVVKVTDVNDLAPQFTESV 1227
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LD E + Y+L D +P + + + +TD ND AP F + +I E
Sbjct: 3266 LRHQKPLDYETVREYSLTVLATDGGEPPLTASATLNINVTDCNDQAPIFDQSVYRLTIPE 3325
Query: 62 NAEIG-SLSTVNAT 74
N +G S+ V+AT
Sbjct: 3326 NTRVGQSILKVSAT 3339
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+K + LDRE I Y L D ++P V L++++L DINDN P+F S I
Sbjct: 851 IKVNQQLDRETIPWYELQVVASDGALEKPLSSTV-LVSISLADINDNPPQFFPESYSIRI 909
Query: 60 LENAEIG 66
E+ +G
Sbjct: 910 REDLPVG 916
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE + + L V+D+ P+ ++ + + + D ND+ PEF + +
Sbjct: 1488 ITTRERLDREAASHHQLVVMVRDQGTPSKRSLARVVIVVNDHNDHHPEFVTSEVEGRVYG 1547
Query: 62 NAEIGS 67
+AEIG+
Sbjct: 1548 SAEIGT 1553
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
LKT LD E A Y + VQD P+ ++ +T+ + DIND+ P+F+ S +
Sbjct: 1803 LKTKVTLDHEVAAVYEFSVQVQDSGVPSQSAMTAAQVTVHVMDINDSPPQFSEPEYSVRL 1862
Query: 60 L 60
L
Sbjct: 1863 L 1863
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTL V D C S + + +TD+NDNAP F + I E+A+ +
Sbjct: 3063 LDRETAPDYTLT--VTAVDGGGLFCQSEVYIVVTDVNDNAPVFTQTEYTVGISEHAQKNT 3120
Query: 68 L 68
L
Sbjct: 3121 L 3121
>gi|157649917|gb|ABV59342.1| protocadherin mu3 [Callorhinchus milii]
Length = 951
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE Y +N +D PA ++ + +TDINDNAP+F S +A ++E
Sbjct: 406 LKTKAALDRETAPEYKINITCRDDGSPALSSHKIMVVKITDINDNAPKFESRSYTAYVME 465
Query: 62 NAEIGS 67
N+ GS
Sbjct: 466 NSAPGS 471
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + + D P + IT+ + D NDN+P F + S+
Sbjct: 192 ELVLEKSLDREQESLHNILLTAIDGGTPERSGTAYITVVVLDANDNSPVFQQSLYKVSVR 251
Query: 61 ENAEIGSLS-TVNAT 74
ENA +G+L +NAT
Sbjct: 252 ENAAVGTLVIALNAT 266
>gi|348546065|ref|XP_003460499.1| PREDICTED: protocadherin alpha-8-like, partial [Oreochromis
niloticus]
Length = 604
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ Y + D P S++T+ ++D+NDNAP F +N+ + EN+ +G+
Sbjct: 410 LDRELISHYNITIKATDEGSPPLSSTSVVTIQVSDVNDNAPLFGDTVNNIYVAENSPVGT 469
Query: 68 -LSTVNAT 74
L TV AT
Sbjct: 470 VLKTVCAT 477
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDREK A L D P S I + + DINDN P F + SI
Sbjct: 190 EIVLQRSLDREKQAVIKLTLTAIDGGTPIKSGTSEIIINVLDINDNIPTFKKSLYKTSIK 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA G ++ TV+AT
Sbjct: 250 ENAPSGTTVVTVSAT 264
>gi|334311087|ref|XP_001377790.2| PREDICTED: protocadherin gamma-A4-like [Monodelphis domestica]
Length = 821
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+++ Y + DR P + I+L + DINDN P F + SA I+E
Sbjct: 405 LVTNKALDREQVSMYNITVRATDRGNPPLSTDTHISLHIEDINDNPPAFIQTVYSAYIME 464
Query: 62 N----AEIGSLSTVNATIGVNRCGH 82
N I SL+ ++ IG N GH
Sbjct: 465 NNPRGTSIYSLTAHDSDIGEN--GH 487
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L DR P + +T+ D NDNAPEF + S ++L
Sbjct: 194 ELVLDRALDREEEPVHHLILSASDRGDPILSGTLRVLVTVMDANDNAPEFTQSVYSVNVL 253
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ L TV+AT
Sbjct: 254 ENLPQGTQLLTVSAT 268
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ Y ++ ++ RD ++ + +T+ D+NDN P+ ++SI EN+ +GS
Sbjct: 308 LDYEECNFYDID--IEARDGAGLLAIAKVLVTILDVNDNTPDVTITSVTSSISENSSVGS 365
Query: 68 L 68
+
Sbjct: 366 M 366
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2694 EIRSIRSLDREKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAYVP 2752
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IGVN
Sbjct: 2753 ENSPLGYTVTRVTTSDEDIGVN 2774
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L D+NDN+P F V A I E
Sbjct: 641 LSTVTSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 701 NEPGGSYITTVSATDPDLGLN 721
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QPA + + + + DINDN P F + I
Sbjct: 2073 EVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQALYKVEIN 2132
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2133 ENTLTGT 2139
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + D+NDN P FAS + +I
Sbjct: 2283 ELQVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKMYFTTIP 2342
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2343 EDAPTGT 2349
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + LT+ D+NDN+P F + IL
Sbjct: 2590 QVSISQPLDFEKIQKYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFKEDPFVSEIL 2649
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2650 ENLSPRKILTVSA 2662
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2796 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2852
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2853 ELTEIGSKVTQVSAT 2867
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR S +++ L DIND P F S ++ E
Sbjct: 2179 ITVAKPLDREKTPTYSLTVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPYSVNVPE 2238
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2239 N--LGTL 2243
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3438 LDRETLPVYNLTVLAIDSGTPSATGSASLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3495
Query: 68 L 68
L
Sbjct: 3496 L 3496
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1763 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1819
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1820 EDTTPGSL 1827
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILEN 62
A GLDRE ++ LN +D+ P + L+ +TL D+ND P F+ S++EN
Sbjct: 537 AGGLDRELASQIVLNISARDQGVHPKFSYAQLV-VTLLDVNDEKPVFSQPEGYDVSVVEN 595
Query: 63 AEIGS 67
A G+
Sbjct: 596 APTGT 600
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F + S +++
Sbjct: 847 QLTTASVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
>gi|444713192|gb|ELW54100.1| Protocadherin gamma-A3 [Tupaia chinensis]
Length = 1889
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y ++ DR P + ITL + DINDN P F+ SA I E
Sbjct: 382 LVTARSLDREEMSEYNISLRATDRGSPPLSTETHITLQVADINDNPPSFSHSSYSAYIPE 441
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + T +G L Y
Sbjct: 442 NNPRGASIFSVKAQDPDSDDNARITYSLTEDTLQGAPLSSY 482
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R L+RE+ A Y + DR +P + ITL + D+NDNAP F + EN
Sbjct: 1135 RRLNREETAEYNVTITAIDRGKPPLSSRTSITLHIADVNDNAPIFHQASYIVHVAENNSP 1194
Query: 66 G-SLSTVNAT 74
G S++ V+A+
Sbjct: 1195 GISIAQVSAS 1204
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P + I +TL D NDNAP F S+
Sbjct: 1563 ELVLEQALDREEEAAHHLVLTAFDGGHPVLSGTARIHITLVDTNDNAPVFTRPEYHVSVQ 1622
Query: 61 ENAEIGS 67
EN +G+
Sbjct: 1623 ENVPVGT 1629
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I + + D NDN P F S S+L
Sbjct: 171 ELVLERALDREEKEVHQLVLVATDGGDPVRSGNLGIRVIVLDANDNPPVFTQPEYSVSVL 230
Query: 61 ENAEIGS-LSTVNAT 74
E+ +G+ L TVNAT
Sbjct: 231 ESVPVGTRLLTVNAT 245
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + L D P + I + +TD NDNAP F+ I S+
Sbjct: 920 ELLLEKPLDREHQTSHRLILTAVDGGDPPLSGTTQIQIQVTDANDNAPVFSQDIYRVSLR 979
Query: 61 ENAEIGSLS 69
EN G+ +
Sbjct: 980 ENVPQGTFA 988
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E Y + QD P ++ I +T+ D+NDNAPE + S+LE A
Sbjct: 283 KSLDYEDAMFYEIKIEAQD--GPGLFSIAKILVTVLDVNDNAPEITITSLTGSVLEEATA 340
Query: 66 G 66
G
Sbjct: 341 G 341
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ +RY L +D C + + + D NDNAPE + ++ I E++E+G+
Sbjct: 1034 LDFEETSRYMLGVEARDGGVHTAHCN--VQIEIVDENDNAPEVTFMSSTNQIPEDSELGT 1091
Query: 68 L 68
+
Sbjct: 1092 I 1092
>gi|348546069|ref|XP_003460501.1| PREDICTED: protocadherin alpha-8-like, partial [Oreochromis
niloticus]
Length = 569
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ Y + D P S++T+ ++D+NDNAP F +N+ + EN+ +G+
Sbjct: 410 LDRELISHYNITIKATDEGSPPLSSTSVVTIQVSDVNDNAPLFGDTVNNIYVAENSPVGT 469
Query: 68 -LSTVNAT 74
L TV AT
Sbjct: 470 VLKTVCAT 477
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDREK A L D P S I + + DINDN P F + SI
Sbjct: 190 EIVLQRSLDREKQAVIKLTLTAIDGGTPIKSGTSEIIINVLDINDNIPTFKKSLYKTSIK 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA G ++ TV+AT
Sbjct: 250 ENAPSGTTVVTVSAT 264
>gi|326673335|ref|XP_003199845.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 807
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 194 DLILKKPLDREEQASHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 253
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 254 ENAPIGSLVVKLNAT 268
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex echinatior]
Length = 3164
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A YTL A DR PA + +T+ + DIND+ P F + I E
Sbjct: 968 IRTAKILDRESVAYYTLKAVATDRGSPALSSIVPVTIKIEDINDSPPAFENDKIILYITE 1027
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1028 NSPIGS 1033
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + Y L +D P+ + + +++TD+NDNAP F + SILE
Sbjct: 864 ITTTKALDRESVPSYLLTVTARDGGVPSLSDTTDVEISVTDVNDNAPVFEAPQYHGSILE 923
Query: 62 N 62
+
Sbjct: 924 D 924
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ ++Y D + + + LT+TD+NDN P F A + E
Sbjct: 653 IYTTKQLDREQCSKYQFTVIAADSGEEPKSASATVFLTVTDVNDNDPYFEPKTYEAVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
++ G+ ++TV AT
Sbjct: 713 DSLAGTPVTTVTAT 726
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVTLVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
E+ +G
Sbjct: 601 ESVPVG 606
>gi|326673343|ref|XP_003199849.1| PREDICTED: protocadherin alpha-C2-like [Danio rerio]
Length = 802
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 402 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 461
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 462 ENNAPGASLSSITA 475
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 189 DLILKKSLDREEQAIHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 248
Query: 61 ENAEIGSL 68
ENA IGSL
Sbjct: 249 ENAPIGSL 256
>gi|326673289|ref|XP_003199822.1| PREDICTED: protocadherin alpha-C2-like [Danio rerio]
Length = 802
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 402 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 461
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 462 ENNAPGASLSSITA 475
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 189 DLILKKSLDREERAIHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 248
Query: 61 ENAEIGSL 68
ENA IGSL
Sbjct: 249 ENAPIGSL 256
>gi|322799335|gb|EFZ20723.1| hypothetical protein SINV_13005 [Solenopsis invicta]
Length = 477
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A Y L A DR PA V +T+ + DIND+ P F + I E
Sbjct: 20 IRTAKPLDRESVAHYILRAAAIDRGSPALSSVVPVTVKIEDINDSPPAFENDKIVLYIAE 79
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 80 NSPIGS 85
>gi|326673337|ref|XP_003199846.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 801
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 408 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 467
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 468 ENNAPGASLSSITA 481
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D NDNAP+F + ++
Sbjct: 195 DLILKKALDRETQAVHNLILTAVDGGVPPRSGTASIMVRVLDANDNAPKFDKDSYTINLT 254
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 255 ENAPIGSLVVKLNAT 269
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3076 ELKTLAPLDREEQAVYHLV--VKATDGGGRFCQANIVLTLDDVNDNAPEFSADPYTMTVF 3133
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN E G+L T V AT G+NR
Sbjct: 3134 ENTEPGTLLTRVQATDPDAGLNR 3156
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3389 EVKVTKLLDRETISGYTLTVQASDNGSPPRANTTTVNIDVSDVNDNAPVFSRENYSVIIQ 3448
Query: 61 ENAEIG 66
EN +G
Sbjct: 3449 ENKPVG 3454
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E + ++ L V+D+D P I + ++D ND+AP F S + E
Sbjct: 1512 LYTAEALDHEAVHQHVLTVMVRDQDVPVKRNFVRIVVNVSDTNDHAPWFTSSSYEGRVYE 1571
Query: 62 NAEIGSL 68
+A GS+
Sbjct: 1572 SAATGSV 1578
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 772 LKILSPLDRETTDKYTLNITVSDLGIPQKAAWHLLAVRVLDANDNPPEFFQESYFVEVSE 831
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 832 DKEVNS 837
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P S + +++ DINDN P F SAS+
Sbjct: 3179 IQLEKPLDRELQAVYTLTLKATDQGLPRRLTATSTVVVSVLDINDNPPVFEYREYSASVS 3238
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3239 EDTLIGT 3245
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E++ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2344 RTLDYEQVHQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEARISEHAMH 2403
Query: 66 GSLST 70
G T
Sbjct: 2404 GHFVT 2408
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A I E+A
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDPYTAVISEDA 3346
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P V+ + + + D NDN P+F
Sbjct: 1197 TSRRLDREQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQF 1243
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E + YTL VQ + S + + L D NDNAP F + I E+A
Sbjct: 1719 TQKALDFEALPVYTLT--VQGTNMAGLSTNSTVLVHLQDENDNAPVFTQAEYTGRISESA 1776
Query: 64 EIGSLSTVNATI 75
I S+ + +
Sbjct: 1777 SINSVVLTDKNV 1788
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1617 IKTAKELDRSNQVEYDLIVKATDKGSPPMSEITSVHVFVTIADNASPKFTSKEYSVEISE 1676
Query: 62 NAEIGSL 68
IGS
Sbjct: 1677 TIGIGSF 1683
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE A + + +D I + LTD NDNAP+F + +I
Sbjct: 2545 QIFTLEKLDREIPAEKVIAVRLMAKDAGGKVAFCTINVILTDDNDNAPQFRATKYEVNIG 2604
Query: 61 ENAEIGS 67
NA G+
Sbjct: 2605 SNAPKGT 2611
>gi|326673333|ref|XP_003199844.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 802
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D P+ + I + + D NDNAP+F + +
Sbjct: 194 DLVLKKALDREEQAVHNLILTAVDGGVPSRSGTANIIVQVLDTNDNAPQFDKDSYTVHLS 253
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 254 ENAPIGSLVVKLNAT 268
>gi|326673341|ref|XP_003199848.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 819
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 194 DLILKKPLDREEQASHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 253
Query: 61 ENAEIGSL 68
ENA IGSL
Sbjct: 254 ENAPIGSL 261
>gi|326673285|ref|XP_002664319.2| PREDICTED: protocadherin-10-like [Danio rerio]
gi|326673339|ref|XP_003199847.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 799
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 406 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 465
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 466 ENNAPGASLSSITA 479
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A Y L D PA + I + + D NDNAP+F + ++
Sbjct: 193 DLILKKPLDREERASYNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 252
Query: 61 ENAEIGSL 68
ENA IGSL
Sbjct: 253 ENAPIGSL 260
>gi|326673283|ref|XP_003199821.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 804
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 194 DLIMKKPLDREEQASHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 253
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 254 ENAPIGSLVVKLNAT 268
>gi|326673287|ref|XP_002664318.2| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 819
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D PA + I + + D NDNAP+F + ++
Sbjct: 194 DLILKKPLDREEQASHNLILTAVDGGVPARSGTASIIVRVLDTNDNAPQFDKDSYTINLT 253
Query: 61 ENAEIGSL 68
ENA IGSL
Sbjct: 254 ENAPIGSL 261
>gi|292620491|ref|XP_002664313.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 799
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 406 ELLVSEPLDREKLPEYDITITVTDRGNPPLSDNETITLELLDVNDNVPQFPQTFYTIPVM 465
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 466 ENNAPGASLSSITA 479
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D NDNAP+F + ++
Sbjct: 193 DLILKKALDRETQAVHNLILTAVDGGVPPRSGTASIMVRVLDANDNAPKFDKDSYTINLT 252
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 253 ENAPIGSLVVKLNAT 267
>gi|363738407|ref|XP_003642004.1| PREDICTED: B-cadherin [Gallus gallus]
Length = 910
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA- 63
A GLDRE++ YTL D D +L + +TD+NDNAPEF A++ EN
Sbjct: 360 ASGLDRERVREYTLTMQAADLDGQGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEA 419
Query: 64 --EIGSLSTVN 72
E+ L+T +
Sbjct: 420 ELEVARLATTD 430
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K + LDRE I +Y L +H V + +P E + +I +T+TD NDN P+F + S+
Sbjct: 244 MKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEII-VTVTDQNDNKPQFTQEVFRGSVP 302
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ VNAT
Sbjct: 303 EGALPGTSVMRVNAT 317
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y L V+ D C + I LTL D+NDNAPEF + S ++
Sbjct: 3075 ELKTLMALDREQQAVYHL--LVKATDGGGRFCQANIILTLEDVNDNAPEFTTDTYSITVF 3132
Query: 61 ENAEIGSLST-VNAT 74
EN E G+L T V AT
Sbjct: 3133 ENTEPGTLLTRVQAT 3147
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDREKI+ YTL D P + + + ++D+NDN P F+ S I
Sbjct: 3379 EIKVTKLLDREKISGYTLTVQASDNGSPPKLNTTTVNIDVSDVNDNPPVFSKGNYSVIIQ 3438
Query: 61 ENAEIG 66
EN +G
Sbjct: 3439 ENKPVG 3444
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++ L V+D+D P + + + ++D ND+AP F S + E
Sbjct: 1509 LYTSEKLDHETMNQHILTIMVRDQDVPVKRNYARVVVNVSDTNDHAPWFTSPAYEGRVYE 1568
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1569 SAAVGS 1574
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P +L+ + + D NDN PEF + E
Sbjct: 769 LKILSPLDRELRDKYTLNITVYDLGIPQKSAWTLLDIKILDANDNPPEFLQDSYFVEVSE 828
Query: 62 NAEIGS 67
N E S
Sbjct: 829 NKEPNS 834
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA+ LD E+I ++ L D +++T+ +TD+NDN P F+ ++ A I E A
Sbjct: 2341 TAKTLDYEQIKQHKLLIRAVDGGMLPLSSDTIVTVDVTDLNDNPPLFSQLLYEAKISELA 2400
Query: 64 EIGSLST 70
G T
Sbjct: 2401 PRGHFVT 2407
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +Y + DR ++ ++++ +T+TD+NDN P F + I ++
Sbjct: 2866 ITTLKELDHEKRDKYKIIVVASDRGEKIQLSSMAVVEVTVTDVNDNPPRFTAEIYKGTVS 2925
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2926 EDDPPGGVIAILSTTDA 2942
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D PA ++ + + + D NDN P+F
Sbjct: 1194 TSRKLDREQQGEHILEVTVTDNGTPAKSTIARVIVKVLDENDNKPQF 1240
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V + + +TDINDN+P F+ +A I E+A
Sbjct: 3281 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTYTAVISEDA 3336
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + D+ I + + D+NDNAP+ + ++E
Sbjct: 1086 IETADHLDRETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVME 1145
Query: 62 NA 63
N+
Sbjct: 1146 NS 1147
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNA-PEFASVINSASIL 60
+K A+ LDR Y L D+ P V+ + + +T ++DNA P+F + S I
Sbjct: 1614 IKIAKELDRSNQEEYNLMVKATDKGHPPMSEVTSVHIFVT-VSDNASPKFTAKEYSTEIS 1672
Query: 61 ENAEIGSL 68
E+A IGS
Sbjct: 1673 ESANIGSF 1680
>gi|432879481|ref|XP_004073492.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 828
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE ++Y + V D +PA +S++T+ L+D+NDNAP F S S + EN +
Sbjct: 410 LDREVTSKYNVTILVSDEGRPARSNISVVTVYLSDVNDNAPHFPSPFISIYVNENGKTGG 469
Query: 65 -IGSLSTVNATIGVN 78
IG +S ++A + N
Sbjct: 470 VIGKVSAIDADVDTN 484
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D P S I + + D NDNAP F+S + IL
Sbjct: 190 ELVLQKALDREKKANIELLLTAVDGGSPPKSGTSEININVLDSNDNAPIFSSSLYKIQIL 249
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKD 88
EN +GS L+ +A G N ++ R KD
Sbjct: 250 ENVAVGSKIFTLNVTDADDGTNSEIVYSLRSKD 282
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + + A +D+ QP S + + + D+NDN PE +++ E+A++G+
Sbjct: 305 IDYEERKAFEIRAEARDKGQPPMSAHSKVLVEVIDVNDNTPEITVTSLLSTLNEDADVGT 364
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE++ YTL QD P + + L + D+NDN P F + ++++ E
Sbjct: 803 LVTARPLDRERVGGYTLVVAAQDGGNPPLSDTTNVELEIADVNDNTPVFPTAGYTSTVSE 862
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++A +G+N
Sbjct: 863 DALVGTSVAHVSALDADLGLN 883
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE+ A + +D P+ + I L + D+NDN P F A++ E
Sbjct: 597 VSTTRQLDREESASFNFQVVARDHGTPSRSATASILLRVQDVNDNDPVFEPRTYEATVSE 656
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A Y L A DR P+ + + + D+ND+ P F++ + E
Sbjct: 909 VRTNRALDRETVAAYHLVAFAVDRGSPSLSASVSVVVYVEDVNDSPPRFSADRIRLFVPE 968
Query: 62 NAEIGSLS 69
N+ +GS++
Sbjct: 969 NSPVGSVA 976
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E Y L VQD P+ + + + + DINDN P+F + + ++ EN +G
Sbjct: 497 LDYESARSYRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVG 555
>gi|410915524|ref|XP_003971237.1| PREDICTED: protocadherin-10-like [Takifugu rubripes]
Length = 721
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE I RY + V D+ P I L + DINDNAP F+ + + ++
Sbjct: 389 ELIVSKPLDREVIGRYEITLMVTDKGSPPLAENETIALEILDINDNAPRFSQSVYTIHVV 448
Query: 61 ENAEIGSLST 70
EN + G+L T
Sbjct: 449 ENNQPGALLT 458
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECV--------------SLITLTLTDINDNAPEFAS 52
G D K LNAH+ +QP + + I + + DINDN P FA
Sbjct: 166 GSDGSKYVDLVLNAHLNREEQPIHRLILTAVDGGVPARSGTASIVINVLDINDNPPVFAQ 225
Query: 53 VINSASILENAEIGS-LSTVNAT 74
+ + ++ EN G+ + T+ AT
Sbjct: 226 PVFAVNVSENPAAGTVVMTLKAT 248
>gi|268557966|ref|XP_002636973.1| Hypothetical protein CBG09454 [Caenorhabditis briggsae]
Length = 2592
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ A L +DR P+ S ITLTL+D+NDNAP F + I E
Sbjct: 859 LRVSSKLDREQFAVILLPIFARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSYDLYIAE 918
Query: 62 NAEIGS 67
NA GS
Sbjct: 919 NAPAGS 924
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A LDRE A +++ D P + I + L DINDNAP+F S +A+I
Sbjct: 750 DISVASDLDREDRATFSVIVTASDHATPPLNTSTQIEVILDDINDNAPQFTSSSYAATIS 809
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+ +G+ +S ++A IG N
Sbjct: 810 EDIPVGTSFLQVSAIDADIGSN 831
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P E +L+ +T+ D+NDNAP FAS + +ILE
Sbjct: 327 IQTAAPLDRETLSLIRLDVIASDKGIPKKESKALVEITVLDVNDNAPVFAS-DSYITILE 385
Query: 62 NAEIGS-LSTVNAT 74
N + + ++TV AT
Sbjct: 386 NITLPTVIATVKAT 399
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LDRE ARY+L +D P + +T+ L DINDNAP F + +I E
Sbjct: 532 IKTTKLLDRETTARYSLKVTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEYNVTISE 591
Query: 62 NAEIGS 67
GS
Sbjct: 592 EMPRGS 597
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ +DRE + ++ L +R P + + + + D+ DN+P F I
Sbjct: 221 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIR 280
Query: 61 ENAEIGS 67
E+A IG+
Sbjct: 281 EDAPIGT 287
>gi|1587676|prf||2207206A E-cadherin
Length = 886
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA+YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 218 LKVTEPLDREHIAKYTLFSHAVSSNAHAIEDPMEIVITVTDQNDNRPEFTQAVFKGSVME 277
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 278 GALPGTSVMQVTAT 291
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TDINDN P F + EN
Sbjct: 336 GLDRETCPEYTLVVQAADLQGEGLSTTAEAVITVTDINDNPPVFNPTTYRGQVPENEANY 395
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 396 LVATLKVT 403
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1905 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1964
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ ++ V+A +GVN
Sbjct: 1965 APLGTSVLQINAVDADLGVN 1984
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 462 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 521
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 884 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 942
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 943 SAELGA 948
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 297 ENATVGT 303
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1317 IRTRVVLDHEERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1376
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1377 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1409
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1207 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1257
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1111 LDRETRDRYQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1170
Query: 68 LSTV 71
+ V
Sbjct: 1171 VVGV 1174
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1905 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPSFKLSKYTGSVQED 1964
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ ++ V+A +GVN
Sbjct: 1965 APLGTSVLQINAVDADLGVN 1984
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 462 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 521
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 884 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 942
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 943 SAELGA 948
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 297 ENATVGT 303
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1111 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1170
Query: 68 LSTV 71
+ V
Sbjct: 1171 VVGV 1174
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E + ++ + + D+NDN P F S + E
Sbjct: 1317 IRTRVVLDHEERSIYRLGVAASDGGSPPRETIRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1376
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1377 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1409
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1207 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1257
>gi|443710969|gb|ELU04951.1| hypothetical protein CAPTEDRAFT_82390, partial [Capitella teleta]
Length = 688
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE I Y L +D +P + + +TDINDNAP+F+ ++ ASI
Sbjct: 401 KITTMTSLDREAIPFYDLKITCEDDGEPKLYAQKTLPVAITDINDNAPQFSQLVYLASIT 460
Query: 61 ENAEIG-SLSTVNAT 74
ENA G S+ T +AT
Sbjct: 461 ENAAHGTSVFTASAT 475
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +ARY L A DR P+ +T+ + DIND+ P F + I E
Sbjct: 968 IRTAKPLDRESVARYVLKAIAMDRGSPSLSTTVPVTIKIEDINDSPPAFENDKIVLYIAE 1027
Query: 62 NAEIGS 67
N+ +GS
Sbjct: 1028 NSPVGS 1033
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE I Y L +D P + + +++TD+NDN+P F + SI E
Sbjct: 864 ITTTRPLDRELIPAYLLTVTARDGGVPPLSDTTDVEISVTDVNDNSPVFEAPQYQGSIPE 923
Query: 62 NAEIG-SLSTVNAT 74
+ +G S+ V+AT
Sbjct: 924 DVLVGTSVLRVSAT 937
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY D + + + LT+TD+NDN P F A + E
Sbjct: 653 IYTTKQLDREQCSRYQFTVIAADSGEAPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVTSVTAT 726
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVKDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN IG
Sbjct: 601 ENVAIG 606
>gi|119514175|gb|ABL75839.1| protocadherin 1A2 [Takifugu rubripes]
Length = 958
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE I RY + V D+ P I L + DINDNAP F+ + + ++
Sbjct: 405 ELIVSKPLDREVIGRYEITLMVTDKGSPPLAENETIALEILDINDNAPRFSQSVYTIHVV 464
Query: 61 ENAEIGSLST 70
EN + G+L T
Sbjct: 465 ENNQPGALLT 474
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 7 GLDREKIARYTLNAHVQDRDQP--------------AWECVSLITLTLTDINDNAPEFAS 52
G D K LNAH+ +QP A + I + + DINDN P FA
Sbjct: 182 GSDGSKYVDLVLNAHLNREEQPIHRLILTAVDGGVPARSGTASIVINVLDINDNPPVFAQ 241
Query: 53 VINSASILENAEIGS-LSTVNAT 74
+ + ++ EN G+ + T+ AT
Sbjct: 242 PVFAVNVSENPAAGTVVMTLKAT 264
>gi|63114|emb|CAA41408.1| B-cadherin [Gallus gallus]
Length = 726
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA- 63
A GLDRE++ YTL D D +L + +TD+NDNAPEF A++ EN
Sbjct: 176 ASGLDRERVREYTLTMQAADLDGQGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEA 235
Query: 64 --EIGSLSTVN 72
E+ L+T +
Sbjct: 236 ELEVARLATTD 246
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K + LDRE I +Y L +H V + +P E + +I +T+TD NDN P+F + S+
Sbjct: 60 MKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEII-VTVTDQNDNKPQFTQEVFRGSVP 118
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ VNAT
Sbjct: 119 EGALPGTSVMRVNAT 133
>gi|416739|sp|P33145.1|CADHK_CHICK RecName: Full=B-cadherin; AltName: Full=K-CAM protein; Flags:
Precursor
gi|212227|gb|AAA48929.1| B-cadherin [Gallus gallus]
Length = 732
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA- 63
A GLDRE++ YTL D D +L + +TD+NDNAPEF A++ EN
Sbjct: 182 ASGLDRERVREYTLTMQAADLDGQGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEA 241
Query: 64 --EIGSLSTVN 72
E+ L+T +
Sbjct: 242 ELEVARLATTD 252
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K + LDRE I +Y L +H V + +P E + +I +T+TD NDN P+F + S+
Sbjct: 66 MKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEII-VTVTDQNDNKPQFTQEVFRGSVP 124
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ VNAT
Sbjct: 125 EGALPGTSVMRVNAT 139
>gi|350587824|ref|XP_003482493.1| PREDICTED: protocadherin Fat 4-like [Sus scrofa]
Length = 1741
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK A+Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 509 EIRSIRPLDREKTAQYVLTIKSSDKGSPSQSASVKVIINILDENDNAPRFSQIF-SAHVP 567
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IGVN
Sbjct: 568 ENSPLGYTVTRVTTSDEDIGVN 589
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 405 QVSISQALDFEKIQKYVVWIEARDGGFPPFSAYEKLDITVLDVNDNSPVFKEDPFVSEIL 464
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 465 ENLSPRKILTVSA 477
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 611 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRPSYYLDCP 667
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 668 ELPEIGSRVTQVSAT 682
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 1253 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--ISEGEVMENKRSGT 1310
Query: 68 L 68
L
Sbjct: 1311 L 1311
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 1351 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 1402
>gi|449475308|ref|XP_004175477.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3-like
[Taeniopygia guttata]
Length = 821
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+++ Y + D PA + +++ L + D+NDNAP FA SA + EN
Sbjct: 415 TARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFAEERYSARLSENN 474
Query: 64 EIGSL 68
G+L
Sbjct: 475 AAGAL 479
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LDRE+ A YTL +DR +PA + + L + D NDN+P F SAS+ E
Sbjct: 2105 LRVAGPLDREQRANYTLRLIAKDRGEPARSTLQTVQLLVLDENDNSPIFDPRQYSASVAE 2164
Query: 62 NAEIGS 67
NA IG+
Sbjct: 2165 NASIGA 2170
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I+ Y L +DR P + + +T+ D NDN P F + S ++
Sbjct: 2738 EISTNAKLDREEISSYELIVEARDRGTPQLTGTATVLVTVLDKNDNPPRFTRLF-SVNVT 2796
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRG 86
EN+EIG+ +++ + IG N ++F G
Sbjct: 2797 ENSEIGAFVIRITSSDQDIGANANVSYSFTG 2827
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
L T R LDRE + Y L D +P ++ +T++L D+ND +PEF S N S
Sbjct: 1998 LYTRRLLDRENKSVYNLVLEAADSPRPPTTPLASTIQVTISLLDVNDQSPEFVSS-NQTS 2056
Query: 59 ILENAEIGSL 68
ILENA I S+
Sbjct: 2057 ILENAAINSV 2066
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDN P F + SA ++ENA IGS
Sbjct: 1900 LDYEQVQHYILVVQATDGGLPALSSTVTVYCNVVDLNDNTPIFEAGPRSAELMENATIGS 1959
Query: 68 L 68
+
Sbjct: 1960 V 1960
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ T LDRE+ A Y L QD +P V+L T+T+TD+NDNAP FAS +A
Sbjct: 2424 EIVTLERLDREQTAVYHLTLVAQDSSPTEPKAAAVNL-TITVTDLNDNAPRFASPRYTAY 2482
Query: 59 ILENAEIGSL 68
+ ++ G
Sbjct: 2483 VPDSTGKGDF 2492
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y LN +D+ +P ++ +T+ D+NDN P F ++ E
Sbjct: 164 LETTGKLDREQVEYYHLNVCARDKGRPPKLGCLMVNVTVLDVNDNPPIFQQSDYVVTLNE 223
Query: 62 NAEIGS 67
+A +G+
Sbjct: 224 SAAVGT 229
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE ++ Y L D P ++ + + D+ND++PEF AS+ EN
Sbjct: 2325 RPLDRELVSEYVLTLVAMDTGSPPLTGSGIVRVVVLDVNDHSPEFNRQEYRASVTENLPA 2384
Query: 66 GS 67
G+
Sbjct: 2385 GA 2386
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I Y L D+ P + + + + D+ND+ P F SA + E + IG
Sbjct: 398 LDREEIPMYNLTIVATDKGSPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGS 457
Query: 67 ---SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 458 FVASISATDADSGLN 472
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE + Y + +D+ P + + LTL D+NDN P F ++
Sbjct: 604 QLMTKITLDRESVEEYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNYFFTVP 663
Query: 61 ENAEIGSL 68
++A G+L
Sbjct: 664 QDATPGTL 671
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ A LDRE Y L D Q +S++ +TD NDNAP F + S +L
Sbjct: 1790 QLRLAEALDREAKESYVLRVRADDGLQHTDVTLSIL---VTDTNDNAPSFQATAYSFDVL 1846
Query: 61 ENAEIGS 67
EN GS
Sbjct: 1847 ENVPRGS 1853
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D +P+ V + + +TD NDNAP S + +AS+
Sbjct: 2634 EVVIASGFDYETAPHYEAWVEVRDSGEPSLRSVIQLLVNVTDANDNAPVMDSAVYNASVP 2693
Query: 61 E 61
E
Sbjct: 2694 E 2694
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE + Y L D P + + + L D+NDN P F +
Sbjct: 3445 DIETAKFLDRESVPSYELIIGAIDTGSPPQTGSATVKIELLDVNDNGPVFDPTDVIGYVS 3504
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T++AT
Sbjct: 3505 ENEPAGTSIMTLSAT 3519
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE+I + L D QP +S ++ + +TD+NDNAP F S+ SA+
Sbjct: 1453 IHTLLPIDREEIDTFKLVVVASDMAQPRSARLSAEKVVIVIVTDVNDNAPIFVSM--SAA 1510
Query: 59 IL 60
+L
Sbjct: 1511 VL 1512
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A+Y L A DR P+ V +T+ + D+ND+ P F + I E
Sbjct: 968 IRTAKPLDRESVAKYILKAVAMDRGSPSLSTVVPVTIKIEDVNDSPPAFENDKIILYIAE 1027
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1028 NSPIGS 1033
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + Y L +D P + + +++TD+NDNAP F + SI E
Sbjct: 864 ITTTKPLDREIVPAYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPE 923
Query: 62 NAEIG-SLSTVNAT 74
+ +G S+ V+AT
Sbjct: 924 DVLVGTSVLRVSAT 937
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ +RY D + + + + LT+TD+NDN P F + + E
Sbjct: 653 LYTTKQLDREQCSRYQFTVIAADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVTSVTAT 726
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN +G
Sbjct: 601 ENVPVG 606
>gi|301617307|ref|XP_002938087.1| PREDICTED: protocadherin-8-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 928
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREKI+ Y L +D P ++ V T+ ++D NDNAP FA + S+LEN
Sbjct: 410 TTSALDREKISEYNLTVVAEDLGSPPFKTVKQYTIRVSDENDNAPVFAKPVYEVSVLENN 469
Query: 64 EIGSLST 70
G+ T
Sbjct: 470 APGAYIT 476
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + YTL D P+ +++ + + D NDN+P F + ++
Sbjct: 188 DLVLMKELDRESQSAYTLELLAMDGGSPSRSGTAMVNVRVLDFNDNSPVFERSAVTVELM 247
Query: 61 ENAEIG----SLSTVNATIGVN 78
E+A +G L+ V+ GVN
Sbjct: 248 EDAPVGYLLLDLNAVDPDEGVN 269
>gi|41224975|dbj|BAD08246.1| KIAA0811 protein [Homo sapiens]
Length = 1123
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 237 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 296
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 297 ENSPIGS 303
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 139 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 198
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 199 VILTVSATDEDGPLNSDITYSLIGGNQLGH 228
>gi|354500185|ref|XP_003512181.1| PREDICTED: protocadherin beta-15-like [Cricetulus griseus]
Length = 683
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P S I + L D+NDNAPEF + IL
Sbjct: 182 ELVLDKELDREEQAEFRLTLTALDGGSPPRTGTSQIRIILVDVNDNAPEFVQALYQVQIL 241
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 242 ENSPVGSL 249
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + +T+ ++D+NDNAP F + + E
Sbjct: 392 LMTEGALDRESRAEYNITITVTDLGTPRLKTQHTLTVQVSDVNDNAPAFTQTSYTLFVQE 451
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 452 NNSPALHIGTISATDSDSGSN 472
>gi|229442271|gb|AAI72778.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 1258
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 286 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 345
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 346 ENSPIGS 352
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 188 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 247
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 248 VILTVSATDEDGPLNSDITYSLIGGNQLGH 277
>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos saltator]
Length = 3166
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +ARY+L A DR PA V + + + DIND+ P F + I E
Sbjct: 971 VRTAKSLDRESVARYSLKAVAIDRGSPALSSVVPMIIKIEDINDSPPAFENDKIVLYIAE 1030
Query: 62 NAEIGS 67
N+ +GS
Sbjct: 1031 NSPVGS 1036
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE ++ Y L +D P + + +++TD+NDNAP F + SI E
Sbjct: 867 ITTTRALDRELVSSYLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPE 926
Query: 62 NAEIGS 67
+ +G+
Sbjct: 927 DVLVGT 932
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN +G
Sbjct: 601 ENVPLG 606
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 2 LKTARGLDRE---KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+ T + LDRE K ++Y D + A + + LT+TD+NDN P F A
Sbjct: 653 IYTTKQLDREQCSKYSKYQFTIIAADSGEEAKSMSATVILTVTDVNDNDPYFEPKNYEAV 712
Query: 59 ILENAEIGS-LSTVNAT 74
+ E+ G+ +++V AT
Sbjct: 713 VSEDDPPGTPVTSVTAT 729
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF + S ++
Sbjct: 3079 ELKTSMPLDREQQAVYYL--LVKATDGGGRFCQANIILTLEDVNDNAPEFTADPYSITVF 3136
Query: 61 ENAEIGSLST----VNATIGVNRCGH 82
EN E +L T +A G+NR H
Sbjct: 3137 ENTEPKTLLTRVQATDADAGMNRKIH 3162
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDREKI+ YTL D P + + + ++D+NDN P F+ S I
Sbjct: 3392 EIKVTKLLDREKISGYTLTVQASDNGNPPRLNTTTVNIDVSDVNDNPPVFSKGNYSVIIQ 3451
Query: 61 ENAEIG 66
EN IG
Sbjct: 3452 ENKPIG 3457
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++ L V+D+D P + I ++++D ND+AP F S + E
Sbjct: 1515 LYTSEKLDHETMNQHILTVMVRDQDVPVKRNYARIIISVSDTNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1575 SAAVGS 1580
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDNAPEF + E
Sbjct: 775 LKILSPLDREVKDKYTLNITVYDLGVPQKSAWHLLDIKILDANDNAPEFLQDSYFVELNE 834
Query: 62 ----NAEIGSLSTVNATIGVN 78
N+EI + + +G N
Sbjct: 835 NKEPNSEIIQIEATDKDLGAN 855
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +Y + DR ++ ++++ +T+TD+NDN P F + I ++
Sbjct: 2870 ITTLKELDHEKRDKYRITVIASDRGEKIQLSSLAVVEVTVTDVNDNPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2930 EDDPPGGVIAILSTTDA 2946
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K A+ LDR K Y+L D+ P V+ + + +T ++ +P+F + S I E
Sbjct: 1620 IKIAKELDRSKQEEYSLMVKATDKGDPPMSEVTSVHIFVTVSDNASPKFTAKEYSTEISE 1679
Query: 62 NAEIGSL 68
+A IGS
Sbjct: 1680 SASIGSF 1686
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V + + +TDINDN P F+ +VI+ +ILE
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAILEQ 3353
Query: 63 AEIGSLSTVNATIGVNRCGH 82
+ I ++ +A N C H
Sbjct: 3354 SVITVMAD-DADGPSNNCIH 3372
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D P S + +++ DINDN P F SAS+
Sbjct: 3182 IRLEKPLDRELQAVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEHREYSASVS 3241
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 3242 EDVLVGT 3248
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + D+ I + + D+NDNAP+ + ++E
Sbjct: 1092 IETADRLDRETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
>gi|432093592|gb|ELK25574.1| Cadherin-1 [Myotis davidii]
Length = 443
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 169 LKVTQPLDREAIAKYTLLSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQAVFEGSVVE 228
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 229 GALPGTSVMQVTAT 242
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+YTL +H + A E I +T+ D NDN PEF + S++E
Sbjct: 369 LKVTQPLDREAIAKYTLLSHAVSSNGNAVEDPMEIVITVRDQNDNRPEFTQAVFEGSVVE 428
Query: 62 NA 63
A
Sbjct: 429 GA 430
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIF-SAYVS 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGIN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ D P + + ++L DINDN+P F V A I E
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGT 2171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2622 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2682 ENLSPRKILTVSAT 2695
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FA+ + SI
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIA 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDARTGT 2381
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 3463 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL--TVSEGEVL 3520
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3521 ENKRPGTL 3528
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LKT + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2885 ELPELGSRVTQVSAT 2899
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR + +TL D+ND P F S ++ E
Sbjct: 2211 ITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE ++Y+L D Q I +T++D+ND+ P F+ + S I
Sbjct: 1795 DLIATKRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPRFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S + +
Sbjct: 847 QLTTASVIDREEQSFYQLKIVASGG---AVTGDTVVNITVKDLNDNAPHFLQAVESINAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS L +T D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3619
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+IA Y L +D QP+ + + +T+ D NDN P+F + S ++
Sbjct: 2222 EISTNAKLDREEIASYELIVEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLF-SVNVT 2280
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 2281 ENAEIGTF 2288
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR QP L+ +T+ D+NDN P F ++ E
Sbjct: 229 LETTGKLDREQVEFYSLNVCARDRGQPPRLGYLLVNVTVLDVNDNPPIFQQSDYVVALNE 288
Query: 62 NAEIGS-LSTVNAT 74
+A IG+ + TV AT
Sbjct: 289 SAPIGTKVLTVRAT 302
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE+I +Y L D+ P + + + + D+ND+ P F SA + E + IG
Sbjct: 462 GLDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIG 521
Query: 67 ----SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 522 SFVASISATDADSGLN 537
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE IA Y + +D+ P + + LTL D+NDN+P F ++
Sbjct: 669 QLTTKVHLDRETIAEYRILVIAKDQGTPPQSSTATVILTLKDVNDNSPVFYPWRYLMAVP 728
Query: 61 ENAEIG-SLSTVNAT 74
E+A G S+ V AT
Sbjct: 729 EDAPPGTSVGKVMAT 743
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE + YTL +DR +P + +T+T+ D NDN+P F SA++ E
Sbjct: 1590 LRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTTVTVTVLDKNDNSPVFDPRQYSATVAE 1649
Query: 62 NAEIGS 67
NA IG+
Sbjct: 1650 NASIGA 1655
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA V + + +TD NDNAP + I +A++
Sbjct: 2118 EVLVASGFDYETAPFYEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPVMEAAIYNATVP 2177
Query: 61 E 61
E
Sbjct: 2178 E 2178
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE I Y L D P + + + L DINDN P F +
Sbjct: 2963 DIETAKQLDRETIPVYDLTIGAIDTGSPPQTGTAAVHIELMDINDNGPIFDPPEVVGYVN 3022
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 3023 ENEPAGTIIMTLSATDPDLPPNGAPFTYK 3051
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
R LDRE + YTL D P ++ + + D+ND+ PEF A++ EN+
Sbjct: 1810 RPLDRELVPEYTLTLVAMDTGSPPLTGSGIVRIVVLDVNDHIPEFTRQEYRATVTENS 1867
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDNAP F + ++ I+EN IG+
Sbjct: 1387 LDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEAGPHAVDIVENTTIGT 1446
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN D A + V+++T+ ++DINDN P F + A + EN+ S
Sbjct: 2652 LDYDLVQEYKLNITATDLGFEAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDS 2711
Query: 68 L 68
Sbjct: 2712 F 2712
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW+ + +T+T+ D NDN PEF
Sbjct: 2332 LDREEQDEYLLKLVAADG---AWQAATALTITIQDQNDNPPEF 2371
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
E+ T LDRE+ + Y L QD +P V+L T+ + D+NDNAP F+S
Sbjct: 1909 EVFTVVPLDREQTSVYHLTLVAQDSSPTEPQASAVNL-TIFVKDVNDNAPRFSS 1961
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC----VSLITLTLTDINDNAPEFASVINSA 57
++ A+ L+ E+ +RY L +D E + +T+T+ DINDNAP F A
Sbjct: 1695 IRVAKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVLDINDNAPVFLDSPYLA 1754
Query: 58 SILEN 62
++EN
Sbjct: 1755 HVMEN 1759
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
++KTA+ LDRE ++ R+ L V QP + + + + DINDN PEF + S
Sbjct: 117 KIKTAKVLDREALSSDRFDL---VVLSSQPTYPIE--VRILVLDINDNDPEFPESSIAVS 171
Query: 59 ILENAEIGS 67
E+A +G+
Sbjct: 172 FSESAVVGT 180
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKISHYVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPPLSSSAEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLTITATDSGSPALTGTGTINVIVDDVNDNVPTFASKSYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVIWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKVLTVSA 2692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR + S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYLLTVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + +T+ +TD+NDNAP F+ E E
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTE 2886
Query: 65 IGS-LSTVNAT 74
GS ++ V+AT
Sbjct: 2887 TGSKVTQVSAT 2897
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPVYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V + V + +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR P+ + +T+ + D NDNAP+F + + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFNQPEGYDVSVVE 594
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 595 NAPTGTELLVLRATDG 610
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
Flags: Precursor
Length = 4981
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIF-SAYVS 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGIN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ D P + + ++L DINDN+P F V A I E
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGT 2171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2622 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2682 ENLSPRKILTVSAT 2695
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FA+ + SI
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIA 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDARTGT 2381
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 3463 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL--TVSEGEVL 3520
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3521 ENKRPGTL 3528
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LKT + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2885 ELPELGSRVTQVSAT 2899
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR + +TL D+ND P F S ++ E
Sbjct: 2211 ITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE ++Y+L D Q I +T++D+ND+ P F+ + S I
Sbjct: 1795 DLIATKRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPRFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S + +
Sbjct: 847 QLTTASVIDREEQSFYQLKIVASGG---AVTGDTVVNITVKDLNDNAPHFLQAVESINAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS L +T D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3619
>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Takifugu rubripes]
Length = 2876
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE + YTL A DR P + I + + DINDNAP F + + E
Sbjct: 774 IRTARKLDRENVPVYTLKAFAVDRGVPPLKAPVSIHVVVQDINDNAPVFEKDVLFIDVEE 833
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 834 NSPVGSV 840
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + V D P S +T+T++D ND++P F + SI E
Sbjct: 144 ITTIQPLDREIKDTHVFKVTVTDHGSPKRAATSYLTVTVSDTNDHSPVFEQIEYRVSIRE 203
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + T+ AT G
Sbjct: 204 NVEVGFEVMTIRATDG 219
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE YT +D P + +++T+ D+NDN P F + S I E+A +G
Sbjct: 469 LDRETTDFYTFGVEARDHGVPVMSSSASVSITVLDVNDNVPAFTEKVYSLKINEDAIVGT 528
Query: 67 SLSTVNA 73
S+ TV A
Sbjct: 529 SVLTVTA 535
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T +D E A YTL +D P + + + + D NDN P+F + ++ E
Sbjct: 668 ITTQMEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIVQDANDNTPQFLRDMYQGTVFE 727
Query: 62 NAEIGS----LSTVNATIGVN-RCGHTFRGKD 88
+A + + +S + G N R +TF+G D
Sbjct: 728 DAPVYTSVLQISASDRDSGTNGRVSYTFQGGD 759
>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
Length = 3159
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QPA + I + + D+NDN P F + S S+
Sbjct: 2187 ELQVAKALDWEQTSSYSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQ 2246
Query: 61 ENAEIGS 67
ENA IGS
Sbjct: 2247 ENAPIGS 2253
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 1138 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVS 1197
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 1198 ELATCGHL 1205
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + L V D +P+ S + + + D+NDN P F+ + + + E
Sbjct: 2 LATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPE 61
Query: 62 NAEIGS 67
G+
Sbjct: 62 RLNPGT 67
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E +Y L+ + + ++ I + +TDIN++ P F + S +LE
Sbjct: 2083 LYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLE 2142
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT IG N+ GH
Sbjct: 2143 NAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGH 2178
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDREK Y+L A D + C + +TL + D+NDNAP F ++ ++
Sbjct: 1876 DLTTLTALDREKKDVYSLVAKATDGGGQS--CQADVTLHVEDVNDNAPRFFPSHSAVAVF 1933
Query: 61 ENAEI 65
+N +
Sbjct: 1934 DNTTV 1938
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G DRE+ + + ++D P +L+ +++ D+NDN+PEF + I + E G
Sbjct: 835 GFDREQQDTHEVAVELRDNRTPQRVAQALVRVSVEDVNDNSPEFKHLPYHTIIQDGTEPG 894
Query: 67 ----SLSTVNATIGVN 78
+S + +GVN
Sbjct: 895 DVLFQVSATDQDLGVN 910
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATIG 76
L+ +++TD NDNAP FAS S++EN+E G +L T++A I
Sbjct: 1701 LVEVSITDENDNAPRFASEDYRGSVVENSEPGEPVATLKTLDADIA 1746
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTLAPLDREEQAIY--NLLVKATDGGGRFCQANIMLTLEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3136 ENTEPGTPLTRVQATDADAGLNR 3158
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVRVTKLLDRETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEALDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITAFDLGMPQKAAWHLLDIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVNS 839
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A + E+A
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTYTAVVSEDA 3348
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + I + + D+NDNAP+ + + ++E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPEVME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P V+ I + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTVARIIVKILDENDNKPQF 1245
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F + A I E+A
Sbjct: 2346 RTLDYEQFQQHRIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQLYEAKISEHATH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
Length = 4347
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QPA + I + + D+NDN P F + S S+
Sbjct: 3375 ELQVAKALDWEQTSSYSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQ 3434
Query: 61 ENAEIGS 67
ENA IGS
Sbjct: 3435 ENAPIGS 3441
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 768 LTVAAPLDYEATSFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE 827
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 828 DTEVGT 833
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2326 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2385
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2386 ELATCGHL 2393
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + L V D +P+ S + + + D+NDN P F+ + + + E
Sbjct: 1190 LATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPE 1249
Query: 62 NAEIGS 67
G+
Sbjct: 1250 RLNPGT 1255
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E +Y L+ + + ++ I + +TDIN++ P F + S +LE
Sbjct: 3271 LYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLE 3330
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT IG N+ GH
Sbjct: 3331 NAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGH 3366
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDREK Y+L A D C + +TL + D+NDNAP F ++ ++
Sbjct: 3064 DLTTLTALDREKKDVYSLVAKATDGG--GQSCQADVTLHVEDVNDNAPRFFPSHSAVAVF 3121
Query: 61 ENAEI 65
+N +
Sbjct: 3122 DNTTV 3126
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G DRE+ + + ++D P +L+ +++ D+NDN+PEF + I + E G
Sbjct: 2023 GFDREQQDTHEVAVELRDNRTPQRVAQALVRVSVEDVNDNSPEFKHLPYHTIIQDGTEPG 2082
Query: 67 ----SLSTVNATIGVN 78
+S + +GVN
Sbjct: 2083 DVLFQVSATDQDLGVN 2098
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATIG 76
L+ +++TD NDNAP FAS S++EN+E G +L T++A I
Sbjct: 2889 LVEVSITDENDNAPRFASEDYRGSVVENSEPGEPVATLKTLDADIA 2934
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPE 49
E+ LDRE RY L V+ RDQP V+ + +TL D+NDN+P+
Sbjct: 870 EMVVTGHLDRESEPRYILK--VEARDQPRKGHQLFSVTDLIITLEDVNDNSPQ 920
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
L + LD E+ A Y L+ D +P A + + +T+ D+N+N P FAS ++
Sbjct: 977 LSLEKELDFERRAGYNLSLWASDSGKPLARRTLCHVEVTVLDVNENLHPPRFASFVHQGQ 1036
Query: 59 ILENAEIGSLSTVNA 73
+ EN+ G+ V A
Sbjct: 1037 VQENSPSGTSVMVVA 1051
>gi|410931117|ref|XP_003978942.1| PREDICTED: protocadherin Fat 2-like, partial [Takifugu rubripes]
Length = 1091
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A LDRE++ Y+L D P LIT+T+ D+NDN P F+ V +S +
Sbjct: 105 EISVATALDREEVPHYSLTVQAADEGAPPLSSAVLITITVADVNDNPPIFSQVNHSLMLQ 164
Query: 61 ENAEIGS 67
E GS
Sbjct: 165 EGESTGS 171
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI++Y L D+ P+ + + + D NDNAP+F+ + SA +
Sbjct: 1069 EIRSIRPLDREKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPKFSQIF-SAHVP 1127
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + +GVN
Sbjct: 1128 ENSPLGYTVTRVTTSDEDVGVN 1149
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ R LDRE R+ L D PA + + + D NDN P FAS + ++
Sbjct: 658 ELRVTRSLDRETKERFVLTITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVP 717
Query: 61 ENAEIGS-LSTVNAT 74
E+A G+ + VNA+
Sbjct: 718 EDAPTGTDVLLVNAS 732
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QPA + + + + DINDN+P FA + +
Sbjct: 448 EVRLTGELDREAVSNYTLTVLATDKGQPALSSSAEVVVVVLDINDNSPAFAQALYRVEMS 507
Query: 61 ENAEIGS 67
E+ G+
Sbjct: 508 EDTLTGT 514
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 1171 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 1227
Query: 61 ENAEIGS-LSTVNAT 74
E +EIGS ++ V+AT
Sbjct: 1228 ELSEIGSKVTQVSAT 1242
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q + I +T++D+ND++P+F+ + S I
Sbjct: 140 DLIATRRLDRERRSKYSLLVRADDGLQSS---DMRINITVSDVNDHSPKFSRPVYSFDIP 196
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 197 EDTTPGSL 204
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P + ++EN G+
Sbjct: 1813 LDRETLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TVCEGEVMENKRPGT 1870
Query: 68 LST 70
L T
Sbjct: 1871 LVT 1873
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E+I ++ + +D P + + +T+ D+NDN+P F + IL
Sbjct: 965 QVSISQPLDFERIQKFVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPVFKEDPFVSEIL 1024
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 1025 ENLSPRKILTVSA 1037
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 3 KTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+ G I R++ DR P+ + +T+ + D NDNAP+F + + +N
Sbjct: 1281 QNVSGFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKMKYFTPVTKN 1340
Query: 63 AEIGS 67
++G+
Sbjct: 1341 VKVGT 1345
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFAS 52
L + LDRE + Y+L V D PA + +++ L D+NDN P F S
Sbjct: 345 LTVLKSLDRESQSFYSLVVQVHDLPPPPAKNSTAQVSIILLDVNDNPPTFLS 396
>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
Length = 4343
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QPA + I + + D+NDN P F + S S+
Sbjct: 3375 ELQVAKALDWEQTSSYSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQ 3434
Query: 61 ENAEIGS 67
ENA IGS
Sbjct: 3435 ENAPIGS 3441
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 768 LTVAAPLDYEATSFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE 827
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 828 DTEVGT 833
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2326 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2385
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2386 ELATCGHL 2393
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ S + + + D+NDN P F+
Sbjct: 1190 LATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVVVRIVDVNDNPPVFS 1239
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK Y+L A D C + + L + D+NDNAP F ++ ++
Sbjct: 3064 ELTTLTALDREKKDAYSLVAKATDGG--GQSCQADVILHVEDVNDNAPRFFPSHSAVAVF 3121
Query: 61 ENAEI 65
+N +
Sbjct: 3122 DNTTV 3126
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G DRE+ + + ++D P +L+ +++ D+NDN+PEF + I + E G
Sbjct: 2023 GFDREQQDTHEVAVELRDNRTPQRVAQALVRVSVEDVNDNSPEFKYLPYHTIIQDGTEPG 2082
Query: 67 ----SLSTVNATIGVN 78
+S + +GVN
Sbjct: 2083 DVLFQVSATDQDLGVN 2098
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATI 75
L+ +++TD NDNAP FAS S++EN+E G +L T++A I
Sbjct: 2889 LVEVSITDENDNAPRFASEDYRGSVVENSEPGEPVATLKTLDADI 2933
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E ++ L+ + + ++ I + +TD+N++ P F + S +LE
Sbjct: 3271 LYVNKSLDFETSPKHFLSIECSRKGSSSLSDMTTIVVNITDVNEHQPRFPQHLYSTRVLE 3330
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT IG N+ GH
Sbjct: 3331 NAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGH 3366
>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
Length = 4347
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QPA + I + + D+NDN P F + S S+
Sbjct: 3375 ELQVAKALDWEQTSSYSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRFFQLNYSTSVQ 3434
Query: 61 ENAEIGS 67
ENA IGS
Sbjct: 3435 ENAPIGS 3441
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 768 LTVAAPLDYEATSFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE 827
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 828 DTEVGT 833
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2326 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVS 2385
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2386 ELATCGHL 2393
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + L V D +P+ S + + + D+NDN P F+ + + + E
Sbjct: 1190 LATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPE 1249
Query: 62 NAEIGS 67
G+
Sbjct: 1250 RLNPGT 1255
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E +Y L+ + + ++ I + +TDIN++ P F + S +LE
Sbjct: 3271 LYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVLE 3330
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT IG N+ GH
Sbjct: 3331 NAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGH 3366
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDREK Y+L A D C + +TL + D+NDNAP F ++ ++
Sbjct: 3064 DLTTLTALDREKKDVYSLVAKATDGG--GQSCQADVTLHVEDVNDNAPRFFPSHSAVAVF 3121
Query: 61 ENAEI 65
+N +
Sbjct: 3122 DNTTV 3126
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G DRE+ + + ++D P +L+ +++ D+NDN+PEF + I + E G
Sbjct: 2023 GFDREQQDTHEVAVELRDNRTPQRVAQALVRVSVEDVNDNSPEFKHLPYHTIIQDGTEPG 2082
Query: 67 ----SLSTVNATIGVN 78
+S + +GVN
Sbjct: 2083 DVLFQVSATDQDLGVN 2098
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATIG 76
L+ +++TD NDNAP FAS S++EN+E G +L T++A I
Sbjct: 2889 LVEVSITDENDNAPRFASEDYRGSVVENSEPGEPVATLKTLDADIA 2934
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPE 49
E+ LDRE RY L V+ RDQP V+ + +TL D+NDN+P+
Sbjct: 870 EMVVTGHLDRESEPRYILK--VEARDQPRKGHQLFSVTDLIITLEDVNDNSPQ 920
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
L + LD E+ A Y L+ D +P A + + +T+ D+N+N P FAS ++
Sbjct: 977 LSLEKELDFERRAGYNLSLWASDSGKPLARRTLCHVEVTVLDVNENLHPPRFASFVHQGQ 1036
Query: 59 ILENAEIGSLSTVNA 73
+ EN+ G+ V A
Sbjct: 1037 VQENSPSGTSVMVVA 1051
>gi|109506501|ref|XP_001056235.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|109507211|ref|XP_001065549.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|149017309|gb|EDL76360.1| rCG49585 [Rattus norvegicus]
Length = 795
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P S I + + D+NDNAPEFA IL
Sbjct: 191 ELVLDKELDREEQAEFRLTLTALDGGSPPRTGTSQIRIIVLDVNDNAPEFAQAFYRVQIL 250
Query: 61 ENAEIGSL----STVNATIGVN 78
EN+ +GSL S ++ IG N
Sbjct: 251 ENSPLGSLVAKVSAKDSDIGTN 272
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 401 LMTDGALDRESRAEYNITIFVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 460
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 461 NNSPALHIGTISATDSDSGSN 481
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+L R +D E + + + DR PA +L+ + + D NDNAP + +AS+
Sbjct: 510 QLFALRAMDYEALQAFEFHVGATDRGSPALSSQALVRVVVLDNNDNAPFVLYPLQNASV 568
>gi|301617305|ref|XP_002938086.1| PREDICTED: protocadherin-8-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 1002
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREKI+ Y L +D P ++ V T+ ++D NDNAP FA + S+LEN
Sbjct: 410 TTSALDREKISEYNLTVVAEDLGSPPFKTVKQYTIRVSDENDNAPVFAKPVYEVSVLENN 469
Query: 64 EIGSLST 70
G+ T
Sbjct: 470 APGAYIT 476
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE + YTL D P+ +++ + + D NDN+P F + ++
Sbjct: 188 DLVLMKELDRESQSAYTLELLAMDGGSPSRSGTAMVNVRVLDFNDNSPVFERSAVTVELM 247
Query: 61 ENAEIG----SLSTVNATIGVN 78
E+A +G L+ V+ GVN
Sbjct: 248 EDAPVGYLLLDLNAVDPDEGVN 269
>gi|410989771|ref|XP_004001132.1| PREDICTED: protocadherin beta-16, partial [Felis catus]
Length = 575
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ A+Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 403 LVTKRALDREERAQYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGAN 483
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 629 EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIF-SAYVS 687
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 688 ENSPLGYTVTRVTTSDEDIGIN 709
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 63 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGT 122
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 525 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEIL 584
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 585 ENLSPRKILTVSAT 598
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 1366 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVLT--VSEGEVL 1423
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 1424 ENKRPGTL 1431
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 731 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 787
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 788 ELPELGSRVTQVSAT 802
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR + +TL D+ND P F S ++ E
Sbjct: 162 ITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 221
Query: 62 NAEIGSLSTVNATIGVNRCGHTFRGKDL 89
N +G+L + + + +R L
Sbjct: 222 N--LGTLPRAILQVSILKHSRVYRSPAL 247
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 1471 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 1522
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y L V DR P +++ +T+TD NDNAP F+S A + EN++IG+
Sbjct: 2515 LDRETTESYELTVSVSDRGIPPLNSSAVVRVTVTDCNDNAPIFSSTEYHAQVSENSQIGT 2574
Query: 68 ----LSTVNATIGVN 78
+S + +G+N
Sbjct: 2575 SLLQVSAQDPDLGIN 2589
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE D +P + +++TL D+NDN P F + S SI E
Sbjct: 501 VTTAAALDRESQEELWFLVVAADGGEPTLSSTATVSVTLEDVNDNEPVFQQQLYSVSIPE 560
Query: 62 NAEIGS 67
++++GS
Sbjct: 561 HSDVGS 566
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF----ASVINSASILEN 62
LDRE+ ++TL V D+ P + + + +TDINDN+P+F AS S + +
Sbjct: 1140 ALDRERHGQHTLKVMVTDQGHPRLNATATVHILITDINDNSPQFRHIPASKELSIHMQAD 1199
Query: 63 AEIGSLST 70
A GS+ T
Sbjct: 1200 APAGSVVT 1207
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y L D+ P + + + + D+NDN+P + ++ A I E
Sbjct: 2188 LATNVALDREITSSYKLVLQASDKGTPPLSSTATVRVQVVDVNDNSPVIPA-MDPAVIAE 2246
Query: 62 NAEIGSLST 70
N GS+ T
Sbjct: 2247 NLPAGSIVT 2255
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + R LDRE+ YTL D + + L L D NDN+P F+ AS++E
Sbjct: 1773 ISSTRVLDREETENYTLTIKALDSGPIPLSSTTQLELVLLDQNDNSPSFSFRSYRASVVE 1832
Query: 62 NAEIGS 67
GS
Sbjct: 1833 GLSAGS 1838
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + + D P +T+ + D+ND AP F+ +I AS+ EN + G
Sbjct: 1570 LDYETQQVHRITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSEIIYEASVAENRDAG 1628
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR---DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
L A LDRE + + D+ + + L L D+NDN P F S ++
Sbjct: 1457 LTVAAPLDRESVPSFVFTVTATDQAISKEERKQASVTAQLFLLDVNDNRPVFVSG-DTVQ 1515
Query: 59 ILENAEIGSL 68
++E+AE+GSL
Sbjct: 1516 VMEDAEVGSL 1525
>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKEEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFS 1243
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + I E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPCIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T + LDRE + V RD ++ + LTD NDN P+F + + SI
Sbjct: 2536 QIATLQKLDRENSTERVIAIKVMARDGGGRVAFCMVKIILTDENDNPPQFKASEYTVSIQ 2595
Query: 61 EN 62
N
Sbjct: 2596 SN 2597
>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
leucogenys]
Length = 4007
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3036 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3095
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3096 ENSPIGS 3102
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 1989 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2048
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2049 ELATCGHL 2056
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2516 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2575
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2576 ENSEPGELVATLKTLDADI 2594
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFS 1243
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 2725 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLYVEDVNDNAPRFFPSHCAVAVF 2782
Query: 61 ENAEI 65
+N +
Sbjct: 2783 DNTTV 2787
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 2938 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 2997
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 2998 VILTVSATDEDGPLNSDITYSLVGGNQLGH 3027
>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFS 1243
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
Full=Cadherin family member 8; AltName: Full=Multiple
epidermal growth factor-like domains protein 1;
Short=Multiple EGF-like domains protein 1; Flags:
Precursor
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFS 1243
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFS 1243
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
>gi|76879890|dbj|BAE45762.1| putative protein product of Nbla00548 [Homo sapiens]
Length = 656
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 16 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 74
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 75 ENSPLGYTVTRVTTSDEDIGIN 96
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 118 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 174
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 175 ELTEIGS 181
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR +P+ + +T+ + D NDNAP+F +
Sbjct: 226 KYQNVTGFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVT 285
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 286 KNVKVGT 292
>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFS 1243
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPQYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
Length = 4349
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPVFS 1243
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3281
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+RGLDRE A+YTL DR PA + + + D+NDN P F+ S I E
Sbjct: 1789 LSTSRGLDRETHAKYTLEVVATDRGSPALSATVTVEVNVLDVNDNNPVFSKSSYSVEISE 1848
Query: 62 NAEIGS 67
+A G+
Sbjct: 1849 DATEGA 1854
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A G+D E + Y L V DR P +T+ D+NDN P F + +++E
Sbjct: 2526 LLLAEGVDFETKSLYNLTVVVSDRGVPQRSSSVAAVITIGDVNDNPPAFTRAEYTVTLIE 2585
Query: 62 NAEIGS 67
A G+
Sbjct: 2586 GATAGT 2591
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD E ++ D +P + + + L D+NDN P F+S +ASI E
Sbjct: 504 ITTATALDFESEPAPSVTVVAMDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASIKE 563
Query: 62 NAEIGS 67
N G+
Sbjct: 564 NTPAGT 569
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSAS 58
++ R LD EK +RYTL+ V D Q P+ V L + + D ND+AP+F +
Sbjct: 1366 DVYVVRELDYEKGSRYTLHIEVSDFSQAFPSSHLVKL-DINVQDSNDHAPQFTEDPVTIV 1424
Query: 59 ILENAEIGS 67
I EN E G+
Sbjct: 1425 IHENIEPGA 1433
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE+ + L +D P ++ + + D+ND AP F A ++E
Sbjct: 1583 LSILKSLDREEQEVFNLTIVAEDHGTPQLSTSQVLCVQVIDVNDEAPVFLRAEFEAQVME 1642
Query: 62 NAEIG-SLSTVNAT 74
N G S+ TV AT
Sbjct: 1643 NQGPGASVLTVTAT 1656
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LD E YTL + +D P +++ + + D+NDNAP FA + E
Sbjct: 1685 ITTTKELDTELQDHYTLTVYARDGGLPPNFAKTVVRVAVQDVNDNAPIFAKPFYGLEVPE 1744
Query: 62 NAEIGSLSTVNAT 74
N L + AT
Sbjct: 1745 NQAPVELCILKAT 1757
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ YTL D Q + + IT+ + DINDNAP F + ++ E+ GS
Sbjct: 2313 LDFEEKTWYTLTVRATDSQQ---QTEANITILVEDINDNAPAFTHDLYQVTLPEHTPPGS 2369
Query: 68 -LSTVNAT 74
+ TV AT
Sbjct: 2370 AVITVTAT 2377
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK + YTL D P + +T+TDIND+AP F + I E+ GS
Sbjct: 186 LDREKRSSYTLVIEAFDGGSPRKMGSMTLEVTVTDINDHAPVFNQSRYHSIISESLPQGS 245
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 26/61 (42%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ Y L D P S T+ +TD+NDN P F +I E GS
Sbjct: 403 LDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGS 462
Query: 68 L 68
Sbjct: 463 F 463
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
E+ T LDRE+ + Y + VQD P +T+ D ND+AP F
Sbjct: 1148 EISTRLALDREQQSSYQVIVVVQDGGTPPRSATGTAHITVLDENDHAPSF 1197
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEF 50
+ T+ LDREK+A Y+ D A S +T+T+ D+NDN P F
Sbjct: 1893 ITTSAPLDREKLASYSFQVFAVDLSPAAPRNSSAQVTVTVLDVNDNTPFF 1942
>gi|38195903|gb|AAR13653.1| fat-like cadherin FATJ protein [Homo sapiens]
Length = 3222
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 1022 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 1080
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 1081 ENSPLGYTVTRVTTSDEDIGIN 1102
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 403 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 462
Query: 61 ENAEIGS 67
EN G+
Sbjct: 463 ENTLTGT 469
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 613 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 672
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 673 EDAPTGT 679
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 918 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 977
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 978 ENLSPRKILTVSA 990
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 1124 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 1180
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 1181 ELTEIGS 1187
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 509 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 568
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 569 N--LGTL 573
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 1766 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML--TVSEGEVMENKRPGT 1823
Query: 68 L 68
L
Sbjct: 1824 L 1824
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 93 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 149
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 150 EDTIPGSL 157
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 298 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 351
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR +P+ + +T+ + D NDNAP+F +
Sbjct: 1232 KYQNVTGFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVT 1291
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 1292 KNVKVGT 1298
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 1864 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 1915
>gi|355688167|gb|AER98413.1| FAT tumor suppressor-like protein 1 [Mustela putorius furo]
Length = 1538
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + + LTL D+NDNAPEF++ + + ++
Sbjct: 237 ELKTLAPLDREEQAIY--NLLVKATDGGGRFCQANLVLTLEDVNDNAPEFSADLYAITVF 294
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+N+
Sbjct: 295 ENTEPGTLLTRVQATDADAGLNQ 317
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 550 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRENYSVIIQ 609
Query: 61 ENAEIG 66
EN +G
Sbjct: 610 ENKPVG 615
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN+P F+ +A I E+A
Sbjct: 452 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDA 507
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE+ A YTL D+ P S + +++ DINDN P F A++
Sbjct: 340 IQLEKPLDREQQAVYTLTLKATDQGLPRRLTATSTVVVSVLDINDNPPVFEYREYGATVS 399
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 400 EDILIGT 406
>gi|311250351|ref|XP_003124071.1| PREDICTED: protocadherin gamma-B2-like [Sus scrofa]
Length = 830
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T R LDRE+I Y + DR +P + ITL + D+NDNAP F +
Sbjct: 403 KIVTERALDREEIPEYNITVMATDRGKPPLSSSTTITLHIADVNDNAPVFQQASYEVHVA 462
Query: 61 EN----AEIGSLSTVNATIGVNRCGH 82
EN A I +S + +G N GH
Sbjct: 463 ENNPPGASIAQVSARDPDLGPN--GH 486
>gi|326927571|ref|XP_003209965.1| PREDICTED: hypothetical protein LOC100547026 [Meleagris gallopavo]
Length = 1462
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA- 63
A GLDRE++ YTL D D +L + +TD+NDNAPEF + A++ EN
Sbjct: 236 ASGLDRERVREYTLTMQAADLDGQGLTTTALAVIEITDVNDNAPEFDPKMYEAAVPENEA 295
Query: 64 --EIGSLSTVN 72
E+ L++ +
Sbjct: 296 ELEVARLASTD 306
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K + LDRE I +Y L +H V + +P E + +I +T+TD NDN P+F + S+
Sbjct: 120 MKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEII-VTVTDQNDNKPQFTQEVFRGSVP 178
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ VNAT
Sbjct: 179 EGALPGTSVMQVNAT 193
>gi|297712778|ref|XP_002832907.1| PREDICTED: protocadherin Fat 2-like, partial [Pongo abelii]
Length = 524
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 336 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 395
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 396 ENSPIGS 402
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 1 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCAVAVF 58
Query: 61 ENAEI 65
+N +
Sbjct: 59 DNTTV 63
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 238 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 297
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 298 VILTVSATDEDGPLNSDITYSLVGGNQLGH 327
>gi|292628237|ref|XP_001920772.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 3006
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE +A YTL A D+ P + I +++ DINDNAP F + E
Sbjct: 929 IRTARKLDRENVALYTLKAFAVDKGVPPLKAAVDIQVSVLDINDNAPVFEKDELYIYVEE 988
Query: 62 NAEIGS-LSTVNAT 74
N+ +GS L+ V+AT
Sbjct: 989 NSAVGSTLARVSAT 1002
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E I YTL QD +P ++ + + D+NDNAP F S AS+LEN IG
Sbjct: 518 LDYEMIREYTLRVKAQDGGRPPLINGTGMVVIQVVDVNDNAPMFVSTPFQASVLENVPIG 577
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE Y+ +D P + +++T+ D+NDN P F + + + E+A +G
Sbjct: 624 LDRETTEFYSFGVEARDHGVPTMSSSASVSVTILDVNDNVPTFTQHLYNLKVNEDAVVGT 683
Query: 67 SLSTVNA 73
S+ TV+A
Sbjct: 684 SVLTVSA 690
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + D+ P ++ +T+T++D ND++P F ++ E
Sbjct: 299 ITTLQPLDREVKDTHVFKVTATDKGIPKRSAIAYLTITVSDTNDHSPVFEQNEYRVNVRE 358
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + T+ AT G
Sbjct: 359 NVEVGFEVMTIRATDG 374
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E A YTL +D P + + + + D NDN P+F I ++ E+A + +
Sbjct: 829 IDYEDQASYTLAIIARDNGIPQKSDTTYVEIIVLDANDNVPQFLRDIYQGTVFEDAPVYT 888
Query: 68 ----LSTVNATIGVN-RCGHTFRGKD 88
+S + G N R +TF+G D
Sbjct: 889 SVLQVSASDRDSGSNGRLSYTFQGGD 914
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASNAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S++++ L DIND P F S S+ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSMVSIVLLDINDFVPVFEPSPYSVSVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN + G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKQPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2882
Query: 61 ENAEIGS 67
E E GS
Sbjct: 2883 ELTETGS 2889
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRHVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|47219385|emb|CAG01548.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE + RY + V D+ P I L + DINDNAP F+ I + ++
Sbjct: 371 ELMVSKPLDRELVGRYDITLMVTDKGSPPLAENETIALQILDINDNAPTFSQSIYTIHVV 430
Query: 61 ENAEIGSLST 70
EN + G+L T
Sbjct: 431 ENNQPGALLT 440
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
L+RE+ A + L D PA + I + + DINDNAP F+ + + ++ EN+ G+
Sbjct: 163 LNREEQAVHHLILTAVDGGVPARSGTASIVINVLDINDNAPVFSQPVFAVNVSENSAAGT 222
Query: 68 LS-TVNAT 74
+ T+NAT
Sbjct: 223 VVLTLNAT 230
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVTE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F S++EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSVVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|395817812|ref|XP_003782342.1| PREDICTED: uncharacterized protein LOC100955282 [Otolemur
garnettii]
Length = 1760
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE++A L D P S I + + DINDNAPEFA + A +
Sbjct: 849 ELVLDKELDREEVAELRLTLTALDGGSPQRSGTSQIRIVVLDINDNAPEFAQTLYKAQVP 908
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 909 ENSPVGSL 916
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P +L+ + + DINDNAPEFA + I
Sbjct: 191 ELVLDKALDREEQSELRLTLTAVDGGAPPKSGTALVLIDILDINDNAPEFAQPLYQVQIS 250
Query: 61 ENAEIGS-LSTVNA---TIGVN 78
EN+ + S ++TV+A +G+N
Sbjct: 251 ENSPLESVVATVSARDLDMGIN 272
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T GLDRE A Y + D P + IT+ ++DINDNAP F + + E
Sbjct: 1059 LVTEGGLDRESQAEYNITITATDLGTPRLKTQLNITVLVSDINDNAPAFTQTSYTLFVRE 1118
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 1119 NNSPALHIGTISATDRDSGTN 1139
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LD EKI Y ++ D + +C LI + DINDNAPE V I
Sbjct: 298 EIKLIRKLDFEKIVSYKVDIKASDGKGLSGKCTVLI--QVVDINDNAPELTIVSVLNPIP 355
Query: 61 ENA 63
EN+
Sbjct: 356 ENS 358
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 401 LVTEGALDRELRAEYNITITVTDLGTPRLKTEQNITVLVSDVNDNAPAFTQTSYTLFVRE 460
Query: 62 N 62
N
Sbjct: 461 N 461
>gi|307210686|gb|EFN87109.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 1079
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
+KT + LD E+ +TL +DR +P+ +++ + + D+N+N AP F + SAS+
Sbjct: 962 VKTTQTLDFEERQVHTLTIVARDRGEPSLSSETMVIIEVVDVNENLHAPLFDDFVASASV 1021
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN +G+L T + G +R G++ RG D
Sbjct: 1022 FENQPVGTLVTTVRARDADPPGGDSRIGYSIRGGD 1056
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ + Y LN V D +P ++ +T+ D+NDNAP+F + S I
Sbjct: 747 ELEVIGYLDRERESEYYLNISVYDLGKPQKSASKMLPVTVLDVNDNAPKFDKSLASFRIS 806
Query: 61 ENA 63
E A
Sbjct: 807 ETA 809
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 8 LDRE-KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L DR P + + LTD+NDNAP F+ I + E A I
Sbjct: 277 LDRETALQGYNLTLRATDRGVPQRYSYKFVPVHLTDLNDNAPVFSREIYEVKVPETAPIN 336
Query: 67 S 67
+
Sbjct: 337 T 337
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 8 LDREKIARYTLNAHVQD-----RDQPAWECVSLITLTLTDINDNAPEFA 51
LDRE+ Y L +D D P +L+ +T+ D+NDNAP FA
Sbjct: 857 LDRERQEIYELRIRARDNGGKSSDDPPLYSDALVRVTVDDVNDNAPTFA 905
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI +Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKIPQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAYVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QPA + + + + DINDN P F + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQPLYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A Y+L D P + I ++L D+NDN+P F + A I
Sbjct: 640 KLSTIASLDREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDVNDNSPVFYPIQYFAHIQ 699
Query: 61 ENAEIGS-LSTVNAT---IGVN 78
EN GS ++TV+AT +G+N
Sbjct: 700 ENEPGGSYITTVSATDPDLGLN 721
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2315 ELRVIQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDINDNVPTFASKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPIFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + LT+ D+NDN+P F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELPEIGSKVTQVSAT 2897
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYSLTVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3468 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHIPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVIN-SASILEN 62
A GLDRE ++ LN +D+ P + L+ +TL D+ND P F+ S++EN
Sbjct: 537 AGGLDRELASQIVLNISARDQGVHPKFSYAQLV-VTLLDVNDEKPVFSQPEGYDVSVVEN 595
Query: 63 AEIGS 67
A G+
Sbjct: 596 APTGT 600
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA +DRE+ + Y L +++ +T+ D+NDN+P F + S +++E
Sbjct: 848 LTTASVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAVESVNVVE 904
Query: 62 NAEIG 66
N + G
Sbjct: 905 NWQAG 909
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2673 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2731
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2732 ENSPLGYTVTRVTTSDEDIGIN 2753
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2052 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2111
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2112 ENTLTGT 2118
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2262 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2321
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2322 EDAPTGT 2328
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2569 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2628
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2629 ENLSPRKILTVSA 2641
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2775 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2831
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2832 ELTEIGS 2838
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2158 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2217
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2218 N--LGTL 2222
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3417 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML--TVSEGEVMENKRPGT 3474
Query: 68 L 68
L
Sbjct: 3475 L 3475
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 1947 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2000
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2889 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2948
Query: 67 S 67
+
Sbjct: 2949 T 2949
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3515 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3566
>gi|297674526|ref|XP_002815275.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Pongo abelii]
Length = 2916
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1429 ELSTTRALDREQVSNFTLAVLCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1488
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1489 EDAEVGTVVLVLSAVDKDEGLN 1510
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D +P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2168 LDREASASHELVILASDSGRPPLSSTAVISIQVVDVNDNPPNFSSLSYHTHVKESTPLGS 2227
Query: 68 LSTV 71
TV
Sbjct: 2228 HITV 2231
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1325 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1384
Query: 61 ENAEIGSLSTVNAT 74
EN E + TV A+
Sbjct: 1385 ENQEPEVVYTVLAS 1398
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1221 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1280
Query: 62 NAEIGSLST 70
N + G T
Sbjct: 1281 NQKPGEFVT 1289
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1850 LDYELTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF 1892
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ YTL+ D+ P I L +TDINDNAPEF + A+++E A+ G+
Sbjct: 422 LDRETISNYTLSVVATDKGTPPLHATKSIFLRVTDINDNAPEFEHSVYHANVMEVADPGT 481
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR +P + + IT+ + D NDNAP F A+I E+
Sbjct: 1863 SARSLDREQHSRYTLQVQASDRGKPNSLQGQCNITILVEDQNDNAPRFELPKYIANIAED 1922
Query: 63 AEIGS----LSTVNATIGVN 78
A IGS + +A +G+N
Sbjct: 1923 AAIGSSVVRIKANDADLGIN 1942
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E A+ LN P + + + + D+NDNAPEF + S+ E
Sbjct: 847 IRIAHPLDHEAKAQVLLNIQATSSGDPPVYGHTQVKIEVEDVNDNAPEFETTSVRISVPE 906
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 907 NAELGT 912
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + + +T+ D+NDN P F A++
Sbjct: 197 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 256
Query: 61 ENAEIGS 67
EN+ +G+
Sbjct: 257 ENSTVGT 263
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ RY L D PA + + I + + D NDN P+F I EN GS
Sbjct: 1079 LDREQRDRYQLTVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKRSNYEFRIEENMRRGS 1138
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE+ Y L +D+ P + + +TD+NDNAPE A
Sbjct: 1175 EITTKEPLDREQRELYDLLVEARDQGSPQRSARVPVRIHVTDVNDNAPEIA 1225
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D QP E + ++ + + D+NDN P F S + E
Sbjct: 1285 IRTRTVLDHEERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1344
Query: 62 NAEIG 66
+A +G
Sbjct: 1345 DASVG 1349
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 18 LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNA 73
L +D QPA + + +T+ D+NDN P F + +I EN IG +S +
Sbjct: 539 LTVIARDGGQPALSSSATVLVTIHDVNDNEPIFDQSFYNVTIAENEPIGRCILKVSASDP 598
Query: 74 TIGVN 78
GVN
Sbjct: 599 DCGVN 603
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT LDRE Y L D P + I + + D+NDN P F N S+ E
Sbjct: 2351 VKTNIVLDREIRDVYQLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPN-NLVSVSE 2409
Query: 62 NAEIGSLST 70
E+GS+ T
Sbjct: 2410 ATELGSVIT 2418
>gi|432933149|ref|XP_004081829.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 965
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LDRE I Y L +D QP ++ V T+++TD NDN P F+ + S+LEN
Sbjct: 414 TTKTLDRESIPEYNLTVVAEDLGQPPFKTVRQYTISVTDENDNPPLFSKPLYEISVLENN 473
Query: 64 EIGS-LSTVNAT 74
GS L+TV A+
Sbjct: 474 IPGSFLTTVVAS 485
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE YT+ D +P + + + D NDN+P F + +
Sbjct: 192 ELVLVRELDRELEDSYTIQVTASDGGEPPKSGSMTVHIRVLDFNDNSPVFEHSSLNVELN 251
Query: 61 ENAEIG 66
E+A +G
Sbjct: 252 EDAPVG 257
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ RY LN + D+ P L+T+ + D NDN P+F SA +LENA IG
Sbjct: 783 LDRERLDRYFLNITIYDQGIPQMSSWRLLTVIIEDTNDNDPQFYQDSFSALVLENAAIGL 842
Query: 67 ---SLSTVNATIGVN 78
S+S + +G N
Sbjct: 843 EVISISAFDRDMGQN 857
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE ++RY+L+ D PA + + L+D+NDN P F ++A I
Sbjct: 3416 LKVNKRLDRELVSRYSLSVQAFDSGSPAMSSTVTLNIDLSDVNDNPPAFTPPNSTAIIQL 3475
Query: 62 NAEIGS 67
N GS
Sbjct: 3476 NQPAGS 3481
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL++A +DRE Y L A Q D C I+L + D+NDNAP F+S AS+
Sbjct: 3101 ELRSATVMDRETTPSYKLIA--QATDGGGLFCRCDISLKVLDVNDNAPAFSSPHYLASVY 3158
Query: 61 ENAEIGSLST 70
ENA +L T
Sbjct: 3159 ENAAPKALLT 3168
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E Y L D P +++T+ L D+NDNAP F+ I + + E+A
Sbjct: 3314 ADDLDFEVCKDYYLTLEAWDGGNPPLSSATVVTIELMDVNDNAPTFSQDIYNVLVSEDAS 3373
Query: 65 IGSLST 70
+G + T
Sbjct: 3374 VGQMVT 3379
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T DRE+ Y L V ++ + + + D+NDNAPEF ++ A++
Sbjct: 2039 LTTGVPFDREERDSYELVVEVSREEEILKVARVTVQVQVEDVNDNAPEFVNLPYYAAVQV 2098
Query: 62 NAE----IGSLSTVNATIGVN 78
+AE I +S V+ GVN
Sbjct: 2099 DAEPESAIFKVSAVDRDAGVN 2119
>gi|380014510|ref|XP_003691272.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-like wing polarity
protein stan-like [Apis florea]
Length = 3167
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE + +Y L A DR P+ V+ +T+ + D+ND+ P F + I E
Sbjct: 968 IRTAKPLDRESVGKYVLKAVAMDRGSPSLSTVAPVTIKIEDVNDSPPXFENDKIILYIAE 1027
Query: 62 NAEIGS 67
N+ +GS
Sbjct: 1028 NSPVGS 1033
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE + Y L +D P + + +++TD+NDNAP F + SI E
Sbjct: 864 ITTTRPLDRELVPAYLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPE 923
Query: 62 NAEIG-SLSTVNAT 74
+ +G S+ V+AT
Sbjct: 924 DVLVGTSVLRVSAT 937
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ +RY D + + + + LT+TD+NDN P F + + E
Sbjct: 653 LYTTKQLDREQCSRYQFTVIAADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVTSVTAT 726
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN +G
Sbjct: 601 ENVPVG 606
>gi|196006169|ref|XP_002112951.1| hypothetical protein TRIADDRAFT_25152 [Trichoplax adhaerens]
gi|190584992|gb|EDV25061.1| hypothetical protein TRIADDRAFT_25152, partial [Trichoplax adhaerens]
Length = 2391
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T + L+RE+IA+Y L +D P+ + +T+ +TD ND+ P+F SASI
Sbjct: 1338 ELSTTKSLNRERIAQYQLTVMAKDNGSPSLNSTTKVTVIVTDQNDHDPKFNQTRYSASIA 1397
Query: 61 ENAEIG-SLSTVNAT 74
E+ I +++TV AT
Sbjct: 1398 ESVAINTTVTTVYAT 1412
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E+ +Y LN D+ P +T+ + D+ND+AP F I +ASI E
Sbjct: 1130 LSIASKLDYERKKQYALNISATDKGIPRRSSYMKLTVYVVDVNDHAPTFNKTIYTASINE 1189
Query: 62 NAEIGSL 68
N + +
Sbjct: 1190 NVPLNTF 1196
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LDRE+ +Y L D P+ + + +T+ DINDN P+F++ ++ I E
Sbjct: 1235 ITTAKYLDREQHPQYILTVDAHDNALPSKYSSTQVVITVLDINDNPPQFSNQSHTFYIPE 1294
Query: 62 N 62
N
Sbjct: 1295 N 1295
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + +DRE +++ TL + +D P + + + DINDN P+F + + E
Sbjct: 385 ITTQKAIDRETVSQLTLTINAKDSGLPPLVGQTQAQVQVNDINDNYPQFDKSNQAIQLFE 444
Query: 62 NAEIGSL 68
N IG++
Sbjct: 445 NTTIGTV 451
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE + TLN DR Q + L+T+ + D NDNAP+F S +I E +
Sbjct: 493 QSLDRELVNIITLNITATDRSQDKFLSWMLLTIQILDNNDNAPQFKQSHVSVNISEASTA 552
Query: 66 GSL 68
G+L
Sbjct: 553 GTL 555
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E + YTL QD P + + + + + D ND++P+F + + + + I
Sbjct: 598 KSLDYENRSSYTLFVKTQDAGHPPRQAILTLDIHVLDENDHSPQFQQISYNFGVSQGQPI 657
Query: 66 GS 67
G+
Sbjct: 658 GT 659
>gi|397504069|ref|XP_003822631.1| PREDICTED: protocadherin-23-like [Pan paniscus]
Length = 2770
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1283 ELSTTRALDREQISNFTLAILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1342
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1343 EDAEVGTVVLVLSAVDKDEGLN 1364
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1179 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1238
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCY 92
EN E + TV A+ G NR H G C+
Sbjct: 1239 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECF 1275
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2022 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2081
Query: 68 LSTV 71
TV
Sbjct: 2082 HITV 2085
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1075 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1134
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1135 NQNPGEFVT 1143
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1704 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1746
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 644 ELINWVALDREHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 693
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y N V+ D C + I LTL D+NDNAPEF + + ++
Sbjct: 3080 ELRTLALLDREEQAVY--NLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVF 3137
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3138 ENTEPGTPLTRVQATDADTGLNR 3160
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3393 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3452
Query: 61 ENAEIG 66
EN +G
Sbjct: 3453 ENKPVG 3458
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1516 LYTAEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYE 1575
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1576 SAAVGSV 1582
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE + +YTLN V D P L+ +T+ D NDNAPEF + E
Sbjct: 775 LKVLSPLDREVMDKYTLNITVYDLGIPQKAAWRLLDVTVLDANDNAPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 835 DKEVNS 840
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S SA I E
Sbjct: 1621 IKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNASPKFTSKEYSAEISE 1680
Query: 62 NAEIGSL 68
IGS
Sbjct: 1681 AIRIGSF 1687
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAAL 3352
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2871 ITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVS 2930
Query: 61 ENAEIGS----LSTVNA-TIGVNR 79
E+ G LST +A T +NR
Sbjct: 2931 EDDPPGGVIAILSTTDADTEEINR 2954
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P + +++ DINDN P F AS+
Sbjct: 3183 IQLEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVS 3242
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3243 EDIVIGT 3249
>gi|292620495|ref|XP_001340569.3| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 802
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P ITL L D+NDN P+F + ++
Sbjct: 407 ELLVSEPLDREKLPEYDITITVTDRGNPPLFDNETITLELLDVNDNVPQFPQTFYTIPVM 466
Query: 61 ENAEIG-SLSTVNA 73
EN G SLS++ A
Sbjct: 467 ENNAPGASLSSITA 480
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D P+ + I + + D NDNAP+F + +
Sbjct: 194 DLVLKKALDREEQAVHNLILTAVDGGVPSRSGTANIIVQVLDTNDNAPQFDKDSYTVHLS 253
Query: 61 ENAEIGSLST-VNAT 74
ENA IGSL +NAT
Sbjct: 254 ENAPIGSLVVKLNAT 268
>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
Length = 4958
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+IA Y L +D QP+ + + +T+ D NDN P+F + S ++
Sbjct: 2734 EISTNAKLDREEIASYELIIEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLF-SVNVT 2792
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 2793 ENAEIGTF 2800
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR QP L+ +T+ D+NDN P F ++ E
Sbjct: 164 LETTGKLDREQVEFYSLNVCARDRGQPPRLGYLLVNVTVLDVNDNPPIFQQSDYVVALNE 223
Query: 62 NAEIGS-LSTVNAT 74
+A IG+ + TV AT
Sbjct: 224 SAPIGTKVLTVRAT 237
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE+I +Y L D+ P + + + + D+ND+ P F SA + E + IG
Sbjct: 397 GLDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIG 456
Query: 67 ----SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 457 SFVASISATDADSGLN 472
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE I Y + +D+ P + +TLTL D+NDN+P F ++
Sbjct: 604 QLTTKVHLDRETIGEYRILVIAKDQGTPPQSSTATVTLTLKDVNDNSPVFYPWRYLMAVP 663
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 664 EDAPPGT 670
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE + YTL +DR +P + +T+T+ D NDN+P F SA++ E
Sbjct: 2102 LRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTTVTVTVLDENDNSPVFDPRQYSATVAE 2161
Query: 62 NAEIGS 67
NA IG+
Sbjct: 2162 NASIGA 2167
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
R LDRE +A YTL D P ++ + + D+ND+ PEF A++ EN+
Sbjct: 2322 RPLDRESVAEYTLTLVAMDTGSPPLTGSGIVRIVVLDVNDHIPEFTRQEYRATVTENS 2379
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA V + + +TD NDNAP + I +A++
Sbjct: 2630 EVLVASGFDYETAPFYEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPVMEAAIYNATVP 2689
Query: 61 E 61
E
Sbjct: 2690 E 2690
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE I Y L D P + + + L DINDN P F +
Sbjct: 3438 DIETAKQLDRETIPVYDLTIGAIDTGSPPQTGTAAVHIELMDINDNGPIFDPPEVIGYVN 3497
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 3498 ENEPAGTIVMTLSATDPDLPPNGAPFTYK 3526
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDNAP F + ++ I+EN IG+
Sbjct: 1899 LDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEAGPHAVDIVENTTIGT 1958
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE +Y L D Q +T+ +TD NDNAP F + S +
Sbjct: 1789 QLTLAEALDRETREKYVLKVRADDGLQ---HTDIALTIQVTDTNDNAPTFQNTAYSFDVP 1845
Query: 61 ENAEIGS 67
EN GS
Sbjct: 1846 ENMPRGS 1852
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ LD E++ +YTLN D P V+ + + + D NDN P F + + I E
Sbjct: 1350 KPLDYEELEKYTLNVTCSDGGHPRLSSVTTLIVEVIDANDNPPVFPNTAIARQIRE 1405
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW+ + +T+T+ D NDN PEF
Sbjct: 2844 LDREEQDEYLLKLVAADG---AWQAATALTITIQDQNDNPPEF 2883
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
E+ T LDRE+ + Y L QD +P V+L T+ + D+NDNAP F+S
Sbjct: 2421 EVFTVVPLDREQTSVYHLTLVAQDSSPTEPQASAVNL-TIFVKDVNDNAPRFSS 2473
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
L T + LDRE+ Y L D P +S +T+ L D+ND +PEF S S
Sbjct: 1997 LFTRKLLDREQKPLYNLVLSATDSPSPPGLPLSSTVQVTVVLLDVNDMSPEFISP-TKIS 2055
Query: 59 ILENAEIGSLSTVNATIGVNR 79
I+ENA S + V A V+R
Sbjct: 2056 IIENAP--SNTVVMAIKAVDR 2074
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC----VSLITLTLTDINDNAPEFASVINSA 57
++ A+ L+ E+ +RY L +D E + +T+T+ DINDNAP F A
Sbjct: 2207 IRVAKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVLDINDNAPVFLDSPYLA 2266
Query: 58 SILEN 62
++EN
Sbjct: 2267 HVMEN 2271
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
++KTA+ LDRE ++ R+ L V QP + + + + DINDN PEF + S
Sbjct: 52 KIKTAKVLDREALSSDRFDL---VVLSSQPTYPIE--VRILVLDINDNDPEFPESSIAVS 106
Query: 59 ILENAEIGS 67
E+A +G+
Sbjct: 107 FSESAVVGT 115
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K AR LDREK + YTL D PA + I + ++DINDN P F+ S I
Sbjct: 3389 EVKVARLLDREKTSGYTLTVLASDNGGPARSSSATINVDVSDINDNPPIFSQANYSIIIQ 3448
Query: 61 ENAEIGSLSTVNATIGVNRCGH 82
EN IG+ S + T+ H
Sbjct: 3449 ENQPIGA-SVLQLTVSDRDASH 3469
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E + ++TL V+D+D P + + + + D NDNAP F+ + E
Sbjct: 1511 LYTAERLDHETMHQHTLTVMVRDQDIPVKRNLVRVIVNVQDTNDNAPWFSGAPYVGRVFE 1570
Query: 62 NAEIGS 67
+A GS
Sbjct: 1571 SAATGS 1576
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L D P+ ++ + + LTD+NDN+P F I SA I E+AE+G
Sbjct: 3291 LDYETAHEFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQDIYSAVISEDAELG 3349
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASILENAE 64
R LDRE + YTL A DR P +L+++++ DINDN P F +A++ E+
Sbjct: 3183 RPLDRELQSLYTLRAQATDRGSPRHLSSQTLLSVSILDINDNPPVFERREYTATVAEDIP 3242
Query: 65 IGS 67
+G+
Sbjct: 3243 VGT 3245
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE YTLN V D P L+ + + D NDN P+F S I E
Sbjct: 772 LKVFAPLDRETTDHYTLNITVYDL-VPQKSSSRLLDVKILDANDNGPQFLKETYSVEISE 830
Query: 62 NAEIGS 67
++ +G+
Sbjct: 831 SSTVGT 836
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ + + V+ D C + + +T+ D+NDN P+F + + ++
Sbjct: 3076 ELKTLLPLDREEEEVHKMK--VRALDGGGRFCEAEVEITVEDVNDNPPQFTTDPYTFTVF 3133
Query: 61 ENAEIGS 67
EN EI +
Sbjct: 3134 ENTEINT 3140
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA L + + +Y L D+ + V+ + + + D+N+N PEF AS+ E
Sbjct: 418 ITTAAPLHADSVNKYELEVVTSDK-----KAVTKVIIDVIDVNNNGPEFKQTSYKASLDE 472
Query: 62 NAEIG-SLSTVNAT 74
N G S+ TV AT
Sbjct: 473 NMPTGTSVLTVKAT 486
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D+ PA + + + D NDN+P+F
Sbjct: 1196 TSRKLDREQQDEHILEITVSDQGVPAKSTTVRVIVKVLDENDNSPQF 1242
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E + Y L + DR + + + D+NDNAP+ + + S++E
Sbjct: 1088 IRTQELLDHETVPHYWLTVYATDRGVVPLSSFVEVYIEVQDVNDNAPQTSEPVYYPSVME 1147
Query: 62 NA 63
++
Sbjct: 1148 SS 1149
>gi|449267271|gb|EMC78237.1| Protocadherin Fat 4, partial [Columba livia]
Length = 2772
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE++A Y + +D PA + + L D+NDNAP F I + + E
Sbjct: 209 LVTSEALDREQVAEYNVTVRARDEGSPALSVSKTLFVRLLDVNDNAPTFTQTIYTMVLSE 268
Query: 62 NAEIG-SLSTVNAT 74
N G SL +NAT
Sbjct: 269 NEPAGTSLGRLNAT 282
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ A+Y L+ D P T+ ++D+NDNAP F + +
Sbjct: 2139 ELVTVSTLDREETAQYILSVTAADAGSPPLTTTQTFTVDVSDVNDNAPVFNQTLYVMYVR 2198
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN +G++S +A G N
Sbjct: 2199 ENNVPTVLVGAVSAADADTGSN 2220
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ A+Y L+ D P T+ ++D+NDNAP F + +
Sbjct: 1708 ELVTMSELDREETAQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVR 1767
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN +G++S +A G N
Sbjct: 1768 ENNVPTVLVGAISAADADTGSN 1789
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ A+Y L+ D P T+ ++D+NDNAP F +
Sbjct: 741 ELVTVSMLDREETAQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYVMYVH 800
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN+ +G++S +A G N
Sbjct: 801 ENSVPTVLVGAVSAADADTGSN 822
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ A+Y L D P T+ ++D+NDN+P F+ + +
Sbjct: 2565 ELVTVSTLDREETAQYILIVTATDAGSPPLTTTQTFTVDISDVNDNSPVFSQTSYTMYVR 2624
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN +G++S +A G N
Sbjct: 2625 ENNVPTVLVGAVSAADADTGSN 2646
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ A+Y L+ D P T+ ++D+NDNAP F +
Sbjct: 1277 ELVTVITLDREETAQYILSVTAADVGSPPLTTTQTFTVDISDVNDNAPVFNQTSYVMYVH 1336
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN+ +G++S +A G N
Sbjct: 1337 ENSVPTVLVGAVSAADADTGSN 1358
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 1 ELKTARGLDREKIARYTLNAH----VQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
EL T LDRE+ A+Y L D P + I + + D+NDN+P FA +
Sbjct: 527 ELVTVSELDREETAQYILTPENGLTAMDGGSPPRSGTTQIRIIVLDVNDNSPIFAQDLYV 586
Query: 57 ASILENAEIGSL 68
+LE+A GS+
Sbjct: 587 GQVLESAPEGSV 598
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 9 DREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
D E+++ + D + PA W C +++ L + D+NDNAP FA SA + EN G+
Sbjct: 2249 DVEELSDNNVTVRAADGESPALWSC-TVLWLRVLDVNDNAPVFAEARYSARVPENNAAGA 2307
Query: 68 L 68
L
Sbjct: 2308 L 2308
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + D P + I + + D+NDN+P FA + +L
Sbjct: 1067 ELVLKKPLDREEQSEMGFSLIAVDGGSPPRSGTTQIRIIVLDVNDNSPIFAQDLYVGQVL 1126
Query: 61 ENAEIGSL 68
ENA GS+
Sbjct: 1127 ENAPEGSV 1134
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E RY L+ VQ D + + + + D+NDNAPE S +
Sbjct: 2462 EIKITKPLDFEAAERYELS--VQATDGGGLSAICKVLVEVVDVNDNAPELVVSTFSNPLP 2519
Query: 61 ENAEIGSLSTV 71
EN G+++ V
Sbjct: 2520 ENTLPGTVAAV 2530
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+ A + D P +LI + + D NDN P F + +LEN+
Sbjct: 3 RALDREQQAEVAFSVTAVDGGSPPRSGTALIRVVVLDTNDNIPVFTRSLYKVRVLENSSQ 62
Query: 66 GSL 68
+L
Sbjct: 63 DTL 65
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ R + + L V+D QP + I + + D+NDN P F IL
Sbjct: 1498 EVRLRRPVTERDPVKQKLVVLVRDNGQPPLSGTTQIHIIVLDVNDNTPVFTQDRYVGRIL 1557
Query: 61 ENAEIGSL 68
ENA GS+
Sbjct: 1558 ENAPEGSV 1565
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E +Y L+ V+ D + + + + D+NDNAPE S+ +
Sbjct: 424 EIKLTKPLDFEAAEKYELS--VRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLP 481
