BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10256
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK A LDRE +Y L AHVQD EC S I +T+ DINDN P F+ S+ E
Sbjct: 3137 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPE 3196
Query: 62 NAEIGSLST----VNATIGVNR 79
+A++ +L T ++ GVNR
Sbjct: 3197 DAQLNTLITKVHAMDKDFGVNR 3218
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ + LDRE I+ + L +D P ++ + + + DINDN PEF+ S ILE
Sbjct: 3241 IRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 3300
Query: 62 NAEIGS-LSTVNAT---IGVNRCGHTF 84
NA G+ + V AT IGVN H F
Sbjct: 3301 NATHGTEVCKVYATSIDIGVNADIHYF 3327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T R LDRE A + L + D P S I +++ DINDN+PEF +
Sbjct: 1250 TERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRV------YKV 1303
Query: 64 EIGSLSTVNATI 75
++ S +TVN +I
Sbjct: 1304 QVPSSATVNQSI 1315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ LDRE+ Y LN V D P ++ +T+ D+NDN P + + +
Sbjct: 825 ELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT 884
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+A IG+ L +A G+N
Sbjct: 885 ESARIGTVVHCLHATDADSGIN 906
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASIL 60
+ +R LDRE I+ YTL D+ P C S+ I + + D NDNAP F+S S +
Sbjct: 3451 ISVSRPLDRETISHYTLEIQACDQGDP-QRCNSVPININILDTNDNAPIFSSSNYSVVLQ 3509
Query: 61 ENAEIG 66
EN +G
Sbjct: 3510 ENRLLG 3515
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y D P + +T+ + D NDNAP F I S+ ENA G+
Sbjct: 2941 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGT 3000
Query: 68 L 68
+
Sbjct: 3001 V 3001
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK A++ L V+D+ P + I + + D ND+ PEF + I + + E+A IGS
Sbjct: 1567 LDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS 1626
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L+ + LDREK Y L+ +D P +L+ + + D+NDNAP F
Sbjct: 929 LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFG 978
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L + P + + + + + D NDN P+F + SAS+
Sbjct: 2827 ELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVA 2886
Query: 61 ENAE-IGSLSTVNAT 74
EN+E + SL V+AT
Sbjct: 2887 ENSEKVISLVKVSAT 2901
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 2 LKTARGLDREKIARYTL------NAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVIN 55
L TA+ LD EK + YTL A+V R Q + + + +++ D+NDN P F +V
Sbjct: 454 LYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAK----VKISVQDMNDNDPIFENVNK 509
Query: 56 SASILENAEIGSL 68
SI EN GS
Sbjct: 510 VISINENNLAGSF 522
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EKI+ + ++ D + V ++++++ D+ND PE S I + +I ENA G+
Sbjct: 2297 LDYEKISSHDVSIRATDSLSGVYAEV-VLSVSIMDVNDCYPEIESDIYNLTIPENASFGT 2355
Query: 68 -LSTVNAT 74
+ +NAT
Sbjct: 2356 QILKINAT 2363
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
++ LD E Y L V D + + + + + DINDN P+FA + +I EN E
Sbjct: 1461 SKYLDYETQQSYNLTISVTDG---TFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIE 1517
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y L D P + + +++ DINDN+P F + ++ E+ +GS
Sbjct: 3352 LDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGS 3411
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+KT LD E + R Y L D P + +++ + DINDN P+F V +
Sbjct: 560 VKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCYGKV 619
Query: 60 LENAEIGSLSTVNATIGVNRCGHTFRGKDLRCYNL 94
++A +G+ V + I F D+ Y L
Sbjct: 620 TKSAPMGTEVFVTSAID-------FDAGDIISYRL 647
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT+ LDRE+ A Y L V+ D C + I LTL D+NDNAPEF++ + ++
Sbjct: 3078 ELKTSTPLDREEQAVYHL--LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVF 3135
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN E G+L T +A G+NR
Sbjct: 3136 ENTEPGTLLTRVQATDADAGLNR 3158
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+K + LDRE I+ YTL D P + + + ++D+NDNAP F+ S I
Sbjct: 3391 EVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQ 3450
Query: 61 ENAEIG 66
EN +G
Sbjct: 3451 ENKPVG 3456