Query: 61 ENAEIGSLSTVNA 73
ENA G++ + A
Sbjct: 482 ENALPGAVVALFA 494
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y N V+ D C + I LTL D+NDNAPEF + + ++
Sbjct: 3082 ELRTLALLDREEQAVY--NLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVF 3139
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3140 ENTEPGTPLTRVQATDADTGLNR 3162
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3395 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3454
Query: 61 ENAEIG 66
EN +G
Sbjct: 3455 ENKPVG 3460
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1518 LYTAEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYE 1577
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1578 SAAVGSV 1584
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE + +YTLN V D P L+ +T+ D NDNAPEF + E
Sbjct: 775 LKVLSPLDREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 835 DKEVNS 840
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + + +T ++ +P+F S SA I E
Sbjct: 1623 IKTARELDRSHQVDYDLMVKATDKGDPPMSEMTSVRIAVTVADNASPKFTSKEYSAEISE 1682
Query: 62 NAEIGSL 68
IGS
Sbjct: 1683 AIRIGSF 1689
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1094 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIME 1153
Query: 62 NA 63
N+
Sbjct: 1154 NS 1155
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3297 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAAL 3354
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2873 ITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVS 2932
Query: 61 ENAEIGS----LSTVNA-TIGVNR 79
E+ G LST +A T +NR
Sbjct: 2933 EDDPPGGVIAILSTTDADTEEINR 2956
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P + +++ DINDN P F AS+
Sbjct: 3185 IQLEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVS 3244
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3245 EDIVIGT 3251
>gi|196004380|ref|XP_002112057.1| hypothetical protein TRIADDRAFT_84 [Trichoplax adhaerens]
gi|190585956|gb|EDV26024.1| hypothetical protein TRIADDRAFT_84, partial [Trichoplax adhaerens]
Length = 2004
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT R LDRE +A YT+ DR QP + + +TD ND++P F + + SA+I E
Sbjct: 1740 IKTQRQLDREAVANYTVIVRATDRGQPPLSGQVNVLIQVTDSNDHSPHFKTSMFSANISE 1799
Query: 62 NAEIG 66
+A +G
Sbjct: 1800 HAPLG 1804
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARY-TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+++TA DRE RY T+ D +P S + + + D+ND+ P FA +A++
Sbjct: 1425 QIRTAVVFDRESSLRYYTVIVKATDNGKPPQSSTSSVRVQILDVNDSPPRFAEQYYTATV 1484
Query: 60 LENAEIGS-LSTVNAT 74
EN E G ++TV AT
Sbjct: 1485 AENVETGYVVTTVTAT 1500
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LD E +Y L +D P+ + + + D++DN P+F V+ + S+ E
Sbjct: 65 VRTTRILDYEFTTQYWLTIQARDGGTPSRSTICRTIVQIVDVDDNTPQFEQVVYNTSLPE 124
Query: 62 NAEIGSLSTVNATIGVN 78
+ S TV I ++
Sbjct: 125 SLPPNSFVTVVRAIDID 141
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1304 SARPLDREQNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1363
Query: 63 AEIGS----LSTVNATIGVN 78
A + + +S V+A +GVN
Sbjct: 1364 APLSTSVVQISAVDADLGVN 1383
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 300 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 358
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 359 SAELGA 364
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 718 IRTRVVLDHEERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 777
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 778 DAALGHVVGSISPIERPADVVRNSVEKSFEDLR 810
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 527 LDREARDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 586
Query: 68 LSTV 71
+ V
Sbjct: 587 VVGV 590
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSYYVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGTPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQTLYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE ++ L D PA I++ + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEQFVLMITAIDGGSPALTGTGTISVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFGRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 N 62
N
Sbjct: 2271 N 2271
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDVRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|344265576|ref|XP_003404859.1| PREDICTED: protocadherin gamma-A3-like [Loxodonta africana]
Length = 843
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + D P + ITL +TDINDN P FA SA I E
Sbjct: 404 LVTARSLDREQVSEYNVTLRATDGGTPPLSTETHITLRVTDINDNPPAFAHASYSAYIRE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGT 469
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREEQEVHQLTLSASDGGDPVRSGNLYIQVIVLDANDNPPAFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L VNAT
Sbjct: 253 ENVPVGTHLLRVNAT 267
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKISYYELTVKSSDKGSPSQSTSVKVIISVLDENDNAPRFSQIF-SAYVS 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGIN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGT 2171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y L D P + ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2622 QVSISQPLDFEKIQKYIVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2682 ENLSPRKILTVSAT 2695
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 3463 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TVSEGEVL 3520
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3521 ENKRPGTL 3528
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKALKALDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2885 ELTELGSRVTQVSAT 2899
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQIVATDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE I Y L DR + +TL D+ND P F S ++ E
Sbjct: 2211 ITVAKSLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGAL 2275
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE ++Y+L D Q I +T++D+ND+ P F+ + S I
Sbjct: 1795 DLIATKRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPRFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S +
Sbjct: 847 QLTTASVIDREEQSFYQLRVVASGG---AVTGDAVVNITVKDLNDNAPHFLQAVESIDAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3619
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like [Bombus
impatiens]
Length = 3163
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A Y L A DR P+ V +T+ + D+ND+ P F + I E
Sbjct: 967 IRTAKPLDRESVAMYILKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAE 1026
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1027 NSPIGS 1032
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE + Y L +D P + +++TD+NDNAP F S SI E
Sbjct: 863 ITTTRTLDRELVPGYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFESPQYQGSIPE 922
Query: 62 NAEIG-SLSTVNAT 74
+ G S+ V+AT
Sbjct: 923 DVAGGTSVLRVSAT 936
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY D + + + LT+TD+NDN P F A + E
Sbjct: 653 IYTTKQLDREQCSRYQFTVIAADSGEVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE 712
Query: 62 NAEIGS-LSTVNAT 74
+ G+ +++V AT
Sbjct: 713 DDPPGTPVTSVTAT 726
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E Y + QD PA + + + + D+NDNAP F + S+
Sbjct: 541 DVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVS 600
Query: 61 ENAEIG 66
EN IG
Sbjct: 601 ENVPIG 606
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKVSQYILTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + +GVN
Sbjct: 2783 ENSPLGYTVTRVTTSDEDVGVN 2804
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREATPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPIFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L D+NDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE ++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREDVSNYTLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 2620 QVSISRPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPQKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFTQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENVP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSLSTVNATI 75
N L T+ +TI
Sbjct: 2271 N-----LGTLPSTI 2279
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3468 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML--TISEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQLPASRYTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE Y + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDLYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELTEIGSKVTQVSAT 2897
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V + V + +T+ D+NDN+P F + S +++
Sbjct: 847 QLTTASVVDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR P+ + +T+ + D NDNAP+F + +
Sbjct: 2934 KYQNVSGFSNVNINRHSFIVTSSDRGNPSLLSETTVTVNIVDSNDNAPQFLKLKYFTPVT 2993
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 2994 KNVKVGT 3000
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|334311387|ref|XP_001377967.2| PREDICTED: protocadherin gamma-C5-like [Monodelphis domestica]
Length = 940
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE A YT+ +D P + I L ++D+NDNAP F+ + SA I E
Sbjct: 406 LLTSERLDREATAHYTVELLARDTGSPPLQTSLTILLNISDVNDNAPSFSQQVYSAYISE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRPPGSL 472
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D PA + I++T+ DINDNAP F + ++
Sbjct: 193 ELVLERPLDREEQAEHQLVLTAVDGGTPALSGTARISITVLDINDNAPAFEPSLLRVTVP 252
Query: 61 ENAEIGSLST-VNAT 74
EN G L +NAT
Sbjct: 253 ENTPQGKLLVRLNAT 267
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSAS 58
E++ +D E+ + Y L+ +D+ QP+ E S++ + + D NDNAPE S++N
Sbjct: 301 EIRVLGPVDFEESSFYELHVRARDQGQPSMEGHSVVQIEVEDANDNAPEVLLTSLVN--P 358
Query: 59 ILENAEIGSL----STVNATIGVNR 79
+ E+ +G++ + + GVNR
Sbjct: 359 VPEDTPVGTVVGLFNVRDRDSGVNR 383
>gi|326436675|gb|EGD82245.1| FAT3 protein [Salpingoeca sp. ATCC 50818]
Length = 7553
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL---ITLTLTDINDNAPEFASVINSA 57
EL GLDRE+ A Y+ V D+ A +S +T+ LTDINDNAP F + +
Sbjct: 5933 ELSLPSGLDREQSASYSFTVTVTDQPVDAGAALSASVAVTVQLTDINDNAPSFGAASITF 5992
Query: 58 SILENAE----IGSLSTVNATIGVN 78
S+ EN +G L+ +A GVN
Sbjct: 5993 SVAENGTGSDLVGVLTVTDADAGVN 6017
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 9 DREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
DRE + Y L A V D + + + +T+TD NDN P F S SA + ENA +GS+
Sbjct: 3616 DRESVPSYNLTATVTD---GTFNATAFVVITITDENDNLPFFVSAA-SAEVPENAPMGSV 3671
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T R LDRE Y + D P+ +T+ + DINDN P F ++
Sbjct: 6040 ELRTQRVLDRETQDEYQIVVVAADAGTPSLSSTVTVTIEVEDINDNRPLFTRSSYRGAVD 6099
Query: 61 ENAEIGS----LSTVNATIGVN 78
+ G+ + +A IGVN
Sbjct: 6100 PGTDAGATVVYIGAEDADIGVN 6121
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE----NA 63
LDRE + ++ D P + LTL D+NDN P+FAS A + E
Sbjct: 478 LDRESQSTVSVTFVASDTGTPPLSTQITLVLTLRDVNDNRPKFASKAYEAELSELKQPGY 537
Query: 64 EIGSLSTVNATIGVNRCGH 82
EI +S +A +G N H
Sbjct: 538 EIIQVSATDADLGSNAVVH 556
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A G D E++ TL +D P+ ++ T+ + DINDN P F+ I E
Sbjct: 1439 IANATGFDYEQLHELTLVIVARDHGTPSRMQMATTTININDINDNRPIFSQDTYYVDIFE 1498
Query: 62 NAEIGSL 68
N SL
Sbjct: 1499 NKTANSL 1505
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + I++ + D NDN P F AS+ EN
Sbjct: 1911 SARSLDREQHSRYTLQLQASDRGQPITHQGHCNISVFVEDQNDNEPRFELAKYMASVAEN 1970
Query: 63 AEIGS----LSTVNATIGVN 78
A IGS + +A +GVN
Sbjct: 1971 AAIGSSVLRIKASDADLGVN 1990
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + YTL+ D+ P I L +TD+NDNAPEF + A+++E A+ G+
Sbjct: 450 LDREATSNYTLSVIATDKGTPPLHASKSIFLRVTDVNDNAPEFELDVYHANVMEVADPGT 509
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E A+ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 872 IRIAHPLDHEAKAQVLLNIQATSGEPPVYGHTQ-VNIEVEDVNDNAPEFETSMVRISVPE 930
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 931 NAELGT 936
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + + +T+ D+NDN P F A++
Sbjct: 225 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 284
Query: 61 ENAEIGS 67
ENA +GS
Sbjct: 285 ENATVGS 291
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + +T+TD+NDNAPE A
Sbjct: 1211 EISTREPLDRELRELYDLVVEARDQGTPTRSARAPVRVTVTDVNDNAPEIA 1261
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---- 62
LDRE RY L D PA + + + + D NDN P+F + I EN
Sbjct: 1114 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLRESYAFKIEENLRRG 1173
Query: 63 AEIGSLSTVNATIGVN 78
A +G +S +A +G N
Sbjct: 1174 AVVGVVSATDADLGEN 1189
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 25/96 (26%)
Query: 4 TARG-LDREKIARYTLNAHVQD------------RDQPAWEC-----------VSLITLT 39
T RG DRE +RYTL +V+D R Q + E V+ + ++
Sbjct: 1783 TTRGQFDRELQSRYTLPVYVRDANRMSATPTSAVRKQRSSESNAELMSGQHFDVATLIIS 1842
Query: 40 LTDINDNAPEF-ASVINSASILENAEIGSLSTVNAT 74
+ D+NDNAPEF S+ EN+E + TV A+
Sbjct: 1843 IGDVNDNAPEFRPGSCYGLSVPENSETAIIHTVVAS 1878
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKISYYELTVKSSDKGSPSQSTSVKVIISVLDENDNAPRFSQIF-SAYVS 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGT 2171
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y L D P + ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS + +I
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYIVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2680 ENLSPRKILTVSAT 2693
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 3461 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TVSEGEVL 3518
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3519 ENKRPGTL 3526
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKALKALDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2883 ELTELGSRVTQVSAT 2897
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQIVATDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE I Y L DR + +TL D+ND P F S ++ E
Sbjct: 2211 ITVAKSLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGAL 2275
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE ++Y+L D Q I +T++D+ND+ P F+ + S I
Sbjct: 1795 DLIATKRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPRFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S +
Sbjct: 847 QLTTASVIDREEQSFYQLRVVASGG---AVTGDAVVNITVKDLNDNAPHFLQAVESIDAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3617
>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Megachile rotundata]
Length = 5000
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+IA Y L +D+ QP+ + + +++ D NDN P+F + S ++
Sbjct: 2764 EISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLVSVLDKNDNPPQFTRLF-SVNVT 2822
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 2823 ENAEIGTF 2830
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR +PA L+ +T+ D+NDN P F ++ E
Sbjct: 164 LETTGKLDREQVEFYSLNVCARDRGRPARVGFLLVNVTVLDVNDNPPIFQQSDYVVALNE 223
Query: 62 NAEIG-SLSTVNAT 74
+A +G ++ TV+AT
Sbjct: 224 SAPVGTTVLTVHAT 237
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T GLDRE I Y + +D+ P + + LT+ D+NDN+P F I
Sbjct: 606 QLTTKIGLDRETIGEYRILVIAKDQGSPPQSSTATVVLTVQDVNDNSPVFYPWRYLMPIP 665
Query: 61 ENAEIG-SLSTVNAT 74
E+A G S+ V AT
Sbjct: 666 EDAPPGTSVGRVTAT 680
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE + YTL +DR +P + +T+T+ D NDN+P F SA++ E
Sbjct: 2132 LRVSGSLDRELRSNYTLEVTARDRGEPPRSSSTTVTVTVLDENDNSPIFDPRQYSATVAE 2191
Query: 62 NAEIGS 67
NA IG+
Sbjct: 2192 NASIGA 2197
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE + YTL D P ++ + + D+ND++PEF A++ EN+
Sbjct: 2352 RPLDRESVPEYTLTLVAMDTGSPPLTGSGIVRIVVLDVNDHSPEFNRQEYKATVSENSVS 2411
Query: 66 GS 67
G+
Sbjct: 2412 GT 2413
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE I Y L D P +L+ + L+D NDN P F +
Sbjct: 3478 DIETAKQLDRESIPVYDLTIGAIDTGSPPQTGTALVHIELSDTNDNGPIFDPPEVIGYVN 3537
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 3538 ENEPAGTIVMTLSATDPDLPPNGAPFTYK 3566
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA V + + +TD NDNAP + I +A++
Sbjct: 2660 EVLVASGFDYETAPYYEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEASIYNATVP 2719
Query: 61 EN 62
E+
Sbjct: 2720 ED 2721
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D PA + + D+NDNAP F ++A I+EN IG+
Sbjct: 1929 LDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEVGPHAADIVENTTIGT 1988
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L D+ P + + + + D+ND+ P F SA + E + G
Sbjct: 398 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGS 457
Query: 67 ---SLSTVNATIGVN 78
S+S +A G+N
Sbjct: 458 FVASISATDADSGLN 472
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E++ RYTLN D P V+ +T+ + D NDN P F + + I E
Sbjct: 1362 LYLKKPLDYEELERYTLNVTCSDGGHPRLTSVTSLTVEVIDANDNPPVFPNTAIARQIRE 1421
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L V D AW+ +++T+T+ D NDN PEF
Sbjct: 2874 LDREEQDEYLLKLVVADG---AWQAATVLTITIQDQNDNPPEF 2913
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE +Y L D Q +T+ +TD NDNAP F S S +
Sbjct: 1819 QLTLAEALDRESREKYVLKVRADDGLQ---HTDIALTIQVTDTNDNAPMFQSSAYSFDVP 1875
Query: 61 ENAEIGS 67
EN GS
Sbjct: 1876 ENVPRGS 1882
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
L T + LDRE+ Y L D +P +S +T+ L D+ND +PEF S S
Sbjct: 2027 LFTRKLLDREQKPLYNLLLTATDSPRPPARPLSSTVQVTVVLLDVNDMSPEFISP-TKIS 2085
Query: 59 ILENAEIGSLSTVNATIGVNR 79
I+ENA S + V A V+R
Sbjct: 2086 IIENA--ASNTVVMAIKAVDR 2104
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
E+ T LDRE+ + Y L QD ++ +T+ +TD+NDNAP F+S
Sbjct: 2451 EVFTVVPLDREQTSVYHLTLIAQDSSPTELRASAVNLTIFVTDVNDNAPRFSS 2503
>gi|327270403|ref|XP_003219979.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 826
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A Y + D+ P +ITL ++DINDNAP F +S +
Sbjct: 405 KLLTDSPLDRERTAEYNITITATDKGTPPLSTYKIITLQISDINDNAPTFEKSFSSIYVP 464
Query: 61 ENAEIG-SLSTVNAT 74
EN+ G S+ T+ A+
Sbjct: 465 ENSPAGTSIFTIKAS 479
>gi|326671162|ref|XP_001345450.3| PREDICTED: protocadherin alpha-C2-like [Danio rerio]
Length = 807
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+I +Y + H D+ P I++T+ DINDNAP F I + ++EN E
Sbjct: 409 EALDREQINKYDITLHATDKGTPPLTDNETISVTIQDINDNAPTFPRSIYTIHLMENNEP 468
Query: 66 GSL 68
G+L
Sbjct: 469 GAL 471
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDREK A +TL D PA + I + + D+NDNAP+F + S ++ENA IG
Sbjct: 195 SLDREKQALHTLTLTAVDGGTPARSGTASIIIQVLDVNDNAPQFDRQVYSVDLIENAPIG 254
Query: 67 SL 68
+L
Sbjct: 255 TL 256
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ +D E++ + + +D+ I + +TD+NDN PE +SI
Sbjct: 297 EIRVKDVIDFEEVRSFEMYVEAKDKAVNPLSGQCKILVFITDLNDNQPEITIKSFQSSIK 356
Query: 61 ENAEIGSLSTVNATIGVN 78
ENA IG TV A I V+
Sbjct: 357 ENAPIG---TVIAVISVS 371
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE ++ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 N 62
N
Sbjct: 2271 N 2271
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPMYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S ++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVDVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIIATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDRE + RY L DR P + + + + D ND++P F+ + SAS+
Sbjct: 404 EIRSTRPLDRESVPRYRLTVRASDRGDPPRSATARVVVNVLDENDHSPRFSQLF-SASVP 462
Query: 61 ENAEIG 66
ENA +G
Sbjct: 463 ENAPVG 468
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R LDRE +ARY + D W + + + +TD+NDNAP F
Sbjct: 506 DITVSRPLDREDVARYRIRVSAHDS---GWTVSTDVAVAVTDVNDNAPRFREPSYFLECP 562
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V AT
Sbjct: 563 ELPEVGSGVARVAAT 577
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T R LD E I R+ + +D P + + + + D+NDNAP+F A I
Sbjct: 300 QVTTGRPLDFEAIQRFVVWIEARDAGFPPFSSYERLEVEVQDVNDNAPDFREDPFVAEIA 359
Query: 61 EN 62
EN
Sbjct: 360 EN 361
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P +++ +TL D+NDN P + A + EN G+
Sbjct: 1145 LDRETLPVYNLTVLAVDTGTPPATGRAVLLVTLEDVNDNGPVL--TVGEARVAENQPPGT 1202
Query: 68 LST 70
+ T
Sbjct: 1203 VVT 1205
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE 49
L TAR +DRE+++R+ L V+D P + + + D NDN +
Sbjct: 1243 LTTAREIDREQVSRFLLPVVVRDSGLPPMSSTGTVLILVADRNDNPSQ 1290
>gi|301760209|ref|XP_002915919.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-8-like [Ailuropoda
melanoleuca]
Length = 850
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 247 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 306
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 307 PPGAYLATVAA 317
>gi|426229750|ref|XP_004023518.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5-like [Ovis
aries]
Length = 841
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++T+ DINDNAP F S + +
Sbjct: 193 ELVLEQQLDRETQARHQLVLTAVDGGVPARSGTTLISVTVLDINDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPVGTLLLRLNAT 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDREATSHYIIELLAHDEGSPPLHTHLTIRLNISDVNDNAPYFTQQLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE ++ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPVFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 N 62
N
Sbjct: 2271 N 2271
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S ++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVDVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE ++ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEQFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 N 62
N
Sbjct: 2271 N 2271
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPMYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE ++ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 N 62
N
Sbjct: 2271 N 2271
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPMYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|126337657|ref|XP_001362813.1| PREDICTED: protocadherin-8 isoform 2 [Monodelphis domestica]
Length = 971
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP FA I S+ EN
Sbjct: 450 TAAPLDRERIAEYNLTLVAEDRGSPPLRTVRPYTVRVGDENDNAPLFARPIYEVSVRENN 509
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 510 PPGAYLATVAA 520
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQATYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVTEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|395504794|ref|XP_003756732.1| PREDICTED: uncharacterized protein LOC100928159 [Sarcophilus
harrisii]
Length = 2721
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE A YT+ +D P + I L ++D+NDNAP F+ SA I E
Sbjct: 2187 LLTSERLDREATAHYTIELLARDTGSPPLQTSLTILLNISDVNDNAPRFSQQFYSAYIAE 2246
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 2247 NRPPGSLLCTVAAS 2260
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + + L D PA +L+++T+ DINDNAP F + ++
Sbjct: 1974 ELVLERSLDREEQSNHQLVLTAVDGGTPALSGTTLVSITVLDINDNAPVFEPSLLRVTLP 2033
Query: 61 ENAEIGSLST-VNAT 74
EN G L +NAT
Sbjct: 2034 ENTPPGKLLVRLNAT 2048
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A Y L D P + + +++ D+NDNAP F S+L
Sbjct: 1009 ELLLEKPLDREKQADYRLVLTAVDGGSPPRSGTAELKVSVLDVNDNAPAFEQSSYRISVL 1068
Query: 61 ENAEIGS-LSTVNAT 74
E+A G+ L +NAT
Sbjct: 1069 ESAPAGTLLVQLNAT 1083
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE + Y ++ +D P V+ + + ++DINDN P+ + E
Sbjct: 409 LTTSASLDREAVPEYNISITARDAGSPPLSTVTTLRVQVSDINDNPPQATKPSYDVYVEE 468
Query: 62 NAEIGSLSTVNATI 75
N + ++ +N T+
Sbjct: 469 N-NLAGIAILNLTV 481
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE ++Y + D P I L ++D+NDN P F + + E
Sbjct: 1223 LVTATALDREVESKYEIPVTASDAGSPPLSTRRTIFLNVSDVNDNPPSFIQRSHEVFVQE 1282
Query: 62 NAEIGSL 68
N G L
Sbjct: 1283 NNRPGDL 1289
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSAS 58
E++ +D E+ + Y L+ +D+ QP+ E S++ + + D NDNAPE S++N
Sbjct: 2082 EIRVLGPVDFEESSFYELHVRARDQGQPSMEGHSVVQIEVEDANDNAPEVLLTSLVN--P 2139
Query: 59 ILENAEIGSL----STVNATIGVNR 79
+ E+ +G++ + + GVNR
Sbjct: 2140 VPEDTPVGTVVGLFNVRDRDSGVNR 2164
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 4 TARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T RG LD E Y + +D PA E + + + D+NDNAP+ ++ E+
Sbjct: 1119 TLRGPLDFETDNYYEFDVRARDGGTPAMEQHCSLRVDVLDVNDNAPQITLTSELGTLRES 1178
Query: 63 AEIGSLSTVNATIGV 77
AE G TV A I V
Sbjct: 1179 AEPG---TVVALISV 1190
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+ +GS
Sbjct: 262 DTVVGS 267
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVIWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKVLTVSA 2692
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELTEIGSKVTQVSAT 2897
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++TL DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSITLLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETKSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML--TVSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR P+ + +T+ + D NDNAP+F + + +N E+G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKYFTPVTKNVEVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NMALG 809
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVE 594
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 595 NAPTGTELLVLRATDG 610
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + SV
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRSV 3617
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T++ LDRE + Y LN + P+++ + +TL D+NDN PEF + S+ E
Sbjct: 241 IRTSKSLDRETTSSYLLNVRAATGNPPSYDQTQ-VQITLEDVNDNVPEFGTSSVRVSVAE 299
Query: 62 NAEIGSL 68
+A+IGS+
Sbjct: 300 SAQIGSI 306
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE IA++ + D P + + + + D NDN P F+ + EN +
Sbjct: 456 AKALDRESIAKHKMTIIATDNGIPPLSTTASLIVNVVDANDNDPAFSQASYEFLVEENQK 515
Query: 65 IGS----LSTVNATIGVN 78
+G+ +S +A IG N
Sbjct: 516 VGAFVGKISATDADIGDN 533
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT+ LD E+ + Y L D P + V + + + D+NDN P F S + + E
Sbjct: 655 IKTSTVLDHEERSIYRLTVAATDGGNPPRQTVRQLKVEVLDLNDNRPTFTSSSLTFKVRE 714
Query: 62 NAEIG 66
+AE+G
Sbjct: 715 DAEVG 719
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
TA+ LDRE A+Y L D P A + +T+ + D NDN P F + SA+I E+
Sbjct: 1203 TAKTLDRETQAKYDLTIVAYDHGSPVALQGACNLTVMVEDQNDNDPVFDTGHYSATIPED 1262
Query: 63 AEIGS----LSTVNATIGVNR 79
A I + + +A +G N+
Sbjct: 1263 ASIDTSIIKVRATDADLGFNK 1283
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT LDRE Y L D P + + + + DINDN P F N S+ E
Sbjct: 1627 VKTNIVLDREIRETYKLTVIATDEGNPQMTGTATLRINVVDINDNQPTFPPP-NVISVSE 1685
Query: 62 NAEIGSLST 70
E+GS+ T
Sbjct: 1686 GTEVGSVLT 1694
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
R LD E + R+T+ QD P + + + DINDN+P F +A++LE+
Sbjct: 350 RLLDYENLVRHTVIISAQDSGNPQLSANLTLVVDVQDINDNSPVFEHDTYTANVLES 406
>gi|348514397|ref|XP_003444727.1| PREDICTED: protocadherin gamma-C5-like [Oreochromis niloticus]
Length = 1503
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D QP +L+ + + D+NDNAP F + ++L
Sbjct: 730 ELVVDKALDRERQASFRLLLTAVDGGQPEKSGSTLLLIDILDVNDNAPVFDEPVKKVTLL 789
Query: 61 ENAEIGSLST-VNAT 74
ENA +G+L T VNA+
Sbjct: 790 ENAALGTLVTKVNAS 804
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + Y++ D P + ++D+NDNAP F+ S I E
Sbjct: 944 LVTAGNLDRETVPEYSVVIKATDAGSPPLSSQINFVVKVSDVNDNAPTFSQPSYSVDISE 1003
Query: 62 N----AEIGSLSTVNATIGVN 78
N A I +S + +G N
Sbjct: 1004 NNAPSAPIAVVSATDPDLGEN 1024
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ +D E++ Y + +D PA E + +T+ D+NDNAPE V + SI
Sbjct: 838 EIRVKGVVDYEEMNAYHITVQARDGGSPAMEGSCNVIVTVVDVNDNAPEVKLVSLTESIR 897
Query: 61 ENAEIGS 67
E++ G+
Sbjct: 898 EDSAPGT 904
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y ++ +D+ P E + + +TD NDN PE + E+A G
Sbjct: 308 LDYETAKSYDIDVTAKDKGSPQMEGHCRVQVDITDFNDNVPEIVFTSQPKPLREDAPSG- 366
Query: 68 LSTVNATIGVNRCGHTFRGKD 88
TV A I GKD
Sbjct: 367 --TVVALISARDLDSADNGKD 385
>gi|119625347|gb|EAX04942.1| dachsous 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 3371
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1884 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1943
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1944 EDAEVGTVVLVLSAVDKDEGLN 1965
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L QD +P L+++T+ D+NDN P F + +A+I E
Sbjct: 615 ISTIRTLDREVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVYNATIAE 674
Query: 62 NAEIG 66
+A +G
Sbjct: 675 HAPVG 679
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1780 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1839
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 1840 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1878
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2623 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2682
Query: 68 LSTV 71
TV
Sbjct: 2683 HITV 2686
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1676 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1735
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1736 NQNPGEFVT 1744
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 2305 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 2347
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 1245 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 1294
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 2728 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2786
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 2787 TICSINA 2793
>gi|410896878|ref|XP_003961926.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 976
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +D P + T+ L+D NDNAP FA + S++EN
Sbjct: 420 TAASLDRERISEYNLTVMAEDFGSPPMRKIIQYTIRLSDENDNAPHFARGVTEVSVVENN 479
Query: 64 EIGS-LSTVNAT 74
G+ ++TV A+
Sbjct: 480 PPGAYITTVEAS 491
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + YT++ D P + IT+ +TD NDN+P F S ++
Sbjct: 198 ELVLMKELDRETQSSYTVDLVATDGGHPFRSGSTKITILVTDFNDNSPVFDQNSFSVTLP 257
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A +G+ L+ V+A G+N
Sbjct: 258 EDAPVGTVILNLNAVDADDGLN 279
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 1 ELKTARGLDREKIARYT----LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
EL +DRE+I R+T + V + + ++ + + + + DINDN+PEF + +
Sbjct: 86 ELTVGERIDRERICRHTPQCLITFDVVNFSKDRYKLIH-VAVEIRDINDNSPEFPNKESI 144
Query: 57 ASILENAEIGS 67
I ENA +GS
Sbjct: 145 VEISENAAVGS 155
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2766 EIRSIRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2824
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2825 ENSPLGYTVTRVTTSDEDIGIN 2846
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ Q + + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQQSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2662 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2721
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2722 ENLSPRKILTVSA 2734
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + +T+ +TD+NDNAP F+ E E
Sbjct: 2872 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTE 2928
Query: 65 IGS 67
IGS
Sbjct: 2929 IGS 2931
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3510 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3567
Query: 68 L 68
L
Sbjct: 3568 L 3568
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3608 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3659
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T+ LDRE+ A Y L V+ D C + + LTL D+ND+APEF++ + ++
Sbjct: 3075 ELRTSTPLDREEQAVYHL--LVRATDGGGRFCQASVVLTLEDVNDSAPEFSADPYAITVF 3132
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3133 ENTEPGTLLTRVQATDADAGLNR 3155
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3388 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3447
Query: 61 ENAEIG 66
EN +G
Sbjct: 3448 ENKPVG 3453
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1511 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1570
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1571 SAAVGSV 1577
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2343 RTLDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2402
Query: 66 GSLST 70
G T
Sbjct: 2403 GHFVT 2407
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN P F+ +A I E+A
Sbjct: 3290 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDA 3345
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1616 IKTAKELDRSNQVEYDLMVKATDKGSPPMSEITSVRIFITIADNASPKFTSKEYSVEISE 1675
Query: 62 NAEIGSL 68
IGS
Sbjct: 1676 TVSIGSF 1682
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDSGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEF 50
+K AR LDRE + L +D R++P ++ ++L D+NDN P+F
Sbjct: 877 VKIARPLDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKF 927
>gi|197100101|ref|NP_001124892.1| protocadherin gamma-C5 precursor [Pongo abelii]
gi|55726265|emb|CAH89904.1| hypothetical protein [Pongo abelii]
Length = 945
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDRETQARHQLVLTAVDGGTPAHSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQSLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHAKARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
Length = 2676
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G+DRE++ Y LN D PA +++T+ D NDN PEF++V S +I EN ++G
Sbjct: 129 GVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVG 188
Query: 67 S----LSTVNATIGVN 78
+ +S + IG N
Sbjct: 189 TSILQVSASDKDIGTN 204
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE+I + L V DR P + + LTD NDN P F +AS+ E
Sbjct: 450 ITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFE 509
Query: 62 NAEIGS 67
N+ GS
Sbjct: 510 NSPSGS 515
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE A Y L+ +D P + + IT+ + D NDN P F + S++I
Sbjct: 1701 ELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTIS 1760
Query: 61 ENAEIGSLSTVNAT 74
E G+ S +N T
Sbjct: 1761 ELTPPGT-SILNLT 1773
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 12/78 (15%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL----ENA 63
+D EKI L +D+ P + +T+ + DINDN+P+F NS+SIL E+
Sbjct: 765 VDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQF----NSSSILVRLPEDT 820
Query: 64 EIG----SLSTVNATIGV 77
IG ++S +A GV
Sbjct: 821 PIGHTFYTVSVFDADSGV 838
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF-ASVINSASIL 60
++T R LD E I + ++ D P +T+ + D+NDN P F N +L
Sbjct: 2464 IRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVL 2523
Query: 61 ENAEIGS-LSTVNAT 74
EN + S L +NAT
Sbjct: 2524 ENLPLNSRLYEINAT 2538
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ +R LD E + YT V D C + + ++LTD+NDN P F S E
Sbjct: 553 VTNSRTLDHEVQSSYTF--QVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFE 610
Query: 62 NAEIG 66
N IG
Sbjct: 611 NTRIG 615
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR---DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
++T +DRE+I+ Y+L D+ +Q + + + + D+NDNAP+F S N
Sbjct: 1387 IQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR-NLTY 1445
Query: 59 ILE----NAEIGSLSTVNATIG 76
++E N ++ S++ ++ G
Sbjct: 1446 VMEDEPFNFQVTSITALDPDTG 1467
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA+ LDRE A + L D P + + +TD+NDN P F ++ +I
Sbjct: 2125 EITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDP-LSEVNIR 2183
Query: 61 ENAEIGSLST 70
E+ G++ T
Sbjct: 2184 EDTRTGAVVT 2193
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI-- 65
LDRE I Y L D P + + + + D+NDN P F + + EN +
Sbjct: 974 LDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVAT 1033
Query: 66 --GSLSTVNATIGVNRCGH-TFR 85
G++S ++ G N GH T+R
Sbjct: 1034 YLGAVSASDSDEGSN--GHVTYR 1054
>gi|358413168|ref|XP_003582484.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Bos taurus]
gi|359067613|ref|XP_003586364.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Bos taurus]
Length = 840
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++T+ DINDNAP F S + +
Sbjct: 193 ELVLEQQLDRETQARHQLVLTAVDGGVPARSGTTLISVTVLDINDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPVGTLLLRLNAT 267
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDREATSHYIIELLAHDAGSPPLHAHLTIRLNISDVNDNAPYFTQQLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + +G+N
Sbjct: 2783 ENSSLGYTVTRVTTSDEDVGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAW------ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQTRSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|126337655|ref|XP_001362726.1| PREDICTED: protocadherin-8 isoform 1 [Monodelphis domestica]
Length = 1069
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP FA I S+ EN
Sbjct: 450 TAAPLDRERIAEYNLTLVAEDRGSPPLRTVRPYTVRVGDENDNAPLFARPIYEVSVRENN 509
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 510 PPGAYLATVAA 520
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQATYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVTEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + +G+N
Sbjct: 2783 ENSSLGYTVTRVTTSDEDVGIN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKWPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 1179
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T + LD E+ +TL +DR +P+ +++ + + D+N+N P F + SAS+
Sbjct: 1073 VRTTQSLDFEERQVHTLTIVARDRGEPSLSSETMLVIEVIDVNENLYTPVFDDFVVSASV 1132
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN IG+L T V+ G +R G++ RG D
Sbjct: 1133 FENQPIGTLVTTVRAKDVDPPGGDSRIGYSIRGGD 1167
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y LN V D +P ++ +T+ D+NDNAP+F + S I
Sbjct: 861 DLNTIGYLDRERENEYYLNISVFDLGKPQKSASKMLPITILDVNDNAPKFEKSLASFRIS 920
Query: 61 ENAEIGS 67
E A G+
Sbjct: 921 ETALNGT 927
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 8 LDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ Y L +D D P +L+ +T+ D+NDNAP FA + I E+ I
Sbjct: 971 LDRERQEIYELRIRARDNSNDTPPLHSDALVRVTVDDVNDNAPTFALSNYNVKIREDVPI 1030
Query: 66 GS-LSTVNAT 74
+ ++ V+AT
Sbjct: 1031 WTVVAVVDAT 1040
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 LDRE-KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L DR P + + L D+NDNAP F+ I + E A I
Sbjct: 392 LDRETALQGYNLTLRAMDRGVPQRYSYKFVPVHLVDVNDNAPVFSREIYEVKVPETAPIN 451
Query: 67 S 67
+
Sbjct: 452 T 452
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2726 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + +G+N
Sbjct: 2785 ENSSLGYTVTRVTTSDEDVGIN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2622 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2681
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2682 ENLSPRKILTVSA 2694
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2884
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2885 ELTEIGS 2891
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAW------ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQTRSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3470 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3527
Query: 68 L 68
L
Sbjct: 3528 L 3528
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2942 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 3001
Query: 67 S 67
+
Sbjct: 3002 T 3002
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3619
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ ARYTL DR QP + I++ + D NDN P F AS+ EN
Sbjct: 1288 SARPLDREQHARYTLQLQASDRGQPITHQGHCNISVFVEDQNDNEPHFDQPKYVASVPEN 1347
Query: 63 AEIGS----LSTVNATIGVN 78
A IGS ++ +A +GVN
Sbjct: 1348 AAIGSSVLRINARDADLGVN 1367
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ AR LD E A+ LN D P + + + + D+NDNAPEF + + S+ E
Sbjct: 240 IRIARPLDHEAKAQVLLNIQATSGDPPVYGHTQ-VNIEVEDVNDNAPEFETSMVRISVPE 298
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 299 NAELGT 304
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + + +TD+NDNAPE A
Sbjct: 581 EISTREPLDRELRELYDLMVEARDQGTPTRSARAPVRVHVTDVNDNAPEIA 631
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 25/96 (26%)
Query: 4 TARG-LDREKIARYTLNAHVQD------------RDQPAWEC-----------VSLITLT 39
T RG DRE ARYTL +V+D R Q + E V+ + ++
Sbjct: 1160 TTRGQFDRETQARYTLPIYVRDANRMSATPTSAIRKQRSSESSAEPATGQHFDVATLIIS 1219
Query: 40 LTDINDNAPEF-ASVINSASILENAEIGSLSTVNAT 74
+ D+NDNAPEF S+ EN+E + TV A+
Sbjct: 1220 IGDVNDNAPEFRPGSCYGLSVPENSESSVIHTVVAS 1255
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---- 62
LDRE RY L D PA + + + + D NDN P+F I EN
Sbjct: 484 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRRG 543
Query: 63 AEIGSLSTVNATIGVN 78
A +G +S +A +G N
Sbjct: 544 AVVGVVSASDADLGEN 559
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE----NA 63
LDRE IA Y LN V D P+ +L+ + + D+NDN P F +SAS+LE N
Sbjct: 2308 LDRETIAEYHLNIQVSDNGNPSLTSSALLEIQVGDVNDNPPIFIVTNSSASVLEEQPINT 2367
Query: 64 EIGSLSTVNATIGVN 78
+ +++ +A GVN
Sbjct: 2368 TVTTVTARDADEGVN 2382
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTL+ QD+ + +T+TL DINDN P+F S ASI EN ++ +
Sbjct: 2202 LDREGRYEYTLSVTAQDKGMVPLVSTATVTITLNDINDNIPQFESQNMEASINENNQVPA 2261
Query: 68 LSTVNA 73
L T A
Sbjct: 2262 LVTTCA 2267
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T + LDRE A YTL H D+ P+ + + + + D+NDN P F S+
Sbjct: 2718 ELTTTKVLDRETNAFYTLTIHAVDQGTPSLTGTTTVEVKVLDVNDNGPAFTRT-PVGSVP 2776
Query: 61 ENAEIGS 67
E++E+G+
Sbjct: 2777 EHSEVGT 2783
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE A+Y L + D+ P IT+ + D+NDNAP F+S ++EN G
Sbjct: 2097 LDRETDAQYVLTVYAWDKGVPRRTSTMQITVIIQDVNDNAPAFSSESYKVEVMENMPTG 2155
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + +Y L D P + + +T+ D NDNAP FA S + E E+G
Sbjct: 1253 LDREAVPQYILTVSAVDHGTPQLLSTTTQVVITVLDENDNAPVFAQSARSVDVAETLEVG 1312
Query: 67 SLSTV 71
L T+
Sbjct: 1313 ELITI 1317
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LDRE+I++Y L V+D P + + + +TD ND+APEF ++ E
Sbjct: 406 IQVAASLDRERISQYNLTFFVKDFGSPPRYTFAYLIIYVTDANDHAPEFEYEQYEVTLSE 465
Query: 62 NAEIGSL 68
+ GS
Sbjct: 466 DLPSGSF 472
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASI 59
E+ + LD E ++ Y L +D D ++ C T+ +TD+NDNAP F + AS+
Sbjct: 2618 EVTIEKPLDYEVMSYYQLWIEAKDDDHSSYISC----TVHVTDVNDNAPVFTERVYFASV 2673
Query: 60 LENAEIG-SLSTVNA 73
LE + G S+ TV+A
Sbjct: 2674 LEGEDSGTSVVTVSA 2688
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 16 YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG-SLSTVNAT 74
+ LN D+ P +L+ + +T++N +AP+F S ++ ENA+IG S+ TV AT
Sbjct: 3052 FHLNVRASDQGNPPLSDETLVKIQVTEVNQHAPDFIGDPYSETVFENAQIGSSILTVLAT 3111
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++T LDRE YTL D D + ++ + + L D NDN PEF+ + + +
Sbjct: 1780 QIRTMDELDRETTPSYTLAISASDGDLSS---ITTLDIYLLDANDNPPEFSKSVYAFVVS 1836
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 1837 ESETIGT 1843
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA+ +DRE Y L V +L+ +T++D NDN+PEF + + +++
Sbjct: 828 EITTAKEIDREVTPFYQLTVIVNGGPVVGQ---TLVNITISDKNDNSPEFPQPMITTAVV 884
Query: 61 ENAEIG-SLSTVNAT 74
EN +G + ++AT
Sbjct: 885 ENWSVGHEVQQIHAT 899
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ LDRE+I Y L D P + + +++ D+NDN P F S+ E
Sbjct: 3463 ISTSAVLDREEIQLYNLTVAAVDGGNPPQTGYAEVEISIDDVNDNGPMFYPEDTVGSVYE 3522
Query: 62 NAEIGS 67
N G+
Sbjct: 3523 NQSPGT 3528
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE +R LN QD+ + I + + D ND+AP F + +I+E
Sbjct: 511 ITTKSALDREIASRIVLNITAQDQGATQHLAETHIIINIADENDDAPTFVITSYNVTIME 570
Query: 62 N----AEIGSLSTVNATIGVN 78
N E+ +S + GVN
Sbjct: 571 NFTPPREVVIVSATDMDSGVN 591
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE Y LN QD P L+ +T+ D NDN P F S++E+
Sbjct: 193 TTHTLDREAQDFYQLNISAQDGGIPPRFGFLLVDITIRDANDNPPVFDPSEYEVSLIESI 252
Query: 64 EIGSLS-TVNAT 74
E +L TV AT
Sbjct: 253 EPDTLVLTVRAT 264
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 ELKTARGLDREKIAR------YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVI 54
E+++A+ DRE++ R + + V D E + I + ++D+NDNAP+F
Sbjct: 1135 EIRSAKTFDREQLIRDSLDTLFEFDVTVVDGGVSPLEDHAHIMVYISDVNDNAPQFHLSY 1194
Query: 55 NSASILENA 63
SASI E A
Sbjct: 1195 YSASISETA 1203
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LDRE YT+ D P +++T+ + D NDN P F S +LE
Sbjct: 1033 LYVKNALDRENTDIYTITVVASDNGVPQRSSSAVVTIHVLDANDNRPLFNLQDYSFFLLE 1092
Query: 62 ----NAEIGSLSTVNATIGVN 78
N +G ++ +A IG N
Sbjct: 1093 ELSPNVYVGKVTATDADIGRN 1113
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E + LN +D + E + + + L D+NDN+PEF S + +I E
Sbjct: 3143 ITVAEELDFEAQDTHILNVSARDLGVISLESFARVDVVLIDVNDNSPEFESQEYNPTIPE 3202
Query: 62 NAEIGS 67
N+ G+
Sbjct: 3203 NSPSGT 3208
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINSASI 59
TA+ LDRE Y+L+ + DQP + +++ + D+NDNAPEF + N ++
Sbjct: 1989 TAKELDRELKEYYSLD--ITASDQPLEGTPQTATARVSIVIGDVNDNAPEFQNT-NLTTV 2045
Query: 60 LENAEIGSLSTV 71
E+A G+ +TV
Sbjct: 2046 SEDA--GAYTTV 2055
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-----WECVSLITLTLTDINDNAPEFASVINS 56
+ T+ +DRE + V +DQ +T+ + DINDNAP F S N+
Sbjct: 1459 ISTSAEIDREDLPNGMFEIVVMAKDQAIPVSNRKSATKRVTIMVLDINDNAPVFVSQ-NA 1517
Query: 57 ASILEN----AEIGSLSTVNATIGVN 78
A+I+E+ A++ +++ V+ G N
Sbjct: 1518 ATIMESTLTGADVTTVTAVDPDAGSN 1543
>gi|345307383|ref|XP_003428569.1| PREDICTED: cadherin-1-like [Ornithorhynchus anatinus]
Length = 838
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDREKI +Y L +H D E I +T+TD NDN P+F + S++E
Sbjct: 171 LKVTEPLDREKIPKYILQSHAVTSDGKTVEEPMEIVITVTDQNDNKPQFTQEVFEGSVVE 230
Query: 62 NAEIG-SLSTVNAT 74
+ G S+ VNAT
Sbjct: 231 GSSPGTSVMQVNAT 244
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---NA 63
GLDRE I +Y L V D + + + + D NDN P F S + + E NA
Sbjct: 288 GLDRETIPQYKLIVQVADMNGEGLSTTATAVINVADSNDNPPIFDSPVYVGQVRENEVNA 347
Query: 64 EIGSLSTVNATI 75
EI L +A +
Sbjct: 348 EIVRLKVTDADV 359
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDN-APEFASVINSASI 59
LKTA+GLD E +YTL V + D A E S T+T+ +++N AP F + +
Sbjct: 391 LKTAKGLDFETKNKYTLYVTVVNEDPFAIELHTSTATVTVDVMDENEAPVFVPPVKKVEV 450
Query: 60 LENAEIG 66
E+ +G
Sbjct: 451 PEDFAVG 457
>gi|444721941|gb|ELW62648.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2618
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 397 EIRSIRPLDREKVSHYVLTVRSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 455
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN +G ++T + IGVN
Sbjct: 456 ENFPLGYTVTRVTTSDEDIGVN 477
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R LDRE RY + D W + +T+ +TD+NDNAP F+ E E
Sbjct: 503 SRPLDREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTE 559
Query: 65 IGS-LSTVNAT 74
IGS ++ V+AT
Sbjct: 560 IGSKVTQVSAT 570
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 293 KISISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFISEIL 352
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 353 ENLSPRKILTVSA 365
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 1141 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TISEGEVMENKRPGT 1198
Query: 68 L 68
L
Sbjct: 1199 L 1199
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 3 KTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+ G I R++ DR P+ + +T+ D NDNAP+F+ V + +N
Sbjct: 609 QNVSGFSNVNINRHSFVVTSSDRGNPSLLSETTVTINTVDSNDNAPQFSQVKYFTPVTKN 668
Query: 63 AEIGS 67
++G+
Sbjct: 669 VKVGT 673
>gi|440892175|gb|ELR45490.1| Protocadherin gamma-C5 [Bos grunniens mutus]
Length = 942
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++T+ DINDNAP F S + +
Sbjct: 193 ELVLEQQLDRETQARHQLVLTAVDGGVPARSGTTLISVTVLDINDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPVGTLLLRLNAT 267
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDN P F + A I E
Sbjct: 406 LLTSQPLDREATSHYIIELLAHDAGSPPLHAHLTIRLNISDVNDNTPYFTQQLYMAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|390460431|ref|XP_002745424.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Callithrix
jacchus]
Length = 2880
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1393 ELSTTRALDREQVSNFTLAILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1452
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1453 EDAEVGTVVLMLSAVDKDEGLN 1474
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1289 EVVTTTMLDREIQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEFIVFSYDIEVL 1348
Query: 61 ENAEIGSLSTVNAT 74
EN E + TV A+
Sbjct: 1349 ENQEPEVVYTVLAS 1362
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + + D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2132 LDREASASHEIVILASDSGCPPLSATAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2191
Query: 68 LSTV 71
TV
Sbjct: 2192 HITV 2195
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1185 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQQLYEASVKE 1244
Query: 62 NAEIGSL 68
N G
Sbjct: 1245 NQNPGEF 1251
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1814 LDYELTSSYSLIVQATDKGMPRLSNTTVIKIQVTDINDNAPAF 1856
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL + LDRE + + V DR P + +++TDINDN P F
Sbjct: 754 ELISWVALDREHQGHHQMTVLVTDRGSPPRNATIAVYVSVTDINDNKPLF 803
>gi|119625349|gb|EAX04944.1| dachsous 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 2776
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1289 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1348
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1349 EDAEVGTVVLVLSAVDKDEGLN 1370
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1185 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1244
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 1245 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1283
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2028 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2087
Query: 68 LSTV 71
TV
Sbjct: 2088 HITV 2091
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1081 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1140
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1141 NQNPGEFVT 1149
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1710 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1752
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 650 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 699
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 2133 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2191
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 2192 TICSINA 2198
>gi|47059046|ref|NP_060109.2| protocadherin-23 isoform 1 [Homo sapiens]
gi|74762378|sp|Q6V1P9.1|PCD23_HUMAN RecName: Full=Protocadherin-23; AltName: Full=Cadherin-27; AltName:
Full=Cadherin-like protein CDHJ; AltName:
Full=Cadherin-like protein VR8; AltName: Full=Protein
dachsous homolog 2; AltName: Full=Protocadherin PCDHJ
gi|38049487|gb|AAR10443.1| cadherin protein [Homo sapiens]
Length = 2916
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1429 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1488
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1489 EDAEVGTVVLVLSAVDKDEGLN 1510
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1325 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1384
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 1385 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1423
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2168 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2227
Query: 68 LSTV 71
TV
Sbjct: 2228 HITV 2231
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1221 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1280
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1281 NQNPGEFVT 1289
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1850 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1892
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 790 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 839
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 2273 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2331
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 2332 TICSINA 2338
>gi|119625348|gb|EAX04943.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|119625350|gb|EAX04945.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 2527
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1040 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1099
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1100 EDAEVGTVVLVLSAVDKDEGLN 1121
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 936 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 995
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 996 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1034
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 1779 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 1838
Query: 68 LSTV 71
TV
Sbjct: 1839 HITV 1842
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 832 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 891
Query: 62 NAEIGSLST 70
N G T
Sbjct: 892 NQNPGEFVT 900
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1461 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1503
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 401 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 450
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 1884 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 1942
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 1943 TICSINA 1949
>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
caballus]
Length = 4351
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK A+ LD E+ + Y+L D +P + IT+ + D+NDN P F + S S+
Sbjct: 3379 ELKVAKALDWEQTSSYSLRVRATDNGRPPLHEDTDITIQVVDVNDNPPRFFQLNYSTSVQ 3438
Query: 61 ENAEIGS 67
EN+ +GS
Sbjct: 3439 ENSPVGS 3445
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + L VQD +P+ S + + + D+NDN P F+ + + + E
Sbjct: 1194 LSTARQLDRENKDEHILEVTVQDNGEPSLRSTSRVVVRILDVNDNPPVFSHKLFNVRLPE 1253
Query: 62 NAEIGS 67
G+
Sbjct: 1254 RLSPGT 1259
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATSFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQVTISE 831
Query: 62 NAEIGS 67
+ EIG+
Sbjct: 832 DTEIGT 837
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK Y+L A D C + +TL + D+NDNAP F + ++
Sbjct: 3068 ELTTLTALDREKKDVYSLVAKATDGG--GQSCQADVTLHVEDVNDNAPRFFPSHCAVAVF 3125
Query: 61 ENAEI 65
+N +
Sbjct: 3126 DNTTV 3130
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LD E +Y L+ + + ++ I + +TD N++ P F + S +LE
Sbjct: 3275 LYVNRSLDFETNPKYFLSIECSRKGSSSLSDMTTIVVNITDTNEHRPRFLQDLYSTRVLE 3334
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G L TV+AT +G N+ GH
Sbjct: 3335 NAVVGDLVLTVSATDEDGPVNSAITYSLVGGNQLGH 3370
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATI 75
L+ +++TD NDNAP+FAS S++EN+E G +L T++A +
Sbjct: 2893 LVEVSITDENDNAPQFASEDYRGSVVENSEPGEPVATLKTLDADV 2937
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP V+ +T+TL D NDN+P+ ++S
Sbjct: 874 ELVVTGHLDRESEPQYILK--VEARDQPRKGHQLFSVTDLTITLEDANDNSPQCIMELHS 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE++A+Y L D ++ L+ + + DINDN+P+ + ++ + + E+
Sbjct: 2972 KTLDREQMAKYLLRITASD---GKFQASVLVEIFVLDINDNSPQCSQLLYTGKVSEDVSP 3028
Query: 66 G 66
G
Sbjct: 3029 G 3029
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
L + LD E+ A Y L+ V D +P A + + + + D+N+N P FAS ++
Sbjct: 981 LSLEKELDFERRAGYNLSLWVSDSGRPLARRTLCHVEVIVLDVNENLHPPRFASFVHQGQ 1040
Query: 59 ILENAEIGS 67
+ EN+ G+
Sbjct: 1041 VQENSPSGT 1049
>gi|119625352|gb|EAX04947.1| dachsous 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 2666
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1179 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1238
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1239 EDAEVGTVVLVLSAVDKDEGLN 1260
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1075 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1134
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 1135 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1173
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 1918 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 1977
Query: 68 LSTV 71
TV
Sbjct: 1978 HITV 1981
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 971 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1030
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1031 NQNPGEFVT 1039
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1600 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1642
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 540 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 589
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 2023 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2081
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 2082 TICSINA 2088
>gi|397517960|ref|XP_003829171.1| PREDICTED: protocadherin gamma-C5 [Pan paniscus]
Length = 878
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|311266341|ref|XP_003131054.1| PREDICTED: protocadherin-8 isoform 1 [Sus scrofa]
Length = 1071
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|156379563|ref|XP_001631526.1| predicted protein [Nematostella vectensis]
gi|156218568|gb|EDO39463.1| predicted protein [Nematostella vectensis]
Length = 868
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE IA YTL DR P +T+T+ D+NDNA F+ SA +LE
Sbjct: 762 IRTIATLDREDIASYTLLVQASDRGVPPQTETVHVTVTILDVNDNAAVFSQSAFSARVLE 821
Query: 62 NAEIG 66
+A +G
Sbjct: 822 DAPVG 826
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWE---CVSLITLTLTDINDNAPEFASVINSASILEN-- 62
LDRE Y LN V+DR E V +T+ +TD NDN P F I + +I EN
Sbjct: 556 LDRETRDLYELNITVRDRGNTEQERRAAVMQLTIEVTDENDNPPVFTQEIYTTTIPENMA 615
Query: 63 --AEIGSLSTVNATIGVNRCGHTF 84
A + ++T + IG+N HT+
Sbjct: 616 SGASVARVATTDRDIGIN-ANHTY 638
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+GLD E + Y L D D P V+ +T+T+ D NDN P F + S I EN
Sbjct: 292 QGLDYEAVTSYVLLVTATDGDASSPKSSMVN-VTVTVKDENDNEPTFTPAVYSVVIPENT 350
Query: 64 EIGS 67
+G+
Sbjct: 351 TVGT 354
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E Y L+ +DR P V+ + + L+D NDN P F+ + SI E G
Sbjct: 663 GLDYETKYTYYLSITARDRGSPQLYAVAGVRIFLSDTNDNKPVFSPTLYLTSISEATSAG 722
Query: 67 S 67
+
Sbjct: 723 T 723
>gi|85567530|gb|AAI12082.1| Protocadherin gamma subfamily C, 5, isoform 2 precursor [Homo
sapiens]
gi|85567536|gb|AAI12084.1| Protocadherin gamma subfamily C, 5, isoform 2 precursor [Homo
sapiens]
Length = 878
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|127140939|ref|NP_001076027.1| protocadherin gamma-C5 precursor [Pan troglodytes]
gi|62510855|sp|Q5DRA2.1|PCDGM_PANTR RecName: Full=Protocadherin gamma-C5; Short=PCDH-gamma-C5; Flags:
Precursor
gi|410352053|gb|JAA42630.1| protocadherin gamma subfamily C, 5 [Pan troglodytes]
Length = 944
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVEVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|14277685|ref|NP_115783.1| protocadherin gamma-C5 isoform 2 precursor [Homo sapiens]
gi|5457100|gb|AAD43786.1|AF152526_1 protocadherin gamma C5 short form protein [Homo sapiens]
gi|119582360|gb|EAW61956.1| hCG1982215, isoform CRA_ai [Homo sapiens]
Length = 878
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGMN 2804
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P + I ++L DINDN+P F V A I E
Sbjct: 641 LSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE ++ L D PA I + + D+NDN P FAS + +I
Sbjct: 2315 ELRVIQSLDRESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E+I +Y L +D P + + +T+ D+NDN P F + IL
Sbjct: 2620 QVSISQPLDFERIQKYVLWIEARDGGFPPFSSYEKLDITVLDVNDNVPIFKEDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS + V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVCGVSATDG 502
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE R+ + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRFRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELTEIGSRVTQVSAT 2897
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F + ++ E
Sbjct: 2211 ITVAKPLDREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPE 2270
Query: 62 NAE 64
N E
Sbjct: 2271 NLE 2273
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR P+ + +T+ + D NDNAP+F ++ +
Sbjct: 2934 KYQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKYFTPVT 2993
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 2994 KNVKVGT 3000
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q A + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLS 2053
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDVRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V + V + +T+ D+NDN+P F + S +++
Sbjct: 847 QLSTASVIDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTLQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQIF-SAHVP 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGMN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P + I ++L DINDN+P F V A I E
Sbjct: 641 LSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE ++ L D PA I + + D+NDN P FAS + +I
Sbjct: 2315 ELRVIQSLDRESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E+I +Y L +D P + + +T+ D+NDN P F + IL
Sbjct: 2622 QVSISQPLDFERIQKYVLWIEARDGGFPPFSSYEKLDITVLDVNDNVPIFKEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2682 ENLSPRKILTVSA 2694
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAW-----ECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS + V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVCGVSATDG 502
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3470 LDRETLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3527
Query: 68 L 68
L
Sbjct: 3528 L 3528
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE R+ + D W + +T+ +TD+NDNAP F+
Sbjct: 2828 DIVISRPLNREDTDRFRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2885 ELTEIGSRVTQVSAT 2899
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F + ++ E
Sbjct: 2211 ITVAKPLDREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPE 2270
Query: 62 NAE 64
N E
Sbjct: 2271 NLE 2273
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR P+ + +T+ + D NDNAP+F ++ +
Sbjct: 2936 KYQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKYFTPVT 2995
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 2996 KNVKVGT 3002
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q A + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLS 2053
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDVRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V + V + +T+ D+NDN+P F + S +++
Sbjct: 847 QLSTASVIDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTLQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3619
>gi|291390385|ref|XP_002711685.1| PREDICTED: E-cadherin-like [Oryctolagus cuniculus]
Length = 884
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA+YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 216 LKVTEPLDREHIAKYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQEVFKGSVME 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 276 GALPGTSVMQVTAT 289
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TDINDN P F + EN
Sbjct: 334 GLDRETYPEYTLVVQAADLQGEGLSTTAEAVITVTDINDNPPVFNPTTYVGQVPENEANY 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 LVATLKVT 401
>gi|11128023|ref|NP_061752.1| protocadherin gamma-C5 isoform 1 precursor [Homo sapiens]
gi|37999826|sp|Q9Y5F6.1|PCDGM_HUMAN RecName: Full=Protocadherin gamma-C5; Short=PCDH-gamma-C5; Flags:
Precursor
gi|5456984|gb|AAD43733.1| protocadherin gamma C5 [Homo sapiens]
gi|119582357|gb|EAW61953.1| hCG1982215, isoform CRA_af [Homo sapiens]
Length = 944
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRPPGSL 472
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|410947492|ref|XP_003980480.1| PREDICTED: protocadherin-8 [Felis catus]
Length = 779
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 222 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 281
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 282 PPGAYLATVAA 292
>gi|426345778|ref|XP_004040576.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Gorilla gorilla
gorilla]
Length = 2916
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE+++ +TL D+ P V + + + D ND++P F ++ +S+
Sbjct: 1429 DLSTTRALDREQVSNFTLAILCSDQGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1488
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1489 EDAEVGTVVLVLSAVDKDEGLN 1510
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1325 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1384
Query: 61 ENAEIGSLSTVNAT 74
EN E + TV A+
Sbjct: 1385 ENQEPEVVYTVLAS 1398
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2168 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2227
Query: 68 LSTV 71
TV
Sbjct: 2228 HITV 2231
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1221 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1280
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1281 NQNPGEFVT 1289
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1850 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1892
>gi|47227015|emb|CAG05907.1| unnamed protein product [Tetraodon nigroviridis]
Length = 940
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +D P + T+ L+D NDNAP FA + S++EN
Sbjct: 393 TAAVLDRERISEYNLTVMAEDFGSPPLRKIIQYTIRLSDENDNAPHFARAVTEVSVVENN 452
Query: 64 EIGS-LSTVNAT 74
G+ ++TV A+
Sbjct: 453 PPGAYITTVEAS 464
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + Y+++ D P + IT+ +TD NDN+P F S S+
Sbjct: 171 ELVLMKELDRETQSSYSVDLVATDGGHPFRSGSTKITILVTDFNDNSPVFDQNSFSVSLP 230
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A +GS L+ V+A G+N
Sbjct: 231 EDAPVGSVILNLNAVDADDGLN 252
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 1 ELKTARGLDREKIARYT----LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
EL +DRE+I R+T + V + + ++ + + + + DINDN+PEF + +
Sbjct: 59 ELTVGERIDRERICRHTPQCLITFDVVNFSKDRYKLIH-VAVEIRDINDNSPEFPNKESI 117
Query: 57 ASILENAEIGS 67
I EN +GS
Sbjct: 118 VEISENVAVGS 128
>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
Length = 4589
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y N V+ D C + I L L D+NDNAP+F + + ++
Sbjct: 3079 ELKTLAPLDREEQAVY--NLLVRATDGGGRFCQANIVLPLEDVNDNAPQFTADPYTVTVF 3136
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3137 ENTEPGTLLTRVQATDADTGLNR 3159
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EVKVTKLLDRETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1515 LSTSEKLDHEAVHQHVLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGSL 68
+A GS+
Sbjct: 1575 SAAAGSV 1581
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 775 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDIIILDANDNPPEFLQESYFVEVNE 834
Query: 62 NAEIGS 67
+ EI S
Sbjct: 835 DKEINS 840
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T+ LDRE ++ Y L + DR I + + D+NDNAP+ + + I+E
Sbjct: 1092 LETSDLLDRESMSHYWLTVYAADRAVVPLSSFIEIYIEIEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + +TDINDN P F+ +VI+ ++LE
Sbjct: 3294 LDYESAHEYYLTVEATDGGTPSLSDVATANINVTDINDNTPSFSQDTYMAVISEDAVLEQ 3353
Query: 63 AEIGSLS 69
+ I L+
Sbjct: 3354 SVITVLA 3360
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2347 RTLDYEQFQQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHATH 2406
Query: 66 G 66
G
Sbjct: 2407 G 2407
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE +A ++ + +D I + LTD NDNAP+F + +I +A
Sbjct: 2551 TLEKLDRETLAEKVISVRLMAKDTGGKVAFCTINVILTDDNDNAPQFRATKYEVNIGSSA 2610
Query: 64 EIGS 67
G+
Sbjct: 2611 AKGT 2614
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1200 TSRRLDREQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQF 1246
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1620 IKTAKELDRSNQEEYDLMVKATDKGNPPMSEMTSVHIFVTVADNASPKFTSKEYSIEISE 1679
Query: 62 NAEIGSL 68
IGS
Sbjct: 1680 TISIGSF 1686
>gi|311266343|ref|XP_003131055.1| PREDICTED: protocadherin-8 isoform 2 [Sus scrofa]
Length = 974
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE + Y LN QDR +P + + + + D NDN+P F SAS+ E
Sbjct: 2219 LRVVNALDRELCSSYVLNITAQDRGEPPQSTTTRLLIRILDENDNSPVFDPKQYSASVAE 2278
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2279 NASIGAM 2285
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+KTA LDRE IA Y L D P + +T+T+TD+NDN P FA I
Sbjct: 3583 EIKTAALLDRESIAHYNLIIGAIDTGLPPQTGSAELTITITDVNDNGPTFAPEALQGYIA 3642
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T+ AT
Sbjct: 3643 ENEPPGTSIMTLAAT 3657
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE++A Y L D+ P + + + L D NDN P+F + S ++
Sbjct: 2846 EIYTTMRLDREELADYALVVEAVDQGVPQLTGTASVMIHLLDKNDNPPKFTRLF-SLNVT 2904
Query: 61 ENAEIGSL 68
ENAE+GS
Sbjct: 2905 ENAELGSF 2912
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ I EN
Sbjct: 1963 TAR-LDYEEVQHYILLVQAQDNGQPSLSNTITVYCNVLDLNDNAPIFDPMSYSSEIFENV 2021
Query: 64 EIG 66
IG
Sbjct: 2022 PIG 2024
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D P+ + + + D NDNAP+F + + SI ENA
Sbjct: 1099 LDREERDYYALTVACEDAGYPSRSSQVPVVIHVLDENDNAPQFTNSTFTFSIPENAPADT 1158
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1159 FVGKLTAVDKDIGRN 1173
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSA--S 58
L TAR +DRE A Y L D ++ +C L+ +++ D+NDNAP FA + S S
Sbjct: 884 LTTARPIDREAQASYQLIILASSPDFSSYGKC--LVRISVIDVNDNAPSFAQDLPSMLIS 941
Query: 59 ILENAEIG 66
+ EN +G
Sbjct: 942 VPENTAVG 949
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2950 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 3006
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE + Y L D P ++ + + DINDN P F ASI
Sbjct: 2431 EISLLKPLDRESQSEYILTLVAMDTGLPPLTGSGIVRVEVQDINDNGPVFELNSYHASIE 2490
Query: 61 ENAEIGSL 68
EN +G++
Sbjct: 2491 ENLPVGTV 2498
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR P +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1538 IYTLREIDRESIDTFRLTVVATDRALPPQHQLSTAKLVTVIVEDINDNAPIFVSM--NAA 1595
Query: 59 IL 60
IL
Sbjct: 1596 IL 1597
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEF 50
+L T LDRE +A Y + +D+ P + + L++ DINDN+PEF
Sbjct: 669 QLTTRHTLDRETMANYEILVIARDQGAPIPQSATATVYLSVADINDNSPEF 719
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN V+D + +++T+ LTD+NDN P F + I EN G+
Sbjct: 3273 LDYDLIQEYHLNITVRDLGFKSLTDTAILTIILTDVNDNPPVFNQTEYHSYIAENKPTGT 3332
Query: 68 L 68
Sbjct: 3333 F 3333
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I++Y L D PA + + + + D+ND+ P F +A + E A GS
Sbjct: 462 LDREEISKYNLTVVALDGGIPARSATAHLIIDVNDVNDHEPVFEKSEYTAVLSELAPKGS 521
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ + +
Sbjct: 522 FVASIAATDEDTGVNAQIHYEILSGNELKWFTM 554
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A+ L+ E+ ARYTL +D + + V+ +T+++ DINDN P F A ++
Sbjct: 2324 VRVAKNLNYERKARYTLTVRAEDCAIENSASDVAELTISILDINDNRPTFLDSPYLARVM 2383
Query: 61 EN 62
EN
Sbjct: 2384 EN 2385
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F S ++ E
Sbjct: 232 LETTGNLDRESRGYYNLNISARDGGSPPRMGYLQVNVTILDVNDNPPIFDHSDYSVNLNE 291
Query: 62 NAEIGS 67
+ G+
Sbjct: 292 TVQPGT 297
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L AR LDRE + L +D QP + IT+ + D NDNAPEF + S
Sbjct: 1319 QLSLARHLDRESQDLHVLTIVARDAALVQP-LSSNTTITIVVLDENDNAPEFTQSSSEVS 1377
Query: 59 ILENAEIGS 67
+ E + IG+
Sbjct: 1378 VPETSPIGT 1386
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
+ LD E I RY+LN D P+ L + + D NDNAP F S
Sbjct: 1430 KSLDYEDITRYSLNITASDCGTPSLFTTLLYNVLIVDDNDNAPVFPS 1476
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
E+ TA LDRE+ Y L QD +P V+L T+ + D+NDN P+F S
Sbjct: 2535 EITTAALLDREETDTYRLTLMAQDSSITEPRATSVNL-TIKVVDVNDNVPQFDS 2587
>gi|426350328|ref|XP_004042729.1| PREDICTED: protocadherin gamma-C5-like isoform 3 [Gorilla gorilla
gorilla]
Length = 944
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRAPGSL 472
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|73989073|ref|XP_542588.2| PREDICTED: protocadherin-8 isoform 1 [Canis lupus familiaris]
Length = 1072
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 453 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 512
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 513 PPGAYLATVAA 523
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|73989075|ref|XP_857266.1| PREDICTED: protocadherin-8 isoform 3 [Canis lupus familiaris]
Length = 975
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 453 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 512
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 513 PPGAYLATVAA 523
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE + Y L +D P + + ++LTD+NDN P F S S+LE+A
Sbjct: 900 TTRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSVLEDA 959
Query: 64 EIGS----LSTVNATIGVN-RCGHTFRGKD 88
+G+ +S +A +G+N + ++ KD
Sbjct: 960 LVGTSVVQVSATDADVGLNGKISYSLSEKD 989
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A+ DR P +T+ + DIND+ P F S I E
Sbjct: 1004 IRTNKGLDRESVAVYELEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAE 1063
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1064 NSPIGS 1069
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD PA + + + + D+NDNAP F + + SI
Sbjct: 577 DVSLVKPLDYETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQ 636
Query: 61 ENAEIG 66
ENA G
Sbjct: 637 ENAPAG 642
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE +++ D+ P + + +T+ D+NDN P F I + + E
Sbjct: 689 ITTTKELDREDQSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYESVVSE 748
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 749 DDPPGTPVATVTAT 762
>gi|119603651|gb|EAW83245.1| cadherin 1, type 1, E-cadherin (epithelial), isoform CRA_d [Homo
sapiens]
Length = 466
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|268557990|ref|XP_002636985.1| Hypothetical protein CBG09473 [Caenorhabditis briggsae]
Length = 5775
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P E +L+ +T+ D+NDNAP FAS + +ILE
Sbjct: 196 IQTAAPLDRETLSLIRLDVIASDKGIPKKESKALVEITVLDVNDNAPVFASDSYNITILE 255
Query: 62 NAEIGS-LSTVNAT 74
N + + ++TV AT
Sbjct: 256 NITLPTVIATVKAT 269
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LDRE ARY+L +D P + +T+ L DINDNAP F + +I E
Sbjct: 402 IKTTKLLDRETTARYSLKVTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEYNVTISE 461
Query: 62 NAEIGS 67
GS
Sbjct: 462 EMPRGS 467
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ +DRE + ++ L +R P + + + + D+ DN+P F I
Sbjct: 90 EIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIR 149
Query: 61 ENAEIGS 67
E+A IG+
Sbjct: 150 EDAPIGT 156
>gi|403272515|ref|XP_003928104.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Saimiri
boliviensis boliviensis]
Length = 2899
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D +P V + + + D ND++P F + +S+
Sbjct: 1413 ELSTTRALDREQVSNFTLAILCSDLGEPPRSSVIHLQVRVLDANDHSPSFPTPYYQSSVR 1472
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1473 EDAEVGTVVLMLSAVDKDEGLN 1494
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+ PEF + +L
Sbjct: 1309 EVVTTTMLDREVQEVFTLRVLVRDGGVPSLSSTTTILCTVEDENDHTPEFIVFSYNIEVL 1368
Query: 61 ENAEIGSLSTVNAT 74
EN E + TV A+
Sbjct: 1369 ENREPEVVYTVLAS 1382
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + + D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2152 LDREASASHEIAILASDSGCPPLSATAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2211
Query: 68 LSTV 71
TV
Sbjct: 2212 HITV 2215
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1205 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQQLYEASVKE 1264
Query: 62 NAEIGSL 68
N G
Sbjct: 1265 NQNPGEF 1271
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1834 LDYELTSSYSLIVQATDKGMPRLSNTTVIKIQVTDINDNAPAF 1876
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE + Y L +D P + + ++LTD+NDN P F S S+LE+A
Sbjct: 900 TTRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSVLEDA 959
Query: 64 EIGS----LSTVNATIGVN-RCGHTFRGKD 88
+G+ +S +A +G+N + ++ KD
Sbjct: 960 LVGTSVVQVSATDADVGLNGKISYSLSEKD 989
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A+ DR P +T+ + DIND+ P F S I E
Sbjct: 1004 IRTNKGLDRESVAVYELEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAE 1063
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1064 NSPIGS 1069
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD PA + + + + D+NDNAP F + + SI
Sbjct: 577 DVSLVKPLDYETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQ 636
Query: 61 ENAEIG 66
ENA G
Sbjct: 637 ENAPAG 642
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE +++ D+ P + + +T+ D+NDN P F I + + E
Sbjct: 689 ITTTKELDREDQSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYESVVSE 748
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 749 DDPPGTPVATVTAT 762
>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
Length = 8377
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L D+NDN P+F + ++
Sbjct: 1139 ELVVSEALDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDVNDNVPQFPKSFYTIRVM 1198
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 1199 ENNAPGAL 1206
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDREK A + L D P +T+T+ D NDN+P F I SA I EN ++
Sbjct: 2958 KPLDREKHAEHKLILTAVDGGSPPKSGTLNVTVTVLDTNDNSPIFTQEIYSAIINENIKV 3017
Query: 66 GS-LSTVNATI---GVNR-CGHTFRGK-DLRCYNLF 95
GS + TVNAT GVN ++F G+ D + Y +F
Sbjct: 3018 GSNVITVNATDLDEGVNADVEYSFGGELDPQIYEIF 3053
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ +D E+ Y L+ D+ QP W S + + + D+NDN PE S+SI
Sbjct: 2295 EIRVKGNVDFEETELYRLDVQASDKGQPPWTGESRVVIKIQDLNDNEPEVEITSLSSSIP 2354
Query: 61 ENAEIGSL 68
E+++ G++
Sbjct: 2355 EDSKPGTV 2362
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREK +YT+ D +P + +++ ++D+NDN+P+F+ + EN
Sbjct: 6465 TKEDLDREKEKQYTIKIKATDCGKPPLATLKSLSIQISDVNDNSPQFSENPLYVYLTENN 6524
Query: 64 EIGS 67
+IG+
Sbjct: 6525 KIGA 6528
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE AR+TL D +P + IT+ ++D+NDN P + ++ ENA
Sbjct: 1509 RPLDREHTARHTLIITAIDGGKPPKSGILNITVIISDVNDNPPVCDKQKYTVTVKENAPT 1568
Query: 66 GS-LSTVNAT 74
G+ L TVNA+
Sbjct: 1569 GTYLLTVNAS 1578
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE+ +RY + +D +P+ I++ ++D NDN PEF+ + + EN
Sbjct: 7182 TKSQLDREETSRYDITITAKDAGEPSLTSEKTISVYVSDTNDNKPEFSLNPYTFYLTENN 7241
Query: 64 EIGSLSTVNATIGVNRCGHTFRGKDLRCYNLFK 96
G+ V H L YNLF+
Sbjct: 7242 TPGA-----PVFSVQATDHDEGENALISYNLFR 7269
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D +PA + + + + D NDN P F + + I+
Sbjct: 368 DLILKKTLDREQQAVHNLTLTAVDGGKPARSGTASVIVHVLDTNDNKPTFDKSLYNVKIM 427
Query: 61 ENAEIGSL 68
EN+ IGSL
Sbjct: 428 ENSPIGSL 435
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A +TL D P + I + + D+NDNAP F ++
Sbjct: 926 DLILKKPLDREQRAVHTLTLTAVDGGVPTRTGTASIIVRVLDVNDNAPSFDKDTYVVDVM 985
Query: 61 ENAEIGSLST-VNAT 74
EN+ IGSL +NAT
Sbjct: 986 ENSPIGSLVIKLNAT 1000
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK+ Y + D P+ ++ L+D+NDN+P+F+ +LEN G+
Sbjct: 4901 LDREKVPHYEIIVKATDCGDPSLSSFKTFSIELSDVNDNSPQFSHNPLYFYLLENNVAGT 4960
Query: 68 L 68
L
Sbjct: 4961 L 4961
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ ++ L D +P +T+ + D NDN P F+ I I ENA +
Sbjct: 6253 KSLDREQKNKHVLFVTAVDGGRPQRTGTLNVTVLVLDTNDNRPIFSQEIYQVEIRENASV 6312
Query: 66 G-SLSTVNAT 74
G S++ VNAT
Sbjct: 6313 GTSVARVNAT 6322
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K LD E+ Y L+ D+ QP + + + D+NDNAPE S SI
Sbjct: 6356 EIKLKGDLDFEESETYKLDIQASDKGQPPLIGRCRLIIKIKDVNDNAPEIDVKSLSDSIS 6415
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGKDL 89
E+++ L TV A I V GK L
Sbjct: 6416 EDSK---LDTVIALISVTDKDSGLNGKIL 6441
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ +D EK Y L+ H D+ QP + + + D NDN PE S S+
Sbjct: 3061 EISVKGEIDFEKAEVYKLDVHASDKGQPPMNADCRVIIKVLDQNDNLPEIEVTSLSKSVS 3120
Query: 61 ENAEIGSL 68
E+++ G++
Sbjct: 3121 EDSKPGTV 3128
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y ++ D P ++ + ++D+NDN PEF + E
Sbjct: 4109 LVTKNTLDRETVSHYDISVTATDCGDPPLSTSRILNIQVSDVNDNIPEFPHNSLPLYLTE 4168
Query: 62 NAEIG----SLSTVNATIGVNRC--GHTFRG----KDLRCY 92
N G S+S V+ + N H RG KDL +
Sbjct: 4169 NNSPGKSIFSVSAVDKDLNENAAVSYHLIRGEGENKDLTSF 4209
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE Y + +D P++ I + ++D+NDN PEF+ + I EN
Sbjct: 5695 LDRENTPHYDVTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYTFYITEN 5749
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L + LDRE ++ Y + D QP +++ + D+NDN PEF
Sbjct: 3168 LVVKQPLDRESVSHYDILITATDCGQPTLSTFKTVSIDVADVNDNKPEF 3216
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE Y + +D P++ I + ++D+NDN PEF+ + I EN
Sbjct: 7975 LDRENTPHYDVTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYAFYITEN 8029
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 TARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T +G +D EK Y ++ D+ Q + + + D+NDN PE S SI E+
Sbjct: 7864 TVKGQIDFEKSKSYEIDVQASDKGQVPLTSDKSVKINVIDVNDNPPEIEVTSFSNSIKED 7923
Query: 63 AEIGS 67
++IG+
Sbjct: 7924 SKIGT 7928
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ +D E Y L+ D+ QP + + + D+NDN PE S+ +
Sbjct: 4002 EIRVKGHIDYETADVYKLDVQASDKGQPPMTTDCRVIIKVQDVNDNEPEILVTSLSSMVP 4061
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGK 87
E+++ G TV A I V GK
Sbjct: 4062 EDSKHG---TVVALITVKDSDSGVNGK 4085
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE +R+ L D P I + + DINDN P +A++ E
Sbjct: 6966 LRLQKQLDRETKSRHKLVLTAIDGGTPQKSGTLEININVLDINDNMPVLTKDKYTAALRE 7025
Query: 62 NAEIG-SLSTVNAT---IGVN-RCGHTFRGK 87
N+ IG ++ VNAT G+N ++F G+
Sbjct: 7026 NSPIGTTVIQVNATDLDDGINGEVTYSFGGE 7056
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE ++ L D +P I + + D+NDN+P F SA+I EN I
Sbjct: 7759 KQLDRETSEKHKLRLTAVDGGKPVKSGNIDIIVDVLDVNDNSPVFTKETYSATIRENIPI 7818
Query: 66 GSLS-TVNAT 74
+ VNAT
Sbjct: 7819 DTFVIQVNAT 7828
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+ LDREK A + L D P+ +T+ + DINDN P F+ S + ENA
Sbjct: 3901 KQLDREKKANHILILTAVDGGTPSKSAQLNLTVKVLDINDNRPVFSKDTYSVQLQENA 3958
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L T LDRE ++ Y + D +P + + + ++D+NDN P F+
Sbjct: 2402 LVTKGRLDRESVSYYDITIIASDCGKPQLSAIKTLRVQVSDVNDNTPVFS 2451
>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
Length = 3394
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKTA LDRE+ A Y L A Q D C S I+LT+ D+NDNAP FA AS+
Sbjct: 3086 ELKTAALLDRERTAGYMLIA--QATDGGGLFCRSEISLTILDVNDNAPSFAFTRFMASVY 3143
Query: 61 ENAEIGSLST 70
E+A +L T
Sbjct: 3144 ESAAPKALLT 3153
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ RY LN V D P L+T+ + D+NDN+PEF+ +A + ENA IG+
Sbjct: 786 LDRERSDRYLLNITVYDLGIPQRSSWRLLTVNIEDVNDNSPEFSLESYTAVVTENAAIGT 845
Query: 68 ----LSTVNATIGVN 78
++ + +GVN
Sbjct: 846 EVIQVTASDNDLGVN 860
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE ++ Y+L+ D PA + + + D+NDN P F+ SA I
Sbjct: 3270 LKVNKALDRETVSSYSLSVQAFDSGSPAKSTTVNVNIEIADVNDNPPLFSPANASAVIQL 3329
Query: 62 NAEIG 66
N G
Sbjct: 3330 NKPAG 3334
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LD E + ++ D P+ C +T+ L+D+NDN P F + A + E
Sbjct: 2341 LLTARLLDYELTSSFSFIVRATDNGSPSQNCEVTVTVFLSDVNDNPPSFNQPLYEAFVSE 2400
Query: 62 NAEIGSLST 70
A G + T
Sbjct: 2401 LAPRGHIVT 2409
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E + LN D P ++T+ L D+NDN+P F+ I + I E
Sbjct: 3165 ISVADDLDYEICKDFFLNVEAFDGGSPPLRAAIIVTIELLDVNDNSPSFSEEIYNVLISE 3224
Query: 62 NAEIGSLST 70
+ IG T
Sbjct: 3225 DIAIGETVT 3233
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILENAEI 65
LDRE I+ +TL D+ + + S TL L D+ND AP F S +LE+ I
Sbjct: 889 LDRESISDFTLKIQATDKAERGNQMFSETTLRVYLEDVNDCAPVFIPKSYSCRVLEDLPI 948
Query: 66 GS----LSTVNATIG 76
G+ L T + IG
Sbjct: 949 GAVIAWLQTQDPDIG 963
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD E ++ L V+D++ P + ++ I +TL D N+ P F +++ E
Sbjct: 1515 MYTADRLDYEARTQHILTIMVKDQEFPYYRDLARIIVTLEDANNQPPIFTQTNYDSTVFE 1574
Query: 62 NAEIGS 67
+A G+
Sbjct: 1575 SAPPGT 1580
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LDRE + V D + + L D NDNAP F ++ SI
Sbjct: 2547 ITTAQKLDRENPINRDIVLTVMALDGGGRASFCTVRVILADENDNAPRFRAMEYRVSIKA 2606
Query: 62 NAEIGSLST 70
N +GSL T
Sbjct: 2607 NVPMGSLVT 2615
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ Y N V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3077 ELRTLAPLDREEQGVY--NLLVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVF 3134
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN E G+L T V AT G+NR
Sbjct: 3135 ENTEPGTLLTRVQATDRDSGLNR 3157
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3390 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQ 3449
Query: 61 ENAEIG 66
EN +G
Sbjct: 3450 ENKPVG 3455
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1513 LFTSETLDHEAVHQHILTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1572
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1573 SAAVGSV 1579
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 773 LKILSPLDRETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSE 832
Query: 62 NAEIGS 67
+ EI S
Sbjct: 833 DKEINS 838
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE Y L + DR I + + D+NDNAP+ + + I+E
Sbjct: 1090 VETAERLDRESTPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIE 1149
Query: 62 NA 63
N+
Sbjct: 1150 NS 1151
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDN+P F+ +A + E+A
Sbjct: 3292 LDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDA 3347
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDRE Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1618 IKTAKELDRESQVEYDLMVKATDQGNPPMSEIASVRVFITVADNASPKFTSKEYSVEISE 1677
Query: 62 NAEIGS-LSTVNA 73
IGS + TV A
Sbjct: 1678 TVGIGSFVGTVTA 1690
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2345 RTLDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIH 2404
Query: 66 GSLST 70
G T
Sbjct: 2405 GHFVT 2409
>gi|288551124|gb|ADC53120.1| E-cadherin 1 [Homo sapiens]
Length = 882
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
+A G S+ V AT
Sbjct: 274 SALPGTSVMEVTAT 287
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ Y N V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3083 ELRTLAPLDREEQGVY--NLLVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVF 3140
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN E G+L T V AT G+NR
Sbjct: 3141 ENTEPGTLLTRVQATDRDSGLNR 3163
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3396 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQ 3455
Query: 61 ENAEIG 66
EN +G
Sbjct: 3456 ENKPVG 3461
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1513 LFTSETLDHEAVHQHILTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYE 1572
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1573 SAAVGSV 1579
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 773 LKILSPLDRETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSE 832
Query: 62 NAEIGS 67
+ EI S
Sbjct: 833 DKEINS 838
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE Y L + DR I + + D+NDNAP+ + + I+E
Sbjct: 1090 VETAERLDRESTPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIE 1149
Query: 62 NA 63
N+
Sbjct: 1150 NS 1151
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDN+P F+ +A + E+A
Sbjct: 3298 LDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDA 3353
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDRE Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1624 IKTAKELDRESQVEYDLMVKATDQGNPPMSEIASVRVFITVADNASPKFTSKEYSVEISE 1683
Query: 62 NAEIGS-LSTVNA 73
IGS + TV A
Sbjct: 1684 TVGIGSFVGTVTA 1696
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2351 RTLDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIH 2410
Query: 66 GSLST 70
G T
Sbjct: 2411 GHFVT 2415
>gi|410983827|ref|XP_003998238.1| PREDICTED: cadherin-1 [Felis catus]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA+Y L +H + A E I +T+TD NDN PEF + S++E
Sbjct: 212 LKVTEPLDREQIAKYILYSHAVSSNGHAVEDPMEIVITVTDQNDNKPEFTQQVFEGSVME 271
Query: 62 NAEIG-SLSTVNAT 74
+A G S+ V AT
Sbjct: 272 SALPGTSVMQVTAT 285
>gi|403255760|ref|XP_003920579.1| PREDICTED: protocadherin gamma-C5 [Saimiri boliviensis boliviensis]
Length = 879
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPVFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T++ LDRE + Y + D P I L ++D+NDNAP F + +A I EN
Sbjct: 408 TSQPLDREVTSHYIIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYIPENR 467
Query: 64 EIGS-LSTVNAT 74
GS L TV A+
Sbjct: 468 PPGSLLCTVAAS 479
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE + +LE+ +G+
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLTSLANPVLESTPVGT 367
Query: 68 L 68
+
Sbjct: 368 V 368
>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
Length = 1691
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+ R LDRE+ ARYTL DR QP + + IT+ + D NDNAP F AS+ E+
Sbjct: 32 SCRPLDREQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAED 91
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ + +A +GVN
Sbjct: 92 APLGASVVRIKATDADLGVN 111
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT LDRE Y L D P S + + + D+NDN P F N S+ E
Sbjct: 489 VKTNIVLDREIREVYNLKIIATDEGVPQMTGTSTVRVQIVDVNDNQPTFPPN-NLVSVSE 547
Query: 62 NAEIGSLSTVNATIGVN 78
E+G+ V A+I N
Sbjct: 548 ATELGA---VIASISAN 561
>gi|432930277|ref|XP_004081408.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 780
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE+ A YTL+A V DR+ A E + + + DINDNAP+FA I AS+
Sbjct: 103 DIHATKRLDREEKAMYTLHAKVLDRNTNAELEPDTEFNIKIHDINDNAPKFAKEIYFASV 162
Query: 60 LENAEIG-SLSTVNAT 74
E +E+G S+ T+ A+
Sbjct: 163 PEMSEVGTSVVTITAS 178
>gi|296231429|ref|XP_002761146.1| PREDICTED: cadherin-1 isoform 2 [Callithrix jacchus]
Length = 882
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREQIATYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNKPEFTQEVFHGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 274 GALPGTSVMEVSAT 287
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y L+ VQ+ P + + +++T+ DINDNAP F + S SI E
Sbjct: 4797 LYTLGPLDRELQASYFLSVLVQNTAPPYFSTTATVSVTVLDINDNAPIFVAPPMSVSIPE 4856
Query: 62 NAEIGSL 68
NA +G L
Sbjct: 4857 NAPLGLL 4863
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T GLD E++ YTL V DQ +L+ +T+ D+NDN P+FAS + ++
Sbjct: 5729 QLSTEAGLDYEQMQSYTLT--VVAEDQGGLVGTALVYVTVLDVNDNHPQFASSAYAGAVP 5786
Query: 61 ENA 63
ENA
Sbjct: 5787 ENA 5789
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T+R DRE RY QD P+ +T+ + D+NDN P F S +A++
Sbjct: 4188 EIVTSRIFDREVQGRYEFRVIAQDSGTPSLSSTMNVTIIIGDLNDNRPRFTSTEFTAAVP 4247
Query: 61 E--NAEIGS--LSTVNATIGVN 78
E NA + + L+ +A IGVN
Sbjct: 4248 EDINATVPALVLNATDADIGVN 4269
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E Y L VQD P+ ++ + + ++NDNAP F V + + E
Sbjct: 5528 LSLEQSLDYEMRQAYDLTIIVQDSGTPSLSTSMVLRINVGNVNDNAPVFVPVSQTLEVEE 5587
Query: 62 NAEIGSLSTVNAT 74
NAE +L TV AT
Sbjct: 5588 NAEFVTLVTVQAT 5600
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LDRE +A + V D +P + I +T++D+NDNAP FA S + E+
Sbjct: 2334 AKALDRETMAVLRFDVLVTDTGEPPLSNSTSIMITVSDVNDNAPAFADSDISIGVAEDEA 2393
Query: 65 IG----SLSTVNATIGVNRC 80
IG L +A G+N
Sbjct: 2394 IGFALVQLVATDADSGINAA 2413
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF-ASVINSASILENAEIG 66
LDRE ++ + L + D+PA + +I +T+TDINDN PE A+ + + +++E G
Sbjct: 1953 LDRETVSAFNLTLVAFNPDKPASQGRLVIAVTVTDINDNVPEIPAAQLTNINVIEENTTG 2012
Query: 67 SLST---VNATIGVN 78
L T V+A G+N
Sbjct: 2013 VLRTFAPVDADEGIN 2027
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ +D E++ L +QD + P + + +TL + D+NDNAP F + N+ +LE
Sbjct: 2955 LYTSGDVDHEQLTEAPLIIRIQDDNNPLYFADANVTLLIEDVNDNAPVFNNA-NTLDVLE 3013
Query: 62 NAEIG-SLSTVNAT 74
+G +LS +N T
Sbjct: 3014 ELSVGTTLSLLNVT 3027
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E ++ +++N V D PA +++ + + D+NDN+P F + S ++ EN G
Sbjct: 1129 ALDFESLSSFSVNVTVTDMGSPALSTTAILQVMVLDVNDNSPVFPNQTLSETVDENTA-G 1187
Query: 67 SLSTVNAT 74
S++ AT
Sbjct: 1188 SIAFSGAT 1195
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
+ T LD EK+ Y + D P S+ T+ LTD+NDNAP ++
Sbjct: 1647 VTTTAPLDFEKVKAYNITVQATDAGVPPRATTSVFTVELTDVNDNAPALSA 1697
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ R L+RE + D P IT+ LTDINDN P F S+
Sbjct: 3056 ELRVLRRLNRESTDALVIIVTATDGGAPPRSTSQTITIQLTDINDNVPTF------LSLA 3109
Query: 61 ENAEIGSLSTVNATI 75
++G L+ VN T+
Sbjct: 3110 YYEQVGELTPVNTTV 3124
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE LN VQ RD + +T+++ D+NDN P F + S I+EN +GS
Sbjct: 3675 VDREVYP--ILNIMVQARDGGNLTATASVTVSMIDLNDNPPSFPNPNISLGIMENRPVGS 3732
Query: 68 L 68
Sbjct: 3733 F 3733
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
+DRE+ + ++ D+ P+ I++T+TD+NDNAP + A++LEN G
Sbjct: 4089 AIDREEYSALNVSLLATDQGTPSQMSSLPISITVTDVNDNAPTGPATFE-ATVLENQPAG 4147
Query: 67 SL 68
++
Sbjct: 4148 TI 4149
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLIT--LTLTDINDNAPEFASVINSASILEN 62
GLD E R + V RDQ A S +T L + D+NDN P+FA + S+LEN
Sbjct: 3270 GLDYET--RQRVEVTVVARDQGAIFQSSSVTFALIIVDVNDNGPQFAGTTATFSVLEN 3325
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE L V D + + LT+TD+NDNAP F S SI
Sbjct: 4998 ELILLAALDRESFVE--LFVQVSATDVVGNNATARVELTITDVNDNAPVFDLTSYSTSIS 5055
Query: 61 ENAEIGSLSTVNAT 74
E + G+L +V+AT
Sbjct: 5056 E-GQTGALLSVSAT 5068
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQ---PAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+DRE I RY L V D P + S +T+ + D+NDN+P F + + S+ EN
Sbjct: 3886 VDRETIDRYNLTVAVLDAAADAGPLNDTAS-VTVVIGDVNDNSPIFVQGVYNFSVAENTA 3944
Query: 65 ---IGSLSTVNATIGVN 78
IG+++ +A +G+N
Sbjct: 3945 PGVIGNVAATDADLGIN 3961
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL---ITLTLTDINDNAPEFAS 52
LDRE++A Y + V DQPA S + +T+TD+NDN P F S
Sbjct: 1853 LDREQVASY--DVLVTVYDQPAAPRNSAQFRLVVTVTDVNDNVPAFDS 1898
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +A + + D P I + + D+NDNAP F ++ + E+ +G
Sbjct: 4905 LDREALAAFEIMIMAIDAGTPQLSTNITIMINVEDVNDNAPVFEQLVYEYDVPEDLALGP 4964
Query: 68 L 68
+
Sbjct: 4965 M 4965
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA----SVINSASIL 60
A +D E++ LN V D P + +T+ D+NDNAP + SV AS+
Sbjct: 1753 AAPIDYEQVQALALNVLVTDGGVPTRTLPVSLAITVLDVNDNAPMASNASFSVREDASV- 1811
Query: 61 ENAEIGSLSTVNATIGVN 78
NA +G++S +A G N
Sbjct: 1812 -NAVLGTVSVSDADTGSN 1828
>gi|405953857|gb|EKC21435.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 2261
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+TAR L+RE +YTLN VQ DQ + +T+ + D+NDN P F + S+
Sbjct: 537 ELRTARRLNREGTPQYTLNIQVQ--DQSGLTAQTTLTIIVQDVNDNNPVFIPTSYTFSVF 594
Query: 61 E---NAEIGSLSTVNATIGVN 78
E N +G+++ ++ G N
Sbjct: 595 EGRTNEPVGTVTATDSDTGAN 615
>gi|296231427|ref|XP_002761145.1| PREDICTED: cadherin-1 isoform 1 [Callithrix jacchus]
Length = 902
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREQIATYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNKPEFTQEVFHGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 274 GALPGTSVMEVSAT 287
>gi|109506494|ref|XP_001056051.1| PREDICTED: protocadherin beta-11 [Rattus norvegicus]
gi|109507205|ref|XP_001065373.1| PREDICTED: protocadherin beta-11 [Rattus norvegicus]
gi|149017306|gb|EDL76357.1| rCG49392 [Rattus norvegicus]
Length = 802
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D+ P IT+ ++DINDNAP F + + E
Sbjct: 403 LETERALDRENRAEYNITISVSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E+ +L D P+ +L+ + + D NDN+PEF + I
Sbjct: 193 ELVLDKVLDYEEQPELSLILTALDGGTPSRSGTALVQVEVIDANDNSPEFDQMFYEVRIP 252
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 253 ENSRLGSL 260
>gi|195129685|ref|XP_002009286.1| GI13952 [Drosophila mojavensis]
gi|193920895|gb|EDW19762.1| GI13952 [Drosophila mojavensis]
Length = 2436
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+++ Y LN V D QP ++ +T+TD NDN P + + +
Sbjct: 824 ELQIIGYLDRERLSEYILNLTVYDLGQPTKSDSKILPITITDANDNPPILQKSLATLRLA 883
Query: 61 ENAEIGS----LSTVNATIGVN 78
ENA IG+ L +A +G+N
Sbjct: 884 ENAPIGTIVYCLHATDADLGIN 905
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK +++ L A V+D+ P + + + + D ND+ PEF + I + + E+A IGS
Sbjct: 1566 LDFEKTSQHILIAFVKDQGTPGKRNYAKLIVNVHDHNDHPPEFTAKIIQSKVPESAAIGS 1625
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T R LDRE A + L + D P + + +++ DINDN+P F
Sbjct: 1249 TERKLDRENQAEHILEISISDNGSPILTSTTRVVVSVLDINDNSPVF 1295
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+KT +D E + R YTL D P + + + + +INDN P+F V +
Sbjct: 559 IKTTNLIDYETMQRNYTLLVRASDWGLPYRRQTEIALDIIVRNINDNRPQFERVNCHGKV 618
Query: 60 LENAEIGS----LSTVNATIGVNRCGHTFRGKDLRCYNL 94
+++A IGS +S V+ +G + G + C+NL
Sbjct: 619 IKSAPIGSEVFTISAVDLDVGDVISYRSISGNEDGCFNL 657
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L T + LD EK + YTL A V R Q + + + +T+ D+NDN P F ++ +
Sbjct: 453 LYTQKHLDAEKKSTYTLTVSAIDQADVGSRKQSS----AKVKITIDDMNDNDPIFENINS 508
Query: 56 SASILENAEIGSLSTVNAT 74
+ I EN E+ L V T
Sbjct: 509 TIEISEN-ELAGLFVVKLT 526
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE Y L V DR P +++ +T+TD NDNAP F+S A + EN+++G
Sbjct: 2522 ALDRETTESYALTVSVSDRGMPPLNSSTVVMVTVTDCNDNAPVFSSTEYHAQVSENSQLG 2581
Query: 67 S 67
+
Sbjct: 2582 T 2582
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE D +PA + +T+ + D+NDN P F + + SILE
Sbjct: 508 VTTAAALDRETQMEIWFLVVAVDGGEPALSSTATVTVLVEDVNDNEPVFEQQLYNVSILE 567
Query: 62 NAEIGS 67
+++GS
Sbjct: 568 QSDVGS 573
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ ++++L V D+ P + + + + DINDNAP+F
Sbjct: 1146 ALDREQYSQHSLKVMVTDQGHPRLNATATVHILIADINDNAPQF 1189
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ +TL +D + + ++ D NDN PEF S+ E
Sbjct: 1677 ITTTSYLDREQQQHFTLRVQARDSSARPLSSTTTVMCSVLDDNDNPPEFMQSSFRISLPE 1736
Query: 62 NAEIGSLSTV---------NATIGVNRCGHTFRGK 87
N G + T N TI + G +RG+
Sbjct: 1737 NLAPGVIHTAQASDPDHGENGTIHYSILGEDYRGR 1771
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ YTL +D + + L L D NDN P F ASI E
Sbjct: 1781 ISTTQVLDREETQNYTLTIQARDYGPTPLSSFTQLHLVLLDQNDNIPSFTRKSYHASISE 1840
Query: 62 ----NAEIGSLSTVNATIGVN 78
AE+ +S ++ G N
Sbjct: 1841 GLAAGAEVLRVSALDPDEGSN 1861
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWE---CVSLITLTLTDINDNAPEFASVINSAS 58
L A LDRE + D + E L L D+NDN P F S ++A
Sbjct: 1465 LTVAAPLDRESTPSFAFTVTATDEAKEKNERKQASVTAQLFLLDVNDNRPVFVSA-DTAQ 1523
Query: 59 ILENAEIGSL 68
++E+AE+GSL
Sbjct: 1524 VMEDAEVGSL 1533
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L D+ P+ +T+ + D+ND AP F+ I +A++ EN + G
Sbjct: 1578 LDYETERFHRLTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTATVAENRDPG 1636
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAP 48
++T R LDRE A+Y+L A D Q ++ +T+ + D+NDN P
Sbjct: 1886 IRTTRSLDRESRAQYSLRAVATDGCTQGPLSSLASVTIQVEDVNDNMP 1933
>gi|390477837|ref|XP_003735371.1| PREDICTED: cadherin-1 [Callithrix jacchus]
Length = 877
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 209 LKVTEPLDREQIATYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNKPEFTQEVFHGSVME 268
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 269 GALPGTSVMEVSAT 282
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2723 EIRSIRPLDREKVSHYMLTVKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2781
Query: 61 ENAEIGSL----STVNATIGVN 78
EN+ +G + +T + IG N
Sbjct: 2782 ENSPLGYIVTRVTTSDEDIGTN 2803
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPHYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P V+ I ++L D+NDN+P F V A I E
Sbjct: 640 LSTISSLDREEQAFYSLLVLATDLGTPPQSSVAQINVSLLDMNDNSPVFYPVQYFAHIQE 699
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 700 NEPGGSYITTVSAT 713
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QPA + + + + DINDN P FA + I
Sbjct: 2104 EVRLTGELDREEVSNYTLMVVATDKGQPALSSSTEVVVMVLDINDNNPVFAQALYKVEIN 2163
Query: 61 ENAEIGS 67
E+ G+
Sbjct: 2164 EDTLTGT 2170
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQD-RDQPAWEC-----VSLITLTLTDINDNAPEFASVIN 55
+K A LDRE+I Y L V D P E V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNHGAPPAEVQARSSVASLVIFVNDINDHPPVFAQQVY 479
Query: 56 SASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 RVNLSEEAPPGSYVSGVSATDG 501
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA + + + D+NDN P FAS + +I
Sbjct: 2314 ELRVTQSLDRETKEHFVLVITATDSGFPALTGTGTVNVIVDDVNDNVPTFASKMYFTTIP 2373
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2374 EDAPTGT 2380
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 2619 QVSISQPLDFEKIQKYLVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEIL 2678
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2679 ENLSPRKILTVSA 2691
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1374 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1433
Query: 65 IGS 67
IG+
Sbjct: 1434 IGT 1436
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + +T+ +TDINDNAP F+ E +
Sbjct: 2829 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELTD 2885
Query: 65 IGS 67
IGS
Sbjct: 2886 IGS 2888
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y LN V + V + +T+ D+NDN+P F + S +++
Sbjct: 846 QLTTASVIDREEQSFYQLNV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVV 902
Query: 61 ENAEIG 66
EN + G
Sbjct: 903 ENWQAG 908
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1794 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPKFSRPVYSFDIP 1850
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1851 EDTTPGSL 1858
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 1999 LKVLKALDRESQSFYNLVVQVHDLPQVPASRFTSTAQVSIILLDVNDNPPTFLS 2052
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 744 ISTKMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 803
Query: 62 NAEIG 66
N +G
Sbjct: 804 NVALG 808
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ + LDREK A Y L DR S +++ L D+ND P F
Sbjct: 2210 ITVVKPLDREKTATYLLTVQAADRGSTPRTDTSTVSIVLLDMNDFVPTF 2258
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3565 LSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3616
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LD E ++ + D A +T+T+ D+NDN+P F ++LE
Sbjct: 3145 LTLAKALDYELCQKHEITISATDGGWVARTGYCSVTITVIDVNDNSPVFVPDEYFPTVLE 3204
Query: 62 NAEIGS 67
NA G+
Sbjct: 3205 NAPSGT 3210
>gi|57528890|ref|NP_001009588.1| protocadherin 2 alpha b 1 precursor [Danio rerio]
gi|53748788|dbj|BAD52305.1| cadherin-related neuronal receptor variable 1 [Danio rerio]
gi|53748802|dbj|BAD52318.1| cadherin-related neuronal receptor variable 1 [Danio rerio]
gi|190339946|gb|AAI63539.1| Protocadherin 2 alpha b 1 [Danio rerio]
gi|190339964|gb|AAI63541.1| Protocadherin 2 alpha b 1 [Danio rerio]
Length = 941
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + +Y + +D P+ V +I + ++D+NDNAP FA+ + A + EN+ +G+
Sbjct: 411 LDRENVTQYNVTVIAEDEGSPSMSRVKVIRVEVSDVNDNAPRFANSVEYAYLRENSNVGT 470
Query: 68 L 68
+
Sbjct: 471 V 471
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK R D PA +I + + DIND+AP F+ + S+
Sbjct: 191 ELVLQKALDREKTPRLEFTVTAFDGGSPARTGTVIIEVNVLDINDHAPVFSKTLYKVSVA 250
Query: 61 ENAEIGS 67
E+A +G+
Sbjct: 251 EHALVGT 257
>gi|432933151|ref|XP_004081830.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 1021
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I Y L +D P ++ T+ L D NDNAP FA + ++EN