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T+ LD E + ++TL V+D+D P + I + ++D ND+AP F + + E
Sbjct: 1514 LYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1574 SAAVGSV 1580
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE +YTLN V D P L+ + + D NDN PEF + E
Sbjct: 774 LKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSE 833
Query: 62 NAEIGS 67
+ E+ S
Sbjct: 834 DKEVHS 839
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E+ ++T+ D P ++T+ +TD+NDN P F I A I E+A
Sbjct: 2346 RTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPH 2405
Query: 66 GSLST 70
G T
Sbjct: 2406 GHFVT 2410
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+KTA+ LDR A Y L D+ P ++ + + +T ++ +P+F S S + E
Sbjct: 1619 IKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSE 1678
Query: 62 NAEIGSL 68
IGS
Sbjct: 1679 TVSIGSF 1685
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA-----SVINSASILEN 62
LD E Y L D P+ V+ + + +TDINDN P F+ +VI+ ++LE
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 63 AEI 65
+ I
Sbjct: 3353 SVI 3355
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ + L V D P ++ + + + D NDN P+F
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQF 1245
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T+ LDRE + Y L D+ I + + D+NDNAP+ + + I+E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 62 NA 63
N+
Sbjct: 1151 NS 1152
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 5 ARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEF 50
AR LDRE ++L +D R++P ++ ++L D+NDN P F
Sbjct: 880 ARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTF 927
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD EK Y + D ++ +++ +T+TD+ND+ P F + I ++
Sbjct: 2869 ITTLKELDHEKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928
Query: 61 ENAEIGS----LSTVNA 73
E+ G LST +A
Sbjct: 2929 EDDPQGGVIAILSTTDA 2945
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T+ LD E + R YTL D P E L T+TL ++NDN P F + +I
Sbjct: 519 VSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNNLNDNTPLFEKINCEGTI 578
Query: 60 LENAEIG-SLSTVNA 73
+ +G ++TV+A
Sbjct: 579 PRDLGVGEQITTVSA 593
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE A ++ + +D + + LTD NDNAP+F + +I
Sbjct: 2547 QIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIG 2606
Query: 61 ENAEIGS 67
+A G+
Sbjct: 2607 SSAAKGT 2613
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAW--ECVSLITLTLTDINDNAPEFASVINSASI 59
+ T LD E+ + + V D P E + +T+ + DIND P FA + AS+
Sbjct: 1829 IHTVLSLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLYEASL 1888
Query: 60 LENAEIG-SLSTVNAT 74
L G + TVNAT
Sbjct: 1889 LLPTYKGVKVITVNAT 1904
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA-WECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LDRE A YTL+ D+ P + +++ DINDN P F A++
Sbjct: 3181 IQLEKPLDRELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVS 3240
Query: 61 ENAEIGS 67
E+ +G+
Sbjct: 3241 EDILVGT 3247
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E + YTL +Q + + + + L D NDNAP F + I E+A
Sbjct: 1721 TQKALDFETLPIYTLI--IQGTNMAGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESA 1778
Query: 64 EIGSL 68
I S+
Sbjct: 1779 SINSV 1783
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 2 LKTARGLDRE--KIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
LK + LD E K ++++ A D V +++ + D NDN+P F S A I
Sbjct: 2760 LKLEKSLDHETTKWYQFSILARCTQDDHEMVASVD-VSIQVKDANDNSPVFESSPYEAFI 2818
Query: 60 LENAEIGS 67
+EN GS
Sbjct: 2819 VENLPGGS 2826
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP---AWECVSLITLTLTDINDNAPEFASVINSAS 58
++ + LD EK Y L +D+ +P + C + + + N + P F+S + +
Sbjct: 983 VRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGT 1042
Query: 59 ILENAEIGSL-STVNA 73
+ E+A +GSL TV+A
Sbjct: 1043 VKEDAPVGSLVMTVSA 1058
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILEN 62
+AR LDRE+ +RYTL DR QP + + IT+ + D NDNAP F + S+ E+
Sbjct: 1852 SARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQED 1911
Query: 63 AEIGS----LSTVNATIGVN 78
A +G+ +S V+A +GVN
Sbjct: 1912 APLGTSVVQISAVDADLGVN 1931
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE ++ YTL+ D+ P I L +TD+NDN PEF + A+++E A+ G+
Sbjct: 409 LDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGT 468
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++ A+ LD E ++ LN + P + + + + D+NDNAPEF + + S+ E
Sbjct: 831 IRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQ-VNIEVEDVNDNAPEFEASMVRISVPE 889
Query: 62 NAEIGS 67
+AE+G+
Sbjct: 890 SAELGA 895
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ + LDRE Y+L D P + +T+ D+NDN P F A++
Sbjct: 184 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 243
Query: 61 ENAEIGS 67
ENA +G+
Sbjct: 244 ENATVGT 250
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LD E+ + Y L D P E V ++ + + D+NDN P F S + E
Sbjct: 1264 IRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVRE 1323
Query: 62 NAE----IGSLSTVNATIGVNRCGHTFRGKDLR 90
+A +GS+S + V R +DLR
Sbjct: 1324 DAALGHVVGSISPIERPADVVRNSVEESFEDLR 1356
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE RY L D PA + + + + D NDN P+F I EN GS
Sbjct: 1058 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGS 1117
Query: 68 LSTV 71
+ V
Sbjct: 1118 VVGV 1121
Score = 35.8 bits (81), Expect = 0.077, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
E+ T LDRE Y L +D+ P + + ++D+NDNAPE A
Sbjct: 1154 EISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIA 1204
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
Query: 4 TARG-LDREKIARYTLNAHVQD------------RDQPAWEC-----------VSLITLT 39
T RG DRE A Y L +V+D R Q + + V+ I +T
Sbjct: 1724 TTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYIT 1783
Query: 40 LTDINDNAPEF-ASVINSASILENAEIGSLSTVNAT 74
+ D+NDN+PEF S+ EN+E G + TV A+
Sbjct: 1784 VGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVAS 1819
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 9 DREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENAEIGS 67
D EK R+ L +D QP + SL + L + ++N P F + A+ILEN GS
Sbjct: 1624 DVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGS 1683
Query: 68 L 68
Sbjct: 1684 F 1684
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE Y L D P + I + + D+NDN P F N ++ E E+G+
Sbjct: 2333 LDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPN-NLVTVSEATELGA 2391
Query: 68 LST 70
+ T
Sbjct: 2392 VIT 2394
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 18 LNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG----SLSTVNA 73
L +D P + + +T+ D+NDN P F + S+ EN +G +S +
Sbjct: 526 LTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP 585
Query: 74 TIGVN 78
GVN
Sbjct: 586 DCGVN 590
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ A LD E+ + Y DR ++I + LTD+NDN P F S+
Sbjct: 615 EICIAGELDFERRSSYEFPVLATDRG--GLSTTAMIKMQLTDVNDNRPVFYPREYKVSLR 672
Query: 61 ENAEIGSLSTVNATIGV 77
E+ + S ++ + V
Sbjct: 673 ESPKASSQASSTPIVAV 689
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQD---RDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
L AR LDRE + + L D + P ++ + + + D+NDNAPE+
Sbjct: 1382 LVVARLLDREVQSEFRLEIRALDTTASNNPQSSAIT-VKIEVADVNDNAPEWPQDPIDLQ 1440
Query: 59 ILENAEIGSL----STVNATIGVN 78
+ E +G++ + +A G N
Sbjct: 1441 VSEATPVGTIIHNFTATDADTGTN 1464
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
++ LD E R+TL D P+ I + + D+NDN P F S ++ E+
Sbjct: 938 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 997
Query: 65 IGS-LSTVNAT 74
I + + VNA+
Sbjct: 998 INAQIIQVNAS 1008
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE----FASVINSASILE 61
+ LD E + L +D + E + +++ +TD+NDN P F S S I E
Sbjct: 296 KALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISE 355
Query: 62 NAEIGSL 68
+A+ G
Sbjct: 356 SAQPGEF 362
>sp|P33145|CADHK_CHICK B-cadherin (Fragment) OS=Gallus gallus GN=K-CAM PE=2 SV=1
Length = 732
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA- 63
A GLDRE++ YTL D D +L + +TD+NDNAPEF A++ EN
Sbjct: 182 ASGLDRERVREYTLTMQAADLDGQGLTTTALAVIEITDVNDNAPEFDPKTYEAAVPENEA 241