Sbjct: 463 TAAALDRERIREYNLTVMAEDFGSPPLRKITQFTIRLNDENDNAPHFAKAVYEVPVVENN 522
Query: 64 EIGS-LSTVNAT 74
G+ ++TV A+
Sbjct: 523 APGAYITTVEAS 534
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + Y + D P S IT+ +TD NDN+P F S S+
Sbjct: 241 ELVLMKELDRETQSFYNVELVATDGGNPYRSGSSKITVKVTDFNDNSPVFDQNSFSVSLP 300
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ L+ V+A G+N
Sbjct: 301 EDAPPGTVILDLNAVDADEGLN 322
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 1 ELKTARGLDREKIARYT----LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
EL +DRE+I R+T + V + + ++ + + + + DINDN+PEF S
Sbjct: 129 ELSVGERIDRERICRHTPQCLITFDVVNFSKDRYKLIH-VEVEIKDINDNSPEFPSKEYM 187
Query: 57 ASILENAEIGSL----STVNATIGVN 78
I ENA +GS V+A +G N
Sbjct: 188 VEISENAALGSRIPLDPAVDADVGSN 213
>gi|410989769|ref|XP_004001131.1| PREDICTED: protocadherin beta-8 [Felis catus]
Length = 798
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ L QD P ++ I + + DINDNAPEF + I
Sbjct: 193 ELVLDKALDREQEPELRLTLTAQDGGSPPRSGIAQINIEVVDINDNAPEFEQSLYRVKIP 252
Query: 61 ENAEIG----SLSTVNATIGVN 78
E++ IG ++S +A IGVN
Sbjct: 253 EDSPIGFLIVTVSATDADIGVN 274
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F+ + + E
Sbjct: 403 LVTERPLDRESQAEYNITITVTDLGTPRLKTQLNITVKVSDVNDNAPAFSQTTYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGAN 483
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y +N +D + +C L + D+NDNAPE + I
Sbjct: 300 EIRLKKQLDFERIQFYEVNIEARDSGSFSGKCTVLTQVL--DVNDNAPEITMSAFTRHIP 357
Query: 61 ENA 63
EN+
Sbjct: 358 ENS 360
>gi|326673365|ref|XP_003199859.1| PREDICTED: protocadherin gamma-A7-like [Danio rerio]
Length = 786
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + RY + +D QP V IT+ ++D+NDN+P+F+ + + E
Sbjct: 392 LVTASSLDRESVPRYDITLLAKDAGQPPLSSVKTITVQVSDVNDNSPQFSLSPYAFYVFE 451
Query: 62 NAEIGSL 68
N G L
Sbjct: 452 NNIAGKL 458
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE ++ L D +P I + + D+NDN P F + S ++ EN +
Sbjct: 182 KPLDRETSRKHKLVLTALDGGRPPKSGTMEIIVDVLDVNDNMPVFTQEVYSVTLKENVPV 241
Query: 66 G-SLSTVNAT-IGVNRCGHTFR--GKDL--RCYNLF 95
G ++ VNAT + G F GKD+ R LF
Sbjct: 242 GTTVIQVNATDMDDGPNGEVFYSFGKDIDSRLTKLF 277
>gi|441619416|ref|XP_003257906.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Nomascus
leucogenys]
Length = 2917
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1430 ELSTTRALDREQVSNFTLAILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSMR 1489
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1490 EDAEVGTVVLVLSAVDKDEGLN 1511
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF IL
Sbjct: 1326 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEIL 1385
Query: 61 ENAEIGSLSTVNAT 74
EN E + TV A+
Sbjct: 1386 ENQEPEVVYTVLAS 1399
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2169 MDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2228
Query: 68 LSTV 71
TV
Sbjct: 2229 HITV 2232
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1222 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1281
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1282 NRNPGEFVT 1290
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E + Y+L D+ P ++I + +TDINDNAP F + + I E
Sbjct: 1845 ITTKAMLDYELTSTYSLIVQATDKGIPRLSNTTIIKVQVTDINDNAPAFLTS-EAVEIAE 1903
Query: 62 NAEIGSLST 70
++ G + T
Sbjct: 1904 DSLPGVIVT 1912
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 791 ELINWVALDREHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 840
>gi|6682963|dbj|BAA88957.1| E-cadherin [Homo sapiens]
Length = 901
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|195325648|gb|ACF95732.1| protocadherin-8 [Mustela putorius furo]
Length = 569
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ ++D NDNAP F + S+ EN
Sbjct: 446 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENN 505
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 506 PPGAYLATVAA 516
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 196 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 255
Query: 67 SL 68
SL
Sbjct: 256 SL 257
>gi|340185|gb|AAA61259.1| uvomorulin [Homo sapiens]
Length = 878
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 210 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 269
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 270 GALPGTSVMEVTAT 283
>gi|197102534|ref|NP_001127374.1| cadherin-1 precursor [Pongo abelii]
gi|75070747|sp|Q5RAX1.1|CADH1_PONAB RecName: Full=Cadherin-1; AltName: Full=Epithelial cadherin;
Short=E-cadherin; AltName: Full=Uvomorulin; AltName:
CD_antigen=CD324; Contains: RecName: Full=E-Cad/CTF1;
Contains: RecName: Full=E-Cad/CTF2; Contains: RecName:
Full=E-Cad/CTF3; Flags: Precursor
gi|55728699|emb|CAH91089.1| hypothetical protein [Pongo abelii]
Length = 882
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|403290603|ref|XP_003936401.1| PREDICTED: cadherin-1 [Saimiri boliviensis boliviensis]
Length = 922
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 293 LKVTEPLDREQIATYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQEVFHGSVME 352
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 353 GALPGTSVMEVSAT 366
>gi|31075|emb|CAA79356.1| E-cadherin [Homo sapiens]
Length = 882
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
Length = 4614
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK AR LDRE+ + YTL D P ++I + ++DINDN P F+ S I
Sbjct: 3393 ELKVARQLDRERTSGYTLTVVASDNGAPPLSSSAMINIDISDINDNPPLFSQANYSLIIQ 3452
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3453 ENRPAGT 3459
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT++ LDRE+ Y+ V+ D C S I + + D+NDN P+F+S + ++
Sbjct: 3081 ELKTSQPLDREEKDEYSFK--VRAVDGGGRYCESDIHIIVEDVNDNPPQFSSDPYTITVF 3138
Query: 61 ENAEIGSL 68
EN E G+
Sbjct: 3139 ENTETGTF 3146
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + R+ L V+D+D P + + + + D NDNAP F S + E
Sbjct: 1515 LYTTERLDHETMHRHILTVMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFIGTPYSGRVFE 1574
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1575 SAAVGT 1580
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LD E+I ++ L V D PA ++T+ +TD+NDNAP F +I E
Sbjct: 2343 ISTAQVLDHEEIQQHKLRVRVVDGGVPALSSDIIVTIDVTDLNDNAPVFTEHTYRTTISE 2402
Query: 62 NAEIGS-LSTVNAT 74
A G +S V A+
Sbjct: 2403 LAPRGHFVSQVQAS 2416
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE + Y L A D+ P + + +++ DINDN P F +A++ E+ +
Sbjct: 3188 RPLDREVQSVYELKARASDQGSPRLSSLCQVVISVLDINDNPPVFEHREYTATVSEDVAV 3247
Query: 66 GS 67
G+
Sbjct: 3248 GT 3249
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y + D P ++ + + LTD+NDN P F+ + +A I E+AE+G
Sbjct: 3295 LDYEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVISEDAELG- 3353
Query: 68 LSTVNATIGVNRCGHTF 84
TV A + + G +
Sbjct: 3354 -KTVMAVMAEDFDGPAY 3369
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTLN V D P L+ + + D NDN+P+F S I E+ +G+
Sbjct: 779 LDRETADHYTLNITVYDLGIPQKSSSRLLDVKILDANDNSPQFLQESYSVEITESTPVGT 838
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L + DR + + + D+NDNAP+ + + S++E
Sbjct: 1090 IRTQELLDRETTSHYWLTVYAMDRGVVPLSAFVEVYIEVQDVNDNAPQTSEPVYYPSVME 1149
Query: 62 NA 63
N+
Sbjct: 1150 NS 1151
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE + + V DQ + L+T+T+ DINDNAP F ++ A + +A
Sbjct: 2036 TGIPFDREAQDTFDIVVEVTREDQSEDKAHVLVTVTVEDINDNAPMFVNLPYHALVQVDA 2095
Query: 64 EIG----SLSTVNATIGVN 78
E G ++ V+ IG N
Sbjct: 2096 EEGQVIRQVTAVDKDIGPN 2114
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLIT-----LTLTDINDNAPEFASVINS 56
+ T + LDREK +Y ++ D+ E V LIT +T+ D+NDN P F + I
Sbjct: 2871 VTTLKELDREKTDKYKISILATDQ----GEKVQLITGTTVEVTVGDVNDNPPRFTAEIYK 2926
Query: 57 ASILEN 62
++ E+
Sbjct: 2927 GTVSED 2932
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA ++ + +++ L+ D+ A V +I D+N+NAPEF AS+ E
Sbjct: 419 ISTAGPINADISSQFQLDVITSDKKAAAKVIVDVI-----DVNNNAPEFQQTSYKASVDE 473
Query: 62 NAEIG-SLSTVNAT 74
N IG S+ TV AT
Sbjct: 474 NVPIGTSVVTVKAT 487
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE + + +D A S++ + LTD NDNAP+F + A+I
Sbjct: 2548 EIFTLESLDRENTEEKVIPISLMAKDGGAKVGFSIVNVILTDANDNAPQFRAGEYKATIA 2607
Query: 61 ENAEIGS 67
+ G+
Sbjct: 2608 SDVPRGT 2614
>gi|292618187|ref|XP_002663586.1| PREDICTED: protocadherin alpha-2 [Danio rerio]
Length = 794
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F +++ +A + EN++ G
Sbjct: 406 LDRESVSQYNITITAADEGTPPLSSSTVITVRISDVNDNAPHFPALVINAFLSENSQAGG 465
Query: 68 LST 70
L T
Sbjct: 466 LVT 468
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE I Y L A+ +D+ QP + I +T+ D+NDNAP+F S + E
Sbjct: 1021 IRTDKRLDRELIPVYNLVAYAEDQGQPEQKTPVDIIVTIEDVNDNAPQFPSDTIDIYVPE 1080
Query: 62 NAEIGSL 68
N +GS+
Sbjct: 1081 NRVVGSV 1087
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E RY L QD +P+ ++T+++ D+ND+ P+F S S+ E+ +G
Sbjct: 612 LDFESTPRYRLIVKAQDSGRPSMWSSVVLTVSVIDVNDHDPQFVSTPFETSVFEDVRVG 670
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE A Y N D+ PA + +++ + D+NDNAP F + ++ E+A G
Sbjct: 717 LDREAHAIYDFNVQAADQGSPARTAAARVSINILDVNDNAPVFNPKVYYINVPEDANPGT 776
Query: 67 SLSTVNA 73
S+ TV A
Sbjct: 777 SVLTVTA 783
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE + R+ +D P + + + + D+ND+ PEF ++L
Sbjct: 394 EVTTQEVLDREDMNRHFFRVTARDNGSPPRSATATLQIDILDMNDHDPEFEENSYREAVL 453
Query: 61 ENAEIGS-LSTVNAT---IGVN 78
E EIGS + TV AT IG N
Sbjct: 454 EGIEIGSNVLTVRATDQDIGPN 475
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE A Y L D+ P ++T+T+ D NDN P+F + + E
Sbjct: 501 ITTTEALDRETTASYRLEVRASDQGTPPRTSDVVVTITVLDENDNEPQFEQQSYAKDVPE 560
Query: 62 NAEIGS-LSTVNAT 74
N + + TV AT
Sbjct: 561 NVRPDTVIQTVAAT 574
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LD E A + ++ D P+ S + + + D+NDNAP F S S+ E
Sbjct: 915 IKTKQRLDHEAQASFAVSVTATDHGVPSKFDESYVDIIVNDVNDNAPVFLLESYSGSVRE 974
Query: 62 NAEIGS----LSTVNATIGVN-RCGHTFRGKD 88
+ G+ +S +A G N + +TF G D
Sbjct: 975 DCSRGTSVTQISATDADSGTNGQIRYTFTGGD 1006
>gi|426382660|ref|XP_004057921.1| PREDICTED: cadherin-1 isoform 2 [Gorilla gorilla gorilla]
Length = 821
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + IT+ + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDITIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVIGILDVNDNPPVFS 1243
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEVTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGKLVVTLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCTVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
>gi|146327038|gb|AAI41839.1| CDH1 protein [Homo sapiens]
gi|148921649|gb|AAI46663.1| CDH1 protein [Homo sapiens]
Length = 647
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|114663334|ref|XP_001168121.1| PREDICTED: cadherin-1 isoform 1 [Pan troglodytes]
Length = 821
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|6682961|dbj|BAA88956.1| E-cadherin [Homo sapiens]
gi|119603650|gb|EAW83244.1| cadherin 1, type 1, E-cadherin (epithelial), isoform CRA_c [Homo
sapiens]
Length = 821
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|930046|emb|CAA31279.1| uvomorulin (140 AA) [Homo sapiens]
Length = 140
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 43 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 102
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 103 GALPGTSVMEVTAT 116
>gi|114663332|ref|XP_001168150.1| PREDICTED: cadherin-1 isoform 2 [Pan troglodytes]
Length = 882
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|4757960|ref|NP_004351.1| cadherin-1 preproprotein [Homo sapiens]
gi|399166|sp|P12830.3|CADH1_HUMAN RecName: Full=Cadherin-1; AltName: Full=CAM 120/80; AltName:
Full=Epithelial cadherin; Short=E-cadherin; AltName:
Full=Uvomorulin; AltName: CD_antigen=CD324; Contains:
RecName: Full=E-Cad/CTF1; Contains: RecName:
Full=E-Cad/CTF2; Contains: RecName: Full=E-Cad/CTF3;
Flags: Precursor
gi|31073|emb|CAA78353.1| E-cadherin [Homo sapiens]
gi|67515435|gb|AAY68225.1| cadherin 1, type 1, E-cadherin (epithelial) [Homo sapiens]
gi|119603649|gb|EAW83243.1| cadherin 1, type 1, E-cadherin (epithelial), isoform CRA_b [Homo
sapiens]
gi|158261047|dbj|BAF82701.1| unnamed protein product [Homo sapiens]
gi|189069110|dbj|BAG35448.1| unnamed protein product [Homo sapiens]
Length = 882
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|440909070|gb|ELR59020.1| Protocadherin Fat 3, partial [Bos grunniens mutus]
Length = 3373
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S + LTL D+NDN P F+S +A +
Sbjct: 1862 ELKTLAPLDRERVPAYSLIARATDGG--GRFCQSDVRLTLEDVNDNPPVFSSDHYNACVY 1919
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +GVNR
Sbjct: 1920 ENTATKALLTRVQAVDPDVGVNR 1942
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 2176 VKVKKKLDRERVSGYSLLVQAVDSGMPAMSSTATVNIDISDVNDNSPVFTPANATAVIQE 2235
Query: 62 NAEIGS 67
N +G+
Sbjct: 2236 NKPVGT 2241
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LD E ++ L +D PA V+ + + LTD+NDN PEF+ + SA I E
Sbjct: 2071 ISVSEALDYELCRKFYLVVEAKDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISE 2130
Query: 62 NAEIG 66
+A +G
Sbjct: 2131 DALVG 2135
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ L+ V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 296 LYTAERLDHEAQDKHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 355
Query: 62 NAEIGS 67
+A +GS
Sbjct: 356 SAALGS 361
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 1126 TARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELA 1185
Query: 64 EIGSLST 70
G T
Sbjct: 1186 PRGHFVT 1192
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 611 IRTIASLDHEAIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETIL 670
Query: 60 LENAEIG 66
L +G
Sbjct: 671 LLPTYVG 677
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
R LDRE+ + YTL D+ A ++ I++T+ D+NDN P F S+ E+
Sbjct: 1969 RPLDREQQSSYTLRVQATDQSPGQALSSLATISITVLDVNDNPPVFERRDYLVSVPEDTS 2028
Query: 65 IGS 67
G+
Sbjct: 2029 PGT 2031
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 1653 ISTLKDLDHETDPMFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAHEVYRGNVK 1712
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 1713 ESDPPGEVVAVLST 1726
>gi|426252195|ref|XP_004019801.1| PREDICTED: protocadherin Fat 3 [Ovis aries]
Length = 4477
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S + LTL D+NDN P F+S +A +
Sbjct: 3083 ELKTLAPLDRERVPAYSLIARATDGG--GRFCQSDVRLTLEDVNDNPPVFSSDHYNACVY 3140
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +GVNR
Sbjct: 3141 ENTATKALLTRVQAVDPDVGVNR 3163
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LD E ++ L +D PA V+ + + LTD+NDN PEF+ + SA I E
Sbjct: 3292 ISVSEALDYESCRKFYLVVEARDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISE 3351
Query: 62 NAEIG 66
+A +G
Sbjct: 3352 DALVG 3356
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D P + + + ++D+NDN+P F +A I E
Sbjct: 3397 VKVKKKLDRERVSGYSLLIQAVDSGMPPMSSTATVNIDISDVNDNSPVFTPANATAVIQE 3456
Query: 62 NAEIGS 67
N +G+
Sbjct: 3457 NKPVGT 3462
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ L+ V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1517 LYTAERLDHEAQDKHILHVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1576
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1577 SAALGS 1582
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 781 QLQVLMPMDREHRDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPIFIQDSYSVNIL 840
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 841 ESSSIGT 847
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 888 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 947
Query: 63 AEIGSL 68
+G++
Sbjct: 948 LPVGTV 953
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 2347 TARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELA 2406
Query: 64 EIGSLST 70
G T
Sbjct: 2407 PRGHFVT 2413
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1832 IRTIANLDHEAIAHFLFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1891
Query: 60 LENAEIG 66
L +G
Sbjct: 1892 LLPTYVG 1898
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++T+TDINDNAP FA + ++
Sbjct: 2874 ISTLKDLDHETDPVFTFSVVASDLGEAFSLSSTALVSVTVTDINDNAPVFAHEVYRGNVK 2933
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2934 ESDPPGEVVAVLST 2947
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVINSASILENA 63
R LDRE+ + YTL D+ P SL T+++T D+NDN P F S+ E+
Sbjct: 3190 RPLDREQQSSYTLRVRATDQ-SPGRALSSLATVSITVLDVNDNPPVFERRDYLVSVPEDT 3248
Query: 64 EIGS 67
G+
Sbjct: 3249 SPGT 3252
>gi|301753533|ref|XP_002912596.1| PREDICTED: protocadherin beta-16-like [Ailuropoda melanoleuca]
Length = 796
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ A+Y + V D P + +T+T++D+NDNAP F+ + + E
Sbjct: 403 LVTERALDREERAQYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDAGAN 483
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE L D P + + + + D NDNAPEF I I
Sbjct: 193 ELVLEEELDREVEPEIVLTLTALDGGSPPRYGTAQVLIEVVDSNDNAPEFGQPIYKVHIP 252
Query: 61 ENAEIGSL-STVNAT 74
EN+ +GSL TV+A+
Sbjct: 253 ENSPVGSLVVTVSAS 267
>gi|194219783|ref|XP_001504040.2| PREDICTED: protocadherin gamma-C5-like [Equus caballus]
Length = 944
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++T+ DINDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGIPAHSGTTLISVTVLDINDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPMGTLLLRLNAT 267
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPPLHAHLTIRLNISDVNDNAPFFTQQLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NQPPGSLLCTVAAS 479
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N +LEN +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDDNDNAPEVLLASLVN--PVLENTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+ LDRE + Y L +D P+ + + +++TD+NDNAP F + + ASILE+A
Sbjct: 958 TSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQASILEDA 1017
Query: 64 EIGS----LSTVNATIGVN 78
+G+ +S + IG+N
Sbjct: 1018 LVGTSVIQVSASDPDIGLN 1036
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1062 IRTNKGLDRESVATYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1121
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1122 NSPVGSV 1128
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 743 VQTIKPLDREEQNRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGE 802
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 803 DQPPGTPVTTVTAT 816
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 637 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 696
Query: 61 ENAEIG 66
EN +G
Sbjct: 697 ENVPVG 702
>gi|417405118|gb|JAA49284.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 887
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE I +YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 219 LKVTKPLDREAIPKYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQPVFEGSVME 278
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 279 GALPGTSVMQVTAT 292
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE I YTL D + +T+TDINDN P F + EN
Sbjct: 336 GLDRENITTYTLLVQAADLQGEGLSTTATAVITVTDINDNPPIFDPHTYQGQVPENEANA 395
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 396 VITTLKVT 403
>gi|189310876|gb|ACD87624.1| truncated E-cadherin [Homo sapiens]
Length = 758
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
Length = 4521
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + IT+ + D+NDN P F + S ++
Sbjct: 3552 ELQVAKALDWEQTSSYSLRLRATDSGQPPLHEDTNITVQVVDVNDNPPRFFQLNYSTTVQ 3611
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3612 ENSPIGS 3618
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 912 LTVAAPLDYETTSFYVLNITVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 971
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 972 DTEVGT 977
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E + D QP +L+ +++TD NDNAP FAS S++
Sbjct: 3038 ITTLQELDCETHQTHRFYVVAYDHGQPTQLSSQALVEVSITDENDNAPRFASEDYRGSVI 3097
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 3098 ENSEPGELVATLKTLDADI 3116
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ Y+L A D C + +TL + D+NDNAP F + ++
Sbjct: 3241 ELTTLTALDRERKDTYSLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCTVAVF 3298
Query: 61 ENAEI 65
+N +
Sbjct: 3299 DNTTV 3303
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LD E +Y L+ + + ++ I + +TD+N+ P F + +LE
Sbjct: 3448 LYVNRSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNITDVNEYRPRFPQELYDTRVLE 3507
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT +G N+ GH
Sbjct: 3508 NAIVGDIILTVSATDEDGPLNSAITYSLVGGNQLGH 3543
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L D+ V+ + + + D+NDN P + + SILE
Sbjct: 1229 IQTMAPLDREFASYYWLTVLAVDKGSVPLSSVTEVYIEVMDVNDNPPRMSRPVFYPSILE 1288
Query: 62 NAEIGS 67
+A G+
Sbjct: 1289 DAPSGT 1294
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
DRE+ +T+ V+D P +++ +++ D+NDN P+F + I + E G
Sbjct: 2206 AFDRERQDTHTVAVEVRDNRAPQRVAQAMVRISVKDVNDNPPKFKHLPYYTIIQDGTEPG 2265
Query: 67 ----SLSTVNATIGVN 78
+S + +G N
Sbjct: 2266 DVLFQVSATDEDLGAN 2281
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP+ V+ + +TL D NDN+P+ + +S
Sbjct: 1014 ELVVTGHLDRESEPQYILK--VEARDQPSKGHQLFSVTDLLVTLEDANDNSPQCITEHSS 1071
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 1072 LKVPEDLPPGTILT 1085
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
L R LD EK A Y L+ D +P A + + + + D+N+N P FAS ++
Sbjct: 1121 LSLERELDFEKQAGYNLSLWASDGGRPLARRTLCHVEVIVLDVNENLHPPHFASFVHQGQ 1180
Query: 59 ILENAEIGS 67
+ EN+ G+
Sbjct: 1181 VQENSPSGT 1189
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 3 KTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
K G + +A + + VQD +P+ + S + + + D+NDN P F+
Sbjct: 1374 KAGLGATGKSLALWLMKVTVQDNGEPSLKSTSRVVVRILDVNDNPPTFS 1422
>gi|426382658|ref|XP_004057920.1| PREDICTED: cadherin-1 isoform 1 [Gorilla gorilla gorilla]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
AR LDRE+++ Y L D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 333 ARELDREQVSEYNLTVQAADGGSPALWSSAVLRLRVLDVNDNAPVFAEARYSARVPENNA 392
Query: 65 IGSL 68
G+L
Sbjct: 393 AGAL 396
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+++ Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 979 TARELDREQVSEYNVTVRAVDGGSPALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENN 1038
Query: 64 EIGSL 68
G+L
Sbjct: 1039 AAGAL 1043
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+++ Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 660 TARELDREQVSEYNVTVRAADGGSPALCSSAVLWLRVLDVNDNAPVFAEARYSARVPENN 719
Query: 64 EIGSL 68
G+L
Sbjct: 720 AEGAL 724
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+R LDRE+++ Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 2914 TSRELDREQVSEYNVTVRATDGGSPALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENN 2973
Query: 64 EIGS 67
+G+
Sbjct: 2974 AVGA 2977
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+++ Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 2484 TARELDREQVSEYNVTVRAADGGSPALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENN 2543
Query: 64 EIGSL 68
G L
Sbjct: 2544 AAGVL 2548
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+ A + + +DR +P+ + + L ++D+NDNAP F SA + EN
Sbjct: 1297 TASALDREQAAEHRVTVVARDRGRPSLSSSTALVLEVSDVNDNAPVFEEAAYSAYVAENN 1356
Query: 64 EIGSLSTV 71
G+ + V
Sbjct: 1357 AAGAPAPV 1364
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+ A + + +DR +P+ + + L ++D+NDNAP F SA + EN
Sbjct: 2047 TASALDREQAAEHRVTVVARDRGRPSLSSSTALVLEVSDVNDNAPVFEEAAYSAYVAENN 2106
Query: 64 EIGS 67
G+
Sbjct: 2107 AAGA 2110
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+++ Y + D PA L + +TD NDN P FA AS+ E+A
Sbjct: 1838 TARELDREQVSEYNVTVRAVDGGSPALGTAQL-CINVTDANDNTPVFAQDRYRASLREDA 1896
Query: 64 EIGS----LSTVNATIGVN-RCGHTF 84
GS +S +A G N R ++F
Sbjct: 1897 PPGSTVLNVSASDADAGTNARITYSF 1922
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDREK + Y + +D P V I + ++D+NDNAP+ + +LE
Sbjct: 3463 LKTKAALDREKASEYNITITARDSGSPPLSAVKQILVQVSDVNDNAPKTSQDSYDVYVLE 3522
Query: 62 NAEIG----SLSTVNATIGVN--------RCGHTF 84
N G ++S + +G N + GH F
Sbjct: 3523 NNVPGIPILNISATDPDLGRNAHLSYSLLQAGHIF 3557
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D +PA + I + + D NDNAP F+ + +
Sbjct: 119 ELVLAKALDREEAAFHELVLRASDGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVP 178
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L TV AT
Sbjct: 179 EDVPVGSTLVTVTAT 193
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D +PA + I + + D NDNAP F+ + +
Sbjct: 2271 ELVLAKALDREEAAFHELVLRASDGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVP 2330
Query: 61 ENAEIGS----LSTVNATIGVNRC 80
E+ +GS ++ +A G+N C
Sbjct: 2331 EDVPVGSTIVIVTATDADEGLNGC 2354
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D +PA + I + + D NDNAP F+ + +
Sbjct: 766 ELVLAKALDREEAAFHELVLRASDGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVP 825
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L TV AT
Sbjct: 826 EDVPVGSTLVTVIAT 840
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D +PA + I + + D NDNAP F+ + +
Sbjct: 2703 ELVLAKALDREEAAFHELVLRASDGGEPAQTGTARIRVAVLDANDNAPVFSQAEYTVRVP 2762
Query: 61 ENAEIGS-LSTVNA 73
E+ +GS L TV A
Sbjct: 2763 EDVPVGSTLVTVTA 2776
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L + +PA + I + + D NDNAP F+ + +
Sbjct: 1625 ELVLAKALDREEAAFHELVLRARAGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVP 1684
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L TV AT
Sbjct: 1685 EDVPVGSTLVTVTAT 1699
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D +PA + I + + D NDN P F+ + +
Sbjct: 447 ELVLAKALDREEAAFHELMLRATDGGEPARTGTARIRVEVLDANDNTPVFSQAEYTVRVP 506
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L V AT
Sbjct: 507 EDVPVGSTLVIVTAT 521
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A L D P + + + +TD NDN P FA AS+
Sbjct: 3138 ELVLRRALDREREASLRLVLTALDGGDPPRSGTAQLCINVTDANDNTPVFAQDRYRASLR 3197
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTF 84
E+A GS +S +A G N R ++F
Sbjct: 3198 EDAPPGSTVLNVSASDADAGTNARITYSF 3226
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ Y ++ VQ RD + +T+T+TD+NDNAP+ + + + I E+A+
Sbjct: 2383 RSLDFEEGDTYEMD--VQARDSGGLFDTAKVTITVTDVNDNAPKISVRSSLSEISEDAQS 2440
Query: 66 GSL 68
G++
Sbjct: 2441 GTV 2443
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ Y ++ VQ RD + + +T+TDINDNAPE + I E+A
Sbjct: 559 RSLDFEEGDSYEMD--VQARDGGGLSDTARVAITVTDINDNAPEVSVRSALREISEDAPS 616
Query: 66 GSL 68
G++
Sbjct: 617 GTV 619
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E+ + +L+ VQ RD ++ +T+T++D+NDNAPE + + + I E++ G
Sbjct: 2815 LDFEEFS--SLDLEVQARDGGDLSNMAKVTITVSDVNDNAPEISVRSSLSEISEDSPAG 2871
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD EK Y + VQ D + +T+T+TD+NDN PE + I E+A
Sbjct: 231 RSLDYEKDDSYEM--EVQTHDGGGLFDKTKVTITVTDVNDNPPEITVSSAVSEISEDAPP 288
Query: 66 GSL 68
G++
Sbjct: 289 GTM 291
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
L+RE R L A D P + + + +TD NDNAP FA AS+ E+A GS
Sbjct: 1093 LEREPSLRLVLTA--LDGGDPPRSGTAQLCINVTDANDNAPVFAQDRYRASLREDAPPGS 1150
Query: 68 ----LSTVNATIGVN 78
+S +A G N
Sbjct: 1151 TVLNVSASDADSGTN 1165
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQIF-SAYVS 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGIN 2806
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y L D P + + ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P F+ + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLTGT 2171
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS ++ +I
Sbjct: 2315 ELRVIQSLDREARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P IN +L
Sbjct: 3463 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TINEGEVL 3520
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3521 ENKRPGTL 3528
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E++ +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2622 QVSISKPLDFEQVQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEKDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2682 ENLSPRKILTVSAT 2695
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LKT + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR V +T+TL D+ND P F S ++ E
Sbjct: 2211 ITVAKTLDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2885 ELTEVGSKVTQVSAT 2899
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +L+ +T+ D+NDNAP F + S + +
Sbjct: 847 QLTTASVIDREEQSFYQLRVVASGG---AVTGDTLVNITVKDLNDNAPHFLQAVESINAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS L +T D+ND P F+ + S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSVVE 594
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 595 NAPAGTELLVLGATDG 610
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3619
>gi|158429203|pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213)
Length = 213
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 60 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 120 GALPGTSVMEVTAT 133
>gi|390354059|ref|XP_001198628.2| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 1151
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE + Y + + D +P S +T+TLTD+NDNAP+F +I
Sbjct: 839 ELKVLMPLDRETQSTYDVTVKISDMGKPQHTRKSPLTITLTDVNDNAPQFDLKQYDVAIP 898
Query: 61 ENAEIG-SLSTVNAT 74
E+AE+G S V+A+
Sbjct: 899 EDAEVGLSFLAVHAS 913
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2897 EIRSIRPLDREKMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQIF-SAYVS 2955
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2956 ENSPLGYTVTRVTTSDEDIGIN 2977
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 373 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 432
Query: 62 NAEIGS 67
+A +GS
Sbjct: 433 DAVVGS 438
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y L D P + + ++L DINDN+P F V A I E
Sbjct: 812 LSTISSLDREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 871
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 872 NEPGGSYVTTVSAT 885
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P F+ + I EN G+
Sbjct: 2283 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLTGT 2342
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FAS ++ +I
Sbjct: 2486 ELRVIQSLDREARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIP 2545
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2546 EDAPTGT 2552
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P IN +L
Sbjct: 3634 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL--TINEGEVL 3691
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3692 ENKRPGTL 3699
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD E++ +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2793 QVSISKPLDFEQVQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPAFEKDPFVSEIL 2852
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2853 ENLSPRKILTVSAT 2866
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LKT + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2171 LKTLKALDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMFLS 2224
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P FA +
Sbjct: 591 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFAQQV 650
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 651 YRVNLSEEVPPGSYVSGVSATDG 673
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR V +T+TL D+ND P F S ++ E
Sbjct: 2382 ITVAKTLDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPE 2441
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2442 N--LGTL 2446
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1546 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVP 1605
Query: 65 IGS 67
+G+
Sbjct: 1606 LGT 1608
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2999 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 3055
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 3056 ELTEVGSKVTQVSAT 3070
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1966 DLIATRRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPKFSRPVYSFDIP 2022
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 2023 EDTTPGSL 2030
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +L+ +T+ D+NDNAP F + S + +
Sbjct: 1018 QLTTASVIDREEQSFYQLRVVASGG---AVTGDTLVNITVKDLNDNAPHFLQAVESINAV 1074
Query: 61 ENAEIG 66
EN + G
Sbjct: 1075 ENWQAG 1080
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 482 LDFEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPVVKFRYFPATSRYASVDEN 541
Query: 63 AEIGSL 68
A++G++
Sbjct: 542 AQVGTV 547
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS L +T D+ND P F+ + S++E
Sbjct: 708 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSVVE 765
Query: 62 NAEIGS-LSTVNATIG 76
NA G+ L + AT G
Sbjct: 766 NAPAGTELLVLGATDG 781
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 916 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 975
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 976 NVALGYHVGSVSAT 989
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3739 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3790
>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
Length = 3396
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE IA Y L A DR P + + L DIND+ P FAS + + E
Sbjct: 1038 IRTNKGLDRESIAVYHLIAIAADRGTPTLSSSVEVQIRLNDINDSPPTFASDKLTMYVPE 1097
Query: 62 NAEIGS----LSTVNATIGVNRCGH--TFRGKDLRCYNL 94
N+ +GS + + GVN H G DL ++L
Sbjct: 1098 NSPVGSAIGEIYAHDPDEGVNAIVHYSIIGGDDLNAFSL 1136
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE + + L +D P+ + + +++TDINDN+P+F + A+I E+A
Sbjct: 934 TTAALDRETTSTFLLTVTAKDSGNPSLADTTDVEISITDINDNSPQFDVPLYQATIAEDA 993
Query: 64 EIGS----LSTVNATIGVN-RCGHTFRGKDL 89
IG+ +S + +G+N R KD+
Sbjct: 994 FIGTSVLQISATDDDMGLNGRVKFMLSSKDV 1024
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ +RY D P + + +T+ DINDN P F ASI E
Sbjct: 719 IHTTSPLDREEKSRYVFQVVAIDGGIPPKSASTSVVVTIQDINDNDPIFNPKYYEASIAE 778
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 779 DQPPGTPVTTVTAT 792
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+ LD E I Y L QD P+ + + + + D NDNAP F + ++LE+
Sbjct: 617 VKPLDYESIRSYRLVIRAQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQFQEAVLESVP 676
Query: 65 IG 66
+G
Sbjct: 677 VG 678
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L D Q + + +++ + +TD N+ AP F + +AS+ E
Sbjct: 824 ITIAQSLDYKQEQRFALTVSATDSGQRSDQ--AIVNINITDANNFAPVFENAPYTASVFE 881
Query: 62 NAEIGS 67
+A +G+
Sbjct: 882 DAPVGT 887
>gi|344290725|ref|XP_003417088.1| PREDICTED: cadherin-1-like [Loxodonta africana]
Length = 884
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK R LDRE+I+ YTL +H + A E I +T+TD NDN P F + S++E
Sbjct: 215 LKVTRPLDREQISNYTLLSHAVSSNGDAVEDPMEIVITVTDQNDNKPVFTQAVFQGSVME 274
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 275 GAVPGTSVMQVTAT 288
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---NA 63
GLDRE + +YTL D + +T+ D NDN P F + ++ E NA
Sbjct: 333 GLDRESVPKYTLVVKATDLQGLGLSTSATAMITVRDNNDNPPIFNPTMYEGTVPENKANA 392
Query: 64 EIGSLSTVNATI 75
+I L +A +
Sbjct: 393 DITRLKVTDADV 404
>gi|291393041|ref|XP_002713020.1| PREDICTED: protocadherin 8 isoform 1 [Oryctolagus cuniculus]
Length = 1069
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 450 TAASLDRERIAEYNLTLVAEDRGSPPLRTVRPYTVRVGDENDNAPVFTRPVYEVSVRENN 509
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 510 PPGAYLATVAA 520
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y L QD +P + +T+ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYNLELVAQDGGRPPRSATAALTVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|157108475|ref|XP_001650242.1| protocadherin [Aedes aegypti]
gi|108884002|gb|EAT48227.1| AAEL000717-PA [Aedes aegypti]
Length = 605
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTL+ D P I LT+TDINDNAPEF I A+++E A+ G+
Sbjct: 432 LDREIKPNYTLSVVATDTGNPPLHAAKTIFLTVTDINDNAPEFEKEIYHANVMEVADPGT 491
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y+L D P + +T+ D+NDN P F A++ ENA IG+
Sbjct: 214 LDRETTPAYSLVVEALDGGNPPLRGQMTVNITIQDVNDNQPIFNQSRYFATVPENATIGT 273
>gi|355677237|gb|AER95931.1| cadherin 1, type 1, E-cadherin [Mustela putorius furo]
Length = 884
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA+Y L +H + A E I +T+TD NDN PEF + S++E
Sbjct: 216 LKVTEPLDREQIAKYILYSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFEGSVME 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 276 GALPGTSVMQVTAT 289
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 27/56 (48%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
GLDREKI YTL D + +T+TDINDNAP F + EN
Sbjct: 334 GLDREKIPTYTLVVEAADLQGEGLSTTATALITITDINDNAPVFQPTTYHGRVPEN 389
>gi|66773360|ref|NP_001019270.1| protocadherin 1 alpha 4 precursor [Danio rerio]
gi|50881589|gb|AAT85374.1| protocadherin cluster 1 alpha 4 [Danio rerio]
Length = 941
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F++ + +A + EN++ G
Sbjct: 406 LDRESVSQYNITITAADEGTPPLSSSTVITVHISDVNDNAPHFSAPVINAFLSENSQAGG 465
Query: 68 LST 70
L T
Sbjct: 466 LVT 468
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D +P I + + DINDN P F+ + +
Sbjct: 186 ELILQKALDREKQAVIHLILTAIDGGKPPKSGTLSIVVNVKDINDNKPVFSKSLYKVKVK 245
Query: 61 ENAEIGS 67
EN +G+
Sbjct: 246 ENTPVGT 252
>gi|301775673|ref|XP_002923253.1| PREDICTED: cadherin-1-like [Ailuropoda melanoleuca]
Length = 883
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA+Y L +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREQIAKYILYSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFEGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---A 63
GLDRE I +YTL D + +T+TD NDN P F + EN
Sbjct: 332 GLDRETIPKYTLVVEAADLQGEGLSTTATAVITVTDANDNPPVFKPTTYQGQVPENKADV 391
Query: 64 EIGSLSTVNATI 75
EI L +A +
Sbjct: 392 EIAVLKVTDADV 403
>gi|281349926|gb|EFB25510.1| hypothetical protein PANDA_012372 [Ailuropoda melanoleuca]
Length = 890
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA+Y L +H + A E I +T+TD NDN PEF + S++E
Sbjct: 201 LKVTEPLDREQIAKYILYSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFEGSVME 260
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 261 GALPGTSVMQVTAT 274
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---A 63
GLDRE I +YTL D + +T+TD NDN P F + EN
Sbjct: 319 GLDRETIPKYTLVVEAADLQGEGLSTTATAVITVTDANDNPPVFKPTTYQGQVPENKADV 378
Query: 64 EIGSLSTVNATI 75
EI L +A +
Sbjct: 379 EIAVLKVTDADV 390
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+ R LDRE+ ARYTL DR QP + + IT+ + D NDNAP F AS+ E+
Sbjct: 1912 SCRPLDREQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAED 1971
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ + +A +GVN
Sbjct: 1972 APLGASVVRIKATDADLGVN 1991
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 461 LDRESTSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQELYHANVMEVADPGT 520
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ AR LD E + LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 883 IRIARPLDHEAKGQVLLNIQATAGEPPVYGHTQ-VNIEVEDVNDNAPEFEASLVRISVPE 941
Query: 62 NAEIGS 67
NA++G+
Sbjct: 942 NADLGA 947
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + + +T+ D+NDN P F A++
Sbjct: 236 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 295
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 296 ENATVGT 302
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE A Y L +D+ P + + + ++D+NDNAPE A
Sbjct: 1207 EISTREPLDRELRALYDLVVEARDQGTPVRSARAPVRVHVSDVNDNAPEIA 1257
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D QP E + ++ + + D+NDN P F S + E
Sbjct: 1317 IRTRVVLDHEERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1376
Query: 62 NAEIG 66
+A +G
Sbjct: 1377 DAHVG 1381
>gi|1617084|emb|CAA84586.1| E-cadherin [Homo sapiens]
Length = 827
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 159 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 218
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 219 GALPGTSVMEVTAT 232
>gi|291393043|ref|XP_002713021.1| PREDICTED: protocadherin 8 isoform 2 [Oryctolagus cuniculus]
Length = 972
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 450 TAASLDRERIAEYNLTLVAEDRGSPPLRTVRPYTVRVGDENDNAPVFTRPVYEVSVRENN 509
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 510 PPGAYLATVAA 520
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y L QD +P + +T+ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYNLELVAQDGGRPPRSATAALTVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|341877402|gb|EGT33337.1| hypothetical protein CAEBREN_30872 [Caenorhabditis brenneri]
Length = 2606
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE ++ L+ D+ P E +L+ +T+ D+NDNAP FAS + +ILE
Sbjct: 322 IQTAAPLDRETLSLIRLDVIASDKGVPKRESSALVEITVLDVNDNAPVFASDSYNVTILE 381
Query: 62 NAEIGS-LSTVNAT 74
N + + ++TV AT
Sbjct: 382 NITLPAVIATVKAT 395
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT + LDRE +ARY+L +D P + IT+ L DINDNAP F + +I E
Sbjct: 543 IKTTKLLDRETVARYSLKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEYNVTISE 602
Query: 62 NAEIGS 67
GS
Sbjct: 603 EMPRGS 608
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 18 LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
L +DR P+ S ITLTL+D+NDNAP F + I ENA IGS
Sbjct: 882 LPIFARDRGNPSLSAASEITLTLSDVNDNAPAFEQLSYDLYIAENAPIGS 931
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTD----INDNAPEFASVINS 56
++ A LDRE A +++ D P + I + L D NDNAP+F S +
Sbjct: 745 DISVAADLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDNTDLFNDNAPQFTSSSYA 804
Query: 57 ASILENAEIGSLSTVNATIGVNRCGH----TFRGKDLRC 91
A+I E+ +G+ S + IG + H FR L+C
Sbjct: 805 ATISEDIPVGT-SFLQVFIGFLKVLHLTSIPFRYHSLQC 842
>gi|297694150|ref|XP_002824355.1| PREDICTED: protocadherin-8 isoform 1 [Pongo abelii]
Length = 1070
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTQPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|332634638|ref|NP_001193811.1| protocadherin Fat 3 precursor [Bos taurus]
gi|296471991|tpg|DAA14106.1| TPA: protocadherin Fat 3-like [Bos taurus]
Length = 4555
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S + LTL D+NDN P F+S +A +
Sbjct: 3083 ELKTLAPLDRERVPAYSLVARATDGG--GRFCQSDLRLTLEDVNDNPPVFSSDHYNACVY 3140
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +GVNR
Sbjct: 3141 ENTATKALLTRVQAVDPDVGVNR 3163
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3397 VKVKKKLDRERVSGYSLLVQAVDSGMPAMSSTATVNIDISDVNDNSPVFTPANATAVIQE 3456
Query: 62 NAEIGS 67
N +G+
Sbjct: 3457 NKPVGT 3462
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LD E ++ L +D PA V+ + + LTD+NDN PEF+ + SA I E
Sbjct: 3292 ISVSEALDYELCRKFYLVVEAKDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISE 3351
Query: 62 NAEIG 66
+A +G
Sbjct: 3352 DALVG 3356
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 781 QLQVLMPMDREHRDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPIFLQDSYSVNIL 840
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 841 ESSSIGT 847
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ L+ V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1517 LYTAERLDHEAQDKHILHIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1576
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1577 SAALGS 1582
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 888 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 947
Query: 63 AEIGSL 68
+G++
Sbjct: 948 LPVGTV 953
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 2347 TARMLDHESVQHCTLKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELA 2406
Query: 64 EIGSLST 70
G T
Sbjct: 2407 PRGHFVT 2413
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1832 IRTIASLDHEAIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETIL 1891
Query: 60 LENAEIG 66
L +G
Sbjct: 1892 LLPTYVG 1898
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 6 RGLDREKIARYTLNAHVQDRDQP---AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
R LDRE+ + YTL VQ DQ A ++ I++T+ D+NDN P F S+ E+
Sbjct: 3190 RPLDREQQSSYTL--RVQATDQSPGRALSSLATISITVLDVNDNPPVFERRDYLVSVPED 3247
Query: 63 AEIGS 67
G+
Sbjct: 3248 TSPGT 3252
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDN P FA + ++
Sbjct: 2874 ISTLKDLDHETDPMFTFSVVASDLGEAFSLSSTALVSVRVTDINDNTPVFAHKVYRGNVK 2933
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2934 ESDPPGEVVAVLST 2947
>gi|417413008|gb|JAA52855.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Desmodus rotundus]
Length = 880
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE I +YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 159 LKVTKPLDREAIPKYTLFSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQPVFEGSVME 218
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 219 GALPGTSVMQVTAT 232
>gi|397487050|ref|XP_003814626.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-1 [Pan paniscus]
Length = 840
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|395834416|ref|XP_003790200.1| PREDICTED: protocadherin-8 isoform 1 [Otolemur garnettii]
Length = 1070
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPVFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|432900850|ref|XP_004076726.1| PREDICTED: protocadherin-10-like [Oryzias latipes]
Length = 820
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE +++Y + V+DR P ITL + D+NDNAP F+ I + ++
Sbjct: 408 ELLVSKPLDREVMSKYEIVLRVRDRGFPPLSDNETITLEILDVNDNAPTFSQSIFTIHVM 467
Query: 61 ENAEIGSLST 70
EN G++ T
Sbjct: 468 ENNPPGAILT 477
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D P + I + + DINDNAP F + + ++ EN+ G+
Sbjct: 200 LDREEHAVHNLILTAVDGGVPPRSGTASIIVNVLDINDNAPLFIQPVFAVNVSENSAPGT 259
Query: 68 LSTV-NAT 74
+ + NAT
Sbjct: 260 VVMILNAT 267
>gi|327270399|ref|XP_003219977.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 812
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A Y + D+ P ITL ++DINDNAP F +S +
Sbjct: 405 KLLTDSPLDRERTAAYNITITATDKGTPPLSTYKTITLQISDINDNAPTFEKSFSSIYVP 464
Query: 61 ENAEIG-SLSTVNAT 74
EN+ G S+ T+ A+
Sbjct: 465 ENSPFGTSIFTIKAS 479
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE L D +P + I + +TD NDN P F+ I + S+
Sbjct: 195 DLVLQKSLDREIEESLQLILTAIDGGEPKKTGTAQIWINITDANDNPPVFSQEIYTVSLE 254
Query: 61 ENAEIGSL 68
EN IGSL
Sbjct: 255 ENTLIGSL 262
>gi|7533000|gb|AAF63319.1|AF231125_1 paraxial protocadherin [Mus musculus]
Length = 1071
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 452 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 511
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 512 PPGAYLATVAA 522
>gi|322967539|sp|D3ZE55.2|PCDH8_RAT RecName: Full=Protocadherin-8; AltName: Full=Activity-regulated
cadherin-like protein; Short=Arcadlin; Flags: Precursor
gi|149050049|gb|EDM02373.1| protocadherin 8, isoform CRA_a [Rattus norvegicus]
Length = 1069
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|297694152|ref|XP_002824356.1| PREDICTED: protocadherin-8 isoform 2 [Pongo abelii]
Length = 973
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTQPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y L V+ D C + I LTL D+NDNAPEF S ++
Sbjct: 3079 ELKTLMPLDREQQAVYYL--LVKATDGGGRFCQANIILTLEDVNDNAPEFTVDPYSITVF 3136
Query: 61 ENAEIGSLST----VNATIGVNRCGH 82
EN E +L T +A G+NR H
Sbjct: 3137 ENTEPKTLLTRVQATDADAGMNRKIH 3162
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDREKI+ YTL D P + + + ++D+NDN P F+ S I
Sbjct: 3392 EIKVTKLLDREKISGYTLTVQASDNGSPPRRNTTTVNIDVSDVNDNPPVFSKGNYSIIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + ++ L V+D+D P + + + ++D ND+AP F S + E
Sbjct: 1515 LYTTEKLDHETMNQHILTVMVRDQDVPVKRNYARVIINVSDTNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1575 SAAVGS 1580
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ A + L V D PA V+ + + + D NDN P+F
Sbjct: 1200 TSRKLDREQQAEHILEVTVTDNGIPAQSTVARVIVKVLDENDNKPQF 1246
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +Y LN V D P L+ + + D NDN PEF + E
Sbjct: 775 LKILSPLDREVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSYFVEVSE 834
Query: 62 NAEIGS 67
N E+ S
Sbjct: 835 NKELDS 840
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +Y + DR ++ ++++ +T+TD+NDN P F + I ++
Sbjct: 2870 ITTLKELDHEMRDKYKITVVAADRGEKIQLSSLAVVEVTVTDVNDNPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA-TIGVNR-CGHTFRGKDL 89
E+ G LST +A T VNR + G DL
Sbjct: 2930 EDDPPGGIIAILSTTDADTKEVNRQVSYYITGGDL 2964
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V + + +TDINDN P F+ +A I E+A
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDA 3349
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D P S + +++ DINDN P F SAS+
Sbjct: 3182 IRLEKPLDRELQAVYTLTLRATDEGLPRRLSSTSNLIVSVLDINDNPPVFEYREYSASVS 3241
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 3242 EDTVVGT 3248
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + D+ I + + D+NDNAP+ + ++E
Sbjct: 1092 IETADHLDRETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
>gi|50582555|ref|NP_001002763.1| cadherin-1 precursor [Bos taurus]
gi|75071639|sp|Q6R8F2.1|CADH1_BOVIN RecName: Full=Cadherin-1; AltName: Full=Epithelial cadherin;
Short=E-cadherin; AltName: CD_antigen=CD324; Contains:
RecName: Full=E-Cad/CTF1; Contains: RecName:
Full=E-Cad/CTF2; Contains: RecName: Full=E-Cad/CTF3;
Flags: Precursor
gi|40795765|gb|AAR91598.1| e-cadherin [Bos taurus]
Length = 882
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+IA+Y L +H + A E I +T+TD NDN P+F + AS LE
Sbjct: 214 LKVTQPLDREQIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKASALE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFNPTTYVGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>gi|441596380|ref|XP_004093138.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3 [Nomascus
leucogenys]
Length = 829
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL +TDINDN P F + SA I E
Sbjct: 404 LVTAASLDREQISEYNISLRASDGGSPPLSTETHITLHVTDINDNPPTFPHLSYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I T +G L Y
Sbjct: 464 NNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSY 504
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHRLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
>gi|296477899|tpg|DAA20014.1| TPA: cadherin-1 precursor [Bos taurus]
Length = 829
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+IA+Y L +H + A E I +T+TD NDN P+F + AS LE
Sbjct: 214 LKVTQPLDREQIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKASALE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFNPTTYVGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>gi|12408332|ref|NP_074059.1| protocadherin-8 precursor [Rattus norvegicus]
gi|5478349|dbj|BAA82442.1| arcadlin [Rattus norvegicus]
Length = 972
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|291230328|ref|XP_002735121.1| PREDICTED: GA26057-like [Saccoglossus kowalevskii]
Length = 3460
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y + QD P ++T+T+TDINDNAP F + AS++E A+ G+
Sbjct: 623 LDREEQSSYDIKITAQDHGLPPLRTEKIVTITITDINDNAPHFDQSVYYASVIEVADPGT 682
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE I RY L H D PA +L+ +T+TD NDN P F SA I E A +G
Sbjct: 406 LDRETIPRYELVIHAIDGGVPAKTGSTLLNVTITDANDNQPVFNQSRYSARIAETASVGR 465
Query: 67 SLSTVNAT 74
S+ V+AT
Sbjct: 466 SILQVHAT 473
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE +A YTL DR +P V+ + + + D ND+ PEF ++ E +G
Sbjct: 2648 LDRETLALYTLIVQAADRGEPQQSNVATVNIEVEDFNDHTPEFNEEEYEGTVSEGVPVGT 2707
Query: 67 SLSTVNAT---IGVN 78
++ TV+AT IG+N
Sbjct: 2708 TILTVHATDRDIGLN 2722
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE + Y + + D+ P+ +L+ + + D+ND+AP FA S S+ EN
Sbjct: 1906 TNGALDRETLGSYAVTVYANDQAFPSLFDTTLVLVNVLDMNDHAPVFAMSTYSISVPENG 1965
Query: 64 EIGSLSTVNAT 74
+ L V AT
Sbjct: 1966 QTTRLHVVVAT 1976
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L +D P E V+ + + + D NDN+P+F + + ++ E
Sbjct: 1480 IRTRAVLDRESKSSYHLTVMARDHGNPPKEAVAFVRVEVKDENDNSPKFMNSTYAFTVQE 1539
Query: 62 N 62
N
Sbjct: 1540 N 1540
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y LN D + + L D+NDNAP F S + + EN +
Sbjct: 1805 LDREQRDAYGLNISASDHGVLPRVAFQYLIIYLEDVNDNAPVFTSDMFVMDVQENQDAFI 1864
Query: 65 -IGSLSTVNATIGVN 78
+GS++ +A I VN
Sbjct: 1865 YLGSVNATDADIDVN 1879
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA +DRE L+ QD P + +T+ D+NDN P F + +AS+ E
Sbjct: 724 ISTATEIDREIKPSVMLHIMAQDGGNPPLSTNVTVIVTIRDVNDNEPSFDNSFYNASVFE 783
Query: 62 N 62
+
Sbjct: 784 D 784
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T LDRE Y L +D IT+ + D+NDNAP F ++ + SI
Sbjct: 2007 EFSTQITLDRETKHHYELEITAEDMATNPLTGTMNITVDVVDLNDNAPLFENLPYTVSIP 2066
Query: 61 ENAEI-GSLSTVNAT 74
E+ + G++ TV AT
Sbjct: 2067 EDFAVNGTVLTVVAT 2081
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL---ITLTLTDINDNAPEFASVINSA 57
++ + R DRE A Y HV D+ +S I + +TDINDNAPEF +A
Sbjct: 2111 DVTSVRRFDRESQAEYFF--HVNATDESVSNPLSSQAPIHIIITDINDNAPEFTQEPFTA 2168
Query: 58 SILENAEIGS----LSTVNATIGVN 78
+I + + S +S+ ++ GVN
Sbjct: 2169 NISNDLPVDSSVLQISSSDSDEGVN 2193
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE + Y L +D P + + + +TD+NDN P +I E
Sbjct: 1263 LYTKKMLDRELVPDYVLEVIAKDNGDPVQSATATVIIHVTDVNDNNPRLLHESYHFTINE 1322
Query: 62 N 62
N
Sbjct: 1323 N 1323
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ T LDRE YTL D PA + S++ + + D NDN PEF
Sbjct: 1365 ISTNMMLDREANFMYTLTVTATDLGTPARQDTSVVYINVLDENDNPPEF 1413
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++ R ++ +++ Y L D+ P+ V + + + D+N+N P+F +
Sbjct: 1157 QIQIHRTVEYSEMSEYELIIEAYDKGHPSLSSVMTLKVYIQDMNNNGPQFYPTSYEVDVA 1216
Query: 61 ENAEIGS-LSTVNATIG 76
E+ +G + TV+AT G
Sbjct: 1217 ESLVVGERIVTVSATDG 1233
>gi|26339466|dbj|BAC33404.1| unnamed protein product [Mus musculus]
Length = 973
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLGANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|112181162|ref|NP_067518.2| protocadherin-8 isoform 1 precursor [Mus musculus]
gi|81912655|sp|Q7TSK3.1|PCDH8_MOUSE RecName: Full=Protocadherin-8; AltName: Full=Arcadlin; AltName:
Full=Paraxial protocadherin; Flags: Precursor
gi|31544950|gb|AAH53008.1| Protocadherin 8 [Mus musculus]
gi|148703808|gb|EDL35755.1| protocadherin 8 [Mus musculus]
Length = 1070
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|262263229|tpg|DAA06606.1| TPA_inf: protocadherin gamma b4 isoform [Anolis carolinensis]
Length = 940
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ A Y + D+ P ITL ++DINDNAP F +S +
Sbjct: 405 KLLTDSPLDRERTAAYNITITATDKGTPPLSTYKTITLQISDINDNAPTFEKSFSSIYVP 464
Query: 61 ENAEIG-SLSTVNAT 74
EN+ G S+ T+ A+
Sbjct: 465 ENSPFGTSIFTIKAS 479
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE L D +P + I + +TD NDN P F+ I + S+
Sbjct: 195 DLVLQKSLDREIEESLQLILTAIDGGEPKKTGTAQIWINITDANDNPPVFSQEIYTVSLE 254
Query: 61 ENAEIGSL 68
EN IGSL
Sbjct: 255 ENTLIGSL 262
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A LDRE++ Y+L D P L+T+T+ D+NDN P F+ V +S +
Sbjct: 3327 EISVAAALDREEVPHYSLTVQAADGGDPPLSSAILVTITVADVNDNPPIFSRVNHSLLLQ 3386
Query: 61 ENAEIGS 67
E +GS
Sbjct: 3387 EGEPVGS 3393
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE+ A Y LN V D P + +T+TD+NDN PEF + +
Sbjct: 729 DLRLVCSLDRERNAFYVLNITVYDLGMPQKTAWRFVAVTVTDVNDNPPEFDQLRYVTRVP 788
Query: 61 ENAEIGSL 68
ENAE+ S+
Sbjct: 789 ENAEVDSV 796
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+A+ LDREK+ Y L+ V D + + L + D+NDNAP+ + + AS+ EN
Sbjct: 1049 SAKILDREKMPHYWLSVLVGDLGTEPLLSWTHVFLRVLDVNDNAPQLSQPVYFASVQENV 1108
Query: 64 E-IGSLSTVNAT 74
+ +GS++ V AT
Sbjct: 1109 DGVGSVAQVWAT 1120
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E RY + E + + + + D NDN+P+FAS AS+ ENA
Sbjct: 382 TTQKLDYESKRRYQFDVAAN-----GGEAEARVVIEVKDENDNSPQFASPSYEASLDENA 436
Query: 64 EIGS 67
+GS
Sbjct: 437 PVGS 440
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE Y L A D C S I L + D+NDN P F+S ++
Sbjct: 3017 ELLTLAVLDREAEPEYNLVAKATDGG--GRSCQSDILLMIQDMNDNPPRFSSSHYQLTVF 3074
Query: 61 ENAEI 65
+N +
Sbjct: 3075 DNTTV 3079
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T + LDRE A+ + V +D + + LTD NDN P+FA+ SI
Sbjct: 2480 QMVTTQPLDRENPAQRIIAVKVMAKDGGGKVAFCTVRIILTDENDNVPQFAASEYQVSIQ 2539
Query: 61 ENAEIGS 67
GS
Sbjct: 2540 STVNKGS 2546
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E ++ L D + + + +TD+NDN P+F S A++ E A
Sbjct: 2277 TKQVLDHEGTNQFHLKIRATDNGTAPLSSEASVLVNVTDVNDNPPDFVSSQYEATLDEKA 2336
Query: 64 EIGSL 68
+ G +
Sbjct: 2337 KCGHI 2341
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKVSHYMLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAHVP 2784
Query: 61 ENAEIGSL----STVNATIGVN 78
EN+ +G + +T + IG N
Sbjct: 2785 ENSPLGYIVTRVTTSDEDIGAN 2806
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P V+ I ++L D+NDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 701 NEPGGSYITTVSATDPDLGLN 721
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F S + E
Sbjct: 202 LVSKGGLDREVTPNYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQXGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
E+ G+
Sbjct: 2165 EDTLTGT 2171
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D PA E V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPAAEVRARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + D+NDN P F S + +I
Sbjct: 2315 ELRVTQSLDRETKEHFVLVITATDSGSPALTGTGTINVIVDDVNDNVPTFGSKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREKIA Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKIATYLLTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPE 2270
Query: 62 NAE 64
N E
Sbjct: 2271 NLE 2273
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R L+RE RY + D W + +T+ +TDINDNAP F+ E AE
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELAE 2888
Query: 65 IGS 67
IGS
Sbjct: 2889 IGS 2891
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDN+P F + IL
Sbjct: 2622 QVTISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPIFKEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2682 ENLSPRKILTVSA 2694
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P I+ ++EN G+
Sbjct: 3470 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--ISEGEVMENKRPGT 3527
Query: 68 L 68
L
Sbjct: 3528 L 3528
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVMKALDRESQSFYNLVVQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR PA + +T+ + D NDNAP+F S +
Sbjct: 2936 KYQNVSGFSNVNINRHSFIVTSSDRGNPALLSETTVTVNIVDSNDNAPQFLSDKYFTPVT 2995
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 2996 KNVKVGT 3002
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L V + V + +T+ D+NDN+P F + S +++
Sbjct: 847 QLTTASVIDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE RY LN D +PA L+ + + DINDN P F + A++ E
Sbjct: 1535 LAVTRPLDRESQNRYALNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLYEAAVAE 1594
Query: 62 NAEIGS----LSTVNATIGVN 78
N+ G+ +S + +G N
Sbjct: 1595 NSPAGTFVVKVSATDKDVGTN 1615
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E LN + P + S + +T+ D+NDNAPEF +V+ S+ E
Sbjct: 797 IRTNTELDHETHPFVLLNVAAMTGEPPTFGH-SQVNITIGDVNDNAPEFDTVVVKISVAE 855
Query: 62 NAEIGS 67
NAE+GS
Sbjct: 856 NAELGS 861
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A Y+L D P + +T+ D+NDN P F AS+ ENA IG+
Sbjct: 168 LDRETTAFYSLVIEALDGGNPPLRGFMTVNITIQDVNDNQPIFNQSRYFASVAENATIGT 227
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE TL D+ P L +TD NDNAP+F + A++LE A+ G+
Sbjct: 385 LDREVKPNMTLVVTATDQGSPPLHASRAFNLRVTDTNDNAPQFEQTMYYANVLEVADPGT 444
Query: 68 ----LSTVNATIGVNRC 80
LS ++ +G N
Sbjct: 445 SVFQLSALDRDLGNNSV 461
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ A Y L V+D +P E V + + + D+NDN P F++ + ++E
Sbjct: 1217 IRTKVTLDHEERAFYRLAVSVKDHGRPPKETVRQLQIEVLDLNDNRPTFSTSSFAFKVVE 1276
Query: 62 NAEIG 66
IG
Sbjct: 1277 GVPIG 1281
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + +DRE+I+ + L DR PA + + + + D+NDN P F + +
Sbjct: 2484 EILLVKTVDREEISVFNLKVLAMDRGSPARNSTADVVIHVDDVNDNPPVFNQTLYEVKVS 2543
Query: 61 ENAEIGS 67
E IG+
Sbjct: 2544 EAQAIGT 2550
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE RYTL D P + + + + D NDN P F + +I E
Sbjct: 1005 LYLKKSLDREMRDRYTLTVVATDNGLPPGSAAATVNVFVNDANDNDPVFTRDVYQFTIEE 1064
Query: 62 NAEIGSLSTV 71
N E G+L V
Sbjct: 1065 NLEKGALVGV 1074
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 10 REKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
R+ + + + A QDR +P+ V + + + D+N+NAP+F+ + +A I E+A G++
Sbjct: 2389 RQPVLQLVVKA--QDRGRPSLSSVVAVRIQIADVNNNAPKFSQDVYTAHISEDATRGTI 2445
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSASI 59
L AR +DRE +A+YTL D P ++ I + + D+ND AP F + S+
Sbjct: 1322 LFVAREIDREAVAQYTLQVKAVDSSVTHPQSNIIN-IKIDVVDVNDCAPSFNADPVVFSV 1380
Query: 60 LENAEIGS 67
ENA +G+
Sbjct: 1381 SENAAVGT 1388
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
E+ T LDRE A + L V+D+ P +++ + +TD+NDN P
Sbjct: 1107 EIFTKGPLDREAKAVHELQIEVKDQGNPPRSAKAIVRVMVTDVNDNTP 1154
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILEN 62
++R LDRE RY L QDR P+ + IT+++ D ND+ P F +A++ EN
Sbjct: 1745 SSRPLDRELKDRYYLIIAAQDRGVPSPRQGFCNITVSVDDENDSDPRFTQNRYTATLAEN 1804
Query: 63 AEIGSL-STVNAT 74
+ ++ TV AT
Sbjct: 1805 VQPDTIVMTVQAT 1817
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ A+ LD E+ +YTL D A + IT+ + D NDNAP F+ AS+
Sbjct: 2276 KITLAQPLDHERQQQYTLRVQASDM---AHITETSITVNVLDENDNAPVFSVQNYRASLP 2332
Query: 61 ENAEIG-SLSTVNAT 74
E E G ++ ++NAT
Sbjct: 2333 ELTEPGYAVLSINAT 2347
>gi|6631102|ref|NP_002581.2| protocadherin-8 isoform 1 precursor [Homo sapiens]
gi|37999485|sp|O95206.2|PCDH8_HUMAN RecName: Full=Protocadherin-8; AltName: Full=Arcadlin; Flags:
Precursor
gi|6513853|gb|AAC70009.2| protocadherin [Homo sapiens]
gi|119572434|gb|EAW52049.1| protocadherin 8, isoform CRA_a [Homo sapiens]
Length = 1070
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|395834418|ref|XP_003790201.1| PREDICTED: protocadherin-8 isoform 2 [Otolemur garnettii]
Length = 973
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPVFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|149050050|gb|EDM02374.1| protocadherin 8, isoform CRA_b [Rattus norvegicus]
Length = 972
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|332216520|ref|XP_003257399.1| PREDICTED: protocadherin-8 isoform 1 [Nomascus leucogenys]
Length = 1070
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|13876378|gb|AAK21986.1| protocadherin ARCADLIN [Homo sapiens]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|23271913|gb|AAH36025.1| Protocadherin 8 [Homo sapiens]
gi|123993327|gb|ABM84265.1| protocadherin 8 [synthetic construct]
Length = 1070
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|351707773|gb|EHB10692.1| Protocadherin-8 [Heterocephalus glaber]
Length = 889
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 385 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 444
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 445 PPGAYLATVAA 455
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + + + + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALAVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ ARYTL DR QP + I++ + D NDN P F AS+ E+
Sbjct: 1948 SARSLDREQHARYTLQLQASDRGQPITQQGHCNISVFVEDQNDNEPRFELSKYMASVPED 2007
Query: 63 AEIG----SLSTVNATIGVN 78
A IG S+ +A +GVN
Sbjct: 2008 AAIGSSVLSIKASDADLGVN 2027
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + YTL+ D+ P I L +TD+NDNAPEF + A+++E A+ G+
Sbjct: 484 LDREATSNYTLSVVATDKGTPPLHASKSIFLRVTDVNDNAPEFEQDVYHANVMEVADPGT 543
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E A+ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 906 IRIAHPLDHEAKAQVLLNIQATSGEPPVYGHTQ-VNIEVEDVNDNAPEFETSMVRISVPE 964
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 965 NAELGA 970
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + + +T+ D+NDN P F A++
Sbjct: 259 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 318
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 319 ENATVGT 325
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + + +TD+NDNAPE A
Sbjct: 1247 EISTREPLDREMRELYDLMVEARDQGTPTRSARAPVRVHVTDVNDNAPEIA 1297
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---- 62
LDRE RY L D PA + + + + D NDN P+F I EN
Sbjct: 1150 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRRG 1209
Query: 63 AEIGSLSTVNATIGVN 78
A +G +S +A +G N
Sbjct: 1210 AVVGVVSASDADLGEN 1225
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 25/96 (26%)
Query: 4 TARG-LDREKIARYTLNAHVQD------------RDQPAWEC-----------VSLITLT 39
T RG DRE ++YTL +V+D R Q + E V+ + +T
Sbjct: 1820 TTRGQFDRETHSQYTLPIYVRDANRMAATPTSAIRKQRSSESNSEPASGQHFDVATLIIT 1879
Query: 40 LTDINDNAPEF-ASVINSASILENAEIGSLSTVNAT 74
+ D+NDNAPEF S+ EN+E + TV A+
Sbjct: 1880 IGDVNDNAPEFRPGACYGLSVPENSESSVIHTVVAS 1915
>gi|426375595|ref|XP_004054615.1| PREDICTED: protocadherin-8 [Gorilla gorilla gorilla]
Length = 1037
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 418 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 477
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 478 PPGAYLATVAA 488
>gi|194208742|ref|XP_001497068.2| PREDICTED: cadherin-1-like [Equus caballus]
Length = 915
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+I++Y L +H + A E I +T+TD NDN PEF ++ S++E
Sbjct: 246 LKVTEPLDREEISKYILFSHAVSSNGNAIEDPMEIVITVTDQNDNKPEFTQLVFEGSVME 305
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 306 GALPGTSVMQVTAT 319
>gi|112181187|ref|NP_001036191.1| protocadherin-8 isoform 2 precursor [Mus musculus]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|14589937|ref|NP_116567.1| protocadherin-8 isoform 2 precursor [Homo sapiens]
gi|119572435|gb|EAW52050.1| protocadherin 8, isoform CRA_b [Homo sapiens]
gi|119572436|gb|EAW52051.1| protocadherin 8, isoform CRA_b [Homo sapiens]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|66773362|ref|NP_001019272.1| protocadherin 1 alpha 6 precursor [Danio rerio]
gi|50881594|gb|AAT85376.1| protocadherin cluster 1 alpha 6 [Danio rerio]
Length = 939
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F + + +A + EN++ G
Sbjct: 404 LDRESVSQYNITITAADEGTPPLSSSTVITVHISDVNDNAPHFPAPVINAFLSENSQAGG 463
Query: 68 LST 70
L T
Sbjct: 464 LVT 466
>gi|332216522|ref|XP_003257400.1| PREDICTED: protocadherin-8 isoform 2 [Nomascus leucogenys]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ Y L +D P+ + + +++TD+NDNAP+F + A+I E+A IG+
Sbjct: 968 LDRETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFKVPLYQATIAEDALIGT 1027
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDL 89
++ + +G+N R +T KD+
Sbjct: 1028 SVVQIAATDIDMGLNGRIKYTLSSKDI 1054
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE IA Y L A D+ P + + L D+ND+ P F S + + E
Sbjct: 1068 IRTNKGLDRESIAIYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPE 1127
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1128 NSPVGSV 1134
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY+ D P + + +T+ D+NDN P F+ A+I E
Sbjct: 749 IHTTKPLDREERSRYSFQVIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYYEATIAE 808
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 809 DQPPGTPVTTVTAT 822
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + ++L
Sbjct: 643 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVL 702
Query: 61 ENAEIG 66
E+ +G
Sbjct: 703 ESVPVG 708
>gi|440905410|gb|ELR55787.1| Cadherin-1 [Bos grunniens mutus]
Length = 883
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+IA+Y L +H + A E I +T+TD NDN P+F + S+LE
Sbjct: 214 LKVTQPLDREQIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKGSVLE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFNPTTYVGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ Y L +D P+ + + +++TD+NDNAP+F + A+I E+A IG+
Sbjct: 968 LDRETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFKVPLYQATIAEDALIGT 1027
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDL 89
++ + +G+N R +T KD+
Sbjct: 1028 SVVQIAATDIDMGLNGRIKYTLSSKDI 1054
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE IA Y L A D+ P + + L D+ND+ P F S + + E
Sbjct: 1068 IRTNKGLDRESIAIYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPE 1127
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1128 NSPVGSV 1134
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY+ D P + + +T+ D+NDN P F+ A+I E
Sbjct: 749 IHTTKPLDREERSRYSFQVIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYYEATIAE 808
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 809 DQPPGTPVTTVTAT 822
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + ++L
Sbjct: 643 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVL 702
Query: 61 ENAEIG 66
E+ +G
Sbjct: 703 ESVPVG 708
>gi|345800952|ref|XP_536807.3| PREDICTED: cadherin-1 [Canis lupus familiaris]
Length = 885
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 216 LKVTEPLDREQIAKYILYSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQAVFQGSVTE 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 276 GALPGTSVMQVTAT 289
>gi|323714621|pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant
gi|323714622|pdb|3Q2L|B Chain B, Mouse E-Cadherin Ec1-2 V81d Mutant
Length = 213
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHADSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|151554459|gb|AAI47915.1| CDH1 protein [Bos taurus]
Length = 883
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+IA+Y L +H + A E I +T+TD NDN P+F + S+LE
Sbjct: 214 LKVTQPLDREQIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKGSVLE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFNPTTYVGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>gi|397484866|ref|XP_003813587.1| PREDICTED: protocadherin-8 [Pan paniscus]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|170031841|ref|XP_001843792.1| protocadherin [Culex quinquefasciatus]
gi|167871191|gb|EDS34574.1| protocadherin [Culex quinquefasciatus]
Length = 955
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTL+ D P I LT+TDINDNAPEF I A+++E A+ G+
Sbjct: 653 LDREIKPNYTLSVVATDTGNPPLHAAKTIFLTVTDINDNAPEFEKEIYHANVMEVADPGT 712
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y+L D P + + +T+ D+NDN P F A++ ENA IG+
Sbjct: 435 LDRETTPAYSLVVEALDGGNPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATIGT 494
>gi|327270485|ref|XP_003220020.1| PREDICTED: protocadherin alpha-8-like [Anolis carolinensis]
Length = 797
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDREK+A Y L VQD+ PA S + + + D+NDNAP FA + + E
Sbjct: 407 LTLSEPLDREKVAEYRLIVTVQDQGSPALSASSNLVVPIGDVNDNAPAFAQPSYTVFVKE 466
Query: 62 NAEIGS-LSTVNAT 74
N G+ + TV+A+
Sbjct: 467 NNPPGAHIFTVSAS 480
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE ++ + L V D QP + +T+ D+NDN P F + +LENA G
Sbjct: 199 LDREALSVHHLLLTVTDSGQPVLSGTVQLLITVLDVNDNPPVFNQSVYKVQLLENASNGT 258
Query: 67 SLSTVNAT 74
S+ VNAT
Sbjct: 259 SVVKVNAT 266
>gi|354492229|ref|XP_003508252.1| PREDICTED: protocadherin gamma-A3-like [Cricetulus griseus]
Length = 802
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA+ LDRE++++Y ++ D+ P + ITL ++DINDN P F SA + E
Sbjct: 398 LVTAKSLDREQVSQYNISLKATDQGNPPLSTETHITLHVSDINDNPPTFTHTSYSAYVPE 457
Query: 62 NAEIGS 67
N G+
Sbjct: 458 NNPRGA 463
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREKIA + L+ D P I + + D NDN P F S+L
Sbjct: 187 ELVLEQALDREKIAVHQLDLIASDGGDPVHSGKLCIKVIVLDANDNPPVFTKPEYHVSVL 246
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 247 ENVPVGTRLITVNAT 261
>gi|345793781|ref|XP_849382.2| PREDICTED: protocadherin gamma-A5 [Canis lupus familiaris]
Length = 831
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+I+ Y + V D P S I+L + DINDN P F S ILE
Sbjct: 404 LLTTKALDREEISNYNITVMVIDCGNPPLSTESYISLNVADINDNPPIFPHTPYSTYILE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 464 NNPRGISVLSVTAQDPDSGNNAKVTYSLAEDTFQGIPLSSY 504
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+A + L D P I + + D NDNAP F+ S+
Sbjct: 193 ELVLEKPLDREKVAAHNLLLTALDGGDPILSSTMHIRVMVLDANDNAPLFSLPEYRVSVP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L+ + G+N ++F +D + F+
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGELTYSFHNEDDKISKTFQ 293
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE A Y LN +DR +P E + + + + D NDN+P F SAS+ E
Sbjct: 2235 LRVTDALDRELRASYLLNITARDRGEPPQEAETQLLVRILDENDNSPIFDPKQYSASVAE 2294
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2295 NASIGAM 2301
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE++ Y L D+ +P S + L L D NDN P+F + S ++
Sbjct: 2868 EIHTTMRLDREELGEYALVVEAVDQGRPQLTGTSSVLLHLLDKNDNPPKFTRLF-SLNVT 2926
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2927 ENAEIGSF 2934
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E++ Y L QD QP+ I + D+NDNAP F + S+ + ENA IG
Sbjct: 1986 LDYEEVQHYILLVQAQDNGQPSLSTTITIYCNVLDLNDNAPIFDPMSYSSEVFENAPIG 2044
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
A GLD E + Y + D D+P+ V+L+TL +TD NDNAP +I ++ +LE
Sbjct: 2768 ADGLDYELLPLYEIWVEAVDGDRPSLRSVTLLTLNVTDTNDNAPVMERLIYNSEVLE 2824
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L V D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2972 ITVAGHLDREQQEEYILKVEVSDG---AWRAATPITITIQDQNDNAPEFEHSFYSFSFPE 3028
Query: 62 NAEIGSLSTVNATIGVNR 79
G+L V I +R
Sbjct: 3029 LQHSGAL--VGQIIATDR 3044
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + Y LN VQD V+++T+ LTD+NDN P FA + EN IG+
Sbjct: 3296 LDFDTTQEYHLNITVQDLGFQPLSAVAMLTIILTDVNDNPPVFAQKEYHGYLAENKPIGT 3355
Query: 68 L 68
Sbjct: 3356 F 3356
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 460 LDREEIGKYNLTVVAMDKGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELASKGS 519
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 520 YVTSITATDGDTGVNAEVHYEILSGNELKWFSM 552
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFASV 53
+ T R +DRE I + L DR QP+ L+T+ + DINDNAP F S+
Sbjct: 1555 IYTLRDIDREAIDTFRLTVVATDRAQPSDLQLHAEKLVTVIVEDINDNAPVFVSM 1609
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE Y L +D +P+ + + + D NDNAP+F + + SI ENA
Sbjct: 1112 LDREVRDYYALTVSCRDAGEPSRSSEVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1171
Query: 65 -IGSLSTVNATIGVN 78
+G L+ ++ IG N
Sbjct: 1172 FVGKLTALDRDIGRN 1186
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RYTL +D D PA + L T+ + DINDN P F A +
Sbjct: 2340 VRVAKNLNFERLSRYTLTVKAEDCDLENPASDTAEL-TIIILDINDNRPTFLDSPYLARV 2398
Query: 60 LEN 62
+EN
Sbjct: 2399 MEN 2401
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDRE ARY + +D+ P + + + L + D+NDN PEF
Sbjct: 666 QLTTRRFLDRESTARYEIPVIARDQGAPTPQSSTATVWLNVADVNDNDPEF 716
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+ A + L D P + + + L D+NDNAP F I
Sbjct: 3606 EITTAAHLDREETAHFNLVIGAIDMGLPPQTGSATVRIDLEDVNDNAPTFTREGLMGYIS 3665
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3666 ENEPSGT 3672
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1884 LDRETKSKYELRIRVSDGIQ---YTETYATIEVSDTNDNPPVFEETVYSFDIPENAPRGY 1940
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1941 QVGQILAKDADLGQN 1955
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + Y L D P ++ + + D+NDN P F A + EN
Sbjct: 2452 KPLDRERQSEYILTLVAMDTGSPPLTGTGVVRVEVQDMNDNGPVFELQSYHAVVEENLPA 2511
Query: 66 GSL 68
G+L
Sbjct: 2512 GTL 2514
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 231 LETKGNLDRESRGSYQLNISARDGGSPPRFGFLQVNVTILDVNDNPPIFDHSDYNVSLNE 290
Query: 62 NAEIGS 67
A G+
Sbjct: 291 TALPGT 296
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEF 50
+ T+ LDRE+ A Y L QD +P V+L T+ + D+NDNAP F
Sbjct: 2552 ITTSMPLDREETAVYHLTLMAQDSSVTEPRASSVNL-TIQVGDVNDNAPSF 2601
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSA 57
+L AR LDRE + L V RD + +S IT+ + D NDNAPEF +
Sbjct: 1339 QLTLARRLDRESQEAHHLV--VVARDAALKDSLSANTTITIVVLDENDNAPEFTQSSSEV 1396
Query: 58 SILENAEIGS 67
S+LE + G+
Sbjct: 1397 SVLETSPTGT 1406
>gi|426231069|ref|XP_004009566.1| PREDICTED: protocadherin gamma-A12 [Ovis aries]
Length = 816
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y + DR P + ITL + DINDNAP F+ SA ILE
Sbjct: 404 LMTDTLLDRELVPSYNITVMATDRGSPPLSTETHITLNVADINDNAPAFSQASYSAYILE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N A I S++ + G N
Sbjct: 464 NNPRGASIISVTAYDPDYGEN 484
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA S+
Sbjct: 193 ELVLERALDREEKAIHHLVLTASDGGDPVRTSTARIRVMVLDANDNAPAFAQSEYCVSVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT G N ++FR D + LF+
Sbjct: 253 ENVAVGTKLLLVNATDPDEGSNAEVMYSFRYVDNKAAQLFE 293
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 22 VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
VQ D + + + +T+ D+NDNAPE S+SI EN+ G+L
Sbjct: 319 VQATDNAGYSARAKVLITVLDVNDNAPEVVVTSLSSSIPENSPRGTL 365
>gi|354484351|ref|XP_003504352.1| PREDICTED: cadherin-1-like [Cricetulus griseus]
Length = 884
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA+Y L +H + A E I +T+TD NDN PEF + ++LE
Sbjct: 216 LKVTEPLDRENIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFIKQVFHGNVLE 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 276 GARPGTSVMQVSAT 289
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 334 GLDRESYPTYTLVVQAADLQGEGLSTTATAVITVDDINDNAPVFNPTTYLGQVSENEANA 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 YITTLKVT 401
>gi|114649886|ref|XP_001136934.1| PREDICTED: protocadherin-8 [Pan troglodytes]
Length = 973
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + ++E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELVEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|332227595|ref|XP_003262977.1| PREDICTED: cadherin-1 isoform 3 [Nomascus leucogenys]
Length = 821
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREHIATYTLFSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ + YTL +DR P +T+T+ D NDN+P F SA++ E
Sbjct: 363 LRVSGPLDREQTSNYTLQVIAKDRGDPPRSSSIPVTVTVLDENDNSPVFDPKQYSATVAE 422
Query: 62 NAEIGS 67
NA IG+
Sbjct: 423 NASIGA 428
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE ++ YTL D P ++ + + D+ND++PEFA A++LEN
Sbjct: 582 RPLDREVMSEYTLTLVAMDTGSPPLTGSGIVKIIVLDVNDHSPEFARQNYKATMLENMPA 641
Query: 66 GSLST 70
G+ T
Sbjct: 642 GTWVT 646
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E + Y + V+D D PA V + + +TD NDNAP + I +A++L
Sbjct: 889 EVVVASGFDYEIASFYEIWIEVRDSDLPALRSVLELQVNVTDANDNAPVMEAAIYNATVL 948
Query: 61 EN 62
EN
Sbjct: 949 EN 950
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D P + + D+NDNAP F + +A I+ENA IG+
Sbjct: 160 LDYEQMQHYILVVQATDGGMPPLSSTVTVYCNVVDLNDNAPIFEAGPLAAEIMENATIGT 219
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+IA Y L +D P + + +T+ D NDN P F + S ++
Sbjct: 993 QIDTNARLDREEIASYELIVEARDHGHPHLTGTTTVLVTVLDKNDNPPHFTRLF-SVNVT 1051
Query: 61 ENAEIGSL 68
EN+EIG+
Sbjct: 1052 ENSEIGTF 1059
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ A Y L QD +T+ + D+NDNAP F+S +A +
Sbjct: 681 DVSTMMPLDREQTAVYHLTLLAQDSSPTERATAVKLTIYVQDVNDNAPHFSSPRYTAYLP 740
Query: 61 ENAEIGSL 68
+GS
Sbjct: 741 TGTHLGSF 748
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE ++ Y L D P + + + LTD+NDN P F +
Sbjct: 1734 DIETAKQLDRESMSMYDLIIGAIDIGLPPETGTATVHIELTDVNDNGPVFDPPEVIGYVS 1793
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T++AT
Sbjct: 1794 ENEPPGTSIMTLSAT 1808
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN D + V+ +T+ ++DINDN P F + A + EN+ + S
Sbjct: 1423 LDYDMVQEYRLNITATDLGFEPRQAVATLTVNVSDINDNPPTFNQSVYHAYLPENSPLDS 1482
Query: 68 L 68
Sbjct: 1483 F 1483
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQD----RDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
++ A+ L+ E+ RY L H D + + + +T+T+ DINDNAP F A
Sbjct: 468 IRVAKNLNFERKPRYYLTIHGDDCAAEVGEKSRSDTAQVTITVLDINDNAPVFLDSPYIA 527
Query: 58 SILEN 62
++EN
Sbjct: 528 HVMEN 532
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LDRE +Y L D Q ++T+ +TD NDNAP F S S + E
Sbjct: 51 LSLAEALDRETKEKYLLRVRADDGLQ---HRDIVLTIQVTDTNDNAPTFQSTAYSFDVPE 107
Query: 62 NAEIGS 67
+ GS
Sbjct: 108 DVLRGS 113
>gi|262263258|tpg|DAA06561.1| TPA_inf: protocadherin alpha 2 unspliced isoform [Anolis
carolinensis]
Length = 882
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDREK+A Y L VQD+ PA S + + + D+NDNAP FA + + E
Sbjct: 492 LTLSEPLDREKVAEYRLIVTVQDQGSPALSASSNLVVPIGDVNDNAPAFAQPSYTVFVKE 551
Query: 62 NAEIGS-LSTVNAT 74
N G+ + TV+A+
Sbjct: 552 NNPPGAHIFTVSAS 565
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE ++ + L V D QP + +T+ D+NDN P F + +LENA G
Sbjct: 284 LDREALSVHHLLLTVTDSGQPVLSGTVQLLITVLDVNDNPPVFNQSVYKVQLLENASNGT 343
Query: 67 SLSTVNAT 74
S+ VNAT
Sbjct: 344 SVVKVNAT 351
>gi|116283974|gb|AAH52388.1| Pcdh8 protein [Mus musculus]
Length = 966
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|332234769|ref|XP_003266576.1| PREDICTED: protocadherin gamma-A4 [Nomascus leucogenys]
Length = 820
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA I E
Sbjct: 404 LLTHRTLDREEVSEYNITVTAADQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPMFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
>gi|119514243|gb|ABL75906.1| protocadherin 2G31 [Takifugu rubripes]
Length = 947
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDREK +L D +P LI +T+ D NDNAP F I ASI
Sbjct: 190 EMVLKKPLDREKNEHISLVLTALDGGEPQMSGTMLILITVLDANDNAPIFTQPIYKASIK 249
Query: 61 ENAEIGSL-STVNAT 74
ENA +G+L STV A+
Sbjct: 250 ENAPVGTLVSTVTAS 264
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ + Y + D P+ +TL ++D+NDN P F A I+E
Sbjct: 401 LMTDSELDRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSYEAYIVE 460
Query: 62 NAEIG-SLSTVNA 73
N G S+ TV A
Sbjct: 461 NNTPGLSIFTVKA 473
>gi|332227593|ref|XP_003262976.1| PREDICTED: cadherin-1 isoform 2 [Nomascus leucogenys]
Length = 904
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREHIATYTLFSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+ LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A
Sbjct: 963 TSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSILEDA 1022
Query: 64 EIGS----LSTVNATIGVN 78
+G+ +S + IG+N
Sbjct: 1023 LVGTSVIQVSATDPDIGLN 1041
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1067 IRTNKGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1126
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1127 NSPVGSV 1133
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 748 VQTIKPLDREEQNRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGE 807
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 808 DQPPGTPVTTVTAT 821
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 642 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 701
Query: 61 ENAEIG 66
EN +G
Sbjct: 702 ENVPVG 707
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D S + + +TD N+ AP F + SAS+ E
Sbjct: 853 ITIAQPLDYKQEKRFLLT--VTATDSGGRSDTSTVHINITDANNYAPIFENAPYSASVFE 910
Query: 62 NAEIGS----LSTVNATIGVN 78
+A IG+ +S ++ +G+N
Sbjct: 911 DAPIGTTVLVVSATDSDVGIN 931
>gi|14196468|ref|NP_114442.1| protocadherin gamma-A4 isoform 2 precursor [Homo sapiens]
gi|5457070|gb|AAD43771.1|AF152511_1 protocadherin gamma A4 short form protein [Homo sapiens]
gi|119582361|gb|EAW61957.1| hCG1982215, isoform CRA_aj [Homo sapiens]
Length = 820
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA I E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
>gi|402902116|ref|XP_003913968.1| PREDICTED: protocadherin-8 [Papio anubis]
Length = 1014
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|387542890|gb|AFJ72072.1| protocadherin-8 isoform 1 precursor [Macaca mulatta]
Length = 1070
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|348583479|ref|XP_003477500.1| PREDICTED: protocadherin-8-like isoform 1 [Cavia porcellus]
Length = 1070
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASI 59
+L + LDRE A Y+L QD +P + +++ + D ND++P F + +
Sbjct: 196 DLVLVQELDRESQATYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVEL 255
Query: 60 LENAEIGSL 68
E+A +GSL
Sbjct: 256 AEDAPVGSL 264
>gi|190336730|gb|AAI62531.1| Pcdh1a3 protein [Danio rerio]
gi|190338818|gb|AAI62534.1| Pcdh1a3 protein [Danio rerio]
Length = 939
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F + + +A + EN++ G
Sbjct: 404 LDRESVSQYNITITAADEGTPPLSSSTVITVHISDVNDNAPHFPAPVINAFLSENSQAGG 463
Query: 68 LST 70
L T
Sbjct: 464 LVT 466
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D +P I + + D+NDN P F+ + +
Sbjct: 186 ELVLQKTLDREKQAVIHLILTAVDGGKPPKSGTLSIIVEVMDVNDNKPIFSKSLYKVKVK 245
Query: 61 ENAEIGS-LSTVNAT 74
EN++ G+ + T++A+
Sbjct: 246 ENSQFGAKIITISAS 260
>gi|109120871|ref|XP_001085113.1| PREDICTED: protocadherin-8 isoform 2 [Macaca mulatta]
Length = 1070
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|73954163|ref|XP_536461.2| PREDICTED: protocadherin Fat 2 [Canis lupus familiaris]
Length = 4354
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D +P ++I + + D+NDN P F + S S+
Sbjct: 3382 ELQVAKALDWEQTSSYSLRLRATDSGRPPLHEDTVIAIQVVDVNDNPPRFFQLNYSTSVQ 3441
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3442 ENSPIGS 3448
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2333 EMSTVQELDYETQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2392
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2393 ELATCGHL 2400
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1197 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVIHIVDVNDNPPVFS 1246
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 775 LTVAAPLDYEVTSFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQITISE 834
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 835 DTEVGT 840
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK Y+L A D C + +TL + D+NDNAP F + ++
Sbjct: 3071 ELTTLTALDREKKDTYSLVAKATDGG--GQSCQADVTLHVEDVNDNAPHFFPSHCAVAVF 3128
Query: 61 ENAEI 65
+N +
Sbjct: 3129 DNTTV 3133
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 11/62 (17%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATIGVNRCGHTFRGKDLR 90
++ +++TD NDNAP+FAS S++EN+E G +L T++A I T + + +
Sbjct: 2896 MVEVSITDENDNAPQFASEDYRGSVVENSEPGEVVATLKTLDADI-------TEQNRQVT 2948
Query: 91 CY 92
CY
Sbjct: 2949 CY 2950
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE ++ Y L DR V+ + + +TD+NDN P+ + + S+ E
Sbjct: 1092 IQTLAPLDREFVSCYWLTVLAVDRGSTPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVRE 1151
Query: 62 NAEI 65
+A +
Sbjct: 1152 DAPL 1155
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E ++ L+ + + ++ I + +TDIN++ P F + S +LE
Sbjct: 3278 LYVNKSLDFETSPKFFLSIECSRKGSSSLSDMTTIVVNITDINEHRPRFPQDLYSTRVLE 3337
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT +G N+ GH
Sbjct: 3338 NAIVGDVVLTVSATDEDGPANSAITYSLVGGNQLGH 3373
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
DREK Y + ++D P +L+ +++ D+NDN P+F + I + E G
Sbjct: 2031 FDREKQDTYEVAVELRDNRTPQRVAQALVRVSVEDVNDNHPQFKHLPYYTIIQDGTEPGD 2090
Query: 67 ---SLSTVNATIGVN 78
+S + +GVN
Sbjct: 2091 VLFQVSATDQDLGVN 2105
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP V+ + +TL D NDN+P+ + ++S
Sbjct: 877 ELVVTGHLDRESEPQYILK--VEARDQPRKGHQLFSVTDLIITLEDANDNSPQCITELSS 934
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 935 LKVPEDLPPGTILT 948
>gi|348531808|ref|XP_003453400.1| PREDICTED: protocadherin-8-like [Oreochromis niloticus]
Length = 915
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREKI Y L +D P + ++ T+ LTD NDNAP F+ + S++EN G+
Sbjct: 418 LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVSVVENNAPGA 477
Query: 68 LST 70
T
Sbjct: 478 YIT 480
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A Y L D P+ + I + + D NDN+P F S +
Sbjct: 192 ELVLMKELDRETQASYALELVAMDGGNPSRSGTTRINIKVKDYNDNSPVFDRSSFSVDLP 251
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 252 EDAPVGTL 259
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL---------ITLTLTDINDNAPEFA 51
+L +DRE+I ++TL+ + A++ VS + + + DINDN+PEF
Sbjct: 80 QLTIGERIDRERICKHTLHCLI------AFDVVSFSKEQFKLIHVEVEVKDINDNSPEFP 133
Query: 52 SVINSASILENAEIGS 67
+S I EN +G+
Sbjct: 134 RKESSLEISENTAVGT 149
>gi|332227591|ref|XP_003262975.1| PREDICTED: cadherin-1 isoform 1 [Nomascus leucogenys]
Length = 882
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREHIATYTLFSHAVSSNGNAVEDPMEIVITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
>gi|11056026|ref|NP_061740.1| protocadherin gamma-A4 isoform 1 precursor [Homo sapiens]
gi|37999839|sp|Q9Y5G9.1|PCDG4_HUMAN RecName: Full=Protocadherin gamma-A4; Short=PCDH-gamma-A4; Flags:
Precursor
gi|5456940|gb|AAD43718.1| protocadherin gamma A4 [Homo sapiens]
gi|119582368|gb|EAW61964.1| hCG1982215, isoform CRA_aq [Homo sapiens]
gi|157170236|gb|AAI52813.1| Protocadherin gamma subfamily A, 4 [synthetic construct]
gi|162318806|gb|AAI56731.1| Protocadherin gamma subfamily A, 4 [synthetic construct]
gi|261858056|dbj|BAI45550.1| protocadherin gamma subfamily A, 4 [synthetic construct]
Length = 931
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA I E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E Y ++ V+ D P S + +T+ D NDNAPE ++S+ E++ G
Sbjct: 306 GLDYEDSGFYDID--VEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPG 363
Query: 67 SL 68
++
Sbjct: 364 TV 365
>gi|431904877|gb|ELK10014.1| Protocadherin-8 [Pteropus alecto]
Length = 674
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 295 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 354
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 355 PPGAYLATVAA 365
>gi|387542888|gb|AFJ72071.1| protocadherin-8 isoform 2 precursor [Macaca mulatta]
Length = 973
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|326673367|ref|XP_003199860.1| PREDICTED: protocadherin gamma-A7-like [Danio rerio]
Length = 768
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + RY + +D QP V IT+ ++D+NDN+P+F+ + + E
Sbjct: 388 LVTASSLDRETVPRYDITLLAKDAGQPPLSSVKTITVQVSDVNDNSPQFSLSPYAFYVFE 447
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 448 NNIAGKSLFSVSAS 461
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE ++ L D +P I + + DINDN P F + S ++ EN IG
Sbjct: 180 LDRETSRKHKLVLTALDGGRPPKSGTMEIIVDVLDINDNMPVFTQEVYSVTLKENVPIGT 239
Query: 67 SLSTVNAT 74
++ VNAT
Sbjct: 240 TVIQVNAT 247
>gi|109120873|ref|XP_001084988.1| PREDICTED: protocadherin-8 isoform 1 [Macaca mulatta]
Length = 973
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|301753509|ref|XP_002912641.1| PREDICTED: protocadherin gamma-B2-like [Ailuropoda melanoleuca]
Length = 844
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+I Y + DR +P + ITL + D+NDNAP F +
Sbjct: 403 KLVTDGPLDREEIPEYNITVLATDRGKPPLSSSTSITLHIADVNDNAPVFGQAFYLVHVA 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLR 90
EN A I +S + +G N R ++ DL
Sbjct: 463 ENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLE 497
>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Cavia porcellus]
Length = 2925
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y+L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 876 VRTLRRLDRENVAQYSLRAYAVDKGMPPARTSMEVTVTVLDVNDNPPVFEQDEFDVFVEE 935
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 936 NSPIGLAVARVTAT 949
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 465 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 524
Query: 67 SL 68
L
Sbjct: 525 YL 526
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D P + +++T+ D+NDN P F + + E
Sbjct: 565 ISVAAELDREEVDFYSFGVEARDHGTPPLTASASVSVTILDVNDNNPTFTQPEYTVRLNE 624
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 625 DAAVGTSVVTVSA---VDRDAHS 644
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 244 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 303
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 304 NLEVGYEVLTVRATDG 319
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 770 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 829
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 830 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 858
>gi|348583481|ref|XP_003477501.1| PREDICTED: protocadherin-8-like isoform 2 [Cavia porcellus]
Length = 973
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASI 59
+L + LDRE A Y+L QD +P + +++ + D ND++P F + +
Sbjct: 196 DLVLVQELDRESQATYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVEL 255
Query: 60 LENAEIGSL 68
E+A +GSL
Sbjct: 256 AEDAPVGSL 264
>gi|363738902|ref|XP_003642091.1| PREDICTED: protocadherin gamma-A2-like [Gallus gallus]
Length = 988
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+ + Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 558 TARELDRERASEYNVTVRAADGGSPALRSGAVLALRVLDVNDNAPVFAEARYSARLPENN 617
Query: 64 EIGSL 68
G+L
Sbjct: 618 AEGAL 622
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D PA + I + + D NDNAP F+ + + +
Sbjct: 345 ELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVAVLDANDNAPAFSQAVYTVRVP 404
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L T+ AT
Sbjct: 405 EDVPVGSTLLTITAT 419
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K AR LD E+ Y VQ RD + +++++TD+NDNAPE + + I E
Sbjct: 453 IKVARNLDFEEEDSYEF--EVQARDAGELFDTAKVSISVTDVNDNAPEISVRSALSEISE 510
Query: 62 NAEIGSL 68
+A G++
Sbjct: 511 DAAPGTV 517
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE YTL+ DR P I L +TDINDNAPEF + A+++E ++ G+
Sbjct: 401 LDRELQPNYTLDVVATDRGNPPLHASRTINLMVTDINDNAPEFDQEVYQANVMEVSDPGT 460
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWEC--VSLITLTLTDINDNAPEFASVINS--- 56
+ T++ LDRE + YTL +V D P V+ IT+ +TD+NDNAPEF INS
Sbjct: 1839 ITTSKYLDRETKSTYTLPIYVIDSTTPGKTLFDVATITIEVTDVNDNAPEFK--INSCYR 1896
Query: 57 ASILENAEIGSLSTVNAT---IGVN 78
+ EN +I + TV A +G+N
Sbjct: 1897 LYVPENNDIAVIHTVVAKDLDVGLN 1921
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA+ LDRE +RY L QDR +P+ IT+ + D NDN P+F S +I E+
Sbjct: 1947 TAKPLDRESHSRYYLTITAQDRGKPSMMGSCNITVMVEDQNDNDPKFDLSKYSTTIPEDI 2006
Query: 64 EI 65
I
Sbjct: 2007 SI 2008
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LD E + LN + D P + + + + D+NDNAPEF S + S+ E
Sbjct: 874 IRTASALDHELRSSVLLNIQATNGDPPVYGHTQ-VNIEIQDVNDNAPEFESNVVRISVPE 932
Query: 62 NAEIG 66
N E G
Sbjct: 933 NVETG 937
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE RY L D P+ + + + ++D NDN P+F SI EN +
Sbjct: 1091 LDRETKDRYELTVTATDNGTPSLSATAKVLVKVSDANDNDPKFMKESYEFSIEENLRSGS 1150
Query: 64 EIGSLSTVNATIGVN 78
+G LS + IG+N
Sbjct: 1151 PVGKLSATDEDIGIN 1165
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y+L D P + +T+ D+NDN P F A++ ENA +G+
Sbjct: 183 LDRETTPAYSLVIEALDGGTPPLRGEMRVNITIQDVNDNQPIFNQSRYIATVPENATVGT 242
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT LDRE Y L D P + I + + D+NDN P F + + E
Sbjct: 2369 LKTNIVLDREIRDNYKLTVIATDEGVPQMTGTARIVINVVDVNDNQPTFPPPA-TIKVSE 2427
Query: 62 NAEIGS-LSTVNA 73
E+G+ L+TV A
Sbjct: 2428 ATEVGTVLTTVAA 2440
>gi|355691692|gb|EHH26877.1| hypothetical protein EGK_16956 [Macaca mulatta]
Length = 944
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQTRHQLVLTAVDGGTPAHSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYILE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRPPGSL 472
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|339256456|ref|XP_003370397.1| putative cadherin domain protein [Trichinella spiralis]
gi|316963128|gb|EFV48919.1| putative cadherin domain protein [Trichinella spiralis]
Length = 611
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A Y + D P ++ T+ +TD+NDNAP+F S + S I
Sbjct: 215 KLTLSAPLDREIQAVYRITLRATDHGVPPLSSIAFATIVVTDVNDNAPKFTSQLESILID 274
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGKDLRCYNL 94
E+ E+G+ C H F DL N+
Sbjct: 275 EDTELGT------------CVHHFNAFDLDVANI 296
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
LDRE Y L ++ P +T+T+ D+ND APEF S
Sbjct: 422 LDRETFDEYKLLVQAENAKHPKRSTRQTVTVTVNDVNDRAPEFYS 466
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 2 LKTARGLDREKI----ARYTLNAHVQDRDQPAWECVSL---ITLTLTDINDNAPEFASVI 54
L+T DRE+I + T+ ++ D +S + +T+ D ND+ P+F +
Sbjct: 104 LRTLVQFDREEIYKINKKSTIELQIEAYDLAEVHPLSTRCSVFITVMDENDHRPQFTLDM 163
Query: 55 NSASILENAEIGS 67
SAS+LEN +IGS
Sbjct: 164 YSASLLENKDIGS 176
>gi|395504768|ref|XP_003756719.1| PREDICTED: protocadherin gamma-A4-like [Sarcophilus harrisii]
Length = 1616
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + DR P + I+L + DINDN P F S ++E
Sbjct: 404 LVTDRALDREQVSMYNITVTATDRGSPPLSTGTHISLHIEDINDNHPVFVQTSESTYVME 463
Query: 62 N----AEIGSLSTVNATIGVNRCGH 82
N I SL+ ++ IG N GH
Sbjct: 464 NNPRGTSIYSLTAHDSDIGEN--GH 486
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL R LDRE+ I R L A D P LI +T+ D NDNAP+F S S
Sbjct: 193 ELVLERALDREEEPIHRLILTAF--DGGNPVGSATVLILVTVVDANDNAPQFIQSQYSVS 250
Query: 59 ILENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
+ EN + + L VNAT G+N + FR + LF+
Sbjct: 251 VPENVPVKTCLLRVNATDPDEGINGDVSYYFRKITEKTSQLFE 293
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D QPA + I + + D NDN P F+ + S+
Sbjct: 969 ELVLKKSLDREQQSSHQLVLMALDGGQPAQNGTAQIRINVVDANDNVPVFSQQVYRVSVR 1028
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLF 95
EN GS +S + GVN ++F+ D LF
Sbjct: 1029 ENLPPGSTILGVSATDQDEGVNAEITYSFQNVDEDVKLLF 1068
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE + Y + D+ P + L + D+NDNAP F A +
Sbjct: 1179 KLLTEGTLDREHTSEYNITVTATDKGNPPLSTSKTVLLVVGDVNDNAPVFLQKSYMAYVP 1238
Query: 61 ENAEIG-SLSTVNA 73
EN G S+S V+A
Sbjct: 1239 ENNPSGTSISCVSA 1252
>gi|345324548|ref|XP_001506551.2| PREDICTED: hypothetical protein LOC100074995 [Ornithorhynchus
anatinus]
Length = 651
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE++ARY L +DR P T+ + D NDNAP FA + + ++ E
Sbjct: 290 LVTAAPLDRERVARYHLTLVAEDRGAPPRRTRRPYTVRVADENDNAPLFARPVYAVAVRE 349
Query: 62 NAEIGS-LSTVNA 73
N G+ L+TV A
Sbjct: 350 NNAPGAHLATVAA 362
>gi|297293548|ref|XP_002804273.1| PREDICTED: protocadherin-23-like [Macaca mulatta]
Length = 3366
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P V + + + D ND+ P F ++ S+
Sbjct: 1879 ELSTTRALDREQVSNFTLAILCSDLGDPPRSSVIHLQVRVLDANDHTPSFPTLYYQFSVR 1938
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1939 EDAEVGTVVFVLSAVDKDEGLN 1960
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1775 EVVTATMLDREVQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1834
Query: 61 ENAEIGSLSTVNAT 74
EN E L TV A+
Sbjct: 1835 ENQEPEVLYTVLAS 1848
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L +D +P L+++T+ D+NDN P F + +A+I E
Sbjct: 610 ISTIRTLDREVQEAVELRVVARDLGEPPLSATCLVSITVDDVNDNEPIFWRQVYNATIAE 669
Query: 62 NAEIG 66
+A +G
Sbjct: 670 HAPVG 674
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E +GS
Sbjct: 2618 LDRETSANHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKEGTPLGS 2677
Query: 68 LSTV 71
TV
Sbjct: 2678 HITV 2681
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 2300 LDYEHTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF 2342
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1671 LTTTCPLDYEMKTQHILIVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1730
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1731 NQNPGEFVT 1739
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE + + V DR P ++ +++TDINDN P F
Sbjct: 1246 ALDREHRGHHQMTVLVTDRGSPPRNATMVVYVSVTDINDNRPFF 1289
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A Y L D P L+T+++ D+ND AP F + S + E
Sbjct: 1503 LSVVRSLDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQLEYSVLLRE 1562
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1563 NSPPGTSLLTLQAT 1576
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1708 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1767
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1768 EDAPAGTL 1775
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+++ D+NDN P F ++ E+ +G+
Sbjct: 2462 LDFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGA 2521
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1160 EVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1216
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A++
Sbjct: 204 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAAVS 263
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 264 ESLAPGS 270
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSAS 58
+L+ AR LD E AR+ L D PA +L +T+ + D+ND+ P F + S S
Sbjct: 2560 DLRLARPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTS 2616
Query: 59 ILENAEIGSLST 70
+ EN G+L T
Sbjct: 2617 LAENQPPGTLVT 2628
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 425 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 470
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +D P + + + D ND+AP F S S + E
Sbjct: 1605 LTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPE 1664
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1665 GQDPQTLTTLRASDPDVGAN 1684
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F I E
Sbjct: 99 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAVLQIPE 152
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 153 HTALGTRYPLEPARDADAGHLGTQGYALSGDGAGETFR 190
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1812 ELRTATTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPT 1864
>gi|340375455|ref|XP_003386250.1| PREDICTED: hypothetical protein LOC100634395 [Amphimedon
queenslandica]
Length = 9758
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE I+ YTL + D D + I +T+TD NDN+P F S + SI E
Sbjct: 4470 LSLNRSLDRELISNYTLTVTISDSDSNPLYNYTYIDITVTDANDNSPVFTSP-DEYSISE 4528
Query: 62 NAEIG-SLSTVNAT---IGVN 78
N IG S+ TV AT IG N
Sbjct: 4529 NNNIGASIITVTATDADIGTN 4549
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE + L D P+ + +T+TDI+D+ PEF S + + ++ E A IG
Sbjct: 1567 IDRETTPTFNLTITASDYGSPSLNSSVPLIITVTDISDHPPEFTSQVFNGTVTETAAIGD 1626
Query: 68 L 68
L
Sbjct: 1627 L 1627
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ YTL D P+ E + + + + DI+D+ P F V + EN E+
Sbjct: 4809 KSLDRERQQSYTLTITAYDLGSPSLEDNTTLFIAVLDIDDSPPIFVGVSSMYYQTENTEV 4868
Query: 66 GS 67
GS
Sbjct: 4869 GS 4870
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+I +T+ +D P+ + + + + D+NDNAP F + S SI+EN+ G+
Sbjct: 4705 IDYEEIKNFTVEFFAEDLGVPSLNGTTSVFIQVLDVNDNAPMFEKLNYSDSIVENSTSGT 4764
>gi|301753535|ref|XP_002912597.1| PREDICTED: protocadherin beta-8-like [Ailuropoda melanoleuca]
Length = 799
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L QD P ++ I + + DINDNAPEF + +
Sbjct: 193 ELVLDKALDREQESELRLTLTAQDGGSPPRSGIAQIYIEVVDINDNAPEFQQPLYRVQVP 252
Query: 61 ENAEIGSL-STVNAT---IGVN 78
E++ IG L TV+AT IGVN
Sbjct: 253 EDSPIGFLIVTVSATDVDIGVN 274
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + +++T++D+NDNAP F+ + + E
Sbjct: 403 LFTERPLDRETQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDAGAN 483
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y +N +D + +C L + D+NDNAPE + I
Sbjct: 300 EIRLKKQLDFERIPFYEINIEARDAGSLSGKCTVLTQVM--DVNDNAPEVTVSAFTRQIP 357
Query: 61 ENA 63
EN+
Sbjct: 358 ENS 360
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK AR LDRE+ + YTL D P ++I + ++D+NDN P F+ S I
Sbjct: 3365 ELKVARQLDRERTSGYTLTVVASDSGTPPLSSSAMINIDISDVNDNPPLFSQANYSLIIQ 3424
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3425 ENRPKGT 3431
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E + R+ L V+D+D P + + + + D NDNAP F S + E
Sbjct: 1487 LYTAEKLDHETMHRHILTVMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFVGTPYSGRVFE 1546
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1547 SAAVGS 1552
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE A Y L A D+ P + V L+ +++ DINDN P F +A++ E+
Sbjct: 3160 RPLDRELQATYELRALASDQGSPRFSSVCLVVISVLDINDNPPVFEHREYTATVSEDVTA 3219
Query: 66 GS 67
G+
Sbjct: 3220 GT 3221
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
ELKT++ LDRE+ R+T+ A D C + + +++ D+NDN P+F+S + +
Sbjct: 3053 ELKTSQPLDREEQEEHRFTMRA----VDGGGRYCEADVHVSVEDVNDNPPQFSSDPYTFT 3108
Query: 59 ILENAEIGS 67
+ EN EIG+
Sbjct: 3109 VFENTEIGT 3117
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LD E+ ++ L D PA L+T+ +TD+NDNAPEF +++I E
Sbjct: 2315 ISTAQVLDYEETQQHKLRVRXVDGGVPALTSEVLVTVDVTDLNDNAPEFTQNTYNSTISE 2374
Query: 62 NAEIGSLST 70
A G T
Sbjct: 2375 LAPRGHFIT 2383
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE + YTLN V D P L+ + + D NDN+P+F S I E
Sbjct: 745 LQVYSPLDREAVDSYTLNITVYDLGIPQKSSSRLLGVKILDANDNSPQFLQDSYSVQISE 804
Query: 62 NAEIGS 67
+G+
Sbjct: 805 GTPVGT 810
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LD E Y + D P ++ + + LTD+NDN P F+ + +A + E+ E+G
Sbjct: 3267 LDYEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSEDTELGR 3326
Query: 67 SLSTVNA 73
+++TVNA
Sbjct: 3327 TVATVNA 3333
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LDREK+ +YT+ D+ D+ + + +T+ D+NDN P F + + ++
Sbjct: 2843 VTTLKELDREKMEKYTIGVLATDQGDRVQHVTGTRVEVTVADVNDNPPRFTAEVYKGTVS 2902
Query: 61 EN 62
E+
Sbjct: 2903 ED 2904
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E Y L + DR + + + D+NDNAP+ + + S++E
Sbjct: 1062 IRTQELLDHETTPHYWLTVYAMDRGVVPLSTFVEVYVEVQDVNDNAPQTSEPVYYPSVME 1121
Query: 62 NA 63
N+
Sbjct: 1122 NS 1123
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE + + RD ++++ LTD+NDNAP+F + ++I
Sbjct: 2520 EIFTLESLDRENNIEKVVPISLIARDGGGKVGFCVVSVILTDVNDNAPQFRAADYKSTIA 2579
Query: 61 ENAEIGS 67
+A G+
Sbjct: 2580 SDAPRGT 2586
>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Takifugu rubripes]
Length = 2908
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 735 LRTVRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVFPADDFEVLVKE 794
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 795 NSAVGSV 801
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E YTL QD +P ++++ +TD+NDN P F S AS+
Sbjct: 317 EIQVVAPLDYEAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASV 376
Query: 60 LENAEIGS 67
LE++ +GS
Sbjct: 377 LESSPVGS 384
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE + Y +D P + +T+T+ D+NDN PEF + + E+A +G
Sbjct: 430 LDRESVEHYFFGVEARDYGTPPLSATASVTITVMDVNDNRPEFLQKEYYSRLNEDAAVGT 489
Query: 67 SLSTVNA 73
S++TV A
Sbjct: 490 SVATVTA 496
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F S S+ E+A
Sbjct: 635 LDYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRYQGSVSEDA 690
>gi|118763759|gb|AAI28738.1| Pcdh8 protein [Rattus norvegicus]
Length = 694
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
Length = 3819
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+I Y + DR +P + ITL + D+NDNAP F +
Sbjct: 403 KLVTDGPLDREEIPEYNITVLATDRGKPPLSSSTSITLHIADVNDNAPVFGQAFYLVHVA 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + +G N R ++ DL
Sbjct: 463 ENNPPGASIAQVSASDPDLGPNGRVSYSIVASDL 496
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+I+ Y + V D P S I+L + DINDN P F S +LE
Sbjct: 1190 LLTTKALDREEISDYNITVTVIDCGNPPLSTESHISLNVADINDNPPIFPHTSYSTYVLE 1249
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 1250 NNPRGLSILSVTAHDPDSGNNAKVTYSLAEDTFQGMPLSSY 1290
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE+I Y + V DR +P + L + D+NDNAP F + EN A
Sbjct: 1865 LDREQIPEYNITITVTDRGKPPLSSNRSVLLNIIDVNDNAPVFGQAFYLVHVAENNPPGA 1924
Query: 64 EIGSLSTVNATIGVN-RCGHTFRGKDL 89
I +S + +G N R ++ DL
Sbjct: 1925 SIAQVSASDPDLGPNGRVSYSIVASDL 1951
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK+A + L D P I + + D NDNAP F S+
Sbjct: 979 ELVLERPLDREKVAVHDLLLTALDGGDPILSSTMHIRVMVLDANDNAPLFTRSEYRVSVP 1038
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G +L+ + G+N ++FR ++ + FK
Sbjct: 1039 ENIPVGTRLLTLTATDPDEGINGELTYSFRNEEDKISETFK 1079
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE A + L D P + I + + D NDNAP F + SI
Sbjct: 2462 ELVLERPLDREGEAVHHLVLTAVDGGDPIRSSTARILVIVLDANDNAPVFTQPVYRVSIP 2521
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TVNAT
Sbjct: 2522 ENLPVGTPVLTVNAT 2536
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T GLD E+ + Y + VQ +D + + +T+ D+NDNAPE S SI
Sbjct: 3294 ELSTLEGLDYEEFSYYEM--QVQAQDGAGSMTRAKVMITILDVNDNAPEVTVTSVSNSIP 3351
Query: 61 ENAEIGSL 68
E+ G++
Sbjct: 3352 EDTPPGAI 3359
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+++ Y + D+ P +LI L + D NDN P F S I
Sbjct: 2672 QLVTNTVLDREQVSLYNITITATDKGIPPLSTETLIYLNVADTNDNPPAFPQSSYSVYIP 2731
Query: 61 EN----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
EN A I S+ S NA I + + +G L Y
Sbjct: 2732 ENNPRGASIFSVTAHDPDSYENARITYSLSEDSLQGASLSSY 2773
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA+ LDREK + Y + D P + I++ + D NDN P F S I E
Sbjct: 3398 LMTAKNLDREKCSVYNITLKATDGGTPPLYSETHISVNVADTNDNPPAFPQSSYSVYIPE 3457
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + + +G L Y
Sbjct: 3458 NNPRGASIFSVTAHDPDSYENARITYSLSEDSLQGASLSSY 3498
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T+ LD E Y L+ ++ RD+P + + +T+ D+NDN PE S S+
Sbjct: 2569 EISTSANLDYEDSRFYELD--IEARDRPGLLDRAKVFITILDVNDNVPEVVVTSGSRSVA 2626
Query: 61 ENAEIGSL 68
E+ G++
Sbjct: 2627 ESTPPGTV 2634
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E+ YT+ +D + C I + + D NDNAPE S I E
Sbjct: 1756 LTTGGELDFEERESYTIGVEAKDGGRHTAHCK--IQIDILDENDNAPEVTLDSESKQIQE 1813
Query: 62 NAEIGSLSTVNATIGVNRCGHTFRGK 87
+AE+G TV A I + F G+
Sbjct: 1814 DAELG---TVVALIKTHDLDSGFNGE 1836
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+ + + L D P+ + I + + D NDN P F + AS+
Sbjct: 1648 ELVVKTPLDREEQSCHHLVLTAVDGGDPSRSSSTQIRVLVADANDNPPVFTQDVYKASVR 1707
Query: 61 ENAEIGS 67
EN +GS
Sbjct: 1708 ENLPMGS 1714
>gi|47228024|emb|CAF97653.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1074
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREKI Y L +D P + ++ T+ LTD NDNAP F+ + S++EN G+
Sbjct: 418 LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVSMVENNAPGA 477
Query: 68 -LSTVNA 73
++TV A
Sbjct: 478 YIATVVA 484
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A Y L D P+ + + + + D NDN+P F S +
Sbjct: 192 ELVLMKELDRETQASYALELVAVDGGSPSRTGTTRVNVRVKDYNDNSPVFDRNSFSVDLP 251
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 252 EDAPVGTL 259
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL---------ITLTLTDINDNAPEFA 51
+L +DRE+I ++T + A++ VS + + + DINDN PEF
Sbjct: 80 QLSIGERIDRERICKHTSQCLI------AFDVVSFSKEQFKLIHVEVEVKDINDNTPEFP 133
Query: 52 SVINSASILENAEIGS 67
+S I EN +G+
Sbjct: 134 RKESSLEISENTAVGT 149
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK+++Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSIRPLDREKVSQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQIF-SAYVP 2782
Query: 61 ENAEIG 66
EN+ +G
Sbjct: 2783 ENSPLG 2788
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAAVGS 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L D+NDN+P F V A I E
Sbjct: 641 LSTVASLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDVNDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N GS ++TV+AT +G+N
Sbjct: 701 NEPGGSYITTVSATDPDLGLN 721
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE A + L D PA I + + D+NDN P FAS + +I
Sbjct: 2315 ELRVIQSLDRETKAHFVLMVTATDSGSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QPA + + + + DINDN P F + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFMQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P FA +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNFGAPPGTAARARSSVASLVIFVNDINDHPPVFAQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S V+AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGVSATDG 502
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TD+NDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCP 2882
Query: 61 ENAEIGS-LSTVNAT 74
E EIGS ++ V+AT
Sbjct: 2883 ELTEIGSKVTQVSAT 2897
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + LT+ D+NDN+P F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVIWIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFREDPFVSEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSA-SILEN 62
A GLDRE ++ LN +D+ P + L+ +TL D+ND P F+ A S++EN
Sbjct: 537 AGGLDRELASQIVLNISARDQGVHPKFSYAQLV-VTLLDVNDEKPAFSQPEGYAVSVVEN 595
Query: 63 AEIGS 67
A G+
Sbjct: 596 APTGT 600
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y+L DR + + + L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYSLTVQATDRGSTPRTDTTTVNIVLLDINDFVPMFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML--TVSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATKRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKSLDRESQSFYNLVVQVHDLPQLPASRFTSTAHVSIILLDVNDNPPAFLS 2053
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA +DRE+ + Y L V + V + +T+ D+NDN+P F + S +++E
Sbjct: 848 LTTASVIDREEQSFYQLKV-VASGGTVTGDTV--VNITVKDLNDNSPHFLQAVESVNVVE 904
Query: 62 NAEIG 66
N + G
Sbjct: 905 NWQAG 909
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
>gi|355691690|gb|EHH26875.1| hypothetical protein EGK_16954 [Macaca mulatta]
Length = 810
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 NAEIG----------SLSTVNATIGVNRCGHTFRGKDLRCY 92
N G S S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDSDSNENAQIAYSLIEDTIQGAPLSAY 504
>gi|344253981|gb|EGW10085.1| Cadherin-1 [Cricetulus griseus]
Length = 744
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA+Y L +H + A E I +T+TD NDN PEF + ++LE
Sbjct: 76 LKVTEPLDRENIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFIKQVFHGNVLE 135
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 136 GARPGTSVMQVSAT 149
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 194 GLDRESYPTYTLVVQAADLQGEGLSTTATAVITVDDINDNAPVFNPTTYLGQVSENEANA 253
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 254 YITTLKVT 261
>gi|47220937|emb|CAG03470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 675
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE+ A YTLNA V DR+ A E + + + DINDNAP+F I AS+
Sbjct: 57 DIHATKRLDREEKAMYTLNAKVLDRNTNAELEPDTEFNIKIHDINDNAPKFVKEIYFASV 116
Query: 60 LENAEIG-SLSTVNAT 74
E +++G ++ T+ AT
Sbjct: 117 PEMSDVGTTVVTITAT 132
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + ++ + + P + + + D+NDNAPEFA ++ + E
Sbjct: 386 ITTLKALDREMSKWHNISVVATEINNPGQTTRVPVFIKVLDVNDNAPEFAMSYDTF-VCE 444
Query: 62 NAEIGSLSTVNATIGVNR--CGHTF 84
N + G L + + + GH F
Sbjct: 445 NVKAGQLIQTISAVDTDEPLVGHKF 469
>gi|157649930|gb|ABV59355.1| protocadherin nu8 [Callorhinchus milii]
Length = 987
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE I+++ + DR P I L ++DINDNAP F + +A ++E
Sbjct: 405 LITQQPLDRENISKFDITVVCSDRGIPPLTSSKHIRLEVSDINDNAPRFTQPVYTAQVME 464
Query: 62 NAEIGS 67
N IG+
Sbjct: 465 NNVIGA 470
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE + ++L +D P + I + + D NDNAP F + S S+ EN
Sbjct: 196 KPLDRELQSTHSLMLIAKDGGLPERSGTAEIIIIVQDANDNAPVFTQSVYSTSLSENTPK 255
Query: 66 GSL 68
G+L
Sbjct: 256 GTL 258
>gi|14039433|gb|AAK53222.1|AF326297_1 protocadherin-betaD [Mus musculus]
Length = 784
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTSYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S +++ G N
Sbjct: 462 NNSPALHIGTISAIDSDSGSN 482
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|426247588|ref|XP_004017563.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Ovis aries]
Length = 3324
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P + + + + D+ND++P F AS+
Sbjct: 1836 ELSTTRALDREEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDVNDHSPSFPRQQYEASVR 1895
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A +G+ LS+V+ G+N
Sbjct: 1896 EDAPVGTTVLVLSSVDEDEGLN 1917
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE TL V+D PA ++I T+ D ND+APE A ++ +L
Sbjct: 1732 EVVTATTLDREVQEVLTLRVLVRDGGAPALSGTTVILCTVGDENDHAPEIAVPRDNIEVL 1791
Query: 61 ENAEIGSLSTVNAT 74
EN E G + T A+
Sbjct: 1792 ENQEPGLVYTFLAS 1805
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L D +P L+++T+ D+NDN P F + +A++ E
Sbjct: 602 ISTTRSLDREAQEAVELRVVAHDLGEPPLSATCLVSITVEDVNDNEPVFLKQVYNATLPE 661
Query: 62 NAEIG 66
+A +G
Sbjct: 662 HAPVG 666
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E +++ L D P +T+T+ D+ND AP F + AS+ E
Sbjct: 1628 LTTASPLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1687
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1688 NQNPGEFVT 1696
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS---- 56
EL + LD E+ A + + V D P +L+ +++TDINDN P F +
Sbjct: 1197 ELISWVALDHEQRAHHQVAVLVSDHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELY 1256
Query: 57 ASILENAEIGSLST 70
+LE + L T
Sbjct: 1257 VKVLEGQPVNMLVT 1270
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D+ P ++I + + DINDNAP F + I EN+ G+
Sbjct: 2257 LDYEYTSAYSLIVQATDKGIPRLSDTTVIKIQVIDINDNAPTFLPS-EAVEIAENSLPGT 2315
Query: 68 LST 70
+ T
Sbjct: 2316 IVT 2318
>gi|402872830|ref|XP_003900302.1| PREDICTED: protocadherin gamma-C5 [Papio anubis]
Length = 879
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQTRHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
pisum]
Length = 5057
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE YTL D+ P ++I +T+ DINDN P F + S ++
Sbjct: 2731 EIVTNTKLDRETDDHYTLTVEAVDQGYPPLTGSAMIHITVLDINDNPPRFTRLF-SVNVT 2789
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN E+GS +++ + IGVN
Sbjct: 2790 ENTEVGSFVIGITSSDLDIGVN 2811
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE +A Y LN V+D P + +T+ D+NDN P FA SA + E
Sbjct: 187 LQTTGKLDRETVAFYQLNISVRDGGVPTRYGFQTVNVTILDVNDNPPIFAHTDYSAWLNE 246
Query: 62 NAEIGSLS 69
+A G+ +
Sbjct: 247 SAPPGTFA 254
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSL---ITLTLTDINDNAPEFASVINSASILEN 62
R LDRE +A Y L +D +PA +S +T+T+ D+ND +P + + N +++EN
Sbjct: 1998 RNLDRETVASYNLVVVAKDGGRPAASELSTTVQMTITIKDVNDCSPHWITP-NVTAVMEN 2056
Query: 63 AEIGSLSTV 71
EIG++ TV
Sbjct: 2057 VEIGTIVTV 2065
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LDRE + Y L +DR P+ + +T+ + D NDN+P F ++S+ E
Sbjct: 2100 LRVASSLDRETKSSYKLEIGAKDRGDPSLNSIMKLTVNILDENDNSPIFDPRQYTSSVPE 2159
Query: 62 NAEIG 66
N IG
Sbjct: 2160 NVTIG 2164
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD E+I Y LN D + + +++ LTDINDN P F + + ILE
Sbjct: 3152 ITIAQILDFERIREYKLNVIAMDTGFEPKKSKATLSIMLTDINDNPPTFNQTLFNVFILE 3211
Query: 62 NAEIGSLST 70
N+ +G+ T
Sbjct: 3212 NSPVGTFVT 3220
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
G+D EK ++Y + D D+P L+T+ +TD+NDN P F + S+ E
Sbjct: 2633 GIDHEKSSQYKIWIEASDSDEPKLRSAVLLTVNVTDVNDNPPVFEYPFYTVSVQE 2687
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A +DRE Y LN D +W+ + +T+T+ D+NDNAPEF + E +
Sbjct: 2838 ASAIDREVQDEYLLNVVAADG---SWQAETPLTITIQDVNDNAPEFEKSNYKFNFPETQK 2894
Query: 65 IGSLSTVNATIGVNR 79
IG +TV I +R
Sbjct: 2895 IG--ATVGRVIATDR 2907
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L D+ PA ++ + + + DIND+ P F S+++ E + +G
Sbjct: 422 LDREQINKYNLTVLASDKGTPARTTMAYLLIYVNDINDHEPVFEKSEYSSTLSELSPVGT 481
Query: 67 ---SLSTVNATIGVN 78
S++ + G+N
Sbjct: 482 YVASITATDEDTGIN 496
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E I+ Y LN D P +T+ D NDN P+F S I+EN E G+
Sbjct: 1367 LDYEDISAYVLNISAYDNGNPRLSSALAFHVTVLDCNDNPPQFPSTAIVRQIIENLEPGT 1426
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ R LDRE + + + A D P+ I + + D+ND++P+F I
Sbjct: 2313 KIHLVRSLDREVQSEHLITAVAMDSGMPSLSGTGFIRVIVQDVNDHSPQFQQQNYVVYID 2372
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ IG L+ ++ IG+N
Sbjct: 2373 ENSPIGYSVTQLTATDSDIGLN 2394
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y L+ V+D PA + + +TD NDN PEFA+V I EN G+
Sbjct: 1048 LDRESRDYYALSVVVRDAGTPARSSSVVAIVHVTDENDNKPEFANVTFDFHINENEPAGT 1107
Query: 68 L 68
Sbjct: 1108 F 1108
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y + QD +P + + + D NDNAP F + + + ENA + +
Sbjct: 1894 LDHEEVQHYIMTVQAQDAGKPMLSSTVTVYINVIDENDNAPVFETNSYNVDVYENATVNT 1953
Query: 68 L-STVNAT 74
+ +TV AT
Sbjct: 1954 IVATVMAT 1961
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDREK+ Y + +D+ P + + L + D+NDN P F A +
Sbjct: 628 QLTAKTQLDREKVLEYKIKVLAKDQGSPPKSSTATVILDVLDVNDNDPVFYPQQYVAFVG 687
Query: 61 ENAEIGS 67
+N G+
Sbjct: 688 DNHPTGT 694
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA+ LDRE ++ RY L + QP + + + + D+NDNAPEF + S S
Sbjct: 75 EITTAQILDRESLSNDRYDL---IVLSSQPTYPIE--VRILVADVNDNAPEFPEPVISVS 129
Query: 59 ILENA 63
E+A
Sbjct: 130 FPESA 134
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + +DRE R+ L V D + V + L D NDNAP FA + S + E
Sbjct: 1786 VRVRKPIDRETSPRHVLPVRVSDGVHHSDTSVVFVIL---DTNDNAPSFAKSVYSLDVSE 1842
Query: 62 N----AEIGSLSTVNATIGVN 78
+ +IG ++ V+ GVN
Sbjct: 1843 SRSRGTKIGDITAVDEDEGVN 1863
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + +DRE + Y++ + R + +L+ +T+ D+NDN P F +VI+ + E
Sbjct: 837 LTTWKKIDRENQSFYSI--RIGARAGLKF-GTTLVNVTILDVNDNEPTFVTVIDEVDLYE 893
Query: 62 NAEIG 66
N +G
Sbjct: 894 NTAVG 898
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A+ LDRE+I+ Y+L D Q + + + ++D+NDN P F + SA++
Sbjct: 1946 EIRIAKYLDREEISSYSLKVQATDNGQEPLSSDTTVLIRVSDVNDNPPRFFQLNYSAAVQ 2005
Query: 61 ENAEIGS 67
EN+ +G+
Sbjct: 2006 ENSPVGT 2012
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 34 SLITLTLTDINDNAPEFASVINSASILENAEIGSLSTVNATI 75
+L+ +T+TD NDNAP+F S I SI+ENAE G + T TI
Sbjct: 1457 TLVEVTITDENDNAPQFTSEIYKGSIVENAEPGLMITTLKTI 1498
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T GLD + ++ +TL V+D++ P + + + + D N++ P+F S+ +A +L+
Sbjct: 73 LMTVAGLDFQTMSLHTLTVMVRDQEGPIKRDFARVVIHVEDSNNHPPQFTSLHYNAEVLD 132
Query: 62 NAEIGS 67
A +G+
Sbjct: 133 AAPVGT 138
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + +D E + + D P +L+ +T+ D+NDN P+F+ A++
Sbjct: 896 EITTTQVIDYEANQEFYIKVRAMDHGVPPLSSETLVAITVLDVNDNPPKFSQPQYQANVS 955
Query: 61 ENAEIGSL 68
E G +
Sbjct: 956 EIVSCGHV 963
>gi|290560547|pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a
gi|290560548|pdb|3LNH|B Chain B, Crystal Structure Of E-Cadherin Ec12 W2a
Length = 213
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|426231043|ref|XP_004009558.1| PREDICTED: protocadherin beta-11 [Ovis aries]
Length = 777
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE+ A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LETERMLDRERQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S ++ G N
Sbjct: 463 NNSPALHIGSVSATDSDAGAN 483
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3362 EVKVTRLLDRETISGYTLTVQASDNGSPPKVNTTTVNIDVSDVNDNAPAFSRENYSVVIQ 3421
Query: 61 ENAEIG 66
EN +G
Sbjct: 3422 ENKPVG 3427
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIVVDVSDTNDHAPWFTSSSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLDVAVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ +++ +TDINDN+P F+ +A I E+A
Sbjct: 3264 LDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNSPVFSQATYTAVISEDA 3319
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ I + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQF 1245
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE A ++ + +D + + LTD NDNAP+F + SI +A
Sbjct: 2550 TLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATRYEVSIRSSA 2609
Query: 64 EIGS 67
G+
Sbjct: 2610 AKGT 2613
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLKELDHEKTDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2929 EDDPPGGVVAILST 2942
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRNNQVEYDLMVKATDKGSPPMSEMTSVHVFVTVADNASPKFTSKEYSVEMSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + ++E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYVEVEDVNDNAPQTSEPVYYPEVME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
>gi|380795977|gb|AFE69864.1| protocadherin gamma-C5 isoform 1 precursor, partial [Macaca
mulatta]
Length = 943
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 192 ELVLEQQLDREAQTRHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 251
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 252 ENAPIGTLLLRLNAT 266
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 405 LLTSQPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYILE 464
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 465 NRPPGSLLCTVAAS 478
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 307 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 364
Query: 66 GSL 68
G++
Sbjct: 365 GTV 367
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LDRE Y LN +DR P S +T+ + D NDN P F SAS+ E
Sbjct: 2079 LRVADTLDREIRVNYVLNITARDRGDPPLATQSQLTIKILDENDNIPVFDPKQYSASVAE 2138
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2139 NASIGAM 2145
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E++ Y L QD QP+ + + D+NDN P F + S+ I EN IG
Sbjct: 1830 LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNTPLFDPMSYSSEIFENVPIG 1888
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+++ Y L D+ P + + L L D NDN P+F + S ++
Sbjct: 2715 EIYTTMQLDREEMSDYALVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRLY-SLNVT 2773
Query: 61 ENAEIGSL 68
ENA+IG+
Sbjct: 2774 ENADIGTF 2781
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE IA Y L D P + + + L DINDN P F S I
Sbjct: 3454 EITTAALLDREDIAHYNLVIGAIDTGLPPQTGTATVRINLDDINDNGPTFTSEGLIGYIP 3513
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T+ AT
Sbjct: 3514 ENEPAGTSIMTLTAT 3528
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y L D P ++ + + DINDN P F A++ EN IGS
Sbjct: 2300 LDREQQSEYILTLVAMDTGSPPLSNTGIVKVEVQDINDNGPVFELQYYHATVQENLPIGS 2359
Query: 68 L 68
L
Sbjct: 2360 L 2360
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E +Y + D D+P+ V+L+ + +TD NDN P +I +A +LE
Sbjct: 2618 GLDYELTHQYEIWVAAADSDRPSLRTVTLLNINVTDANDNPPVMEKLIYNAEVLE 2672
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I++Y L D+ P + ++ + + + D+ND+ P F SA + E A G
Sbjct: 336 LDREEISKYNLTVVATDKGTPERKSIAHLIINVNDVNDHEPVFEKSEYSAVLSELAPTGT 395
Query: 67 ---SLSTVNATIGVNRCGH--TFRGKDLRCYNL 94
S++ + GVN + G +L+ +N+
Sbjct: 396 FVASIAATDEDTGVNAQVYYEILTGNELKWFNI 428
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD +++ Y LN V D V+++T+ LTD+NDN P F I EN
Sbjct: 3142 QPLDYDQMQEYHLNISVTDLGYKPLSAVAMVTIILTDVNDNPPLFNQSEYHGYIEENKPS 3201
Query: 66 GSL 68
G++
Sbjct: 3202 GTI 3204
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L D+ QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1381 IYTLREIDRESIDNFRLTVVATDQAQPSERQLSTEKLVTVIVEDINDNAPIFVSM--NAA 1438
Query: 59 IL 60
IL
Sbjct: 1439 IL 1440
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T + LDRE +A Y + +D+ PA + + + L + DINDN PEF
Sbjct: 542 QLMTRKALDRETMANYEIFVIARDQGAPAPQSATATVYLNVLDINDNNPEF 592
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L D P+ V I + + D NDN P F + + +I ENA
Sbjct: 939 LDREERDYYALTVSCSDAGVPSRSSVVPIVIHVIDENDNPPHFTNSTFTFNIPENAPPDT 998
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 999 FVGKLTAVDRDIGRN 1013
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEF 50
E+ TA LDRE I Y L QD +P V+L T+T+ D NDN P+F
Sbjct: 2397 EISTAAVLDRESIGVYQLTLMAQDSSITEPRATSVNL-TVTVGDTNDNVPKF 2447
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ A +DRE+ Y L D AW + +T+T+ D NDNAPEF
Sbjct: 2819 ITVAGEIDREQQDEYILKVIASDG---AWRAETPVTITIQDQNDNAPEF 2864
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN D P + +T+ D+NDN P F S ++ E
Sbjct: 100 LETTGNLDRESRGSYQLNISASDGGTPPRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNE 159
Query: 62 NAEIGS 67
GS
Sbjct: 160 TVLPGS 165
>gi|211418|gb|AAA82572.1| cell adhesion molecule [Gallus gallus]
Length = 887
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ LDREKI RYTL +H V QP + + +I +T+ D NDN P F + I
Sbjct: 220 LEVTEQLDREKIDRYTLLSHAVSASGQPVEDPMEII-ITVMDQNDNKPVFIKEVFVGYIE 278
Query: 61 ENAEIG-SLSTVNAT 74
ENA+ G S+ TVNAT
Sbjct: 279 ENAKPGTSVMTVNAT 293
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---A 63
GLDRE YTL D++ + + +TD NDN P F + + EN
Sbjct: 338 GLDRETTPNYTLIVQATDQEGKGLSNTATAIIEVTDANDNIPIFNPTMYEGVVEENKPGT 397
Query: 64 EIGSLSTVN 72
E+ L+ +
Sbjct: 398 EVARLTVTD 406
>gi|432107394|gb|ELK32794.1| Cadherin-1 [Myotis davidii]
Length = 746
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+YTL +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 78 LKVTQPLDREAIAKYTLLSHAVSSNGNAIEDPMEIVITVTDQNDNRPEFTQAVFEGSVKE 137
Query: 62 NAEIGS-LSTVNAT 74
A G+ + V+AT
Sbjct: 138 GALPGTPVMQVSAT 151
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDREK Y+L D + +T+ DINDNAPEF + EN
Sbjct: 196 GLDREKFPNYSLVIEAADLQGDGLSTTAKAVITVLDINDNAPEFDPTTYQGQVPENEADA 255
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 256 VIATLKVT 263
>gi|402872836|ref|XP_003900305.1| PREDICTED: protocadherin gamma-A1 [Papio anubis]
Length = 821
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 NAEIG----------SLSTVNATIGVNRCGHTFRGKDLRCY 92
N G S S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDSDSNENAQIAYSLIEDTIQGAPLSAY 504
>gi|149640336|ref|XP_001506839.1| PREDICTED: protocadherin alpha-5 [Ornithorhynchus anatinus]
Length = 837
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + + EN GS
Sbjct: 415 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPVYTVLVKENNPPGS 474
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 475 HIFTVSA 481
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D +P + +++ D NDNAP+F I + +L
Sbjct: 195 ELVLKKALDREETSEHRLLLTATDGGKPELTATVQVLVSVLDANDNAPDFVKSIYNVRLL 254
Query: 61 ENAEIGS----LSTVNATIGVNR 79
EN G+ L+ +A G+N+
Sbjct: 255 ENVANGTLVIKLNATDADEGINK 277
>gi|167736396|ref|NP_001108074.1| protocadherin beta-4 [Rattus norvegicus]
gi|149017292|gb|EDL76343.1| rCG49299 [Rattus norvegicus]
Length = 797
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D+ P IT+ ++DINDNAP F + + E
Sbjct: 402 LVTERALDRESRAEYNITISVSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
EL R LDRE+ A +L D P +L+ + + DINDNAPEF +
Sbjct: 192 ELVQDRALDREEQAELSLTLMALDGRSPPRSGTALVRILIMDINDNAPEFVN 243
>gi|66773364|ref|NP_001019268.1| protocadherin 1 alpha 3 precursor [Danio rerio]
gi|50881586|gb|AAT85373.1| protocadherin cluster 1 alpha 3 [Danio rerio]
Length = 939
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F + + +A + EN++ G
Sbjct: 404 LDRESVSQYNITITAADEGTPPLSSSTVITVHVSDVNDNAPHFPAPVINAFLSENSQAGG 463
Query: 68 LST 70
L T
Sbjct: 464 LVT 466
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D +P I + + D+NDN P F+ + +
Sbjct: 186 ELVLQKTLDREKQAVIHLILTAVDGGKPPKSGTLSIIVEVMDVNDNKPIFSKSLYKVKVK 245
Query: 61 ENAEIGS-LSTVNAT 74
EN++ G+ + T++A+
Sbjct: 246 ENSQFGAKIITISAS 260
>gi|355750267|gb|EHH54605.1| hypothetical protein EGM_15484 [Macaca fascicularis]
Length = 944
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQTRHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGSLST-VNAT 74
ENA IG+L +NAT
Sbjct: 253 ENAPIGTLLLHLNAT 267
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|290560543|pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a
gi|290560544|pdb|3LNF|B Chain B, Crystal Structure Of E-Cadherin Ec12 K14ew2a
Length = 213
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|350535419|ref|NP_001231966.1| protocadherin gamma subfamily A, 2 precursor [Gallus gallus]
gi|37222396|gb|AAQ89958.1| gammaA-like protocadherin precursor [Gallus gallus]
Length = 811
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LDRE+ + Y + D PA +++ L + D+NDNAP FA SA + EN
Sbjct: 407 TARELDRERASEYNVTVRAADGGSPALRSGAVLALRVLDVNDNAPVFAEARYSARLPENN 466
Query: 64 EIGSL 68
G+L
Sbjct: 467 AEGAL 471
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D PA + I + + D NDNAP F+ + + +
Sbjct: 194 ELVLAKALDREEAAFHELLLRASDGGDPARTGTARIRVAVLDANDNAPAFSQAVYTVRVP 253
Query: 61 ENAEIGS-LSTVNAT 74
E+ +GS L V AT
Sbjct: 254 EDVPVGSTLLRVTAT 268
>gi|410913761|ref|XP_003970357.1| PREDICTED: protocadherin gamma-A8-like [Takifugu rubripes]
Length = 800
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDREK +L D +P LI +T+ D NDNAP F I ASI
Sbjct: 183 EMVLKKPLDREKNEHISLVLTALDGGEPQMSGTMLILITVLDANDNAPIFTQPIYKASIK 242
Query: 61 ENAEIGSL-STVNAT 74
ENA +G+L STV A+
Sbjct: 243 ENAPVGTLVSTVTAS 257
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ + Y + D P+ +TL ++D+NDN P F A I+E
Sbjct: 394 LMTDSELDRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSYEAYIVE 453
Query: 62 NAEIG-SLSTVNA 73
N G S+ TV A
Sbjct: 454 NNTPGLSIFTVKA 466
>gi|345328625|ref|XP_003431286.1| PREDICTED: protocadherin alpha-13-like [Ornithorhynchus anatinus]
Length = 832
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + + EN GS
Sbjct: 416 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPVYTVLVKENNPPGS 475
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 476 HIFTVSA 482
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE ++ L D +P + +T+ D+NDNAP F I I ENA
Sbjct: 201 KSLDRETTVQHKLVLTATDGGKPELTGSVELVVTVLDVNDNAPRFDQAIYRVQIAENAPS 260
Query: 66 GSL 68
G+L
Sbjct: 261 GTL 263
>gi|11128027|ref|NP_061750.1| protocadherin gamma-B7 isoform 1 precursor [Homo sapiens]
gi|37999828|sp|Q9Y5F8.1|PCDGJ_HUMAN RecName: Full=Protocadherin gamma-B7; Short=PCDH-gamma-B7; Flags:
Precursor
gi|5456975|gb|AAD43730.1| protocadherin gamma B7 [Homo sapiens]
gi|30354254|gb|AAH51788.1| Protocadherin gamma subfamily B, 7 [Homo sapiens]
gi|119582327|gb|EAW61923.1| hCG1982215, isoform CRA_b [Homo sapiens]
Length = 929
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G+N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGLNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTINIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|14270508|ref|NP_115272.1| protocadherin gamma-B7 isoform 2 precursor [Homo sapiens]
gi|5457094|gb|AAD43783.1|AF152523_1 protocadherin gamma B7 short form protein [Homo sapiens]
gi|119582348|gb|EAW61944.1| hCG1982215, isoform CRA_w [Homo sapiens]
Length = 808
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G+N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGLNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTINIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|345328631|ref|XP_001506893.2| PREDICTED: protocadherin alpha-11-like [Ornithorhynchus anatinus]
Length = 858
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + + EN GS
Sbjct: 414 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPVYTVLVKENNPPGS 473
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 474 HIFTVSA 480
>gi|251823933|ref|NP_001156532.1| cadherin-1 precursor [Sus scrofa]
gi|209875157|gb|ACI94878.1| E-cadherin [Sus scrofa]
Length = 883
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE IA+Y L +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDREAIAKYILYSHAVSSNGQAIEEPMEIVITVTDQNDNKPEFTQEVFRGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TDINDN P F S+ EN
Sbjct: 332 GLDRESFPTYTLVIQAADLQGDGLSTTATAMITVTDINDNPPIFNPTSYQGSVPENEANV 391
Query: 67 SLSTVNATIG 76
+++T+ T G
Sbjct: 392 AITTLTVTDG 401
>gi|281427364|ref|NP_001163983.1| protocadherin gamma subfamily A, 3 precursor [Xenopus (Silurana)
tropicalis]
gi|134023863|gb|AAI35531.1| Unknown (protein for MGC:121555) [Xenopus (Silurana) tropicalis]
Length = 931
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDREK+++Y + D P I L ++D+NDN P F SA++ E
Sbjct: 406 LVTDRTLDREKVSQYIIELSASDLGDPPLHTQHKIILNISDVNDNCPTFTHATVSANVQE 465
Query: 62 NAEIGSL 68
N E G L
Sbjct: 466 NNEPGQL 472
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I + L D P S I + + D+NDNAP+F +I
Sbjct: 193 ELLLEKTLDREEIGEHHLILTAVDGGSPPRSGTSQIHVVVLDLNDNAPKFEKNSFKCTIH 252
Query: 61 ENAEIGS-LSTVNAT 74
EN + + L +NAT
Sbjct: 253 ENVPLNTILLQLNAT 267
>gi|86129428|ref|NP_001034347.1| cadherin-1 precursor [Gallus gallus]
gi|115417|sp|P08641.2|CADH1_CHICK RecName: Full=Cadherin-1; AltName: Full=Epithelial cadherin;
Short=E-cadherin; AltName: Full=Liver cell adhesion
molecule; Short=L-CAM; Flags: Precursor
gi|212245|gb|AAA82573.1| liver cell adhesion protein precursor [Gallus gallus]
Length = 887
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ LDREKI RYTL +H V QP + + +I +T+ D NDN P F + I
Sbjct: 220 LEVTEQLDREKIDRYTLLSHAVSASGQPVEDPMEII-ITVMDQNDNKPVFIKEVFVGYIE 278
Query: 61 ENAEIG-SLSTVNAT 74
ENA+ G S+ TVNAT
Sbjct: 279 ENAKPGTSVMTVNAT 293
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---A 63
GLDRE YTL D++ + + +TD NDN P F + + EN
Sbjct: 338 GLDRETTPNYTLIVQATDQEGKGLSNTATAIIEVTDANDNIPIFNPTMYEGVVEENKPGT 397
Query: 64 EIGSLSTVN 72
E+ L+ +
Sbjct: 398 EVARLTVTD 406
>gi|405973235|gb|EKC37959.1| Protocadherin Fat 1 [Crassostrea gigas]
Length = 3515
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + +DRE+I +Y LN + D+ P+ + +T+ + D NDN PEF +A++ E
Sbjct: 2041 IKLMKPVDREEIPQYILNVYAYDQGIPSLTSTATLTIEILDENDNPPEFVLSQYAAAVPE 2100
Query: 62 NAEIGS 67
NA +G+
Sbjct: 2101 NATVGT 2106
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECV--SLITLTLTDINDNAPEFASVINSASI 59
LK+ +DREK +R+ HV D P + + + + +TD+NDN+P F+ A I
Sbjct: 684 LKSKVSIDREKFSRFEFLVHVTDSGNPQLHALEPARVVINITDVNDNSPMFSHPEFQADI 743
Query: 60 L 60
L
Sbjct: 744 L 744
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + ++ + V+D+ P+ + + + + D ND+ P+F S + AS+ E + IG
Sbjct: 374 ALDREVMTQHKMTIMVRDQGFPSNRNFTRVMVNVQDENDHPPQFVSDVTEASVFETSAIG 433
Query: 67 S 67
+
Sbjct: 434 T 434
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE I +Y L ++D P +++T+ + D+ND P F+ +A++
Sbjct: 2250 EISIRTPLDREMIDKYKLVVEIRDSGLPPLSSTAVVTVDIEDVNDCPPLFSESSYNATVQ 2309
Query: 61 ENAEIG 66
E+ +G
Sbjct: 2310 EDQYVG 2315
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T++ LDREK Y L D + + +T+ DINDN PEF A I E+A
Sbjct: 268 TSKRLDREKRDHYNLTVMATDGIH---QTSVKVYVTVLDINDNTPEFTQSEYKADISESA 324
Query: 64 EIGS 67
IGS
Sbjct: 325 AIGS 328
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LDRE + Y L D + + + +TD+NDN P F+ S+LE
Sbjct: 2146 IRVANDLDREVTSVYFLTVMATDLSDSPLSSSTYVRINITDVNDNKPFFSQASYRTSLLE 2205
Query: 62 NAEIGSL 68
+ +G L
Sbjct: 2206 DTAVGQL 2212
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + + + V D C I + L+D+NDNAPEF + +LE+A + +
Sbjct: 1947 LDRETQSHH--HVVVSAVDGGGLSCDVDIYIELSDVNDNAPEFVDLPEKFGLLESATVNT 2004
Query: 68 L----STVNATIGVNR 79
L + + +G+NR
Sbjct: 2005 LLLRITAEDRDLGINR 2020
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T + LDRE+ R+T+ V D P+ + + + + D+ND PEF
Sbjct: 61 TRKKLDREREDRHTVQVVVTDSGYPSLSSTAHVVVEVLDVNDKKPEF 107
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASILENAEI 65
LDREK Y L + + + + VS +T+T+TD NDN P F+ ++ E+A
Sbjct: 1739 LDREKQEVYNLTVQAEQKFGMSTQVVSNSTVTVTVTDCNDNPPVFSQAQYQTAVNEDALS 1798
Query: 66 GSL 68
G++
Sbjct: 1799 GTV 1801
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE ARY L A DR PA + + + D+ND+ P F I E
Sbjct: 978 IRTAKALDRESTARYNLKAVAVDRGSPALSSTISVVIKIEDVNDSPPTFEKEKIVLYIPE 1037
Query: 62 NAEIGS 67
N+ IGS
Sbjct: 1038 NSPIGS 1043
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LDRE+ ++Y D +P + + LT+TD+NDN P F A I E+
Sbjct: 662 TVKQLDREQCSKYQFVVVASDSGEPPKSASATVILTVTDVNDNDPYFEPKSYEAVIAEDD 721
Query: 64 EIGS-LSTVNAT 74
G+ ++TV AT
Sbjct: 722 PPGTPVTTVTAT 733
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE Y L +D P + + +++TD+NDNAP F SV ++ E
Sbjct: 874 ITTTKPLDREMDKGYLLTITAKDGGVPPMSDTTDVEISVTDVNDNAPTFDSVQYQGAVRE 933
Query: 62 NAEIG-SLSTVNAT 74
+ IG S+ V AT
Sbjct: 934 DVLIGTSVLKVTAT 947
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E + Y + QD PA + + + + D+NDN P F + + ++ E+ I
Sbjct: 553 KPLDYETVKNYKIIVRAQDGGMPAKSNTTQLLVRVKDVNDNVPRFHTTLFQEAVSESVSI 612
Query: 66 G 66
G
Sbjct: 613 G 613
>gi|426242565|ref|XP_004015142.1| PREDICTED: cadherin-1 [Ovis aries]
Length = 883
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN P+F + S+LE
Sbjct: 214 LKVTQPLDREHIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKGSVLE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F + S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFDPTTYTGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>gi|380805467|gb|AFE74609.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor, partial
[Macaca mulatta]
Length = 186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE ++ Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 24 VRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 83
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 84 NSIVGSV 90
>gi|292620527|ref|XP_002664327.1| PREDICTED: protocadherin gamma-A7-like [Danio rerio]
Length = 770
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + RY + +D QP V IT+ ++D+NDN+P+F+ + + E
Sbjct: 388 LVTASSLDRESVPRYDITLLAKDAGQPPLSSVKTITVQVSDVNDNSPQFSLSPYAFYVFE 447
Query: 62 NAEIGSL 68
N G L
Sbjct: 448 NNIAGKL 454
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE ++ L D +P I + + D+NDN P F + S ++ EN +G
Sbjct: 180 LDRETSRKHKLVLTALDGGRPPKSGTMEIIVDVLDVNDNMPVFTQEVYSVTLKENVPVGT 239
Query: 67 SLSTVNAT 74
++ VNAT
Sbjct: 240 TVIQVNAT 247
>gi|157833875|pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The
Calcium Bound State, Nmr, 20 Structures
Length = 146
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 62 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 121
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 122 GAVPGTSVMKVSAT 135
>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
Length = 4557
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LD E + L +D PA V+ + + +TD+NDNAP+F+ V+ SA I E
Sbjct: 3294 ISISESLDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISE 3353
Query: 62 NAEIG 66
+A IG
Sbjct: 3354 DAAIG 3358
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK+ LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3085 ELKSLAPLDREKIPVYNLVARATDGG--GRFCQSEIHLILEDVNDNPPVFSSDHYTACVY 3142
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +GVNR
Sbjct: 3143 ENTATKALLTRVQATDPDVGVNR 3165
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+I+ Y+L +D P + + ++D+NDN+P F +A I E
Sbjct: 3399 VKVKKKLDRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQE 3458
Query: 62 NAEIGS 67
N +G+
Sbjct: 3459 NKPVGT 3464
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDREK Y LN + D P L+T+T+ D NDN P F S +ILE
Sbjct: 784 LKVLMPLDREKTDLYILNITIYDLGNPQKSAWRLLTVTVGDANDNKPIFLQDSYSVNILE 843
Query: 62 NAEIGS 67
+ +G+
Sbjct: 844 STSLGT 849
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 1519 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTSPLYEASVYE 1578
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1579 SAAVGS 1584
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E I + +L D P L+++++TD+NDN P F +I + + E A
Sbjct: 2349 TARMLDHELIQQCSLKVRATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIYESYVSELA 2408
Query: 64 EIGSLST 70
G T
Sbjct: 2409 PRGHFVT 2415
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S +T+ +TD+NDN P F+ + +
Sbjct: 1834 IRTIANLDHETIAHFHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVFETVL 1893
Query: 60 LENAEIG 66
L +G
Sbjct: 1894 LLPTYVG 1900
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A YTL +D+ + + S++ L L D+ND +P F + +LE+
Sbjct: 890 ADQLDRETKANYTLKIEARDKAESGHQQFSVVPLKVFLDDVNDCSPAFIPSSYNVKVLED 949
Query: 63 AEIGSL 68
+G++
Sbjct: 950 LPVGTV 955
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +T D + + +L+++ +TDINDNAP F + S+
Sbjct: 2876 ISTLKDLDHEKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVFEHEVYRGSVK 2935
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2936 ESDPPGEVVAVLST 2949
>gi|326673371|ref|XP_003199862.1| PREDICTED: protocadherin alpha-8-like [Danio rerio]
Length = 795
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ S+I + + DINDNAP F+ + S+
Sbjct: 190 ELVLQKALDREKKPAIQLTLTAVDGGTPSKTGTSIIMVRVLDINDNAPAFSKPLYKTSVF 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA IG +++ +NAT
Sbjct: 250 ENAAIGTTIAVLNAT 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE ++ Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1194 VRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1253
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1254 NSIVGSV 1260
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 560 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 619
Query: 62 NAEIG 66
N E G
Sbjct: 620 NVEEG 624
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 889 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 948
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 949 -SVVSVT 954
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 776 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSV 835
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 836 LENAPLGHSVIHIQAVDADHGEN 858
>gi|297295324|ref|XP_002804588.1| PREDICTED: protein dachsous-like [Macaca mulatta]
Length = 2233
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 1482 ELVLEQQLDREAQTRHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 1541
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 1542 ENAPIGTLLLRLNAT 1556
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP F + +A ILE
Sbjct: 1695 LLTSQPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYILE 1754
Query: 62 NAEIGSL 68
N GSL
Sbjct: 1755 NRPPGSL 1761
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LKT+ LDRE + Y L+ +D P+ ++++ + ++DINDN P+ + I E
Sbjct: 409 LKTSADLDRETVPEYNLSITARDAGTPSLSALTIVRVQVSDINDNPPQSSQSSYDVYIEE 468
Query: 62 N 62
N
Sbjct: 469 N 469
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 1597 IDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 1654
Query: 66 GSL 68
G++
Sbjct: 1655 GTV 1657
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ L D PA I +T+ D NDNAP F + A +L
Sbjct: 195 ELVLERALDREREPSLQLVLTALDGGTPALSASLPIHITVLDANDNAPVFNQSLYRARVL 254
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 255 EDAPSGT 261
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + Y L D P + + +++ D+NDNAP F S+L
Sbjct: 1050 ELLLEKPLDREKQSDYRLVLIAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVL 1109
Query: 61 ENAEIG 66
E+A G
Sbjct: 1110 ESAPAG 1115
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + Y + D P I L ++D+NDN P F + + E
Sbjct: 1264 LVTAGPLDREAKSSYDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPE 1323
Query: 62 NAEIGSL 68
N G L
Sbjct: 1324 NNRPGDL 1330
>gi|301753511|ref|XP_002912642.1| PREDICTED: protocadherin gamma-A4-like [Ailuropoda melanoleuca]
Length = 817
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE+++ Y D P + I+L + DINDN P F SA I E
Sbjct: 404 LLTSRTLDREEVSEYNFTVTATDHGTPPLSTETHISLQVADINDNPPAFPHASYSAYIPE 463
Query: 62 N----AEIGSLSTV------NATIGVNRCGHTFRGKDLRCY 92
N A I S+S NA + + TF G L Y
Sbjct: 464 NNPRGASILSISAQDPDSIENARVTYSLAEDTFHGMPLSSY 504
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y ++ V+ D P S + +T+ D+NDNAPE ++SI E + G+
Sbjct: 307 LDYEDSGFYDID--VEAHDGPGLRARSKVLVTVLDVNDNAPEVTVTSLTSSIQETSSPGT 364
Query: 68 L 68
+
Sbjct: 365 V 365
>gi|281345413|gb|EFB20997.1| hypothetical protein PANDA_000354 [Ailuropoda melanoleuca]
Length = 2272
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + D P + ITL + DINDN P F+ SA + E
Sbjct: 404 LVTARSLDREQVSEYNITLRATDGGNPPLSTSTHITLYVADINDNPPAFSQSSYSAYVSE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---- 62
LDRE++A Y + D+ +P+ + ITL ++DINDN P F + EN
Sbjct: 1131 ALDREQMAEYNVTITATDKGKPSLFSSTSITLHISDINDNVPVFHQASYVVHVAENNPPG 1190
Query: 63 AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
A I +S + +G N R ++ DL
Sbjct: 1191 ASIAQVSAFDPDLGHNGRVSYSIVASDL 1218
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREQKKVHQLVLIASDGGNPVRSGNLCIQVIVLDANDNPPVFTQPEYQVSVP 252
Query: 61 ENAEIG-SLSTVNAT 74
EN +G +L TVNAT
Sbjct: 253 ENLPVGTTLLTVNAT 267
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D P + I + +TD NDNAP F S+
Sbjct: 915 ELLLEKPLDRERQSSHQLILTAMDGGDPPLSGTTQIRIQVTDANDNAPVFRQDTYKVSLQ 974
Query: 61 ENAEIGS 67
EN G+
Sbjct: 975 ENVPSGT 981
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LD EK +RY L +D C + + + D NDNAPE + +S I
Sbjct: 1022 DITTNGTLDFEKTSRYMLVVEARDGGMHTAHCN--VQIEIVDENDNAPEVMLMSSSNQIP 1079
Query: 61 ENAEIGSL 68
E++ +G++
Sbjct: 1080 EDSNLGTV 1087
>gi|148237348|ref|NP_001079693.1| protocadherin 8, gene 2 precursor [Xenopus laevis]
gi|28839624|gb|AAH47955.1| Papc protein [Xenopus laevis]
Length = 979
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE IA YTL +D P+ + T+ ++D NDNAP F+ ASILEN
Sbjct: 411 TTSALDRENIAEYTLTVVAEDLGFPSLKTKKYYTVKVSDENDNAPVFSKPQYEASILENN 470
Query: 64 EIGSLST 70
GS T
Sbjct: 471 APGSYIT 477
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE Y + D P+ +++ + + D NDN+P F + ++
Sbjct: 189 DLVLMRELDREIQPTYIMELLAMDGGVPSLSGTAVVNIRVLDFNDNSPVFERSTIAVDLV 248
Query: 61 ENAEIGSL 68
E+A +G L
Sbjct: 249 EDAPLGYL 256
>gi|48425245|pdb|1Q1P|A Chain A, E-Cadherin Activation
Length = 212
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 59 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 118
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 119 GAVPGTSVMKVSAT 132
>gi|410909488|ref|XP_003968222.1| PREDICTED: cadherin-6-like [Takifugu rubripes]
Length = 778
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE+ A YTLNA V DR+ A E + + + DINDNAP+F+ I AS+
Sbjct: 102 DIHATKRLDREEKAMYTLNAKVLDRNTNAELEPDTEFNIKIHDINDNAPKFSKEIYFASV 161
Query: 60 LENAEIG-SLSTVNAT 74
E +++G ++ T+ A+
Sbjct: 162 PEMSDVGTTVVTITAS 177
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + ++ + + P + + + D+NDNAPEFA+ ++ + E
Sbjct: 431 ITTLKALDREMSKWHNISVVATEINNPGQTTRVPVFIKVLDVNDNAPEFATSYDTF-VCE 489
Query: 62 NAEIGSLSTVNATIGVN--RCGHTF 84
N + G L + + + + GH F
Sbjct: 490 NVKAGQLIQTISAVDTDEPQVGHKF 514
>gi|326914508|ref|XP_003203567.1| PREDICTED: protocadherin Fat 3-like [Meleagris gallopavo]
Length = 3426
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LD E + L +D PA V+ + + +TD+NDNAP+F+ V+ SA I E
Sbjct: 2163 ISISESLDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISE 2222
Query: 62 NAEIG 66
+A IG
Sbjct: 2223 DAAIG 2227
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK+ LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 1954 ELKSLAPLDREKIPVYNLVARATDGG--GRFCQSEIHLILEDVNDNPPVFSSDHYTACVY 2011
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +GVNR
Sbjct: 2012 ENTATKALLTRVQATDPDVGVNR 2034
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+I+ Y+L +D P + + ++D+NDN+P F +A I E
Sbjct: 2268 VKVKKKLDRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQE 2327
Query: 62 NAEIGS 67
N +G+
Sbjct: 2328 NKPVGT 2333
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 388 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTSPLYEASVYE 447
Query: 62 NAEIGS 67
+A +GS
Sbjct: 448 SAAVGS 453
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E I + +L D P L+++++TD+NDN P F +I + + E A
Sbjct: 1218 TARMLDHELIQQCSLKVRATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIYESYVSELA 1277
Query: 64 EIGSLST 70
G T
Sbjct: 1278 PRGHFVT 1284
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S +T+ +TD+NDN P F+ + +
Sbjct: 703 IRTIANLDHETIAHFHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVFETVL 762
Query: 60 LENAEIG 66
L +G
Sbjct: 763 LLPTYVG 769
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +T D + + +L+++ +TDINDNAP F + S+
Sbjct: 1745 ISTLKDLDHEKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVFEHEVYRGSVK 1804
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 1805 ESDPPGEVVAVLST 1818
>gi|196049622|pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|326673369|ref|XP_003199861.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 796
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + +Y + +D P+ V +I + ++D+NDNAP FAS + A + EN+ G+
Sbjct: 411 LDRENVTQYNVTVIAEDEGSPSMSRVKVIRVEVSDVNDNAPRFASSVEYAYLRENSNSGT 470
Query: 68 L 68
+
Sbjct: 471 V 471
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDREK + L D PA +I + + D NDNAP FA + SI
Sbjct: 191 ELVLQHALDREKNSFIDLLVTALDGGSPAKTGTLMIKVNVLDANDNAPAFAKSLYKVSIT 250
Query: 61 ENAEIGSLST 70
EN +L T
Sbjct: 251 ENTPSDTLIT 260
>gi|62510869|sp|Q5DRB6.1|PCDG4_PANTR RecName: Full=Protocadherin gamma-A4; Short=PCDH-gamma-A4; Flags:
Precursor
Length = 931
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA + E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYVPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVH 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTLLLTVKAT 267
>gi|333361417|pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a
gi|333361418|pdb|3QRB|B Chain B, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|293343041|ref|XP_001065084.2| PREDICTED: protocadherin beta-14 [Rattus norvegicus]
gi|293354900|ref|XP_001055753.2| PREDICTED: protocadherin beta-14 [Rattus norvegicus]
gi|149017301|gb|EDL76352.1| rCG49606 [Rattus norvegicus]
Length = 798
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A+ L D P + + + + DINDNAPEFA + +
Sbjct: 194 ELVLDKALDREKQAQIRLTLTALDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 253
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 254 ENSPVGSL 261
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 404 LVTERALDRENRAEYNITITVSDLGTPRLTTRHTITVQVSDINDNAPAFTQTSYTMFVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 464 NNSPALHIGTISATDSDSGSN 484
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+ Y + D + +C + + +TD+NDNAPE + + I
Sbjct: 301 EIRVRKLLDFEETQSYRMEIEASDGGGLSGKCT--VVINVTDVNDNAPELTMSLLVSDIP 358
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGK 87
EN S TV A G++ GK
Sbjct: 359 EN----SPETVVAVFGISDPDSGDNGK 381
>gi|397517972|ref|XP_003829177.1| PREDICTED: protocadherin gamma-A4 [Pan paniscus]
Length = 820
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA + E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYVPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVH 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
>gi|290560545|pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension
gi|290560546|pdb|3LNG|B Chain B, Crystal Structure Of E-Cadherin Ec12 Aa Extension
Length = 215
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 62 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 121
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 122 GAVPGTSVMKVSAT 135
>gi|47209298|emb|CAF94673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3417
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y + D P V ++T+ ++DINDN P FA ASILE
Sbjct: 375 LVTDEPLDREFQSEYNITITASDAGSPPLASVKILTIVVSDINDNPPTFAQKEYDASILE 434
Query: 62 NAEIGSL 68
N +G+
Sbjct: 435 NQPVGTF 441
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A + L + D PA S I + + D NDN P F+ + A ++
Sbjct: 164 ELVLKKALDREAQAEHVLKINGIDGGSPARTGTSSIHVRVLDANDNVPVFSQRVYKAFVM 223
Query: 61 ENAEIGSLST-VNAT 74
EN++ G++ T +NAT
Sbjct: 224 ENSDTGTVITRLNAT 238
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE ++ Y + D PA + ++D+NDNAP F + SA ++EN G
Sbjct: 1959 LDRESVSDYNITVIASDAGTPALSTKKNFNIKISDVNDNAPVFPQAVYSAYVVENNSPG 2017
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
DRE + Y + D P ++ L ++D+NDNAP F SA I EN G+
Sbjct: 1079 FDRESVPEYNITVTATDSGSPPLSASKMLHLVISDVNDNAPIFERQRYSAYITENNSPGA 1138
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE ++ Y + V D+ P I + ++D+ND+ P+F S ++ EN G
Sbjct: 3073 LDRESVSEYNITITVSDQGSPPLSSTKHINVKVSDVNDSPPKFDQAEYSKAVPENNSPGL 3132
Query: 67 SLSTVNAT 74
S+ V+AT
Sbjct: 3133 SVFAVSAT 3140
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE R +L D P + +T+ D NDNAP F + A+++
Sbjct: 1742 EMVLQKPLDRESDPRLSLKVIAVDGGAPQRSATVDVHVTVLDGNDNAPVFNQSVYKATVM 1801
Query: 61 ENAEIGS-LSTVNAT 74
EN+ + ++TVNA+
Sbjct: 1802 ENSPADTYVTTVNAS 1816
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDREK +TL D +P I +T+ D NDNAP + + A I
Sbjct: 2856 EMVLQNALDREKQETHTLVLIGSDGGEPHRSGTVRIHITVLDANDNAPVCSQPVYRAEIR 2915
Query: 61 ENAEIGS-LSTVNAT 74
EN+ G+ ++TV AT
Sbjct: 2916 ENSPGGTVVTTVKAT 2930
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ +L D P I +++ D NDN P F I +S++
Sbjct: 862 EMVLQKPLDRERHPHLSLKLIAVDGGTPQRSGTVNIDVSVLDANDNIPVFNQDIYKSSVI 921
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ TV+AT
Sbjct: 922 ENTSKGTSVMTVSAT 936
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE ++ Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1090 VRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1149
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1150 NSIVGSV 1156
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 456 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 515
Query: 62 NAEIG 66
N E G
Sbjct: 516 NVEEG 520
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 785 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 844
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 845 -SVVSVT 850
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 672 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSV 731
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 732 LENAPLGHSVIHIQAVDADHGEN 754
>gi|449490371|ref|XP_002196098.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Taeniopygia guttata]
Length = 2548
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE + Y+ QD P+ + +++T+ D+NDN+PEF SA + E+A
Sbjct: 816 ASELDREVVDFYSFRVEAQDHGTPSMASTASVSVTILDVNDNSPEFTQREYSARLNEDAA 875
Query: 65 IG-SLSTVNA 73
+G S+ TV+A
Sbjct: 876 VGTSVLTVSA 885
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E +TL QD +P +S L+T+ + D+NDNAP F S A++LEN +G
Sbjct: 713 LDYEVTKEFTLRIRAQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVG 772
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A D+ PA I +T+ D+NDN P F + E
Sbjct: 1124 VRTLRRLDRENVPLYCLRAFAMDKGIPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEE 1183
Query: 62 NAEIG 66
N+ IG
Sbjct: 1184 NSPIG 1188
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + D P ++ +T+T++D ND+ P F + S+ E
Sbjct: 494 ISTAAPLDRESKSTHVFRVIAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQLEYRESVRE 553
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 554 NLEVGYEVLTVRATDG 569
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + ++D+NDNAP+F SI E
Sbjct: 1018 VTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRHSYQGSIYE 1077
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 1078 DVPTFTSVLQVSATDRDSGLNGRVFYTFQ 1106
>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1122
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ AR LDRE + Y L A DR P + I + + DINDNAP F + + E
Sbjct: 873 IRIARKLDRENVPVYNLKAFAVDRGVPPLKAAVPIHVVVQDINDNAPVFEKDVLFIDVEE 932
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 933 NSPVGSV 939
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+R LDRE + V D P S +T+T++D ND++P F SI E
Sbjct: 285 ITTSRPLDREFKDTHVFKVTVTDNGSPKRSATSYLTVTVSDTNDHSPVFEQNEYRVSIRE 344
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + T+ AT G
Sbjct: 345 NVEVGFEVMTIRATDG 360
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T +D E A +TL +D P + + + + D NDNAP+F + ++LE
Sbjct: 767 ITTQMEIDYEDQASFTLAIIAKDNGIPQKSDTAYVEIIILDANDNAPQFLRDMYQGTVLE 826
Query: 62 NAEIGS----LSTVNATIGVN-RCGHTFRGKD 88
+A + + +S + N R +TF+G D
Sbjct: 827 DAPVFTSVLQISASDRDSSTNGRVSYTFQGGD 858
>gi|323714623|pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant
gi|323714624|pdb|3Q2N|B Chain B, Mouse E-Cadherin Ec1-2 L175d Mutant
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|348583115|ref|XP_003477320.1| PREDICTED: protocadherin gamma-C5-like [Cavia porcellus]
Length = 944
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A++ L D PA SLI++ + DINDNAP F S +
Sbjct: 193 ELVLEQQLDRETQAKHQLVLTAMDGGTPARSGTSLISIIVLDINDNAPTFQSSALRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE + Y L D P I + ++D+NDNAP F + +A I E
Sbjct: 406 LLTSRPLDREAMPHYVLELLASDAGSPPLHTRLTIRVNISDVNDNAPLFTQQLYTAYIPE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRPPGSL 472
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D NDNAPE AS++N + EN +
Sbjct: 308 VDFEESDFYEIHAKARDQGQPAMEGHCVIQVDIGDANDNAPEVLLASLVN--PVPENIPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|327273598|ref|XP_003221567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Anolis carolinensis]
Length = 2829
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A Y+L A DR P + I +T+ DINDN P F + E
Sbjct: 756 IRTLRKLDRENVAVYSLRAFAVDRGSPPLKASVDIQVTVLDINDNPPVFEQDEFDIYVEE 815
Query: 62 NAEIGS----LSTVNATIGVN 78
N+ +GS +S V+ G N
Sbjct: 816 NSPVGSIVARISAVDPDEGTN 836
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E I YTL QD +P ++++ + D+NDNAP F S A++LEN +G
Sbjct: 334 LDYETIREYTLRIKAQDGGRPPQINSSGMVSIQVLDVNDNAPIFVSTPFQATVLENVPVG 393
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +++T+ D+NDN+P F + + E+A +GS
Sbjct: 451 LDRETVENYHFGVEARDHGIPVMTSSASVSITVLDVNDNSPTFTEKVYQLRLNEDAVVGS 510
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LDRE + L D+ P + +T+T++D ND+ P F +I
Sbjct: 114 VTTTRSLDRETKDTHVLQVTATDQGAPRHRSATTFLTVTVSDTNDHGPVFEQPEYRENIR 173
Query: 61 ENAEIG-SLSTVNAT 74
EN E+G + T+ AT
Sbjct: 174 ENLEVGYEVLTIRAT 188
>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
Length = 3584
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+ LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A
Sbjct: 960 TSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDA 1019
Query: 64 EIGS----LSTVNATIGVN 78
+G+ ++ + +G+N
Sbjct: 1020 LVGTSVIQVAASDPDVGLN 1038
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P F S + + E
Sbjct: 1064 IRTNKGLDRESVAVYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFPSDKITLYVPE 1123
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1124 NSPVGSV 1130
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ AR+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 745 VQTIKPLDREEQARFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 804
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 805 DQPPGTPVTTVTAT 818
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 639 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 698
Query: 61 ENAEIG 66
EN +G
Sbjct: 699 ENVPVG 704
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 850 ITIAQSLDYKQEKRFVLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 907
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 908 DAPVGTTVLVVSATDSDVGVN 928
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+ LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A
Sbjct: 961 TSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSILEDA 1020
Query: 64 EIGS----LSTVNATIGVN 78
+G+ +S + IG+N
Sbjct: 1021 LVGTSVIQVSASDPDIGLN 1039
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ +R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQSRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
>gi|61696132|ref|NP_001013428.1| protocadherin beta-4 precursor [Pan troglodytes]
gi|62510882|sp|Q5DRD0.1|PCDB4_PANTR RecName: Full=Protocadherin beta-4; Short=PCDH-beta-4; Flags:
Precursor
Length = 795
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP FA + + E
Sbjct: 402 LVTERPLDRETSAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFAQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 462 NNSPALHIGSVSATDRDSGTN 482
Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++L D P ++ + + DINDNAPEF +L
Sbjct: 192 DLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQVL 251
Query: 61 ENAEIGS 67
EN+ + S
Sbjct: 252 ENSPLDS 258
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDREKI Y N V+ D C S + L L D+NDN P F+S SA +
Sbjct: 3080 ELKTLALLDREKIPVY--NLIVRATDGGGRFCQSEVHLILEDVNDNPPVFSSDHYSACVY 3137
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +GVNR
Sbjct: 3138 ENTATKALLTRVQATDPDVGVNR 3160
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LD E + L D PA V+ + + LTD+NDNAP+F + SA I
Sbjct: 3288 EISVIEELDYELCKDFYLVVEAADGGTPALSAVATVNVNLTDVNDNAPQFNQEVYSAVIS 3347
Query: 61 ENAEIG 66
E+A +G
Sbjct: 3348 EDASVG 3353
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + +++ D ND++P F S + AS+ E
Sbjct: 1514 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVSVEDANDHSPYFTSPLYEASMFE 1573
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1574 SAALGS 1579
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE+ Y LN + D +P L+T+ + D NDN P F S ++L
Sbjct: 778 QLRVLMPLDREQTDLYLLNITIYDLGKPQRSSWRLLTVNVEDANDNRPVFLQESYSVNVL 837
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 838 ESSGIGT 844
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + R TL D P L+T+ +TD NDN P F +I + + E A
Sbjct: 2344 TARLLDHESVQRSTLKVRATDSGFPPLSSEVLVTIFVTDTNDNPPVFNQLIYESYVSELA 2403
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + + S++TL L D+ND P F +S +LE+
Sbjct: 885 ADQLDRESKANYSLKIEARDKAESSQQQFSVVTLRVFLDDVNDCPPAFIPSSSSVKVLED 944
Query: 63 AEIGSL 68
+G++
Sbjct: 945 LPVGTV 950
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD E +T D + + + + +T+TD+NDNAP FA + +
Sbjct: 2871 ISTLRDLDHEADPMFTFAVVASDLGEAVSLSATASVAVTVTDVNDNAPAFAHEVYRGHVK 2930
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2931 ESDPPGEVVAVLST 2944
>gi|290560542|pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e
Length = 213
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
>gi|444525562|gb|ELV14088.1| Protocadherin gamma-C5 [Tupaia chinensis]
Length = 868
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + YT+ D P I L ++D+NDNAP FA + +A I E
Sbjct: 406 LLTSQPLDREATSHYTVQLLASDAGSPPLHTRLTIRLNISDVNDNAPHFAQQLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + D+NDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGIPARSGTTLISVIVLDVNDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N + EN +
Sbjct: 308 VDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVN--PVPENTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|395527524|ref|XP_003765894.1| PREDICTED: protocadherin-8-like [Sarcophilus harrisii]
Length = 1077
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +DR P V T+ + D NDNAP FA + S+ EN
Sbjct: 447 TAAPLDRERISEYNLTLVAEDRGSPPLRTVRPYTVRVGDENDNAPLFARPVYEVSVRENN 506
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 507 SPGAYLTTVVA 517
>gi|10120803|pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain
gi|10120804|pdb|1FF5|B Chain B, Structure Of E-Cadherin Double Domain
Length = 219
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 61 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 120
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 121 GAVPGTSVMKVSAT 134
>gi|1942715|pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium
gi|1942716|pdb|1EDH|B Chain B, E-Cadherin Domains 1 And 2 In Complex With Calcium
Length = 226
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 62 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 121
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 122 GAVPGTSVMKVSAT 135
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
GLDRE YTL D + +T+ DINDNAP F
Sbjct: 180 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVF 223
>gi|26331200|dbj|BAC29330.1| unnamed protein product [Mus musculus]
Length = 784
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTXYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|149640332|ref|XP_001506771.1| PREDICTED: protocadherin alpha-6 [Ornithorhynchus anatinus]
Length = 842
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + + EN GS
Sbjct: 415 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPVYTVLVKENNPPGS 474
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 475 HIFTVSA 481
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE++ + L D +P + +T+ D NDNAP+F +L
Sbjct: 195 DLLLRKSLDREEVPEHHLVLTATDGGKPELTGSVELVVTVLDANDNAPQFDRSEYEVKLL 254
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 255 ENTANGTL 262
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ A LD E Y + D+ P + + + D NDNAPE A S +
Sbjct: 303 EIRVAGELDTENTNSYEIPVEAVDKGNPPLSGHCKVLVEILDTNDNAPEIAVTSLSLPVR 362
Query: 61 ENAEIGSLSTVNATIGVN 78
E+A G TV A I V+
Sbjct: 363 EDALPG---TVIALISVS 377
>gi|313242357|emb|CBY34510.1| unnamed protein product [Oikopleura dioica]
Length = 895
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A+ LDRE++ Y ++ D P I++ + D+NDNAP F + +ILE
Sbjct: 397 LKVAKPLDRERVHLYRIDLRAADNGSPPLTTTKTISIKVEDVNDNAPFFQRDMYHVNILE 456
Query: 62 NAEIG-SLSTVNAT 74
N ++G S+ ++ AT
Sbjct: 457 NNDVGKSIVSLKAT 470
>gi|344265052|ref|XP_003404601.1| PREDICTED: protocadherin beta-3-like [Loxodonta africana]
Length = 782
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE++ +L D P + I + + DINDNAPEFA + IL
Sbjct: 193 ELVLDKALDREELPELSLTLTALDGGSPPRSGTARINILVLDINDNAPEFAQPLYEVQIL 252
Query: 61 ENAEIGS-LSTVNAT 74
EN+ + S + TV+AT
Sbjct: 253 ENSPLNSVIVTVSAT 267
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDREK +Y + V D P E I + ++D+NDNAP F + + E
Sbjct: 403 LVSKGALDREKRDQYNITITVTDLGTPRLETQHNIMVWVSDVNDNAPTFTQTSYTLFVRE 462
Query: 62 -NAEIGSLSTVNAT 74
N+ + TV+AT
Sbjct: 463 NNSPALHMGTVSAT 476
>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oryzias latipes]
Length = 3810
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1495 VRTVRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVFPADDFEVLVKE 1554
Query: 62 NAEIGS-LSTVNAT 74
N+ +GS +S + AT
Sbjct: 1555 NSAVGSVVSQITAT 1568
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E YTL QD +P ++++ +TD+NDN P F S AS+
Sbjct: 1077 EIQVVAPLDYESEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASV 1136
Query: 60 LENAEIGS 67
LE+A +GS
Sbjct: 1137 LESAPVGS 1144
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 1190 LDRESVEHYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEYYGRLNEDAAVGT 1249
Query: 67 SLSTVNA 73
S+ TV A
Sbjct: 1250 SVVTVTA 1256
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + + D P +++T+T++D ND++P F +I E
Sbjct: 863 ITTTQMLDREHMDLHHFRVTATDHGSPRLSGTTMVTITVSDRNDHSPIFEQSEYRETIRE 922
Query: 62 NAEIG 66
N E G
Sbjct: 923 NVEEG 927
>gi|402872813|ref|XP_003900295.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-16 [Papio
anubis]
Length = 743
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREATAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTFYTFFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVHIEVVDINDNAPEFEQPIYKVRIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSSLGSLVATVSA 266
>gi|431903390|gb|ELK09342.1| Protocadherin-16 [Pteropus alecto]
Length = 2532
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L QD QPA L+T+T+ D ND+AP F S +
Sbjct: 1115 EFGTMRPLDREVEPAFQLRIEAQDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1174
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1175 EDAPAGTL 1182
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+++++ D+ND AP F S + E
Sbjct: 910 LSVVRPLDREQRAEHILTVVASDHGSPPRSATQLLSVSVADVNDEAPAFQQQEYSVLLRE 969
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 970 NSPPGTSLLTLQAT 983
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 1869 LDFESLTQYNLTVAAADRGQPPRSTAVPVTVTVLDVNDNPPVFTRTSYHVAVPEDTPVGA 1928
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F S S + E
Sbjct: 1012 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPE 1071
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1072 GQDPQTLTTLRASDPDVGAN 1091
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 579 EVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 635
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+++A GLD E R L + R A+ S++TLTL D NDNAP F
Sbjct: 1435 VRSAEGLDFEASPRLRLVLQAESRGAFAF---SVLTLTLQDANDNAPRF 1480
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D P VS +T+T+ D+ND+AP F +
Sbjct: 1219 ELRTAIALDREQCPSYAFSVSAVDGAAAGPLSTTVS-VTITVRDVNDHAPTFPT 1271
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L+ AR LD E A++ L D PA +L +T+ + D+ND P F + S S+
Sbjct: 1968 LRLARPLDCETQAQHQLVVQAAD---PAGAHFALAPVTIEVQDVNDYGPAFPLSLLSTSL 2024
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2025 AENQPPGTLVT 2035
>gi|47227101|emb|CAG00463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1078
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE + RY LN + D+ P L+T+ + D NDN P+F SA ILEN+ IG
Sbjct: 598 LDRENLDRYFLNITIYDQGVPQMSSWRLLTVIIEDANDNDPQFYQDSFSALILENSAIGL 657
Query: 67 ---SLSTVNATIGVN 78
S++ + +G N
Sbjct: 658 EVISITAFDRDMGQN 672
>gi|115419|sp|P09803.1|CADH1_MOUSE RecName: Full=Cadherin-1; AltName: Full=ARC-1; AltName:
Full=Epithelial cadherin; Short=E-cadherin; AltName:
Full=Uvomorulin; AltName: CD_antigen=CD324; Contains:
RecName: Full=E-Cad/CTF1; Contains: RecName:
Full=E-Cad/CTF2; Contains: RecName: Full=E-Cad/CTF3;
Flags: Precursor
gi|50765|emb|CAA29488.1| unnamed protein product [Mus musculus]
gi|68533544|gb|AAH98501.1| Cdh1 protein [Mus musculus]
gi|148679425|gb|EDL11372.1| cadherin 1, isoform CRA_a [Mus musculus]
Length = 884
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 216 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 276 GAVPGTSVMKVSAT 289
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 334 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNA 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 RIATLKVT 401
>gi|225753|prf||1312359A cadherin E
Length = 884
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 216 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 276 GAVPGTSVMKVSAT 289
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 334 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNA 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 RIATLKVT 401
>gi|190339732|gb|AAI63309.1| Pcdh2ab3 protein [Danio rerio]
Length = 939
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ S+I + + DINDNAP F+ + S+
Sbjct: 190 ELVLQKALDREKKPVIQLTLTAVDGGTPSKTGTSIIMVRVLDINDNAPAFSKPLYKTSVF 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA IG +++ +NAT
Sbjct: 250 ENAAIGTTIAVLNAT 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSFIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 305 IDFEENNAFEIRAQASDKGQPPVSTQCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 364
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE ++ Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 592 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|73949409|ref|XP_535217.2| PREDICTED: protocadherin gamma-C5 isoform 2 [Canis lupus
familiaris]
Length = 944
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + D+NDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGVPARSGTTLISVIVLDVNDNAPAFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDRETTSHYIIELLASDAGSPPLHAHLTIRLNISDVNDNAPYFTQQLYTAYIPE 465
Query: 62 NAEIGSLSTVNA 73
N GSL + A
Sbjct: 466 NRPPGSLLCIVA 477
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N ILE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCMIQVDVGDANDNAPEVLLASLVN--PILESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|410948493|ref|XP_003980973.1| PREDICTED: protocadherin gamma-A2 [Felis catus]
Length = 819
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + +D +P+ + ITL + DINDN P F + SA I E
Sbjct: 404 LVTTRALDREQFSSYNVTVTAKDGGKPSLSTDAYITLQVADINDNPPTFPHMSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+ A + L D P S I +T+ D+NDNAP F S+
Sbjct: 193 ELVLELALDREEKAVHHLVLVALDGGSPVLSGTSRIHVTVLDVNDNAPIFTQPEYRVSVP 252
Query: 61 ENAEIGS-LSTVNAT 74
E+ +G+ + TV AT
Sbjct: 253 ESMPVGTRILTVTAT 267
>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
Length = 4557
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E R+ L +D PA V+ +++TLTD+NDN P+F+ I SA I E+A +G
Sbjct: 3299 LDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVG 3357
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDRERVPVYNLIARATDGG--GRFCQSDIRLILEDVNDNPPMFSSDHYNACVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDVGINR 3164
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE+ Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLMPMDREQTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPTSYSVKVLED 948
Query: 63 AEIGSL 68
IG++
Sbjct: 949 LPIGTV 954
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 2348 TARMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +++++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVFAHEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|149640344|ref|XP_001506991.1| PREDICTED: protocadherin alpha-13 [Ornithorhynchus anatinus]
Length = 924
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + + EN GS
Sbjct: 415 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPVYTVLVKENNPPGS 474
Query: 68 -LSTVNA 73
+ TV A
Sbjct: 475 HIFTVTA 481
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T +D E I Y + V D+ P +++ + D NDN PE S +
Sbjct: 303 EIRTQGEVDFEDINAYEIQVKVIDKGNPPMAGHCKVSVEILDTNDNTPEITVTPLSLPVR 362
Query: 61 ENAEIGSLSTVNATIGVN 78
E+A G TV A I V+
Sbjct: 363 EDAGPG---TVIALISVS 377
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1799 EFGTTRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1858
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 1859 EDAPVGTL 1866
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F + + E
Sbjct: 1594 LSVVRPLDREQRAEHVLTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRE 1653
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1654 NSPPGTSLLTLKAT 1667
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2553 LDFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA 2612
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 200 ELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 259
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 260 ESLAPGS 266
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + +T+ D ND++P F + S + E
Sbjct: 1696 LTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPE 1755
Query: 62 NAEIGSLSTVNAT 74
+ +L+T+ A+
Sbjct: 1756 GQDPQTLTTLRAS 1768
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + + L VQD P + + + D+NDN+P F +A
Sbjct: 1156 EVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQASGAA 1212
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 421 ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 466
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE-- 61
TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 97 TARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPEHT 150
Query: 62 ------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 151 ALGTRYPLEPAHDADAGRLGTQGYALSGDGAGETFR 186
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL TA LDRE A Y + D ++ IT+T+ D+ND+AP F +
Sbjct: 1903 ELSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPT 1955
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1786 EFGTTRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1845
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 1846 EDAPVGTL 1853
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F + + E
Sbjct: 1581 LSVVRPLDREQRAEHVLTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRE 1640
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1641 NSPPGTSLLTLKAT 1654
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2540 LDFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA 2599
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 187 ELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 246
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 247 ESLAPGS 253
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + +T+ D ND++P F + S + E
Sbjct: 1683 LTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPE 1742
Query: 62 NAEIGSLSTVNAT 74
+ +L+T+ A+
Sbjct: 1743 GQDPQTLTTLRAS 1755
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + + L VQD P + + + D+NDN+P F +A
Sbjct: 1143 EVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQASGAA 1199
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 408 ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 453
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 20/96 (20%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE-- 61
TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 84 TARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPEHT 137
Query: 62 ------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 138 ALGTRYPLEPAHDADAGRLGTQGYALSGDGAGETFR 173
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL TA LDRE A Y + D ++ IT+T+ D+ND+AP F +
Sbjct: 1890 ELSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPT 1942
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE+ Y+L D P +LIT+T++D+NDN P F+ V + +
Sbjct: 3598 EITVRTALDREQTPHYSLTVQAADEGSPPLSSAALITITVSDVNDNPPVFSQVNHHLLLQ 3657
Query: 61 ENAEIGS 67
E +GS
Sbjct: 3658 EGEAVGS 3664
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L+ D + + L + D+NDNAP+ + I AS+ E
Sbjct: 1216 IRTSELLDRETVPHYWLSVFATDLGTEPLVSWTHVFLEVLDVNDNAPQLSQPIYFASVQE 1275
Query: 62 NAE-IGSLSTVNAT 74
N E + S+ ++AT
Sbjct: 1276 NVEKVNSVIQLSAT 1289
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE+ Y + VQD P + + + + D+NDN+P+F ++ S I E++
Sbjct: 2148 TGVAFDREEQDVYDITVKVQDMRDPPRTATTQVKVFIDDVNDNSPQFLNLPFSMMISEDS 2207
Query: 64 EIGSL 68
E G +
Sbjct: 2208 EPGDV 2212
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE Y LN D P L+ + + D+NDN P F +
Sbjct: 898 ELRLVCSLDRESKEFYILNITAYDLGMPQRSVWKLMAVNILDVNDNPPMFDQPRYVIRVP 957
Query: 61 ENAEIGSL 68
EN +GS+
Sbjct: 958 ENTAVGSV 965
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E+ ++ L D + +T+ +TD+NDN P+F S A + E A
Sbjct: 2457 TRKVLDYEERKQFKLKVRATDNGSVPLSSEAFVTINITDVNDNPPDFISSEFKAKVDETA 2516
Query: 64 EIGSL 68
G L
Sbjct: 2517 NCGHL 2521
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ +++ V D PA + + + + D NDN P+F + +LE
Sbjct: 1320 ISTLAALDREEKPEHSIEVVVSDNAAPALRSTATVVIKVLDSNDNRPKFTDKLFHVQLLE 1379
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ A +TL V+D++ P + + + + D ND++P F S ASI A GS
Sbjct: 1637 LDFERTAVHTLVVMVRDQEIPMKRNFAKVVIHVEDCNDHSPAFLSPRYEASISNQAPTGS 1696
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE R+TL D +E + + + D+NDN+P ++ + +++EN+
Sbjct: 3101 LDRETKDRFTLRVTATD---GKFEAAVTVEIHVLDLNDNSPTCEQLLYTETVMENSSPRR 3157
Query: 65 -IGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
+ +S + +G N +T G D ++L
Sbjct: 3158 FLLKVSASDPDVGANGEISYTLHGPDADKFHL 3189
>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
paniscus]
Length = 3150
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 1102 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 1161
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 1162 NSPIGLAVARVTAT 1175
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 691 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 750
Query: 67 SL 68
L
Sbjct: 751 YL 752
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 791 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 850
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 851 DAAVGTSVVTVSA---VDRDAHS 870
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 470 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 529
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 530 NLEVGYEVLTVRATDG 545
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+
Sbjct: 578 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFS 629
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 996 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 1055
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 1056 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 1084
>gi|410948473|ref|XP_003980963.1| PREDICTED: protocadherin beta-5 [Felis catus]
Length = 724
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 402 LVTEKPLDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 462 NNSPALHIGSVSATDRDSGAN 482
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + +L D P + + + + DINDNAP F + +
Sbjct: 193 ELMLDKSLDREEQSELSLTLTALDGGDPPRSGTTAVRIEVVDINDNAPAFLQSLYEVQVP 252
Query: 61 ENAEIGSLSTV 71
EN+ SL V
Sbjct: 253 ENSPPNSLVVV 263
>gi|444713194|gb|ELW54102.1| Protocadherin gamma-A5 [Tupaia chinensis]
Length = 812
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ + Y + V DR P+ + I+L + D+NDN P F+ S SI E
Sbjct: 403 LLTAMALDREETSDYNITVTVMDRGTPSLSTENHISLKVADVNDNPPAFSRASYSTSIPE 462
Query: 62 NAEIG-SLSTVNAT 74
N G S+ +V A+
Sbjct: 463 NNPRGVSIFSVTAS 476
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK A + L D P + I + + D NDNAP+F +I
Sbjct: 192 ELVLERLLDREKEAVHDLLLTALDGGDPVLSGTTRIRVMVLDANDNAPQFTRPEYRVNIP 251
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLF 95
EN +G+ L TV AT G+N + ++FR ++ + F
Sbjct: 252 ENIPVGTRLLTVTATDPDEGMNGKLTYSFRNEEDKISETF 291
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y L V+ D C + I LTL D+NDN PEF + + ++
Sbjct: 3079 ELRTLALLDREEQAVYHL--LVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVF 3136
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3137 ENTEPGTPLTRVQATDADAGLNR 3159
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EIKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D+ND++P F S + E
Sbjct: 1515 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYE 1574
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1575 SAAVGSV 1581
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ +T+ D NDNAPEF + E
Sbjct: 775 LKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ EI S
Sbjct: 835 DKEINS 840
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ +P ++ + +++T ++ +P+F S SA I E
Sbjct: 1620 IKTARELDRSHQVDYDLMVKATDKGEPPMSEMTSVRISVTVADNASPKFTSKEYSAEISE 1679
Query: 62 NAEIGSL 68
IGS
Sbjct: 1680 AIRIGSF 1686
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ + LDRE A YTL D+ P + +++ DINDN P F A++
Sbjct: 3182 LQLEKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREYGATVS 3241
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3242 EDIVIGT 3248
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2870 ITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2930 EDDPPGGVIAILSTTDA 2946
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3294 LDYESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAAL 3351
>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
Length = 4589
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E R+ L +D PA V+ +++TLTD+NDN P+F+ I SA I E+A +G
Sbjct: 3299 LDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVG 3357
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDRERVPVYNLIARATDGG--GRFCQSDIRLILEDVNDNPPMFSSDHYNACVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDVGINR 3164
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE+ Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLMPMDREQTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPTSYSVKVLED 948
Query: 63 AEIGSL 68
IG++
Sbjct: 949 LPIGTV 954
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 2348 TARMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +++++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVFAHEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P S + + + D NDN+P F SAS+
Sbjct: 2229 QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVA 2288
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2289 ENASIGAM 2296
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1111 LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1170
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1171 FVGKLTAVDRDIGRN 1185
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2767 GLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLE 2821
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2864 EIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2922
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2923 ENAEIGSF 2930
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1982 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 2040
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 2041 PIATEVVTVSA 2051
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 452 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFSM 544
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1550 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1607
Query: 59 IL 60
IL
Sbjct: 1608 IL 1609
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN VQD V+++T+ LTD+NDN P F I EN +G+
Sbjct: 3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGT 3351
Query: 68 L 68
Sbjct: 3352 F 3352
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ + Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2546 EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 2604
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2605 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 2645
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2968 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 3024
Query: 62 NAEIGSLSTVNATIGVNR 79
+ S++ V I +R
Sbjct: 3025 LQQ--SIALVGQIIATDR 3040
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDREK+++Y ++ +D+ P + + + L + D+NDN P+F
Sbjct: 658 QLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2335 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2393
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2394 MENTVPPNGGYVLTVNA 2410
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2447 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPS 2506
Query: 66 GS 67
G+
Sbjct: 2507 GT 2508
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+ + Y L D P + + + L D+NDN P F + I
Sbjct: 3602 EISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYIS 3661
Query: 61 ENAEIGS--LSTVNATIGVNRCGHTF 84
EN G+ ++ + + + R G F
Sbjct: 3662 ENEPAGTSIMTLIASDPDLPRNGGPF 3687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1883 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1939
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1940 QVGQIVARDADLGQN 1954
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS 67
A G+
Sbjct: 282 TALPGT 287
>gi|354500179|ref|XP_003512178.1| PREDICTED: protocadherin beta-7-like [Cricetulus griseus]
Length = 763
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE++A +TL D P +L+ + + DINDN+PEF +
Sbjct: 193 ELVLDQTLDREELAEFTLTLTALDGGSPPRSGTALVRILVLDINDNSPEFVQSLYKVQSY 252
Query: 61 ENAEIGSL 68
EN +GSL
Sbjct: 253 ENTPVGSL 260
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE Y + V D P IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTEMPLDRESHTEYNITITVTDLGTPRLTTQHTITVQVSDVNDNAPAFTQTSYTLFVQE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
chinensis]
Length = 2958
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 841 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 900
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 901 NSPIGLAVARVTAT 914
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 430 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 489
Query: 67 SL 68
L
Sbjct: 490 YL 491
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 530 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 589
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 590 DAAVGTSVVTVSA---VDRDAHS 609
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 209 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 268
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 269 NLEVGYEVLTVRATDG 284
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 317 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 376
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 377 REDVTPGA 384
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y L V+ D C + I LTL D+NDN PEF + + ++
Sbjct: 3079 ELRTLALLDREEQAVYHL--LVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVF 3136
Query: 61 ENAEIGS-LSTVNAT---IGVNR 79
EN E G+ L+ V AT G+NR
Sbjct: 3137 ENTEPGTPLTRVQATDADAGLNR 3159
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EIKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D+ND++P F S + E
Sbjct: 1515 LYTSEKLDHEAIHQHVLTVMVRDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYE 1574
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1575 SAAVGSV 1581
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ +T+ D NDNAPEF + E
Sbjct: 775 LKVLSPLDREVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSE 834
Query: 62 NAEIGS 67
+ EI S
Sbjct: 835 DKEINS 840
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ +P ++ + +++T ++ +P+F S SA I E
Sbjct: 1620 IKTARELDRSHQVDYDLMVKATDKGEPPMSEMTSVRISVTVADNASPKFTSKEYSAEISE 1679
Query: 62 NAEIGSL 68
IGS
Sbjct: 1680 AIRIGSF 1686
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + D+ + + + D+NDNAP+ + + I+E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ + LDRE A YTL D+ P + +++ DINDN P F A++
Sbjct: 3182 LQLEKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREYGATVS 3241
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3242 EDIVIGT 3248
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E+ A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2870 ITTLKELDHEERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2930 EDDPPGGVIAILSTTDA 2946
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3294 LDYESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAAL 3351
>gi|380803815|gb|AFE73783.1| protocadherin gamma-A1 isoform 1 precursor, partial [Macaca
mulatta]
Length = 424
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 282 LVTERTLDRELISGYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 341
Query: 62 NAEIG----------SLSTVNATIGVNRCGHTFRGKDLRCY 92
N G S S NA I + T +G L Y
Sbjct: 342 NNPRGAAIFSVRAHDSDSNENAQIAYSLIEDTIQGAPLSAY 382
>gi|380803071|gb|AFE73411.1| protocadherin gamma-B7 isoform 2 precursor, partial [Macaca
mulatta]
Length = 246
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 55 KLVTDGALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 114
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 115 ENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLESRTL 153
>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Ailuropoda melanoleuca]
Length = 2924
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 874 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 933
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 934 NSPIGLAVARVTAT 947
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 463 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 522
Query: 67 SL 68
L
Sbjct: 523 YL 524
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D P + +++T+ D+NDN P F + + E
Sbjct: 563 ISVAAELDREEVDFYSFGVEARDHGTPMLTASASVSVTILDVNDNNPTFTQPEYTVRLNE 622
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 623 DAAVGTSVVTVSA---VDRDAHS 642
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 242 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 301
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 302 NLEVGYEVLTVRATDG 317
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 350 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 409
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 410 REDVTPGA 417
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 768 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 827
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 828 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 856
>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
[Gorilla gorilla gorilla]
Length = 2911
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 861 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 920
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 921 NSPIGLAVARVTAT 934
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 450 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 509
Query: 67 SL 68
L
Sbjct: 510 YL 511
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 550 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 609
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 610 DAAVGTSVVTVSA---VDRDAHS 629
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 229 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 288
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 289 NLEVGYEVLTVRATDG 304
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 337 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 396
Query: 60 LENAEIGS 67
E+ GS
Sbjct: 397 REDVTPGS 404
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 755 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 814
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 815 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 843
>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Callithrix jacchus]
Length = 2871
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 823 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 882
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 883 NSPIGLAVARVTAT 896
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 412 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 471
Query: 67 SL----STVNATIGVN 78
L V+A G N
Sbjct: 472 YLVLHVQAVDADAGDN 487
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 512 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 571
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 572 DAAVGTSVVTVSA---VDRDAHS 591
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 191 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 250
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 251 NLEVGYEVLTVRATDG 266
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 299 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 358
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 359 REDVTPGA 366
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 717 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 776
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 777 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 805
>gi|148683471|gb|EDL15418.1| mCG114390 [Mus musculus]
Length = 2572
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P + + + D ND++P F + +SI
Sbjct: 1127 ELSTTRALDREQISNFTLTILCSDLGNPPRSSAMQLHVRVLDDNDHSPAFPMLHYQSSIR 1186
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1187 EDAEVGTVVLVLSAVDRDEGLN 1208
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE A + L D P S+I + + DINDNAP F+S A + E+ +G
Sbjct: 1827 ALDREASASHKLVILASDHSCPPLSSTSVIAIDILDINDNAPTFSSRRYQAHVKESTPVG 1886
Query: 67 SLSTV 71
S T+
Sbjct: 1887 SHITM 1891
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA DRE + L V+D P+ + I T+ D ND+APEF + + IL
Sbjct: 1023 EVVTAVTFDREAQGIFRLRVLVRDGGVPSLSSTADIICTIEDENDHAPEFIVLHHDIEIL 1082
Query: 61 ENAEIGSLSTVNA 73
EN + + TV A
Sbjct: 1083 ENRDPEVVYTVLA 1095
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E Y+L DR P +L+ + +TDINDNAP F
Sbjct: 1510 LDYESSGSYSLIVQATDRGVPRLSGTALVKIQVTDINDNAPVF 1552
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASI 59
+L + LD E + Y + +D Q PAW +++ + D N+++P F SI
Sbjct: 428 DLFLTKELDYEMTSHYLIRVISKDHSQSPAWNSTVFLSIDVEDQNEHSPSFQDEFIVISI 487
Query: 60 LENAEIGSLSTV-NATIG 76
EN +G+L V NA G
Sbjct: 488 EENVPVGTLVYVFNAKDG 505
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASI 59
+L + LD E + Y + +D Q PAW +++ + D N+++P F SI
Sbjct: 703 DLFLTKELDYEMTSHYLIRVISKDHSQSPAWNSTVFLSIDVEDQNEHSPSFQDEFIVISI 762
Query: 60 LENAEIGSLSTV-NATIG 76
EN +G+L V NA G
Sbjct: 763 EENVPVGTLVYVFNAKDG 780
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LD E ++ L D PA +T+T+ D+ND P F ++ S+ E
Sbjct: 919 LRIACPLDYEVKTQHILTLVAHDGGMPARSSSQTLTITVLDVNDETPAFKQLLYETSVKE 978
Query: 62 NAEIGSLST 70
N G T
Sbjct: 979 NQSPGVFVT 987
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V D P L+ +T+TDINDN P F
Sbjct: 299 ELINWLALDREHQGHHQITVLVTDHGSPPRNATMLVYVTITDINDNWPFF 348
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST 70
EKI D P+ ++L+ + + D+N+ APEF + + S+ E+ IGS
Sbjct: 1715 EKIPTLRFLVEANDGGIPSLTALTLVEIEIQDVNNYAPEFPAGCYNLSLSEDTPIGSTLM 1774
Query: 71 VNATI 75
+TI
Sbjct: 1775 TFSTI 1779
>gi|348546135|ref|XP_003460534.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
gi|348546137|ref|XP_003460535.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 531
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ Y + D P S+I + ++D+NDNAP+F+S I + + EN+ +G+
Sbjct: 411 LDRETISGYDVTIIASDGGSPPLSSTSIIPIQVSDVNDNAPQFSSSILNIYVKENSHVGT 470
Query: 68 -LSTVNA 73
L TV A
Sbjct: 471 ILKTVTA 477
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P S I + + DINDN P FA + +
Sbjct: 191 ELMLQKVLDREKEPLIKLTLTALDDGSPPKSGTSDIMINVLDINDNTPVFAKSLYKVRVF 250
Query: 61 ENAEIG-SLSTVNAT 74
EN IG ++ T+NAT
Sbjct: 251 ENVPIGTTVLTLNAT 265
>gi|449473946|ref|XP_004176368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Taeniopygia guttata]
Length = 3621
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 532 IRTVRRLDRENVPVYELTAYAVDRGIPPQRTPVHIQVTIQDVNDNAPVFPAEEFEVRVKE 591
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 592 NSIVGSV 598
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P+ + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 227 LDRESVEHYFFGVEAHDHGSPSLSASASVTITVMDVNDNRPEFTQKEYFIRLNEDAAVGT 286
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P + ++ + DIND+AP F S S+
Sbjct: 114 EIQVVAPLDFEVEREYALRIRAQDAGRPPLSNNTGMASIQVVDINDHAPIFVSTPFQISV 173
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 174 LENAPLGHSVIHIQAVDADYGEN 196
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E YTL +D P + + + + D+NDNAP+F S I E+A
Sbjct: 432 LDYEDQVTYTLAITAKDNGIPQKADTTYVEIMVNDVNDNAPQFVSPHYQGMISEDAP--P 489
Query: 68 LSTVNATIGVNRCGHT 83
++V +R HT
Sbjct: 490 FTSVLQISATDRDAHT 505
>gi|119576776|gb|EAW56372.1| cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 2924
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 874 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 933
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 934 NSPIGLAVARVTAT 947
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 463 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 522
Query: 67 SL 68
L
Sbjct: 523 YL 524
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 563 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 622
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 623 DAAVGTSVVTVSA---VDRDAHS 642
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 242 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 301
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 302 NLEVGYEVLTVRATDG 317
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 350 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 409
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 410 REDVTPGA 417
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 768 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 827
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 828 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 856
>gi|13325064|ref|NP_001399.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Homo
sapiens]
gi|22095550|sp|Q9HCU4.1|CELR2_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Cadherin family member 10; AltName:
Full=Epidermal growth factor-like protein 2;
Short=EGF-like protein 2; AltName: Full=Flamingo homolog
3; AltName: Full=Multiple epidermal growth factor-like
domains protein 3; Short=Multiple EGF-like domains
protein 3; Flags: Precursor
gi|9828190|gb|AAG00080.1|AF234887_1 FLAMINGO 1 [Homo sapiens]
gi|21929188|dbj|BAC06168.1| seven transmembrane helix receptor [Homo sapiens]
Length = 2923
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 873 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 932
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 933 NSPIGLAVARVTAT 946
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 462 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 521
Query: 67 SL 68
L
Sbjct: 522 YL 523
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 621
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 622 DAAVGTSVVTVSA---VDRDAHS 641
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 241 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 300
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 301 NLEVGYEVLTVRATDG 316
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 349 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 409 REDVTPGA 416
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 767 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 826
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 827 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 855
>gi|449481209|ref|XP_004177258.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Taeniopygia guttata]
Length = 2675
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A Y+L A DR P + I +T+ DINDN P F + E
Sbjct: 664 IRTLRKLDRENVAVYSLRAFAVDRGSPPLKASVDIQVTVLDINDNPPVFEKDEFDIFVEE 723
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 724 NSPVGSI 730
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E I YTL QD +P ++++ + D+NDNAP F S A++LEN +G
Sbjct: 242 LDYETIREYTLRIKAQDGGRPPLINSSGMVSVQVVDVNDNAPIFVSTPFQATVLENVPLG 301
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + Y +D P + +++T+ D+NDN P F + + E
Sbjct: 353 ITVAAELDRETVENYHFGVEARDHGVPVMTSSASVSITVLDVNDNNPTFTEKVYHLRLNE 412
Query: 62 NAEIGS 67
+A +GS
Sbjct: 413 DAAVGS 418
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILEN 62
TAR LDRE + L D P + +T+T++D ND+ P F SI EN
Sbjct: 24 TARSLDRETKDTHVLKVTASDHGSPRRRSATTYLTVTVSDTNDHEPVFEQPEYRESIREN 83
Query: 63 AEIG-SLSTVNATIG 76
E+G + T+ AT G
Sbjct: 84 LEVGYEVLTIRATDG 98
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTL--NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE+++ Y L A+ Q +D +++ +T+ D NDN P+F+ +
Sbjct: 129 VRTRASVDREEVSEYHLVVEANDQGKDPGPRSATAMVHITVEDENDNYPQFSEKRYLVQV 188
Query: 60 LENAEIGS 67
E+A + S
Sbjct: 189 PEDAPVNS 196
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E A YTL D P + + + + D NDNAP F S+ E
Sbjct: 558 ITTLMELDYEDQASYTLAITAHDNGIPQKSDTTYVEILILDANDNAPRFLRDRYQGSVFE 617
Query: 62 NAEIGS----LSTVNATIGVN-RCGHTFR 85
+ + + LS + G+N R +TF+
Sbjct: 618 DVPLSTSVLQLSATDRDSGLNGRLLYTFQ 646