Query: 64 --EIGSLSTVN 72
E+ L+T +
Sbjct: 242 ELEVARLATTD 252
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+K + LDRE I +Y L +H V + +P E + +I +T+TD NDN P+F + S+
Sbjct: 66 MKVTQPLDREHINKYHLYSHAVSENGKPVEEPMEII-VTVTDQNDNKPQFTQEVFRGSVP 124
Query: 61 ENAEIG-SLSTVNAT 74
E A G S+ VNAT
Sbjct: 125 EGALPGTSVMRVNAT 139
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREKI+ Y L D+ P+ + +++ D NDNAP F+ + SA +
Sbjct: 2726 EIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIF-SAYVS 2784
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2785 ENSPLGYTVTRVTTSDEDIGIN 2806
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+ A Y L+ D P + + ++L DINDN+P F V A I E
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYVTTVSAT 714
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+++ Y+L D+ QP + + + + DINDN P FA + I EN G+
Sbjct: 2112 LDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGT 2171
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ DINDNAP F + IL
Sbjct: 2622 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEIL 2681
Query: 61 ENAEIGSLSTVNAT 74
EN + TV+AT
Sbjct: 2682 ENLSPRKILTVSAT 2695
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ + LDRE + L D PA I + + DINDN P FA+ + SI
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIA 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDARTGT 2381
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ GLDRE + Y L D P+ + + +TL DINDN P ++ +L
Sbjct: 3463 QITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL--TVSEGEVL 3520
Query: 61 ENAEIGSL 68
EN G+L
Sbjct: 3521 ENKRPGTL 3528
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDINDNAPEFAS 52
LKT + LDRE + Y L V D QP + + +++ L D+NDN P F S
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLS 2053
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD--QPAWEC-----VSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P E V+ + + + DIND+ P F +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E GS +S V+AT G
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDG 502
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
+G+
Sbjct: 1435 LGT 1437
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDN P F+
Sbjct: 2828 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNTPRFSRPSYYLDCP 2884
Query: 61 ENAEIGS-LSTVNAT 74
E E+GS ++ V+AT
Sbjct: 2885 ELPELGSRVTQVSAT 2899
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ S + E
Sbjct: 745 ISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 62 NAEIG-SLSTVNAT 74
N +G + +V+AT
Sbjct: 805 NVALGYHVGSVSAT 818
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDRE YTL DR + +TL D+ND P F S ++ E
Sbjct: 2211 ITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE ++Y+L D Q I +T++D+ND+ P F+ + S I
Sbjct: 1795 DLIATKRLDREHRSKYSLLVRADDGLQ---SSDMRINITISDVNDHTPRFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTTPGSL 1859
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L A +++ +T+ D+NDNAP F + S + +
Sbjct: 847 QLTTASVIDREEQSFYQLKIVASGG---AVTGDTVVNITVKDLNDNAPHFLQAVESINAV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEFASVIN-SASILE 61
A GLDRE ++ LN + RDQ VS L +T D+ND P F+ S++E
Sbjct: 537 AGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVE 594
Query: 62 NAEIGS 67
NA G+
Sbjct: 595 NAPTGT 600
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3568 LSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSRTV 3619
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E + Y+L D +++ + D NDN P F +LEN IG
Sbjct: 1273 LDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGE 1332
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1333 LVSSVTAT 1340
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE RY L DR +T+ L D+NDN P F S N E +
Sbjct: 1058 LDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNST-NYTFYFEEEQRAG 1116
Query: 65 --IGSLSTVNATIGVN 78
+G +S V+ G N
Sbjct: 1117 SFVGKVSAVDKDFGPN 1132
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E +++ + D A +T+++ D+NDN+P F +++ENA