>gi|301621402|ref|XP_002940044.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
tropicalis]
Length = 790
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREK RY L H D+ P + I L + DINDN P+F A + EN
Sbjct: 395 TTSTLDREKTPRYNLTIHTTDKGSPTLSSLKTIRLDILDINDNPPKFEKSNYVAYVTENN 454
Query: 64 EIGS 67
+ G+
Sbjct: 455 QPGA 458
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + + L D P +LI +T+TD NDN P F + +I
Sbjct: 182 ELILQTSLDRETQSNHELILTASDGGNPVQTGTTLIKITVTDFNDNFPVFTQEVYKVNIH 241
Query: 61 ENAEIGS-LSTVNAT 74
EN I S + VNA+
Sbjct: 242 ENIPIHSTVLQVNAS 256
>gi|327281882|ref|XP_003225674.1| PREDICTED: protocadherin-7-like [Anolis carolinensis]
Length = 1257
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ Y L+ V+D PA +L+ + +TD+NDN+P F + A + EN+ G+
Sbjct: 243 LDREQRDAYELSLRVRDGGDPARSSQALLRVLITDVNDNSPRFEKSVYEADLAENSSPGT 302
Query: 68 ----LSTVNATIGVN 78
L +A GVN
Sbjct: 303 PILQLRAADADAGVN 317
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ Y +D+ P+ + + + L + D NDN P F + + +
Sbjct: 579 EVRVQAVLDREQRDAYEFQVTARDKGTPSLQGSTRVLLRVADRNDNEPRFMQDVFTFYVK 638
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 639 ENLQPNSPVGMVTVMDADKGRN 660
>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 1810
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN V+DR +P L+ +T+ D+NDN P F S+ E
Sbjct: 241 LETTGKLDREQVEFYSLNICVRDRGRPPRLGYLLVNVTVLDVNDNPPVFQQSDYVVSLNE 300
Query: 62 NAEIGS-LSTVNAT 74
+A +G+ + TV+AT
Sbjct: 301 SAPVGTKVLTVHAT 314
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE +A Y + +D+ P + + LTL D+NDN+P F I
Sbjct: 679 QLTTKIALDRETVAEYRILIIAKDQGTPVQSSTATVILTLEDVNDNSPVFYPWKYLMPIS 738
Query: 61 ENAEIGSL 68
E++ G++
Sbjct: 739 EDSPAGTI 746
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE+ Y L D+ P+ + + + + D NDNAPEF + S +
Sbjct: 1100 QLYVKNMLDREERDYYALEVTAFDQGNPSRSSMVPVVMHIIDENDNAPEFTNSSFSFHLR 1159
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN +G LS + +G N
Sbjct: 1160 ENEPPDTFVGKLSATDRDVGRN 1181
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE++ + L DR QP +S L+ + + D+NDNAP F S+ SA
Sbjct: 1529 IHTLLPIDREEVDTFKLIVVATDRAQPPSARLSAEKLVIVIVEDVNDNAPLFVSM--SAV 1586
Query: 59 ILENAEIGSL 68
+L G+L
Sbjct: 1587 VLPPLRAGNL 1596
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE++ Y L D+ P+ + + + D+ND+ P F SA + E A
Sbjct: 473 LDREEVPTYNLTIVASDKGIPSRSVTVYLGIHVNDVNDHEPVFQQSEYSAVLSELAPNGS 532
Query: 65 -IGSLSTVNATIGVN 78
+ S+S +A G+N
Sbjct: 533 FVASISATDADSGLN 547
>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
Length = 3237
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+R LDRE A+YTL QD+ P+ + +++ D+NDN+P F S S + E
Sbjct: 1763 LSTSRALDRESRAKYTLTVEAQDQGIPSLTSTVTLDISVLDLNDNSPVFPSSSYSVEVSE 1822
Query: 62 NAEIGSL 68
+A GSL
Sbjct: 1823 DASAGSL 1829
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE Y L + +D P + + +T+ D NDN P F V S + E
Sbjct: 1659 ITTTKALDREAQGVYALTVYARDGGSPPNFAKTTVRVTVLDENDNRPAFGRVYYSLEVPE 1718
Query: 62 NAEIGSLSTVNAT 74
N E +L T+ AT
Sbjct: 1719 NQEPVTLFTIRAT 1731
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E ++ DR +P +++ + L DINDN P F S +ASI E
Sbjct: 489 VTTLTQLDYEIDPTPSITVVASDRGRPPLSSTAVVKVILQDINDNEPVFGSKFYNASIKE 548
Query: 62 NA 63
NA
Sbjct: 549 NA 550
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPEFASVINSAS 58
++ AR LD EK RYTL V D P + ++LI + + D ND++PEF
Sbjct: 1340 DIYLARELDFEKCPRYTLQVEVDDFSMPLPKSDIITLI-IDVQDSNDHSPEFPEDPIIIV 1398
Query: 59 ILENAEIGS 67
+ EN + GS
Sbjct: 1399 VPENTDPGS 1407
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE + Y L QD P +T+ D NDNAP F++ +L
Sbjct: 1125 EISTKLSLDRELQSSYQLIVVAQDGGTPPRSATGTAFITVLDENDNAPSFSNAQTGRELL 1184
Query: 61 ENAEIGS-----LSTVNA 73
A G L TV+A
Sbjct: 1185 LQALEGQPSGFLLGTVHA 1202
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LD E + Y L V DR P + + + D NDN P F+ SA + E AE
Sbjct: 2504 ADKLDFEIASSYNLTIVVSDRGIPQRSSSVPVLINVMDTNDNPPSFSRAEYSAVVNEGAE 2563
Query: 65 IGS 67
G+
Sbjct: 2564 RGT 2566
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + YTL D P ++ + + DINDNAP F A I EN + G+
Sbjct: 171 LDRETRSSYTLLLEAFDGGSPKRTGQMILDVIVQDINDNAPVFNQSRYHAMISENLQPGN 230
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILEN 62
TA LDREK+A Y + D S + + + D+NDNAP F + ++ N
Sbjct: 1869 TAATLDREKVASYNFQVYAMDSSATNPRNSSAEVAVHILDVNDNAPFFI----TDPLIIN 1924
Query: 63 AEIGSLS 69
I SLS
Sbjct: 1925 VSISSLS 1931
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R +DRE+ Y L +D L+++ + D+ND AP F A I E
Sbjct: 1557 LSILRPIDREEEDLYNLTIVAEDHGLQQRSSSQLLSVQVIDVNDEAPYFQESQYEAFIAE 1616
Query: 62 NAEIGS 67
N GS
Sbjct: 1617 NQPAGS 1622
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE +RY LN D P+ LIT+ + D+NDN P F AS+ E
Sbjct: 895 LAIERRLDRETESRYVLNITATDHGTPSRSASHLITIHVRDVNDNQPRFLQDTYQASVSE 954
Query: 62 NAEIGS----LSTVNATIGVN 78
N G+ ++ ++A G N
Sbjct: 955 NQSPGTSVIQITALDADAGTN 975
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
+KT R LDRE ARY L V+DR P + + + + D+NDNAP F+
Sbjct: 466 IKTKRPLDRETTARYDLVLKVRDRGTPPRTATATLHIVVEDMNDNAPYFS 515
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ +DRE++ YTL DR P + + + D+ND++P F S A I E A I
Sbjct: 1853 QAIDREEVPMYTLRVLASDRGTPERNSTVTVYVLVDDVNDHSPIFNSTQYVAQISEEAVI 1912
Query: 66 GSL 68
G+
Sbjct: 1913 GAF 1915
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ T R LDREK + Y+ +A+ DR ++ +T+ ++D+NDNAP F V +I
Sbjct: 1211 ITTTRLLDREKQSVYSFDAYASDRGPFGPRTSNVRVTVDISDVNDNAPVFTQVPFETTIE 1270
Query: 61 EN 62
N
Sbjct: 1271 RN 1272
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE Y L D+ P + + +++ DINDN P F ++LE AE+GS
Sbjct: 1534 MDREVRDSYRLELRAVDKGTPRLTGSATLRISVVDINDNRPTFPEPYPPVNVLEGAEVGS 1593
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L+ D P E + + + +TD NDNAP F + S + E
Sbjct: 576 ITTNAPLDREQKPTYVLSVAAVDGGTPPRERTTFVHIHVTDSNDNAPVFVNSTISIEVEE 635
Query: 62 NAEIGS 67
E GS
Sbjct: 636 GLEAGS 641
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LD E ++ LN + P + + + +T+ DINDN PEF S +I EN
Sbjct: 154 TQLNLDHETVSSLLLNIQASSGNPPVYG-RAQVNITILDINDNRPEFTVATESVAITENV 212
Query: 64 EIGSL 68
G++
Sbjct: 213 SPGTI 217
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE Y L +D P + + +T+TD NDN P F S++EN
Sbjct: 367 LDRELRDSYFLQVVARDNGSPPRNATANVRVTVTDDNDNDPRFTQESYHFSLVENLPTGT 426
Query: 64 EIGSLSTVNATIGVN 78
+G++ V+A IG N
Sbjct: 427 TVGTVFAVDADIGNN 441
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILEN 62
TA+ LD E ARY L QD + + + ++ + + + DINDNAP F S + EN
Sbjct: 683 TAKELDFELNARYRLIVQAQDNNARSQKSSTIYVNVNVIDINDNAPTFRSDPVMFGLQEN 742
Query: 63 AEIGS 67
+ S
Sbjct: 743 TAVNS 747
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE+ Y + A+ +D P+ + + +++ D ND+AP F ++ E
Sbjct: 1000 IRTAFRLDREEKDSYIVTAYARDGAYPSRFGFTSVVVSVLDTNDHAPVFKDAEYMMTVPE 1059
Query: 62 N-AEIGSLSTV---NATIGVN 78
N G + TV +A IG N
Sbjct: 1060 NQPNYGVIHTVVAYDADIGTN 1080
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE + Y L D + IT+ ++D NDN P F +I E+ +
Sbjct: 1111 QALDRETVPLYHLIVQAHDNTDAPRTSTTNITVAVSDENDNNPIFTDPSYQQTIQEDVSV 1170
Query: 66 GS 67
GS
Sbjct: 1171 GS 1172
>gi|300797441|ref|NP_001179277.1| protocadherin-8 precursor [Bos taurus]
Length = 1070
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 449 TAASLDRERISEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 508
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 509 PPGAYLATVAA 519
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQATYSLGLVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|444713183|gb|ELW54091.1| Protocadherin beta-16 [Tupaia chinensis]
Length = 521
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P IT+ ++D+NDNAP F + + E
Sbjct: 381 LETKRALDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 440
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S +A G N
Sbjct: 441 NNSPALHIGTISATDADAGTN 461
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ L D P + + + + D+NDNAPEF + +
Sbjct: 171 ELVLDKELDREEEPELKLTLTALDGGSPPRTGTTQVFIEVVDVNDNAPEFPHSLYKVQMP 230
Query: 61 ENAEIGSL-STVNAT 74
EN+ +GSL TV+A+
Sbjct: 231 ENSPVGSLVVTVSAS 245
>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Nomascus leucogenys]
Length = 2871
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 880 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 939
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 940 NSPIGLAVARVTAT 953
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 469 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 528
Query: 67 SL 68
L
Sbjct: 529 YL 530
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 569 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 628
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 629 DAAVGTSVVTVSA---VDRDAHS 648
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 248 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 307
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 308 NLEVGYEVLTVRATDG 323
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 356 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKXXXXQV 415
Query: 60 LENAEIG 66
E+ G
Sbjct: 416 REDVTPG 422
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 774 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 833
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 834 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 862
>gi|296481873|tpg|DAA23988.1| TPA: protocadherin 8 isoform 1 [Bos taurus]
Length = 1070
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 449 TAASLDRERISEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 508
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 509 PPGAYLATVAA 519
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQATYSLGLVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|114050895|ref|NP_059088.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 1 precursor
[Mus musculus]
gi|148670020|gb|EDL01967.1| cadherin EGF LAG seven-pass G-type receptor 2 [Mus musculus]
gi|225356528|gb|AAI56537.1| Cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [synthetic construct]
Length = 2919
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 873 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 932
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 933 NSPIGLAVARVTAT 946
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 462 LDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 521
Query: 67 SL 68
L
Sbjct: 522 YL 523
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 621
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 622 DAAVGTSVVTVSA---VDRDAHS 641
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 241 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 300
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 301 NLEVGYEVLTVRATDG 316
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD +++ L++ D NDNAP+F+ +
Sbjct: 349 IRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 409 REDVTPGA 416
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 767 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 826
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 827 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 855
>gi|71891737|dbj|BAA13407.2| KIAA0279 protein [Homo sapiens]
Length = 2854
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 804 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 863
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 864 NSPIGLAVARVTAT 877
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 393 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 452
Query: 67 SL 68
L
Sbjct: 453 YL 454
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 493 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 552
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 553 DAAVGTSVVTVSA---VDRDAHS 572
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 172 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 231
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 232 NLEVGYEVLTVRATDG 247
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 280 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 339
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 340 REDVTPGA 347
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 698 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 757
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 758 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 786
>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Saimiri boliviensis boliviensis]
Length = 2897
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 848 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 907
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 908 NSPIGLAVARVTAT 921
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 437 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 496
Query: 67 SL 68
L
Sbjct: 497 YL 498
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 537 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 596
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 597 DAAVGTSVVTVSA---VDRDAHS 616
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 216 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 275
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 276 NLEVGYEVLTVRATDG 291
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 324 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 383
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 384 REDVTPGA 391
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 742 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 801
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 802 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 830
>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
abelii]
Length = 2958
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 908 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 967
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 968 NSPIGLAVARVTAT 981
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 497 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 556
Query: 67 SL 68
L
Sbjct: 557 YL 558
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 597 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 656
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 657 DAAVGTSVVTVSA---VDRDAHS 676
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 276 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 335
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 336 NLEVGYEVLTVRATDG 351
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 384 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 443
Query: 60 LENAEIGS 67
E+ GS
Sbjct: 444 REDVTPGS 451
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 802 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 861
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 862 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 890
>gi|297281893|ref|XP_001088430.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Macaca mulatta]
Length = 402
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 80 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 139
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 140 NSPIGLAVARVTAT 153
>gi|114050897|ref|NP_001004177.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 precursor
[Mus musculus]
Length = 2917
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 873 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 932
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 933 NSPIGLAVARVTAT 946
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 462 LDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 521
Query: 67 SL 68
L
Sbjct: 522 YL 523
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 621
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 622 DAAVGTSVVTVSA---VDRDAHS 641
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 241 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 300
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 301 NLEVGYEVLTVRATDG 316
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD +++ L++ D NDNAP+F+ +
Sbjct: 349 IRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 409 REDVTPGA 416
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 767 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 826
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 827 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 855
>gi|292618185|ref|XP_002663585.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 807
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +++Y + D P ++IT+ ++D+NDNAP F + + +A + EN++ G
Sbjct: 406 LDRESVSQYNITITAADEGTPPLSSSTVITVHISDVNDNAPHFPAPVINAFLDENSQAGG 465
Query: 68 LST 70
L T
Sbjct: 466 LVT 468
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D +PA + + + DINDN P F+ + +
Sbjct: 186 ELVLQKPLDREKQSVIPLVLTSFDGGKPAKTGTLSVIVNVLDINDNWPVFSKPLYKGKVR 245
Query: 61 ENAEIGS 67
EN +G+
Sbjct: 246 ENVPVGT 252
>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
Length = 4457
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+I Y+L D P L+ +T+TD+NDN P F+ V +S + E +G
Sbjct: 3381 ALDREEIPHYSLTVQAADEGSPPLSSAVLVAVTVTDVNDNPPVFSQVNHSLLLQEGEAVG 3440
Query: 67 S 67
S
Sbjct: 3441 S 3441
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE+ Y + VQD P ++ + + + D+NDN+P+F ++ S I E+A
Sbjct: 2014 TGVPFDREEQDVYDIVVKVQDIRTPPRTAITKVKVFIDDVNDNSPQFLNLPFSMMISEDA 2073
Query: 64 EIGSL 68
E G +
Sbjct: 2074 EPGDV 2078
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE Y LN V D P I + + D+NDN P F +
Sbjct: 764 DLRLVCPLDRESKEFYILNITVYDLGIPQTSAWKFIAINVMDVNDNPPVFDQPRYVIHVP 823
Query: 61 ENAEIGSL 68
EN E+ S+
Sbjct: 824 ENKEVNSV 831
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSAS 58
EL LDRE R+ L +D+ + S + L L DINDN P F ++
Sbjct: 867 ELIVTGRLDRESSPRHDLLIEARDQATVGPQLFSTVNLVVILQDINDNPPRFVPKVHKIK 926
Query: 59 ILENAEIGSL 68
+ E+ +G+L
Sbjct: 927 VPEDVPVGTL 936
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ LDRE Y L+ + D + + + + D+NDNAPE + + AS+ E
Sbjct: 1082 IRMTEMLDRETAPHYWLSVYATDLGTEPLITWTHVFIEVLDVNDNAPELSQPMYFASVPE 1141
Query: 62 NAE-IGSLSTVNAT 74
N + + S+ V+AT
Sbjct: 1142 NVDTVESVIQVSAT 1155
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ T LDRE +++ V D PA + + + + D NDN P+F
Sbjct: 1186 ISTVSALDREDKPEHSIEVIVSDNGSPALSSTATVVIQVLDANDNPPKF 1234
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E + L D + +T+ +TD+NDN P+F S A++ E A
Sbjct: 2323 TKQVLDYESRKHFNLKIKATDNGTIPLSSETFVTINVTDVNDNPPDFDSSRYKATLDEMA 2382
Query: 64 EIGSL 68
+ G +
Sbjct: 2383 KCGHI 2387
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + N V+ D C + I L + D+NDN P F+S ++
Sbjct: 3063 ELFTLAVLDRERNVEF--NLVVKATDGGGRSCQADILLMVQDMNDNPPRFSSSHYEVTVF 3120
Query: 61 ENAEI 65
+N +
Sbjct: 3121 DNTTV 3125
>gi|73949397|ref|XP_849328.1| PREDICTED: protocadherin gamma-A3 [Canis lupus familiaris]
Length = 871
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + D P + I + + DINDN P F+ SA ILE
Sbjct: 404 LVTARSLDREQVSEYNITLRATDGGNPPLSTNTHIIVHVADINDNPPAFSQATYSAYILE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE---CVSLITLTLTDINDNAPEFASVINSA 57
EL R LDRE+ + L D P C+ +I L D NDN P F
Sbjct: 193 ELVLERALDREQKKIHQLVLIASDGGNPVLSGNLCIRVIVL---DANDNPPVFTQSEYQV 249
Query: 58 SILENAEIG-SLSTVNAT 74
S+ EN +G +L TVNAT
Sbjct: 250 SVQENLPVGTTLLTVNAT 267
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ R LD E Y + V+ +D P + I +T+ D+NDNAPE + S+
Sbjct: 300 DISILRSLDYEDAMFYEIK--VEAQDGPGLFSRAKILVTVLDVNDNAPEVTITSLTGSVP 357
Query: 61 ENAEIG 66
E A G
Sbjct: 358 EEATAG 363
>gi|307179933|gb|EFN68068.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 998
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDN--APEFASVINSASI 59
++T + LD E+ +TL +DR +P+ +++ + + D+N+N +P F + SAS+
Sbjct: 853 VRTTQSLDFEERQAHTLTIVARDRGEPSLSSETMLVIEVIDVNENLYSPVFDDFVVSASV 912
Query: 60 LENAEIGSLST------VNATIGVNRCGHTFRGKD 88
EN +G+L T + G ++ G++ RG D
Sbjct: 913 FENQPVGTLVTTVRAKDADPPGGDSKVGYSIRGGD 947
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ + Y LN V D +P ++ +T+ D+NDNAP+F + S I
Sbjct: 638 DLNTIGYLDRERESEYYLNISVFDLGKPQKSASKMLPVTILDVNDNAPKFEKSLASFRIS 697
Query: 61 ENA 63
E A
Sbjct: 698 ETA 700
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 8 LDRE-KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE + Y L DR P + + LTD+NDNAP F+ I + E A I
Sbjct: 168 LDRETALQGYNLTLRAMDRGVPQRYSYKFVPVHLTDMNDNAPVFSREIYEVKVPETAPI 226
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 8 LDREKIARYTLNAHV-----QDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LDRE+ Y L +D D P +L+ +T+ D+NDNAP FA + I E+
Sbjct: 748 LDRERQEIYELRIRARDNGGKDTDTPPLYSEALVRVTVDDVNDNAPTFALSTYNVKIRED 807
>gi|62510889|sp|Q5DRD7.1|PCDBC_PANTR RecName: Full=Protocadherin beta-12; Short=PCDH-beta-12; Flags:
Precursor
Length = 795
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 403 LETERPLDRESRAEYNITITVTDLGTPRLKTEHNITLLISDVNDNAPAFTQTSYTLFLCE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSISATDRDSGTN 483
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E++ + D P +L+ + + DINDN+PEF IL
Sbjct: 193 ELVLDKALDYEELPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIL 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSILGSLVVTVSA 266
>gi|296193005|ref|XP_002744326.1| PREDICTED: protocadherin gamma-A1 [Callithrix jacchus]
Length = 819
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTKRTLDRELISGYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 NAEIG----------SLSTVNATIGVNRCGHTFRGKDLRCY 92
N G S S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDSDSNENAQITYSLIEDTIQGAPLSSY 504
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D P I + + D NDN P F S+ EN +G+
Sbjct: 200 LDREEEAVHHLILTASDGGDPVRSGTLRICIQVVDANDNPPAFTQAEYRISVPENVRVGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLF 95
L VNAT G N ++F D R +F
Sbjct: 260 QLLIVNATDPDEGANGEVTYSFHNADHRVAQIF 292
>gi|432103917|gb|ELK30750.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Myotis davidii]
Length = 2668
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 654 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 713
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 714 NSPIGLAVARVTAT 727
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 243 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 302
Query: 67 SL 68
L
Sbjct: 303 YL 304
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 343 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 402
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 403 DAAVGTSVVTVSA---VDRDAHS 422
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 22 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 81
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 82 NLEVGYEVLTVRATDG 97
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F SI E
Sbjct: 548 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYE 607
Query: 62 NA----EIGSLSTVNATIGVN-RCGHTFR 85
+A + +S + G+N R +TF+
Sbjct: 608 DAPPFTSVLQISATDRDSGLNGRVFYTFQ 636
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+
Sbjct: 130 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATASVFLSVEDDNDNAPQFS 181
>gi|55151|emb|CAA29645.1| uvomorulin (711 AA) [Mus musculus]
Length = 711
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 43 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 102
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 103 GAVPGTSVMKVSAT 116
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 161 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNA 220
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 221 RIATLKVT 228
>gi|363727494|ref|XP_423746.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Gallus
gallus]
Length = 2864
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A Y+L A DR P + I +T+ DINDN P F + E
Sbjct: 775 IRTLRKLDRENVAVYSLRAFAVDRGSPPLKASVDIQVTVLDINDNPPVFEKDEFDIFVEE 834
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 835 NSPVGSI 841
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E I YTL QD +P ++++ + D+NDNAP F S A++LEN +
Sbjct: 352 ALDYETIREYTLRIKAQDGGRPPLINSSGMVSVQVVDVNDNAPIFVSTPFQATVLENVPL 411
Query: 66 G 66
G
Sbjct: 412 G 412
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + Y +D P + +++T+ D+NDN P F + + E
Sbjct: 464 ITVAAELDRETVENYHFGVEARDHGVPVMTSSASVSITVLDVNDNNPTFTEKVYHLRLNE 523
Query: 62 NAEIGS 67
+A +GS
Sbjct: 524 DAAVGS 529
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAW-ECVSLITLTLTDINDNAPEFASVINSASILEN 62
TAR LDRE + L D P + +T+T++D ND+ P F SI EN
Sbjct: 135 TARSLDRETKDTHVLKVTASDHGSPRRRSATTYLTVTVSDTNDHEPVFEQPEYRESIREN 194
Query: 63 AEIG-SLSTVNATIG 76
E+G + T+ AT G
Sbjct: 195 LEVGYEVLTIRATDG 209
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTL--NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE+++ Y L A+ Q +D +++ +T+ D NDN P+F+ +
Sbjct: 240 VRTRAPVDREEVSEYHLVVEANDQGKDPGPRSATAMVHITVEDENDNYPQFSEKRYLVQV 299
Query: 60 LENAEIGS 67
E+A + S
Sbjct: 300 QEDAPVNS 307
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E A YTL D P + + + + D NDNAP F S+ E
Sbjct: 669 ITTLMELDYEDQASYTLAITAHDNGIPQKSDTTYVEILILDANDNAPRFLRDRYQGSVFE 728
Query: 62 NAEIGS----LSTVNATIGVN-RCGHTFR 85
+ + + LS + G+N R +TF+
Sbjct: 729 DVPLSTSVLQLSATDRDSGLNGRLLYTFQ 757
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDREKI+ YTL D P + + + ++D+NDN P F+ S I
Sbjct: 3392 EIKVTKLLDREKISGYTLTVQASDNGNPPRRNTTTVNIDVSDVNDNPPVFSKGNYSIIIQ 3451
Query: 61 ENAEIG 66
EN IG
Sbjct: 3452 ENKPIG 3457
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ A Y L ++ D C + I LTL D+NDNAP F S ++
Sbjct: 3079 ELKTLMPLDREQQAVYYL--LMKATDGGGRFCQANIILTLEDVNDNAPVFTVDPYSITVF 3136
Query: 61 ENAEIGSLST----VNATIGVNRCGH 82
EN E +L T +A G+NR H
Sbjct: 3137 ENTEPKTLLTRVQATDADAGMNRKIH 3162
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1515 LYTTEKLDHETMNQHVLTVMVRDQDVPVKRNYARIIVNVSDTNDHAPWFTSSSYEGRVYE 1574
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1575 SAAVGS 1580
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +Y LN V D P L+ + + D NDN PEF + E
Sbjct: 775 LKILSPLDREVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSYFVEVSE 834
Query: 62 NAEIGS 67
N E+ S
Sbjct: 835 NKELNS 840
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ A + L V D PA V+ + + + D NDN P+F
Sbjct: 1200 TSRKLDREQQAEHILEVTVTDNGIPAKSTVARVIVKVLDENDNKPQF 1246
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LD EKI ++ L D ++IT+ +TD+NDN P F ++ A I E A
Sbjct: 2345 TTRTLDYEKIQQHKLLIRAIDGGMLPLSSDTVITVDVTDLNDNPPLFNQLVYEAKISELA 2404
Query: 64 EIGSLST 70
G T
Sbjct: 2405 PRGHFVT 2411
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +Y + DR ++ ++++ +T+TD+NDN P F + I ++
Sbjct: 2870 ITTLKELDHEMRDKYKITVIASDRGEKIQLSSLAVVEVTVTDVNDNPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGS----LSTVNA-TIGVNR-CGHTFRGKDL 89
E+ G LST +A T VNR + G DL
Sbjct: 2930 EDDPPGGIIAILSTTDADTEEVNRQVSYYITGGDL 2964
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D P S + +++ DINDN P F SAS+
Sbjct: 3182 IRLEKSLDRELQAVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEYREYSASVS 3241
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 3242 EDTVVGT 3248
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V + + +TDINDN P F+ +A I E+A
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDA 3349
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + D+ I + + D+NDNAP+ + ++E
Sbjct: 1092 IETADHLDRETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
DRE+ + + V + +P+ ++ +T+ D+NDNAP F ++ A++ ++E+G
Sbjct: 2040 FDREQQESFDVVIEVTEEHKPSVVAHIVVKVTVEDVNDNAPLFVNLPYYAAVKVDSEVG 2098
>gi|157841219|ref|NP_001103206.1| protocadherin gamma cluster 1 member precursor [Danio rerio]
gi|156229741|gb|AAI52489.1| Zgc:162322 protein [Danio rerio]
Length = 970
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDREK +Y + D P LIT+ + DINDN P F+ + S I E
Sbjct: 407 LVTDSQLDREKFPKYDIELKASDSGSPPLVSNKLITVNILDINDNPPAFSERVYSVYIKE 466
Query: 62 NAEIGS-LSTVNAT 74
N+ GS L++V A+
Sbjct: 467 NSAPGSILASVTAS 480
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LD E Y ++ +D+ P E + + + D+NDNAPE + +
Sbjct: 301 ELTISKSLDYEISTTYKIDIRARDKGGPVMEGHCRVQVNVLDVNDNAPEIIITSSPKPVR 360
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 361 ENAPIGTM 368
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDREK + L D PA + IT+ + D NDNAP F + ++
Sbjct: 193 EIVLQKALDREKQSILHLILTGIDGGDPARSGTTQITVRVLDANDNAPVFEQDLYEIKVM 252
Query: 61 ENAEIGSL 68
EN+ G++
Sbjct: 253 ENSAPGTI 260
>gi|22095545|sp|Q9QYP2.1|CELR2_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Multiple epidermal growth factor-like
domains protein 3; Short=Multiple EGF-like domains
protein 3
gi|6681360|dbj|BAA88687.1| MEGF3 [Rattus norvegicus]
Length = 2144
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 98 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 157
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 158 NSPIGLAVARVTAT 171
>gi|269914122|ref|NP_001013034.2| protocadherin beta-12 precursor [Pan troglodytes]
Length = 791
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 403 LETERPLDRESRAEYNITITVTDLGTPRLKTEHNITLLISDVNDNAPAFTQTSYTLFLCE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSISATDRDSGTN 483
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E++ + D P +L+ + + DINDN+PEF IL
Sbjct: 193 ELVLDKALDYEELPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIL 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSILGSLVVTVSA 266
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ RGLDRE++A+Y+++ QD P + + +T+ D+NDNAP F +++ +
Sbjct: 6965 LRPTRGLDRERVAQYSVSVLAQDGASPPRITTTSVVITVQDVNDNAPRFLHFLDAPA--- 7021
Query: 62 NAEIGSLST-VNATIGVNRC 80
+GS+S +N ++ V +
Sbjct: 7022 -GGLGSVSLRLNESVAVGQV 7040
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L AR LDRE+ + Y L+ V D + +T+ + D+NDNAP+ + + ++ E
Sbjct: 8807 LTVARALDRERQSVYALDVQVSDLGTSPLSTFARVTVYVQDVNDNAPQTQAALYQCTLTE 8866
Query: 62 NAEIGS----LSTVNATIGVN 78
NA +GS + +A GVN
Sbjct: 8867 NALVGSRCAVVQATDADTGVN 8887
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASV 53
+++ R LDRE A YTLN V D P W +LI LT+ D NDN P+F++V
Sbjct: 8147 KVRLTRTLDRETQAEYTLNVSVHDLGMPTRWAYATLI-LTVDDANDNGPKFSAV 8199
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L++ LD E R ++ V D PA +L+ +T+T +NDNAPEF + ++ E
Sbjct: 8041 LQSGAVLDFETTNRVAVSVTVTDAGVPALSSTALLFVTITPVNDNAPEFTRHVFDCTVTE 8100
Query: 62 NAEIGSLSTVNAT 74
N S ++++AT
Sbjct: 8101 NEVNASCASLSAT 8113
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVI-NSASI 59
+L+ A LD E I Y L + DR P +T+ +T++ND AP N ++
Sbjct: 5088 QLRVAGALDYENITEYDLELVLSDRGTPPQTRPVSMTVRVTNVNDEAPRLVGAYQNQTTV 5147
Query: 60 LENAEIGSLSTV 71
EN G ++TV
Sbjct: 5148 AENISSGVIATV 5159
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E A + L V D PA V + L + D+NDNAPE +S +A I E+A + +
Sbjct: 4991 LDFEVEAWHNLTVRVTDSGFPALSTVQPLVLQVRDVNDNAPELSSP-QTAQIAEDAALDT 5049
Query: 68 L 68
L
Sbjct: 5050 L 5050
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR----DQPAWECVSLITLTLTDINDNAPEFASVINSA 57
L A+GLDRE A +TL Q+ D S I + + DIND P F +
Sbjct: 7400 LLLAQGLDREATANHTLVVTAQNTVPSTDGKILSSTSTIQIEVLDINDRIPSFEASFYDV 7459
Query: 58 SILENAEIG 66
++ EN IG
Sbjct: 7460 AVPENEAIG 7468
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T +DRE A TL+A V D + +TL + D NDNAP F + S + E+A
Sbjct: 8387 TGTRIDREIDA--TLDAIVNVSDGFGLHTIVPVTLRVVDRNDNAPVFDDIAYSCQLQEDA 8444
Query: 64 EIGSLST 70
++G+L T
Sbjct: 8445 DVGALCT 8451
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LD E A TL D QP + + + + D+NDNAP FAS + E
Sbjct: 8595 LTLQRLLDFETEAFLTLTLVATDHGQPRLSGRASVAVNVIDVNDNAPVFASPNPVCVLSE 8654
Query: 62 NAEIGS 67
+A +G+
Sbjct: 8655 SAALGT 8660
>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]
Length = 3475
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TAR LDREKI + L D P +L+ +TL+DINDN P F + S+L
Sbjct: 1817 QIETARLLDREKIPVHKLIVGAIDTGVPPQTGTTLVQITLSDINDNGPTFEANDTIGSVL 1876
Query: 61 EN 62
EN
Sbjct: 1877 EN 1878
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN +D + + ++L+T+TLTDINDNAP F + +A I EN+ S
Sbjct: 1507 LDYDLVQLYQLNISAEDLGYKSKKSIALVTITLTDINDNAPYFNQSLYNAYIAENSPASS 1566
Query: 68 L 68
Sbjct: 1567 F 1567
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE++A YTL D+ P + + + + D NDN P+F + S ++
Sbjct: 1078 EIYTTVRLDREEMAFYTLTVDAVDQGVPQLTGSAAVLVNVLDKNDNPPKFTRLF-SVNVT 1136
Query: 61 ENAEIGS----LSTVNATIGVN 78
ENAEIG +++ ++ +G+N
Sbjct: 1137 ENAEIGQFVIKITSSDSDVGIN 1158
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE A Y L +DR P+ S I + + D NDN+P F SA+I E
Sbjct: 414 LRVSGSLDREIKAAYDLQVVAKDRGDPSKSTQSRIRINVLDENDNSPIFDPKQYSAAIAE 473
Query: 62 NAEIGS 67
NA IG+
Sbjct: 474 NASIGA 479
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD P+ + + D+NDNAP F + S I ENA
Sbjct: 174 TAR-LDYEEVQHYILVVQAQDNGFPSLSSTLTVYCNVIDLNDNAPIFDPMSYSNEIFENA 232
Query: 64 EIGS-LSTVNAT 74
I S + TV+AT
Sbjct: 233 PINSPVVTVSAT 244
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDRE Y L D P + + + D ND++PEF A +
Sbjct: 654 EISLLRALDRELQEEYILTLVAMDTGSPPLTGTGTVRVVVQDTNDHSPEFERQSYYAVVP 713
Query: 61 ENAEIGS 67
EN IG+
Sbjct: 714 ENQPIGT 720
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E+ +Y + D D+P+ V + + +TD NDNAP + A ++E
Sbjct: 981 GLDYERNQQYEVWIEAADSDRPSLRSVLQLIVNVTDANDNAPVMDQQVYVAEVMEEESPS 1040
Query: 67 SL-STVNAT 74
L + V+AT
Sbjct: 1041 QLIAKVSAT 1049
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 16 YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
YTLN DR P + +T+ +T +N+ AP F S + EN +GS
Sbjct: 1410 YTLNVRAVDRGVPPQQDEVTVTIIVTGVNNFAPVFQSPSYQVIVPENEPVGS 1461
>gi|281345411|gb|EFB20995.1| hypothetical protein PANDA_000352 [Ailuropoda melanoleuca]
Length = 1951
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDREKI+ Y + D P+ + ITL + DINDN P F V SA I E
Sbjct: 404 LVTWKYLDREKISMYNITVMASDLGTPSLSTETHITLYVADINDNPPTFPQVSYSAYIPE 463
Query: 62 NAEIG-SLSTVNA 73
N G S+ TV A
Sbjct: 464 NNPRGASIFTVMA 476
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE+ Y + DR + + ITL +TD+NDNAP F + EN A
Sbjct: 1078 LDREQTPEYNVTITATDRGKSPLSSSTTITLHITDVNDNAPVFHQASYVVHVAENNPPGA 1137
Query: 64 EIGSLSTVNATIGVN-RCGHTFRGKDLR 90
I +S + +G N R ++ DL
Sbjct: 1138 SIAQVSASDPDLGPNGRVSYSIVASDLE 1165
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P I +T+ D NDNAP FA I +
Sbjct: 1573 ELVLEQALDREEEAAHHLVLIAWDGGDPRRSSTVHIHVTVLDTNDNAPVFALPIYRVKVP 1632
Query: 61 ENAEIGS 67
EN +G+
Sbjct: 1633 ENVSLGT 1639
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D P + + + +TD NDNAP F+ + S+
Sbjct: 865 ELALEKRLDREQQSYHRLILTALDGGDPPLSGTTELRIQVTDANDNAPVFSQDVYRVSLR 924
Query: 61 ENAEIGS 67
EN G+
Sbjct: 925 ENVPPGT 931
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P I +T+ D NDNAP FA I +
Sbjct: 193 ELVLEQALDREEEAAHHLVLIAWDGGDPRRSSTVHIHVTVLDTNDNAPVFALPIYRVKVP 252
Query: 61 ENAEIGS 67
EN G+
Sbjct: 253 ENVSPGT 259
>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
Length = 3570
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDL 89
++ + +G+N R + +D+
Sbjct: 1025 SVIQVAASDPDVGLNGRIKYLLSDRDM 1051
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P S + + + D NDN+P F SAS+
Sbjct: 2229 QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLVRILDENDNSPVFDPKQYSASVA 2288
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2289 ENASIGAM 2296
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1111 LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1170
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1171 FVGKLTAVDRDIGRN 1185
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2767 GLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYTAEVLE 2821
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2864 EIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2922
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2923 ENAEIGSF 2930
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1982 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 2040
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 2041 PIATEVVTVSA 2051
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 452 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFSM 544
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1550 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1607
Query: 59 IL 60
IL
Sbjct: 1608 IL 1609
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN VQD V+++T+ LTD+NDN P F I EN +G+
Sbjct: 3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGT 3351
Query: 68 L 68
Sbjct: 3352 F 3352
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ + Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2546 EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 2604
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2605 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 2645
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2968 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 3024
Query: 62 NAEIGSLSTVNATIGVNR 79
+ S++ V I +R
Sbjct: 3025 LQQ--SIALVGQIIATDR 3040
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2335 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2393
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2394 MENTVPPNGGYVLTVNA 2410
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDREK+++Y + +D+ P + + + L + D+NDN P+F
Sbjct: 658 QLTTRRPLDREKMSQYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2447 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPS 2506
Query: 66 GS 67
G+
Sbjct: 2507 GT 2508
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+ + Y L D P + + + L D+NDN P F + I
Sbjct: 3602 EISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYIS 3661
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3662 ENEPAGT 3668
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1883 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1939
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1940 QVGQIVARDADLGQN 1954
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS 67
A G+
Sbjct: 282 TALPGT 287
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L AR LDRE + L +D P S IT+ + D NDNAPEF + S
Sbjct: 1334 QLSLARRLDRESQEIHHLIVVAKDAALKHPLSTNAS-ITIVVLDENDNAPEFTQSSSEVS 1392
Query: 59 ILENAEIGS 67
+LE + G+
Sbjct: 1393 VLETSPTGT 1401
>gi|350581211|ref|XP_003124069.3| PREDICTED: protocadherin gamma-A3 [Sus scrofa]
Length = 828
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + D +P + ITL + DINDN P F SA I E
Sbjct: 404 LVTARSLDREQVSEYNVTLRATDGGRPPLSTDTHITLHVADINDNPPTFPHASYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREEKTVHQLVLTASDGGDPVRSSTLCIQVIVLDANDNPPVFTQPEYQVSVQ 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENLPVGTRLLTVNAT 267
>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
Length = 3582
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A
Sbjct: 961 TNAALDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILEDA 1020
Query: 64 EIGS----LSTVNATIGVN 78
+G+ ++ + +G+N
Sbjct: 1021 LVGTSVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|10047319|dbj|BAB13447.1| KIAA1621 protein [Homo sapiens]
Length = 787
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 414 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 473
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G+N
Sbjct: 474 NNSPALHIGSVSATDRDSGIN 494
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 204 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 263
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 264 ENSPLGSLVATVSA 277
>gi|410948467|ref|XP_003980960.1| PREDICTED: protocadherin beta-2 [Felis catus]
Length = 784
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A L D P +L+ + + DINDNAPEFA ++ +L
Sbjct: 194 QLVLDKALDREEQAEIRLTLTALDGGTPPRSGTALVRIEVLDINDNAPEFAKLLYEVQVL 253
Query: 61 ENAEIG 66
EN+ IG
Sbjct: 254 ENSPIG 259
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 404 LLTNTPLDRETKSEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 464 NNSPALHIGSVSATDRDSGAN 484
>gi|297295322|ref|XP_001088899.2| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 1721
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 1301 KLVTDGALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 1360
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 1361 ENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLESRTL 1399
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D P L + DINDN P F+ V I E
Sbjct: 408 LVTHRALDREQVSSYNITVTATDGGSPPLSTEIHFMLQVADINDNPPTFSHVSYFTYIPE 467
Query: 62 N----AEIGSLSTV------NATIGVNRCGHTFRGKDLRCY 92
N A I S++ + NA I + T +G L Y
Sbjct: 468 NNARGASIFSVTALDPDSKENARIIYSLAEDTIQGAPLSSY 508
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+ A + L D P L+++T+ D NDNAP F S+
Sbjct: 197 ELVLEHALDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDTNDNAPVFTLPEYRVSVP 256
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 257 ENLPVGTQLLTVTAT 271
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E+ Y + +Q D A+ + + +T+ D+NDN+PE A + +
Sbjct: 304 EIKISENLDYEETGFYEI--EIQAEDGGAYLATAKVLITVEDVNDNSPEVAITSLFSPVT 361
Query: 61 ENAEIGSL 68
E++ +G++
Sbjct: 362 EDSPLGTV 369
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C +I + D NDN+PE I+E++
Sbjct: 1201 TQQPLDFEEVERYTMNIEAKDRGSLSTRCKVII--EVLDENDNSPEIIITSLPDQIMEDS 1258
Query: 64 EIG 66
G
Sbjct: 1259 PPG 1261
>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
Length = 4557
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK+ LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3085 ELKSLAPLDREKIPAYNLVARATDGG--GRFCQSEIHLILEDVNDNPPVFSSDHYTACVY 3142
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +GVNR
Sbjct: 3143 ENTATKALLTRVQATDPDVGVNR 3165
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L +D PA V+ + + +TD+NDNAP F+ + SA I E+A +G
Sbjct: 3299 ALDFESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPTFSQAVYSAVISEDAAVG 3358
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+I+ Y+L +D P + + ++D+NDN+P F +A I E
Sbjct: 3399 VKVKKKLDRERISGYSLVVQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQE 3458
Query: 62 NAEIGS 67
N +G+
Sbjct: 3459 NKPVGT 3464
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 1519 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTSPLYEASVFE 1578
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1579 SAAVGS 1584
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK Y LN + D P L+T+T+ D NDN P F S +ILE+ +G+
Sbjct: 790 LDREKTELYLLNITIYDLGNPQKSSWRLLTVTVEDANDNKPVFLQDSYSVNILESTSLGT 849
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IAR+ + HV+D P S +T+ +TD+NDN P F+ + +
Sbjct: 1834 IRTIANLDHETIARFHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVFETVL 1893
Query: 60 LENAEIG 66
L IG
Sbjct: 1894 LLPTYIG 1900
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E I + +L D P L+++++TD+NDN P F +I + + E A
Sbjct: 2349 TARMLDHELIQQCSLKVRATDNGFPPMSSEVLVSISITDMNDNPPVFNQLIYESYVSELA 2408
Query: 64 EIGSLST 70
G T
Sbjct: 2409 PRGHFVT 2415
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK + +T D + + +L+++T+TDINDNAP F + S+
Sbjct: 2876 ISTLKDLDHEKDSAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVFEHEVYRGSVK 2935
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2936 ESDPPGEVVAVLST 2949
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A YTL +DR + + S++ L L D+ND +P F + +LE+
Sbjct: 890 ADQLDREAKANYTLKIEARDRAESGHQQFSVVPLKVFLDDVNDCSPAFIPSSYNVKVLED 949
Query: 63 AEIGSL 68
+G++
Sbjct: 950 LPVGTV 955
>gi|168278929|dbj|BAG11344.1| protocadherin beta 16 precursor [synthetic construct]
Length = 776
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G+N
Sbjct: 463 NNSPALHIGSVSATDRDSGIN 483
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|57529027|ref|NP_001009589.1| protocadherin 2 alpha b 10 precursor [Danio rerio]
gi|53748797|dbj|BAD52314.1| cadherin-related neuronal receptor variable 10 [Danio rerio]
gi|53748820|dbj|BAD52327.1| cadherin-related neuronal receptor variable 10 [Danio rerio]
gi|190337878|gb|AAI62233.1| Protocadherin 2 alpha b 10 [Danio rerio]
gi|190339334|gb|AAI62545.1| Protocadherin 2 alpha b 10 [Danio rerio]
Length = 940
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 411 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 470
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 471 VLHTVSAVDPDVGDN 485
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +P IT+ + D+NDN P F+ + A
Sbjct: 191 ELVLQKALDREKQPLIRLTLTA--VDGGKPLRSGTMQITVNVEDVNDNIPVFSKSLYKAR 248
Query: 59 ILENAEIGS-LSTVNAT 74
+ ENA G+ + TV A+
Sbjct: 249 VNENAPPGTPIITVQAS 265
>gi|344238297|gb|EGV94400.1| Protocadherin beta-6 [Cricetulus griseus]
Length = 2168
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE++A +TL D P +L+ + + DINDN+PEF +
Sbjct: 974 ELVLDQTLDREELAEFTLTLTALDGGSPPRSGTALVRILVLDINDNSPEFVQSLYKVQSY 1033
Query: 61 ENAEIGSL 68
EN +GSL
Sbjct: 1034 ENTPVGSL 1041
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-EFASVINSASI 59
+L R LD E + + D+ PA +L+ + + D NDNAP + N+ I
Sbjct: 1293 QLFALRALDYEALQTFEFRVGATDQGSPALSSQALVRVLVLDANDNAPFVLYPLQNAVQI 1352
Query: 60 LENAEIGSL-STVNAT---IGVN 78
E++ IGSL +TV+AT IGVN
Sbjct: 1353 PEDSPIGSLITTVSATDKDIGVN 1375
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE A Y + V D P +T+ ++D+NDNAP F + + E
Sbjct: 1504 LLTQKPLDRETTAEYNITITVVDMGSPMLRTQVNVTVEVSDVNDNAPAFTQTSYTLFVQE 1563
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 1564 NNSPALHIGTISATDSDSGSN 1584
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE A Y + V D P IT+ ++D+NDNAP F + + E
Sbjct: 388 LETDGALDRESRAEYNITITVNDLGTPRLTTQHTITVQVSDVNDNAPAFTQTSYTLFVQE 447
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 448 NNSPALHIGTISATDSDSGSN 468
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P IT+ ++D+NDN+P F + + E
Sbjct: 1780 LMTEGALDRESRAEYNITISVTDLGTPRLTTQHTITVQVSDVNDNSPAFTQTSYTLFVQE 1839
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 1840 NNSPALHIGTISATDSDSGSN 1860
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E+ A+ L D P + I + + DINDN PEF+ + +
Sbjct: 179 ELVLDKALDHEEQAQLRLTLTALDGGSPPRSGTTEIQILVLDINDNTPEFSQELYEVQVP 238
Query: 61 ENAEIGSL 68
EN +G+L
Sbjct: 239 ENNPVGTL 246
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE Y + V D P IT+ ++D+NDNAP F + + E
Sbjct: 1184 LVTEMPLDRESHTEYNITITVTDLGTPRLTTQHTITVQVSDVNDNAPAFTQTSYTLFVQE 1243
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 1244 NNSPALHIGTISATDSDSGSN 1264
>gi|334329182|ref|XP_003341195.1| PREDICTED: protocadherin-16 [Monodelphis domestica]
Length = 3184
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + L +D QP L+T+T+ D ND+AP F + + + E
Sbjct: 1685 LGTARSLDRETEPSFQLLVVARDGGQPVRSATVLVTVTVLDANDHAPTFTAPSYAVEVPE 1744
Query: 62 NAEIGSL 68
+A IG+L
Sbjct: 1745 DAPIGTL 1751
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A +TL D P L+T+++ DIND AP F + E
Sbjct: 1479 LSVTRPLDREQRAEHTLTVVASDHGSPPRSATQLLTVSVVDINDEAPTFPQAAYHVRVSE 1538
Query: 62 NAEIG----SLSTVNATIGVN 78
N G +L + +GVN
Sbjct: 1539 NRPPGTTVLTLRATDPDLGVN 1559
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA--- 57
E+ T R LDRE+ + Y L VQD P + + + D+NDN+P F + +A
Sbjct: 1041 EVTTRRSLDREQQSSYQLLVQVQDGGVPPRSTTGTVHIMVLDLNDNSPTFLHTLGAAGGG 1100
Query: 58 ---SILENAEIGSLST 70
+LE G+L T
Sbjct: 1101 LPVQVLEGIAPGTLVT 1116
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + YTL D P +L+ +TL DIND+AP F A +
Sbjct: 209 ELVVSGDLDRENRSHYTLRLEAYDGGAPPRRAQALLDVTLVDINDHAPAFNQSRYRAVVS 268
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 269 ESLAPGS 275
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y L DR P L+ +T+ D+NDN P FA ++ E+ +G+
Sbjct: 2436 LDFESVTEYNLTVCAADRGTPPRSTTVLVVITVQDVNDNPPVFAQPHYRVAVPEDTPVGT 2495
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFAS 52
EL+TA LDRE+ ARY H D P VS +T+T+ D+ND+AP F +
Sbjct: 1788 ELRTAVPLDREREARYGFVVHAVDGAAAGPLSASVS-VTVTVRDVNDHAPAFPA 1840
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ AR LDRE A++ L D + V +T+ + D+N++ P F + SAS+ E
Sbjct: 2535 LRLARQLDREAQAQHQLVVKAADPPGAHFALVP-VTVEVQDVNEHGPAFPLLTLSASLPE 2593
Query: 62 NAEIGSLST 70
N G+L T
Sbjct: 2594 NQPPGTLVT 2602
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ L + QD P + +T+ D ND+AP F S S + E
Sbjct: 1581 LTTRQVLDREEQQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHAPAFGSSHLSLEVPE 1640
Query: 62 NAEIGSLSTVNAT 74
+ +L+ + A+
Sbjct: 1641 GQDPQTLTVLRAS 1653
>gi|260809723|ref|XP_002599654.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
gi|229284935|gb|EEN55666.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
Length = 417
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE +Y L+ VQD P+ + +T+ + D+NDN P F+S + S+
Sbjct: 220 EVSVVSNLDRETTGQYILDVFVQDGGSPSLNATATVTVNVLDVNDNFPVFSSDPYTVSVY 279
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 280 EDIAVGA 286
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K LDRE Y L D S + +T+ D NDN P F+ + SA++ E
Sbjct: 8 IKLTANLDRENTDFYNLTVQATDMATSPLSNSSYVEVTVIDSNDNYPTFSPTVYSATVPE 67
Query: 62 NAEIGS----LSTVNATIGVN 78
+ I S ++ +A IG N
Sbjct: 68 DQAISSTVVTVAVTDADIGTN 88
>gi|113951653|ref|NP_001039292.1| protocadherin-1 precursor [Gallus gallus]
gi|50346359|gb|AAT74929.1| protocadherin [Gallus gallus]
Length = 1049
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F + A + EN+ +G
Sbjct: 230 LDREQWDSYDLTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALYEAELSENSPVG 288
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ RY D+ P+ + + + + + D NDN P+F + S++
Sbjct: 555 EIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVM 614
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 615 ENMPPLSPVGMVTVIDADKGEN 636
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + YT+ D P + + + + D+NDNAP F+ + E
Sbjct: 450 LQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPE 509
Query: 62 NAEIGSL 68
N E L
Sbjct: 510 NNEPNDL 516
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 38 LTLTDINDNAPEFASVINSASILENAEIGSLSTV 71
+ + DINDN P FAS + + +I EN IG+L ++
Sbjct: 148 IEVLDINDNTPNFASPVLTLTIPENTNIGTLFSI 181
>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
[Canis lupus familiaris]
Length = 2926
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 876 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 935
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 936 NSPIGLAVARVTAT 949
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 465 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 524
Query: 67 SL 68
L
Sbjct: 525 YL 526
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D P + +++T+ D+NDN P F + + E
Sbjct: 565 ISVAAELDREEVDFYSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQPEYTVRLNE 624
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 625 DAAVGTSVVTVSA---VDRDAHS 644
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 244 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 303
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 304 NLEVGYEVLTVRATDG 319
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 352 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 411
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 412 REDVTPGA 419
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 770 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 829
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 830 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 858
>gi|348583041|ref|XP_003477283.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15-like [Cavia
porcellus]
Length = 794
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A+Y + V D P + IT+ ++D+NDNAP F + S+ E
Sbjct: 400 LVTEGALDRETTAQYNITITVTDLGTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVPE 459
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S ++ G N
Sbjct: 460 NNSPALHIGSVSATDSDSGTN 480
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D P + I + + D+NDNAP FA + +
Sbjct: 191 ELVLDKELDREEQSEFRLTLTALDGGSPPRSGTAKIRVLVMDVNDNAPAFAQTLYEVQVP 250
Query: 61 ENAEIGSL----STVNATIGVN 78
EN +G+L S + IG N
Sbjct: 251 ENTPLGTLIVKVSARDLDIGTN 272
>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Loxodonta africana]
Length = 2928
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+YTL A+ D+ P + +T+ D+NDN P F + E
Sbjct: 874 VRTLRRLDRENVAQYTLRAYAVDKGMPPARTPMEVMVTVLDVNDNPPVFEQDEFDVFVEE 933
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 934 NSPIGLAVARVTAT 947
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 463 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQILDINDNAPIFVSTPFQATVLESVPLG 522
Query: 67 SL 68
L
Sbjct: 523 YL 524
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 563 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 622
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 623 DAAVGTSVVTVSA---VDRDAHS 642
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + VQD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 242 VTTAEELDRETKSTHVFRVTVQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 301
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 302 NLEVGYEVLTVRATDG 317
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 350 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 409
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 410 REDVAPGA 417
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 768 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 827
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 828 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 856
>gi|307194559|gb|EFN76851.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 1801
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE++ Y+LN +DR QP L+ +T+ D+NDN P F S+ E
Sbjct: 222 LETTGKLDREQVEYYSLNICARDRGQPPRLGYLLVNVTVLDVNDNPPVFQQSDYVVSLNE 281
Query: 62 NAEIGS 67
+A IG+
Sbjct: 282 SAPIGT 287
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L D+ P+ + + + + D+ND+ P F SA + E + IG
Sbjct: 457 LDREEIPKYNLTIVATDKGTPSRSTTAYLVIHVNDVNDHEPVFQRSEYSAVLSELSPIGS 516
Query: 67 ---SLSTVNATIGVNRCGH 82
S+S +A GVN H
Sbjct: 517 FVASISATDADSGVNAKIH 535
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ Y L D+ QP V + + + D NDNAPEF + S +
Sbjct: 1084 KLYVKQELDREQQDYYALEVTASDQGQPPRSSVVPMVVHIIDENDNAPEFINSSFSFHLR 1143
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN +G L + +G N
Sbjct: 1144 ENEPPDTFVGKLLATDRDVGRN 1165
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+L T LDRE IA Y + +D+ P + + LT+ D+NDN+P F
Sbjct: 663 QLTTKTDLDRETIAEYRILVIARDQGIPVQSSTATVVLTVDDVNDNSPIF 712
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
+ LD E++ RYTLN D P V+ + + + D NDN P F
Sbjct: 1409 KPLDYEELMRYTLNVTCSDGGHPRLSSVTSLIVEVIDANDNPPVFP 1454
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL- 60
+ TA LDRE+ A Y L H+ R A+ +++ +T+ D+NDN P FA I
Sbjct: 878 ISTAGCLDREQEAFYRL--HLSARSNLAY-GQTVVNITVEDVNDNPPRFAKGEQEDEIFL 934
Query: 61 -ENAEIG 66
ENA +G
Sbjct: 935 NENAAVG 941
>gi|426350348|ref|XP_004042739.1| PREDICTED: protocadherin gamma-A4 [Gorilla gorilla gorilla]
Length = 820
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + D+NDN P F SA + E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDVNDNPPTFPHASYSAYVPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Equus caballus]
Length = 3016
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 967 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 1026
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 1027 NSPIGLAVARVTAT 1040
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 556 LDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 615
Query: 67 SL 68
L
Sbjct: 616 YL 617
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +T+T+ D+NDN P F + + E
Sbjct: 656 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVTVTILDVNDNNPTFTQPEYTVRLNE 715
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 716 DAAVGTSVVTVSA---VDRDAHS 735
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 335 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 394
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 395 NLEVGYEVLTVRATDG 410
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+
Sbjct: 443 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFS 494
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F SI E
Sbjct: 861 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYE 920
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 921 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 949
>gi|311250359|ref|XP_003124075.1| PREDICTED: protocadherin gamma-A7-like [Sus scrofa]
Length = 882
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE++A + L D P + + +T+ D+ND+AP F+S ++
Sbjct: 193 ELVLERALDREEVAAHHLLLTASDGGDPPRSGTARVQVTVVDVNDHAPIFSSPQYQVTVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L TVNA GVN ++FR K + +F+
Sbjct: 253 ENVPVGTRLLTVNAVDLDEGVNGEVTYSFRKKTPKILQIFQ 293
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T GLD E + Y + VQ +D P + + +T+ D+ND+APE S+SI
Sbjct: 300 ELSTLDGLDYEDSSYYEM--EVQAQDGPGSMTRAKVLVTILDVNDHAPEVTLTSVSSSIP 357
Query: 61 ENAEIGSL 68
E+ G++
Sbjct: 358 EDTPPGTV 365
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA+ LDRE + Y + D P + +++ + D NDN P F S + E
Sbjct: 404 LMTAKNLDRENFSVYNITLKATDGGSPPLSTETHVSIHVADTNDNPPTFLHSSYSVYVPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGT 469
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog), 5
prime [Microtus ochrogaster]
Length = 3301
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1014 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTIQDVNDNAPVFPAEEFEVRVKE 1073
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1074 NSIVGSV 1080
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 380 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 439
Query: 62 NAEIG 66
N E G
Sbjct: 440 NVEEG 444
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 709 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 768
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 769 -SVVSVT 774
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 596 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 655
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 656 LENAPLGHSVIHIQAVDADHGEN 678
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1034 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1093
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1094 NSIVGSV 1100
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 729 LDRESVEHYFFGVEARDHGIPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVG- 787
Query: 68 LSTVNATIGVNR 79
+TV + V+R
Sbjct: 788 -TTVVSVTAVDR 798
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 616 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 675
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 676 LENAPLGHSVIHIQAVDADHGEN 698
>gi|296481874|tpg|DAA23989.1| TPA: protocadherin 8 isoform 2 [Bos taurus]
Length = 972
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I+ Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 449 TAASLDRERISEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 508
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 509 PPGAYLATVAA 519
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQATYSLGLVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|148678210|gb|EDL10157.1| protocadherin beta 14 [Mus musculus]
Length = 808
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 205 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 264
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 265 ENSPVGSL 272
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 415 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 474
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 475 NNSPALHIGTISATDSDSGSN 495
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 312 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 369
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 370 EN----SPETIVAIFGIS 383
>gi|190338340|gb|AAI63290.1| Protocadherin 2 alpha b 6 [Danio rerio]
Length = 939
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +P I + + D+NDN P F + A
Sbjct: 190 ELVLQKALDREKQPVIRLTLTA--VDGGKPPRSGTVHIIVNVIDVNDNIPVFTKSLYKAR 247
Query: 59 ILENAEIG-SLSTVNA 73
ILENA + S+ TVNA
Sbjct: 248 ILENAPVEFSVITVNA 263
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
TAR LDRE ARY L QDR P + + IT+ + D NDN P+F A+I E+
Sbjct: 1268 TARPLDREVHARYVLQITAQDRGSPVSHQGHCNITIRVEDENDNDPKFELQKYIATIDED 1327
Query: 63 AEIG----SLSTVNATIGVN 78
A+IG ++ ++A +G+N
Sbjct: 1328 AQIGTTVLTVKAIDADVGIN 1347
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE RY + V D P + + +T+ D NDN+P FA + I EN A
Sbjct: 488 LDREVKERYNITVIVSDNGVPTLTATAHVIVTILDANDNSPIFAKSLYEFEIEENMRRGA 547
Query: 64 EIGSLSTVNATIGVN 78
IG++S ++ G+N
Sbjct: 548 MIGTVSASDSDAGIN 562
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E + LN D PA+ + + + D+NDN PEF S S+ E
Sbjct: 251 IRVANALDHETKPQVLLNIQATSGDPPAYGHTQ-VNIDIEDVNDNPPEFESNTVRISVPE 309
Query: 62 NAEIGS 67
N EIGS
Sbjct: 310 NVEIGS 315
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L AR LD E + R+TL D P+ I + + D+NDNAP F + S++E
Sbjct: 361 LTLARPLDYESMQRHTLVVTASDSGTPSLSTNLTILVEVQDVNDNAPIFEKNEYAISVIE 420
Query: 62 ----NAEIGSLSTVNATIGVN-RCGHTFRGKD 88
N++I +S +A G N R + G+D
Sbjct: 421 STPSNSQILQVSATDADTGNNARLTYKILGED 452
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
++T LD E+ Y L D +P + V L+ + + D+NDN P F S
Sbjct: 694 IRTKTSLDHEEKTIYRLAVAATDNGKPPKQTVRLLRIEVLDLNDNRPTFTS 744
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVI-NSASI 59
E+ T LDRE A Y L +D+ P + + + D+NDNAP+ + S+
Sbjct: 584 EITTRDSLDRETKASYDLVVEARDQGTPYRSSRVSVKVQILDVNDNAPDIVDPQEDVVSV 643
Query: 60 LENAEIGS 67
E IG+
Sbjct: 644 REEQPIGT 651
>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Ovis aries]
Length = 2841
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 866 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEE 925
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 926 NSPIGLAVARVTAT 939
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 455 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 514
Query: 67 SL 68
L
Sbjct: 515 YL 516
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 555 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 614
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 615 DAAVGTSVVTVSA---VDRDAHS 634
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 238 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 297
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 298 NLEVGYEVLTVRATDG 313
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 760 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 819
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFRG 86
+ + +S + G+N R +TF+G
Sbjct: 820 DVPPFTSVLQISATDRDSGLNGRVFYTFQG 849
>gi|26325230|dbj|BAC26369.1| unnamed protein product [Mus musculus]
Length = 784
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTSYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVIGILDVNDNPPVFS 1243
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGKLVVTLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCTVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLVGGNQLGH 3368
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVIGILDVNDNPPVFS 1243
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGKLVVTLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCTVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLVGGNQLGH 3368
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 997 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1056
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1057 NSIVGSV 1063
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 363 IRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 422
Query: 62 NAEIG 66
N E G
Sbjct: 423 NVEEG 427
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 692 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDATVGT 751
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 752 -SVVSVT 757
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 579 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 638
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 639 LENAPLGHSVIHIQAVDADHGEN 661
>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Felis catus]
Length = 2931
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 880 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 939
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 940 NSPIGLAVARVTAT 953
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 469 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 528
Query: 67 SL 68
L
Sbjct: 529 YL 530
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D P + +++T+ D+NDN P F + + E
Sbjct: 569 ISVAAELDREEVDFYSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQPEYTVRLNE 628
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 629 DAAVGTSVVTVSA---VDRDAHS 648
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 248 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 307
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 308 NLEVGYEVLTVRATDG 323
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 356 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 415
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 416 REDVTPGA 423
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 774 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 833
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 834 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 862
>gi|395508265|ref|XP_003758433.1| PREDICTED: cadherin-5 [Sarcophilus harrisii]
Length = 679
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 8 LDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDREK + Y L A++ D+D E S T+ + D+NDNAPEFA + + S+ E + +G
Sbjct: 108 LDREKKSEYYLTAYIVDKDTNENLEPPSNFTIKVHDVNDNAPEFAQRVFNGSVPEMSAVG 167
Query: 67 SLSTVNATIGVNRCGHTFRGKDLRCYNLFK 96
++V V+ T G YN+ +
Sbjct: 168 --TSVTRVTAVDADDPTVLGHASVSYNIIR 195
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD-----QPAWECVSLITLTLTDINDNAPEFASVINS 56
+ + LDRE Y L ++ D E + + + + D NDNAPE A N
Sbjct: 316 ISNVKELDREIYPWYNLTVEAKEMDTRGNYPTGQESIVQVHVEILDENDNAPEIAQP-ND 374
Query: 57 ASILENAEIGSLST 70
A + ENA G+L T
Sbjct: 375 ARVCENAAPGTLVT 388
>gi|355709597|gb|AES03644.1| protocadherin gamma subfamily B, 7 [Mustela putorius furo]
Length = 236
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P + ITL +TD+NDNAP F +
Sbjct: 61 KLVTDGALDREQTPEYNVTITATDRGKPPLSSSTTITLHITDVNDNAPVFHQASYVVHVA 120
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + +G N R ++ DL
Sbjct: 121 ENNPPGASIAQVSASDPDLGPNGRVSYSIIASDL 154
>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
Length = 2919
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 870 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEE 929
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 930 NSPIGLAVARVTAT 943
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 459 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 518
Query: 67 SL 68
L
Sbjct: 519 YL 520
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 559 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 618
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 619 DAAVGTSVVTVSA---VDRDAHS 638
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 238 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 297
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 298 NLEVGYEVLTVRATDG 313
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + I L++ D NDNAP+F+ +
Sbjct: 346 IRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQV 405
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 406 REDVSPGA 413
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 764 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 823
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 824 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 852
>gi|410224162|gb|JAA09300.1| protocadherin gamma subfamily A, 12 [Pan troglodytes]
Length = 938
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 195 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 254
Query: 61 ENAEIGS-LSTVNAT---IGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 255 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 295
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 412 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 471
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 472 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 506
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ EN+ G+
Sbjct: 309 LDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGT 366
Query: 68 L 68
L
Sbjct: 367 L 367
>gi|313224590|emb|CBY20381.1| unnamed protein product [Oikopleura dioica]
Length = 974
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A+ LDRE++ Y ++ D P I++ + D+NDNAP F + +ILE
Sbjct: 397 LKVAKPLDRERVHLYRIDLRAADNGSPPLTTTKTISIKVEDVNDNAPFFQRDMYHVNILE 456
Query: 62 NAEIG-SLSTVNAT 74
N +G S+ ++ AT
Sbjct: 457 NNNVGKSIVSLKAT 470
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LD E +R+ + DR P+ + + + + + D NDN P F V S
Sbjct: 499 DLIALQSLDAELNSRHVIRIIAVDRGSPSLKGETSVVINVLDENDNDPAFEQVEYDFSFP 558
Query: 61 ENAE----IGSLSTVNA 73
EN E IG+++ ++A
Sbjct: 559 ENTEEGETIGTVAAIDA 575
>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
jacchus]
Length = 4349
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P + S + + + DINDN P F+
Sbjct: 1194 LSTARQLDRENKDEHILEVTVLDNGEPPLKSTSRVVVGILDINDNPPAFS 1243
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQSQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTIAAPLDYETTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSRAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D + +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYNFHVVAYDHGRTIQLSSQALVQVSITDENDNAPRFASEEYRGSVI 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP V+ + +TL D+NDN+P+ + +N
Sbjct: 874 ELVVTGHLDRESEPQYILK--VEARDQPRKGHQLFSVTDLIVTLEDVNDNSPQCITELNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + N V+ D C + +TL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTPLDRER--KDVFNLVVKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + ++ + + +TD+N++ P F + +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECTRKSSSSLSDITTVVVNITDVNEHRPRFPQDPYNTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLVGGNQLGH 3368
>gi|113866009|ref|NP_444359.3| protocadherin beta 4 precursor [Mus musculus]
gi|13876310|gb|AAK26075.1| protocadherin beta 4 [Mus musculus]
gi|31418686|gb|AAH53098.1| Protocadherin beta 4 [Mus musculus]
Length = 784
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTSYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|432914323|ref|XP_004079055.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 1006
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREKI Y L +D P + ++ T+ LTD NDNAP F+ + +++EN G+
Sbjct: 416 LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNPPGA 475
Query: 68 LST 70
T
Sbjct: 476 YIT 478
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A Y L D P+ + I + + D NDN+P F S +
Sbjct: 190 ELVLMKELDRETQASYALELVAMDGGNPSRSGTTRINIKVKDYNDNSPVFDRKSFSVDLR 249
Query: 61 ENAEIGSL 68
E+A +GSL
Sbjct: 250 EDAPVGSL 257
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL---------ITLTLTDINDNAPEFA 51
+L +DRE+I ++TL + A++ VS I + + DINDN+PEF
Sbjct: 78 QLSIGERIDRERICKHTLQCLI------AFDVVSFSKEQFKLIHIEVEVKDINDNSPEFP 131
Query: 52 SVINSASILENAEIGSLS----TVNATIGVN 78
+S I EN +G+ V+ +GVN
Sbjct: 132 RKESSLEISENTAVGTRIPLDFAVDEDVGVN 162
>gi|410929927|ref|XP_003978350.1| PREDICTED: uncharacterized protein LOC101071407 [Takifugu rubripes]
Length = 1492
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
A GLDREK +YTL D V+ + LT+TD NDNAP F AS+ EN
Sbjct: 999 AGGLDREKYPKYTLEVQAADMQGDGLTGVAKVILTVTDSNDNAPAFTQSSYEASVAEN 1056
>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
garnettii]
Length = 2919
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 871 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 930
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 931 NSPIGLAVARVTAT 944
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 460 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 519
Query: 67 SL 68
L
Sbjct: 520 YL 521
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 560 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 619
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 620 DAAVGTSVVTVSA---VDRDAHS 639
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + VQD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 239 VTTAEELDRETKNTHVFRVTVQDHGMPRRSALATLTIMVTDTNDHDPVFEQQEYKESLRE 298
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 299 NLEVGYEVLTVRATDG 314
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 347 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQV 406
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 407 REDVTPGA 414
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 765 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 824
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 825 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 853
>gi|345787797|ref|XP_848507.2| PREDICTED: protocadherin Fat 3 isoform 9 [Canis lupus familiaris]
Length = 4557
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + GLD E ++ L +D PA V+ +++ LTD+NDN P F+ + SA I E
Sbjct: 3293 ISVSEGLDYELCKKFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISE 3352
Query: 62 NAEIG 66
+A +G
Sbjct: 3353 DALVG 3357
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S I L L D+NDN P F+S + +
Sbjct: 3084 ELKTLALLDRERVPMYSLIARATDGG--GRFCQSDIHLILEDVNDNPPVFSSDHYNTCVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDVGINR 3164
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D P + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPVMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLLPMDREHTDLYLLNITIYDLGDPQKSSWRLLTINVEDANDNSPVFLQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P E + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + L D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 2348 TARMLDHESVQHCILKIRATDNGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVFAHEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|119514232|gb|ABL75895.1| protocadherin 2G20 [Takifugu rubripes]
Length = 963
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ TL D P I +T+ D NDNAP F + ASI+
Sbjct: 206 EMVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVYKASIM 265
Query: 61 ENAEIGS-LSTVNAT 74
EN +IGS + TVNAT
Sbjct: 266 ENTKIGSNVVTVNAT 280
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
DRE +++Y + D P + + L ++D+NDNAP F SA I+EN G
Sbjct: 423 FDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGT 482
Query: 67 SLSTVNA 73
S+ TV+A
Sbjct: 483 SIFTVSA 489
>gi|351708750|gb|EHB11669.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Heterocephalus glaber]
Length = 2976
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 934 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 993
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 994 NSPIGLAVARVTAT 1007
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 523 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 582
Query: 67 SL 68
L
Sbjct: 583 YL 584
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 623 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTIVDVNDNNPTFTQPEYTVRLNE 682
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 683 DAAVGTSVVTVSA---VDRDAHS 702
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 302 VTTAEELDRETKSTHVFRVTAQDHGVPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 361
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 362 NLEVGYEVLTVRATDG 377
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 828 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 887
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 888 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 916
>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
Length = 2920
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 870 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEE 929
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 930 NSPIGLAVARVTAT 943
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 459 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 518
Query: 67 SL 68
L
Sbjct: 519 YL 520
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 559 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 618
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 619 DAAVGTSVVTVSA---VDRDAHS 638
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 238 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 297
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 298 NLEVGYEVLTVRATDG 313
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + I L++ D NDNAP+F+ +
Sbjct: 346 IRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQV 405
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 406 REDVAPGA 413
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 764 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 823
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 824 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 852
>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
taurus]
Length = 2920
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 870 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEE 929
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 930 NSPIGLAVARVTAT 943
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 459 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 518
Query: 67 SL 68
L
Sbjct: 519 YL 520
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 559 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 618
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 619 DAAVGTSVVTVSA---VDRDAHS 638
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 238 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 297
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 298 NLEVGYEVLTVRATDG 313
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + I L++ D NDNAP+F+ +
Sbjct: 346 IRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQV 405
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 406 REDVAPGA 413
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 764 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 823
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 824 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 852
>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
norvegicus]
gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
Length = 2919
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 873 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 932
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 933 NSPIGLAVARVTAT 946
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 462 LDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 521
Query: 67 SL----STVNATIGVN 78
L ++A G N
Sbjct: 522 YLVLHVQAIDADAGEN 537
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 621
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 622 DAAVGTSVVTVSA---VDRDAHS 641
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 241 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 300
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 301 NLEVGYEVLTVRATDG 316
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTL--NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y L A Q RD +++ L++ D NDNAP+F+ +
Sbjct: 349 IRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAVVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 409 REDVTPGA 416
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 767 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 826
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 827 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 855
>gi|74141386|dbj|BAE35975.1| unnamed protein product [Mus musculus]
Length = 784
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTSYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNA +F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAAQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|311250345|ref|XP_003124107.1| PREDICTED: protocadherin gamma-A2-like [Sus scrofa]
Length = 825
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + +D P+ + + L + DINDN P F SA I E
Sbjct: 403 LVTARVLDREQVSSYNITVTAKDGGNPSLSTDAHVLLQVADINDNPPTFLHTSYSAYIPE 462
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA + N T +G L Y
Sbjct: 463 NNPRGASIFSMTAHDPDSDDNAHVTYNVAEDTLQGAPLSSY 503
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+ A + L D P S I + + D NDNAP F S+
Sbjct: 192 ELVLEGALDREEEAVHHLVLVALDGGDPVKSGTSRIRVIVLDANDNAPVFTQPEYRVSVP 251
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TV AT
Sbjct: 252 ENTPVGTRILTVTAT 266
>gi|260795106|ref|XP_002592547.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
gi|229277768|gb|EEN48558.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
Length = 1894
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE I YTL D P++ + +T+T+ D NDN P F S + S ++ E
Sbjct: 1632 VRTAQALDRENIDSYTLTVQATDNGVPSFNNDTTVTITIDDENDNTPAFDSNLYSFTLEE 1691
Query: 62 NAEIGS 67
N G+
Sbjct: 1692 NVAGGT 1697
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSA 57
EL A LDRE YTL D + + +S + +TL D+NDN P F + +
Sbjct: 1099 ELSVALPLDREYTDSYTLTVKAMDSPSNSSQALSNFTTVNITLEDVNDNHPIFTPSVYTT 1158
Query: 58 SILENAEIGS----LSTVNATIGVNRC 80
S+LE A +GS L+ +A +G N
Sbjct: 1159 SVLEGAAVGSQLLQLTATDADLGNNSV 1185
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ +DRE +A L D PA + + + L D+NDN P F + S+LE
Sbjct: 1421 ISTSADVDRETLALNNLVVQATDSGTPAKSSLCRVKVYLNDLNDNTPSFVPLEYVVSVLE 1480
Query: 62 NAEIGSLST 70
NA +G+L T
Sbjct: 1481 NAAVGTLVT 1489
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN-SASILENAEIG 66
+DRE IA Y++ VQD P+ + +T++D+NDNAP F + +A++ ENAE G
Sbjct: 1744 IDRETIAEYSIICRVQDSGTPSLFSDVTVQITVSDVNDNAPIFNNNDTLTATLAENAEPG 1803
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++TA LDRE I YTL D P + +T+ D+NDN P +AS+
Sbjct: 1526 IRTASTLDRESIESYTLTITATDGGTPTNLTGSGTVLVTILDVNDNTPVLTQASYTASVS 1585
Query: 61 ENAEIGS 67
E G+
Sbjct: 1586 EGVTAGT 1592
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW---ECVSLITLTLTDINDNAPEFASVINSAS 58
L A+ LDRE IA Y+L D + +T+ D NDN P F S++ S
Sbjct: 566 LSVAKKLDRETIASYSLEVLAIDGGDSFGTYRNSTVRVNITVIDENDNPPTFDSLVMYTS 625
Query: 59 ILENAEIGS 67
+LE+A G+
Sbjct: 626 VLESAPEGT 634
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A+ LD E + Y+L V D + + + +T+T++ND P F+ S ++
Sbjct: 460 EITIAKDLDLEVTSFYSLGVQVSDSGALSLTGTATVYVTVTNVNDFVPAFSESSYSFNVS 519
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 520 ESESVGT 526
>gi|148678220|gb|EDL10167.1| protocadherin beta 4 [Mus musculus]
Length = 784
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE IA Y + V D P I + ++DINDNAP F + + E
Sbjct: 402 LATERPLDRESIAEYNITITVSDMGTPRLTTQHTIKVQVSDINDNAPAFTQTSYTLFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTTVHIEIMDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGS-LSTVNA 73
EN + + L TV+A
Sbjct: 253 ENFPLDALLVTVSA 266
>gi|387017890|gb|AFJ51063.1| Protocadherin 1 [Crotalus adamanteus]
Length = 1046
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F + A + EN+ IG
Sbjct: 226 LDREQSESYDLTIRVQDGGSPPRASSALLRITILDMNDNAPKFEKPLYEAELSENSPIG 284
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE+ RY D+ P+ + + I +++ D NDN P+F + S+
Sbjct: 551 EIHVKNVLDREQQERYEFLVVATDKGSPSRKGTASIAISVMDRNDNDPKFMLSGYNFSVT 610
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 611 ENMPPLSPVGMVTVIDADKGDN 632
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + YT+ D P + + + + D+NDN P F+ + E
Sbjct: 446 LQTTTPLDYEAVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNDPVFSQSSTEVAFPE 505
Query: 62 N 62
N
Sbjct: 506 N 506
>gi|390459323|ref|XP_003732274.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-17-like
[Callithrix jacchus]
Length = 723
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P S + + + DINDNAPEFA + +
Sbjct: 194 ELVLDQALDREEQPQLRLTLTALDGGSPPRTGTSQVLIVIVDINDNAPEFAQRLYEVQVP 253
Query: 61 ENAEIGSL-STVNAT 74
EN IGSL TV+AT
Sbjct: 254 ENTPIGSLVVTVSAT 268
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 404 LLTEGALDRERRAEYNITITVTDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 464 NNSPALHIGTVSATDRDSGTN 484
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + DINDNAPE + + I
Sbjct: 301 EIRLKKVLDFEEIQSYHVEVEASDGGGLSEKCT--VVIEVMDINDNAPELTMSLLISDIP 358
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S TV A G++
Sbjct: 359 EN----SPETVVAVFGIS 372
>gi|327533702|pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain
gi|327533703|pdb|3Q2V|B Chain B, Crystal Structure Of Mouse E-Cadherin Ectodomain
Length = 550
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 120 GAVPGTSVMKVSAT 133
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 178 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNA 237
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 238 RIATLKVT 245
>gi|198250508|gb|ACH85236.1| paraxial protocadherin [Xenopus laevis]
Length = 979
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE IA YTL +D P+ + T+ ++D NDNAP F+ ASILEN
Sbjct: 411 TTSTLDRENIAEYTLTVVAEDLGFPSLKTKKYYTVKVSDENDNAPVFSKPQYEASILENN 470
Query: 64 EIGSLST 70
GS T
Sbjct: 471 APGSYIT 477
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE Y + D P+ +++ + + D NDN+P F + ++
Sbjct: 189 DLVLMRELDREIQPTYIMELLAMDGGVPSLSGTAVVNIRVLDFNDNSPVFERSTIAVDLV 248
Query: 61 ENAEIGSL 68
E+A +G L
Sbjct: 249 EDAPLGYL 256
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K R LDRE I+ YTL D P + + + ++D+NDNAP F+ S +
Sbjct: 3391 EVKVTRLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSQENYSLIVQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK LDRE A Y N V+ D C + I LTL D+NDN PEF + + ++
Sbjct: 3078 ELKILTALDREHQAVY--NLLVKATDGGGRFCEANIVLTLEDVNDNPPEFTADPYTIAVF 3135
Query: 61 ENAEIGS-LSTVNAT 74
EN E G+ L+ V AT
Sbjct: 3136 ENTEPGTPLTRVQAT 3150
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + I + ++D+ND+AP F S + E
Sbjct: 1514 LYTSEKLDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDMNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE RY+LN V D P L+ L + D NDN PEF + E
Sbjct: 774 LKVFSPLDRETKDRYSLNITVYDLGIPQKATWHLLDLIVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVNS 839
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ +ILE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDAILEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDFEQSQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDRQIYEAKISEHAAP 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GQFVT 2410
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK A Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLKELDHEKRANYQIKVVASDHGEKVQLSSTAVVDVTITDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2929 EDDPPGGVIAILSTTDA 2945
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQF 1245
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL D+ P S + +++ DINDN P F A++
Sbjct: 3181 IQLEKPLDRELQAVYTLTVKAVDQGLPRRLTATSSVIVSVLDINDNPPVFEYREYGATVS 3240
Query: 61 ENAEIGS 67
E+ IG+
Sbjct: 3241 EDILIGT 3247
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L + D+ + + + D+NDNAP+ + + ++E
Sbjct: 1091 IETCDRLDRESTSHYWLTVYAADQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEVME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR Y L D+ P ++ + + +T ++ +P+F S S I E
Sbjct: 1619 IKTAKELDRSNQVEYDLIVKATDKGNPPMSEITSVHVFVTVADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
GS
Sbjct: 1679 TVSTGSF 1685
>gi|348526057|ref|XP_003450537.1| PREDICTED: protocadherin-10-like [Oreochromis niloticus]
Length = 814
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ ++ LDRE I++Y + V D+ P ITL + DINDNAP F+ + ++
Sbjct: 408 EMLVSKPLDREVISKYDIILRVTDKGVPPLSENETITLEILDINDNAPTFSQSFYTIHVM 467
Query: 61 ENAEIGSLST 70
EN G+L T
Sbjct: 468 ENNPPGALLT 477
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A + L D P + I + + DINDNAP F+ + + ++
Sbjct: 193 DLVLSGNLDREEHAVHDLILTAVDGGVPPRSGTASIIINVLDINDNAPIFSQPVYAVNVS 252
Query: 61 ENAEIGS-LSTVNAT 74
EN+ G+ + T+NAT
Sbjct: 253 ENSAAGTVVMTLNAT 267
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K +D E+ + ++ QDR +T+ +TD+NDN PE +S+
Sbjct: 301 EIKVKGVIDYEESQSFEMHIQAQDRGTNPLSGHCKVTVFVTDLNDNYPEVTIKSLKSSLT 360
Query: 61 ENAEIGSLSTV 71
E+ +G+L V
Sbjct: 361 EDVAVGTLIAV 371
>gi|332234771|ref|XP_003266577.1| PREDICTED: protocadherin gamma-A1 [Nomascus leucogenys]
Length = 823
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERILDRELISEYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAY 504
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D +P I + + D NDN P F ++ EN +G+
Sbjct: 200 LDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLF 95
L VNAT G N ++F D R +F
Sbjct: 260 QLLMVNATDPDEGANGEVTYSFHNVDHRVAQIF 292
>gi|395853978|ref|XP_003799475.1| PREDICTED: cadherin-1 [Otolemur garnettii]
Length = 766
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I + +TD NDN PEF I S++E
Sbjct: 217 LKVTQPLDRENIAKYILFSHAVSSNGKAVEDPMEILIAVTDQNDNKPEFTQGIFRGSVME 276
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 277 GALPGTSVMQVTAT 290
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TDINDN P F + + EN
Sbjct: 335 GLDRESFPEYTLTVQAADLQGEGLSTTATAVITVTDINDNPPVFNPTVYQGQVPENEANV 394
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 395 LIATLKVT 402
>gi|118090637|ref|XP_420748.2| PREDICTED: protocadherin-7 [Gallus gallus]
Length = 1263
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L+ V+D +PA +++ + +TD+NDN+P F + A + EN+ G
Sbjct: 260 ALDREQRDSYELSLRVRDGGEPARSSQAILRVLITDVNDNSPRFEKSVYEADLAENSSPG 319
Query: 67 S----LSTVNATIGVN 78
+ L + +GVN
Sbjct: 320 TPILQLRAADLDVGVN 335
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 910 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 969
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 970 NSIVGSV 976
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 276 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 335
Query: 62 NAEIG 66
N E G
Sbjct: 336 NVEEG 340
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 605 LDRESVEHYFFGVEARDHGSPLLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 664
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 665 -SVVSVT 670
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 492 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 551
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 552 LENAPLGHSVIHIQAVDADHGEN 574
>gi|57529036|ref|NP_001009590.1| protocadherin 2 alpha b 11 precursor [Danio rerio]
gi|53748798|dbj|BAD52315.1| cadherin-related neuronal receptor variable 11 [Danio rerio]
gi|53748822|dbj|BAD52328.1| cadherin-related neuronal receptor variable 11 [Danio rerio]
Length = 940
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG+
Sbjct: 411 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 470
Query: 68 -LSTVNA 73
L TV+A
Sbjct: 471 VLHTVSA 477
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D +P I + + DINDN P F+ + A ++
Sbjct: 191 ELVLQKALDREKQPVIKLTLTAVDGGKPPKSGTMQIVVNIVDINDNIPVFSKSLYKALVI 250
Query: 61 ENAEIGS-LSTVNA 73
ENA G+ + TV A
Sbjct: 251 ENAARGTHVVTVQA 264
>gi|149017322|gb|EDL76373.1| rCG49295, isoform CRA_i [Rattus norvegicus]
Length = 866
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE I Y + DR +P +ITL ++D+NDNAP F +
Sbjct: 402 KLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVIITLHISDVNDNAPVFHQASYLVHVA 461
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN A I +S + +G N
Sbjct: 462 ENNPPGASIAQVSASDPDLGSN 483
>gi|149017321|gb|EDL76372.1| rCG49295, isoform CRA_h [Rattus norvegicus]
Length = 928
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE I Y + DR +P +ITL ++D+NDNAP F +
Sbjct: 402 KLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVIITLHISDVNDNAPVFHQASYLVHVA 461
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN A I +S + +G N
Sbjct: 462 ENNPPGASIAQVSASDPDLGSN 483
>gi|57528929|ref|NP_001009594.1| protocadherin 2 alpha b 7 precursor [Danio rerio]
gi|53748794|dbj|BAD52311.1| cadherin-related neuronal receptor variable 7 [Danio rerio]
gi|53748814|dbj|BAD52324.1| cadherin-related neuronal receptor variable 7 [Danio rerio]
Length = 939
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG+
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 68 -LSTVNA 73
L TV+A
Sbjct: 470 VLHTVSA 476
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +PA I + + D NDN P F + A
Sbjct: 190 ELVLQKALDREKQPVIRLTLTA--VDGGKPARSGTVNIIVKIIDANDNIPVFTKSLYKAR 247
Query: 59 ILENAEIG-SLSTVNA 73
I ENA +G S+ TVNA
Sbjct: 248 IPENAPVGTSIITVNA 263
>gi|350591205|ref|XP_003483227.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like [Sus
scrofa]
Length = 2864
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 572 VRTVRWLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 631
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 632 NSIVGSV 638
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
L RE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 267 LTRESVEHYFFGVEARDHGSPPLSASARVTVTVLDVNDNRPEFTMKEYHLRLNEDATVGT 326
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 327 -SVVSVT 332
>gi|261289565|ref|XP_002604759.1| hypothetical protein BRAFLDRAFT_222389 [Branchiostoma floridae]
gi|229290087|gb|EEN60769.1| hypothetical protein BRAFLDRAFT_222389 [Branchiostoma floridae]
Length = 128
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 1 ELKTARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
ELK G LDRE Y L +DR P+ +T+T+ D NDNAP F+ + S+
Sbjct: 50 ELKVTSGHLDRETTETYELTIFARDRGSPSKTGTQSMTITILDCNDNAPIFSQNVYKFSV 109
Query: 60 LENAEIG-SLSTVNATIG 76
E+ +G +++T++AT G
Sbjct: 110 REDVGVGTTIATISATDG 127
>gi|56606152|ref|NP_001008484.1| protocadherin 2 alpha b 3 precursor [Danio rerio]
gi|53748790|dbj|BAD52307.1| cadherin-related neuronal receptor variable 3 [Danio rerio]
gi|53748806|dbj|BAD52320.1| cadherin-related neuronal receptor variable 3 [Danio rerio]
gi|190338350|gb|AAI63307.1| Protocadherin 2 alpha b 3 [Danio rerio]
Length = 939
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ S+I + + DINDN P F+ + S+
Sbjct: 190 ELVLQKALDREKKPVIQLTLTTVDGGTPSKTGTSIIMVKVLDINDNTPVFSKPLYKTSVF 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA IG +++ +NAT
Sbjct: 250 ENAAIGTTIAVLNAT 264
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 305 IDFEENNAFEIRAQASDKGQPPMSTHCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 364
>gi|410924908|ref|XP_003975923.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 997
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREKI Y L +D P + ++ T+ LTD NDNAP F+ + +++EN G+
Sbjct: 418 LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA 477
Query: 68 LST 70
T
Sbjct: 478 YIT 480
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A Y L D P+ + I + + D NDN+P F S +
Sbjct: 192 ELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINIKVKDYNDNSPVFDRNSFSVDLP 251
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 252 EDAPVGTL 259
>gi|395817817|ref|XP_003782344.1| PREDICTED: uncharacterized protein LOC100956225 [Otolemur garnettii]
Length = 1897
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P S + + + DINDNAPEF + A +
Sbjct: 1487 ELVLDKALDREEQPQLRLTLTAMDGGSPPRTGTSQVLIVILDINDNAPEFVQRLYEAQVP 1546
Query: 61 ENAEIGSL 68
EN+ IGSL
Sbjct: 1547 ENSPIGSL 1554
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P S I + + DINDNAPEF A +
Sbjct: 934 ELVLDKALDREEQPQLRLTLTALDGGSPPRSGTSEIQIQVLDINDNAPEFTQEFYEAQVP 993
Query: 61 ENAEIGSL-STVNA 73
EN+ GSL +TV+A
Sbjct: 994 ENSPFGSLITTVSA 1007
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE A+Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 402 LVTQKPLDRESKAQYNITITVTDLGTPRLKTEHSITVLISDVNDNAPAFTQTSYTLFVGE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 462 NNSPALHIGTISATDRDSGTN 482
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++L D P + + + + D NDNAPEF + +
Sbjct: 193 ELVLDKELDREEQPEFSLTLTALDGGAPPRSGTATVLIVVLDNNDNAPEFLQSLYEVQVP 252
Query: 61 ENAEIGSL 68
EN+ + SL
Sbjct: 253 ENSPLNSL 260
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L T LDRE A Y + V D P + IT+ ++DINDNAP F
Sbjct: 1143 LVTEGALDRETRAEYNVTITVTDLGTPRLKTQLNITVLVSDINDNAPAF 1191
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
L+RE A+Y + V D P + IT+ ++D+NDNAP F + + EN
Sbjct: 1703 LNRETRAQYNITITVTDMGTPRLKTEHSITVLISDVNDNAPTFTQTSYTLFVRENNSPAL 1762
Query: 64 EIGSLSTVN 72
IG++S +
Sbjct: 1763 HIGTISATD 1771
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + DINDNAPE + + I
Sbjct: 1594 EIRLKKVLDFEEIQSYRMEVEASDGGGLSGKCA--VVIEVMDINDNAPELTMSLLISDIP 1651
Query: 61 ENA 63
EN+
Sbjct: 1652 ENS 1654
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 865 VRTVRRLDRESVPVYELTAYAVDRGVPPLRTPVNIQVTVQDVNDNAPVFPAEEFEVRVKE 924
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 925 NSIVGSV 931
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 560 LDRESVEHYFFGVEALDHGSPPLSASASVTITVMDVNDNRPEFTQKEYHLRLNEDAAVG- 618
Query: 68 LSTVNATIGVNR 79
++V + V+R
Sbjct: 619 -TSVLSVTAVDR 629
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 447 EIQVVAPLDFEVEREYALRIRAQDSGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 506
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 507 LENAPLGHSVIHIQAVDADHGEN 529
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + D P +++ +T+ D ND+AP F +I E
Sbjct: 235 ISTAEPLDRESMDLHYFRVTALDHGSPRLSATTMVAVTVADRNDHAPVFEQAEYRETIRE 294
Query: 62 NAEIG 66
N E G
Sbjct: 295 NVEEG 299
>gi|326928251|ref|XP_003210294.1| PREDICTED: protocadherin-1-like [Meleagris gallopavo]
Length = 1198
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F + A + EN+ +G
Sbjct: 203 LDREQWDSYDLTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALYEAELSENSPVG 261
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ RY D+ P+ + + + + + D NDN P+F + S++
Sbjct: 528 EIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVM 587
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 588 ENMPPLSPVGMVTVIDADKGEN 609
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + YT+ D P + + + + D+NDNAP F+ + E
Sbjct: 423 LQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPE 482
Query: 62 NAEIGSL 68
N E L
Sbjct: 483 NNEPNDL 489
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 38 LTLTDINDNAPEFASVINSASILENAEIGSLSTV 71
+ + DINDN P FAS + + +I EN IG+L ++
Sbjct: 121 IEVLDINDNTPNFASPVLTLTIPENTNIGALFSI 154
>gi|260832658|ref|XP_002611274.1| hypothetical protein BRAFLDRAFT_210978 [Branchiostoma floridae]
gi|229296645|gb|EEN67284.1| hypothetical protein BRAFLDRAFT_210978 [Branchiostoma floridae]
Length = 567
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
AR LDRE + Y + QD P I L +TDINDNAPEF + S+ E A
Sbjct: 376 ARPLDREVVPNYQIRVIAQDSGAPPLTVDRTINLQVTDINDNAPEFVGSY-APSLSEAAP 434
Query: 65 IGS----LSTVNATIGVN 78
IG+ L+ + IGVN
Sbjct: 435 IGTSVFQLTARDRDIGVN 452
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD+E Y L + D P + + +T+ D+NDN P F SA +L
Sbjct: 155 ELVVSNPLDKETTPEYNLIIYAYDGGTPPRSGSTTVRVTVGDVNDNQPIFTQSRYSAEVL 214
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 215 ENATVGT 221
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 2 LKTARGL-DREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L T R + DRE + D PA +T+TL D NDN P F +A++L
Sbjct: 478 LITTRAIVDREIDPSPRITIDATDHGTPAMSTTIQVTVTLLDFNDNEPIFNPTFYNATVL 537
Query: 61 ENAEIG 66
E+ ++G
Sbjct: 538 EDEDVG 543
>gi|443684191|gb|ELT88200.1| hypothetical protein CAPTEDRAFT_144602, partial [Capitella
teleta]
Length = 377
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA+ LDRE IA+Y L +D + + + + D+NDN+P F SA+++
Sbjct: 12 QVLTAKVLDREMIAKYNLALICKDGGSDPLIAIQHLQVNIDDVNDNSPIFGQTSYSATLI 71
Query: 61 ENAEIGSLST-VNAT 74
EN+ IG+ T VNAT
Sbjct: 72 ENSYIGAFVTQVNAT 86
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R +D E+ + L + D P +L+ +++ D+ND P F + S SI EN
Sbjct: 120 RSMDHEEHENFQLYVNATDHGSPRRSSSALVVISIEDVNDETPTFTESLFSFSIEENKPS 179
Query: 66 G 66
G
Sbjct: 180 G 180
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LK+ LDREK + Y L D++QPA + + + D NDN P F
Sbjct: 222 LKSRTSLDREKQSVYHLAIIATDQNQPALSSSCSVVIYIMDENDNKPVF 270
>gi|56606146|ref|NP_001008483.1| protocadherin 2 alpha b 5 precursor [Danio rerio]
gi|53748810|dbj|BAD52322.1| cadherin-related neuronal receptor variable 5 [Danio rerio]
Length = 941
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 412 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 471
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 472 VLHTVSAVDPDVGDN 486
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P S I + + D NDNAP F+ + AS++
Sbjct: 192 ELVLQKALDREKQPLVQLTLTAADGGNPPKSGTSQIIIRVLDNNDNAPVFSRPLYKASLV 251
Query: 61 ENAEIGS-LSTVNAT 74
EN IGS + +NAT
Sbjct: 252 ENVPIGSTVIIINAT 266
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
EK + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 310 EKNNAFEIRAQASDKGQPPMSTHCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 366
>gi|149017323|gb|EDL76374.1| rCG49295, isoform CRA_j [Rattus norvegicus]
Length = 857
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE I Y + DR +P +ITL ++D+NDNAP F +
Sbjct: 402 KLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVIITLHISDVNDNAPVFHQASYLVHVA 461
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN A I +S + +G N
Sbjct: 462 ENNPPGASIAQVSASDPDLGSN 483
>gi|293343054|ref|XP_002725363.1| PREDICTED: protocadherin gamma-B2-like [Rattus norvegicus]
Length = 820
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE I Y + DR +P +ITL ++D+NDNAP F +
Sbjct: 402 KLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVIITLHISDVNDNAPVFHQASYLVHVA 461
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN A I +S + +G N
Sbjct: 462 ENNPPGASIAQVSASDPDLGSN 483
>gi|397518018|ref|XP_003846028.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-12 [Pan
paniscus]
Length = 802
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 403 LETERPLDRESRAEYNITITVTDLGTPRLKTEHNITLLISDVNDNAPAFTQTSYTLFLRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSISATDRDSGTN 483
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E++ + D P +L+ + + DINDN+PEF IL
Sbjct: 193 ELVLDKALDYEELPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIL 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSILGSLVVTVSA 266
>gi|395504784|ref|XP_003756727.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 840
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+I+ Y + V D+ P + I L + DINDN+P F SA I EN
Sbjct: 407 RALDREQISMYNVTVTVTDQGTPLLSTDTYIPLQVEDINDNSPSFGQTSYSAYIHENNAR 466
Query: 66 GS 67
GS
Sbjct: 467 GS 468
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D P + I + + D NDNAP F + S S+
Sbjct: 192 ELVLEKALDREEESVHHLLLKAWDGGDPGLSGTARIRVLVLDANDNAPVFTQSVYSVSVP 251
Query: 61 ENAEIGSLST-VNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN GSL VNAT GVN ++FR D + +F+
Sbjct: 252 ENLPKGSLLLWVNATDSDEGVNGEVTYSFRNIDDKASEIFQ 292
>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
Length = 3938
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+I+ Y+L D QP + + + + D+NDN P F + S S+
Sbjct: 3323 ELQVAKTLDWEQISSYSLRLRATDNGQPPLHEDTDVAIQVVDVNDNPPRFFQLNYSTSVQ 3382
Query: 61 ENAEIGS 67
EN+ GS
Sbjct: 3383 ENSPTGS 3389
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2274 EMSTVQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2333
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2334 ELATCGHL 2341
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P S + + + D+NDN P F+
Sbjct: 1193 LSTARQLDRENKDEHILEVTVLDNGEPTLRSTSRVVVRILDVNDNPPVFS 1242
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E + Y LN V D P ++T+ + D NDNAP F ++ E
Sbjct: 771 LTIASPLDYEATSFYILNVTVYDLGTPQKSSWKVLTVNVEDWNDNAPRFPPGGYQVTVSE 830
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 831 DTEVGT 836
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK Y+L A D C + +TL + D+NDNAP F + ++
Sbjct: 3012 ELITLTALDREKKDVYSLVAKATDGG--GQSCQADVTLHVEDVNDNAPRFFPSHCAVAVF 3069
Query: 61 ENAEI 65
+N +
Sbjct: 3070 DNTTV 3074
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE ++ Y L DR V+ + + +TD+NDN P+ + + S+ E
Sbjct: 1088 IQTVAPLDREFMSCYWLTVQAVDRGSVPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVRE 1147
Query: 62 NAEI 65
+A +
Sbjct: 1148 DAPL 1151
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G DRE+ + + ++D P +L+ +++ D+NDN PEF + I + E G
Sbjct: 1971 GFDREQQDTHEVAVELRDNRTPQRVAQALVRVSIEDVNDNCPEFKHLPYHTIIQDGTEPG 2030
Query: 67 ----SLSTVNATIGVN 78
+S + +GVN
Sbjct: 2031 DVLFQVSATDQDLGVN 2046
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E +Y L+ + + ++ I + +TDIN++ P F+ + S + E
Sbjct: 3219 LYVNKSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNVTDINEHRPRFSQDLYSTRVSE 3278
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G L TV+AT +G N+ GH
Sbjct: 3279 NAIVGDLVLTVSATDEDGPLNSAITYSLVGGNQLGH 3314
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNATIG 76
L+ +++TD NDNAP FAS S++EN+E G +L T++A I
Sbjct: 2837 LVEVSITDENDNAPRFASEDYRGSVVENSEPGEPVATLKTLDADIA 2882
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
L R LD E+ A Y L+ D +P A + + + + D+N+N P FAS ++
Sbjct: 980 LSLERELDFERRAGYNLSLWASDSGRPIARRTLCHVEVIVLDVNENLHPPRFASFVHQGQ 1039
Query: 59 ILENAEIGSLSTVNA 73
+ EN+ G+ TV A
Sbjct: 1040 VQENSPSGTSVTVVA 1054
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE +A+Y L D ++ L+ + + D+NDN+P+ + ++ + + E+ +
Sbjct: 2916 KTLDREHMAKYLLRVTASD---GKFQASVLVEIFVLDLNDNSPQCSQLLYTGKVSEDVPL 2972
Query: 66 G 66
G
Sbjct: 2973 G 2973
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE ++Y L V+ RDQP V+ + +TL D NDN+P+ + +
Sbjct: 873 ELVVTGHLDRESESQYILK--VEARDQPRKGHQLFSVTDLIVTLEDANDNSPQCITELRR 930
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 931 LKVPEDLPPGTILT 944
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LDRE Y LN +DR P+ S + + + D NDN P F SAS+ E
Sbjct: 2268 LRVADALDRELRLNYVLNITARDRGDPSLSTQSQLKIKILDENDNIPVFDPKQYSASVAE 2327
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2328 NASIGAM 2334
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I+ Y L D+ P + + L L D NDN P+F + S ++
Sbjct: 2902 EIYTTMRLDREEISDYALVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRLY-SLNVT 2960
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2961 ENAEIGSF 2968
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E+ +Y + D D+P+ V+L+ + +TD NDN P +I +A ILE
Sbjct: 2805 GLDYEQTHQYEIWVEAADSDRPSLRTVTLLNINVTDANDNPPVMEKLIYNAEILE 2859
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEFASVINSASI 59
+L T + LDRE +A Y + +D+ PA + + + L++ DINDN PEF ++
Sbjct: 677 QLMTRQPLDRETMANYEIFVIARDQGAPAPQSATATVYLSIADINDNNPEFYPKHYIYTL 736
Query: 60 LENAEIGSLSTVNAT 74
EN + SL V AT
Sbjct: 737 KENNMLRSLLNVTAT 751
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E++ Y L QD QP+ + + D+NDN P F + S+ I EN IG
Sbjct: 2018 LDYEEVQHYILIVQAQDNGQPSLTTTITVYCNVLDLNDNTPLFDPMSYSSEIFENVPIG 2076
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDRE + Y L D P ++++ + DINDN P F A I
Sbjct: 2480 EIVLLRSLDRELQSEYILTLVAMDTGSPPLSNTGVVSVEVQDINDNGPVFELQYYHALIE 2539
Query: 61 ENAEIGSL 68
EN IGSL
Sbjct: 2540 ENLPIGSL 2547
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L D+ QPA +S L+T+ + D+NDNAP F S+ +A+
Sbjct: 1570 IYTLREIDRESIDNFRLTVVATDQAQPAERQLSTEKLVTVIVEDVNDNAPIFVSM--NAA 1627
Query: 59 ILENAEIGSLS 69
IL GS+S
Sbjct: 1628 ILPILVDGSIS 1638
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L D P+ V + + + D NDNAP+F + + +I ENA
Sbjct: 1125 LDREERDYYALTVSCSDAGTPSRSSVVPVVIHVIDENDNAPQFTNSTFTFNIPENAPADT 1184
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1185 FVGKLTAVDRDIGRN 1199
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I++Y L D+ P + ++ + + + D+ND+ P F SA + E A GS
Sbjct: 471 LDREEISKYNLTVVAIDKGTPERKAIAHLIINVNDVNDHEPVFEKSEYSAVLSELAPTGS 530
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN + G +L+ +N+
Sbjct: 531 FVASIAATDEDTGVNAQVYYEILTGNELKWFNI 563
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE IA Y L D P + + + L DINDN P F + I
Sbjct: 3641 EISTASLLDREDIAHYNLVIGAIDTGLPPQTGTATVRIDLDDINDNGPTFTAEGLLGYIS 3700
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3701 ENEPAGT 3707
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD + + Y LN V+D V+++++ LTD+NDN P F I EN +
Sbjct: 3329 QPLDYDLMQEYHLNITVEDLGYKPLSAVAMLSIILTDVNDNPPIFNQSEYHGYIAENKPV 3388
Query: 66 GS 67
G+
Sbjct: 3389 GT 3390
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ A +DRE+ Y L D AW + IT+T+ D NDNAPEF
Sbjct: 3006 ITVAGQIDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEF 3051
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEF-ASVIN 55
E+ TA LDRE IA Y L QD +P V+L T+ + D NDN P+F AS+ N
Sbjct: 2584 EITTATVLDRETIAIYHLTLMAQDSSITEPRATSVNL-TIAVEDNNDNVPKFEASIFN 2640
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN D P + +T+ D+NDN P F S ++ E
Sbjct: 234 LETTGNLDRESRGSYQLNISASDGGSPPRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNE 293
Query: 62 NAEIGS 67
GS
Sbjct: 294 TVMPGS 299
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R +D +R+ N DR P+ + + + +TD N PEF+++ + EN I
Sbjct: 3224 RPIDVPANSRFEFNVKATDRGVPSQSDQTRVIVIVTDENRYPPEFSALSYQVIVPENEPI 3283
Query: 66 GS-LSTVNAT 74
GS + TV+AT
Sbjct: 3284 GSTILTVSAT 3293
>gi|18087761|ref|NP_291066.1| protocadherin gamma-A5 precursor [Mus musculus]
gi|13876336|gb|AAK26088.1| protocadherin gamma A5 [Mus musculus]
gi|34785777|gb|AAH57404.1| Protocadherin gamma subfamily A, 5 [Mus musculus]
gi|148678193|gb|EDL10140.1| mCG133388, isoform CRA_w [Mus musculus]
Length = 932
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V DR P + I+L + DINDN P F+ S SI E
Sbjct: 404 LLTTRALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYSTSISE 463
Query: 62 NAEIG 66
N G
Sbjct: 464 NNPRG 468
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + + L D P I++T+ D NDNAP F S+
Sbjct: 193 ELVLEQPLDREKESAHDLVLTALDGGNPVLSSTVHISVTVLDANDNAPLFTQSEYRVSVP 252
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G +L+ +A G+N + +FR ++ + F+
Sbjct: 253 ENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQ 293
>gi|410913703|ref|XP_003970328.1| PREDICTED: protocadherin alpha-C2-like [Takifugu rubripes]
Length = 808
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 408 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 467
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 468 ENNAPGAL 475
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 195 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 254
Query: 61 ENAEIGSLST-VNAT 74
EN+ IGSL +NAT
Sbjct: 255 ENSPIGSLVIKLNAT 269
>gi|403256574|ref|XP_003920944.1| PREDICTED: uncharacterized protein LOC101029397 [Saimiri boliviensis
boliviensis]
Length = 2294
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P S + + + DINDNAPEFA + +
Sbjct: 1878 ELVLDQALDREEQTQLRLTLTALDGGSPPRTGTSQVLIVIVDINDNAPEFAQRLYEVQVP 1937
Query: 61 ENAEIGSL-STVNAT 74
EN IGSL TV+AT
Sbjct: 1938 ENTPIGSLVVTVSAT 1952
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R L D P S I + + DINDN PEFA + +
Sbjct: 1286 ELVLDKPLDREEQPRLRLTLTALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEVQVP 1345
Query: 61 ENAEIGSL 68
EN +GSL
Sbjct: 1346 ENNPLGSL 1353
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 402 LVTERPLDRESRDEYNVTITVTDLGTPRLKTQQTITLLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 62 N----AEIGSLS 69
N IGSLS
Sbjct: 462 NNSPALHIGSLS 473
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 903 LVTQRKLDRESQAEYNITITVTDLGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLFVRE 962
Query: 62 N 62
N
Sbjct: 963 N 963
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++L D P ++ + + D+NDNAPEF +L
Sbjct: 192 DLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIIDVNDNAPEFVHTPYRVQVL 251
Query: 61 ENAEIGS 67
EN+ + S
Sbjct: 252 ENSPLDS 258
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN- 62
T LDRE A Y + V D P + IT+ ++D+NDNAP F + + EN
Sbjct: 1497 TEGALDRETRAEYNVTITVTDLGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLFVRENN 1556
Query: 63 ---AEIGSLSTVNATIGVN 78
IGS+S + G N
Sbjct: 1557 SPALHIGSVSATDRDSGSN 1575
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 2088 LLTEGALDRERRNEYNITITVTDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRE 2147
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 2148 NNSPALHIGSVSATDRDSGSN 2168
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + + + + D NDNAPEF + I
Sbjct: 694 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTVRVVVLDNNDNAPEFLQSLYEVQIP 753
Query: 61 ENAEIGSL 68
EN+ + SL
Sbjct: 754 ENSSVNSL 761
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + DINDN PE + + I
Sbjct: 1985 EIRLKKVLDFEEIQSYHVEVEASDGGGLSEKCT--VAIEVMDINDNVPELTMSLLVSDIP 2042
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S TV A G++
Sbjct: 2043 EN----SPETVVAVFGIS 2056
>gi|392354649|ref|XP_574133.3| PREDICTED: protocadherin gamma-B2-like [Rattus norvegicus]
Length = 818
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE I Y + DR +P +ITL ++D+NDNAP F +
Sbjct: 402 KLVTDRTLDREAIPEYNVTIVATDRGKPPLSSKVIITLHISDVNDNAPVFHQASYLVHVA 461
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN A I +S + +G N
Sbjct: 462 ENNPPGASIAQVSASDPDLGSN 483
>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
Length = 2335
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 731 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 790
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 791 NSPIGLAVARVTAT 804
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASIL 60
L LD E YTL QD +P VS L+T+ + DINDNAP F S A++L
Sbjct: 290 LDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVL 349
Query: 61 ENAEIGSL 68
E+ +G L
Sbjct: 350 ESVPLGYL 357
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 420 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 479
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 480 DAAVGTSVVTVSA---VDRDAHS 499
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 75 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 134
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 135 NLEVGYEVLTVRATDG 150
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 183 IRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAAVFLSVEDDNDNAPQFSEKRYVVQV 242
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 243 REDVTPGA 250
>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
Length = 3188
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A Y L D P L+T+++ D+ND AP F S + E
Sbjct: 1491 LSVVRSLDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1550
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1551 NSPPGTSLLTLQAT 1564
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1696 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1755
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1756 EDAPAGTL 1763
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+++ D+NDN P F ++ E+ +G+
Sbjct: 2450 LDFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGA 2509
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A++
Sbjct: 204 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAAVS 263
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 264 ESLSPGS 270
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ Y L VQD P + + + D+NDN+P F +A
Sbjct: 1160 EVTTLQTLDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1216
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSAS 58
+L+ AR LD E AR+ L D PA +L +T+ + D+ND+ P F + S S
Sbjct: 2548 DLRLARPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTS 2604
Query: 59 ILENAEIGSLST 70
+ EN G+L T
Sbjct: 2605 LAENQPPGTLVT 2616
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 425 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 470
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +D P + + + D ND+AP F S S + E
Sbjct: 1593 LTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPE 1652
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1653 GQDPQTLTTLRASDPDVGAN 1672
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F I E
Sbjct: 99 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAVLQIPE 152
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 153 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 190
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1800 ELRTATTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPT 1852
>gi|301612918|ref|XP_002935959.1| PREDICTED: protocadherin alpha-6-like, partial [Xenopus (Silurana)
tropicalis]
Length = 803
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+I Y L D +P + + +T+ D+NDNAP F AS+L
Sbjct: 206 QLVLKKPLDREQIPFYNLTLTASDGGKPKLRGTAQLLITVQDVNDNAPVFDQPFYRASLL 265
Query: 61 ENAEIGSLS-TVNAT 74
ENA G+ VNAT
Sbjct: 266 ENALKGTFVFKVNAT 280
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A Y L D I + ++D+NDNAP F + + +I EN GS
Sbjct: 426 LDHEKTAEYELVITATDDGSVHLSDSKTIGIQVSDVNDNAPTFHQGLETINIKENNPPGS 485
Query: 68 -LSTVNAT 74
+ TV+A+
Sbjct: 486 HVYTVSAS 493
>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
Length = 3296
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A Y L D P L+T+++ D+ND AP F S + E
Sbjct: 1599 LSVVRSLDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1658
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1659 NSPPGTSLLTLQAT 1672
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1804 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1863
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1864 EDAPAGTL 1871
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+++ D+NDN P F ++ E+ +G+
Sbjct: 2558 LDFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGA 2617
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A++
Sbjct: 204 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAAVS 263
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 264 ESLAPGS 270
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ Y L VQD P + + + D+NDN+P F +A
Sbjct: 1160 EVTTLQTLDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1216
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 425 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 470
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSAS 58
+L+ AR LD E AR+ L D PA +L +T+ + D+ND+ P F + S S
Sbjct: 2656 DLRLARPLDCETQARHQLVVQASD---PAGVHFALAPVTIEVQDVNDHGPAFPLSLLSTS 2712
Query: 59 ILENAEIGSLST 70
+ EN G+L T
Sbjct: 2713 LAENQPPGTLVT 2724
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +D P + + + D ND+AP F S S + E
Sbjct: 1701 LTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPE 1760
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1761 GQDPQTLTTLRASDPDVGAN 1780
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F I E
Sbjct: 99 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAVLQIPE 152
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 153 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 190
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1908 ELRTATTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPT 1960
>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
Length = 3296
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A Y L D P L+T+++ D+ND AP F S + E
Sbjct: 1599 LSVVRSLDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1658
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1659 NSPPGTSLLTLQAT 1672
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1804 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVP 1863
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1864 EDAPAGTL 1871
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+++ D+NDN P F ++ E+ +G+
Sbjct: 2558 LDFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGA 2617
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A++
Sbjct: 204 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAAVS 263
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 264 ESLAPGS 270
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ Y L VQD P + + + D+NDN+P F +A
Sbjct: 1160 EVTTLQTLDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1216
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSAS 58
+L+ AR LD E AR+ L D PA +L +T+ + D+ND+ P F + S S
Sbjct: 2656 DLRLARPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTS 2712
Query: 59 ILENAEIGSLST 70
+ EN G+L T
Sbjct: 2713 LAENQPPGTLVT 2724
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 425 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 470
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +D P + + + D ND+AP F S S + E
Sbjct: 1701 LTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPE 1760
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1761 GQDPQTLTTLRASDPDVGAN 1780
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F I E
Sbjct: 99 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAVLQIPE 152
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 153 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 190
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1908 ELRTATTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPT 1960
>gi|262263260|tpg|DAA06563.1| TPA_inf: protocadherin alpha 4 unspliced isoform [Anolis
carolinensis]
Length = 812
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LDRE++A Y L QD P+ S + + + DINDN P FA + + E
Sbjct: 426 LVVAEALDREQVAEYKLVVTTQDHGTPSLSATSNLEVPIGDINDNTPTFAQTTYTVFVKE 485
Query: 62 NAEIGS-LSTVNAT 74
N G+ + TV+A+
Sbjct: 486 NNPSGAHIFTVSAS 499
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T LD E+ +Y + D+ I + + D+NDNAPE + S +
Sbjct: 319 EIRTKEKLDYEETRQYEIQVQASDKGSNPMTGYCSIVIEVLDVNDNAPEMSLKSLSVPVP 378
Query: 61 ENAEIGSLSTVNATIGVN 78
E+++ G TV A I V+
Sbjct: 379 EDSQPG---TVVALISVS 393
>gi|431892549|gb|ELK02982.1| Protocadherin gamma-B2 [Pteropus alecto]
Length = 692
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+I+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDGALDREEISEYNVTIMATDRGKPPLSSSITITLHITDVNDNAPVFQQSAYLVYVP 462
Query: 61 EN----AEIGSLSTVNATIGVNRCGH 82
EN A I +S ++ +G N GH
Sbjct: 463 ENNPPGASIAQVSASDSDLGPN--GH 486
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE A YTL A+V+D P + I + +TD+NDN P F S SI
Sbjct: 1135 QLSTTASLDREAQASYTLTAYVRDFGYPERYSSATIVVRVTDVNDNLPVFVKDEVSLSIP 1194
Query: 61 ENAEIGSLSTVNA 73
EN E ++ V A
Sbjct: 1195 ENTEQRAIHQVVA 1207
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE +TL V+D+ P + LI++ + DIND+AP F+ + I EN +
Sbjct: 1037 LDRETTPSFTLTIQVRDQGMPQRSAIKLISIHVLDINDHAPLFSQSSYTVDIQENLPPQS 1096
Query: 64 EIGSLSTVNATIGVN 78
+ + + IGVN
Sbjct: 1097 NVLQVQATDLDIGVN 1111
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+ + LDRE ++ Y L D P + + + + D NDN P+F+++ + +I EN
Sbjct: 1241 SCKSLDRETVSSYNLTIRASDHGSPQRNTMCRVFVKVLDKNDNYPQFSALEYAHTIKENV 1300
Query: 64 EIGSL 68
+G+
Sbjct: 1301 VVGTF 1305
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LD E++ Y L +D+ P +T+++ ++NDN+P F++ ++
Sbjct: 391 EITLLRSLDYEQVQLYKLYIEARDQGNPPRTSTLSLTISVLNVNDNSPVFSASSYVFNVS 450
Query: 61 ENAEIGS-LSTVNAT 74
E+A + S + V AT
Sbjct: 451 ESALVQSNIDQVQAT 465
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLIT--LTLTDINDNAPEFASVINSAS 58
+LK A LD E++ + +L +D+ + + IT L++ D+NDN P F +S S
Sbjct: 917 DLKVASVLDYEEVKQVSLVIQAKDQCHAGCQQKATITAWLSVLDVNDNTPVFKGN-SSYS 975
Query: 59 ILENAEIG 66
+ EN +G
Sbjct: 976 VFENETVG 983
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + + LD E A L+ + D P + + + +++TD+NDN+P+F + + E
Sbjct: 289 ISSTKSLDHETQAFVLLSIRAEAGDPPVF-ATAQVNISITDVNDNSPQFQTSSLQIPVWE 347
Query: 62 NAEIG-SLSTVNAT 74
+ ++ +L T +AT
Sbjct: 348 DEDLSTTLYTAHAT 361
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE IA+YTL D+ P + + + + D NDN P+F + S ++
Sbjct: 2799 EIYTTTRLDREDIAQYTLIVEAVDQGVPQLTGSATVLVNVLDKNDNPPKFTRLF-SVNVT 2857
Query: 61 ENAEIGS----LSTVNATIGVN 78
ENAEIG +++ ++ +GVN
Sbjct: 2858 ENAEIGQFVIKITSSDSDVGVN 2879
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE Y LN +DR P S I + + D NDN+P F SA+I E
Sbjct: 2160 LRVSGQLDREAKPSYELNVIAKDRGDPPRMTQSRIRINVLDENDNSPIFDPKQYSAAIAE 2219
Query: 62 NAEIG-SLSTVNAT 74
NA IG S+ V+AT
Sbjct: 2220 NASIGASVLQVSAT 2233
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD P+ + + D+NDNAP F + S I ENA
Sbjct: 1916 TAR-LDYEEVQHYILVVQAQDNGYPSLSSTLTVYCNVVDLNDNAPIFDPMSYSNEIFENA 1974
Query: 64 EIGS-LSTVNAT 74
I S + TV+AT
Sbjct: 1975 PINSDVVTVSAT 1986
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD + I Y LN +D ++++T+TLTDINDNAP F + A + EN+
Sbjct: 3231 LDYDLIQVYQLNITAEDLGYKPKRSIAMVTITLTDINDNAPYFNQSVYDAYVAENS 3286
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T R LDRE +A YTL +D P + +++ + D NDN+PE +
Sbjct: 611 QIATRRALDRELVAAYTLVVIARDHGSPPQSSSATVSVAVEDANDNSPELYPRAFFVPVA 670
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 671 EDAPEGTL 678
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ AR LDRE A Y L D Q + +T+ + D ND+APEF ++ +I
Sbjct: 1271 QITLARALDRETTASYRLTVVAHDASKQHRLSASTTVTIEVLDENDDAPEFTQTLSQIAI 1330
Query: 60 LENAEIGS 67
+E IG+
Sbjct: 1331 VETTPIGT 1338
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDRE Y L D P + + + DIND+ PEF A+I
Sbjct: 2376 EISLLRALDREMQEEYILTLVAMDTGSPPLTGTGTVRVMVQDINDHNPEFERQSYQATIA 2435
Query: 61 ENAEIGS 67
EN IG+
Sbjct: 2436 ENQPIGT 2442
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TAR LDRE + + L D P +++ +T+TDINDN P F ++L
Sbjct: 3540 QIETARKLDRETVPTHKLLLGAIDTGTPPQTGTTVVRITVTDINDNGPTFDPKDTIGAVL 3599
Query: 61 ENAE----IGSLSTVNATIGVNRCGHTFRGKDLRCYNLF 95
EN + +L+ + + N T++ R +LF
Sbjct: 3600 ENEPPNTVVMTLAATDPDLPPNGAPFTYQLVGGRHKSLF 3638
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+I +Y L DR P + + + + D+ND+ P F SA + E A G
Sbjct: 405 LDREEIGKYNLTVVAIDRGAPPRTATAHLIIHVNDVNDHEPVFEKSEYSAVLSELAPPGT 464
Query: 67 ---SLSTVNATIGVN 78
S++ + GVN
Sbjct: 465 YVASITATDEDTGVN 479
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E+ +Y + D D+P+ V + + +TD NDNAP + A +LE
Sbjct: 2702 GLDYERHQQYEVWIEAADSDRPSLRSVLQLIVNVTDANDNAPVMDRPMYVAEVLEEESPS 2761
Query: 67 SLST 70
L T
Sbjct: 2762 QLVT 2765
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSASILENAE 64
+DRE I Y L D+ P + +S L+T+ + D+NDNAP F S+ + + ++
Sbjct: 1494 IDREAIDTYRLTVLATDQAAPPAQRLSAEKLVTVIVEDVNDNAPVFVSMNAAILPVRDSA 1553
Query: 65 IGSLSTVNA 73
+G + ++A
Sbjct: 1554 MGEIMRIHA 1562
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L+T LDRE Y LN +D +PA + +T+ D+NDN P F
Sbjct: 174 LETTGKLDRESRGFYALNISARDGGEPARYGYLRVNVTILDVNDNPPIF 222
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW + +T+T+ D NDNAPEF
Sbjct: 2909 LDREQQDEYILKVAAVDG---AWRTETPLTITIQDQNDNAPEF 2948
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+KT LDRE + RY L V QP + + +T+ D+NDNAPEF + S
Sbjct: 62 EIKTNAVLDREALRADRYDL---VILSSQPTYPIE--VRITVLDVNDNAPEFPEPTIAVS 116
Query: 59 ILENAEIGS 67
E+A G+
Sbjct: 117 FSESAITGT 125
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENAE-- 64
LDRE+ Y L D +P S+ + + + D NDNAP+F + S+ EN
Sbjct: 1050 LDREERDYYALTIACADEGRPVSRSSSVPVIVHVIDENDNAPQFTNGTFVFSVAENEPPD 1109
Query: 65 --IGSLSTVNATIGVN 78
+G L+ ++ IG N
Sbjct: 1110 TFVGKLTAIDRDIGRN 1125
>gi|26335715|dbj|BAC31558.1| unnamed protein product [Mus musculus]
Length = 932
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V DR P + I+L + DINDN P F+ S SI E
Sbjct: 404 LLTTRALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYSTSISE 463
Query: 62 NAEIG 66
N G
Sbjct: 464 NNPRG 468
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + + L D P I++T+ D NDNAP F S+
Sbjct: 193 ELVLEQPLDREKESAHDLVLTALDGGNPVLSSTVHISVTVLDANDNAPLFTQSEYRVSVP 252
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G +L+ +A G+N + +FR ++ + F+
Sbjct: 253 ENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQ 293
>gi|363746929|ref|XP_427684.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Gallus gallus]
Length = 1369
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE + Y+ QD+ P + +++T+ D+NDN+PEF SA + E+A
Sbjct: 126 ASELDREAVDFYSFGVEAQDQGSPPMASSASVSVTVLDVNDNSPEFTQREYSARLNEDAA 185
Query: 65 IG-SLSTVNA 73
+G S+ TV+A
Sbjct: 186 VGTSVLTVSA 195
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E +TL QD +P +S L+T+ + D+NDNAP F S A++LEN +G
Sbjct: 23 LDYEANKEFTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPVG 82
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ D+ PA I +T+ D+NDN P F + E
Sbjct: 434 VRTLRRLDRENVPLYALRAYAVDKGVPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEE 493
Query: 62 NAEIG 66
N+ IG
Sbjct: 494 NSPIG 498
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + ++D+NDNAP+F S+ E
Sbjct: 328 VTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRDSYQGSVYE 387
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 388 DVPAFTSVLQVSATDRDSGLNGRVFYTFQ 416
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND++P F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; AltName:
Full=Multiple epidermal growth factor-like domains
protein 2; Short=Multiple EGF-like domains protein 2;
Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND++P F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|444511338|gb|ELV09857.1| Protocadherin-23, partial [Tupaia chinensis]
Length = 2686
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LD E A++ L +D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 994 LTTARALDYEVQAQHVLTVLARDSGSPARSSSQTLTVTVLDVNDEAPVFLQTLYEASVKE 1053
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1054 NQNPGQFVT 1062
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE + +TL D +P + + + D ND++P F ++ AS+ E
Sbjct: 1203 LSTARALDREHVGSFTLVIQGSDLGEPPRSSAMRVQVRVLDTNDHSPSFPTLHYLASLRE 1262
Query: 62 NA----EIGSLSTVNATIGVN 78
+A E+ +LS V+ G++
Sbjct: 1263 DAGAGTEVLALSAVDQDEGLS 1283
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P +++++ + D+ND+ PEF+S + A + E+ GS
Sbjct: 1945 LDREVAASHKLVVLASDGGCPPLSSTAVVSIRVLDVNDSPPEFSSPSHHAHVRESTPPGS 2004
Query: 68 LSTV 71
+TV
Sbjct: 2005 PTTV 2008
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE +TL V+D P+ + I T+ D ND+ P F + +L
Sbjct: 1098 EVVTAATLDREAQEAFTLRVLVRDGGVPSLSSTATILCTVDDENDHVPVFVVPRHDLEVL 1157
Query: 61 ENAE 64
EN E
Sbjct: 1158 ENQE 1161
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E ++ Y+L D+ P +L+ + +TD ND+AP F + I E+A IG
Sbjct: 1627 LDYESVSNYSLIVQATDKGMPRLSATTLVKIQVTDRNDHAPVFLPS-EAVEISESAAIGV 1685
Query: 68 LST 70
+ T
Sbjct: 1686 VVT 1688
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG---- 66
+KI+ D P V L+ + + D+ND+APEF + S+ E+ IG
Sbjct: 1832 DKISTVQFLVEACDGGLPELRAVMLVEIEIQDVNDHAPEFTATSYDLSVSEDTPIGRTLL 1891
Query: 67 SLSTVN 72
+LSTV+
Sbjct: 1892 TLSTVD 1897
>gi|443684188|gb|ELT88197.1| hypothetical protein CAPTEDRAFT_144547 [Capitella teleta]
Length = 654
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA+ LDRE IA+Y L +D + + + + D+NDN+P F SA+++
Sbjct: 299 QVLTAKVLDREMIAKYNLALICKDGGSDPLIAIQHLQVNIDDVNDNSPIFGQTSYSATLI 358
Query: 61 ENAEIGSLST-VNAT 74
EN+ IG+ T VNAT
Sbjct: 359 ENSYIGAFVTQVNAT 373
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R +D E+ + L + D P +L+ +++ D+ND P F + S SI EN
Sbjct: 407 RSMDHEEHENFQLYVNATDHGSPRRSSSALVVISIEDVNDETPTFTESLFSFSIEENKPS 466
Query: 66 G 66
G
Sbjct: 467 G 467
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LK+ LDREK + Y L D++QPA + + + D NDN P F
Sbjct: 509 LKSRTSLDREKQSVYHLAIIATDQNQPALSSSCSVVIYIMDENDNKPVF 557
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 36 ITLTLTDINDNAPEFASVINSASILENAEIGS 67
+ +T+TD+NDNAP FA S SI E+A + S
Sbjct: 8 VAVTITDLNDNAPTFAESSFSLSIKESASVNS 39
>gi|53748792|dbj|BAD52309.1| cadherin-related neuronal receptor variable 5 [Danio rerio]
Length = 938
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 409 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 468
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 469 VLHTVSAVDPDVGDN 483
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P S I + + D NDNAP F+ + AS++
Sbjct: 189 ELVLQKALDREKQPLVQLTLTAADGGNPPKSGTSQIIIRVLDNNDNAPVFSRPLYKASLV 248
Query: 61 ENAEIGS-LSTVNAT 74
EN IGS + +NAT
Sbjct: 249 ENVPIGSTVIIINAT 263
Score = 34.3 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
EK + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 307 EKNNAFEIRAQASDKGQPPMSTHCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 363
>gi|53748791|dbj|BAD52308.1| cadherin-related neuronal receptor variable 4 [Danio rerio]
Length = 936
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 407 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 466
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 467 VLHTVSAVDPDVGDN 481
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ S+I + + D NDN P F+ + S+
Sbjct: 187 ELVLQKALDREKKPVIQLTLTAVDGGTPSKTGTSIIIVKVLDNNDNTPVFSKPLYKTSVF 246
Query: 61 ENAEIG-SLSTVNAT 74
ENA IG +++ +NAT
Sbjct: 247 ENAAIGTTIAVLNAT 261
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 302 IDYEENNAFEIRAQASDKGQPPMSTHCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 361
>gi|53748808|dbj|BAD52321.1| cadherin-related neuronal receptor variable 4 [Danio rerio]
Length = 939
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ S+I + + D NDN P F+ + S+
Sbjct: 190 ELVLQKALDREKKPVIQLTLTAVDGGTPSKTGTSIIIVKVLDNNDNTPVFSKPLYKTSVF 249
Query: 61 ENAEIG-SLSTVNAT 74
ENA IG +++ +NAT
Sbjct: 250 ENAAIGTTIAVLNAT 264
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+ + + A D+ QP + + + DINDN PE +++ E+A IG+
Sbjct: 305 IDYEENNAFEIRAQASDKGQPPMSTHCKVLVEVLDINDNEPEITVTSLLSTVKEDASIGT 364
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1141 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1200
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1201 NSIVGSV 1207
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + R+ L QD P +++ +T+TD ND+AP F ++ E
Sbjct: 507 IRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRE 566
Query: 62 NAEIG 66
N E G
Sbjct: 567 NVEEG 571
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 836 LDRESVEHYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVG- 894
Query: 68 LSTVNATIGVNR 79
+TV + V+R
Sbjct: 895 -TTVVSVTAVDR 905
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 723 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 782
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 783 LENAPLGHSVIHIQAVDADHGEN 805
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos taurus]
Length = 3314
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1017 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1076
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1077 NSIVGSV 1083
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 383 IRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 442
Query: 62 NAEIG 66
N E G
Sbjct: 443 NVEEG 447
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 712 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDATVGT 771
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 772 -SVVSVT 777
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 599 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 658
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 659 LENAPLGHSVIHIQAVDADHGEN 681
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1019 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1078
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1079 NSIVGSV 1085
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + R+ L QD P +++ +T+TD ND+AP F ++ E
Sbjct: 385 IRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRE 444
Query: 62 NAEIG 66
N E G
Sbjct: 445 NVEEG 449
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 714 LDRESVEHYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVG- 772
Query: 68 LSTVNATIGVNR 79
+TV + V+R
Sbjct: 773 -TTVVSVTAVDR 783
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 601 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 660
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 661 LENAPLGHSVIHIQAVDADHGEN 683
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1014 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1073
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1074 NSIVGSV 1080
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 380 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 439
Query: 62 NAEIG 66
N E G
Sbjct: 440 NVEEG 444
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 709 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 768
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 769 -SVVSVT 774
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 596 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 655
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 656 LENAPLGHSVIHIQAVDADHGEN 678
>gi|26335563|dbj|BAC31482.1| unnamed protein product [Mus musculus]
Length = 796
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V DR P + I+L + DINDN P F+ S SI E
Sbjct: 404 LLTTRALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYSTSISE 463
Query: 62 NAEIG 66
N G
Sbjct: 464 NNPRG 468
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + + L D P I++T+ D NDNAP F S+
Sbjct: 193 ELVLEQPLDREKESAHDLVLTALDGGNPVLSSTVHISVTVLDANDNAPLFTQSEYRVSVP 252
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G +L+ +A G+N + +FR ++ + F+
Sbjct: 253 ENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQ 293
>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
Length = 3463
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|449475315|ref|XP_002186680.2| PREDICTED: protocadherin-1 [Taeniopygia guttata]
Length = 1193
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F + A + EN+ +G
Sbjct: 370 LDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVG 428
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ RY +D+ P+ + + + + + D NDN P+F + S++
Sbjct: 695 EIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVM 754
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 755 ENMPPLSPVGMVTVIDADKGEN 776
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + YT+ D P + + + + D+NDNAP F+ + E
Sbjct: 590 LQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPE 649
Query: 62 NAE----IGSLSTVNATIGVN 78
N E + +S +A G N
Sbjct: 650 NNEPDELVMEVSATDADSGSN 670
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 38 LTLTDINDNAPEFASVINSASILENAEIGSL 68
+ + DINDN P FAS + + SI EN +G+L
Sbjct: 288 IEVLDINDNTPNFASPVLTLSIPENTNVGTL 318
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|326670876|ref|XP_001341908.4| PREDICTED: protocadherin-8-like [Danio rerio]
Length = 1027
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREKIA Y L +D P V+ + LTD+NDNAP F++ I I EN
Sbjct: 475 TMAPLDREKIAEYNLTVVAEDFGVPPLRTVTQYIIRLTDVNDNAPAFSAKIYEGFIEENQ 534
Query: 64 EIGSLST 70
G+ T
Sbjct: 535 LPGTYIT 541
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 41.2 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
Length = 3575
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 966 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1025
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1026 SVIQVAASDPDVGLN 1040
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1066 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1125
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1126 NSPVGSV 1132
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 747 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 806
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 807 DQPPGTPVTTVTAT 820
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 641 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 700
Query: 61 ENAEIG 66
EN +G
Sbjct: 701 ENVPVG 706
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 852 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 909
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 910 DAPVGTTVLVVSATDSDVGVN 930
>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
Length = 3648
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1127 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPIFPAEEFEVRVKE 1186
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1187 NSIVGSV 1193
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 493 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 552
Query: 62 NAEIG 66
N E G
Sbjct: 553 NVEEG 557
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 822 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 881
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 882 -SVVSVT 887
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 709 EIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 768
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 769 LENAPLGHSVIHIQAVDADHGEN 791
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F + + + + E+A
Sbjct: 1027 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSLYTGLVSEDA 1082
>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
Length = 3300
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A Y L D P L+T+++ D+ND AP F S + E
Sbjct: 1599 LSVVRPLDREQRAEYLLTVVASDHGSPPRSATQLLTISVADVNDEAPTFQQQEYSVLLRE 1658
Query: 62 NAEIG-SLSTVNAT---IGVNRCGHTFRG 86
N+ G SL T+ AT +G N GH G
Sbjct: 1659 NSPPGVSLLTLRATDPDLGAN--GHVTYG 1685
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1804 EFGTMRPLDREVEPAFQLKIEARDGGQPALSATLLVTVTVLDANDHAPTFPEPAYSVEVP 1863
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1864 EDAPAGTL 1871
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + +T+ D+NDN+P F +A
Sbjct: 1160 EVTTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHITVLDLNDNSPTFLQASGAA 1216
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2558 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAVPEDTPVGA 2617
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F ++
Sbjct: 204 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHGTVS 263
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 264 ESLAPGS 270
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 425 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPTF 470
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + L + +D P + + + D ND+AP F S S + E
Sbjct: 1701 LTTLRALDREEQEKINLTVYARDGGSPPLLAHVTVRVAVDDENDHAPAFGSAHLSLEVPE 1760
Query: 62 NAEIGSLSTVNAT 74
+ +L+T+ A+
Sbjct: 1761 GQDPQTLATLRAS 1773
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSAS 58
+L+ AR LD E R+ L D PA +L +T+ + D+ND+ P F + S S
Sbjct: 2656 DLRLARPLDCETQTRHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTS 2712
Query: 59 ILENAEIGSLST 70
+ EN G+L T
Sbjct: 2713 LAENQPPGTLVT 2724
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + E
Sbjct: 99 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAVLQVPE 152
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T ++ + G TFR
Sbjct: 153 HTALGTRYPLEPARDADAGRLGTQGYSLSGDGAGETFR 190
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 8 LDREKIARYTLN--AHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD E+ RY L AH D P +L T+ + D+NDNAP F+ + A +LE+A
Sbjct: 2335 LDYEQRDRYHLQLLAH----DGPHQGHANL-TVLVEDVNDNAPTFSQSLYQAMLLEHAPP 2389
Query: 66 GS-LSTVNAT 74
GS + +V+AT
Sbjct: 2390 GSAILSVSAT 2399
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I + + D+NDNAP F + + E
Sbjct: 837 IRTVRKLDRESVPFYELTAYAVDRGMPPLRSPVRIQVAVQDVNDNAPVFPADEFEVYVKE 896
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 897 NSIVGSV 903
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E YTL QD +P I++ + D+ND+AP F S S+
Sbjct: 419 EVQIVTPLDFETEREYTLRVRAQDAGRPPLSNNTGTISIQVVDVNDHAPIFVSTPFQVSV 478
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + ++A G N
Sbjct: 479 LENAPLGHSIIHIQAIDADYGEN 501
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + +Y +D P+ + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 532 LDREMVEQYVFGVEARDHGNPSLSASAGVTITIMDVNDNRPEFTQREYFIRLNEDATVGT 591
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA-EIG 66
LD E YTL +D P + + + + D+NDNAP+FA+ + E+A
Sbjct: 737 LDYEDQVTYTLAVIAKDNGIPQKSDTTYVEIMVNDVNDNAPQFANTQYHGIVSEDAPPFT 796
Query: 67 SLSTVNAT 74
S+ ++AT
Sbjct: 797 SVVQISAT 804
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE + + D P +++ +T++D ND++P F SI E
Sbjct: 207 ISTIEILDRESMDLHYFRVSAIDHGTPRLSATTMVAITVSDRNDHSPLFEQSEYRESIRE 266
Query: 62 NAEIG 66
N E G
Sbjct: 267 NVEEG 271
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1059 IRTNKGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1118
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1119 NSPVGSV 1125
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 959 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPMFKNPLYQSSILEDALVGT 1018
Query: 68 ----LSTVNATIGVN 78
+S + IG+N
Sbjct: 1019 SVIQVSASDPDIGLN 1033
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ +R+T +D P S + +T+ D+NDN P F A++ E
Sbjct: 740 VQTIKQLDREEQSRFTFQVVAKDGGVPPKSASSSVVITVQDVNDNDPNFNPKYYEANVGE 799
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 800 DQPPGTPVTTVTAT 813
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 634 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 693
Query: 61 ENAEIG 66
EN +G
Sbjct: 694 ENVPVG 699
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAVQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVIGILDVNDNPPVFS 1243
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGKLVVTLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITERNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCTVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT +G N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLVGGNQLGH 3368
>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
Length = 3579
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
Length = 4376
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D +P + I + + D+NDN P F + S S+
Sbjct: 3404 ELQVAKALDWEQTSSYSLRLRATDSGRPPLHGDTDIAIQVVDVNDNPPRFFQLNYSTSVQ 3463
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3464 ENSPIGS 3470
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F ++ E
Sbjct: 797 LTVAAPLDYEATRFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQITVSE 856
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 857 NAEVGT 862
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2355 EMSTVQELDYETQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2414
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2415 ELATCGHL 2422
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1219 LSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVRILDVNDNPPVFS 1268
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK Y+L A D C + +TL + D+NDNAP F + ++
Sbjct: 3093 ELTTLTALDREKKDTYSLVAKATDGG--GQSCQADVTLYVEDVNDNAPSFFPSHCAVAVF 3150
Query: 61 ENAEI 65
+N +
Sbjct: 3151 DNTTV 3155
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LD E ++ L+ + + ++ I + +TD+N++ P F + + +LE
Sbjct: 3300 LYVNRNLDFETSPKFFLSVECSRKGSSSLSDMTTIVVNITDVNEHRPRFPQDLYTTRVLE 3359
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT +G N+ GH
Sbjct: 3360 NAAVGDVVLTVSATDEDGPVNSAITYSLVGGNQLGH 3395
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIGSLSTVNATI 75
L+ +++TD NDNAP FAS S++EN+E G L T+
Sbjct: 2918 LVEVSITDENDNAPRFASEDYRGSVVENSEPGELVATLKTL 2958
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
DRE+ Y + ++D P +L+ +++ D+NDN PEF I + E G
Sbjct: 2052 AFDREQQDTYAVAVELRDNRTPQRVAQALVRVSIEDVNDNHPEFKHAPYYTVIQDGTEPG 2111
Query: 67 S-LSTVNAT---IGVN 78
L V+AT +GVN
Sbjct: 2112 DVLCQVSATDQDLGVN 2127
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP V+ + +TL D NDN+P+ + ++S
Sbjct: 899 ELAVTGHLDRESEPQYILK--VEARDQPRKGHQLFSVTDLKITLEDANDNSPQCITELSS 956
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 957 LKVPEDLPPGTVLT 970
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T++ +D E + R YT D P E I+L L ++NDN P F V + SI
Sbjct: 538 ISTSKPMDYELMKRIYTFRVRASDWGSPFRQEKEVSISLRLKNLNDNKPMFEQVNCTGSI 597
Query: 60 LENAEIG-SLSTVNA 73
E+ +G SL TV+A
Sbjct: 598 HEDWPVGKSLMTVSA 612
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD+ ARY+L +D+ P W ++ + + + + +AP F+ I E+
Sbjct: 1640 AQKLDQANHARYSLTVKAEDQGSPQWHDLATVIINVYPSDSSAPIFSKAEYFVEIPESIP 1699
Query: 65 IGS 67
+GS
Sbjct: 1700 VGS 1702
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE ++ Y L DR V+ + + + D+NDN P + + S+ E
Sbjct: 1114 IQTLAPLDRESVSCYWLTVLAVDRGSIPLSSVTEVYIEVKDVNDNPPRMSRPVFYPSVRE 1173
Query: 62 NAEI 65
+A +
Sbjct: 1174 DAPL 1177
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 2 LKTARGLDREKIARYTLN--AHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
LK + +D E Y ++ AH D P VS + + + D+NDN P F + A +
Sbjct: 2775 LKVRKAMDYESTKWYQIDLMAHCPHNDTPLVSLVS-VNIQVKDVNDNRPIFEADPYKAVL 2833
Query: 60 LENAEIGS 67
EN +G+
Sbjct: 2834 TENMPVGT 2841
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ Y N V+ D C + I LT+ D+NDNAPEF++ + ++
Sbjct: 3078 ELKTLAPLDREEQEVY--NLLVKATDGGGRFCEANIVLTVEDVNDNAPEFSADPYTITVF 3135
Query: 61 ENAEIGS-LSTVNAT 74
EN E G+ L+ V AT
Sbjct: 3136 ENTEPGTPLTRVQAT 3150
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3392 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E ++ L V+D+D P + I + ++D ND+AP F S + E
Sbjct: 1514 LSTSETLDHEATHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P LI + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVSDLGIPQKAAWRLIDIRVLDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ EI S
Sbjct: 834 DKEINS 839
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E Y L D P+ V+ + + +TDINDN+P F+ +A I E+A
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDA 3349
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L + DR I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIIE 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++ + D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RALDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHAIH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTAR LDR Y L D+ P ++ + +++T ++ +P+F S S I E
Sbjct: 1619 IKTARELDRNSQVEYDLMVKATDQGNPPMSEIASVHVSVTIADNASPKFTSKEYSVEISE 1678
Query: 62 NAEIGSL 68
+GS
Sbjct: 1679 TIGVGSF 1685
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK RY + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ISTLKELDHEKRDRYQIQVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2929 EDDPPGGVIAILSTTDA 2945
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE A ++ + +D I + LTD NDNAP+F + I
Sbjct: 2547 QIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTINVILTDDNDNAPQFRATKYEVDIG 2606
Query: 61 ENAEIGS 67
NA G+
Sbjct: 2607 SNAPKGT 2613
>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
queenslandica]
Length = 7953
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LD E + Y+ NA V D +PA +L+ + ++DINDN+P F S + + S+L
Sbjct: 3525 EINLTSSLDYELVTSYSFNAIVTDGGEPALFSTALVIVNVSDINDNSPIFTSDVYNVSVL 3584
Query: 61 ENAEIGSL 68
E+ + S+
Sbjct: 3585 ESIKTSSV 3592
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE ++ YT N D P+ + + +T+ D+NDN+P V + SI EN +
Sbjct: 3631 ASSLDRESVSEYTFNVVATDGGHPSRNSTAQVIVTVQDVNDNSPVIDLVYLNDSIPENTQ 3690
Query: 65 IGSLSTV----NATIGVN 78
IG++ + +A IG N
Sbjct: 3691 IGTVVAIFNVTDADIGPN 3708
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA L+RE+ YTL D + + +++ DINDN P F++ SAS+LE
Sbjct: 4968 IRTASELNREEQQSYTLTVLATDAGDIPLTGSATVDVSVLDINDNTPSFSATEYSASVLE 5027
Query: 62 NAEIGSLSTVNAT 74
N + TVNAT
Sbjct: 5028 NIPNVYIVTVNAT 5040
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD EK + QD P+ + +T+ + D NDNAP F+ + A++ E+A G
Sbjct: 6166 ALDYEKEQMFDFIVTCQDSGTPSRQSNVPVTINVADANDNAPVFSQDMYPATVPEDASFG 6225
Query: 67 S 67
S
Sbjct: 6226 S 6226
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + + D P+ + + +++ D+NDN+P F S SI EN +
Sbjct: 5076 LDRETTSSQVFVVYAADGGNPSRTSSAAVNVSVIDVNDNSPMFIGDPYSGSIPENEAGYN 5135
Query: 68 LSTVNAT 74
+ TV AT
Sbjct: 5136 ILTVEAT 5142
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LD E I Y L + + + ++ + +T+ + D+NDNAP F S + SI
Sbjct: 3322 KLIVASSLDYEGIQSYNLVVMLTNGNLTSY---ANVTVNVLDVNDNAPIFTSP-SEVSIP 3377
Query: 61 ENAEIGSL 68
E+A IGSL
Sbjct: 3378 EDAPIGSL 3385
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN- 62
TA LDRE I Y + D +L+T+ + + NDN+P F + SI E+
Sbjct: 4769 TAVSLDREDIDMYNITVAATDSGPDPNTATALVTVEVLNENDNSPYFPQSVYHLSIPEDT 4828
Query: 63 ---AEIGSLSTVNATI 75
EI +S ++ I
Sbjct: 4829 PTYTEIDVVSAIDPDI 4844
>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
Length = 3575
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
>gi|395504760|ref|XP_003756715.1| PREDICTED: protocadherin gamma-A2-like [Sarcophilus harrisii]
Length = 1061
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D +P + I +T+ D+NDNAP F+ + + S+
Sbjct: 430 ELVLERALDREEEAVHHLMLTAWDGGEPLRSGTARIRVTVLDVNDNAPVFSQSVYTVSVP 489
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ L TVNAT
Sbjct: 490 ENVSQGTILLTVNAT 504
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + +D PA + I L + DINDN P F+ SA I E
Sbjct: 641 LVTDRALDREQVSVYNITVRAKDFGSPALSTDTHILLQVADINDNPPTFSQSTYSAYIQE 700
Query: 62 NAEIGS 67
N G+
Sbjct: 701 NNPRGA 706
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T + LD E Y + V+ +D + + I +T+ D+NDNAPE + SI
Sbjct: 537 ELSTLQNLDYEDAEFYMM--EVEAQDGLGFWSRAKIHVTVLDVNDNAPEVTITSVTNSIS 594
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 595 ENAPPGTV 602
>gi|332207901|ref|XP_003253033.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Nomascus
leucogenys]
Length = 4557
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+I Y+L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDRERIPMYSLMAKATDGG--GRFCQSNIHLILEDVNDNPPVFSSDHYNACVH 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ IG+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDIGINR 3164
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E R+ L +D PA V+ + + LTD+NDN P+F+ + SA I
Sbjct: 3292 DISVSEVLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVIS 3351
Query: 61 ENAEIG 66
E+A +G
Sbjct: 3352 EDALVG 3357
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSGIGT 848
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN+P F +I + + E A
Sbjct: 2348 TARMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNSPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETIL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA ++
Sbjct: 2875 ISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEAYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|326673325|ref|XP_003199840.1| PREDICTED: protocadherin alpha-3-like [Danio rerio]
Length = 813
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 412 LDRERASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 471
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 472 VLHTVSAVDPDVGDN 486
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P S I + + DINDNAP F+ + AS++
Sbjct: 192 ELVLQKALDREKQPLVQLTLTAADGGNPPKSGTSQIIIRVLDINDNAPVFSRPLYKASLV 251
Query: 61 ENAEIGS-LSTVNAT 74
EN IGS + +NAT
Sbjct: 252 ENVPIGSTVIIINAT 266
>gi|312378848|gb|EFR25304.1| hypothetical protein AND_09493 [Anopheles darlingi]
Length = 3184
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE I Y L+A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1314 IRTNKGLDRESIPVYHLSAIASDKGTPTMSSTVEVQIRLDDVNDSPPTFASDKLTLYVPE 1373
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1374 NSPVGSV 1380
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE A Y L +D P+ + + + +TD+NDNAP F + A+I E+A IG
Sbjct: 1214 LDRETTAGYLLTVTAKDGGNPSLSDTTDVEIAVTDVNDNAPVFKVPLYQATIPEDALIGT 1273
Query: 67 SLSTVNAT---IGVN-RCGHTFRGKDL 89
S+ + AT +G+N R + KD+
Sbjct: 1274 SVVQIGATDLDMGLNGRVKYALSQKDM 1300
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T +GLDRE+ +RY+ D P + + +T+ D+NDN P F+ A + E
Sbjct: 995 IHTTKGLDREEQSRYSFQVVAVDGGIPPKSASTSVIVTIQDVNDNDPTFSPKYYEAMLAE 1054
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 1055 DQPPGTPVTTVTAT 1068
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + ++L
Sbjct: 889 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVL 948
Query: 61 ENAEIG 66
E+ +G
Sbjct: 949 ESVPVG 954
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L D Q +++ + +TD N+ AP F + SAS+ E
Sbjct: 1100 ITIAQPLDYKQERRFALTITATDSGQRT--DTAIVNINITDANNFAPVFENAPYSASVFE 1157
Query: 62 NAEIGS----LSTVNATIGVN 78
+A IG+ +S ++ +G+N
Sbjct: 1158 DAPIGTTVLVVSATDSDVGIN 1178
>gi|134024226|gb|AAI36127.1| LOC100125046 protein [Xenopus (Silurana) tropicalis]
Length = 923
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+I + + D +P + + +T+ D+NDNAP F I AS+L
Sbjct: 193 QLVLKKSLDREQIPFHNITLIAFDGGKPKLNGSAQLLITVQDVNDNAPVFEQSIYRASLL 252
Query: 61 ENAEIGSLS-TVNAT 74
ENA +G+ VNAT
Sbjct: 253 ENALVGTFVIKVNAT 267
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y L+ D PA I + ++D+NDN P F S+ EN GS
Sbjct: 413 LDRERTSEYELDITATDGGAPALSVTKSIKVQISDVNDNPPSFQKSSEIISVKENNPPGS 472
Query: 68 -LSTVNAT 74
+ TV+A+
Sbjct: 473 HVYTVSAS 480
>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
Length = 3574
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan; AltName:
Full=Protein flamingo; AltName: Full=Protein starry
night; Flags: Precursor
gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
Length = 3579
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K A+ LDREKI+ YTL D P + + + ++D+NDN P F+ S I
Sbjct: 3390 EVKVAKLLDREKISGYTLTVQASDNGNPPGINTTTVNIDVSDVNDNPPVFSKGNYSIIIQ 3449
Query: 61 ENAEIG 66
EN +G
Sbjct: 3450 ENKPVG 3455
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+ + YT V+ D C + I L + D+NDN PEF + + ++
Sbjct: 3079 ELKTLAALDREQKSVYTF--MVKASDGGGRFCQANIILNIEDVNDNIPEFTTDPYTITVF 3136
Query: 61 ENAEIGSLST-VNAT 74
EN E +L T V AT
Sbjct: 3137 ENTEPKTLLTRVQAT 3151
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E I ++ L V+D+D P + + + ++D ND+AP F S + E
Sbjct: 1515 LYTSEKLDHEVIHQHVLTVMVRDQDVPVKRNFARVIINVSDTNDHAPWFTSSSYKGRVFE 1574
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1575 SAAVGSM 1581
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI- 65
GLD E Y L D P+ V + + +TDINDN P F+ +A I E+AE+
Sbjct: 3291 GLDYESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAEVE 3350
Query: 66 GSLSTVNA 73
S+ TV A
Sbjct: 3351 QSVVTVMA 3358
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
+R LD E+ ++TL D P ++T+ +TD+NDN P F ++ A+I E A
Sbjct: 2346 SRSLDYEQSRQHTLLVRAIDSGMPPLSSDVVVTVGITDLNDNPPVFNQLLYEANISELAP 2405
Query: 65 IGSLST 70
G T
Sbjct: 2406 RGHFVT 2411
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 775 LKILSPLDREVKDKYTLNFTVYDLGIPQKSAWRLLDIRVLDANDNHPEFLQDSYFVDVSE 834
Query: 62 N----AEIGSLSTVNATIGVN 78
N EI + ++ +G N
Sbjct: 835 NKDLDTEIIQVEAIDRDLGTN 855
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +Y + DR ++ +++ +++TD+NDN P F + I ++
Sbjct: 2870 ITTLKELDHEKQNKYKITVVASDRGEKVQLTSTAVVEVSVTDVNDNPPRFTAEIYKGTVS 2929
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 2930 EDDPTGGVVAILST 2943
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE + + V QP+ ++ +T+ DINDNAP F S+ A++ +
Sbjct: 2036 TGMPFDRELQDSFDIVVEVTAEHQPSLIAHVVVKVTVEDINDNAPVFVSLPYYATVKIDM 2095
Query: 64 EIGS----LSTVNATIGVN 78
E+G ++ V+ IG N
Sbjct: 2096 EVGQVIRRVTAVDKDIGRN 2114
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSAS 58
++ +GLD E+ Y L +D+ +P + + + + D+N+N P F + ++
Sbjct: 984 IRIVQGLDFERKQMYNLTVRAKDKGKPISMSSTCYVEIEVVDVNENLHPPRFPNFVDKGF 1043
Query: 59 ILENAEIGSL-STVNA 73
+ E+ IGSL TV+A
Sbjct: 1044 VNEDVPIGSLVMTVSA 1059
>gi|297676245|ref|XP_002816053.1| PREDICTED: protocadherin gamma-A1 [Pongo abelii]
Length = 823
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITVTATDQGTPALSTEAHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAY 504
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus
griseus]
Length = 3288
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 985 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1044
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1045 NSIVGSV 1051
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 351 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRE 410
Query: 62 NAEIG 66
N E G
Sbjct: 411 NVEEG 415
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 680 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 739
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 740 -SVVSVT 745
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 567 EIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 626
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 627 LENAPLGHSVIHIQAVDADHGEN 649
>gi|348544967|ref|XP_003459952.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1540
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE A Y+L +D+ +PA + +T+ ++DINDN P+F+ ILE
Sbjct: 672 AGALDRETKAEYSLLVVAEDQGRPARSATATLTVQVSDINDNTPKFSVAEYQVEILETES 731
Query: 65 IG-SLSTVNA 73
+G SL T++A
Sbjct: 732 VGASLLTLSA 741
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI-LENAEIG 66
LDRE Y L D+ P E + I ++L D+NDN P F+S ++I L++AE G
Sbjct: 990 LDRENRETYDLTVKALDKGNPPRENFTSIRVSLADLNDNKPVFSSSDYVSTILLKDAEEG 1049
Query: 67 S-LSTVNAT 74
L T++AT
Sbjct: 1050 KLLLTLSAT 1058
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 34 SLITLTLTDINDNAPEFASVINSASILENAEIG-SLSTVNAT 74
+++ + +TDINDN+P F+S + S+LE+AE+G +++ V AT
Sbjct: 598 AVVEIQVTDINDNSPVFSSSSVTKSVLEDAEVGFNVTAVPAT 639
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE Y L D+ + + T+ D NDN+P+F S+ + I+E
Sbjct: 879 LRRDVALDRETKDSYLLQVVAVDQVTNGLSSTAELNFTILDYNDNSPQFPSIPDPLMIIE 938
Query: 62 N-------AEIGSLSTVNATIGVN 78
EI +++ +A +G+N
Sbjct: 939 GNYSKESPGEIFTITPTDADLGLN 962
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 940 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 999
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1000 NSIVGSV 1006
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 306 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRE 365
Query: 62 NAEIG 66
N E G
Sbjct: 366 NVEEG 370
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 635 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 694
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 695 -SVVSVT 700
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 522 EIQVVAPLDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 581
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 582 LENAPLGHSVIHIQAVDADHGEN 604
>gi|443728421|gb|ELU14777.1| hypothetical protein CAPTEDRAFT_226654 [Capitella teleta]
Length = 2555
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE Y + +D+ P +++T+ +TD+ND+ P+F I A++ EN + G
Sbjct: 1143 LDRETEEEYNIIVQAKDKGSPPMSSSAVVTIVITDVNDHPPKFTQPIYKATMSENYKAGA 1202
Query: 67 SLSTVNAT 74
S+++V+AT
Sbjct: 1203 SITSVSAT 1210
>gi|301753517|ref|XP_002912645.1| PREDICTED: protocadherin gamma-A1-like [Ailuropoda melanoleuca]
Length = 811
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE +RY + D+ PA + I+L +TDINDN P F S ILE
Sbjct: 404 LVTERTLDRELTSRYNITVTATDQGIPALSTETHISLQVTDINDNPPVFPQDSYSTFILE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D P LI + + D NDN P F SI EN +G+
Sbjct: 200 LDREEEAVHHLLLTASDGGNPVRSGTLLIHVQVVDANDNPPAFTQAQYHMSIPENVPLGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
L TV AT GVN ++F D + +F+
Sbjct: 260 RLLTVKATDPDEGVNGEVTYSFHNIDHKIAQIFQ 293
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1016 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1075
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1076 NSIVGSV 1082
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 382 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 441
Query: 62 NAEIG 66
N E G
Sbjct: 442 NVEEG 446
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 711 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 770
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 771 -SVVSVT 776
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 598 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 657
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 658 LENAPLGHSVIHIQAVDADHGEN 680
>gi|410913729|ref|XP_003970341.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 797
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE ++ Y++ D P +++++ ++D+NDN P F+ + +A I EN ++
Sbjct: 408 RALDRETVSAYSVTIVASDGGTPFLTSSAVLSILISDVNDNPPLFSEPLINAYIGENMQV 467
Query: 66 GS-LSTVNAT-IGVNRCGH 82
G+ + TV AT + + + GH
Sbjct: 468 GAIIKTVTATDVDIEQNGH 486
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A + D P S + + + DINDN P F+ + I
Sbjct: 190 ELVLQKALDREKQAVIRMTLTALDGGSPPKTGTSQLIINVLDINDNIPLFSQALYKTKIP 249
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDL-RCYNLFK 96
EN +G+ + TVNAT G+N ++ R KD R ++F+
Sbjct: 250 ENTSLGTRVITVNATDADEGLNGEILYSLRSKDQDRVLDIFE 291
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 4 TARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T +G +D E + + D+ QP + + + D+NDNAPE +S+ E+
Sbjct: 300 TVKGNIDFEDKRAFEIRVEASDKGQPPMSAHCKVLVEVLDVNDNAPELTVTSLHSSVRED 359
Query: 63 AEIG 66
A +G
Sbjct: 360 ANVG 363
>gi|410906919|ref|XP_003966939.1| PREDICTED: protocadherin-7-like [Takifugu rubripes]
Length = 1254
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L V+D P +++ + +TD+NDN+P F + A + EN+ G
Sbjct: 232 ALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPG 291
Query: 67 S----LSTVNATIGVN 78
S L +A +GVN
Sbjct: 292 SPILQLKATDADVGVN 307
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE RY +D+ + + + + ++D NDN P+F + + + EN E
Sbjct: 564 LDREHTERYEFKVIAKDKGVNTLQGSATVVVLVSDKNDNEPKFMQDVFTFYVKENLEPNS 623
Query: 65 -IGSLSTVNATIGVN 78
+G ++ ++A G N
Sbjct: 624 PVGMVTVIDADKGHN 638
>gi|327270481|ref|XP_003220018.1| PREDICTED: protocadherin alpha-3-like [Anolis carolinensis]
Length = 794
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LDRE++A Y L QD P+ S + + + DINDN P FA + + E
Sbjct: 408 LVVAEALDREQVAEYKLVVTTQDHGTPSLSATSNLEVPIGDINDNTPTFAQTTYTVFVKE 467
Query: 62 NAEIGS-LSTVNAT 74
N G+ + TV+A+
Sbjct: 468 NNPPGAHIFTVSAS 481
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T LD E+ +Y + D+ I + + D+NDNAPE + S +
Sbjct: 301 EIRTKEKLDYEETRQYEIQVQASDKGSNPMTGYCSIVIEVLDVNDNAPEMSLKSLSVPVP 360
Query: 61 ENAEIGSLSTVNATIGVN 78
E+++ G TV A I V+
Sbjct: 361 EDSQPG---TVVALISVS 375
>gi|432902021|ref|XP_004076995.1| PREDICTED: cadherin-5-like [Oryzias latipes]
Length = 760
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDREK A Y L A + D+D E + +TDINDN+P F+ N I+
Sbjct: 86 DLFVTTSLDREKKASYNLTARMYDKDNNLVEDAGHFVIHVTDINDNSPVFSQTFN-GYIM 144
Query: 61 ENAEIGSLST-VNAT 74
E ++IG+ T V AT
Sbjct: 145 ERSKIGTFVTKVTAT 159
>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
Length = 2652
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 654 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPIEVTVTVLDVNDNPPVFKQDEFDVFVEE 713
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 714 NSPIGLAVARVTAT 727
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASIL 60
L LD E YTL QD +P VS L+T+ + DINDNAP F S A++L
Sbjct: 237 LDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVL 296
Query: 61 ENAEIGSL----STVNATIGVN 78
E+ +G L ++A G N
Sbjct: 297 ESVPLGYLVLHVQAIDADAGEN 318
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 343 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 402
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 403 DAAVGTSVVTVSA---VDRDAHS 422
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + VQD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 22 VTTAEELDRETKSTHVFRVTVQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 81
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 82 NLEVGYEVLTVRATDG 97
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 548 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 607
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFRG 86
+ + +S + G+N R +TF+G
Sbjct: 608 DVPPFTSVLQISATDRDSGLNGRVFYTFQG 637
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+
Sbjct: 130 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFS 181
>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
Length = 3578
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
>gi|358335734|dbj|GAA54365.1| protocadherin-7 [Clonorchis sinensis]
Length = 925
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDREK +RY + DR P CVS + + + DINDNAP+F
Sbjct: 414 LDREKQSRYAFKVYAADRGIPKLSCVSAVIVRVLDINDNAPKF 456
>gi|26327979|dbj|BAC27730.1| unnamed protein product [Mus musculus]
Length = 796
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 193 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 252
Query: 61 ENAEIGSLS-TVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSPVGSLVLTVSA 266
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 403 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 300 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 357
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 358 EN----SPETIVAIFGIS 371
>gi|37589448|gb|AAH59821.1| Protocadherin beta 14 [Mus musculus]
Length = 796
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 193 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 252
Query: 61 ENAEIGSLS-TVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSPVGSLVLTVSA 266
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 403 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 300 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 357
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 358 EN----SPETIVAIFGIS 371
>gi|148613871|ref|NP_444369.3| protocadherin beta-14 precursor [Mus musculus]
gi|122064669|sp|Q6PB90.2|PCDBE_MOUSE RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
gi|13876288|gb|AAK26064.1| protocadherin beta 14 [Mus musculus]
Length = 796
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 193 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 252
Query: 61 ENAEIGSLS-TVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSPVGSLVLTVSA 266
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 403 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 300 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 357
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 358 EN----SPETIVAIFGIS 371
>gi|410948363|ref|XP_003980910.1| PREDICTED: protocadherin gamma-C5 [Felis catus]
Length = 944
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGIPARSGTTLISVIVLDINDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPMGTLLLRLNAT 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F+ + +A I E
Sbjct: 406 LLTSQPLDRETTSHYVIELLASDAGSPPLHAHLTIRLNISDVNDNAPYFSQQLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N ILE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCMIQVDVEDANDNAPEVLLASLVN--PILESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|334311097|ref|XP_001377944.2| PREDICTED: protocadherin gamma-A12 [Monodelphis domestica]
Length = 894
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE+++ Y + D P + ITL + DINDN P F+ S ILE
Sbjct: 403 LVTSMALDREQVSMYNITVTATDLGTPPISTNTHITLHVADINDNPPTFSQTSYSVYILE 462
Query: 62 NAEIGSL----------STVNATIGVNRCGHTFRGKDLRCY 92
N GS S NA I + F+G L Y
Sbjct: 463 NNPKGSSIFLVTASDPDSEENAQIIYTIADNIFQGVPLSSY 503
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P S + +T+ D NDNAP F + S SI
Sbjct: 192 ELVLERALDREEEPVHHLILTASDGGNPVRSGTSRVRVTVLDANDNAPVFTQSVYSVSIP 251
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L +VNAT
Sbjct: 252 ENVPVGTWLLSVNAT 266
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T L+ E+ Y + VQ +D + + + +T+ D+NDNAPE + SILE
Sbjct: 300 ISTIGHLNHEESGFYEM--EVQAKDNAGFFARANVLVTVVDVNDNAPEVTITSLTNSILE 357
Query: 62 NAEIGSL 68
N+ G++
Sbjct: 358 NSPAGTV 364
>gi|327270405|ref|XP_003219980.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 1545
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+I+ Y + DR P I+L ++DINDNAP F S E
Sbjct: 1100 LVTERPLDREEISEYNITITATDRGTPPLSTQKTISLEISDINDNAPAFEKSSYSIFTPE 1159
Query: 62 NAEIGS-LSTVNAT---IGVN 78
N G+ L T+ A+ +G+N
Sbjct: 1160 NNPAGTALFTIKASDPDVGLN 1180
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE Y + D+ P I++ ++DINDN P F A IL
Sbjct: 318 KLLTDGQLDRESAPEYNITITATDKGTPPLSTYKTISIMISDINDNPPAFEKSSYIAYIL 377
Query: 61 ENAEIG 66
EN G
Sbjct: 378 ENNPAG 383
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P I + +TDINDNAP F+ + S+
Sbjct: 196 ELILHKQLDREKEHTHNLVLIAMDGGVPRKTGTLNIRVNVTDINDNAPVFSQAMYKVSLK 255
Query: 61 ENAEIG 66
EN IG
Sbjct: 256 ENVPIG 261
>gi|410956743|ref|XP_003984998.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Felis catus]
Length = 2968
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T R LDRE+++ +TL D P + + + + D ND+ P F ++ AS+
Sbjct: 1483 DLSTTRALDREQVSNFTLVILCSDLGDPPRSSLVQLQVRVLDDNDHGPSFPTLHYQASVR 1542
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1543 EDAEVGTVVLVLSAVDKDEGLN 1564
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE A + L D P +++++ + D+NDN P+F+S+ A + E+ +
Sbjct: 2220 RSLDREVAASHNLVIVASDHGCPPLSSTAIVSIEVLDVNDNPPKFSSLKYHAHVKESTPL 2279
Query: 66 GSLSTV 71
GS TV
Sbjct: 2280 GSHITV 2285
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APE +S +L
Sbjct: 1379 EVVTTTTLDREVQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEIIVPSHSIEVL 1438
Query: 61 ENAEIGSLSTVNAT 74
EN E G T+ A+
Sbjct: 1439 ENQEPGVAYTILAS 1452
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y+L D+ P+ S+IT+ +TD NDNAP F + I EN+ G
Sbjct: 1904 LDYEFTNSYSLIVQATDKGMPSLSGTSVITIQVTDTNDNAPAFLPS-GAVEIAENSLPGV 1962
Query: 68 LST 70
+ T
Sbjct: 1963 IVT 1965
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D P +T+T+ D+ND AP F + AS+ E
Sbjct: 1275 LTTTCPLDYEIKTQHILTLLALDDGIPVLSSSQTLTITVLDVNDEAPVFQQNLYEASVKE 1334
Query: 62 NAEIGSL 68
N G
Sbjct: 1335 NQNPGEF 1341
>gi|441596385|ref|XP_004093139.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Nomascus
leucogenys]
Length = 879
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGIPAHSGTTLISVIVLDINDNAPTFQYSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPPLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESSFYEIHARACDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|410306228|gb|JAA31714.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
gi|410352063|gb|JAA42635.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 927
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|410266136|gb|JAA21034.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|351714140|gb|EHB17059.1| Cadherin-1 [Heterocephalus glaber]
Length = 894
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LDREKIA YTL +H + A E I +T+TD NDN P+F + S++E
Sbjct: 227 LMVTEPLDREKIANYTLFSHAVSSNGNAVEDPMEIVITVTDQNDNRPQFIKEVFEGSVME 286
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 287 GALPGTSVMQVSAT 300
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TD+NDN P F + EN
Sbjct: 344 GLDRESYPTYTLEVQAADLQGEGLSTTAKAVITVTDVNDNPPIFNPTTYEGQVPENEPEA 403
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 404 VITTLTVT 411
>gi|348572524|ref|XP_003472042.1| PREDICTED: cadherin-1-like [Cavia porcellus]
Length = 884
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L LDREKIA YTL +H + A E I +T+TD NDN P+F + S++E
Sbjct: 217 LMVTEPLDREKIANYTLLSHAVSSNGNAVEDPMEIVITVTDQNDNRPQFIKEVFEGSVME 276
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 277 GALPGTSVMQVSAT 290
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D ++ +T+TD+NDN P F + + EN
Sbjct: 334 GLDRESYPTYTLVVQAADLQGEGLSAIAKAVITVTDVNDNPPIFNPTMYEGQVPENEADA 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 IITTLKVT 401
>gi|332234759|ref|XP_003266571.1| PREDICTED: protocadherin gamma-B7 [Nomascus leucogenys]
Length = 807
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C +I + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCKVII--EVLDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PSG 363
>gi|301613494|ref|XP_002936245.1| PREDICTED: protocadherin-11 X-linked-like [Xenopus (Silurana)
tropicalis]
Length = 1008
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ Y + V+D PA +++ +T+TD+NDN P F +I
Sbjct: 198 QLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIP 257
Query: 61 ENAEIGS----LSTVNATIGVNRCGHTFRGKDL 89
E+A +G+ L +A +G N H + G +
Sbjct: 258 EDAAVGTSVTQLHATDADLGSNAKIHFYFGNQI 290
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L R LDREK RYT +D P+ + + +TL++ D NDN+P F
Sbjct: 520 LTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSF 568
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+TA LD E Y + D +P +++ + + D NDNAP F + S +E
Sbjct: 416 LETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVE 475
Query: 62 NAEIGS-LSTVNAT 74
N G+ L+ ++AT
Sbjct: 476 NNPPGTELTKISAT 489
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 36 ITLTLTDINDNAPEFASVINSASILENAEIGS----LSTVNATIGVNRCGH 82
I + DINDN+P F S + + SI EN + S S ++ +GVN H
Sbjct: 123 IRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQH 173
>gi|444709345|gb|ELW50366.1| Cadherin-1, partial [Tupaia chinensis]
Length = 874
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE I +YTL +H + A E I +T+TD NDN PEF ++ S+
Sbjct: 205 QLMVTQPLDRENIPKYTLFSHAVSSNGNAVEEPMEIVITVTDQNDNKPEFTKMVFEGSVA 264
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ V AT
Sbjct: 265 EGALPGTSVMQVTAT 279
>gi|410266134|gb|JAA21033.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 929
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|119514182|gb|ABL75845.1| protocadherin 2A5 [Takifugu rubripes]
Length = 1031
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 484 ELMVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 543
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 544 ENNAPGAL 551
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 271 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 330
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 331 ENSPIGSLVIKLNAT 345
>gi|395817389|ref|XP_003782154.1| PREDICTED: protocadherin gamma-A5 [Otolemur garnettii]
Length = 814
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ + Y + V D P I+L +TD+NDN P F+ S S+LE
Sbjct: 404 LLTTKTLDREETSDYNITITVIDHGTPPLSTEDCISLKVTDVNDNPPAFSHASYSTSLLE 463
Query: 62 NAEIG----SL------STVNATIGVNRCGHTFRGKDLRCY 92
N G SL S NA + + TF+G L Y
Sbjct: 464 NNPRGISIFSLTAHDPDSGENAQVTYSLVKDTFQGVPLSSY 504
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A + L D P + I + + D NDNAP F S+
Sbjct: 193 ELVLKQPLDREKEAVHNLLITALDGGDPVLSGTTHIHVMVLDANDNAPLFTQSEYKVSVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN IG+ L T+ AT G+N + ++F +D + F+
Sbjct: 253 ENIPIGTQLLTLTATDPDEGINGKLTYSFHNEDDKILETFQ 293
>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2413
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ V D P + +TL D+NDN P F + A++ E
Sbjct: 618 LSTAVELDREEQASYLLHVQVTDGGSPPLRSAGKVNVTLRDVNDNRPVFYPLQYFANVKE 677
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 678 NEPSGSYVTTVSAT 691
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE Y L V+D+ +P + +T+ DINDN P F + AS+LE
Sbjct: 187 LVSTGGLDREVTPFYQLLIEVEDKGEPKTFGYLQVNVTIQDINDNPPSFERDLYQASVLE 246
Query: 62 NAEIGS 67
+A +GS
Sbjct: 247 DAAVGS 252
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I+ YTL D+ +P +T+ + D+NDN P F+ I I EN G+
Sbjct: 2180 LDREEISNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGT 2239
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILE 61
GLD E Y+L H D P+ + T+ L D+NDN P F + AS+ E
Sbjct: 294 GLDYESRREYSLTIHAVDNGVPSLSGRAEATIKLLDVNDNDPVVKFRYFPTTSKFASVDE 353
Query: 62 NAEIGSL 68
NA++G++
Sbjct: 354 NAQVGTV 360
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K A LDRE+I+ Y L V D +P A + + + + DIND+ P F I
Sbjct: 404 IKVASVLDRERISSYNLTVSVSDNGKPVARSSFASLVIFVNDINDHPPIFQETEYRVDIS 463
Query: 61 ENAEIGS-LSTVNATIG 76
E+ GS + V+AT G
Sbjct: 464 EDIPKGSYIKGVSATDG 480
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++Y+L D Q + + +T+ DIND++P+F+ S I
Sbjct: 1863 DLIATKKLDRERRSKYSLLVRADDGKQSS---DMRLNITVKDINDHSPKFSRATYSFDIP 1919
Query: 61 ENAEIGSL 68
E+ GS+
Sbjct: 1920 EDTTAGSI 1927
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D ++++++ D NDN+P F S +LEN IG
Sbjct: 1249 LDYETTSSYSLKIIAVDGGAEPLSSSCMLSISVLDENDNSPSFPKSSVSVDVLENMRIGE 1308
Query: 68 L-STVNAT 74
L ++V AT
Sbjct: 1309 LVASVTAT 1316
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ +A LDRE + LN +D+ QP LI + +TD+ND P F S+
Sbjct: 510 VTSAALLDREATSEVVLNISAKDQGLQPRISYTKLI-INITDVNDQVPTFTQSTFHVSLA 568
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A G+ LS + +G N
Sbjct: 569 EHAPAGTQLLVLSATDGDLGPN 590
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ AR LDRE + Y+L DR + + + L D+ND AP F + + E
Sbjct: 2277 ISVARQLDREARSSYSLLVQATDRGSSPRMDQATVNIVLLDVNDCAPVFELSPYTVRVQE 2336
Query: 62 NAE 64
N E
Sbjct: 2337 NLE 2339
>gi|127138695|ref|NP_001076039.1| protocadherin gamma-B7 precursor [Pan troglodytes]
gi|62510858|sp|Q5DRA5.1|PCDGJ_PANTR RecName: Full=Protocadherin gamma-B7; Short=PCDH-gamma-B7; Flags:
Precursor
gi|410352059|gb|JAA42633.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 929
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|297295289|ref|XP_002804604.1| PREDICTED: protocadherin beta-6 isoform 2 [Macaca mulatta]
Length = 794
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R TL D P S I + + DINDN PEFA + A I
Sbjct: 192 ELVLDKPLDREEQPRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEFAQELYEAQIP 251
Query: 61 ENAEIGSLS-TVNA 73
EN +GSL TV+A
Sbjct: 252 ENNPLGSLVITVSA 265
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 401 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 460
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 461 NNSPALHIGSVSATDRDSGTN 481
>gi|410306226|gb|JAA31713.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 927
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|410266126|gb|JAA21029.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|350581224|ref|XP_003480991.1| PREDICTED: protocadherin gamma-C5-like [Sus scrofa]
Length = 889
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE ++ Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDRETVSHYIIELQAHDAGSPPLHARLTIQLNISDVNDNAPSFTQRLYTAYIAE 465
Query: 62 NAEIGS-LSTVNAT 74
N G+ L TV A+
Sbjct: 466 NRPPGALLCTVAAS 479
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A + L D PA + I++T+ D+NDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQAGHQLVLTAVDGGLPARSGTTHISVTVLDVNDNAPAFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPVGTLLLRLNAT 267
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E ++ + + D NDNAPE AS++N +LE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCVVQVDVGDANDNAPEVLLASLVN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|345328629|ref|XP_001506805.2| PREDICTED: protocadherin alpha-3 [Ornithorhynchus anatinus]
Length = 842
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + EN GS
Sbjct: 415 VDREKVAAYVLLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPAYTVLVKENNPPGS 474
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 475 HIFTVSA 481
>gi|395504764|ref|XP_003756717.1| PREDICTED: protocadherin gamma-A2-like [Sarcophilus harrisii]
Length = 941
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+++ Y + V+D PA + I L + DINDN P F+ SA I EN
Sbjct: 510 RALDREQVSVYNITVRVEDFGSPALSTDTHILLQVADINDNPPTFSQSTYSAYIQENNPR 569
Query: 66 GS 67
G+
Sbjct: 570 GA 571
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L D P + I + + D NDN P F + ++
Sbjct: 295 ELVLEKALDREEEAVHYLMLTAWDGGDPVRTGTARIRVNVLDANDNTPVFTQPEYTVNVP 354
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ L TVNAT
Sbjct: 355 ENIPQGTVLLTVNAT 369
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T + LD E + + V+ +D + I +T+ D+NDN PE A + SI
Sbjct: 402 ELSTLQNLDYENAEFHEM--EVEAQDALGLRSRAKIHVTVLDVNDNTPEVAITSVTNSIP 459
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 460 ENAPPGTV 467
>gi|157649931|gb|ABV59356.1| protocadherin nu9 [Callorhinchus milii]
Length = 983
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE I+ Y + DR P I L ++DINDNAP F + A ++EN IG
Sbjct: 411 LDRENISSYDITVMCSDRGTPPLTSNKTIRLEVSDINDNAPRFPQPLYRAHVMENNVIGT 470
Query: 67 SLSTVNA 73
SL T A
Sbjct: 471 SLFTAKA 477
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDREK + + L +D P + I + + D NDN P F+ + AS+ EN
Sbjct: 196 KPLDREKQSSHRLVLIAKDGGVPERSGTAQIIINVEDANDNIPVFSQSVYRASLPENVPK 255
Query: 66 GSLST-VNAT 74
G+L +NAT
Sbjct: 256 GTLVIRLNAT 265
>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECV--SLITLTLTDINDNAPEFASVINSASI 59
L+T++ LDRE + YTL V D P +++++T+ D NDN P F + S SI
Sbjct: 70 LRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQPAIVSITVLDENDNVPVFDQEVYSVSI 129
Query: 60 LENAEIGS 67
EN +G+
Sbjct: 130 PENITVGA 137
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVINSASI 59
L+T++ LDRE + YTL V D P T+++T D NDN P F + S SI
Sbjct: 390 LRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVYSVSI 449
Query: 60 LENAEIGS 67
EN +G+
Sbjct: 450 PENITVGA 457
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
+ T + LD E + YTL D P ++ +++ +INDN+P F+ I SASI
Sbjct: 282 VTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASI 341
Query: 60 LENAEIG 66
EN +G
Sbjct: 342 DENTTVG 348
>gi|109079008|ref|XP_001090348.1| PREDICTED: protocadherin beta-6 isoform 1 [Macaca mulatta]
Length = 793
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R TL D P S I + + DINDN PEFA + A I
Sbjct: 191 ELVLDKPLDREEQPRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEFAQELYEAQIP 250
Query: 61 ENAEIGSLS-TVNA 73
EN +GSL TV+A
Sbjct: 251 ENNPLGSLVITVSA 264
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 400 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 459
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 460 NNSPALHIGSVSATDRDSGTN 480
>gi|20988748|gb|AAH29681.1| Pcdhb14 protein, partial [Mus musculus]
Length = 652
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 49 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 108
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 109 ENSPVGSL 116
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 259 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 318
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 319 NNSPALHIGTISATDSDSGSN 339
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 156 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 213
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 214 EN----SPETIVAIFGIS 227
>gi|397517986|ref|XP_003829183.1| PREDICTED: protocadherin gamma-A12 [Pan paniscus]
Length = 918
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 195 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 254
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 255 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 295
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 412 LDREQVPSYNITVTAADRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 471
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 472 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 506
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 303 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 360
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 361 NSPRGTL 367
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE++ RY LN + D+ P L+T+ + D NDN P+F SA + EN+ I
Sbjct: 764 RPLDRERVDRYFLNITIYDQGIPQMSGWRLLTVIIEDTNDNDPQFYQDSYSALVSENSAI 823
Query: 66 G 66
G
Sbjct: 824 G 824
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+TA +DRE Y L A Q D C S I L + D+NDNAP F+S AS+
Sbjct: 3084 ELRTAIVMDRELAPSYKLIA--QATDGGGLFCRSDIFLKVLDVNDNAPLFSSTHYLASVY 3141
Query: 61 ENAEIGSLST 70
ENA +L T
Sbjct: 3142 ENASPKALLT 3151
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE ++RY+L+ D PA I + ++D+NDN P F ++ I
Sbjct: 3399 LKVNKKLDRELVSRYSLSVQAFDSGSPAMSSTVTINIDISDVNDNPPVFNPPNSTVVIQL 3458
Query: 62 NAEIGS 67
N G+
Sbjct: 3459 NQAAGT 3464
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E Y L D P +++T+ L D+NDNAP F+ I + + E
Sbjct: 3294 ISVADDLDFEVCKDYYLTIEAWDNGNPPLSTATMVTIELMDVNDNAPAFSQDIYNLLVSE 3353
Query: 62 NAEIGSLST 70
+A +G T
Sbjct: 3354 DASVGQTVT 3362
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LD E ++ L V+D++ P ++ I + + D NDN P F S + A+ E
Sbjct: 1496 TADRLDYEARTQHILTIMVKDQEFPFNRDLARILVAVEDSNDNIPYFTSTVYDATAYETF 1555
Query: 64 EIGSLSTVNAT 74
+G+ S V T
Sbjct: 1556 SVGT-SVVQVT 1565
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE + L V+D + S+ TL+ L D+ND +P F SA +LE+
Sbjct: 866 ASQLDRETFPIFILKIEVRDMAERGTRRSSVTTLSIILEDVNDCSPAFIPTSYSARVLED 925
Query: 63 AEIGSLST 70
G++ T
Sbjct: 926 LPPGTVIT 933
>gi|301608221|ref|XP_002933689.1| PREDICTED: protocadherin gamma-B7-like [Xenopus (Silurana)
tropicalis]
Length = 816
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T+ LDREK Y + +D+ P I L LTD+NDNAP F + A I
Sbjct: 403 KLVTSMNLDREKTPEYNITIKAEDKGSPQLTNSKTIQLILTDVNDNAPVFDQINYVAYIK 462
Query: 61 ENAEIGS 67
EN GS
Sbjct: 463 ENNPSGS 469
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P+ SLI + + D+NDN P F ++
Sbjct: 193 ELVLEKPLDREKKNSSVLILSAFDGGTPSKTGTSLIKIAIIDVNDNHPLFNKDTYRVTVS 252
Query: 61 ENAEIGSL-STVNAT 74
ENA +G L +NAT
Sbjct: 253 ENAPLGFLVVNLNAT 267
>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
Length = 3360
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P + + + + D ND++P F + AS+
Sbjct: 1872 ELSTTRALDREEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQYQASVR 1931
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A++G+ LS+ + G+N
Sbjct: 1932 EDAQVGTTVLVLSSADEDEGLN 1953
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L D +P L+++ + D+NDN P F + +A++ E
Sbjct: 603 ISTTRSLDREAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDNEPVFLKQVYNATLPE 662
Query: 62 NAEIG 66
+A +G
Sbjct: 663 HAPVG 667
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE TL V D PA ++I T+ D ND+AP+ + +L
Sbjct: 1768 EVVTAATLDREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVL 1827
Query: 61 ENAEIGSLSTVNAT 74
EN E G + T A+
Sbjct: 1828 ENQEPGLVYTFLAS 1841
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D+ P ++I + +TDINDNAP F + I+EN+ G+
Sbjct: 2293 LDYEYTSTYSLIVQAMDKGMPRLSDTTVIKIQVTDINDNAPIFLPS-EAVEIVENSLPGT 2351
Query: 68 LST 70
+ T
Sbjct: 2352 IVT 2354
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E +++ L D P +T+T+ D+ND AP F + AS+ E
Sbjct: 1664 LTTASPLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1723
Query: 62 NAEIGSLST----VNATIGVN 78
N G T V+ G+N
Sbjct: 1724 NQNPGEFVTRVEAVDRDSGIN 1744
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS---- 56
EL + LD E+ A + + V D P +L+ +++TDINDN P F +
Sbjct: 1233 ELISWVALDHEQRAHHQVAVLVSDHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELY 1292
Query: 57 ASILENAEIGSLST 70
+LE + L T
Sbjct: 1293 VKVLEGQPVNMLVT 1306
>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
Length = 3360
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+++ +TL D P + + + + D ND++P F + AS+
Sbjct: 1872 ELSTTRALDREEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQYQASVR 1931
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A++G+ LS+ + G+N
Sbjct: 1932 EDAQVGTTVLVLSSADEDEGLN 1953
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L D +P L+++ + D+NDN P F + +A++ E
Sbjct: 603 ISTTRSLDREAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDNEPVFLKQVYNATLPE 662
Query: 62 NAEIG 66
+A +G
Sbjct: 663 HAPVG 667
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE TL V D PA ++I T+ D ND+AP+ + +L
Sbjct: 1768 EVVTAATLDREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVL 1827
Query: 61 ENAEIGSLSTVNAT 74
EN E G + T A+
Sbjct: 1828 ENQEPGLVYTFLAS 1841
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D+ P ++I + +TDINDNAP F + I+EN+ G+
Sbjct: 2293 LDYEYTSTYSLIVQAMDKGMPRLSDTTVIKIQVTDINDNAPIFLPS-EAVEIVENSLPGT 2351
Query: 68 LST 70
+ T
Sbjct: 2352 IVT 2354
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E +++ L D P +T+T+ D+ND AP F + AS+ E
Sbjct: 1664 LTTASPLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKE 1723
Query: 62 NAEIGSLST----VNATIGVN 78
N G T V+ G+N
Sbjct: 1724 NQNPGEFVTRVEAVDRDSGIN 1744
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS---- 56
EL + LD E+ A + + V D P +L+ +++TDINDN P F +
Sbjct: 1233 ELISWVALDHEQRAHHQVAVLVSDHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELY 1292
Query: 57 ASILENAEIGSLST 70
+LE + L T
Sbjct: 1293 VKVLEGQPVNMLVT 1306
>gi|395736290|ref|XP_003776729.1| PREDICTED: protocadherin gamma-B7 [Pongo abelii]
Length = 808
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + G N R ++ DL
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDL 496
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C +I + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCKVII--EVLDENDNSPEIIITSLSDHIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|355750264|gb|EHH54602.1| hypothetical protein EGM_15478 [Macaca fascicularis]
Length = 720
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R TL D P S I + + DINDN PEFA + A I
Sbjct: 191 ELVLDKPLDREEQPRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEFAQELYEAQIP 250
Query: 61 ENAEIGSLS-TVNA 73
EN +GSL TV+A
Sbjct: 251 ENNPLGSLVITVSA 264
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 400 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 459
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 460 NNSPALHIGSVSATDRDSGTN 480
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ +R LDRE + Y L A+ DR P+ + I +T+ D+NDNAP F + + E
Sbjct: 1184 VRNSRRLDRENVPFYELTAYAVDRGVPSQQTPVHIQVTVLDVNDNAPVFPADDFEVLVKE 1243
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1244 NSAVGSV 1250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E YTL QD +P ++++ +TD+NDN P F S AS+
Sbjct: 766 EIQVVAPLDYEAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASV 825
Query: 60 LENAEIGS 67
LE+A IGS
Sbjct: 826 LESAPIGS 833
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G
Sbjct: 879 LDRESVEHYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEYYVRLNEDAAVGT 938
Query: 67 SLSTVNA 73
S+ TV A
Sbjct: 939 SVVTVTA 945
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F S ++ E+A
Sbjct: 1084 LDYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRYQGTVSEDA 1139
>gi|194219787|ref|XP_001502132.2| PREDICTED: protocadherin gamma-A12 [Equus caballus]
Length = 819
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK A + L D P + I + + D+NDNAP FA S+
Sbjct: 193 ELVLERALDREKKAVHHLVLTASDGGDPVRTGTARIRVMVVDVNDNAPAFAQSEYRVSVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT G N ++FR D + +FK
Sbjct: 253 ENVAVGTELLLVNATDPDEGANAEVTYSFRYVDNKAAQIFK 293
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y + DR P + I+LT+ D NDN P F+ SA I EN G+
Sbjct: 410 LDRELVPSYNITVTATDRGSPPLATDTHISLTVADTNDNPPTFSRASYSAYIPENNPRGA 469
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 470 -SIVSVT 475
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T L+ E+ Y + VQ D + + + +T+ D+NDNAPE S+SILE
Sbjct: 301 ISTIGELNHEESGFYEM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVVTSLSSSILE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPSGTL 365
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T + LDRE+I+ Y ++ +D+ P + + L + D+NDN+PEF + ++
Sbjct: 632 QLTTRKKLDREEISHYEIHVIAKDQGLPPQSSTATVYLNVIDVNDNSPEFYPLNYFVAVP 691
Query: 61 ENAEIGS 67
EN + GS
Sbjct: 692 ENVKPGS 698
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
RGLD E + Y + +D D P V +T+ +TD NDN+P F S + +ASILE
Sbjct: 2637 GRGLDYETLPVYEVWIEAKDSDVPPLRTVLQLTINVTDANDNSPVFNSNLYNASILE 2693
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + +DRE + YTL+ +DR P + I + + D NDN+P F SASI E
Sbjct: 2102 LRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAE 2161
Query: 62 NAEIG-SLSTVNAT 74
NA IG S+ V+AT
Sbjct: 2162 NASIGASVLQVSAT 2175
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ R LDRE A YTL+ D P + + + D+ND+ PEF A+I
Sbjct: 2318 EISLLRALDREAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSYHATIN 2377
Query: 61 ENAEIGS-LSTVNAT---IGVN 78
EN+ + + + T AT IG+N
Sbjct: 2378 ENSPLSTWVVTPTATDKDIGLN 2399
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+ Y L D+ P + + +T+ D NDN P F+ + S ++
Sbjct: 2737 EIYTNARLDREETPAYELTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSRLF-SVNVT 2795
Query: 61 ENAEIGSL 68
ENA++GS
Sbjct: 2796 ENADLGSF 2803
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LD + I Y LN +D +++T+TLTDINDN+P F I A I EN
Sbjct: 3165 LDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISEN 3219
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE Y L D +Q +++T+ +TD NDN P F S I ENA+
Sbjct: 1794 LDRETKDVYKLTVRASDGNQ---HTDTVLTVQITDTNDNPPAFLETAYSFDIPENAQRGH 1850
Query: 65 -IGSLSTVNATIGVN 78
+G + V+A +G+N
Sbjct: 1851 KVGQVKAVDADLGIN 1865
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TAR LDRE Y+L D P + + + +TDINDN P F + +L
Sbjct: 3474 QIETARFLDRETTPEYSLVVGGIDTGLPPQTGTTTVKIHITDINDNGPTFDPRV-VGKVL 3532
Query: 61 E----NAEIGSLSTVNATIGVNRCGHTFR 85
E N +I +LS + + N T++
Sbjct: 3533 ENEPPNTKIMTLSAKDPDLPPNGAPFTYK 3561
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE Y+L+ D P+ V + + + D NDN+PEF + S +I E
Sbjct: 1041 LYVRQSLDREDKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSPEFTNASFSFNIRE 1100
Query: 62 NAE----IGSLSTVNATIGVN 78
N +G L+ + IG N
Sbjct: 1101 NEPPDSFVGKLTATDRDIGRN 1121
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE I + L D QPA +S L+T+ + D+NDNAP F S +NSA
Sbjct: 1469 IHTLLPIDRETIDTFRLTVVATDEAQPASARLSANKLVTVIVEDVNDNAPVFVS-MNSAI 1527
Query: 59 ILENAEI 65
+ +N +
Sbjct: 1528 LPQNTQF 1534
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L QD PA + + D+NDN P F + + I EN I +
Sbjct: 1896 LDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSYTNEIFENVSIAT 1955
Query: 68 -LSTVNAT 74
+ TV+AT
Sbjct: 1956 PIVTVSAT 1963
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSASIL 60
T + LDRE+ Y L D+ +P + +S +T+ L D+ND +PEF + N S+
Sbjct: 1996 TKKELDRERQGLYNLVVTATDQAKPPDQRLSSTVQVTIILKDVNDMSPEFVTP-NETSVA 2054
Query: 61 ENAEIGSL 68
EN I ++
Sbjct: 2055 ENIAINTV 2062
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I++Y L D+ P + + + + D+ND+ P F SA + E A G+
Sbjct: 426 LDREEISKYNLTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEYSAILSELAPSGT 485
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW+ + +T+T+ D NDNAPEF
Sbjct: 2847 LDREQQDEYLLKVAAVDG---AWKAETPLTITIQDQNDNAPEF 2886
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILE----N 62
LDRE ++ Y L +D Q + +++ + D NDN+PEF + S++E N
Sbjct: 1261 LDRETVSNYLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSKISVIETTPVN 1320
Query: 63 AEIGSLSTVNATIGVN 78
E+ +A +G+N
Sbjct: 1321 TELIQFRATDADLGMN 1336
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
+ LD E+++ Y LN D P L + + D NDN P F S
Sbjct: 1365 KPLDYEELSAYQLNITASDNGNPRLSTTILFAIAVEDANDNPPSFPS 1411
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T+ LDRE+ Y QD +P V+L T+T+TD NDN+P F+S +I
Sbjct: 2423 ITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNL-TITVTDENDNSPSFSSTKYEVNI 2481
Query: 60 LENAEIGSL 68
+ + G
Sbjct: 2482 SDKTKAGEF 2490
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 2 LKTARGLDREKIARYT------LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
+KT DRE++ + T L A V D P + + +TD+NDN P+F
Sbjct: 1144 IKTLHVFDREELVQTTGLNYLSLEATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPY 1203
Query: 56 SASILENAEIGS----LSTVNATIGVN 78
+ E + +G+ L T +A G+N
Sbjct: 1204 RVQVSEGSPVGTQVIRLFTSDADEGLN 1230
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E++T LDRE + RY L V QP + + + + DINDN PEF S S
Sbjct: 83 EIRTNAVLDRENLKNDRYDL---VVLSSQPTYPIE--VRILVLDINDNPPEFPEPSISVS 137
Query: 59 ILENAEIGSLSTVNAT----IGVNRCGHTFR 85
E+A G+ ++A IG N +R
Sbjct: 138 FSESAAAGTRLLLDAATDKDIGTNGVSDDYR 168
>gi|18087757|ref|NP_291064.1| protocadherin gamma-A3 precursor [Mus musculus]
gi|13876332|gb|AAK26086.1| protocadherin gamma A3 [Mus musculus]
gi|38173716|gb|AAH60691.1| Protocadherin gamma subfamily A, 3 [Mus musculus]
Length = 928
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LD E++++Y ++ D P + ITL ++DINDN P F SA I E
Sbjct: 401 LVTARSLDHEEVSQYNISLRATDGGSPPLSTETHITLHVSDINDNPPTFTHASYSAYIPE 460
Query: 62 -NAEIGSLSTV---------NATIGVNRCGHTFRGKDLRCY 92
NA S+ +V NA + + T +G L Y
Sbjct: 461 NNARGASIFSVTAQDPDTDKNAQVTYSLAEDTLQGLPLSSY 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK A + L+ D P I + ++D NDN P F S+L
Sbjct: 190 ELVLERALDREKKAVHQLDLIASDGGDPVHTSKLCIQVIVSDANDNPPVFTKPEYHVSVL 249
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 250 ENVPVGTRLITVNAT 264
>gi|432093059|gb|ELK25349.1| Protein dachsous [Myotis davidii]
Length = 510
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LDRE L QD +P L+++T+ D+NDN P F + +A+++E
Sbjct: 425 ISTTRSLDREVQEAVELRVVAQDLGEPPLSATCLVSITVNDVNDNEPIFWRQVYNATLVE 484
Query: 62 NAEIG 66
+A++G
Sbjct: 485 HAQVG 489
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK+ LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3085 ELKSLAPLDREKIPVYNLVARATDGG--GRFCQSEIHLILEDVNDNPPVFSSDHYTACVY 3142
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +GVNR
Sbjct: 3143 ENTATKALLTRVQATDPDVGVNR 3165
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L +D PA V+ + + +TD+NDNAP+F+ + SA I E+A +G
Sbjct: 3299 ALDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQAVYSAVISEDAAVG 3358
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 1519 LYTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIINVEDSNDHSPYFTSPLYEASVFE 1578
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1579 SAAVGS 1584
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+I+ Y+L +D P + + ++D+NDN P F +A I E
Sbjct: 3399 VKVKKKLDRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNGPIFTPANYTAVIQE 3458
Query: 62 NAEIGS 67
N +G+
Sbjct: 3459 NKPVGT 3464
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LDREK Y LN + D P L+T+T+ D NDN P F S +ILE+ +
Sbjct: 790 LDREKTDLYLLNITIYDLGNPPKSAWRLLTVTVEDANDNKPVFLQDSYSVNILESTSL 847
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E I + +L D P L+++ +TD+NDN P F +I + + E A
Sbjct: 2349 TARMLDHELIQQCSLKVRATDNGFPPLSSEVLVSIFITDMNDNPPVFNQLIYESYVSELA 2408
Query: 64 EIGSLST 70
G T
Sbjct: 2409 PRGHFVT 2415
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK +T D + + +L+++T+TDINDNAP F + S+
Sbjct: 2876 ISTLKDLDHEKDPAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVFEHEVYRGSVK 2935
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2936 ESDPPGEVVAVLST 2949
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A YTL +D+ + + S++ L L D+ND +P F + +LE+
Sbjct: 890 ADQLDRESKANYTLKIEARDKAESGLQQFSIVPLKVFLDDVNDCSPAFIPSSYNVKVLED 949
Query: 63 AEIGSL 68
+G++
Sbjct: 950 LPVGTV 955
>gi|73949393|ref|XP_849300.1| PREDICTED: protocadherin gamma-A1 [Canis lupus familiaris]
Length = 813
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE +RY + D PA + I+L +TDINDN P F S ILE
Sbjct: 404 LVTERTLDRELTSRYNITVTAADHGTPALYTETHISLQVTDINDNPPVFPQNSYSTFILE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
>gi|47213709|emb|CAF94623.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3996
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A + L D QP +L+ + + D+NDNAP F + +L
Sbjct: 3449 ELVVEKALDRETQASFRLLLTALDGGQPEKSGSTLLLIKILDVNDNAPVFNEPVTRVRLL 3508
Query: 61 ENAEIGSLST-VNAT 74
EN +G+L T +NAT
Sbjct: 3509 ENVALGTLVTKLNAT 3523
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDREKI+ Y + D P +I +++TD+NDN P F + + E
Sbjct: 1447 LVTSGVLDREKISEYNIEVTATDSGSPPLSSRKIIPVSITDVNDNPPVFTQASYNVYLKE 1506
Query: 62 NAEIGS-LSTVNAT 74
N GS L +V+A+
Sbjct: 1507 NGLPGSILYSVSAS 1520
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE + YT+ D P + + L+D+NDNAP F+ S I E
Sbjct: 3663 LITAGQLDRESVPEYTVVVKAADGGSPPLSSQTTFVVKLSDVNDNAPTFSQPSYSIDIQE 3722
Query: 62 ----NAEIGSLSTVNATIGVN 78
NA I +S + +G N
Sbjct: 3723 NNALNAPIAVVSATDPDLGDN 3743
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDREK++ Y + D P +I +++TD+NDN P F + + E
Sbjct: 2455 LVTSGVLDREKVSEYNIEVTATDSGSPPLSSRKIIPVSITDVNDNPPVFTQASYNVYLKE 2514
Query: 62 NAEIGS-LSTVNAT 74
N GS L +V+A+
Sbjct: 2515 NGLPGSILYSVSAS 2528
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A+ LDRE+ A + L D P + +T+ + DINDN P F AS+
Sbjct: 480 ELIIAKNLDRERKAVHKLVLTAIDGGNPVRSGSAQLTIIVLDINDNVPAFEKTQYKASVS 539
Query: 61 ENAEIGSL 68