Sbjct: 3151 AKALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAP 3210
Query: 65 IGS----LSTVNATIGVN 78
G+ L+ +A G N
Sbjct: 3211 SGTTVIHLNATDADSGAN 3228
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
R LD E Y L +D + + + D+NDN P F+ S S++EN +
Sbjct: 1902 RALDYETQQYYILTVRAEDGGGQSTTIRAY--FNILDVNDNPPVFSMSSYSTSLMENLPL 1959
Query: 66 GS----LSTVNATIGVN 78
GS + +A GVN
Sbjct: 1960 GSTVLVFNVTDADDGVN 1976
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 1 ELKTARGLDREKIAR------YTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASV 53
E+ + DRE + R ++ DR P + + + + + DINDNAP+F
Sbjct: 1154 EITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKDQATVHVYMKDINDNAPKFLKD 1213
Query: 54 INSASILENA 63
A++ E A
Sbjct: 1214 FYQATVSETA 1223
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ + G I R++ DR P+ + +T+ D NDN P+F +
Sbjct: 2936 KYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVT 2995
Query: 61 ENAEIGS 67
+N ++G+
Sbjct: 2996 KNVKVGT 3002
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 16 YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
+ + +D+ P +++ +T+T+ N + PEF+ SA+I E+ IGS+
Sbjct: 3057 FLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSV 3109
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWE---CVSLITLTLTDINDNAPEFASVINSAS 58
+ T+ +DRE + L D+ P + +T+ +TD+NDN P F S N+ +
Sbjct: 1478 IYTSAEIDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQ-NALA 1536
Query: 59 ILENAEIGSLST 70
+A IGS+ T
Sbjct: 1537 ADPSAMIGSVLT 1548
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL+ A+ LDRE+ + Y+L D QP + I + + D+NDN P F + S ++
Sbjct: 3377 ELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTVQ 3436
Query: 61 ENAEIGS 67
EN+ IGS
Sbjct: 3437 ENSPIGS 3443
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A LD E Y LN V D P L+T+ + D NDNAP F +I E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 62 NAEIGS 67
+ E+G+
Sbjct: 832 DTEVGT 837
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E + + D+ P +L+ + ++DINDN PEF A++
Sbjct: 2330 EMSTVQELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVS 2389
Query: 61 ENAEIGSL 68
E A G L
Sbjct: 2390 ELATCGHL 2397
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E Y + D Q +L+ +++TD NDNAP FAS S++
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVV 2916
Query: 61 ENAEIG----SLSTVNATI 75
EN+E G +L T++A I
Sbjct: 2917 ENSEPGELVATLKTLDADI 2935
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T LDRE + Y L DR V+ + + +TD NDN P+ + + SI E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 62 NAEIGS 67
+A +G+
Sbjct: 1149 DAPVGT 1154
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L TA+ LDRE + L V D +P+ + S + + + D+NDN P F+
Sbjct: 1194 LSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFS 1243
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPA----WECVSLITLTLTDINDNAPEFASVINS 56
EL LDRE RY L V+ RDQP+ V+ + +TL D+NDN+P+ + N
Sbjct: 874 ELVVTGHLDRESEPRYILK--VEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNR 931
Query: 57 ASILENAEIGSLST 70
+ E+ G++ T
Sbjct: 932 LKVPEDLPPGTVLT 945
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T LDRE+ + L A D C + ITL + D+NDNAP F + ++
Sbjct: 3066 ELTTLTALDRERKDVFNLVAKATDGG--GRSCQADITLHVEDVNDNAPRFFPSHCAVAVF 3123
Query: 61 ENAEI 65
+N +
Sbjct: 3124 DNTTV 3128
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E +Y L+ + + V+ + + +TD+N++ P+F S +LENA +G
Sbjct: 3279 LDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGD 3338
Query: 68 -LSTVNAT--------------IGVNRCGH 82
+ TV+AT IG N+ GH
Sbjct: 3339 VILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
DRE+ + L V+D P L+ +++ D+NDN P+F + I + E G
Sbjct: 2027 AFDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTIIQDGTEPG 2086
Query: 67 ----SLSTVNATIGVN 78
+S + +G N
Sbjct: 2087 DVLFQVSATDEDLGTN 2102
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T + LDRE + V RD + + LTD NDN P+F + + SI
Sbjct: 2536 QIATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKIILTDENDNPPQFKASEYTVSIQ 2595