E+AE G++
Sbjct: 540 EDAEKGTV 547
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE I+ Y + D P +I +++TD+NDN P F + + E
Sbjct: 694 LVTSGVLDRENISEYNIEVIATDSGSPPLSSRKIIPVSITDVNDNPPVFTQASYNVYLKE 753
Query: 62 NAEIGS-LSTVNAT 74
N GS L +V+A+
Sbjct: 754 NGLPGSILYSVSAS 767
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK + + +D+ QP E + + + DINDNAPE + E+A+ G+
Sbjct: 2356 LDYEKNTMHEIGITAKDKGQPEMEGHCRVKIMILDINDNAPEIILTSTPNPVREDAQRGT 2415
Query: 68 L 68
+
Sbjct: 2416 V 2416
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A + + D P S IT+ + DINDN P F + ++
Sbjct: 1233 ELVLEKPLDREKKALHKILLTALDGGNPVRSGTSQITINVLDINDNFPVFEKNLYKVTLG 1292
Query: 61 ENAEIGSL 68
E + G+L
Sbjct: 1293 EKSFQGAL 1300
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ +D EK + Y +D PA E + + + D+NDNAPE ++ I
Sbjct: 3557 EIRVKGDVDYEKNSVYHFTVQARDGGSPAMEGSCNVIVDVIDVNDNAPEVTLTSLNSPIR 3616
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGK 87
E++ + TV A I V GK
Sbjct: 3617 EDS---APETVIALISVRDLDSGVNGK 3640
>gi|395736294|ref|XP_003776730.1| PREDICTED: protocadherin gamma-A4 [Pongo abelii]
Length = 820
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+++ Y + D+ P + ++L + DINDN P F SA I E
Sbjct: 404 LLTHKTLDREEVSEYNITVTATDQGTPPLSTETHVSLQVMDINDNPPTFPHASYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L TV AT G N ++FR + LF+
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVREKISQLFQ 293
>gi|301753549|ref|XP_002912602.1| PREDICTED: protocadherin beta-2-like [Ailuropoda melanoleuca]
Length = 798
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A L D P +L+ + + D+NDNAPEFA +L
Sbjct: 194 QLVLDKALDREEQAEIRLTLTALDGGTPPRTGTALVRIEVLDVNDNAPEFAKRFYEVQVL 253
Query: 61 ENAEIGSL-STVNAT 74
EN+ IG L +TV+A+
Sbjct: 254 ENSPIGFLVATVSAS 268
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A+Y + V D P + +++T++D+NDNAP F+ + + E
Sbjct: 404 LVTNTALDRETRAQYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 464 NNSPALHIGSVSATDRDAGAN 484
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS----VINSA 57
+K + +DRE++A Y L QD+ P +++ + +TD+NDN+PEF+S + S
Sbjct: 3329 IKVSGDIDREEVASYRLKVRAQDQGLPPQVADTVVDIEVTDVNDNSPEFSSTNLTTVLSE 3388
Query: 58 SILENAEI 65
S L NA +
Sbjct: 3389 SSLPNAAV 3396
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E YTL D P S + +++TD NDN PEF+ SA + EN+ +
Sbjct: 3228 RKLDYETTKLYTLTVEASDAGPPVLRSTSYVRISVTDSNDNGPEFSEKRYSAKVDENSAL 3287
Query: 66 GSL 68
G+
Sbjct: 3288 GTF 3290
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ L+RE YTLN V D P ++ + + + +IND PEF+ I ++ E+A I
Sbjct: 3124 KPLNRELKENYTLNVEVMDGGTPPLSSIATVQIKVLNINDVPPEFSHSIYHGNVSEDAPI 3183
Query: 66 G 66
G
Sbjct: 3184 G 3184
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE I+ YTLN D + +++ + +TD+ND +P F + ++
Sbjct: 742 ELTVAMPLDRETISSYTLNISAVDCGKHRKSAYTILNVKITDVNDCSPVFDKTVYEVTLP 801
Query: 61 ENAEIGSLST 70
EN +G T
Sbjct: 802 ENITVGQTVT 811
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++KT++ L+RE +A Y LN VQD+ + + +T+ D NDN P F +I
Sbjct: 56 DIKTSKRLNRESVASYELNVVVQDKRTKRTLDRTKVNITVDDSNDNRPIFLKKKYLKTIP 115
Query: 61 EN----AEIGSLSTVNATIGVN 78
E+ I + V+A +G N
Sbjct: 116 EDIPMHTSIARIEAVDADVGPN 137
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ A LDRE+ + Y+L D + S+ +T+ + D+NDN+P+ A A +
Sbjct: 1370 ITVAHSLDREEKSFYSLRVEATD----GYNTASVPVTINILDVNDNSPQPARREYRAHVA 1425
Query: 61 ENAEIGSLSTV--NATIGVN 78
EN+++G+L T + GVN
Sbjct: 1426 ENSDVGTLVTTVKDPDAGVN 1445
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LD E +Y V D P + + + +TDIND AP F++ A++
Sbjct: 1786 ITTAKVLDYEVTPQYAFKIKVTDSGNPRLSAFADVKIHVTDINDIAPVFSASTYHATVYL 1845
Query: 62 NAEIGS-LSTVNATIGVNRCGHTF 84
+ G+ ++ V AT G + TF
Sbjct: 1846 PSYAGTRVTMVTATDGDSAANLTF 1869
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 4 TARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T RG LDREK + D ++ + + D+ND P+F+ AS+ E+
Sbjct: 2816 TTRGALDREKQPSFEFQVRATDNGTTRLTSLTTVRAIVLDVNDTPPKFSQSEFMASVKED 2875
Query: 63 AEIG-SLSTVNAT 74
A IG S++T+ AT
Sbjct: 2876 ALIGQSVTTITAT 2888
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
+ T R LDRE + Y L D P T+ +TD NDN PEF
Sbjct: 1160 ITTLRPLDREFKSEYKLTVSASDGGTPPVSTDVTFTVKITDENDNQPEF 1208
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + + D +P+ + + + L D NDNAP F + +ASIL +A
Sbjct: 2297 AKSLDYESRVVHEMIIVAADEGKPSLTGETRVRVVLMDANDNAPRFDKSMYAASILGSAS 2356
Query: 65 IGSLST 70
G T
Sbjct: 2357 PGQFVT 2362
>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
Length = 3278
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1786 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFPVPSYSVEVP 1845
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 1846 EDAPVGTL 1853
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F + + E
Sbjct: 1581 LSVVRPLDREQRAEHVLTVVALDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRE 1640
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1641 NSPPGTSLLTLKAT 1654
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2540 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA 2599
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 187 ELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 246
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 247 ESLAPGS 253
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 408 ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 453
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + + L VQD P + + + D+NDN+P F +A
Sbjct: 1143 EVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGAA 1199
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + +T+ D ND+ P F + S + E
Sbjct: 1683 LTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPE 1742
Query: 62 NAEIGSLSTVNAT 74
+ +L+T+ A+
Sbjct: 1743 GQDPQTLTTLRAS 1755
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 82 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 135
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 136 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 173
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLI--TLTLTDINDNAPEFASVINSASI 59
L+ +R LD E A++ L D PA SL+ T+ + D+ND+ P F + S S+
Sbjct: 2639 LRLSRPLDCETQAQHQLVVQAAD---PAGTHFSLVPVTVEVQDVNDHGPAFPLSLLSTSL 2695
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2696 AENQPPGTLVT 2706
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL TA LDRE A Y + D ++ IT+T+ D+ND+AP F +
Sbjct: 1890 ELSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPT 1942
>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
Length = 3291
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1799 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFPVPSYSVEVP 1858
Query: 61 ENAEIGSL 68
E+A +G+L
Sbjct: 1859 EDAPVGTL 1866
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F + + E
Sbjct: 1594 LSVVRPLDREQRAEHVLTVVALDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRE 1653
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1654 NSPPGTSLLTLKAT 1667
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2553 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGA 2612
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 200 ELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 259
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 260 ESLAPGS 266
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 421 ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF 466
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + + L VQD P + + + D+NDN+P F +A
Sbjct: 1156 EVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGAA 1212
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + +T+ D ND+ P F + S + E
Sbjct: 1696 LTTLRALDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPE 1755
Query: 62 NAEIGSLSTVNAT 74
+ +L+T+ A+
Sbjct: 1756 GQDPQTLTTLRAS 1768
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 95 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 148
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 149 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 186
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLI--TLTLTDINDNAPEFASVINSASI 59
L+ +R LD E A++ L D PA SL+ T+ + D+ND+ P F + S S+
Sbjct: 2652 LRLSRPLDCETQAQHQLVVQAAD---PAGTHFSLVPVTVEVQDVNDHGPAFPLSLLSTSL 2708
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2709 AENQPPGTLVT 2719
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL TA LDRE A Y + D ++ IT+T+ D+ND+AP F +
Sbjct: 1903 ELSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPT 1955
>gi|80751169|ref|NP_001032216.1| protocadherin gamma-A2 precursor [Rattus norvegicus]
gi|50512398|gb|AAT77594.1| protocadherin gamma a2 [Rattus norvegicus]
gi|149017316|gb|EDL76367.1| rCG49295, isoform CRA_c [Rattus norvegicus]
Length = 931
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + +D+ P+ + + L + DINDN P F+ SA I E
Sbjct: 404 LVTTRALDREQFSFYNITLRAKDQGSPSLSTDAHLLLQVADINDNPPSFSRGAYSAYIPE 463
Query: 62 NAEIGSL----------STVNATIGVNRCGHTFRGKDLRCY 92
N G+ S NA + + TF+G L Y
Sbjct: 464 NNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSY 504
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L DR +P I + + D+NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLVASDRGKPVRSSTCRIRVKVLDVNDNAPVFTQPEYRVSVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TV AT
Sbjct: 253 ENMPVGTRILTVTAT 267
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 1 ELKTARG-------LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
ELK+ G LD EK + ++ QD P + + +T+ D+NDNAPEF
Sbjct: 293 ELKSTSGDITITKSLDYEKAKFHEIDIEAQD--GPGLLTRTKVIVTVLDVNDNAPEFYMT 350
Query: 54 INSASILENAEIGSL 68
+AS+ E+A +G++
Sbjct: 351 SATASVPEDAPLGTV 365
>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
Length = 4369
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP + + + + D+NDN P F + S ++
Sbjct: 3397 ELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDVAIQVADVNDNPPRFFQLNYSTTVQ 3456
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3457 ENSPIGS 3463
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E R+ + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2350 EMSTVQELDYEAQQRFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2409
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2410 ELATCGHL 2417
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D+ Q +L+ +++TD NDNAP FAS S++
Sbjct: 2877 ITTLQELDCETCQTYNFHVVAYDQGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVI 2936
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGKDLRCY 92
EN+E G L AT+ + + + + + CY
Sbjct: 2937 ENSEPGELV---ATLKILDADISEQNRQVTCY 2965
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSRAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D ND+AP F +I E
Sbjct: 772 LTIAAPLDYETTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDHAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE +Y L V+ RDQP V+ + +TL D+NDN+P+ + +N
Sbjct: 874 ELVVTGHLDRESEPQYILK--VEARDQPRKGHQLFSVTDLIVTLEDVNDNSPQCITELNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTILT 945
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + +TL + D+NDNAP F + ++
Sbjct: 3086 ELTTLTPLDRERKDVFNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCAVAVF 3143
Query: 61 ENAEI 65
+N +
Sbjct: 3144 DNTTV 3148
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + ++ + + +TD+N++ P F S +LENA +G
Sbjct: 3299 LDFETSPKYFLSIECTRKSSSSLSDITTVVVNITDVNEHRPRFPQDPYSTRVLENALVGD 3358
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 3359 VILTVSA 3365
>gi|403270549|ref|XP_003927238.1| PREDICTED: protocadherin-8 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1070
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIPEYNLTLVAEDRGAPPLRTVKPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|402872805|ref|XP_003900292.1| PREDICTED: protocadherin beta-6 [Papio anubis]
Length = 658
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R TL D P S I + + DINDN PEFA + A I
Sbjct: 56 ELVLDKPLDREEQPRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEFAQELYEAQIP 115
Query: 61 ENAEIGSLS-TVNA 73
EN +GSL TV+A
Sbjct: 116 ENNPLGSLVITVSA 129
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 265 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 324
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 325 NNSPALHIGSVSATDRDSGTN 345
>gi|260831354|ref|XP_002610624.1| hypothetical protein BRAFLDRAFT_65814 [Branchiostoma floridae]
gi|229295991|gb|EEN66634.1| hypothetical protein BRAFLDRAFT_65814 [Branchiostoma floridae]
Length = 2206
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE I +Y ++ +DR QPA S++ + + D+NDNAP F + + ++ E
Sbjct: 1328 MMTKVALDRENITQYQISVMAEDRGQPAQNSTSVVIIDVLDVNDNAPRFDESLYAVTLPE 1387
Query: 62 N 62
+
Sbjct: 1388 D 1388
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
L A LDRE + Y ++ D P+ E L+ +T+ D+NDN PEF I +I
Sbjct: 895 LSLASELDREVKSMYRISISASDGGSPSLTSEDAFLVHVTVLDVNDNEPEFLQNIYYVTI 954
Query: 60 LENAEI----GSLSTVNATIGVN 78
E ++I +++ ++A G N
Sbjct: 955 DEQSDIVTNVANITALDADEGSN 977
>gi|149017318|gb|EDL76369.1| rCG49295, isoform CRA_e [Rattus norvegicus]
Length = 299
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK A + L+ D PA I + + D NDN P F S+L
Sbjct: 190 ELVLERALDREKKAVHQLDLIASDGGDPAHTGKLCIQVIVLDANDNPPVFTKPEYRVSVL 249
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L+TVNAT
Sbjct: 250 ENVPVGTRLTTVNAT 264
>gi|403270551|ref|XP_003927239.1| PREDICTED: protocadherin-8 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 973
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIPEYNLTLVAEDRGAPPLRTVKPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|345328979|ref|XP_001512413.2| PREDICTED: protocadherin Fat 4-like [Ornithorhynchus anatinus]
Length = 3217
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+I +YTL D P E ++IT++L D NDN+P F +I
Sbjct: 1119 VKNSSVLDRERIGKYTLQVKATDHLPPHSEAQAVITISLLDENDNSPVFKGTPYEQTIFS 1178
Query: 62 NAEIG 66
N +G
Sbjct: 1179 NRTVG 1183
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVI 54
T LDRE+ Y+ A D P V++IT+T+ DINDN P F+S+I
Sbjct: 1949 TVARLDREEQDLYSFVAEAVDSSTPPNTAVTMITVTIRDINDNPPVFSSLI 1999
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE A Y L D+ QP IT+ + D+NDN P F + ++ ENA I
Sbjct: 1428 KDLDREMQALYNLTITASDQGQPPLTTELNITVIVEDVNDNKPIFEMSKYNVTVHENAAI 1487
Query: 66 GSL 68
G++
Sbjct: 1488 GTV 1490
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L ++ LD E I + + D P+ ++ + + + D+NDN PEF+ I + L
Sbjct: 1531 QLSLSQPLDFETIKWFKIEVKASDGGNPSLHSLTSVFIQVLDVNDNPPEFSQSIYNIFAL 1590
Query: 61 ENAEIGSL 68
EN++ S+
Sbjct: 1591 ENSQSNSV 1598
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE YTL D + ++LT+ D+NDN P F ++ E
Sbjct: 2051 LITGKTLDRETKDNYTLKILATDMGKMQLSATLNLSLTVEDVNDNPPTFPQESFRITVKE 2110
Query: 62 NAEIGSLSTVNAT---IGVNRCGH 82
N ++ V AT IG N H
Sbjct: 2111 NEPPQTILNVTATDKDIGYNAAIH 2134
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
LDRE Y L DR P + + +T+ + D+NDN P+F SA I
Sbjct: 1747 LDREVQDTYKLLLVASDRGTPQRQNYTYVTIGILDVNDNPPQFTKSEYSAKI 1798
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE I+ T+ +D +++ +++ D NDN PEF SI EN+ G
Sbjct: 1021 ALDREVISHITVEIKATQQDNELKTANAMVLVSIQDENDNLPEFERSSYMVSIPENSPDG 1080
Query: 67 S 67
+
Sbjct: 1081 T 1081
>gi|291226386|ref|XP_002733173.1| PREDICTED: cadherin-23-like [Saccoglossus kowalevskii]
Length = 1584
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE+ + D+ P + + +TDINDNAP F ++ N +LENA IG+
Sbjct: 939 VDREEYEWLNITVGAMDKGNPPLNSTAAVYFQITDINDNAPVFTNLENETEVLENATIGT 998
Query: 68 -LSTVNAT 74
+ TV+AT
Sbjct: 999 PIFTVSAT 1006
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVINSASILEN 62
+ LDRE +Y L+ D + S TLT+T D+ND APEF AS+ E+
Sbjct: 1042 KSLDRETTDKYLLSITASDNPGGSSHLQSTDTLTVTILDVNDEAPEFTDDSYKASVRED 1100
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+D + RY L QD P + +++ + INDN P F+ + +ASI E A
Sbjct: 588 MDEKYEGRYMLTVMAQDGGNPPLNSTTEVSIGVEGINDNQPVFSEPLYTASISELA 643
>gi|449267282|gb|EMC78248.1| Protocadherin-1, partial [Columba livia]
Length = 984
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F + A + EN+ +G
Sbjct: 165 LDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVG 223
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ RY D+ P+ + + + + + D NDN P+F + S++
Sbjct: 490 EIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVM 549
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 550 ENMPPLSPVGMVTVIDADKGEN 571
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD E + YT+ D P + + + + D+NDNAP F+ + E
Sbjct: 385 LQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPE 444
Query: 62 NAE----IGSLSTVNATIGVN 78
N E + +S +A G N
Sbjct: 445 NNEPDDLVMEVSASDADSGSN 465
>gi|410913699|ref|XP_003970326.1| PREDICTED: protocadherin alpha-C2-like [Takifugu rubripes]
Length = 824
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 408 ELMVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 467
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 468 ENNAPGAL 475
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 195 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 254
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 255 ENSPIGSLVIKLNAT 269
>gi|410266138|gb|JAA21035.1| protocadherin gamma subfamily B, 7 [Pan troglodytes]
Length = 925
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|149017317|gb|EDL76368.1| rCG49295, isoform CRA_d [Rattus norvegicus]
Length = 869
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + +D+ P+ + + L + DINDN P F+ SA I E
Sbjct: 404 LVTTRALDREQFSFYNITLRAKDQGSPSLSTDAHLLLQVADINDNPPSFSRGAYSAYIPE 463
Query: 62 NAEIGSL----------STVNATIGVNRCGHTFRGKDLRCY 92
N G+ S NA + + TF+G L Y
Sbjct: 464 NNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSY 504
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L DR +P I + + D+NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLVASDRGKPVRSSTCRIRVKVLDVNDNAPVFTQPEYRVSVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TV AT
Sbjct: 253 ENMPVGTRILTVTAT 267
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 1 ELKTARG-------LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
ELK+ G LD EK + ++ QD P + + +T+ D+NDNAPEF
Sbjct: 293 ELKSTSGDITITKSLDYEKAKFHEIDIEAQD--GPGLLTRTKVIVTVLDVNDNAPEFYMT 350
Query: 54 INSASILENAEIGSL 68
+AS+ E+A +G++
Sbjct: 351 SATASVPEDAPLGTV 365
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELK AR LDRE+ + YTL D P + I + ++D+NDN P F+ S I
Sbjct: 3320 ELKVARQLDRERTSGYTLTVVASDNGVPPLSSSATINIDISDVNDNPPLFSQANYSLIIQ 3379
Query: 61 ENAEIGSLSTVNATIGVNRCGH 82
EN G+ S + T+ H
Sbjct: 3380 ENRPKGT-SVLQLTVSDQDASH 3400
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE + Y L A DR P + +T+++ DINDN P F +A++ E+ +
Sbjct: 3115 RPLDREVQSVYELTAQAIDRGSPRLSSLCTVTVSILDINDNPPVFEHREYTATVPEDVAV 3174
Query: 66 GS 67
G+
Sbjct: 3175 GA 3176
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+R LDREK + V+ D C + I +T+ D+NDN P FA + ++
Sbjct: 3008 ELKTSRPLDREKQEEHRFK--VRAVDGGGRYCEADIHITVEDVNDNPPLFALDPYTITVF 3065
Query: 61 ENAEIGSL 68
EN E G+
Sbjct: 3066 ENTETGTF 3073
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD E I ++ L A V D PA +T+ +TD+NDNAP F I + ++ E
Sbjct: 2270 ISLAQVLDHEDIQQHKLRARVVDGGVPALSSEVTVTIDVTDLNDNAPMFTEFIYNTTVSE 2329
Query: 62 NAEIG 66
A G
Sbjct: 2330 LAPRG 2334
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+R LDRE+ + L V+D+D P + + + + D NDNAP F + S + E+A
Sbjct: 1197 TSRRLDREQQDEHIL--EVRDQDIPVKRNLVRVIVNVDDTNDNAPWFIGIPYSGRVFESA 1254
Query: 64 EIGS 67
IG+
Sbjct: 1255 AIGT 1258
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITL--TLTDINDNAPEFASVINSASILENA 63
R LDRE+ YTL +D+ + VS + L TL D+NDN P+F + E+
Sbjct: 879 RPLDRERFPFYTLKIAARDQAVSEPQLVSTVPLKITLEDVNDNPPKFVPPNYRIKVREDL 938
Query: 64 EIGSL 68
IG++
Sbjct: 939 PIGTV 943
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E Y + D P ++ + + LTD+NDN P F+ + +A I E+ E+G
Sbjct: 3222 LDYETSHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYAAVISEDVELG 3280
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE Y + V +D+ L+TLT+ D+NDN P F ++ A + +A
Sbjct: 1963 TGIPFDREAQDTYDIVVEVTGQDKSEDAAHVLVTLTVEDVNDNNPMFVNLPYHALVQMDA 2022
Query: 64 EIGSL----STVNATIGVNRCGHTF 84
E G L + V+ +G N H +
Sbjct: 2023 EEGQLVRQVTAVDKDVGSNADIHYY 2047
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE YTLN V D P L+ + + D NDN+P+F
Sbjct: 777 ALDREATDHYTLNITVYDLGVPQKSSSRLLDVKILDANDNSPQF 820
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LDREK+ +YT+ D+ D + + +T+ D+NDN P F + I ++
Sbjct: 2798 VTTLKELDREKMDKYTIAVLATDQGDTIQHISGTTVEVTVADVNDNPPRFTAEIYKGTVS 2857
Query: 61 EN 62
E+
Sbjct: 2858 ED 2859
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E Y L + DR + + + D+NDNAP+ + + S+ E
Sbjct: 1089 IRTQELLDHEATPHYWLTVYAMDRGVVPLSAFVEVYIQVQDVNDNAPQTSEPVYYPSVTE 1148
Query: 62 NA 63
N+
Sbjct: 1149 NS 1150
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 22 VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
V+D+D P + + + + D NDNAP F + S + E+A IG+
Sbjct: 1462 VRDQDIPVKRNLVRVIINVDDTNDNAPWFIGIPYSGRVFESAAIGT 1507
>gi|410948357|ref|XP_003980907.1| PREDICTED: protocadherin gamma-A3 [Felis catus]
Length = 827
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDRE+++ Y + D P ITL + DINDN P F+ SA I E
Sbjct: 404 LVTARSLDREQVSEYNITLRATDGGSPPLSTNIHITLHVADINDNPPAFSQASYSAYIPE 463
Query: 62 NAEIGSL----------STVNATIGVNRCGHTFRGKDLRCY 92
N G+ S NA I T +G L Y
Sbjct: 464 NNPRGASIFCVTAQDPDSIQNAHITFALTEDTIQGAPLSTY 504
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P I + + D NDN P F SI
Sbjct: 193 ELVLERALDREQKKVHQLVLIASDGGNPVHSGNLYIQVIVLDANDNPPVFTQSEYQLSIQ 252
Query: 61 ENAEIG-SLSTVNAT 74
EN +G +L TVNAT
Sbjct: 253 ENLPVGTTLLTVNAT 267
>gi|405953984|gb|EKC21537.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1443
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDREK + + L V D P ++ +T+ D NDN PEF + + ++
Sbjct: 1111 EIFTNMALDREKESFFRLKISVTDAGTPELSAEEIVEITVQDTNDNYPEFQAASYTKTVA 1170
Query: 61 ENAEIGSLSTVNATIGVN 78
EN +GS A I V+
Sbjct: 1171 ENIPVGSTIITTAAIDVD 1188
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE + Y L V D P + T+T++D+NDN P F + E
Sbjct: 1005 VQVSTALDRETRSVYYLVIKVSDLGSPQLYSTATATITISDVNDNPPTFIQGEREFFVDE 1064
Query: 62 N----AEIGSLSTVNATIGVN 78
N ++G L V+ GVN
Sbjct: 1065 NVPFYTKVGRLDAVDKDEGVN 1085
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 459 LDREMVSNYTLSVVATDKGTPPLHASKSIFLKITDVNDNPPEFEQDLYHANVMEVADPGT 518
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ +RYTL DR +P + + IT+ + D NDNAP F +AS+ E+A G
Sbjct: 1908 LDREQHSRYTLQVQAADRGKPTSRQGHCNITVFVEDQNDNAPRFELSKYTASVQEDAPPG 1967
Query: 67 S----LSTVNATIGVN 78
+ ++ +A +GVN
Sbjct: 1968 TRVAQITASDADLGVN 1983
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 881 IRIAKPLDHEAKSQVLLNIQATVGEPPVYGHTQ-VNIEVEDVNDNAPEFETNMVRISVPE 939
Query: 62 NAEIGS 67
NAE+G+
Sbjct: 940 NAELGA 945
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 234 DLQISGFLDRETTPGYSLLIEALDGGSPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 293
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 294 ENATVGT 300
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P +++ +TD+NDN+PE A
Sbjct: 1203 EISTREPLDRELREMYELIVEARDQGTPVRSARVPVSIRVTDVNDNSPEIA 1253
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1107 LDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEENLRRGS 1166
Query: 68 -LSTVNAT 74
+ V AT
Sbjct: 1167 VVGVVTAT 1174
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1313 IRTRVVLDHEERSIYRLGVAATDGGSPPRETVRILRVEVLDLNDNRPTFTSSSLVFRVRE 1372
Query: 62 NAEIG 66
+A +G
Sbjct: 1373 DAVVG 1377
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT LDRE Y L D P + I + + D+NDN P F N S+ E
Sbjct: 2386 VKTNIVLDREIRDIYNLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPN-NLVSVSE 2444
Query: 62 NAEIGSLST 70
E+G++ T
Sbjct: 2445 ATELGAVIT 2453
>gi|355691686|gb|EHH26871.1| hypothetical protein EGK_16947 [Macaca mulatta]
Length = 697
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 345 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTFYTLFVRE 404
Query: 62 N----AEIGSLSTVNATIGVNRC----GHTF--RGKDLRCYNLFK 96
N IGS+S ++ G N GH F R D F+
Sbjct: 405 NNSPALHIGSVSATDSDSGTNAQTTANGHLFALRSLDYEALQAFE 449
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 135 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVHIEVVDINDNAPEFEQPIYKVRIP 194
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 195 ENSSLGSLVATVSA 208
>gi|326673375|ref|XP_003199864.1| PREDICTED: protocadherin alpha-8-like [Danio rerio]
Length = 801
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRERASEYNVTISAADEGTPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +P I + + D+NDN P F + A
Sbjct: 190 ELVLQKALDREKQPVIRLTLTA--VDGGKPPRSGTVNIIVNVIDVNDNIPVFTKSLYKAR 247
Query: 59 ILENAEIG-SLSTVNA 73
I ENA +G S+ TVNA
Sbjct: 248 IPENAPVGYSVITVNA 263
>gi|443683183|gb|ELT87522.1| hypothetical protein CAPTEDRAFT_92665, partial [Capitella teleta]
Length = 803
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ TA LDREK +RY L +D+ + V I + +TDIND+AP F+ SA I+
Sbjct: 347 QVLTAAVLDREKQSRYNLAVLCRDKGKEPQTSVVHIPVNVTDINDHAPVFSQPSYSAEII 406
Query: 61 ENAEIGSLS-TVNAT 74
E IG++ +NAT
Sbjct: 407 ERNYIGAVVLRINAT 421
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+ Y L D PA L+ + + D NDN+PEF + I EN +
Sbjct: 134 RPLDREEQESYELEIVATDGGIPAKSGTLLVHVRVLDTNDNSPEFEKPVYEVFIDEN--V 191
Query: 66 GSLSTVNATIGVNRCGHTFRGK 87
++TV +R H GK
Sbjct: 192 PRMTTVVRVKAEDR-DHGLNGK 212
>gi|296485293|tpg|DAA27408.1| TPA: protocadherin alpha 13 [Bos taurus]
Length = 950
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF +I +LEN+
Sbjct: 198 KSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDNAPEFDQLIYKVRMLENSLN 257
Query: 66 GSLS-TVNAT 74
GSL +NAT
Sbjct: 258 GSLVIKLNAT 267
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y + +D P+ + +++ + D+NDNAP F + + EN G
Sbjct: 413 LDRESASNYEVVVTARDGGSPSLSATASVSVEVADVNDNAPAFPQPEYTVFVKENNPPG 471
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
>gi|326673327|ref|XP_003199841.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 795
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y + D P S+I + ++D+NDNAP F + + + EN++IG+
Sbjct: 410 LDRERASEYNVTISAADEGTPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 68 -LSTVNA 73
L TV+A
Sbjct: 470 VLHTVSA 476
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +P I + + D NDN P F + A
Sbjct: 190 ELVLQKALDREKQPVIRLTLTA--VDGGKPPRSGTVNIIVKIIDANDNIPVFTKSLYKAR 247
Query: 59 ILENAEIG-SLSTVNAT 74
I ENA +G S+ TV A+
Sbjct: 248 IPENAPVGASIITVQAS 264
>gi|156523124|ref|NP_001095976.1| protocadherin alpha-13 precursor [Bos taurus]
gi|154757543|gb|AAI51665.1| PCDHA13 protein [Bos taurus]
Length = 950
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF +I +LEN+
Sbjct: 198 KSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDNAPEFDQLIYKVRMLENSLN 257
Query: 66 GSLS-TVNAT 74
GSL +NAT
Sbjct: 258 GSLVIKLNAT 267
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y + +D P+ + +++ + D+NDNAP F + + EN G
Sbjct: 413 LDRESASNYEVVVTARDGGSPSLSATASVSVEVADVNDNAPAFPQPEYTVFVKENNPPG 471
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
>gi|116110536|gb|ABJ74647.1| stan [Drosophila miranda]
gi|116110538|gb|ABJ74648.1| stan [Drosophila miranda]
gi|116110540|gb|ABJ74649.1| stan [Drosophila miranda]
gi|116110542|gb|ABJ74650.1| stan [Drosophila miranda]
gi|116110544|gb|ABJ74651.1| stan [Drosophila miranda]
gi|116110546|gb|ABJ74652.1| stan [Drosophila miranda]
gi|116110548|gb|ABJ74653.1| stan [Drosophila miranda]
gi|116110550|gb|ABJ74654.1| stan [Drosophila miranda]
gi|116110552|gb|ABJ74655.1| stan [Drosophila miranda]
gi|116110554|gb|ABJ74656.1| stan [Drosophila miranda]
gi|116110558|gb|ABJ74658.1| stan [Drosophila miranda]
gi|116110560|gb|ABJ74659.1| stan [Drosophila miranda]
gi|116110562|gb|ABJ74660.1| stan [Drosophila miranda]
gi|116110564|gb|ABJ74661.1| stan [Drosophila miranda]
gi|116110566|gb|ABJ74662.1| stan [Drosophila miranda]
gi|116110568|gb|ABJ74663.1| stan [Drosophila miranda]
gi|116110570|gb|ABJ74664.1| stan [Drosophila miranda]
Length = 549
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTSKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSACDPDIGLNGRIKYLLSDRDVE 238
>gi|345800788|ref|XP_546767.3| PREDICTED: cadherin-1-like [Canis lupus familiaris]
Length = 646
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDREK + Y L H A E I +T+TD NDN PEF + S++E
Sbjct: 134 LKVTKPLDREKKSHYVLFLHAVSSTGNAVEDTLEIVITVTDQNDNRPEFTQAVFEGSVME 193
Query: 62 NAEIG-SLSTVNAT 74
A G S+ + AT
Sbjct: 194 RAHPGTSVLQITAT 207
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
>gi|432953107|ref|XP_004085292.1| PREDICTED: uncharacterized protein LOC101161607, partial [Oryzias
latipes]
Length = 3143
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ Y + D P + ++T+ + D+NDNAP+F + + + EN+ +GS
Sbjct: 409 LDRENISVYNVTIKATDEGNPPLSSIHVLTVQVADVNDNAPKFTEPVINVYVKENSPVGS 468
Query: 68 L 68
+
Sbjct: 469 I 469
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LDREK A L D +P LIT+ + D+NDN P F + A++L
Sbjct: 2466 EMELRKALDREKQAVIKLTLTATDGGKPPKSGTLLITVNVQDVNDNIPVFDKALYKATVL 2525
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 2526 ENAAPGT 2532
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I++Y + D P V +I + ++DINDNAP F + + + EN+ IG
Sbjct: 1889 LDRERISQYNVTIVAADEGTPPLSSVIVIPIQVSDINDNAPIFLESVINVYVKENSAIGE 1948
Query: 68 L 68
+
Sbjct: 1949 I 1949
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ A Y + D P+ +I + ++D+NDN P F+ + + + EN E+G
Sbjct: 1083 LDRERHALYDIKITAHDEGSPSLSSTKVIKVEVSDVNDNPPRFSEPVINIYVKENGEVG 1141
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L+ D +P I +++ D+NDN P F+ + A +
Sbjct: 863 ELVLLKALDREKEPDIKLSLSAVDGGKPPNTGTVQIHISVLDVNDNTPSFSKTLYKARVK 922
Query: 61 ENAEIGSL 68
ENA GSL
Sbjct: 923 ENAPPGSL 930
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK TL D +P +T+ + D+NDN P F+ + A I
Sbjct: 189 ELVLKKALDREKEPVITLMLTAVDGGKPPRSGSLALTVNVVDVNDNTPVFSRSLYKARIK 248
Query: 61 ENAEIGSLST-VNAT 74
ENA+ G+L +NAT
Sbjct: 249 ENAKPGTLVVKLNAT 263
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y + D+ QP +++T+ ++D+NDNAP F + + EN G
Sbjct: 2686 LDREVASEYKIRITAADKGQPPLSTTAIVTVHVSDVNDNAPRFKEPEINIFVKENGPTGD 2745
Query: 68 L 68
+
Sbjct: 2746 V 2746
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D +PA +IT+ + D+NDN P F + A +
Sbjct: 1669 ELVLQKSLDREKNSAIRLTLSAIDGGKPARSGSLMITVNVLDVNDNTPVFDQPLYKAHVT 1728
Query: 61 ENAEIGS-LSTVNAT 74
ENA + + TV AT
Sbjct: 1729 ENAPFQTAILTVRAT 1743
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA--SVINSAS 58
E+ GLD E + Y ++ D+ + + + D+NDNAPE S++N
Sbjct: 971 EIAVKGGLDYESQSAYEVHVQATDKGASPRRANGKVLIEVVDVNDNAPEIVVTSLLN--P 1028
Query: 59 ILENAEIGSL 68
+ E+AE GS+
Sbjct: 1029 VKEDAESGSV 1038
>gi|410352051|gb|JAA42629.1| protocadherin gamma subfamily A, 12 [Pan troglodytes]
Length = 936
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 195 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 254
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 255 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 295
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 412 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 471
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 472 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 506
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 303 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 360
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 361 NSPRGTL 367
>gi|195576483|ref|XP_002078105.1| GD22718 [Drosophila simulans]
gi|194190114|gb|EDX03690.1| GD22718 [Drosophila simulans]
Length = 3385
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+
Sbjct: 773 QLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVA 832
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 833 ENASIGAM 840
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 1384 EIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 1442
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 1443 ENAEIGSF 1450
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I + +LE
Sbjct: 1287 GLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNTEVLE 1341
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 526 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 584
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 585 PIATEVVTVSA 595
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 94 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 151
Query: 59 IL 60
IL
Sbjct: 152 IL 153
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 1488 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 1544
Query: 62 NAEIGSLSTVNATIGVNR 79
+ S++ V I +R
Sbjct: 1545 LQQ--SIALVGQIIATDR 1560
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 1090 EISTATTLDREETPVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 1148
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 1149 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 1189
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 879 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 937
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 938 MENTVPPNGGYVLTVNA 954
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 991 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPA 1050
Query: 66 GS 67
G+
Sbjct: 1051 GT 1052
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 427 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 483
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 484 QVGQIVAKDADLGQN 498
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+ + Y L D P + + + L D+NDN P F + I
Sbjct: 2078 EISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFMPEGLNGYIS 2137
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2138 ENEPAGT 2144
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
TAR LDRE ARY L QDR P + + IT+ + D NDN P+F A++ E+
Sbjct: 1297 TARPLDREVHARYVLQITAQDRGSPTSQQGHCNITIRVEDENDNDPKFELQKYIATVDED 1356
Query: 63 AEIG----SLSTVNATIGVN 78
A++G ++ V+A IG+N
Sbjct: 1357 AQLGTTVLTVKAVDADIGIN 1376
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E + LN D PA+ + + + D+NDN PEF S S+ E
Sbjct: 293 IRVASTLDHETKPQVLLNIQATSGDPPAYGHTQ-VNIDIEDVNDNPPEFESSTVRISVPE 351
Query: 62 NAEIGS-LSTVNA 73
N EIGS L NA
Sbjct: 352 NVEIGSPLYAANA 364
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE RY + V D P + + +T+ D NDN+P F + I EN
Sbjct: 524 LDRELQERYNITVIVSDNGVPTLTATTHVIVTVLDANDNSPIFPKQLYEFEIEENMRRGS 583
Query: 65 -IGSLSTVNATIGVN 78
IG ++ +A G+N
Sbjct: 584 VIGQVTASDADTGIN 598
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L AR LD E R+ L D P I + + D+NDN P F S ++E
Sbjct: 399 LSLARPLDYETTQRHMLIVTASDSGIPLLSTNLTIMVEVQDVNDNPPIFEKTEYSIKVIE 458
Query: 62 ----NAEIGSLSTVNATIGVN-RCGHTFRGKDLR 90
N++I ++ V+A G N R + G D R
Sbjct: 459 STPSNSQIVQVTAVDADTGNNARLTYRILGDDQR 492
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KT LDRE +Y L D P + I + + D+NDN P F S++
Sbjct: 1725 VKTNIVLDREIRDKYKLKVIATDEGVPQMTGTATINVNIVDVNDNQPTFP----PNSVIS 1780
Query: 62 NAEIGSLSTVNATIGVN 78
+E +L TV TI N
Sbjct: 1781 VSEATNLGTVLTTITAN 1797
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
L+T LD E+ Y L D +P + V ++ + + D+NDN P F S
Sbjct: 730 LRTKVSLDHEEKTIYRLAVAATDNGKPPRQTVRVLRIEVLDLNDNRPTFTS 780
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETASGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSASDPDIGLNGRIKYLLSDRDVE 238
>gi|116110556|gb|ABJ74657.1| stan [Drosophila miranda]
Length = 549
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 251 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 310
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 311 NSPVGSV 317
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 151 LDRETTSGYLLTVTSKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 210
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDLR 90
+S + IG+N R + +D+
Sbjct: 211 SVIQVSACDPDIGLNGRIKYLLSDRDVE 238
>gi|410948477|ref|XP_003980965.1| PREDICTED: protocadherin beta-17-like [Felis catus]
Length = 765
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 406 LVTERALDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 465
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 466 NNSPALHIGSVSATDRDSGAN 486
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEFA ++ +
Sbjct: 196 ELVLDKALDREEQSELRLTLTALDGGSPPRTGTAQVLIVVLDINDNAPEFAQLLYEVQVP 255
Query: 61 ENAEIGSLS-TVNAT 74
EN+ +GSL TV AT
Sbjct: 256 ENSPVGSLVITVFAT 270
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y L D + +C I + + D+NDNAPE + + I
Sbjct: 303 EIRLKKTLDFEEIRSYRLEIEASDGGGLSGKCT--IAIEVMDVNDNAPELTMSVLISDIP 360
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGK 87
EN TV A G++ GK
Sbjct: 361 ENTP----DTVVAIFGISDPDSGENGK 383
>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
Length = 3222
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE+ + Y+L D P +L+ +TLTD NDN+P FA ASI E
Sbjct: 1774 IRTTRPLDREERSNYSLLITAADHGHPPLSSSALLHITLTDENDNSPLFARKSYRASISE 1833
Query: 62 NAEIGS 67
+G+
Sbjct: 1834 GLPVGT 1839
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE Y+L V DR +++++ + DINDNAP F+S A + EN+ +G
Sbjct: 2478 LDRETTDAYSLTVTVTDRGINPLNSSTVVSVKVLDINDNAPAFSSPEYHAQVSENSPVGL 2537
Query: 67 ---SLSTVNATIGVN 78
+S + +G N
Sbjct: 2538 VLVQVSAYDPDLGAN 2552
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ LDRE + +TL +D P+ + + ++ D NDNAP+F+ I E
Sbjct: 1673 ISTSVRLDREIQSTFTLRVQAEDSGTPSLSSTTTVLCSVLDENDNAPQFSQPDLHIVIPE 1732
Query: 62 NAEIGSLSTVNATIGVNRCGHT--FRGKDLRCYNL 94
N G + V A+ N T + +DL C+++
Sbjct: 1733 NLAPGVIHIVQASDIDNGLNGTIQYSIEDLECFSI 1767
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 27/60 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y L D P V + +TD+NDN P F I SI E+ +G+
Sbjct: 410 LDREIKDLYELTVTASDYGCPPLSSVITFQIQVTDVNDNPPVFHQTIYEESIDEDVRVGT 469
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y L +D + + + + D+NDN+P S + + +I E
Sbjct: 2151 LATNAVLDREIVSSYKLIIQAKDMGKAPLTGTCTVRVQVVDVNDNSPTIPS-MEAVTIAE 2209
Query: 62 NAEIGSLST 70
N +G + T
Sbjct: 2210 NLPLGYIVT 2218
>gi|426350340|ref|XP_004042735.1| PREDICTED: protocadherin gamma-B7 [Gorilla gorilla gorilla]
Length = 808
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAHVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
>gi|402913426|ref|XP_003919198.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Papio anubis]
Length = 365
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 135 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 194
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 195 NSPIGLAVARVTAT 208
>gi|348536028|ref|XP_003455499.1| PREDICTED: protocadherin-8 [Oreochromis niloticus]
Length = 982
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDREKI Y L +D P ++ + T+ +TD NDN P F+ + S+LEN
Sbjct: 413 TTTTLDREKIPEYNLTVVAEDLGSPPFKTIRQYTIRVTDENDNPPLFSKPLYEVSVLENN 472
Query: 64 EIGSLST 70
GS T
Sbjct: 473 IPGSYVT 479
>gi|296189194|ref|XP_002806522.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-8-like [Callithrix
jacchus]
Length = 1003
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+I Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIPEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-SVINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + ++ +A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFLHGAVADVELVYDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
>gi|270006422|gb|EFA02870.1| fat protein [Tribolium castaneum]
Length = 1781
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T + LDRE+I+ Y ++ +D+ P + + L + D+NDN+PEF + ++
Sbjct: 632 QLTTRKKLDREEISHYEIHVIAKDQGLPPQSSTATVYLNVIDVNDNSPEFYPLNYFVAVP 691
Query: 61 ENAEIGS 67
EN + GS
Sbjct: 692 ENVKPGS 698
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE Y+L+ D P+ V + + + D NDN+PEF + S +I E
Sbjct: 1041 LYVRQSLDREDKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSPEFTNASFSFNIRE 1100
Query: 62 NAE----IGSLSTVNATIGVN 78
N +G L+ + IG N
Sbjct: 1101 NEPPDSFVGKLTATDRDIGRN 1121
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T +DRE I + L D QPA +S L+T+ + D+NDNAP F S +NSA
Sbjct: 1469 IHTLLPIDRETIDTFRLTVVATDEAQPASARLSANKLVTVIVEDVNDNAPVFVS-MNSAI 1527
Query: 59 ILENAEI 65
+ +N +
Sbjct: 1528 LPQNTQF 1534
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I++Y L D+ P + + + + D+ND+ P F SA + E A G+
Sbjct: 426 LDREEISKYNLTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEYSAILSELAPSGT 485
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILE----N 62
LDRE ++ Y L +D Q + +++ + D NDN+PEF + S++E N
Sbjct: 1261 LDRETVSNYLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSKISVIETTPVN 1320
Query: 63 AEIGSLSTVNATIGVN 78
E+ +A +G+N
Sbjct: 1321 TELIQFRATDADLGMN 1336
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
+ LD E+++ Y LN D P L + + D NDN P F S
Sbjct: 1365 KPLDYEELSAYQLNITASDNGNPRLSTTILFAIAVEDANDNPPSFPS 1411
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 2 LKTARGLDREKIARYT------LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
+KT DRE++ + T L A V D P + + +TD+NDN P+F
Sbjct: 1144 IKTLHVFDREELVQTTGLNYLSLEATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPY 1203
Query: 56 SASILENAEIGS----LSTVNATIGVN 78
+ E + +G+ L T +A G+N
Sbjct: 1204 RVQVSEGSPVGTQVIRLFTSDADEGLN 1230
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E++T LDRE + RY L V QP + + + + DINDN PEF S S
Sbjct: 83 EIRTNAVLDRENLKNDRYDL---VVLSSQPTYPIE--VRILVLDINDNPPEFPEPSISVS 137
Query: 59 ILENAEIGSLSTVNAT----IGVNRCGHTFR 85
E+A G+ ++A IG N +R
Sbjct: 138 FSESAAAGTRLLLDAATDKDIGTNGVSDDYR 168
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 970 LDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 1029
Query: 68 ----LSTVNATIGVN 78
+S + IG+N
Sbjct: 1030 SVIQVSASDPDIGLN 1044
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1070 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 1129
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1130 NSPVGSV 1136
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ +R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 751 VQTIKQLDREEQSRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGE 810
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 811 DQPQGTPVTTVTAT 824
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 645 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 704
Query: 61 ENAEIG 66
EN +G
Sbjct: 705 ENVPVG 710
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 37/73 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y+ +D P + LT++DINDNAP F V ASI+E
Sbjct: 589 LWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIME 648
Query: 62 NAEIGSLSTVNAT 74
N G L V AT
Sbjct: 649 NEPPGKLLQVTAT 661
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE + Y L +V D+ P+ + + + +TD+NDN+P F S +A+I E
Sbjct: 377 IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISE 436
Query: 62 NAEIGS-LSTVNAT 74
A+ GS + +NAT
Sbjct: 437 LAQNGSYVLQLNAT 450
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 31/63 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LDRE Y LN DR PA LI +T+ D ND+AP F SI EN
Sbjct: 160 TKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENT 219
Query: 64 EIG 66
+ G
Sbjct: 220 KPG 222
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA+ LDRE+++ T+ QD + +T+T+ D NDN P F +I E
Sbjct: 482 VTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISE 541
Query: 62 NAEIGS 67
A IG+
Sbjct: 542 GASIGA 547
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE + Y L D + I +T+ D ND P F + +I
Sbjct: 1215 ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNIT 1274
Query: 61 ENAEIGSL 68
E+A IGSL
Sbjct: 1275 EDALIGSL 1282
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LD E Y L QD +T+ + D+NDNAP F + + ++ E
Sbjct: 1321 LIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRE 1380
Query: 62 NAEIGSLSTVNATIGVNRCGHTFR 85
N VN V RC + R
Sbjct: 1381 N--------VNTGFPVGRCTASDR 1396
>gi|62510872|sp|Q5DRB9.1|PCDGC_PANTR RecName: Full=Protocadherin gamma-A12; Short=PCDH-gamma-A12; Flags:
Precursor
Length = 932
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 293
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 469
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 470 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 504
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>gi|410948479|ref|XP_003980966.1| PREDICTED: protocadherin beta-10 [Felis catus]
Length = 660
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T GLDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 402 LMTEGGLDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 62 N----AEIGSLSTVN 72
N IGS+S +
Sbjct: 462 NNSPALHIGSVSATD 476
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK +L D P + I + + DINDNAP+F+ +
Sbjct: 192 ELVLDKALDREKQHELSLTLTALDGGSPPRSGTTTIRIVIVDINDNAPQFSQTMYETQAP 251
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 252 ENSPVGSL 259
>gi|410306230|gb|JAA31715.1| protocadherin gamma subfamily B, 6 [Pan troglodytes]
Length = 927
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
>gi|296531412|ref|NP_001076036.2| protocadherin gamma-A12 [Pan troglodytes]
Length = 934
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 195 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 254
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 255 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 295
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 412 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 471
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 472 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 506
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 303 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 360
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 361 NSPRGTL 367
>gi|426231041|ref|XP_004009557.1| PREDICTED: protocadherin beta-16 [Ovis aries]
Length = 752
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERTLDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDTDAGAN 483
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + + + + DINDNAP+F ++ I
Sbjct: 193 ELVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDINDNAPQFQQLLYKVHIP 252
Query: 61 ENAEIGSL-STVNAT 74
EN+ +GSL TV+A+
Sbjct: 253 ENSPVGSLVVTVSAS 267
>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 3233
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ + LDRE+ + YTL +DR +P+ + +T+ + D NDN+P F SA++ E
Sbjct: 325 LRVSGPLDREQKSNYTLAVIARDRGEPSRSSSTNVTVMVLDENDNSPVFDPRQYSATVAE 384
Query: 62 NAEIGS 67
NA IG+
Sbjct: 385 NASIGA 390
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A G D E Y V+D D PA + V + + +TD NDNAP + I +A++L
Sbjct: 853 EVVVASGFDYETAPYYEAWIEVRDSDTPALQSVLQLLVNVTDANDNAPVMEAAIYNATVL 912
Query: 61 EN 62
EN
Sbjct: 913 EN 914
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++T LDREKIA Y L D+ P + + +T+ D NDN P F + S ++
Sbjct: 957 QIETNAELDREKIASYELVVEATDQGHPRLTGTTTVLVTVLDKNDNPPHFTRLF-SVNVT 1015
Query: 61 ENAEIGSL 68
ENAEIG+
Sbjct: 1016 ENAEIGTF 1023
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ R LDRE + YTL D P ++ + + D+ND+ PEF A+++
Sbjct: 540 DISLLRSLDRELMPEYTLTLVAMDTGSPPLTGSGIVRIIVLDVNDHNPEFNRQDYKATVM 599
Query: 61 ENAEIGSLST 70
EN G+ T
Sbjct: 600 ENMPAGTWVT 609
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+++TA+ LDRE + Y L D P + + + L D+NDN P F +
Sbjct: 1699 DIETAKQLDRETMPAYDLTIGAIDTGSPPQTGTATVHIDLLDVNDNGPVFDPPEVIGYVS 1758
Query: 61 ENAEIG----SLSTVNATIGVNRCGHTFR 85
EN G +LS + + N T++
Sbjct: 1759 ENEPAGTIVMTLSATDPDLPPNGAPFTYK 1787
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E++ Y L D P + + D+NDNAP + ++A I+ENA IG+
Sbjct: 122 LDYEQVQHYILVVQATDGGVPVLSSTVTVYCNVVDLNDNAPIVETGPHAADIVENATIGT 181
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
L T R LDRE+ Y L V D P +S +T+ L D+ND +PEF S S
Sbjct: 220 LFTRRLLDRERKPLYNLALSVTDSPLPPARPLSSTVQVTVVLLDVNDMSPEFISPTR-IS 278
Query: 59 ILENA 63
I+ENA
Sbjct: 279 IIENA 283
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L A LDRE +Y L D Q ++ + +TD NDNAP F S S I
Sbjct: 12 QLTLAEALDRETKEKYVLRVRADDGLQ---HRDIVLNIQVTDTNDNAPTFQSTAYSFDIP 68
Query: 61 ENAEIGS 67
EN GS
Sbjct: 69 ENVPRGS 75
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LDRE+ Y L D AW + +T+T+ D NDNAPEF
Sbjct: 1067 LDREEQDEYLLKVVAADG---AWLTETALTITIQDQNDNAPEF 1106
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 1 ELKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
E+ T LDRE+ A Y TL A +P V+L T+ + D+NDNAP F+S
Sbjct: 644 EVFTTVPLDREQTAVYHLTLVARDSSPTEPRASTVNL-TILVMDVNDNAPRFSS 696
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD + + Y LN D + V+ + + ++DINDN P F I A + EN+
Sbjct: 1386 KPLDYDLVQEYQLNITATDLGFEPKQAVATLIVNVSDINDNPPTFNQSIYEAFLPENSPS 1445
Query: 66 GSL 68
S
Sbjct: 1446 DSF 1448
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L QD QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1110 LDREERDYYALTVSCQDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1169
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1170 FVGKLTAVDRDIGRN 1184
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+
Sbjct: 2228 QLRVVDALDRELRSSYLLNITARDRGEPPQATETQLLIRILDENDNSPVFDPKQYSASVA 2287
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2288 ENASIGAM 2295
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2766 GLDYELTHLYEIWVEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLE 2820
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN VQD V+++T+ LTD+NDN P F I EN +G+
Sbjct: 3291 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFDQKEYHGYIPENKPVGT 3350
Query: 68 L 68
Sbjct: 3351 F 3351
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2863 EIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2921
Query: 61 ENAEIGSL 68
EN EIGS
Sbjct: 2922 ENTEIGSF 2929
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1549 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1606
Query: 59 IL 60
IL
Sbjct: 1607 IL 1608
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1981 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 2039
Query: 64 EIGS-LSTVNA 73
+ + + TV+A
Sbjct: 2040 PLATEVVTVSA 2050
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 452 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ + +
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFAM 544
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDREK++RY + +D+ P + + + L + D+NDN P+F
Sbjct: 658 QLTTRRPLDREKMSRYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ + Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2545 EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 2603
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2604 VPERISQGEFVFGARALDLDDGENAVVHYTLSGRDQHYFDI 2644
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E++ARY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2334 VRVAKNLNYERLARYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2392
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2393 MENTVPPNGGYVLTVNA 2409
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+IA Y L D P + + + L D+NDN P F + + +
Sbjct: 3601 EISTASRLDREEIATYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTTEGLNGYVS 3660
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3661 ENEPPGT 3667
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2967 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 3023
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2446 KPLDREQQREYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPA 2505
Query: 66 GS 67
G+
Sbjct: 2506 GT 2507
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1882 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1938
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1939 QVGQIVARDADLGQN 1953
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS 67
A G+
Sbjct: 282 TALPGT 287
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L AR LDRE + L +D P S +T+ + D NDNAPEF + S
Sbjct: 1333 QLSLARRLDRESQEIHHLVVVAKDAALKHPLSSNAS-VTIVVLDENDNAPEFTQSSSEVS 1391
Query: 59 ILENAEIGS 67
+LE + G+
Sbjct: 1392 VLETSPTGT 1400
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE++ RY LN + D+ P L+T+ + D NDN P F SA + EN+ IGS
Sbjct: 772 LDREQLDRYFLNITIYDQGIPTMSSWRLLTVIIEDANDNDPRFYQDNYSAVVAENSAIGS 831
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+TA +DRE + Y L A Q D C S I+L + D+NDNAP F+S AS+
Sbjct: 3084 ELRTATVMDRELVPTYNLIA--QATDGGGLFCRSDISLKVLDVNDNAPLFSSTHYLASVY 3141
Query: 61 ENAEIGSLST 70
ENA +L T
Sbjct: 3142 ENAAPKALLT 3151
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE ++ YTL+ D PA + + ++D+NDN P FA ++A I
Sbjct: 3399 LKVNKKLDRELVSMYTLSVQAFDSGSPAMSTRVTVNIDISDVNDNPPVFAPPNSTAVIQL 3458
Query: 62 NAEIGS 67
N G+
Sbjct: 3459 NQVAGT 3464
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E Y + D P +++ + L D+NDNAP F + + I E
Sbjct: 3294 ISVADDLDFEVCKDYYITVEAWDSGNPPLSTATMVVIELMDVNDNAPTFDQDVYNVLISE 3353
Query: 62 NAEIGSLST 70
+A +G T
Sbjct: 3354 DASVGQTVT 3362
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 6 RGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+ LDRE Y + A DR Q A +T+ + D+NDNAP F + +I E+
Sbjct: 3191 KSLDRESQESYRIRAQATDRVGQQGAMSSQVDLTILVLDVNDNAPVFQKRDYAVTIPEDV 3250
Query: 64 EIGS----LSTVNATIGVN 78
+G+ + +A IG N
Sbjct: 3251 AVGTEVLRVLATSADIGPN 3269
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LD E ++ L V+D++ P ++ I + + DINDN P F A + E +
Sbjct: 1502 TADRLDYEARTQHILTVMVKDQEFPFNRDLARIVVAVEDINDNVPFFTRTTYDAVVYETS 1561
Query: 64 EIG 66
G
Sbjct: 1562 PAG 1564
>gi|301753491|ref|XP_002912591.1| PREDICTED: protocadherin gamma-C5-like isoform 2 [Ailuropoda
melanoleuca]
gi|281345410|gb|EFB20994.1| hypothetical protein PANDA_000351 [Ailuropoda melanoleuca]
Length = 944
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + D+NDNAP F S + +
Sbjct: 193 ELVLEQQLDREAQARHHLVLTAVDGGIPARSGTTLISVIVLDVNDNAPTFQSSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPVGTLLLRLNAT 267
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDRETTSHYIIELLASDAGSPPLHAHLTIRLNISDVNDNAPYFTQQLYTAYIPE 465
Query: 62 NAEIGSLSTVNA 73
N GSL + A
Sbjct: 466 NRPPGSLLCIVA 477
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ + Y ++A +D+ QPA E +I + + D NDNAPE AS++N ILE+ +
Sbjct: 308 IDFEESSFYEIHARARDQGQPAMEGHCMIQVEVGDANDNAPEVLLASLVN--PILESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
Length = 5024
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+
Sbjct: 2107 QLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVA 2166
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2167 ENASIGAM 2174
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 989 LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1048
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1049 FVGKLTAVDRDIGRN 1063
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2645 GLDYELTHLYEIWVEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLE 2699
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2742 EIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2800
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2801 ENAEIGSF 2808
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN VQD V+++T+ LTD+NDN P F I EN +G+
Sbjct: 3170 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFDQREYHGYIPENKPVGT 3229
Query: 68 L 68
Sbjct: 3230 F 3230
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1860 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 1918
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 1919 PIATEVVTVSA 1929
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 446 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 505
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 506 FVASITATDEDTGVNAQVHYDILSGNELKWFSM 538
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1428 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1485
Query: 59 IL 60
IL
Sbjct: 1486 IL 1487
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ A Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2424 EISTATTLDREETAVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTHYNVA 2482
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2483 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 2523
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2846 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 2902
Query: 62 NAEIGSLSTVNATIGVNR 79
+ S++ V I +R
Sbjct: 2903 LQQ--SIALVGQIIATDR 2918
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+I+ Y L D P + + + L D+NDN P F + + I
Sbjct: 3480 EISTASRLDREEISTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTTEALNGYIS 3539
Query: 61 ENAEIGS 67
EN G+
Sbjct: 3540 ENEPPGT 3546
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2213 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2271
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2272 MENTVPPNGGYVLTVNA 2288
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2325 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELHSYHATVRENLPA 2384
Query: 66 GS 67
G+
Sbjct: 2385 GT 2386
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1761 LDRETKSKYELRIRVSDGVQ---YTETYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1817
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1818 QVGQIVARDADLGQN 1832
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGTPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS-LSTVNAT 74
A G+ ++TV A+
Sbjct: 282 TALPGTPVATVMAS 295
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L AR LDRE + L +D P S IT+ + D NDNAPEF + S
Sbjct: 1212 QLSLARRLDRESQEIHHLIVVAKDAALKHPLSSNAS-ITIVVLDENDNAPEFTQSSSEVS 1270
Query: 59 ILENAEIGS 67
+LE + G+
Sbjct: 1271 VLETSPTGT 1279
>gi|344265078|ref|XP_003404614.1| PREDICTED: protocadherin gamma-A10-like [Loxodonta africana]
Length = 819
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE ++ Y + D P +TL + DINDN P F+ V S I E
Sbjct: 404 LVTDRALDRELVSSYNITVTATDGGSPPLSTEIHLTLHVADINDNPPAFSYVSYSTYIPE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N IG S+ +V NA + + T RG L Y
Sbjct: 464 NNPIGVSIFSVTAHDPDSEKNARVTYSLTEDTIRGAPLSSY 504
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P +L+++T+ D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAMHHLVLTASDGGDPLRSGTALVSVTVFDTNDNAPVFTLPEYQVSVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENLPVGTRLLTVTAT 267
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E+ Y + +Q D A+ + + +T+ D+NDN+PE + + +
Sbjct: 300 EIKISENLDYEETDSYEI--EIQAEDGGAYLATAKVLITVEDVNDNSPEVTTTSVFSPVT 357
Query: 61 ENAEIGSL 68
E++ G++
Sbjct: 358 EDSPPGTV 365
>gi|354492215|ref|XP_003508246.1| PREDICTED: protocadherin gamma-C5-like [Cricetulus griseus]
Length = 968
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA SLI++ + DINDNAP F S + +
Sbjct: 190 ELVLEQQLDREAQARHQLVLTAMDGGTPARSGTSLISVIVLDINDNAPAFQSSVLRVGLP 249
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ L +NAT
Sbjct: 250 ENTPPGTLLLRLNAT 264
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE Y ++ D P I L ++D NDNAP F + +A I E
Sbjct: 403 LLTSQPLDREATPHYIIDLLASDAGSPPLHTHLTIRLNISDANDNAPHFTHQLYTAYIPE 462
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 463 NRPPGSLLCTVAAS 476
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D NDN PE AS++N +LE+ +
Sbjct: 305 VDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVN--PVLESTPV 362
Query: 66 GSL 68
G++
Sbjct: 363 GTV 365
>gi|334311071|ref|XP_001377418.2| PREDICTED: protocadherin beta-1 [Monodelphis domestica]
Length = 970
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D PA + I + + D+NDN P+F+ ++ A IL
Sbjct: 299 ELVLIKPLDREEQPQVCLTLTAVDGGSPAKSGTAQILIVVLDVNDNVPQFSRLVYRAQIL 358
Query: 61 ENAEIGSLST-VNATI---GVNR 79
EN+ GSL T V+AT G NR
Sbjct: 359 ENSPNGSLVTSVSATDLDEGTNR 381
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDREK+A Y L D P ++I + ++DINDN P F + ++ E
Sbjct: 510 LVTGGTLDREKVAGYNLTIVAMDSGTPRLSSETIIEVVISDINDNPPVFKEASYTMTVRE 569
Query: 62 N 62
N
Sbjct: 570 N 570
>gi|449475300|ref|XP_004175474.1| PREDICTED: uncharacterized protein LOC100229528 [Taeniopygia
guttata]
Length = 1696
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T LDRE+ A Y + D + I + ++D+NDN PEF + + S+
Sbjct: 403 ELRTNAALDRERTAEYNITITAMDWGRKRLSSQETIFVKISDVNDNPPEFTQEVYTMSVP 462
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN IGS+ +A G+N
Sbjct: 463 ENNSPMLRIGSMKATDADAGIN 484
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LDRE++ Y + +D PA + + L D+NDNAP F I + I E
Sbjct: 1284 LVTSETLDREQVEEYNVTVRARDEGSPALSASKTLFVRLLDVNDNAPTFTQAIYTMVISE 1343
Query: 62 NAEIG-SLSTVNAT 74
N G SL ++AT
Sbjct: 1344 NEPAGRSLGHLSAT 1357
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A D P +LI + + D NDN P F + S++
Sbjct: 1073 ELVLDRALDREQQAEVAFIITAGDGGNPPRSGTALIRVIVLDTNDNIPVFTQSLYKVSVM 1132
Query: 61 ENA 63
EN+
Sbjct: 1133 ENS 1135
>gi|326935583|ref|XP_003213849.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Meleagris gallopavo]
Length = 976
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE + Y+ QD+ P + +++T+ D+NDN+PEF SA + E+A
Sbjct: 241 ASELDREAVDFYSFGVEAQDQGSPPMASSASVSVTVLDVNDNSPEFTQREYSARLNEDAA 300
Query: 65 IG-SLSTVNA 73
+G S+ TV+A
Sbjct: 301 VGTSVLTVSA 310
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASIL 60
L LD E +TL QD +P +S L+T+ + D+NDNAP F S A++L
Sbjct: 132 LDVVTPLDYEASKEFTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVL 191
Query: 61 ENAEIG 66
EN +G
Sbjct: 192 ENVPVG 197
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ D+ PA I +T+ D+NDN P F + E
Sbjct: 549 VRTLRRLDRENVPLYALRAYAVDKGVPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEE 608
Query: 62 NAEIG 66
N+ IG
Sbjct: 609 NSPIG 613
>gi|326431776|gb|EGD77346.1| PRCDH1 protein [Salpingoeca sp. ATCC 50818]
Length = 9674
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E Y N HV+DR PA + + +T+TD NDNAP FA + ++ +
Sbjct: 1263 ISAAVPLDYETRRTYAFNVHVEDRGVPARRDTATVVITVTDSNDNAPAFAQMTYVGAVSD 1322
Query: 62 NAEIGS-LSTVNAT 74
A GS + TV+AT
Sbjct: 1323 IAAGGSTILTVSAT 1336
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE+ +TL +DR P+ + + +TD+ND+ P+F ++ + SI
Sbjct: 318 QITTTASLDREQQPSWTLTVEARDRGVPSLSATVQVVIGVTDVNDHVPQFFNLPYACSI- 376
Query: 61 ENAEIG 66
N E G
Sbjct: 377 -NGETG 381
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE A Y L D P +T+ + D+NDN P F S + S+ E
Sbjct: 5260 ITVASALDRETFATYQLLVQATDNGMPPNVGSVEVTIRIDDVNDNTPAFPSGTATTSLSE 5319
Query: 62 NAEIGSLST 70
+A G+L T
Sbjct: 5320 SAANGTLIT 5328
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G+D E ++YT+ +D P+ V + +T+ D NDN P F S I EN G
Sbjct: 846 GIDYEVKSQYTVYVEAKDEGAPSRRDVVPVYITVNDTNDNPPIFPKTNYSCVIPENLPAG 905
Query: 67 SL-STVNAT 74
+ +TV AT
Sbjct: 906 QVCTTVFAT 914
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LD E+ +TL +D P + + + +TD+NDN+P+F +A+++E
Sbjct: 216 VSVATQLDYERNRTHTLVIEARDGGTPTRTGNTTLFIEVTDVNDNSPQFTKASYTANVIE 275
Query: 62 NAEIGS 67
N + G+
Sbjct: 276 NLDAGT 281
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A++ L QD+ P + +++ + D+NDN P F + + A +
Sbjct: 7183 LDREARAQFVLTVQAQDQTFPFHTTTATVSVIVEDVNDNHPMFGPALQGDATFYPANTSN 7242
Query: 68 LSTVNATI 75
L+ A +
Sbjct: 7243 LAHYEANV 7250
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LD E ++++LN D P + + D+NDNAP F + E+A +
Sbjct: 5161 KSLDFETRSQFSLNVSASDSGTPVHTTYITAIIFVADVNDNAPVFNQTSYEVHVSEDASV 5220
Query: 66 GSLS 69
G L+
Sbjct: 5221 GDLA 5224
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 2 LKTARGLDREKI----ARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
L AR LD E+ ++ + V D VSL+T+T+TD++D AP FA+ SA
Sbjct: 3263 LTLARALDYEQANGQPRQFVMGVQVADAG--GKTDVSLLTITVTDVDDEAPVFANTEYSA 3320
Query: 58 SILENAEIGS 67
+ + +G+
Sbjct: 3321 VVHDGVAVGA 3330
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP--EFASVINSASI 59
L + DRE A + V D A S++ +T+TD+NDNAP +FA + + +
Sbjct: 1681 LASGAAFDRELAADRNITLTVMASDGVAQSSASIV-VTITDVNDNAPVLQFADGL-TVEL 1738
Query: 60 LENAEIGSLS-TVNAT 74
EN +GS++ TV AT
Sbjct: 1739 PENTPLGSVAYTVQAT 1754
>gi|262263263|tpg|DAA06566.1| TPA_inf: protocadherin alpha 7 unspliced isoform [Anolis
carolinensis]
Length = 815
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LDRE +A Y L QD+ P+ S + + ++DINDNAP FA + + E
Sbjct: 409 LVVAEHLDREHMAEYELMVMAQDQGVPSLSGSSTVVVPISDINDNAPGFAQPAYTVFVKE 468
Query: 62 NAEIGS-LSTVNA 73
N G+ + TV+A
Sbjct: 469 NNPPGAHIFTVSA 481
>gi|27697111|gb|AAH41794.1| Fat1 protein [Mus musculus]
Length = 1209
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 12 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 71
Query: 61 ENAEIG 66
EN +G
Sbjct: 72 ENKPVG 77
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE + Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3079 ELKTSLPLDREILEVYHL--MVKATDGGGRFCQAAVELTLEDVNDNAPEFSADPYTVTVY 3136
Query: 61 ENAEIGS----LSTVNATIGVNR 79
EN E + + ++A +G+N
Sbjct: 3137 ENTEPQTPLLRVQAIDADLGLNH 3159
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL +D QP + + + ++D+NDN P F+ S I
Sbjct: 3392 EVKVNKLLDRELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVIQ 3451
Query: 61 ENAEIG 66
EN +G
Sbjct: 3452 ENKPVG 3457
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + ++ L V+D+D P + I + +TD ND+AP F S + E
Sbjct: 1515 LYTTEKLDHETMQQHILTVMVRDQDVPVLRNFARIVINVTDTNDHAPWFTSSFYEGRVYE 1574
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1575 SAAVGS 1580
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +Y LN V D P L+ + + D+NDN PEF S + E
Sbjct: 775 LKILSPLDRELKDQYNLNITVYDLGIPQKSSWRLLDVNVLDVNDNPPEFLQESYSVHLKE 834
Query: 62 NAE----IGSLSTVNATIGVN 78
N E I + V+ +GVN
Sbjct: 835 NEEGHNAIIQVQAVDKDLGVN 855
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + DR I + + D+NDNAP+ + ++E
Sbjct: 1092 IRTADNLDRETTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVME 1151
Query: 62 NA 63
N+
Sbjct: 1152 NS 1153
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR RY L D P ++ I + +T N+ AP+F S+ I E
Sbjct: 1620 IKTAKELDRNNHGRYELVVKATDHGIPPLSQITSIHIFVTISNNAAPKFTKKEYSSEISE 1679
Query: 62 NAEIGSL 68
A +GS
Sbjct: 1680 TAHVGSF 1686
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + + L + D PA V+ + + + D NDN P+F
Sbjct: 1200 TSRKLDREQQSEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQF 1246
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE+ + L V D +P L+ +T+ D+NDN P F ++ A + +A
Sbjct: 2036 TGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVEDVNDNNPVFVNLPYYAMVQIDA 2095
Query: 64 EIGSL----STVNATIGVN 78
G L + V+ IG N
Sbjct: 2096 PEGHLIRHVTAVDRDIGKN 2114
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+K LDREK + L +D+ ++P L+ +T+ D+NDN P F +
Sbjct: 878 IKAVAPLDREKQHTHLLKIEARDQAENEPQLFSHVLLKVTVEDVNDNPPVFIPSNYHVKV 937
Query: 60 LENAEIGSLST 70
E+ +G++ T
Sbjct: 938 REDLPVGTVIT 948
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LD EK +Y + D S I +T+ D+NDN P F + I ++ E+
Sbjct: 2877 LDHEKTNKYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRFTAEIYKGTVSED 2931
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LD E TL D P + + LTD+NDN P F + I E
Sbjct: 2343 IETAKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQVYEVKISE 2402
Query: 62 NAEIGSLST-VNAT 74
++ G T V AT
Sbjct: 2403 LSKPGHFVTCVKAT 2416
>gi|426350366|ref|XP_004042748.1| PREDICTED: protocadherin gamma-A12 [Gorilla gorilla gorilla]
Length = 821
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 61 ENAEIGS-LSTVNAT---IGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFK 293
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 469
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 470 SLISVTAHDPDCEENAQITYSLAENTIQGARLSSY 504
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPELVLTSLASSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>gi|426350324|ref|XP_004042727.1| PREDICTED: protocadherin gamma-C5-like isoform 1 [Gorilla gorilla
gorilla]
Length = 932
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F ++
Sbjct: 193 ELVLERALDREKKEIHQLVLVACDGGDPIHSGNLHIQVIVLDANDNPPMFTQPEYRVTVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITVTSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
Length = 14186
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ TL D P I +T+ D NDNAP F + ASI+
Sbjct: 12761 EMVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVYKASIM 12820
Query: 61 ENAEIGS-LSTVNAT 74
EN +IGS + TVNAT
Sbjct: 12821 ENTKIGSNVVTVNAT 12835
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ TL D P I +T+ D NDNAP F + ASI+
Sbjct: 13571 EMVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVYKASIM 13630
Query: 61 ENAEIGS-LSTVNAT 74
EN +IG+ + TVNAT
Sbjct: 13631 ENTKIGTNVVTVNAT 13645
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
DRE +++Y + D P + + L ++D+NDNAP F SA I+EN G
Sbjct: 12978 FDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGT 13037
Query: 67 SLSTVNA 73
S+ TV+A
Sbjct: 13038 SIFTVSA 13044
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE + Y + D P V ++ + + DINDN P F A+ILE
Sbjct: 11491 LVTDGPLDREFQSEYNITITATDAGSPPLASVKILKIVVNDINDNPPTFTQREYDANILE 11550
Query: 62 NAEIGSL 68
N +G+
Sbjct: 11551 NQPVGTF 11557
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
DRE +++Y + D P + + L ++D+NDNAP F SA I+EN G+
Sbjct: 13788 FDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGT 13847
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +I +T+ D NDNAP F+ + AS+
Sbjct: 7347 ELVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 7406
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 7407 ENSPVDTVVMQVSATDADEGVN 7428
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +I +T+ D NDNAP F+ + AS+
Sbjct: 8136 ELVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 8195
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 8196 ENSPVDTVVMQVSATDADEGVN 8217
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P + I +T+ D NDNAP F + A++
Sbjct: 1871 ELVLDKELDREKEQNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKANLP 1930
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++S +A GVN
Sbjct: 1931 ENAALGTVVLTVSASDADEGVN 1952
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +I +T+ D NDNAP F+ + AS+
Sbjct: 10497 ELVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 10556
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 10557 ENSHLDTVVMQVSATDADEGVN 10578
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P + I +T+ D NDNAP F + A +
Sbjct: 252 ELVLDKELDREKEQNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKADLP 311
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++S +A GVN
Sbjct: 312 ENAALGTVVLTVSASDADEGVN 333
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P + I +T+ D NDNAP F + A +
Sbjct: 2660 ELVLDKELDREKEQNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKADLP 2719
Query: 61 ENAEIG----SLSTVNATIGVN 78
ENA +G ++S +A GVN
Sbjct: 2720 ENAALGTVVLTVSASDADEGVN 2741
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +I +T+ D NDNAP F+ + AS+
Sbjct: 5903 ELVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 5962
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 5963 ENSPLDTVVMQVSATDADEGVN 5984
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +I +T+ D NDNAP F+ + AS+
Sbjct: 8911 ELVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 8970
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 8971 ENSPLDTVVMQVSATDADEGVN 8992
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 2082 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 2141
Query: 62 NAEIGSL 68
N GS+
Sbjct: 2142 NNRAGSI 2148
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 10708 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLNLSVADINDNPPVFEEESYSAYVSE 10767
Query: 62 NAEIGS 67
N GS
Sbjct: 10768 NNRAGS 10773
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE R +L D P I + + D NDNAP F + A++
Sbjct: 11965 EMVIEKSLDRETQPRLSLKLLAVDGGNPQRSGTVNIDVDILDANDNAPVFNQSLYKATVT 12024
Query: 61 ENAEIGSL-STVNAT 74
ENA G+L TVNA+
Sbjct: 12025 ENAPKGTLIMTVNAS 12039
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 463 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 522
Query: 62 NAEIGS 67
N GS
Sbjct: 523 NNRAGS 528
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 1240 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEKESYSAYVSE 1299
Query: 62 NAEIGS 67
N GS
Sbjct: 1300 NNRAGS 1305
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 2871 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 2930
Query: 62 NAEIGS 67
N GS
Sbjct: 2931 NNRAGS 2936
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 3706 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 3765
Query: 62 NAEIGS 67
N GS
Sbjct: 3766 NNRAGS 3771
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 4509 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 4568
Query: 62 NAEIGS 67
N GS
Sbjct: 4569 NNRAGS 4574
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 5325 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 5384
Query: 62 NAEIGS 67
N GS
Sbjct: 5385 NNRAGS 5390
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 6114 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 6173
Query: 62 NAEIGS 67
N GS
Sbjct: 6174 NNRAGS 6179
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 6769 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 6828
Query: 62 NAEIGS 67
N GS
Sbjct: 6829 NNRAGS 6834
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 7558 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 7617
Query: 62 NAEIGS 67
N GS
Sbjct: 7618 NNRAGS 7623
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 8347 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 8406
Query: 62 NAEIGS 67
N GS
Sbjct: 8407 NNRAGS 8412
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 9122 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 9181
Query: 62 NAEIGS 67
N GS
Sbjct: 9182 NNRAGS 9187
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y + D P + L++ DINDN P F SA + E
Sbjct: 9919 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 9978
Query: 62 NAEIGS 67
N GS
Sbjct: 9979 NNRAGS 9984
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + D P +I +T+ D NDNAP F+ + AS+
Sbjct: 1030 ELLLDKELDREDQKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 1089
Query: 61 ENAEIGS----LSTVNATIGVNR 79
EN+ + + +S +A GVNR
Sbjct: 1090 ENSPLDTVVMQVSATDADEGVNR 1112
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ L D P +I +T+ D NDNAP F+ + SA++
Sbjct: 9708 ELLLEKELDREEQKDMKLKLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQALYSATLP 9767
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLF 95
EN+ + ++S +A G+N + F + N+F
Sbjct: 9768 ENSSMNTPVITVSATDADEGINGEVTYEFSRISEKSRNMF 9807
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE A + L + D PA + + + + D NDN P F+ + A ++
Sbjct: 11280 ELVLKKALDRETQAEHVLRINGIDGGSPARSGTASVHVRVLDANDNVPVFSQRVYKAFVM 11339
Query: 61 ENAEIGSLST-VNAT 74
EN+ G++ T +NAT
Sbjct: 11340 ENSARGTVITRLNAT 11354
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + +L D P I + + D NDN P F+ + AS+
Sbjct: 4298 ELVLNKELDRESLKEMSLILTALDGGSPQRSGSVKIHINVLDANDNVPVFSQAVYKASLQ 4357
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G +L+ +A GVN
Sbjct: 4358 ENSPVGTLILTLTATDADEGVN 4379
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + D P +I +T+ D NDNAP F+ + AS+
Sbjct: 3496 ELLLDKELDREDQKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 3555
Query: 61 ENAEIGS----LSTVNATIGVNR 79
EN+ + + +S +A GVN+
Sbjct: 3556 ENSPLDTVVMQVSATDADEGVNK 3578
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + D P +I +T+ D NDNAP F+ + AS+
Sbjct: 5115 ELLLDKELDREDQREMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVYKASLP 5174
Query: 61 ENAEIGS----LSTVNATIGVN 78
EN+ + + +S +A GVN
Sbjct: 5175 ENSPLDTVVMQVSATDADEGVN 5196
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE ++ + D P + + ++D+NDNAP F+ A + E
Sbjct: 12176 LTTAAALDRETLSECNITILALDGGSPPLHTRRTLFVKVSDVNDNAPSFSYASYKAFLTE 12235
Query: 62 NAEIG-SLSTVNA 73
N G S+ VNA
Sbjct: 12236 NNSPGASVIIVNA 12248
>gi|345328633|ref|XP_001506924.2| PREDICTED: protocadherin alpha-11-like [Ornithorhynchus anatinus]
Length = 851
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DREK+A Y L +D PA E + +++ + D+NDNAP FA + + EN GS
Sbjct: 414 VDREKVAAYELLVTARDGGDPALEATASVSVAIADVNDNAPAFAQPAYTVLVKENNPPGS 473
Query: 68 -LSTVNA 73
+ TV+A
Sbjct: 474 HIFTVSA 480
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ L D +P + + +T+ D+NDN PEF + ENA
Sbjct: 200 KSLDREETPELHLLLKATDGGKPELTGTTQLVVTVLDVNDNDPEFEHSKYEVRLYENAAN 259
Query: 66 GSLS-TVNAT 74
G+ VNAT
Sbjct: 260 GTFVIKVNAT 269
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K LD E+ +Y + DR P ++ + + DINDNAP+ + +
Sbjct: 302 EMKLNDTLDFEENKQYEIQVKATDRGIPPMAGHCMVLVEVLDINDNAPKITVTSLALPVR 361
Query: 61 ENAEIGSLSTVNATIGVN 78
E+A G TV A I V+
Sbjct: 362 EDAPPG---TVIALISVS 376
>gi|344280988|ref|XP_003412263.1| PREDICTED: protocadherin-16 [Loxodonta africana]
Length = 2693
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1201 EFGTMRSLDREVEPVFQLKIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1260
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1261 EDAPAGTL 1268
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P+ L+T+++ D+ND AP F + E
Sbjct: 996 LSVVRPLDREQRAEHVLTVVASDHGSPSRSATQLLTVSVADVNDEAPAFQQQEYRVLLRE 1055
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1056 NSPPGTSLLTLRAT 1069
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 557 EVTTLQTLDRERQSSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 613
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+ + D+NDN P F ++ E+ +G+
Sbjct: 1955 LDFESMTQYNLTVAAADRGQPPRSSAVPVTVIVLDVNDNPPVFTRASYHMAVPEDTPVGA 2014
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE+ L + +DR P + + + D ND+AP F S S + E
Sbjct: 1098 LRTLRVLDREEQEEINLTVYARDRGSPPLLTHVRVRVVVEDENDHAPTFGSAHLSLEVPE 1157
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1158 GQDPQTLTTLRASDPDVGAN 1177
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L AR LD E AR+ L D PA +L +T+ + D+ND++P F + S S+
Sbjct: 2054 LHLARPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVEDVNDHSPAFPLSLLSTSL 2110
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2111 AENQPPGTLVT 2121
>gi|296193029|ref|XP_002744363.1| PREDICTED: protocadherin gamma-A12 [Callithrix jacchus]
Length = 931
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D+NDNAP FA S+
Sbjct: 193 ELVLERALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVMDVNDNAPAFAQSEYRESVP 252
Query: 61 ENAEIGS-LSTVNAT---IGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENVALGTQLLVVNATDPDEGVNGEVRYSFRYVDDKAAQVFK 293
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----A 63
LDRE++ Y + DR P + I+L + D NDN P F SA I EN A
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNLRGA 469
Query: 64 EIGSLST------VNATIGVNRCGHTFRGKDLRCY 92
+ S++ NA I + T +G L Y
Sbjct: 470 SLVSMTAHDPDCEENAQITYSLAEDTIQGAPLSSY 504
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIAELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLTSSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + + +SILE+A +G+
Sbjct: 970 LDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDALVGT 1029
Query: 68 ----LSTVNATIGVN 78
+S + IG+N
Sbjct: 1030 SVIQVSASDPDIGLN 1044
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1070 VRTNKGLDRESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPE 1129
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1130 NSPVGSV 1136
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ +R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 751 VQTIKQLDREEQSRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGE 810
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 811 DQPQGTPVTTVTAT 824
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 645 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 704
Query: 61 ENAEIG 66
EN +G
Sbjct: 705 ENVPVG 710
>gi|269914099|ref|NP_001013028.2| protocadherin beta 16 precursor [Pan troglodytes]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELMLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|332234734|ref|XP_003266559.1| PREDICTED: protocadherin beta-16 [Nomascus leucogenys]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTQHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P+ + + + + DINDNAPEF I A I
Sbjct: 193 ELVLDKELDREEEPQLKLTLTALDGGSPSRSGTAQVCIEVVDINDNAPEFEQPIYKAQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|444713181|gb|ELW54089.1| Protocadherin beta-7 [Tupaia chinensis]
Length = 760
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE++ +L D P +LI + + DINDNAPEF + A +
Sbjct: 185 ELVLDQVLDREELPELSLTLMALDGGSPPRSGTALIRVEVLDINDNAPEFVQSLYKAQVP 244
Query: 61 ENAEIGSLST 70
E++ +G+L T
Sbjct: 245 EDSPVGALVT 254
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE Y + V D P ITL ++D+NDNAP F + + E
Sbjct: 395 LVTEKALDREWKTEYNITITVTDMGTPRLTTEHSITLLVSDVNDNAPAFTQASYTLLVRE 454
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S +A G N
Sbjct: 455 NNSPALHIGTISATDADAGTN 475
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
+L R LD E + + DR PA +L+ + + D NDNAP
Sbjct: 504 QLFALRSLDYEALRAFEFGVRAADRGSPALSSQALVRVLVLDANDNAP 551
>gi|440902401|gb|ELR53198.1| Protocadherin alpha-C1, partial [Bos grunniens mutus]
Length = 1024
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF +I ILEN+
Sbjct: 186 KSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDNAPEFDQLIYKVRILENSLN 245
Query: 66 GSLS-TVNAT 74
GSL +NAT
Sbjct: 246 GSLVIKLNAT 255
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + L +D PA +T+ + D NDNAP F + +
Sbjct: 508 ELVLEKALDREQRATHRLVLTARDGGLPARSGEVQVTIVVVDANDNAPVFERSVYRTEVP 567
Query: 61 ENAEIGSL 68
E A G++
Sbjct: 568 ETAPNGTV 575
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE++ Y + D P +T+++ D+NDN P F + E
Sbjct: 721 LVTDGPLDREQVGEYQVLITASDGGSPPLSTRRTLTVSVADVNDNTPSFPKSKQELFVAE 780
Query: 62 N----AEIGSLSTVNATIGVN 78
N A +G + + +G N
Sbjct: 781 NNAPGASLGHVFAQDPDLGKN 801
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++T LD E+ Y ++ D+ I + + DINDNAPE + +
Sbjct: 289 EIRTKGKLDFEENKLYEISVEAIDKGNIPMAGHCTILVEIVDINDNAPEVTITSLALPVR 348
Query: 61 ENAEIGSLSTVNATIGVNRCGHTFRGK---DLRCYNLFK 96
E+A++G TV A + V+ G+ L +N FK
Sbjct: 349 EDAQVG---TVIALVSVSDRDSGANGQVTCSLMAHNPFK 384
>gi|119514183|gb|ABL75846.1| protocadherin 2A6 [Takifugu rubripes]
Length = 1031
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 484 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 543
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 544 ENNAPGAL 551
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 271 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 330
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 331 ENSPIGSLVIKLNAT 345
>gi|73949388|ref|XP_849204.1| PREDICTED: protocadherin beta-18 [Canis lupus familiaris]
Length = 795
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 404 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 464 NNSPALHIGTVSATDRDAGAN 484
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D P +L+ + + DINDNAPEF + +
Sbjct: 193 ELLLDQSLDREKEPELKLKLTALDGGSPPRSGTTLVHILVLDINDNAPEFERPVYEVQVP 252
Query: 61 ENAEIGSLST-VNAT 74
EN+ + SL V+AT
Sbjct: 253 ENSPVDSLVVRVSAT 267
>gi|326673281|ref|XP_002664314.2| PREDICTED: protocadherin alpha-C2-like [Danio rerio]
Length = 811
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL ++ LDRE + Y + V D+ P IT+ L D+NDNAP+F + +
Sbjct: 401 ELLVSKPLDREVVPEYEITLVVTDKGNPPLSDNETITVHLLDVNDNAPQFPQTFYTIPVK 460
Query: 61 EN----AEIGSLSTVNATIGVNR 79
EN A +GS++ ++ + N+
Sbjct: 461 ENNAPGALLGSITAIDPDLNENQ 483
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D PA + I + + D NDNAP+F + S +I
Sbjct: 188 DLVLMKALDREDKAVHNLILTAIDGGVPARSGTASIIVRVQDTNDNAPQFDQALYSLNIS 247
Query: 61 ENAEIGSLST-VNAT 74
EN+ G++ +NAT
Sbjct: 248 ENSPAGTVVVKLNAT 262
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE + Y L V+ D C + + LTL D+NDNAPEF++ + ++
Sbjct: 3047 ELKTSLPLDREILEVYHL--MVKATDGGGRFCQAAVELTLEDVNDNAPEFSADPYTVTVY 3104
Query: 61 ENAEIGS----LSTVNATIGVNR 79
EN E + + ++A +G+N
Sbjct: 3105 ENTEPQTPLLRVQAIDADLGLNH 3127
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL +D QP + + + ++D+NDN P F+ S I
Sbjct: 3360 EVKVNKLLDRELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVIQ 3419
Query: 61 ENAEIG 66
EN +G
Sbjct: 3420 ENKPVG 3425
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E + ++ L V+D+D P + I + +TD ND+AP F S + E
Sbjct: 1483 LYTTEKLDHETMQQHILTVMVRDQDVPVLRNFARIVINVTDTNDHAPWFTSSFYEGRVYE 1542
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1543 SAAVGS 1548
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +Y LN V D P L+ + + D+NDN PEF S + E
Sbjct: 743 LKILSPLDRELKDQYNLNITVYDLGIPQKSSWRLLDVNVLDVNDNPPEFLQESYSVHLKE 802
Query: 62 NAE----IGSLSTVNATIGVN 78
N E I + V+ +GVN
Sbjct: 803 NEEGHNAIIQVQAVDKDLGVN 823
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + DR I + + D+NDNAP+ + ++E
Sbjct: 1060 IRTADNLDRETTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVME 1119
Query: 62 NA 63
N+
Sbjct: 1120 NS 1121
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR RY L D P ++ I + +T N+ AP+F S+ I E
Sbjct: 1588 IKTAKELDRNNHGRYELVVKATDHGIPPLSQITSIHIFVTISNNAAPKFTKKEYSSEISE 1647
Query: 62 NAEIGSL 68
A +GS
Sbjct: 1648 TAHVGSF 1654
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + + L + D PA V+ + + + D NDN P+F
Sbjct: 1168 TSRKLDREQQSEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQF 1214
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T DRE+ + L V D +P L+ +T+ D+NDN P F ++ A + +A
Sbjct: 2004 TGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVEDVNDNNPVFVNLPYYAMVQIDA 2063
Query: 64 EIGSL----STVNATIGVN 78
G L + V+ IG N
Sbjct: 2064 PEGHLIRHVTAVDRDIGKN 2082
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+K LDREK + L +D+ ++P L+ +T+ D+NDN P F +
Sbjct: 846 IKAVAPLDREKQHTHLLKIEARDQAENEPQLFSHVLLKVTVEDVNDNPPVFIPSNYHVKV 905
Query: 60 LENAEIGSLST 70
E+ +G++ T
Sbjct: 906 REDLPVGTVIT 916
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
LD EK +Y + D S I +T+ D+NDN P F + I ++ E+
Sbjct: 2845 LDHEKTNKYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRFTAEIYKGTVSED 2899
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LD E TL D P + + LTD+NDN P F + I E
Sbjct: 2311 IETAKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQVYEVKISE 2370
Query: 62 NAEIGSLST-VNAT 74
++ G T V AT
Sbjct: 2371 LSKPGHFVTCVKAT 2384
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 769 VRTVRRLDREAMPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 828
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 829 NSIVGSV 835
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 135 IRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVVDRNDHSPVFEQAQYRETLRE 194
Query: 62 NAEIG 66
N E G
Sbjct: 195 NVEEG 199
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 464 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 523
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 524 -SVVSVT 529
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 351 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSV 410
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 411 LENAPLGHSVIHIQAVDADHGEN 433
>gi|57528918|ref|NP_001009593.1| protocadherin 2 alpha b 6 precursor [Danio rerio]
gi|53748793|dbj|BAD52310.1| cadherin-related neuronal receptor variable 6 [Danio rerio]
gi|53748812|dbj|BAD52323.1| cadherin-related neuronal receptor variable 6 [Danio rerio]
gi|190338338|gb|AAI63287.1| Protocadherin 2 alpha b 6 [Danio rerio]
Length = 939
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE + Y + D P S+I + ++D+NDNAP F + + + EN++IG
Sbjct: 410 LDRESASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 469
Query: 67 ---SLSTVNATIGVN 78
++S V+ +G N
Sbjct: 470 VLHTVSAVDPDVGDN 484
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1 ELKTARGLDREK--IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDREK + R TL A D +P I + + D+NDN P F + A
Sbjct: 190 ELVLQKALDREKQPVIRLTLTA--VDGGKPPRSGTVHIIVNVIDVNDNIPVFTKSLYKAR 247
Query: 59 ILENAEIG-SLSTVNA 73
ILENA + S+ TVNA
Sbjct: 248 ILENAPVEFSVITVNA 263
>gi|47213035|emb|CAF95304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2845
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L D+NDN P F + +
Sbjct: 489 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDVNDNVPRFPQSFYTIRVT 548
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 549 ENNAPGAL 556
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L D+NDN P F + +
Sbjct: 1406 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDVNDNVPRFPQSFYTIRVT 1465
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 1466 ENNAPGAL 1473
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 1193 DLILTKALDREMQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFDREKYVVDVM 1252
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 1253 ENSPIGSLVLKLNAT 1267
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD+E Y + +D PA +I + + D+NDN P F+ + + E
Sbjct: 2173 LVTKDYLDKESTHMYDIQITAKDLGSPALSSTKVIHVDVLDVNDNRPLFSESPYTFYVPE 2232
Query: 62 NAEIG-SLSTVNAT 74
N + G S+ TV+A+
Sbjct: 2233 NNKAGSSVFTVSAS 2246
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE+ A++ L D +P IT+ ++DINDN P ++ ENA
Sbjct: 1963 RQLDREQTAQHWLKVTALDGGKPIKSGNLNITVIVSDINDNPPVCDKQKYVVTVKENAPE 2022
Query: 66 GS-LSTVNAT 74
G+ L TVNA+
Sbjct: 2023 GTFLLTVNAS 2032
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1779 EFGTTRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1838
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1839 EDAPAGTL 1846
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F S + E
Sbjct: 1574 LSVVRSLDREQRAEHILTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1633
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1634 NSPPGTSLLTLRAT 1647
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F+ ++ E+ +G+
Sbjct: 2533 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFSRASYRMAVPEDTPVGA 2592
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1159 EMTTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQASGAA 1215
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE ++Y L D P +L+ +TL DIND+AP F A +
Sbjct: 203 ELVVTGELDRENRSQYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 262
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 263 ESLAPGS 269
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F S S + E
Sbjct: 1676 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPE 1735
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+ + A+ +G N
Sbjct: 1736 GQDPQTLTVLRASDPDVGAN 1755
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 424 ARQLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTF 469
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 98 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 151
Query: 62 NAEIGS 67
+ +G+
Sbjct: 152 HTALGT 157
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LD E + L D PA + +++ L D+NDN P+F +AS+ E
Sbjct: 527 ITTAASLDYELEPQPQLIVVATDGGLPALASSATVSVALQDVNDNEPQFQRTFYNASLPE 586
Query: 62 NAEIGS 67
+ G+
Sbjct: 587 GTQPGT 592
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1883 ELRTATALDREQCPSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPT 1935
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L+ A LD E AR+ L D PA +L +T+ + D+ND+ P F + S S+
Sbjct: 2632 LRLAHPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPVFPLSLLSTSL 2688
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2689 AENQPPGTLVT 2699
>gi|224064906|ref|XP_002187672.1| PREDICTED: cadherin-8-like [Taeniopygia guttata]
Length = 799
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
++ + LDRE+ A YTL A DRD QP E S + + DINDNAPEF A+
Sbjct: 117 DIHAMKRLDREEKAEYTLTAQAVDRDTNQPL-EPPSEFIIKVQDINDNAPEFVEGPYHAT 175
Query: 59 ILENAEIGSLST-VNAT 74
+ E + +G+ T V AT
Sbjct: 176 VPEMSVVGTFVTKVTAT 192
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 2 LKTA-RGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+KTA +DRE Y + +D + +T+TL+D+NDN P+FA + S
Sbjct: 225 IKTALPNMDREAKEEYFVVIQAKDMGGHMGGLSGTTTVTITLSDVNDNPPKFAQSLYHFS 284
Query: 59 ILENAEIG 66
++E+ +G
Sbjct: 285 VMEDVALG 292
>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
Length = 3033
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+
Sbjct: 2226 QLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVA 2285
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2286 ENASIGAM 2293
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1108 LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1167
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1168 FVGKLTAVDRDIGRN 1182
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2764 GLDYELTHLYEIWIEAVDGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLE 2818
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2861 EIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2919
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2920 ENAEIGSF 2927
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 452 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFSM 544
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1979 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 2037
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 2038 PIATEVVTVSA 2048
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1547 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1604
Query: 59 IL 60
IL
Sbjct: 1605 IL 1606
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDREK++RY + +D+ P + + + L + D+NDN P+F
Sbjct: 658 QLTTRRPLDREKMSRYEIPVIARDQGAPTPQSATATVWLNVADVNDNYPQF 708
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D ND+APEF S S E
Sbjct: 2965 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDDAPEFEHSFYSFSFPE 3021
Query: 62 NAEIGSL 68
+ SL
Sbjct: 3022 LSPFDSL 3028
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ Y QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2543 EISTATTLDREETPVYHFTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 2601
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2602 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 2642
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2332 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2390
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2391 MENTVPPNGGYVLTVNA 2407
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2444 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPA 2503
Query: 66 GS 67
G+
Sbjct: 2504 GT 2505
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1880 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1936
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1937 QVGQIVAKDADLGQN 1951
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS 67
A G+
Sbjct: 282 TALPGT 287
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L AR LDRE + L +D P S IT+ + D NDNAPEF + S
Sbjct: 1331 QLSLARRLDRESQEIHHLIVVAKDAALKHPLSSNAS-ITIVVLDENDNAPEFTQSSSEVS 1389
Query: 59 ILENAEIGS 67
+LE + G+
Sbjct: 1390 VLETSPTGT 1398
>gi|62087434|dbj|BAD92164.1| protocadherin gamma subfamily A, 3 isoform 1 precursor variant
[Homo sapiens]
Length = 961
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 433 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 492
Query: 62 NAEIGS 67
N G+
Sbjct: 493 NNPRGA 498
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 222 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 281
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 282 ENVPVGTRLLTVNAT 296
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 329 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 386
Query: 61 ENAEIG 66
E +G
Sbjct: 387 EEGTVG 392
>gi|127138861|ref|NP_001076013.1| protocadherin gamma-A3 precursor [Pan troglodytes]
gi|62510870|sp|Q5DRB7.1|PCDG3_PANTR RecName: Full=Protocadherin gamma-A3; Short=PCDH-gamma-A3; Flags:
Precursor
Length = 932
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKREIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>gi|326928214|ref|XP_003210276.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-10-like [Meleagris
gallopavo]
Length = 962
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y ++ +D PA S +T+ ++D+NDNAP F S ++E
Sbjct: 411 LVTTEPLDREAVSEYNISIMARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVME 470
Query: 62 NAEIG-SLSTVNA 73
N G S+ +V+A
Sbjct: 471 NNAPGASICSVSA 483
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + + L +DR A + + L D+NDNAPE S + E+A G
Sbjct: 312 LDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVQEDAPPG- 370
Query: 68 LSTVNATIGV 77
TV A I V
Sbjct: 371 --TVIAVISV 378
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P + + +T+ D NDN P F S+
Sbjct: 197 ELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVTVLDANDNIPAFDQPSYGVSLP 256
Query: 61 ENAEIGSLS-TVNAT 74
E+A G+L +NAT
Sbjct: 257 EDAPAGTLVIQLNAT 271
>gi|149726795|ref|XP_001502193.1| PREDICTED: protocadherin gamma-B2 [Equus caballus]
Length = 850
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+I Y + DR +P ITL + D+NDNAP F +
Sbjct: 403 KLVTEGALDREEIPEYNVTIMATDRGKPPLSSSVSITLHIADVNDNAPVFHQASYVVHVA 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + +G N R ++ DL
Sbjct: 463 ENNPPGASIAQVSASDPDLGPNGRVSYSIVASDL 496
>gi|14196471|ref|NP_114443.1| protocadherin gamma-A5 isoform 2 precursor [Homo sapiens]
gi|5457072|gb|AAD43772.1|AF152512_1 protocadherin gamma A5 short form protein [Homo sapiens]
gi|85397801|gb|AAI04927.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
gi|109730483|gb|AAI13461.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
gi|119582342|gb|EAW61938.1| hCG1982215, isoform CRA_q [Homo sapiens]
gi|313883554|gb|ADR83263.1| Unknown protein [synthetic construct]
Length = 813
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V D P S I L + D+NDN P F S S+ E
Sbjct: 404 LLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 464 NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P + I +T+ D NDNAP F S S+
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L+ + G+N + ++FR ++ + F+
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQ 293
>gi|391333242|ref|XP_003741028.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Metaseiulus occidentalis]
Length = 2673
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T+ LDRE ++ YTL QD +P + + + + D+NDNAP+FA ++ + E+A
Sbjct: 736 TSLPLDRESVSGYTLVITAQDDGRPPLSDSTSVEIEVIDVNDNAPKFAMASYTSDVSEDA 795
Query: 64 EIGS----LSTVNATIGVN-RCGHTFRGKD 88
+G+ +S ++ G+N + +TF G D
Sbjct: 796 LLGTSIVQVSALDEDQGLNAQVRYTFTGGD 825
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE +A Y L A DR P IT+ + DIND+ P F S + E
Sbjct: 840 VRTAKQLDREAVATYHLKAVAVDRGSPQMSTTVPITVFVEDINDSPPRFDSDRIQIFVPE 899
Query: 62 NAEIGSL 68
N +GS+
Sbjct: 900 NVPLGSV 906
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ LD E + Y L A VQD P+ + + + + DINDN P F + S+ E
Sbjct: 419 IRAVSPLDYETLTNYRLVARVQDGGSPSRSNTTNVLVNVLDINDNDPRFYATEFHESVSE 478
Query: 62 NAEIG 66
N E G
Sbjct: 479 NVEKG 483
>gi|363738859|ref|XP_003642083.1| PREDICTED: protocadherin beta-15-like [Gallus gallus]
Length = 802
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+T+ LDRE A Y ++ D + +++ + D+NDNAP F S S+
Sbjct: 413 ELRTSAALDRETTAEYNVSIVATDWGRARLSARESVSVRIADVNDNAPRFTQAAYSMSVS 472
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN IGS+ +A G N
Sbjct: 473 ENEAGAVRIGSVKATDADAGAN 494
>gi|348546085|ref|XP_003460509.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 637
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ +Y + D P S+ITL L+D+NDN P F+ + + + EN+++G+
Sbjct: 410 LDREETPQYNVTISATDEGSPPLSNTSVITLYLSDVNDNVPRFSQSLINVFVKENSKVGT 469
Query: 68 L 68
+
Sbjct: 470 V 470
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D P S I + + DINDNAP F+S + L
Sbjct: 190 ELVLQKALDREKQASIQLLLTAIDGGSPPNTGTSEIEVRVLDINDNAPVFSSTLYKIKTL 249
Query: 61 ENAEIG-SLSTVNAT---IGVN-RCGHTFRGKD 88
EN+ IG ++ T+NAT G N ++ R KD
Sbjct: 250 ENSPIGTTIFTLNATDADEGTNGEIVYSLRSKD 282
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF--ASVINSASILENAEI 65
+D E+ + + A +D+ QP S + + + D+NDNAPE S++N+ + E+AEI
Sbjct: 305 IDYEERKAFEIRAEARDKGQPPMAAHSKVLVEVIDLNDNAPEIKVTSLLNAVN--EDAEI 362
Query: 66 GS 67
G+
Sbjct: 363 GT 364
>gi|14589880|ref|NP_061739.2| protocadherin gamma-A3 isoform 1 precursor [Homo sapiens]
gi|296439266|sp|Q9Y5H0.2|PCDG3_HUMAN RecName: Full=Protocadherin gamma-A3; Short=PCDH-gamma-A3; Flags:
Precursor
gi|119582340|gb|EAW61936.1| hCG1982215, isoform CRA_o [Homo sapiens]
gi|189442396|gb|AAI67820.1| Protocadherin gamma subfamily A, 3 [synthetic construct]
Length = 932
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>gi|11056024|ref|NP_061741.1| protocadherin gamma-A5 isoform 1 precursor [Homo sapiens]
gi|37999838|sp|Q9Y5G8.1|PCDG5_HUMAN RecName: Full=Protocadherin gamma-A5; Short=PCDH-gamma-A5; Flags:
Precursor
gi|5456942|gb|AAD43719.1| protocadherin gamma A5 [Homo sapiens]
gi|119582351|gb|EAW61947.1| hCG1982215, isoform CRA_z [Homo sapiens]
Length = 931
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V D P S I L + D+NDN P F S S+ E
Sbjct: 404 LLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 464 NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P + I +T+ D NDNAP F S S+
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L+ + G+N + ++FR ++ + F+
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQ 293
>gi|57043471|ref|XP_544302.1| PREDICTED: protocadherin beta-7 [Canis lupus familiaris]
Length = 797
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+++ +L D P +LI + + D+NDN PEF + +
Sbjct: 193 ELVLDRVLDREEVSELSLTLTALDGGSPPRSGTTLIHILVLDVNDNVPEFVQSLYRVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 253 ENSPVGSL 260
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 403 LVTESPLDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 463 NNSPALHIGTVSATDRDAGAN 483
>gi|397517952|ref|XP_003829167.1| PREDICTED: protocadherin gamma-A3 [Pan paniscus]
Length = 829
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKREIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>gi|328790119|ref|XP_624967.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2, partial [Apis mellifera]
Length = 1065
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNA--PEFASVINSASI 59
++ + LD E+ +TL +DR +P+ +++ + + D+N+N P F + SAS+
Sbjct: 960 IRITQSLDFEERQMHTLTIVARDRGEPSLSSETMVIIDVVDVNENVHPPLFDDFVVSASV 1019
Query: 60 LENAEIGSL-STVNATI-----GVNRCGHTFRGKD 88
EN +G+L +TV A G +R G+T RG D
Sbjct: 1020 FENQAVGTLVTTVRAKDADPLGGDSRIGYTIRGGD 1054
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ + Y LN V D +P ++ +T+ D+NDNAP F + S + E A G+
Sbjct: 752 LDRERESEYFLNISVYDLGKPQKSASRMLPVTILDVNDNAPRFDKSLASFRVSETALNGT 811
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 LDREKIAR-YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE + Y L DR P + + L D+NDNAP F+ I + E A +
Sbjct: 275 LDRETAVQGYNLTLRATDRGVPQRFSYKFVPVHLADLNDNAPVFSREIYEVRVAETAPVN 334
Query: 67 S 67
+
Sbjct: 335 T 335
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 8 LDREKIARYTLNAHVQDR-----DQPAWECVSLITLTLTDINDNAPEFA 51
LDRE+ Y L QD D P +L+ + + D+NDNAP FA
Sbjct: 855 LDRERQEVYELRIRAQDNGGRGTDAPPLYSDALVRVMVDDVNDNAPSFA 903
>gi|301753493|ref|XP_002912634.1| PREDICTED: protocadherin gamma-B1-like [Ailuropoda melanoleuca]
Length = 808
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDREK Y + DR +P S ITL + D+NDN P F I
Sbjct: 402 KLVTDGSLDREKTPSYNVTITATDRGKPPLSSSSSITLHIADVNDNTPVFEQAFYLVHIA 461
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + +G N R ++ DL
Sbjct: 462 ENNPPGASIAQVSASDPDLGPNGRVSYSIVASDL 495
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSAS 58
E+K+ +D E + YT+N +D A EC I + + D NDNAPE F SV N S
Sbjct: 299 EIKSKGPIDFEISSSYTMNIEAKDGGGMATECK--IIIEILDENDNAPEVIFTSVSN--S 354
Query: 59 ILENAEIGSLSTVNATI 75
I E+AE+G + + T+
Sbjct: 355 ITEDAELGMVIALFKTL 371
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + L D P I + +TD NDN P F+ + SI
Sbjct: 193 ELILEKPLDREHQNSHFLVLTAMDGGDPVQSGTIQIRIEVTDANDNPPVFSQDVYKVSIP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRG-KDLRCYNLF 95
EN +G+ ++ V+ G+N ++F+ +D+R N+F
Sbjct: 253 ENLPLGTSVLKVTAVDQDEGINAEITYSFKTLRDIR--NMF 291
>gi|133777841|gb|AAI15410.1| PCDHGA3 protein [Homo sapiens]
Length = 694
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
>gi|8926619|gb|AAF81914.1|AF217757_1 protocadherin 3X [Homo sapiens]
gi|9965296|gb|AAG10030.1|AF282973_1 protocadherin-3x [Homo sapiens]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|14196465|ref|NP_114400.1| protocadherin gamma-A3 isoform 2 precursor [Homo sapiens]
gi|5457068|gb|AAD43770.1|AF152510_1 protocadherin gamma A3 short form protein [Homo sapiens]
gi|119582344|gb|EAW61940.1| hCG1982215, isoform CRA_s [Homo sapiens]
Length = 829
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>gi|380802923|gb|AFE73337.1| protocadherin beta-6 precursor, partial [Macaca mulatta]
Length = 367
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ R TL D P S I + + DINDN PEFA + A I
Sbjct: 136 ELVLDKPLDREEQPRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEFAQELYEAQIP 195
Query: 61 ENAEIGSL 68
EN +GSL
Sbjct: 196 ENNPLGSL 203
>gi|127139358|ref|NP_001076029.1| protocadherin gamma-A4 [Pan troglodytes]
Length = 962
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA + E
Sbjct: 435 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYVPE 494
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 495 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 535
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 224 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVH 283
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 284 ENVPVGTLLLTVKAT 298
>gi|5456936|gb|AAD43717.1| protocadherin gamma A3 [Homo sapiens]
Length = 932
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
Length = 3089
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA+ LDRE + YT+ D+ +P + + +T+TD+ D+ PEF A + E
Sbjct: 974 IRTAKALDRETVPEYTIVVTAIDKGRPPKHSFATVKITITDVKDSPPEFYPKEYDAYLPE 1033
Query: 62 NAEIG-SLSTVNAT 74
N+ G ++ +NAT
Sbjct: 1034 NSPAGTTVVQLNAT 1047
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE RY L D S +T+ +TD+NDN P+F +I E+A+I
Sbjct: 465 RSLDREITDRYHLEIQATDSGTTPKFARSNVTIIVTDVNDNPPQFTQKNYKVTIAEDAKI 524
Query: 66 GSL-STVNAT 74
+L +TV AT
Sbjct: 525 NTLVTTVRAT 534
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE + ++L D P+ + + +++ D NDNAP F+ +ASI E
Sbjct: 868 ISIAAALDRETRSTFSLEVRASDNGVPSLSGRTDVVISILDSNDNAPVFSQPSYNASIAE 927
Query: 62 NAEIGS 67
+ EIG+
Sbjct: 928 DVEIGT 933
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 2 LKTARGLDREKIAR--YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T LDRE+IA+ +T+ A V D + VS +T+ + D NDNAP F S SI
Sbjct: 354 IYTVNYLDREEIAKHQFTVTATVNDGTTTLFSRVS-VTIDVLDRNDNAPRFESPSYQVSI 412
Query: 60 LENAEIGS 67
E+ IG+
Sbjct: 413 PEDIPIGT 420
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ YTL+ +DR +P+ + + +++TD+NDN P F+S + AS+ E+ +GS
Sbjct: 569 LDYEQQQSYTLDVTAKDRGRPSLSNTTTVVVSVTDVNDNQPRFSSNVYQASVKEDIPVGS 628
>gi|149726258|ref|XP_001504128.1| PREDICTED: protocadherin beta-7 [Equus caballus]
Length = 795
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE++ +L D P +L+ + + DINDN PEF + +
Sbjct: 193 ELVLDRVLDREEVPELSLTLTALDGGSPPRSGTALVRILVLDINDNVPEFVQSLYKVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 253 ENSPVGSL 260
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTESPLDRESQAEYNITITVTDMGSPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDAGAN 483
>gi|449475319|ref|XP_004176216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-12-like [Taeniopygia
guttata]
Length = 1092
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y L V+D + + +T+ ++D+NDNAP F A++ E
Sbjct: 413 LLTNASLDRERRAEYNLTLVVRDMGDLSLAVLKHLTICISDVNDNAPAFEKAAYEAAVDE 472
Query: 62 NAEIGS-LSTVNAT 74
N+E S L TV AT
Sbjct: 473 NSEAPSFLLTVRAT 486
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + +DRE + ++L D P +LI + + D NDN+P FA +
Sbjct: 196 ELVVVKEVDRELHSSFSLVLTATDHGDPPKSGTALIKIIVLDSNDNSPVFAESSLMVEVR 255
Query: 61 ENAEIGS-LSTVNAT 74
E+A+ G+ L TV AT
Sbjct: 256 EDAQPGTLLVTVTAT 270
>gi|449282469|gb|EMC89302.1| Cadherin-1, partial [Columba livia]
Length = 428
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ + LDRE+I +Y L +H V QP + + +I +T+TD NDN P F + I
Sbjct: 38 LEVTKPLDREQIDKYVLFSHAVSANGQPVEDPMEII-ITVTDQNDNRPVFTKQVFVGYIE 96
Query: 61 ENAEIG-SLSTVNAT 74
ENA+ G S+ TVNAT
Sbjct: 97 ENAKPGTSVMTVNAT 111
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D++ + + +TD NDN P F ++ EN E+G
Sbjct: 155 GLDRETTPNYTLIIQAADQEGTGLATTATAIVEVTDANDNPPIFDPTRYEGTVKEN-EVG 213
Query: 67 SLST 70
+ T
Sbjct: 214 VVVT 217
>gi|410033344|ref|XP_003308299.2| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Pan troglodytes]
Length = 2887
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 440 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 499
Query: 67 SL 68
L
Sbjct: 500 YL 501
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F +
Sbjct: 851 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEH 910
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 911 NSPIGLAVARVTAT 924
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 540 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 599
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 600 DAAVGTSVVTVSA---VDRDAHS 619
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 219 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 278
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 279 NLEVGYEVLTVRATDG 294
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 327 IRTRGPVDREEVESYQLTVEASDQGRDPSPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 386
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 387 REDVTPGA 394
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 745 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 804
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 805 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 833
>gi|296193016|ref|XP_002744324.1| PREDICTED: protocadherin gamma-A5 [Callithrix jacchus]
Length = 813
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V D P V+ I L + D+NDN P F S S+ E
Sbjct: 404 LLTTRHLDREETSDYNITLTVIDHGTPPLSTVNHIPLKVADVNDNPPNFLQTSYSTSLPE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA I + TF+G L Y
Sbjct: 464 NNPRGVSIFSVMAHDPDSGDNARITYSLAEDTFQGVPLSSY 504
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P + I + + D NDNAP F S S+
Sbjct: 193 ELVLEQALDREKETVHDLLLIALDGGDPVLSGTTHIRVMVLDANDNAPLFTQSEYSVSVP 252
Query: 61 ENAEIG----SLSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G +L+ + G+N + +FR ++ + F+
Sbjct: 253 ENIPVGTRLLTLTATDPDEGINGKLTFSFRNEEDKISETFQ 293
>gi|119514181|gb|ABL75844.1| protocadherin 2A4 [Takifugu rubripes]
Length = 949
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 402 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 461
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 462 ENNAPGAL 469
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D +PA I + + D NDN+P F + I+
Sbjct: 189 ELILTKVLDREQQSVHNLILTAVDGGKPARSGTVTIVVHVLDTNDNSPTFDKSNYNLEIM 248
Query: 61 ENAEIGSLST-VNAT 74
EN+ IGSL +NAT
Sbjct: 249 ENSPIGSLVIHLNAT 263
>gi|14195605|ref|NP_066008.1| protocadherin beta-16 precursor [Homo sapiens]
gi|308153560|sp|Q9NRJ7.3|PCDBG_HUMAN RecName: Full=Protocadherin beta-16; Short=PCDH-beta-16; AltName:
Full=Protocadherin-3X; Flags: Precursor
gi|13876376|gb|AAK21988.1| protocadherin beta 8a [Homo sapiens]
gi|119582379|gb|EAW61975.1| protocadherin beta 16 [Homo sapiens]
gi|193786434|dbj|BAG51717.1| unnamed protein product [Homo sapiens]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|37183010|gb|AAQ89305.1| cadherin FIB3 [Homo sapiens]
Length = 916
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 61 ENAEIGS-LSTVNAT---IGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFK 293
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 469
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 470 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 504
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>gi|23271279|gb|AAH36062.1| Protocadherin beta 16 [Homo sapiens]
gi|157928918|gb|ABW03744.1| protocadherin beta 16 [synthetic construct]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|410948501|ref|XP_003980977.1| PREDICTED: protocadherin gamma-A5 [Felis catus]
Length = 832
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+I+ Y + V D P S I+L + DINDN P F S ILE
Sbjct: 404 LLTTKALDREEISDYNITITVIDSGNPPLSTESHISLNVADINDNPPVFPHTSYSTYILE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA I + F+G L Y
Sbjct: 464 NNPRGISILSVTAHDPDSGNNAKITYSLAEGMFQGMSLSTY 504
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK+A + L D P I + + D NDNAP F ++
Sbjct: 193 ELVLERPLDREKVAVHDLLLTALDGGDPILSSSMHIHVVVLDANDNAPLFTQSEYRVTVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +GS L T+ AT GVN ++FR ++ + F+
Sbjct: 253 ENIPVGSRLLTLTATDPDEGVNGELTYSFRNEEDKISETFQ 293
>gi|397518012|ref|XP_003829194.1| PREDICTED: protocadherin beta-16 [Pan paniscus]
Length = 776
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELMLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
>gi|348546087|ref|XP_003460510.1| PREDICTED: protocadherin alpha-3-like, partial [Oreochromis
niloticus]
Length = 635
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ +Y + D P S+ITL L+D+NDN P F+ + + + EN+++G+
Sbjct: 410 LDREETPQYNVTISATDEGSPPLSNTSVITLYLSDVNDNVPRFSQSLINVFVKENSKVGT 469
Query: 68 L 68
+
Sbjct: 470 V 470
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A L D P S I + + DINDNAP F+S + L
Sbjct: 190 ELVLQKALDREKQASIQLLLTAIDGGSPPNTGTSEIEVRVLDINDNAPVFSSTLYKIKTL 249
Query: 61 ENAEIG-SLSTVNAT---IGVN-RCGHTFRGKD 88
EN+ IG ++ T+NAT G N ++ R KD
Sbjct: 250 ENSPIGTTIFTLNATDADEGTNGEIVYSLRSKD 282
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF--ASVINSASILENAEI 65
+D E+ + + A +D+ QP S + + + D+NDNAPE S++N+ + E+AEI
Sbjct: 305 IDYEERKAFEIRAEARDKGQPPMAAHSKVLVEVIDLNDNAPEIKVTSLLNAVN--EDAEI 362
Query: 66 GS 67
G+
Sbjct: 363 GT 364
>gi|297676221|ref|XP_002816039.1| PREDICTED: protocadherin beta-7 [Pongo abelii]
Length = 793
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I+ ++L D P +L+ + + DINDNAP+F + +
Sbjct: 193 ELVLNQVLDREEISEFSLTLTALDGGSPPRSGTALVRILVLDINDNAPDFVRSLYKVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GS+
Sbjct: 253 ENSPVGSM 260
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTEKPLDRERNTEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E R+ L +D PA + +++ LTD+NDNAP+F+ + SA I E+A +G
Sbjct: 3299 LDYEVCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNAPQFSQDVYSAVISEDALVG 3357
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S + L L D+NDN P F+S +A +
Sbjct: 3084 ELKTFAPLDRERVPVYNLIARATDGG--GRFCHSDVRLILEDVNDNPPVFSSEHYNACVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDVGINR 3164
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGFPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NRPVGT 3463
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D P L+T+ + D NDN P F S +IL
Sbjct: 782 QLKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNNPVFLQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSGIGT 848
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPTFIPSSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 2348 TARMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E I+ + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETISHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPMFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVFAHEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|133777911|gb|AAI15409.1| PCDHGA3 protein [Homo sapiens]
Length = 694
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
>gi|134152403|gb|AAI33709.1| PCDHGA3 protein [Homo sapiens]
Length = 693
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 403 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 462
Query: 62 NAEIGS 67
N G+
Sbjct: 463 NNPRGA 468
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 192 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 251
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 252 ENVPVGTRLLTVNAT 266
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
TAR LDRE ARY L QDR P + + IT+ + D NDN P+F A+I E+
Sbjct: 1517 TARPLDREIHARYVLQITAQDRGSPTSHQGHCNITVRVEDENDNDPKFELQKYIATIDED 1576
Query: 63 AEIG----SLSTVNATIGVN 78
A IG ++ V+A IG+N
Sbjct: 1577 APIGTTVLTVKAVDADIGIN 1596
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A LD E + LN D PA+ + + + D+NDN PEF S S+ E
Sbjct: 511 IRVASTLDHETKPQVLLNIQATSGDPPAYGHTQ-VNIDIEDVNDNPPEFESSTVRISVPE 569
Query: 62 NAEIGS 67
N EIGS
Sbjct: 570 NVEIGS 575
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA----SVINSA 57
L AR LD E + R+TL D P+ I + + D+NDNAP F ++ S
Sbjct: 617 LSLARPLDYETVQRHTLIVTASDSGIPSLSTNLTILVEVQDVNDNAPVFERSEYAIKVSE 676
Query: 58 SILENAEIGSLSTVNATIGVN-RCGHTFRGKDLRC 91
S N++I ++ V+A G N R + G D R
Sbjct: 677 STPSNSQIMQVTAVDADTGNNARLTYRILGDDQRT 711
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE RY + V D P + + +++ D NDN P FA + I EN
Sbjct: 744 LDREDQERYNITVIVSDNGVPTLTATTHVIVSVLDANDNNPIFAKQLYEFQIEENMRRGS 803
Query: 65 -IGSLSTVNATIGVN 78
IG ++ +A G+N
Sbjct: 804 VIGLITATDADAGIN 818
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQD---RDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
+L AR LDRE+ + Y + D + P V+ + + + D+NDN P++ S +
Sbjct: 1064 KLVVARSLDREQQSEYRMEIRALDTSASNNPQSSAVT-VKIEIADVNDNPPKWPSDPMNV 1122
Query: 58 SILENAEIGSL 68
I E+A +GS+
Sbjct: 1123 YISEDAAVGSV 1133
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
++T LD E+ Y L D +P + V L+ + + D+NDN P F S
Sbjct: 950 IRTKASLDHEEKTIYRLAVAATDNGKPPRQTVRLLRIEVLDLNDNRPTFTS 1000
>gi|449501192|ref|XP_004186119.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin 7 [Taeniopygia
guttata]
Length = 1011
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L+ V+D PA +++ + +TD+NDN+P F + A + EN+ G
Sbjct: 73 ALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYEADLAENSSPG 132
Query: 67 S----LSTVNATIGVN 78
+ L + +GVN
Sbjct: 133 TPILQLRATDLDVGVN 148
>gi|72679460|gb|AAI00555.1| Fat1 protein [Mus musculus]
Length = 1309
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 101 EVKVTKPLDRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQ 160
Query: 61 ENAEIG 66
EN +G
Sbjct: 161 ENKPVG 166
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
LD + Y L D P+ V+ + + +TDINDN+P F+ + + E+A +
Sbjct: 3 LDYKSSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAAL 60
>gi|62510881|sp|Q5DRC9.1|PCDB5_PANTR RecName: Full=Protocadherin beta-5; Short=PCDH-beta-5; Flags:
Precursor
Length = 795
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N +IGS+S + G N
Sbjct: 462 NNSPALQIGSVSATDRDSGTN 482
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + I + + D NDNAPEF + +
Sbjct: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSLYEVQVP 252
Query: 61 ENAEIGSLSTV 71
EN+ + SL V
Sbjct: 253 ENSPLNSLVVV 263
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ R LD E Y + D + +C + + + D+NDNAPE S+ I
Sbjct: 299 EIRLKRALDFEATPYYNVEIVATDGGGLSGKCT--VAMEVVDVNDNAPELTMSTLSSPIP 356
Query: 61 ENA 63
ENA
Sbjct: 357 ENA 359
>gi|348515191|ref|XP_003445123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Oreochromis niloticus]
Length = 3072
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE + Y L A D+ P + I + + DINDNAP F + E
Sbjct: 950 VRTARKLDRENVPVYNLKAFAVDKGVPPLKAAVSIHIVVQDINDNAPVFEKDELFIDVQE 1009
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1010 NSPVGSV 1016
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + LDRE+I YT +D P + +++T+ D+NDN P F+ S I E
Sbjct: 639 ITVSEPLDREEIEFYTFGVEARDHGTPMRSSSASVSITVLDVNDNTPTFSEKTYSLKINE 698
Query: 62 NAEIGS 67
+A +GS
Sbjct: 699 DAVVGS 704
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE + V D P S +T+T++D ND+ P F SI E
Sbjct: 320 ITTIQALDREVKDTHVFKVTVTDNGTPKRSATSYLTVTVSDTNDHTPVFEQNEYRVSIRE 379
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 380 NVEVGFEVKTVRATDG 395
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LD E A YTL +D P ++ + + ++D NDNAP F I S+LE+A
Sbjct: 846 TKMELDYEDQASYTLAITAKDNGIPQKSDITYVEIIISDANDNAPHFLRDIYQGSVLEDA 905
Query: 64 EI 65
+
Sbjct: 906 PV 907
>gi|269914102|ref|NP_001013032.2| protocadherin beta-5 precursor [Pan troglodytes]
Length = 795
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N +IGS+S + G N
Sbjct: 462 NNSPALQIGSVSATDRDSGTN 482
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + I + + D NDNAPEF + +
Sbjct: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSLYEVQVP 252
Query: 61 ENAEIGSLSTV 71
EN+ I SL V
Sbjct: 253 ENSPINSLVVV 263
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ R LD E Y + D + +C + + + D+NDNAPE S+ I
Sbjct: 299 EIRLKRALDFEATPYYNVEIVATDGGGLSGKCT--VAMEVVDVNDNAPELTMSTLSSPIP 356
Query: 61 ENA 63
ENA
Sbjct: 357 ENA 359
>gi|109506492|ref|XP_001055991.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|109507203|ref|XP_001065313.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|149017305|gb|EDL76356.1| rCG49451 [Rattus norvegicus]
Length = 792
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE IA Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 403 LMTEGALDRESIAEYNITITVSDLGTPKLTTQHTITVQVSDINDNAPAFTQTSYTLFVHE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N +G++S ++ G N
Sbjct: 463 NNSPALHVGTISATDSDSGSN 483
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E+ ++L D P + I + + D+NDNAP+F +
Sbjct: 193 ELVLDKALDWEEQPEFSLTLTALDGGSPPRSGTATIHIVVLDVNDNAPQFPQEFYETKVP 252
Query: 61 ENAEIG 66
EN+ +G
Sbjct: 253 ENSPVG 258
>gi|119514184|gb|ABL75847.1| protocadherin 2A7 [Takifugu rubripes]
Length = 997
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 450 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 509
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 510 ENNAPGAL 517
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 237 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 296
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 297 ENSPIGSLVIKLNAT 311
>gi|118404910|ref|NP_001072483.1| protocadherin 10 precursor [Xenopus (Silurana) tropicalis]
gi|115292041|gb|AAI21911.1| protocadherin 10 [Xenopus (Silurana) tropicalis]
Length = 1009
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE +A YT+ +DR P I + + D+NDN+P F I + ++EN G+
Sbjct: 400 LDREAMATYTVTVLARDRGTPPLSSTKSIQVQVADVNDNSPRFTQAIYNVYVIENNVPGA 459
Query: 68 -LSTVNAT 74
+S V+AT
Sbjct: 460 YISAVSAT 467
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 1 ELKTARGLDREKIA--RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
EL + LDRE+ A RY L A D P +L+T+ + D NDN P F I + S
Sbjct: 180 ELVLKKQLDREQQALHRYVLTAI--DGGTPQRTGTALLTIKVLDSNDNVPVFEQQIYTVS 237
Query: 59 ILENAEIGSLS-TVNAT 74
+ EN+ G++ +NAT
Sbjct: 238 LPENSPPGTMVIQLNAT 254
>gi|348583147|ref|XP_003477335.1| PREDICTED: protocadherin-1-like [Cavia porcellus]
Length = 1237
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y LN VQD P +L+ +T+ D NDNAP+F A + EN+ IG
Sbjct: 238 LDRERRDSYDLNIRVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIG 296
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LD EK+ YT+ D P + + + + DINDNAP F + + E
Sbjct: 458 LQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDINDNAPVFTQSVTEVAFPE 517
Query: 62 NAEIGSL 68
N + G +
Sbjct: 518 NNKPGEV 524
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ Y L DR P+ + + + + + D NDN P+F + S++
Sbjct: 563 EIRVKTSLDREQRDSYELKVVAADRGSPSLKGTATVLINVLDCNDNDPKFMLSGYNFSVM 622
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++ G N
Sbjct: 623 ENMPALSPVGMVTVIDGDKGEN 644
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 38 LTLTDINDNAPEFASVINSASILENAEIGSL 68
+ + DINDN P F+S + + SI EN IGSL
Sbjct: 156 IEVQDINDNTPNFSSPVITLSIPENTNIGSL 186
>gi|297712754|ref|XP_002832900.1| PREDICTED: protocadherin alpha-13-like, partial [Pongo abelii]
Length = 454
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF + ++LENA
Sbjct: 236 KTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFYQSVYKVAVLENAFN 295
Query: 66 GSLS-TVNAT 74
G+L T+NAT
Sbjct: 296 GTLVITLNAT 305
>gi|31210749|ref|XP_314341.1| AGAP004850-PA [Anopheles gambiae str. PEST]
gi|30176549|gb|EAA09721.2| AGAP004850-PA [Anopheles gambiae str. PEST]
Length = 3543
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE I Y L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1085 IRTNKGLDRESIPVYHLTAIASDKGTPTMSSSVEVQIRLDDVNDSPPTFASDKLTLYVPE 1144
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1145 NSPVGSV 1151
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + +++TD+NDNAP F + A+I E+A IG+
Sbjct: 985 LDRESTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPVFKVPLYQATIPEDALIGT 1044
Query: 68 ----LSTVNATIGVN-RCGHTFRGKDL 89
++ + +G+N R + KD+
Sbjct: 1045 SVVQIAATDLDMGLNGRVKYALGQKDM 1071
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LDRE+ +RY+ D P + + +T+ D+NDN P F+ A + E
Sbjct: 766 IHTTKALDREEQSRYSFQVVAVDGGIPPKSASTSVIVTIQDVNDNDPTFSPKYYEAMLAE 825
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 826 DQPPGTPVTTVTAT 839
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + ++L
Sbjct: 660 DVSLVKPLDYENVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVL 719
Query: 61 ENAEIG 66
E+ +G
Sbjct: 720 ESVPVG 725
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L D Q +++ + +TD N+ AP F + SAS+ E
Sbjct: 871 ITIAQPLDYKQERRFALTITATDSGQRT--DTAIVNINITDANNFAPVFENAPYSASVFE 928
Query: 62 NAEIGS----LSTVNATIGVN 78
+A IG+ +S ++ +G+N
Sbjct: 929 DAPIGTTVLVVSASDSDVGIN 949
>gi|432879473|ref|XP_004073488.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 640
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE I+ Y + D P + ++T+ + D+NDNAP+F + + + EN+ +GS
Sbjct: 381 LDRENISVYNVTIRATDEGNPPLSSIHILTVQVADVNDNAPKFTEPVINVYVKENSPVGS 440
Query: 68 L 68
+
Sbjct: 441 I 441
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDREK + +L D +P+ I + + D+NDN P F+ + +
Sbjct: 161 ELVLNTALDREKQSVISLVLTAVDGGKPSRSGSLQINVNVIDVNDNVPAFSKSLYKVRVK 220
Query: 61 ENAEIGSLSTV-NAT 74
ENA G+L + NAT
Sbjct: 221 ENAAPGTLVQILNAT 235
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ +D E+ Y + +DR + + + + D NDNAPE + +
Sbjct: 269 EITVKSNIDYEETPAYEVRVQAKDRGTSPRSTQAKLLIEIIDDNDNAPEISVTSLMTPVK 328
Query: 61 ENAEIGSL 68
E+AE+GS+
Sbjct: 329 EDAEVGSI 336
>gi|403255754|ref|XP_003920576.1| PREDICTED: protocadherin gamma-A1 [Saimiri boliviensis boliviensis]
Length = 819
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITVTATDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 NAEIG----------SLSTVNATIGVNRCGHTFRGKDLRCY 92
N G S S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDSDSNENAQITYSLIEDTTQGAPLSSY 504
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D P I + + D NDN P F ++ EN +G+
Sbjct: 200 LDREEEAVHHLILTASDGGDPVRSGTLQICIQVVDANDNPPAFTQAEYHMNVPENVPVGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLF 95
L VNAT G N ++F D R +F
Sbjct: 260 QLLMVNATDPDEGANGEVTYSFHNVDHRVAQIF 292
>gi|402872811|ref|XP_003919525.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-11 [Papio
anubis]
Length = 797
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + IT+ ++DINDNAP F + + E
Sbjct: 403 LETERPLDRESTAEYNITITVTDLGIPRLKTEYNITVLVSDINDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
>gi|340375320|ref|XP_003386184.1| PREDICTED: hypothetical protein LOC100636493 [Amphimedon
queenslandica]
Length = 7134
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ D E + +YT V D P + S +T+++ D NDN P F + S S+ E
Sbjct: 1310 INTSVIFDYESVNQYTFTVSVIDSGSPPRDATSRVTISIIDYNDNQPMFTQSVYSLSLFE 1369
Query: 62 NAEIGS 67
N IGS
Sbjct: 1370 NIPIGS 1375
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE + YTL V+D P+ S++T+ + D NDN P F + + S+ EN+
Sbjct: 2374 AMTLDREAQSNYTLTLRVRDDGSPSLSSTSILTVIINDYNDNPPIFNADLYQGSVSENSP 2433
Query: 65 IG----SLSTVNATIGVN 78
+ ++S V++ I +N
Sbjct: 2434 LNTPILTVSAVDSDIDIN 2451
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE I +Y L + D P S + +T+TD ND +P F + + ++EN
Sbjct: 2510 TAGSLDREFIDQYVLLVYAYDGGSPILSSSSCVFITITDTNDQSPVFNQSLYTGQLVENT 2569
Query: 64 EIGSL 68
G++
Sbjct: 2570 ATGAV 2574
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-----ITLTLTDINDNAPEFASVIN- 55
L TA LDRE I +Y+L V+ D P + +L + +T+TD+NDNAP ++ N
Sbjct: 427 LITAVPLDRESIPQYSLT--VEAHDSPTNDSYTLYSTVSVLITVTDVNDNAPVWSYDTNI 484
Query: 56 SASILENAEIG-SLSTVNAT 74
S IL+ +G +L TV AT
Sbjct: 485 SVGILDTETVGYTLLTVLAT 504
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ AR LD E Y+ + V D P+ + + + +TDINDN P F + S+ E
Sbjct: 3261 ISVARQLDYETTQDYSFSVLVSDHGNPSLSSTAQVVINITDINDNPPYFEQDVYYISVPE 3320
Query: 62 NA 63
++
Sbjct: 3321 SS 3322
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E YT++ V D+ P + + +T+ +TD+ND PE+ + S+LEN+ GS
Sbjct: 1108 IDWETGPNYTVSLIVTDQGTPPLQSIVPLTVFITDVNDREPEWVESSLNISVLENSAPGS 1167
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE+ + D P ++ +T+ + D+ND+ P+F V + SI ENA
Sbjct: 2617 LDREETTHHNFTVTATDNGVPPNVAMATVTVEIIDVNDSPPQFDFVNYTGSISENADPNT 2676
Query: 64 EIGSLSTVNATIGVN 78
+I LS + IG+N
Sbjct: 2677 DIIRLSASDLDIGIN 2691
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A DRE + + V D P +L+ + + D+NDN P F + SA I E+
Sbjct: 3162 ADQFDRESVDNINVTVSVVDNGLPPLSSTALLIINILDVNDNEPLFTQSLYSAVISEDIT 3221
Query: 65 IGS----LSTVNATIGVN 78
+ S LS +A I N
Sbjct: 3222 VNSTVLILSATDADISAN 3239
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 2 LKTARGLDREKIARYTL--NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
L R LDRE+ + ++L N + DQ + + LI++T+ D NDN P F+ + S I
Sbjct: 3784 LTLVRPLDRERESSHSLIINVSNPNADQVLYS-IGLISITVLDTNDNNPLFSQLYYSIEI 3842
Query: 60 LENAEIGS 67
+ IGS
Sbjct: 3843 PSSTSIGS 3850
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
TA+ LDRE Y L+ D P + + + ++++D+ND+ PEF
Sbjct: 3369 TAQYLDREITDHYVLSIRAVDLGSPQFTASTTLDISISDVNDHYPEF 3415
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A GLD + Y+L+ D+ +P L+ +++ D N++ PEF + +ASI E
Sbjct: 3998 ITVASGLDFNTQSFYSLSILATDQGRPPKISSVLVNISIIDNNNHNPEFNQSLYTASITE 4057
Query: 62 NAEIGS 67
+GS
Sbjct: 4058 GLALGS 4063
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
+ GLD E+ Y L A D P +LI + + D NDN P + SI EN
Sbjct: 1934 SGDGLDYERQGAYQLRAIASDGGIPQLYSTALIVIVIIDENDNEPIWDKETYLLSISENT 1993
Query: 64 EIGS 67
IGS
Sbjct: 1994 TIGS 1997
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 1 ELKTARGLDRE----KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS 56
+L A +DRE KI R+ +N P ITL L DINDNAP F I
Sbjct: 90 QLSNAILIDRETDITKI-RFDINIIFISNLAPDLNATQPITLILIDINDNAPHFNQSIYE 148
Query: 57 ASILENAEIGS 67
I EN GS
Sbjct: 149 ELISENLSPGS 159
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ LD E I +YTL D +P +++ + + NDN P F +ILE
Sbjct: 2947 ITTSGPLDSETIDQYTLTVVAMDTGEPPLFSTVNVSVLILNTNDNRPIFTQSSYHFNILE 3006
Query: 62 NAEIGS 67
N GS
Sbjct: 3007 NQPNGS 3012
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+D E+++RY LN + + ++TL++ D+NDN P F+S I E+ IG+
Sbjct: 3687 VDYERLSRYVLNIESESVST-GNKVYVILTLSIIDVNDNPPYFSSDQYQLLISESTPIGT 3745
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE L DR P +T+ L D+NDN P F++ + I E++ G
Sbjct: 330 LDREAGNPLALTISAIDRGLPPLSDTITVTVHLLDVNDNPPLFSTSLYQLDISESSPTGQ 389
Query: 68 L 68
L
Sbjct: 390 L 390
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINS----ASILENA 63
LDRE I YTL V D P+ + + + + D NDN P F NS A++ EN
Sbjct: 2723 LDREAIDHYTLLVIVTDSGTPSLNGTTTVDVIILDQNDNPPIFDIDSNSDSYNATLTENV 2782
Query: 64 E 64
+
Sbjct: 2783 D 2783
>gi|194219810|ref|XP_001918052.1| PREDICTED: protocadherin gamma-A3 [Equus caballus]
Length = 830
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TAR LDREK++ Y + D P + ITL + DINDN P F A I E
Sbjct: 404 LVTARSLDREKVSEYNITLRATDGGSPPLSTDTHITLYVADINDNPPTFTHDSYLAYIPE 463
Query: 62 NAEIGSL----------STVNATIGVNRCGHTFRGKDLRCY 92
N G++ S NA I T +G L Y
Sbjct: 464 NNPRGAVIFSVTAQDPDSIENAHITYALIEDTIQGAPLSTY 504
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D PA I + + D NDN P F S+
Sbjct: 193 ELVLERALDREEKKVHQLILIASDGGDPAHSGSLCIQVVVLDANDNPPVFTQPEYRVSVQ 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENLPVGTWLLTVNAT 267
>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
domestica]
Length = 4351
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE A + L VQD +P+ + S + + + D+NDN+P F+
Sbjct: 1190 LSTARQLDRENKAEHILEVAVQDNGKPSLQSTSRVVVRVLDVNDNSPTFS 1239
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y+L D QP +++ + + D+NDN P F + S +
Sbjct: 3373 ELQIAKHLDWEETSSYSLTLRATDSGQPVLYQDAVVNVEVADVNDNPPRFFQLNYSIVVQ 3432
Query: 61 ENAEIGS 67
ENA +GS
Sbjct: 3433 ENAPLGS 3439
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T R LD E Y+ D + +L+ +T+TD NDNAP+FAS + S++
Sbjct: 2853 ITTLRELDCEVQEMYSFYVVASDHGRTIQLSSKALVEVTITDENDNAPQFASEVYRGSVI 2912
Query: 61 ENAEIG----SLSTVNATI 75
EN E G +L T++A I
Sbjct: 2913 ENGEPGEHVATLRTLDADI 2931
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
DRE+ Y + V+D P + + +++ D+NDN PEF + +I + E G
Sbjct: 2022 AFDREQQDAYVVAVEVRDDRHPPRVAQAAVKISIEDVNDNPPEFRHLPYYTAIQDGTEPG 2081
Query: 67 ----SLSTVNATIGVN 78
+S ++ IG N
Sbjct: 2082 DVLFQVSAIDLDIGAN 2097
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T + LDRE IA+Y L D A V + L DINDN+P+ ++ S+ +
Sbjct: 2961 KITTKKTLDREHIAKYLLKVTASDGKFQASTPVEVFVL---DINDNSPQCTKILYSSKVP 3017
Query: 61 ENAEIG----SLSTVNATIGVN 78
E+ G ++ + GVN
Sbjct: 3018 EDVLPGHFILQVTATDLDTGVN 3039
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITL--TLTDINDNAPEFASVINSAS 58
E+ LDRE +Y L +D+ + + S+ L TL+D+NDN P+ ++
Sbjct: 870 EVVVTGSLDRESQPQYVLKVEARDQAKVGHQLFSITNLVVTLSDVNDNTPQCIPELSQVK 929
Query: 59 ILENAEIGSLST 70
+ E+ +G++ T
Sbjct: 930 VPEDLPLGTVLT 941
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LD E + Y LN V D P + + + D NDN P F I E
Sbjct: 768 LKVAAPLDHETTSFYILNVTVYDLGTPQKSTWKHLAVNVGDENDNTPRFPPGGYQVEIRE 827
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 828 DIEVGT 833
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E ++ + D P +L+ + ++D+NDN P F A++
Sbjct: 2325 EMSTTQELDYETQQQFYVKVRAVDNGVPPLSAETLVIVNVSDVNDNPPAFRQPQYEANVS 2384
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2385 ELATCGQL 2392
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ Y L A D C + +T+ + D+NDNAP F S ++
Sbjct: 3062 ELTTLMLLDREEKDVYYLVAKATDGG--GRSCQADVTIRVEDVNDNAPRFFPSHCSVAVF 3119
Query: 61 ENAEI 65
+N +
Sbjct: 3120 DNTTV 3124
>gi|402872887|ref|XP_003900325.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B7-like [Papio
anubis]
Length = 1804
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 1277 KLVTDGALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 1336
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 1337 ENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLESRTL 1375
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE+ A + L D P L+++T+ D NDNAP F S+
Sbjct: 197 ELVLEHALDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDTNDNAPVFTLPEYRVSVP 256
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 257 ENLPVGTQLLTVTAT 271
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN--- 62
R LDRE+++ Y + D P L + DINDN P F+ V I EN
Sbjct: 412 RALDREQVSSYNITVTATDGGSPPLSTEIHFMLQVADINDNPPTFSHVSYFTYIPENNAR 471
Query: 63 -AEIGSLSTV------NATIGVNRCGHTFRGKDLRCY 92
A I S++ + NA I + T +G L Y
Sbjct: 472 GASIFSVTALDPDSKENARIIYSLAEDTIQGAPLSSY 508
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E+ Y + +Q D A+ + + +T+ D+NDN+PE A + +
Sbjct: 304 EIKISENLDYEETGFYEI--EIQAEDGGAYLATAKVLITVEDVNDNSPEVAITSLFSPVT 361
Query: 61 ENAEIGSL 68
E++ +G++
Sbjct: 362 EDSPLGTV 369
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C +I + D NDN+PE I+E++
Sbjct: 1177 TQQPLDFEEVERYTMNIEAKDRGSLSTRCKVII--EVLDENDNSPEIIITSLPDQIMEDS 1234
Query: 64 EIG 66
G
Sbjct: 1235 PPG 1237
>gi|332234718|ref|XP_003266552.1| PREDICTED: protocadherin beta-3 [Nomascus leucogenys]
Length = 796
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + I + + DINDNAPEFA + A++L
Sbjct: 193 ELVLDKALDREEQPELSLTLTALDGGAPPRSGTAQINIQVLDINDNAPEFAQPLYEAAVL 252
Query: 61 ENAEIGS-LSTVNAT 74
EN + S + TV+A+
Sbjct: 253 ENTPVNSVIVTVSAS 267
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE + Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVSEGALDRETRSEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+ + G N
Sbjct: 463 NNSPALHIGSVRATDRDSGTN 483
>gi|326673359|ref|XP_003199856.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 795
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE +Y + +D QP+ V +T+ ++D+NDN+PEF+S + ++E
Sbjct: 410 LVSTSPLDRETRFQYDITLVAKDAGQPSLSSVKTVTVIISDVNDNSPEFSSSPYAFYVME 469
Query: 62 NAEIG-SLSTVNAT 74
N G SL +V+A+
Sbjct: 470 NNAPGKSLFSVSAS 483
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE I + L D +PA IT+++ DINDN P F S + ENA I
Sbjct: 200 KALDREVIRNFDLQLIAVDGGKPAKSGTMTITISVLDINDNFPVFTKDAYSVMLSENAPI 259
Query: 66 G-SLSTVNAT 74
G ++ VNAT
Sbjct: 260 GTTVIRVNAT 269
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 4 TARGL-DREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T +GL D E RY ++ D+ +T+ + D+NDNAPE S SI E+
Sbjct: 305 TVKGLLDYEDKDRYEIDIQASDKGLIPLITDKTVTIKIVDVNDNAPEIEVTSLSNSIPED 364
Query: 63 AEIGSLSTVNATIGVNRCGHTFRGK 87
+ G T A I V+ GK
Sbjct: 365 SRPG---TTVALISVSDLDSGLNGK 386
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 451 LDRESTSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQELYHANVMEVADPGT 510
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ AR LD E + LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 873 IRIARPLDHEAKGQVLLNIQATAGEPPVYGHTQ-VNIEVEDVNDNAPEFEASLVRISVPE 931
Query: 62 NAEIGS 67
NA++G+
Sbjct: 932 NADLGA 937
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + + +T+ D+NDN P F A++
Sbjct: 226 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 285
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 286 ENATVGT 292
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE A Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1197 EISTREPLDRELRALYDLVVEARDQGTPVRSARVPVRVHVSDVNDNAPEIA 1247
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + Y L D QP E + ++ + + D+NDN P F S + E+A +G
Sbjct: 1313 LDHEERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAHVGH 1372
Query: 68 L 68
+
Sbjct: 1373 V 1373
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG---- 66
E + + T+ A +D QP + + +T+ D+NDN P F + S+ EN +G
Sbjct: 563 EPVPQLTVIA--RDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCIL 620
Query: 67 SLSTVNATIGVNRCGHTFRGKDLRCYNLFK 96
+S + GVN + G+ + F+
Sbjct: 621 KVSASDPDCGVNAMVNYTLGEGFKHLTEFE 650
>gi|149020622|gb|EDL78427.1| FAT tumor suppressor homolog 3 (Drosophila) [Rattus norvegicus]
Length = 2306
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S + L L D+NDN P F+S +A +
Sbjct: 834 ELKTLALLDRERVPVYNLIARATDGG--GRFCSSTVLLLLEDVNDNPPVFSSNHYTACVY 891
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 892 ENTATKALLTRVQAVDPDVGINR 914
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 1148 VKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE 1207
Query: 62 NAEIGS 67
N +G+
Sbjct: 1208 NKPVGT 1213
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E R+ L +D PA + +++ LTD+NDN P F+ + SA I E+A
Sbjct: 1048 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 1104
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 98 TARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELA 157
Query: 64 EIGSLST 70
G T
Sbjct: 158 PRGHFVT 164
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---- 61
R LDRE+ Y LN D + +++ +T++D+NDN+P V SAS+ E
Sbjct: 738 RPLDREEQDIYFLNITASD---GLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPS 794
Query: 62 NAEIGSLSTVNATIGVN 78
N I +S +A IG N
Sbjct: 795 NKIILKVSAKDADIGSN 811
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ + Y ++ D+ P SL +T+T+ DINDN P F ++ E+ +
Sbjct: 943 LDREQQSSYNISVRATDQ-SPGQSLSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSL 1001
Query: 66 G----SLSTVNATIGVN 78
G S+ + IG N
Sbjct: 1002 GTQVLSVFATSKDIGTN 1018
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E ++ D + + ++L+++ +TDINDNAP FA + ++
Sbjct: 625 ISTLKDLDHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVK 684
Query: 61 ENAEIGSLSTVNATI 75
E+ G + V +T+
Sbjct: 685 ESDPPGEVVAVLSTL 699
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1805 EFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1864
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1865 EDAPAGTL 1872
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F S + E
Sbjct: 1600 LSVVRSLDREQRAEHVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1659
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1660 NSPPGTSLLTLRAT 1673
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ IG
Sbjct: 2559 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRMAVPEDTPIG 2617
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F SV S + E
Sbjct: 1702 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSVHLSLEVPE 1761
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+ + A+ +G N
Sbjct: 1762 GQDPQTLTVLRASDPDVGAN 1781
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1161 EMTTLQTLDRERQSSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1217
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 205 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 264
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 265 ESLAPGS 271
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 426 ARQLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTF 471
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 100 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 153
Query: 62 NAEIGS 67
+ +G+
Sbjct: 154 HTALGT 159
>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
Length = 4557
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDRERVPMYSLIARATDGG--GRFCQSDIHLILEDVNDNPPVFSSDHYNACVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDVGINR 3164
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLLPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFLQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E ++ L +D PA V+ I++ +TD+NDN P F+ SA I E+A +G
Sbjct: 3299 LDYELCKKFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDALVG 3357
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTVERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +DR + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDRAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + L D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 2348 TARMLDHELVQHCILKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVFAHEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
Length = 4959
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+ E
Sbjct: 2008 LRIVDALDRELRSSYVLNITARDRGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAE 2067
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2068 NASIGAM 2074
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L QD P+ V + + + D NDNAP+F + + SI ENA
Sbjct: 884 LDREERDYYALTVSCQDSGDPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 943
Query: 65 -IGSLSTVNATIGVN 78
+G L V+ IG N
Sbjct: 944 FVGKLLAVDRDIGRN 958
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+++ Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2642 EIYTTMRLDREELSDYAFVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2700
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2701 ENAEIGSF 2708
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D+P+ V L+T+ +TD NDNAP +I +A +LE
Sbjct: 2545 GLDYELTHAYEIWVEASDGDRPSLRSVMLVTINVTDANDNAPIMDKLIYNAEVLE 2599
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1755 TAR-LDYEEVQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSYSSEVFENV 1813
Query: 64 EIG 66
G
Sbjct: 1814 PTG 1816
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L DR PA + + + + D+ND+ P F SA + E A GS
Sbjct: 468 LDREEIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 527
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 528 YVASITATDEDTGVNAQVHYEILSGNELKWFSI 560
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++TA LDRE IA Y+L D P + + + L D+NDN P FA +
Sbjct: 3382 EIRTAARLDREDIAHYSLVIGAIDTGLPPQTGSATVRIDLDDVNDNGPVFAPEGLLGYVS 3441
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T++AT
Sbjct: 3442 ENEPAGTSIMTLSAT 3456
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN VQD V+L+T+ LTD+NDN P F + EN +G+
Sbjct: 3072 LDYDLVQEYHLNITVQDLGFKPLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENKPVGT 3131
Query: 68 L 68
Sbjct: 3132 F 3132
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1322 IHTLREIDRESIDTFRLTVVATDRAQPSSRQLSTEKLVTVIVEDINDNAPIFVSM--NAA 1379
Query: 59 IL 60
IL
Sbjct: 1380 IL 1381
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE + Y L D P ++ + + DINDN P F ASI EN I
Sbjct: 2225 KQLDRETQSEYILTLVAMDTGSPPLTGTGIVRVEVQDINDNGPVFELQSYHASIQENLPI 2284
Query: 66 GSL 68
G+L
Sbjct: 2285 GTL 2287
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2746 ITVAGHLDREQEDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 2802
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T + LDRE +A Y + +D+ P + + + L++ DINDN PEF
Sbjct: 674 QLTTRKALDRETMANYEIFVIARDQGAPTPQSATATVYLSVLDINDNDPEF 724
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
+ TA LDRE+ A Y L QD +P V+L T+T+ D+NDN P+F S
Sbjct: 2325 ITTATVLDREETAVYHLTLMAQDSSITEPRASSVNL-TITVGDVNDNEPKFES 2376
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 237 LETTGNLDRESRGSYQLNISARDGGSPPRLGFLQVNVTILDVNDNPPIFDHSDYNVSLNE 296
Query: 62 NAEIGS 67
A G+
Sbjct: 297 TAVAGT 302
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y + V D Q + I + ++D NDN P F + S I ENA
Sbjct: 1656 LDRETKSKYDVRIRVSDGVQ---YTETYIAIEVSDTNDNPPMFEESVYSFDIPENAPRGY 1712
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1713 QVGQVVARDADLGQN 1727
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+ ARYTL +D + A + LI + + DINDN P F A +
Sbjct: 2113 VRVAKNLNYERNARYTLTVRAEDCAVENSASDTAELI-IGILDINDNRPTFLDSPYLARV 2171
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2172 MENTVPPNDGYVLTVNA 2188
>gi|119514203|gb|ABL75866.1| protocadherin 2A26 [Takifugu rubripes]
Length = 911
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LDRE ++ Y++ D P +++++ ++D+NDN P F+ + +A I EN ++
Sbjct: 408 RALDRETVSAYSVTIVASDGGTPFLTSSAVLSILISDVNDNPPLFSEPLINAYIGENMQV 467
Query: 66 GS-LSTVNAT-IGVNRCGH 82
G+ + TV AT + + + GH
Sbjct: 468 GAIIKTVTATDVDIEQNGH 486
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK A + D P S + + + DINDN P F+ + I
Sbjct: 190 ELVLQKALDREKQAVIRMTLTALDGGSPPKTGTSQLIINVLDINDNIPLFSQALYKTKIP 249
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ + TVNAT
Sbjct: 250 ENTSLGTRVITVNAT 264
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 4 TARG-LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
T +G +D E + + D+ QP + + + D+NDNAPE +S+ E+
Sbjct: 300 TVKGNIDFEDKRAFEIRVEASDKGQPPMSAHCKVLVEVLDVNDNAPELTVTSLHSSVRED 359
Query: 63 AEIG 66
A +G
Sbjct: 360 ANVG 363
>gi|426231061|ref|XP_004023513.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Ovis aries]
Length = 847
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P + ITL +TDINDNAP F +
Sbjct: 443 KLVTDGDLDREQTPEYNVTITATDRGKPPLSSSTTITLHITDINDNAPVFHQASYVVHVP 502
Query: 61 EN----AEIGSLSTVNATIGVNRCGH 82
EN A I +S + +G N GH
Sbjct: 503 ENNPPGAPIAQVSASDPDLGPN--GH 526
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ ++L D P + I +++ D NDN P F+ S+
Sbjct: 233 ELSLEKPLDREEQRSHSLILTAWDGGDPPRSATAQIEISVKDTNDNPPVFSQDEYRLSVS 292
Query: 61 ENAEIGS 67
EN GS
Sbjct: 293 ENLPPGS 299
>gi|395504762|ref|XP_003756716.1| PREDICTED: protocadherin gamma-A2 [Sarcophilus harrisii]
Length = 854
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+++ Y + V+D PA + I L + DINDN P F+ SA I E
Sbjct: 404 LMIDRALDREQVSVYNITVRVEDFGSPALSTDTHILLQVADINDNPPTFSQSAYSAYIQE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + +D QP I +T+ D NDNAP F + S ++
Sbjct: 193 ELVLEQALDREEQHNLHMVLLARDGGQPVLSGTVRIRVTVLDANDNAPVFTQSVYSVNVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN G+ L TVNAT
Sbjct: 253 ENVPQGTVLLTVNAT 267
>gi|345793773|ref|XP_544297.2| PREDICTED: protocadherin beta-2 [Canis lupus familiaris]
Length = 791
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 404 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 464 NNSPALHIGTVSATDRDAGAN 484
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A L D P +L+ + + D NDNAPEF + +L
Sbjct: 194 QLVLDKALDREERAEIRLTLTALDGGPPPRSGTALVRIEVLDSNDNAPEFTKLFYEVQVL 253
Query: 61 ENAEIG----SLSTVNATIGVN 78
E++ IG +S + IG N
Sbjct: 254 EDSPIGFQVAMVSARDLDIGTN 275
>gi|195454072|ref|XP_002074073.1| GK12811 [Drosophila willistoni]
gi|194170158|gb|EDW85059.1| GK12811 [Drosophila willistoni]
Length = 1984
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K ++ LD E+ ++ D+P+ + + + + D NDN PEF I +AS+LE
Sbjct: 451 VKNSKSLDFEQFVEVNFTIFAREIDEPSRYSSAHVQIFIRDQNDNYPEFTQTIYNASVLE 510
Query: 62 NAEIGSLST-VNAT 74
N+E+G++ T V AT
Sbjct: 511 NSELGTIITKVEAT 524
>gi|359318948|ref|XP_003638955.1| PREDICTED: protocadherin beta-4-like [Canis lupus familiaris]
Length = 795
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+T++D+NDNAP F+ + + E
Sbjct: 402 LVTESPLDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S + G N
Sbjct: 462 NNSPALHIGTVSATDRDAGAN 482
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++L D P + + + + D+NDNAPEF +L
Sbjct: 192 DLVQDKALDREEQPEFSLTLMALDGGSPPRSGTTAVRILIMDVNDNAPEFVHSPYEVQVL 251
Query: 61 ENAEIGS 67
EN+ I S
Sbjct: 252 ENSPIDS 258
>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
Length = 4555
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S + L L D+NDN P F+S +A +
Sbjct: 3083 ELKTLALLDRERVPVYNLIARATDGG--GRFCSSTVLLLLEDVNDNPPVFSSNHYTACVY 3140
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3141 ENTATKALLTRVQAVDPDVGINR 3163
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3397 VKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE 3456
Query: 62 NAEIGS 67
N +G+
Sbjct: 3457 NKPVGT 3462
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D +P L+T+ + D NDN+P F S SIL
Sbjct: 781 QLKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSIL 840
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 841 ESSSIGT 847
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1517 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1576
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1577 SAALGSV 1583
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E R+ L +D PA + +++ LTD+NDN P F+ + SA I E+A
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 888 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLED 947
Query: 63 AEIGSL 68
+G++
Sbjct: 948 LPVGTV 953
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 2347 TARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELA 2406
Query: 64 EIGSLST 70
G T
Sbjct: 2407 PRGHFVT 2413
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1832 IRTIANLDHEVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1891
Query: 60 LENAEIG 66
L +G
Sbjct: 1892 LLPTYVG 1898
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---- 61
R LDRE+ Y LN D + +++ +T++D+NDN+P V SAS+ E
Sbjct: 2987 RPLDREEQDIYFLNITASD---GLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPS 3043
Query: 62 NAEIGSLSTVNATIGVN 78
N I +S +A IG N
Sbjct: 3044 NKIILKVSAKDADIGSN 3060
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ + Y ++ D+ P SL +T+T+ DINDN P F ++ E+ +
Sbjct: 3192 LDREQQSSYNISVRATDQ-SPGQSLSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSL 3250
Query: 66 G----SLSTVNATIGVN 78
G S+ + IG N
Sbjct: 3251 GTQVLSVFATSKDIGTN 3267
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E ++ D + + ++L+++ +TDINDNAP FA + ++
Sbjct: 2874 ISTLKDLDHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVK 2933
Query: 61 ENAEIGSLSTVNATI 75
E+ G + V +T+
Sbjct: 2934 ESDPPGEVVAVLSTL 2948
>gi|395508556|ref|XP_003758576.1| PREDICTED: cadherin-1 [Sarcophilus harrisii]
Length = 884
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
LK LDRE IA+Y L +H V QP + + ++ + +TD NDN PEF + S++
Sbjct: 215 LKVTMPLDREHIAKYVLYSHAVSSNGQPVEDPMEIV-IRVTDQNDNRPEFTQEVFRGSVM 273
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ V+AT
Sbjct: 274 EGAHPGTSVMQVSAT 288
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE I YTL D D + +T+TD NDN P F ++ EN
Sbjct: 333 GLDRESIPEYTLIVQAADLDGEGLSTTATAVITVTDTNDNPPIFNPTTYVGTVPENEVDA 392
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 393 VITTLKVT 400
>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
Length = 5086
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ LDRE + Y LN +DR +P + + + + D NDN+P F SAS+ E
Sbjct: 2137 LRIVDALDRELRSSYVLNITARDRGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAE 2196
Query: 62 NAEIGSL 68
NA IG++
Sbjct: 2197 NASIGAM 2203
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L QD P+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1041 LDREERDYYALTVSCQDSGDPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1100
Query: 65 -IGSLSTVNATIGVN 78
+G L V+ IG N
Sbjct: 1101 FVGKLLAVDRDIGRN 1115
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+++ Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2771 EIYTTMRLDREELSDYAFVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2829
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2830 ENAEIGSF 2837
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D+P+ V L+T+ +TD NDNAP +I +A +LE
Sbjct: 2674 GLDYELTHAYEIWVEASDGDRPSLRSVMLVTINVTDANDNAPIMDKLIYNAEVLE 2728
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1884 TAR-LDYEEVQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSYSSEVFENV 1942
Query: 64 EIG 66
G
Sbjct: 1943 PTG 1945
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L DR PA + + + + D+ND+ P F SA + E A GS
Sbjct: 396 LDREEIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 455
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 456 YVASITATDEDTGVNAQVHYEILSGNELKWFSI 488
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + + Y LN VQD V+L+T+ LTD+NDN P F + EN +G+
Sbjct: 3201 LDYDLVQEYHLNITVQDLGFQPLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENKPVGT 3260
Query: 68 L 68
Sbjct: 3261 F 3261
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE IA Y+L D P + + + L D+NDN P FA +
Sbjct: 3511 EISTAARLDREDIAHYSLVIGAIDTGLPPQTGSATVRIDLDDVNDNGPVFAPEGLLGYVS 3570
Query: 61 ENAEIG-SLSTVNAT 74
EN G S+ T++AT
Sbjct: 3571 ENEPAGTSIMTLSAT 3585
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1451 IHTLREIDRESIDTFRLTVVATDRAQPSSRQLSTEKLVTVIVEDINDNAPIFVSM--NAA 1508
Query: 59 IL 60
IL
Sbjct: 1509 IL 1510
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE + Y L D P ++ + + DINDN P F ASI EN I
Sbjct: 2354 KQLDRETQSEYILTLVAMDTGSPPLTGTGIVRVEVQDINDNGPVFELQSYHASIQENLPI 2413
Query: 66 GSL 68
G+L
Sbjct: 2414 GTL 2416
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2875 ITVAGHLDREQEDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 2931
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T + LDRE +A Y + +D+ P + + + L++ DINDN PEF
Sbjct: 602 QLTTRKTLDRETMANYEIFVIARDQGAPTPQSATATVYLSVLDINDNDPEF 652
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFAS 52
+ TA LDRE+ A Y L QD +P V+L T+T+ D+NDN P+F S
Sbjct: 2454 ITTATVLDREETAVYHLTLMAQDSSITEPRASSVNL-TITVGDVNDNEPKFES 2505
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y + V D Q + I + ++D NDN P F + S I ENA
Sbjct: 1785 LDRETKSKYDVRIRVSDGVQ---YTETYIAIEVSDTNDNPPMFEESVYSFDIPENAPRGY 1841
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1842 QVGQVVARDADLGQN 1856
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+ ARYTL +D + A + LI + + DINDN P F A +
Sbjct: 2242 VRVAKNLNYERNARYTLTVRAEDCAVENSASDTAELI-IGILDINDNRPTFLDSPYLARV 2300
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2301 MENTVPPNDGYVLTVNA 2317
>gi|166837996|gb|ABY91218.1| protocadherin delta 1 [Gallus gallus]
Length = 962
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y ++ +D PA S +T+ ++D+NDNAP F S ++E
Sbjct: 411 LVTTEPLDREAVSEYNISITARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVME 470
Query: 62 NAEIG-SLSTVNA 73
N G S+ +V+A
Sbjct: 471 NNAPGASICSVSA 483
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + + L +DR A + + L D+NDNAPE S + E+A G
Sbjct: 312 LDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVQEDAPPG- 370
Query: 68 LSTVNATIGV 77
TV A I V
Sbjct: 371 --TVIAVISV 378
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P + + +T+ D NDN P F S+
Sbjct: 197 ELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVTVLDANDNIPAFDQPSYGVSLP 256
Query: 61 ENAEIGSLS-TVNAT 74
E+A G+L +NAT
Sbjct: 257 EDAPAGTLVIQLNAT 271
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ D P + + ++L DINDN+P F V A I E
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E+A +G
Sbjct: 207 GLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG 266
Query: 67 S 67
S
Sbjct: 267 S 267
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-------DQPAWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D + A V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1364 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIP 1423
Query: 65 IGS 67
+G+
Sbjct: 1424 LGT 1426
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S + +
Sbjct: 847 QLTTASVIDREEQSFYQLKIVASG---GAVTGDTVVNITVKDLNDNAPHFLQAVESINAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D +++ + D NDN P F +LEN IG
Sbjct: 1262 LDYEATSAYSLLIQAVDSGAIPLNSTCTLSINILDENDNTPSFPKSTLFVDVLENMRIGE 1321
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1322 LVSSVTAT 1329
>gi|395504780|ref|XP_003756725.1| PREDICTED: protocadherin gamma-A10-like [Sarcophilus harrisii]
Length = 821
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D PA + +T+ D NDNAP F + S SI
Sbjct: 193 ELVLERALDREEKPVHHLILTAADGGDPAHSGTVQVLVTVLDANDNAPVFTQSVYSVSIP 252
Query: 61 ENAEIGS-LSTVNAT---IGVN-RCGHTFRGKDLRCYNLFK 96
EN G+ L VNAT GVN ++FR ++ + +F+
Sbjct: 253 ENVPKGTLLLAVNATDPDEGVNGEVTYSFRRQNEKSLQIFQ 293
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDREK++ Y + D+ P I L + D NDN P F+ SA + E
Sbjct: 404 LVTNGALDREKVSAYNITITAVDQGTPPLSVDIHIFLQVADTNDNPPIFSQASYSAYVKE 463
Query: 62 N 62
N
Sbjct: 464 N 464
>gi|390459363|ref|XP_003732287.1| PREDICTED: protocadherin gamma-A2-like [Callithrix jacchus]
Length = 866
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA+ LDRE+++ Y ++ D P + ITL + DINDN P F SA I E
Sbjct: 411 LVTAKSLDREQMSEYNISLRATDGGSPPLSTETHITLHVIDINDNPPTFPQFSYSAYIPE 470
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I T +G L Y
Sbjct: 471 NNPRGASIFSVTAQDPDSNNNARITYALIEDTLQGAHLSSY 511
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P S I + + D+NDNAP F S+L
Sbjct: 196 ELVLERALDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDVNDNAPVFTQPEYRVSVL 255
Query: 61 ENAEIGS-LSTVNAT 74
EN + + + TV AT
Sbjct: 256 ENTPVDTRILTVTAT 270
>gi|327270347|ref|XP_003219951.1| PREDICTED: protocadherin-1-like [Anolis carolinensis]
Length = 1234
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE+ Y L VQD P +L+ +T+ D+NDNAP+F A + EN+ IG
Sbjct: 239 LDREQSESYDLTIKVQDGGSPPRASSALLRITILDMNDNAPKFEKPTYEAELSENSPIG 297
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+ RY D+ P+ + + + + + D NDN P+F + S++
Sbjct: 564 EIRVKTVLDREQRERYEFLVVAADKGSPSRKGTASVAINVMDRNDNDPKFMLSGYNFSVM 623
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN + +G ++ ++A G N
Sbjct: 624 ENMPPLSPVGMVTVIDADKGEN 645
>gi|119514180|gb|ABL75843.1| protocadherin 2A3 [Takifugu rubripes]
Length = 955
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 408 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 467
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 468 ENNAPGAL 475
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDR++ + + L D +PA + + + + D NDN+P F + I+
Sbjct: 195 ELILKKALDRDQQSVHNLILTAVDGGKPARSGTASVIVRVLDTNDNSPTFDKSNYNLEIM 254
Query: 61 ENAEIGSLST-VNAT 74
EN+ IGSL +NAT
Sbjct: 255 ENSPIGSLVIHLNAT 269
>gi|410913697|ref|XP_003970325.1| PREDICTED: protocadherin-10-like [Takifugu rubripes]
Length = 818
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 402 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 461
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 462 ENNAPGAL 469
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + + L D +PA I + + D NDN+P F + I+
Sbjct: 189 ELILTKVLDREQQSVHNLILTAVDGGKPARSGTVTIVVHVLDTNDNSPTFDKSNYNLEIM 248
Query: 61 ENAEIGSLST-VNAT 74
EN+ IGSL +NAT
Sbjct: 249 ENSPIGSLVIHLNAT 263
>gi|363738882|ref|XP_001231879.2| PREDICTED: protocadherin-10 [Gallus gallus]
Length = 966
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE ++ Y ++ +D PA S +T+ ++D+NDNAP F S ++E
Sbjct: 411 LVTTEPLDREAVSEYNISITARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVME 470
Query: 62 NAEIG-SLSTVNA 73
N G S+ +V+A
Sbjct: 471 NNAPGASICSVSA 483
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E+ + + L +DR A + + L D+NDNAPE S + E+A G
Sbjct: 312 LDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVQEDAPPG- 370
Query: 68 LSTVNATIGV 77
TV A I V
Sbjct: 371 --TVIAVISV 378
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ + L D P + + +T+ D NDN P F S+
Sbjct: 197 ELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVTVLDANDNIPAFDQPSYGVSLP 256
Query: 61 ENAEIGSLS-TVNAT 74
E+A G+L +NAT
Sbjct: 257 EDAPAGTLVIQLNAT 271
>gi|94369682|ref|XP_143371.6| PREDICTED: similar to cadherin protein [Mus musculus]
Length = 2842
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE I+ +TL D P + + + D ND++P F + +SI
Sbjct: 1358 ELSTTRALDRELISNFTLTILCSDLGNPPRSSAMQLHVRVLDDNDHSPAFPMLHYQSSIR 1417
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1418 EDAEVGTVVLVLSAVDRDEGLN 1439
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE A + L D P S+I + + DINDNAP F+S A + E+ +G
Sbjct: 2096 ALDREASASHKLVILASDHGCPPLSSTSVIAIDILDINDNAPTFSSRHYQAHVKESTPVG 2155
Query: 67 SLSTV 71
S T+
Sbjct: 2156 SHITM 2160
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA DRE + L V+D P+ + I T+ D ND+APEF + + IL
Sbjct: 1254 EVVTAVTFDREAQGIFRLRVLVRDGGVPSLSSTADIICTIEDENDHAPEFIVLHHDIEIL 1313
Query: 61 ENAEIGSLSTVNA 73
EN + + TV A
Sbjct: 1314 ENRDPEVVYTVLA 1326
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E Y+L DR P +L+ + +TDINDNAP F
Sbjct: 1779 LDYESSGSYSLIVQATDRGVPRLSGTALVKIQVTDINDNAPVF 1821
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASI 59
+L + LD E + Y + +D Q PAW +++ + D N+++P F SI
Sbjct: 934 DLFLTKELDYEMTSHYLIRVISKDHSQSPAWNSTVFLSIDVEDQNEHSPSFQDEFIVISI 993
Query: 60 LENAEIGSLSTV-NATIG 76
EN +G+L V NA G
Sbjct: 994 EENVPVGTLVYVFNAKDG 1011
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ A LD E ++ L D PA +T+T+ D+ND P F ++ S+ E
Sbjct: 1150 LRIACPLDYEVKTQHILTLVAHDGGMPARSSSQTLTITVLDVNDETPAFKQLLYETSVKE 1209
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1210 NQSPGVFVT 1218
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS-- 58
EL LDRE + + V D P L+ +T+TDINDN P F +
Sbjct: 720 ELINWLALDREHQGHHQITVLVTDHGSPPRNATMLVYVTITDINDNWPFFPQCLPGKEFH 779
Query: 59 --ILENAEIGSLST 70
+LE + +L T
Sbjct: 780 FKVLEGQPVNTLVT 793
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST 70
EKI D P+ ++L+ + + D+N+ APEF + + S+ E+ IGS
Sbjct: 1984 EKIPTLRFLVEANDGGIPSLTALTLVEIEIQDVNNYAPEFPAGCYNLSLSEDTPIGSTLM 2043
Query: 71 VNATI 75
+TI
Sbjct: 2044 TFSTI 2048
>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
Length = 4342
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I Y+L D P +T+T++D+NDN P F+ + +S + E +GS
Sbjct: 3378 LDREEITHYSLTVQAADEGDPPLSSAVQVTVTVSDVNDNPPMFSKINHSLIVQEGEAVGS 3437
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
+K LDRE RY L +D+ +P + S + + L DINDN P+F + +
Sbjct: 875 VKVIGPLDRETFRRYDLTIEARDQAKPDPQLFSFTDVVVVLEDINDNPPKFVPTVYKIKV 934
Query: 60 LENAEIGSL 68
E+ G++
Sbjct: 935 PEDVPPGTV 943
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK LDRE+ Y LN V D P L+ + + D NDN P F+ +I
Sbjct: 771 DLKVICALDREQKEFYILNITVYDLGYPQTSTWKLLAVNILDANDNPPLFSQSRYVVTIP 830
Query: 61 ENAEIG-SLSTVNA 73
EN E+ S+ VNA
Sbjct: 831 ENTEVDKSIFKVNA 844
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LD E ++TL D+ P + I + + D+NDN P+F+ AS+ E
Sbjct: 2326 LVTTQVLDYESTQQFTLKVKATDKGVPPLSGEAHIIVNVIDVNDNPPDFSEPSYRASLDE 2385
Query: 62 NAEIGSL 68
A G++
Sbjct: 2386 MATCGNI 2392
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
+ T LDRE+ A + + V D+ +P + + + + D NDN+P+F+
Sbjct: 1193 ISTLSSLDREQKAEHIIEVMVSDKGEPPLSSTATVVIEVLDENDNSPQFS 1242
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ Y L V+ D C + +TL + D+NDN P+F++ ++
Sbjct: 3059 ELFTLAVLDREREKEYDL--VVKATDGGGRSCQADVTLMVQDMNDNPPQFSTSHYEVTVF 3116
Query: 61 ENAEIGSLSTV----NATIGVN-RCGHTFRGKDLRCYNL 94
+N I + V + G+N ++ +G D ++L
Sbjct: 3117 DNTTIRTPIAVIYAKDPDTGINSEVRYSLQGADSGFFSL 3155
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T++ LD E Y + D E V+ + + +TD NDNAP F AS+ EN
Sbjct: 419 TSQSLDFENRNHYEFDVTAND-----GEAVTRVIVDITDENDNAPSFTLPSYQASLPENV 473
Query: 64 EIGSLSTVNATIGVNRCGHTF 84
IG+ + I V++ + F
Sbjct: 474 RIGTSVLSVSAIDVDKDNNGF 494
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + Y L + +D + + + + DINDN PE + + S+ E
Sbjct: 1089 IQTAGLLDREVVPHYWLTVYAKDLGTIPLVSWTEVYIEVWDINDNPPELSQPVYFGSVQE 1148
Query: 62 N 62
N
Sbjct: 1149 N 1149
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNA--PEFASVINSAS 58
L R LD EK Y L D +P + I + + D+N+N P F ++++A+
Sbjct: 981 LTLERELDFEKRQFYNLTVRAVDHGKPRSLSSSCFIEIEVLDVNENLNRPLFGEMVHTAA 1040
Query: 59 ILENAEIGS 67
++E+A+IG+
Sbjct: 1041 VMEDAKIGT 1049
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 35 LITLTLTDINDNAPEFASVINSASILENAEIG 66
L+ +TLTD NDN P+F + SILEN+ G
Sbjct: 2884 LVEVTLTDENDNPPQFTEELYQGSILENSRPG 2915
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQP---AWECVSLITLTLTDINDNAPEFASVINSA 57
+ T++ D E + R Y L D P EC +T+T+T++NDN P F V +A
Sbjct: 516 ISTSQEFDYELMKRWYHLRIWASDSGNPFNRVSECT--VTITMTNVNDNVPVFERVACNA 573
Query: 58 SILENAEIGSL 68
SI + +G +
Sbjct: 574 SIPRDFAVGEI 584
>gi|281337853|gb|EFB13437.1| hypothetical protein PANDA_009560 [Ailuropoda melanoleuca]
Length = 3367
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S I L L D+NDN P F+S +A +
Sbjct: 1862 ELKTLALLDRERVPMYSLIARATDGG--GRFCQSDIHLILEDVNDNPPVFSSDHYNACVY 1919
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 1920 ENTATKALLTRVQAVDPDVGINR 1942
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 2176 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 2235
Query: 62 NAEIGS 67
N +G+
Sbjct: 2236 NKPVGT 2241
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E ++ L +D PA V+ I++ +TD+NDN P F+ SA I E+A +G
Sbjct: 2077 LDYELCKKFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDALVG 2135
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 296 LYTVERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 355
Query: 62 NAEIGS 67
+A +GS
Sbjct: 356 SAALGS 361
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 611 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 670
Query: 60 LENAEIG 66
L +G
Sbjct: 671 LLPTYVG 677
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + L D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 1126 TARMLDHELVQHCILKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELA 1185
Query: 64 EIGSLST 70
G T
Sbjct: 1186 PRGHFVT 1192
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 1653 ISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVFAHEVYRGNVK 1712
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 1713 ESDPPGEVVAVLST 1726
>gi|301753531|ref|XP_002912649.1| PREDICTED: protocadherin beta-10-like [Ailuropoda melanoleuca]
Length = 799
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK TL D P + I + + DINDNAP+F+ I
Sbjct: 193 ELVLDKALDREKQHELTLTLTALDGGSPPRSGTTTIRIVILDINDNAPQFSQTIYETQAP 252
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 253 ENSPVGSL 260
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T GLDRE A Y + V D P + +++T++D+NDNAP F+ + + E
Sbjct: 403 LMTEGGLDRESQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDAGAN 483
>gi|223647638|gb|ACN10577.1| Epithelial cadherin precursor [Salmo salar]
Length = 881
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
A GLDREKI +YTL D + +TLTD NDNAP+F + + S+ EN
Sbjct: 334 APGLDREKIPKYTLAIQAADMEGNGLTSFGKAIITLTDSNDNAPQFVTPSYTVSVPEN 391
>gi|194219840|ref|XP_001502292.2| PREDICTED: protocadherin beta-2-like [Equus caballus]
Length = 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ + L D P +L+ + + DINDNAPEFA+++ +
Sbjct: 195 QLVLDKALDREEQPEFRLTLTAVDGGTPPRSGTALVRIEVLDINDNAPEFANLLYEVQVP 254
Query: 61 ENAEIGS-LSTVNAT 74
EN+ IGS ++ V+A+
Sbjct: 255 ENSPIGSQVAVVSAS 269
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 405 LVTNTALDRESRAEYNITITVTDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRE 464
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 465 NNSPALHIGSVSATDTDAGAN 485
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E I YTLN D + CV + + D+NDN PE + I
Sbjct: 302 ELLLTQKLDFESIQTYTLNVQATDGGGLSGSCVVFV--QVMDLNDNPPELTMSTLISEIA 359
Query: 61 ENAE 64
EN +
Sbjct: 360 ENLQ 363
>gi|194219814|ref|XP_001502214.2| PREDICTED: protocadherin gamma-A1 [Equus caballus]
Length = 811
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE ARY + D+ P I+L + DINDN P F SA ILE
Sbjct: 404 LVTERTLDRELTARYNITITATDQGTPTLSTEMHISLQVMDINDNPPTFPQDSYSAYILE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
>gi|119514233|gb|ABL75896.1| protocadherin 2G21 [Takifugu rubripes]
Length = 952
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ TL D P I +T+ D NDNAP F + ASI+
Sbjct: 195 EMVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVYKASIM 254
Query: 61 ENAEIGS-LSTVNAT 74
EN +IG+ + TVNAT
Sbjct: 255 ENTKIGTNVVTVNAT 269
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
DRE +++Y + D P + + L ++D+NDNAP F SA I+EN G+
Sbjct: 412 FDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYIVENNSPGT 471
>gi|126290877|ref|XP_001377277.1| PREDICTED: protocadherin alpha-8-like [Monodelphis domestica]
Length = 810
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+++ Y L D +P + +T+ D+NDNAP F IL
Sbjct: 193 ELVLKKPLDREEVSEYHLILTATDGGKPELSGTLQVLITVLDVNDNAPTFDRSEYEVKIL 252
Query: 61 ENAEIGS----LSTVNATIGVNR 79
ENA G+ L+ +A G+NR
Sbjct: 253 ENAASGTLVIKLNASDADEGINR 275
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
+DRE + Y L +D PA + +++ + D+NDNAP F + + + EN GS
Sbjct: 413 VDRESVPAYELVVTARDGGLPALWATASVSVVIGDVNDNAPAFEQSLYTVFVKENNPPGS 472
Query: 68 -LSTVNAT 74
+ TV+A+
Sbjct: 473 HIFTVSAS 480
>gi|449475306|ref|XP_002191783.2| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
Length = 944
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ +Y L+ D P T+ ++D+NDNAP F + +
Sbjct: 528 ELVTVSALDREETPQYILSVTAADAGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVR 587
Query: 61 EN----AEIGSLSTVNATIGVN 78
EN +G++S +A +G+N
Sbjct: 588 ENNVPTVFVGAVSAGDADVGLN 609
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A + D P + + + + D+NDNAP F A +L
Sbjct: 318 ELVLEKPLDREEHAEMGFSVIALDGGSPPRSGTTQVKIDILDVNDNAPIFTQEEYIAQVL 377
Query: 61 ENAEIGSLS-TVNAT 74
EN GS+ TV AT
Sbjct: 378 ENMPEGSVVLTVLAT 392
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LD E + + L V+ RD + + + + D+NDNAPE S+ I
Sbjct: 425 EIKLTKPLDFEAVETHELT--VRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPIP 482
Query: 61 ENAEIGSL 68
EN G++
Sbjct: 483 ENTVPGTV 490
>gi|66773216|ref|NP_001019371.1| protocadherin 2 gamma 28 precursor [Danio rerio]
gi|51557455|gb|AAU06414.1| protocadherin cluster 2 gamma 28 [Danio rerio]
Length = 957
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDREKI+ Y + D P++ +TL ++D+NDNAP F +A I+E
Sbjct: 413 LITDQLLDREKISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTAFIME 472
Query: 62 NAEIG 66
N G
Sbjct: 473 NNSPG 477
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE + L D P I +T+ D NDNAP F+ + S+
Sbjct: 202 EMVLQAPLDRETQHEHKLTLTAFDGGNPQKTGTVRICVTVIDANDNAPVFSLPVYRVSLF 261
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 262 ENAPNGAV 269
>gi|86355127|dbj|BAE78798.1| E-cadherin [Pelodiscus sinensis]
Length = 641
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+I+ YTL +H + E I +T+TD NDN PEF + + S+ E
Sbjct: 53 LKVTQPLDREEISNYTLFSHAVSANGLPVEDPMEIIITVTDQNDNKPEFTQQVFTGSVEE 112
Query: 62 NAEIG-SLSTVNAT 74
A+ G S+ V AT
Sbjct: 113 GAKPGTSVMRVTAT 126
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A GLDRE YTL D + + + + +TD NDN P F + +A++ EN E
Sbjct: 169 ATGLDRETTPNYTLIVLATDMEGKGFAATATALIEVTDANDNPPVFDPLTYNAAVPEN-E 227
Query: 65 IGSL 68
+G L
Sbjct: 228 VGVL 231
>gi|431916497|gb|ELK16475.1| Protocadherin Fat 3 [Pteropus alecto]
Length = 2947
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E +Y L +D PA V+ + + LTD+NDN P+F+ + SA I E+A +G
Sbjct: 2093 LDYELCKKYYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDASVG 2151
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y+L A D C S + L L D+NDN P F+S + +
Sbjct: 1878 ELKTLALLDRERVPAYSLIARATDGG--GRFCQSDVRLILEDVNDNPPVFSSDHYNTCVY 1935
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 1936 ENTATKALLTRVQAVDPDVGINR 1958
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 312 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 371
Query: 62 NAEIGS 67
+A +GS
Sbjct: 372 SAALGS 377
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++DINDN P F +I + + E A
Sbjct: 1142 TARMLDYELVQHCTLKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELA 1201
Query: 64 EIGSLST 70
G T
Sbjct: 1202 PRGHFVT 1208
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E I+ + + HV+D P S + + +TD+NDN P F + +
Sbjct: 627 IRTIATLDHETISHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 686
Query: 60 LENAEIG 66
L IG
Sbjct: 687 LLPTYIG 693
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L + + + + ++D+NDN+P F +A I E
Sbjct: 2192 VKVKKKLDRERVSGYSLLVQAKK---------ATVNIDISDVNDNSPVFTPANYTAVIQE 2242
Query: 62 NAEIGS 67
N +G+
Sbjct: 2243 NKPVGT 2248
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 1669 ISTLKDLDHETDPSFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAHEVYQGNVK 1728
Query: 61 ENAEIGSLSTVNAT 74
E+ G + + +T
Sbjct: 1729 ESDPPGEVVAILST 1742
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LD E+ + Y L D QP + I + + D+NDN P F + S ++
Sbjct: 3371 ELQVAKALDWEQTSSYLLRLRATDSGQPPLHEDTDIDIQVVDVNDNPPRFFQLNYSTTVQ 3430
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3431 ENSPIGS 3437
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA+ LD E + + DR P +L+ + ++DINDN PEF A++
Sbjct: 2322 EMSTAQELDYEAQQHFHMKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2381
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2382 ELATCGHL 2389
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LD E + Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 764 LSVSAPLDYEATSFYILNITVYDLGTPPKSSWKLLTVNVIDWNDNAPRFPPGGYQVTISE 823
Query: 62 NAEIGS 67
+AE+GS
Sbjct: 824 DAEVGS 829
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDREK Y L A D C + +TL + D+NDNAP F S ++
Sbjct: 3060 ELTTFRALDREKKDVYNLVAKATDGG--GRSCQADVTLHVEDVNDNAPRFFPSHCSVAVF 3117
Query: 61 ENAEI 65
+N +
Sbjct: 3118 DNTTV 3122
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TAR LDRE + L V D +P + S + + + D+NDN P F+
Sbjct: 1186 LSTARKLDRENKDEHILEVTVLDNGEPPLKSTSRVVVRVLDVNDNPPVFS 1235
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LD E +Y L+ + + ++ I + +TD+N++ P F + S +LE
Sbjct: 3267 LYVNRSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNITDVNEHQPRFLQDLYSVKVLE 3326
Query: 62 NAEIGSLS-TVNAT--------------IGVNRCGH 82
NA +G + TV+AT +G N+ GH
Sbjct: 3327 NAIVGDIILTVSATDEDGPLNNAITYSLVGGNQLGH 3362
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y+ D Q +LI +++TD NDNAP FAS ++
Sbjct: 2851 ITTLQELDSETRQSYSFYVVAYDHGQTLQLSSEALIEVSITDENDNAPRFASEDYRGFVV 2910
Query: 61 ENAEIGSLSTVNATI 75
EN+E G L T+
Sbjct: 2911 ENSEPGELVATLKTL 2925
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE I+ Y L D+ V+ + + +TD+NDN P + + S+ E
Sbjct: 1081 IQTTAPLDREFISYYWLTVLAVDKGSVPLSSVTEVYIEVTDVNDNPPRISRPVFYPSVRE 1140
Query: 62 NAEIGS 67
+A + +
Sbjct: 1141 DAPLNT 1146
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP----AWECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE ++Y L V+ RDQP V+ + +TL D NDN+P+ + ++S
Sbjct: 866 ELVVTGHLDRESESQYILK--VEARDQPRKGHQLFSVTDLIVTLEDANDNSPQCFTELSS 923
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 924 LKVPEDLPPGTILT 937
>gi|74149748|dbj|BAE43867.1| Protocadherin alpha [Macaca fuscata]
Length = 949
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I +TL D +P + +T+ D+NDNAPEF + ++LENA
Sbjct: 198 KTLDREEIQEHTLLLTASDGGKPELTGTVQLLITILDVNDNAPEFYQSVYKVTMLENAFN 257
Query: 66 GSLS-TVNAT 74
G+L +NAT
Sbjct: 258 GTLVIKLNAT 267
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE ++ Y L +D P+ + +++ + D+NDNAP FA + + EN G
Sbjct: 412 ALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQSEYTVFVKENNPPG 471
>gi|432929722|ref|XP_004081245.1| PREDICTED: cadherin-18-like [Oryzias latipes]
Length = 796
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ + LDRE+ A Y L+A DR+ + A E S + + DINDNAP+F A++
Sbjct: 110 DIHATKSLDRERKAHYVLHAQALDRNTEEALEPKSEFIIKVQDINDNAPKFPDGPFEATV 169
Query: 60 LENAEIG-SLSTVNAT 74
E +E+G S+ V AT
Sbjct: 170 PEMSEVGTSVLQVTAT 185
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL-----ITLTLTDINDNAPEFASVINSASILEN 62
+DRE YT+ +D A + L I +TLTD+NDN P+F +LE+
Sbjct: 225 MDREAREHYTVVIQAKDM---AGQVGGLSGSTTINITLTDVNDNPPKFPQKNYQVLVLES 281
Query: 63 AEIGS 67
AE+G+
Sbjct: 282 AEVGT 286
>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4611
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE I ++L D P +L+ + ++D+NDN P F+S +A I E
Sbjct: 3426 IKVNKPLDRETIPSFSLTIRALDSGVPPMSSTALVNIDVSDVNDNPPTFSSANLTAVIQE 3485
Query: 62 NAEIGS 67
N IG+
Sbjct: 3486 NKPIGT 3491
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E Y L +D P V+ + + LTD+NDNAP F+ + +A + E+A
Sbjct: 3324 AQPLDYETCRDYFLTVEARDGGTPPLSAVTTVNINLTDVNDNAPMFSRDLYTAFVSEDAF 3383
Query: 65 IGSL 68
IG
Sbjct: 3384 IGEF 3387
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E A++ L V+D+D P + ++ + + + DIND+ P F S + S+ E+A
Sbjct: 1539 TTQRLDHEACAQHILTVLVKDQDFPYRKNLARVLIEVEDINDHVPIFTSPLYEGSVYESA 1598
Query: 64 EIGS 67
GS
Sbjct: 1599 AKGS 1602
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 31/67 (46%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E Y D PA +T+TL D+NDNAP F ++ A + E A
Sbjct: 2367 TARMLDHELAHNYYFVVRATDNGYPALSSEVTVTVTLNDMNDNAPVFNQLLYEAYVSELA 2426
Query: 64 EIGSLST 70
G T
Sbjct: 2427 PRGHFIT 2433
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDR---DQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
A LDRE +R+TL +DR + P + V+ + + L D+ND +P F + A LE
Sbjct: 905 AAQLDRELTSRFTLKIEARDRADKESPKFS-VTTLEIILEDVNDCSPLFIPSVFKARALE 963
Query: 62 NAEIGSL 68
+ +G++
Sbjct: 964 DLPVGTV 970
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K+ LD EK Y L VQ D C + I L +TD+NDN P F +A++
Sbjct: 3112 EVKSLVTLDHEKTPSYRLV--VQAMDGGGQWCSAEIQLVVTDVNDNPPIFTMPQYTANVY 3169
Query: 61 EN 62
EN
Sbjct: 3170 EN 3171
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN-SASILENAEIG 66
+DREK Y LN + D P L+++ + D NDNAP+F +I EN IG
Sbjct: 804 MDREKRDHYLLNITIYDLGIPQKMAWRLLSIHIEDANDNAPQFLQEDGYKITIPENMAIG 863
Query: 67 S 67
+
Sbjct: 864 T 864
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDREK Y +N D + + + +T+ D NDN+P+ V+ +ASI E+ + S
Sbjct: 3018 LDREKRNFYLINITATD---GLFVSQTKVEVTVMDANDNSPDCDQVMYTASIPEDLPVHS 3074
Query: 68 L----STVNATIGVN 78
L +A +GVN
Sbjct: 3075 LLLTVGATDADVGVN 3089
>gi|431892562|gb|ELK02995.1| Protocadherin beta-2 [Pteropus alecto]
Length = 677
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE + Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 381 LVTNRALDRETRSEYNITITVTDLGTPRLKTEHNITLMVSDVNDNAPAFTQTSYTLFVRE 440
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 441 NNSPALHIGSVSATDRDAGAN 461
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ L D P +L+ + + DINDNAPEFA ++ +
Sbjct: 171 QLVLNKALDREEQPEIMLTLTALDGGTPPRSGTALVRIEVLDINDNAPEFAELLYEVQVP 230
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 231 ENSPIGS 237
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF--ASVINSAS 58
EL + LD E I YTLN D + CV + + D+NDN PE +++IN
Sbjct: 278 ELLLRQKLDFESIQNYTLNIQATDGGGLSGSCVVFV--QVIDLNDNPPELTMSTLIN--E 333
Query: 59 ILENAE 64
I EN E
Sbjct: 334 IPENLE 339
>gi|66773212|ref|NP_001019372.1| protocadherin 2 gamma 29 precursor [Danio rerio]
gi|51557458|gb|AAU06415.1| protocadherin cluster 2 gamma 29 [Danio rerio]
gi|190336893|gb|AAI62335.1| Protocadherin 2 gamma 29 [Danio rerio]
gi|190339426|gb|AAI62338.1| Protocadherin 2 gamma 29 [Danio rerio]
Length = 955
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDREKI+ Y + D P++ +TL ++D+NDNAP F +A I+E
Sbjct: 413 LITDQLLDREKISEYNITVTATDEGSPSFSTNKTLTLKISDVNDNAPVFERQSYTAFIME 472
Query: 62 NAEIG 66
N G
Sbjct: 473 NNSPG 477
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LDRE + L D P I +T+ D NDNAP F+ + S+
Sbjct: 202 EMVLQAPLDRETQHEHKLTLTAFDGGNPQRTGTVRICVTVIDANDNAPVFSLPVYRVSLF 261
Query: 61 ENAEIGSL 68
ENA G++
Sbjct: 262 ENAPNGAV 269
>gi|410913701|ref|XP_003970327.1| PREDICTED: protocadherin alpha-C2-like [Takifugu rubripes]
Length = 806
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK+ Y + V DR P +TL L DINDN P F + +
Sbjct: 408 ELVVSEPLDREKVPEYDITFTVTDRGSPPLSDNETMTLELLDINDNVPHFPQSFYTIRVT 467
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 468 ENNAPGAL 475
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE A + L D P + I + + D+NDNAP F ++
Sbjct: 195 DLILTKALDRELQAVHNLILTAVDGGVPTRTGTASIVVRVLDVNDNAPSFGKDKYVVDVM 254
Query: 61 ENAEIGSLS-TVNAT 74
EN+ IGSL +NAT
Sbjct: 255 ENSPIGSLVIKLNAT 269
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDREKIPVYNLVARATDGG--GRFCQSDIRLILEDVNDNPPIFSSDHYNACVY 3141
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +G+NR
Sbjct: 3142 ENTATKALLTRVQATDPDLGINR 3164
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L +D PA V+ + + LTD+NDNAP+F + SA I E+A IG
Sbjct: 3299 LDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIG 3357
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + ++D+NDN P F +A I E
Sbjct: 3398 IKVKKKLDRERVSGYSLLIQATDSGIPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE+ Y LN + D +P L+T+ + D NDN P F S +IL
Sbjct: 782 QLKVLMPMDREQTDLYLLNITIYDLGRPQKSSWRLLTINVEDANDNRPIFLQESYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +DR + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDCSPTFIPTSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 1518 LYIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + + TL D P L+ + +TD+NDN P F +I + + E A
Sbjct: 2348 TARMLDHESVQQSTLKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P E + + + +TD+NDN P F + +
Sbjct: 1833 IRTIASLDHETIAHFHFHVHVRDSGNPQLTAESPAEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDREKI Y L A D C S I L L D+NDN P F+S +A +
Sbjct: 3084 ELKTLALLDREKIPVYNLVARATDGG--GRFCQSDIRLILEDVNDNPPIFSSDHYNACVY 3141
Query: 61 ENAEIGSLST-VNAT---IGVNR 79
EN +L T V AT +G+NR
Sbjct: 3142 ENTATKALLTRVQATDPDLGINR 3164
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E + L +D PA V+ + + LTD+NDNAP+F + SA I E+A IG
Sbjct: 3299 LDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIG 3357
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + ++D+NDN P F +A I E
Sbjct: 3398 IKVKKKLDRERVSGYSLLIQATDSGIPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE+ Y LN + D +P L+T+ + D NDN P F S +IL
Sbjct: 782 QLKVLMPMDREQTDLYLLNITIYDLGRPQKSSWRLLTINVEDANDNRPIFLQESYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSSIGT 848
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +DR + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDRSESGQQQFSVVTLKVFLDDVNDCSPTFIPTSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E ++ LN V+D++ P ++ + + + D ND++P F S + AS+ E
Sbjct: 1518 LYIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + + TL D P L+ + +TD+NDN P F +I + + E A
Sbjct: 2348 TARMLDHESVQQSTLKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P E + + + +TD+NDN P F + +
Sbjct: 1833 IRTIASLDHETIAHFHFHVHVRDSGNPQLTAESPAEVNIEVTDVNDNPPVFTQAVFETVL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
>gi|194219789|ref|XP_001917793.1| PREDICTED: protocadherin gamma-B7-like [Equus caballus]
Length = 836
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P + ITL +TD+NDNAP F +
Sbjct: 403 KLVTDGALDREQTPEYNVTITATDRGKPPLSSSTTITLHVTDVNDNAPVFRQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDL 89
EN A I +S + +G N R ++ DL
Sbjct: 463 ENNPPGASIAQVSASDPDLGPNGRVSYSIVASDL 496
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+ +DR + +C +I + D NDN PE S ILE++
Sbjct: 303 THQPLDFEEVERYTMGVEAKDRGSLSTQCKVII--EVLDENDNLPEIIITSLSDQILEDS 360
Query: 64 EIG 66
G
Sbjct: 361 RPG 363
>gi|441596417|ref|XP_004092933.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-7 [Nomascus
leucogenys]
Length = 795
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I ++L D P +L+ + + DINDNAP+F + +
Sbjct: 193 ELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDINDNAPDFVRSLYKVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GS+
Sbjct: 253 ENSPVGSM 260
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + LDRE+ Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVAEKPLDRERNTEYHITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
>gi|426350407|ref|XP_004042766.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-7 [Gorilla
gorilla gorilla]
Length = 683
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I ++L D P +L+ + + DINDNAP+F + +
Sbjct: 193 ELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTTLVRILVLDINDNAPDFVRSLYKVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GS+
Sbjct: 253 ENSPVGSM 260
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
L T + LDRE+ Y + V D P + IT+ ++D+NDNAP F
Sbjct: 403 LVTEKPLDRERNTEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAF 451
>gi|57528959|ref|NP_001009596.1| protocadherin 2 alpha b 9 precursor [Danio rerio]
gi|53748796|dbj|BAD52313.1| cadherin-related neuronal receptor variable 9 [Danio rerio]
gi|53748818|dbj|BAD52326.1| cadherin-related neuronal receptor variable 9 [Danio rerio]
gi|190338394|gb|AAI63425.1| Protocadherin 2 alpha b 9 [Danio rerio]
gi|190339866|gb|AAI63430.1| Pcdh2ab9 protein [Danio rerio]
Length = 940
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y + D P S+I + ++D+NDNAP F + + + EN++IG+
Sbjct: 411 LDRETASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFPEPVINVYVKENSQIGA 470
Query: 68 -LSTVNA 73
L TV+A
Sbjct: 471 VLHTVSA 477
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK L D +P I + + D+NDN P F+ + ++
Sbjct: 191 ELVLQKALDREKQPVIKLTLTAVDGGKPPRSGTINIIVNIEDVNDNIPVFSKPLFKTRVV 250
Query: 61 ENAEIGS 67
EN+ G+
Sbjct: 251 ENSPFGT 257
>gi|348582930|ref|XP_003477229.1| PREDICTED: protocadherin gamma-B6-like [Cavia porcellus]
Length = 823
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P+ + ITL +TD+NDNAP F + +
Sbjct: 405 KLVTDGALDREQDPEYNITITATDRGKPSLSSSTYITLHITDVNDNAPAFQQASYTVHVA 464
Query: 61 ENAEIG-SLSTVNAT 74
EN G S++ V A+
Sbjct: 465 ENNPPGASIAQVRAS 479
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LD E + RYT+ +D + +C +I + D NDN+P+ S ILE
Sbjct: 303 LKNNQSLDFEDVERYTMEVEAKDGGGLSTQCKVIIEIL--DENDNSPQIVITSLSDQILE 360
Query: 62 NAEIG 66
++ G
Sbjct: 361 DSPPG 365
>gi|327283350|ref|XP_003226404.1| PREDICTED: protocadherin-11 X-linked-like, partial [Anolis
carolinensis]
Length = 1038
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE+ Y + V+D PA +++ +T+TD+NDN P F S+ ENA +G
Sbjct: 207 LDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKDNDIEVSVPENAPVGT 266
Query: 67 SLSTVNAT 74
S+S ++AT
Sbjct: 267 SVSQLHAT 274
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDREK RY+ +D P + + +T+++ D NDN+P F + + E
Sbjct: 522 LTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPE 581
Query: 62 N----AEIGSLSTVNATIGVN 78
N +G ++ +A G N
Sbjct: 582 NLPMYGTVGLITVTDADSGEN 602
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+TA LD E Y + D +P +++ + + D NDNAP F I SI E
Sbjct: 418 LETATFLDYETTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPE 477
Query: 62 NAEIGS-LSTVNAT 74
N G+ L+ ++AT
Sbjct: 478 NNAPGTQLTKISAT 491
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 36 ITLTLTDINDNAPEFASVINSASILENAEIGSL----STVNATIGVNRCGH 82
I + DINDNAP F S + + SI EN I S S V+ IGVN H
Sbjct: 125 IRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQH 175
>gi|291387487|ref|XP_002710306.1| PREDICTED: protocadherin beta 2 [Oryctolagus cuniculus]
Length = 819
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ L D P +L+ + + D+NDNAPEFA ++ +
Sbjct: 197 QLVLDKALDREEEPEIRLTLTALDGGTPPRSGTALVRVEVVDVNDNAPEFAQLMYEVQVP 256
Query: 61 ENAEIGS-LSTVNA---TIGVN 78
EN+ IGS ++TV+A IG N
Sbjct: 257 ENSRIGSQVATVSARDSDIGTN 278
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE-- 64
LDRE A Y + V D P + + ++D+NDNAP F+ + + EN
Sbjct: 412 ALDREIRAEYNITITVSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPG 471
Query: 65 --IGSLSTVNATIGVN 78
IGS+S + G N
Sbjct: 472 LLIGSVSASDRDAGAN 487
>gi|167736394|ref|NP_001108073.1| protocadherin beta 4 precursor [Rattus norvegicus]
gi|149017291|gb|EDL76342.1| rCG49534 [Rattus norvegicus]
Length = 779
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 402 LVTERPLDRESRAEYNITITVSDLGTPRLTTQHTITVKVSDINDNAPSFTQTSYTMFVHE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 462 NNSPALHIGTISATDSDSGSN 482
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ TL D P ++ + + + DINDNAP+F + +
Sbjct: 193 ELVLDRALDREEQPELTLILTALDGGAPRRSGMTAVHIEVVDINDNAPQFVQSLYEVQVP 252
Query: 61 ENAEIGSL-STVNAT 74
EN + +L TV+AT
Sbjct: 253 ENIPLDALVVTVSAT 267
>gi|47207230|emb|CAF92015.1| unnamed protein product [Tetraodon nigroviridis]
Length = 753
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LDRE+ +L D QP + I +T+ D+NDNAP F + A++
Sbjct: 177 EMVLQKPLDREREEEISLVLTATDGGQPVLSGTAQIHVTVLDVNDNAPVFTKPVYKATVP 236
Query: 61 ENAEIGSLST 70
ENA IG+L T
Sbjct: 237 ENALIGTLIT 246
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ + Y + D P+ +TL ++D+NDNAP F A I+E
Sbjct: 388 LLTKNELDRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIVE 447
Query: 62 NAEIG-SLSTVNA 73
N G S+ TV A
Sbjct: 448 NNTPGLSIFTVRA 460
>gi|291387508|ref|XP_002710180.1| PREDICTED: protocadherin gamma subfamily A, 6 [Oryctolagus
cuniculus]
Length = 822
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE A + L D P V+ I +T+ D NDNAP F + AS+
Sbjct: 193 ELVLERALDREGEAVHRLVLTATDGGDPVRSGVARILVTVLDANDNAPVFTQSVYRASVP 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +GS + +VNAT
Sbjct: 253 ENLPVGSPVLSVNAT 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T+ LD E ++ Y L+ V+ RD P + + +T+ D+NDNAPE S ++
Sbjct: 300 EISTSANLDYEDVSFYELD--VEARDGPGLRGRAKVAITVLDVNDNAPEVVITSGSRTVA 357
Query: 61 ENAEIGSL 68
E+A +G++
Sbjct: 358 ESAPVGTV 365
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+++ Y + D+ P +LI+L + D NDN P F S + E
Sbjct: 404 LVTNAVLDREQVSLYNITVTATDKGAPPLSTETLISLKVADTNDNPPTFPQSSYSVYLPE 463
Query: 62 NAEIG-SLSTVNA 73
N G S+ +VNA
Sbjct: 464 NNPRGASIFSVNA 476
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1583 EFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1642
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1643 EDAPAGTL 1650
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE A + L D P L+T+++ D+ND AP F S + E
Sbjct: 1378 LSLVRPLDREHRAEHLLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1437
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1438 NSPPGTSLLTLRAT 1451
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2337 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAVSEDTPVGA 2396
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F S S + E
Sbjct: 1480 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPE 1539
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+T+ A+ +G N
Sbjct: 1540 GQDPQTLTTLRASDPDVGAN 1559
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1159 EVTTLQTLDRERQSSYQLLVRVQDGGSPPRSATGTVHIAVLDLNDNSPTFLQASGAA 1215
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 203 ELVITGDLDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 262
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 263 ESLAPGS 269
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ + Y+ + D ++ +T+T+ D+ND+AP F S
Sbjct: 1687 ELRTATALDREQCSSYSFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPS 1739
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDN P F
Sbjct: 424 ARQLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNVPAF 469
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 98 VRTARVLDREQRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 151
Query: 62 NAEIGS 67
+ +G+
Sbjct: 152 HTALGT 157
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+ AR LD E AR+ L D A ++ +T+ + D+ND+ P F + S S+ E
Sbjct: 2436 LRLARPLDCETQARHQLVVQAAD-PVGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAE 2494
Query: 62 NAEIGSLST 70
N G+L T
Sbjct: 2495 NQPPGTLVT 2503
>gi|395817383|ref|XP_003782151.1| PREDICTED: protocadherin gamma-C5 isoform 2 [Otolemur garnettii]
Length = 944
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F + +
Sbjct: 193 ELVLEQPLDREAQARHQLVLTAVDGGTPALSGTTLISVIVLDINDNAPTFQHSVLRVGLP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA +G+ L +NAT
Sbjct: 253 ENAPMGTLLLRLNAT 267
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P +I L ++D+NDNAP F + +A I E
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPPLHKHLIIRLNISDVNDNAPHFTHHLYTAYIPE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV+A+
Sbjct: 466 NRPPGSLLCTVSAS 479
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D NDNAPE AS++N +LE+ +
Sbjct: 308 VDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>gi|348558978|ref|XP_003465293.1| PREDICTED: protocadherin-16-like [Cavia porcellus]
Length = 3297
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1805 EFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1864
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1865 EDAPAGTL 1872
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F S + E
Sbjct: 1600 LSVVRPLDREQRAEHVLTVVASDHGSPPRSSTQLLTVSIVDVNDEAPTFQQQEYSVLLRE 1659
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1660 NSPPGTSLLTLRAT 1673
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2559 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGA 2618
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL A LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 205 ELVIAGELDRENRSHYMLQLEAYDGGLPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 264
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 265 ESLAPGS 271
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 426 ARQLDREERDAYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPTF 471
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + + L VQD P + + + D+NDN+P F +A
Sbjct: 1161 EVTTLQTLDREQQSSFQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1217
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F + S + E
Sbjct: 1702 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPAFGNAQLSLEVPE 1761
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+ + A+ +G N
Sbjct: 1762 GQDPQTLTILRASDPDVGAN 1781
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 100 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 153
Query: 62 NAEIGS 67
+ +G+
Sbjct: 154 HTALGT 159
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L+ A+ LD E R+ L D PA +L +T+ + D+ND+ P F I S S+
Sbjct: 2658 LRLAQSLDCETQTRHQLVVQAAD---PAGTHFALAPVTVEVQDVNDHGPAFPLNILSTSL 2714
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2715 AENQPPGTLVT 2725
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE + Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1909 ELRTATALDREHCSSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPT 1961
>gi|348514373|ref|XP_003444715.1| PREDICTED: protocadherin gamma-A7-like [Oreochromis niloticus]
Length = 680
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ GLDREK +++ L D +P I +++ D NDN+P F I AS+L
Sbjct: 192 EMVLQSGLDREKQSKHALILTAVDGGEPQMSGTVKIHISVLDANDNSPVFTQSIYKASVL 251
Query: 61 ENAE----IGSLSTVNATIGVN 78
ENA I ++S V+A G N
Sbjct: 252 ENALRGTIIATVSAVDADQGYN 273
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA+ LDREK+ Y + D P + L ++DINDNAP F+ SA + E
Sbjct: 403 LITAQTLDREKLPTYNITLTATDEGFPVLSNKKSVYLEVSDINDNAPAFSQSHYSAQVTE 462
Query: 62 NAEIG 66
N G
Sbjct: 463 NNSPG 467
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1803 EFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1862
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1863 EDAPAGTL 1870
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F S + E
Sbjct: 1598 LSVVRSLDREQRAEHLLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRE 1657
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1658 NSPPGTSLLTLRAT 1671
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2557 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGA 2616
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1159 EMTTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQASGAA 1215
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ L + +DR P + + + D ND+AP F S S + E
Sbjct: 1700 LTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPE 1759
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+ + A+ +G N
Sbjct: 1760 GQDPQTLTVLRASDPDVGAN 1779
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 203 ELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 262
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 263 ESLAPGS 269
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 424 ARQLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTF 469
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L+ AR LD E AR+ L D PA +L +T+ + D+ND+ P F + S S+
Sbjct: 2656 LRLARPLDCETQARHQLVVQAAD---PAGAHFALAPVTIEVQDVNDHGPVFPLSLLSTSL 2712
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2713 AENQPPGTLVT 2723
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 98 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARAALQIPE 151
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 152 HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFR 189
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFAS 52
EL+TA LDRE+ + Y + D ++ +T+T+ D+ND+AP F +
Sbjct: 1907 ELRTAIALDREQCSSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPT 1959
>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
Length = 3295
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E T R LDRE + L +D QPA L+T+T+ D ND+AP F S +
Sbjct: 1803 EFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVP 1862
Query: 61 ENAEIGSL 68
E+A G+L
Sbjct: 1863 EDAPAGTL 1870
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L R LDRE+ A + L D P L+T+++ D+ND AP F + + E
Sbjct: 1598 LSVVRPLDREQRAEHVLTVVASDHGSPPRSATQLLTISVADVNDEAPAFPQQEYTVLLRE 1657
Query: 62 NAEIG-SLSTVNAT 74
N+ G SL T+ AT
Sbjct: 1658 NSPPGTSLLTLRAT 1671
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + +Y L DR QP +T+T+ D+NDN P F ++ E+ +G+
Sbjct: 2557 LDFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDTPVGA 2616
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA 57
E+ T + LDRE+ + Y L VQD P + + + D+NDN+P F +A
Sbjct: 1159 EVTTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAA 1215
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL LDRE + Y L D P +L+ +TL DIND+AP F A +
Sbjct: 203 ELVITGELDRENHSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVS 262
Query: 61 ENAEIGS 67
E+ GS
Sbjct: 263 ESLAPGS 269
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE+ Y L D P + L +TD+NDNAP F
Sbjct: 424 ARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPVF 469
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TAR LDRE+ RY A D +T+ + DIND+AP F + I E
Sbjct: 98 VRTARVLDRERRDRYRFTAVTPD------GATVEVTVRVADINDHAPAFPQARATLQIPE 151
Query: 62 --------------NAEIGSLSTVNATIGVNRCGHTFR 85
+A+ G L T + + G TFR
Sbjct: 152 HTAFGTRYPLEPARDADAGHLGTQGYALSGDGAGETFR 189
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ +L + +D P + +T+ D ND+AP F + S + E
Sbjct: 1700 LTTLRALDREEQEEISLTVYARDMGSPPLLTHVTVRVTVEDENDHAPTFGNSHLSLEVPE 1759
Query: 62 NAEIGSLSTVNAT---IGVN 78
+ +L+ + A+ +G N
Sbjct: 1760 GQDPQTLTVLRASDPDVGAN 1779
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASI 59
L+ A LD E AR+ L D PA +L +T+ + D+ND+ P F + S S+
Sbjct: 2656 LRLAHPLDCETQARHQLVVQATD---PAGAHFALAPVTVEVQDVNDHGPAFPLNLLSTSL 2712
Query: 60 LENAEIGSLST 70
EN G+L T
Sbjct: 2713 AENQPAGTLVT 2723
>gi|326936441|ref|XP_003214262.1| PREDICTED: putative protocadherin beta-18-like, partial [Meleagris
gallopavo]
Length = 463
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDREK ARY++ D P T+ ++D+NDNAP F + +
Sbjct: 49 ELVTVSALDREKTARYSVIVTAADAGSPRLSSSHTFTVDISDVNDNAPVFNQTSYTMYVH 108
Query: 61 ENAE----IGSLSTVNATIGVN 78
EN +G++ +A G N
Sbjct: 109 ENNVPALLVGAVKATDADAGAN 130
>gi|301753539|ref|XP_002912598.1| PREDICTED: protocadherin beta-16-like [Ailuropoda melanoleuca]
Length = 799
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P S + + + DINDNAPEFA ++ I
Sbjct: 195 ELVLEKVLDREEQSELRLTLTALDGGSPPRTGTSQVVIVVLDINDNAPEFAQLLYKVQIP 254
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 255 ENSPIGS 261
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + +++T++D+NDNAP F+ + + E
Sbjct: 405 LVTEGALDRETQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 464
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 465 NNSPALHIGSVSATDRDAGAN 485
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C I + + D+NDN PE + ++ +
Sbjct: 302 EIRLKKLLDFEEIQSYHMEIEASDGGGLSGKCT--IVIEVMDVNDNTPELTMSVFTSDVP 359
Query: 61 ENAEIGSLSTVNATIGVN 78
EN TV A G++
Sbjct: 360 ENTP----DTVVAIFGIS 373
>gi|301624872|ref|XP_002941722.1| PREDICTED: protocadherin Fat 2-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1196
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ A Y LNA V D P ++ + L D NDNAP F S+ +I
Sbjct: 823 KLMVSSPLDRERTASYILNATVYDLGVPQKSSWKILAVNLLDANDNAPIFPSLGYCVAIP 882
Query: 61 ENAEIGS 67
E+++IG+
Sbjct: 883 EDSKIGT 889
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE ++ Y L + D V+ + + +TDINDN P+ + + AS+ E
Sbjct: 1094 LRTEAPLDRESVSHYWLTVYATDLGSIPLTSVAEVYIEVTDINDNMPQLSQAVFYASVTE 1153
Query: 62 NA 63
N+
Sbjct: 1154 NS 1155
>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
rerio]
gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
Length = 2941
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASI 59
+L LD E YTL QD +P +S L+T+ + DINDNAP F S A++
Sbjct: 515 KLDLVSQLDYEMNKEYTLRIRAQDGGRPPLSNISGLVTVQVLDINDNAPIFVSTPFQATV 574
Query: 60 LENAEIG----SLSTVNATIGVN 78
LEN +G + V+A G N
Sbjct: 575 LENVPVGYSVIHIQAVDADAGDN 597
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE A Y L A D+ PA + + +T+ D+NDN P F + E
Sbjct: 933 VRTLRRLDRENTAIYNLQAFAVDKGVPALKTAVDMQVTILDVNDNPPVFEKDEFDIFVEE 992
Query: 62 NAEIG 66
N+ IG
Sbjct: 993 NSPIG 997
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE + D P ++ +T+T++D ND+ P F SI E
Sbjct: 303 VSTVEILDRETKDTHVFRVTAVDHGTPRRTAMATLTVTVSDTNDHDPAFEQQDYKESIRE 362
Query: 62 NAEIG-SLSTVNATIG 76
N EIG + TV AT G
Sbjct: 363 NLEIGYEVLTVRATDG 378
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A LDRE + Y +D PA + I++T+ D+NDN PEF + E+A
Sbjct: 625 AAELDRETVDFYNFGVEARDHGAPAMSSSASISMTILDVNDNNPEFTQKAYYMRLNEDAA 684
Query: 65 IG-SLSTVNA 73
+G S+ TV+A
Sbjct: 685 VGTSVVTVSA 694
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,332,414,427
Number of Sequences: 23463169
Number of extensions: 41351296
Number of successful extensions: 144107
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 1130
Number of HSP's that attempted gapping in prelim test: 101983
Number of HSP's gapped (non-prelim): 41783
length of query: 96
length of database: 8,064,228,071
effective HSP length: 65
effective length of query: 31
effective length of database: 6,539,122,086
effective search space: 202712784666
effective search space used: 202712784666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)