Query: 61 EN 62
N
Sbjct: 2596 SN 2597
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 6 RGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDN--APEFASVINSASILEN 62
R LD E+ A Y L+ D +P A + + + + D+N+N P FAS ++ + EN
Sbjct: 985 RELDFERRAGYNLSLWASDGGRPLARRTLCHVEVIVLDVNENLHPPHFASFVHQGQVQEN 1044
Query: 63 AEIGSLSTVNA 73
+ G+ V A
Sbjct: 1045 SPSGTQVIVVA 1055
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ + + LDRE A+Y L D A V + L D+NDN+P+ + ++ + + E
Sbjct: 2966 ISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVL---DVNDNSPQCSQLLYTGKVHE 3022
Query: 62 N 62
+
Sbjct: 3023 D 3023
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIAR-YTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASI 59
+ T++ +D E + R YT D P E I L L ++NDN P F V + SI
Sbjct: 514 ISTSKPMDYELMKRIYTFRVRASDWGSPFRREKEVSIFLQLRNLNDNQPMFEEVNCTGSI 573
Query: 60 LENAEIG-SLSTVNA 73
++ +G S+ T++A
Sbjct: 574 RQDWPVGKSIMTMSA 588
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD+ A +TL +D+ P W ++ + + + + +AP F+ I E+
Sbjct: 1615 AQKLDQANHAPHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIP 1674
Query: 65 IGS 67
+GS
Sbjct: 1675 VGS 1677
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LD EKI+ Y L ++ + ++ + + D NDNAP F I E
Sbjct: 1712 ISTQKKLDHEKISSYQLK--IRGSNMAGAFTDVMVVVDIIDENDNAPMFLKSTFVGQISE 1769
Query: 62 NAEIGSL 68
A + S+
Sbjct: 1770 AAPLYSM 1776
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+++ R LDREK++ Y L D+ P+ + + + D NDNAP F+ + SA +
Sbjct: 2724 EIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF-SAHVP 2782
Query: 61 ENAEIG----SLSTVNATIGVN 78
EN+ +G ++T + IG+N
Sbjct: 2783 ENSPLGYTVTRVTTSDEDIGIN 2804
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L + GLDRE +Y L V+D+ +P + +T+ DINDN P F S A + E
Sbjct: 202 LVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE 261
Query: 62 NAEIGS 67
+A +GS
Sbjct: 262 DAVVGS 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE+ A Y+L D P ++ I ++L DINDN+P F V A I E
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKE 700
Query: 62 NAEIGS-LSTVNAT 74
N GS ++TV+AT
Sbjct: 701 NEPGGSYITTVSAT 714
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ LDRE+++ YTL D+ QP+ + + + + DINDN P FA + I
Sbjct: 2105 EVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEIN 2164
Query: 61 ENAEIGS 67
EN G+
Sbjct: 2165 ENTLTGT 2171
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE R+ L D PA I + + D+NDN P FAS +I
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIP 2374
Query: 61 ENAEIGS 67
E+A G+
Sbjct: 2375 EDAPTGT 2381
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ ++ LD EKI +Y + +D P + + +T+ D+NDNAP F + IL
Sbjct: 2620 QVSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEIL 2679
Query: 61 ENAEIGSLSTVNA 73
EN + TV+A
Sbjct: 2680 ENLSPRKILTVSA 2692
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ +R L+RE RY + D W + +T+ +TDINDNAP F+
Sbjct: 2826 DIVISRPLNREDTDRYRIRVSAHDS---GWTVSTDVTIFVTDINDNAPRFSRTSYYLDCP 2882
Query: 61 ENAEIGS 67
E EIGS
Sbjct: 2883 ELTEIGS 2889
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR-DQP------AWECVSLITLTLTDINDNAPEFASVI 54
+K A LDRE+I Y L V D P A V+ + + + DIND+ P F+ +
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 55 NSASILENAEIGS-LSTVNATIG 76
++ E A GS +S ++AT G
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDG 502
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE 64
A+ LD E + Y LN +D+ +P + + + D NDN P F SI+EN
Sbjct: 1375 AKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIP 1434
Query: 65 IGS 67
IG+
Sbjct: 1435 IGT 1437
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LDREK Y L DR S +++ L DIND P F S ++ E
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270
Query: 62 NAEIGSL 68
N +G+L
Sbjct: 2271 N--LGTL 2275
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L+ D P+ + + +TL DINDN P ++ ++EN G+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 68 L 68
L
Sbjct: 3526 L 3526
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L R LDRE+ ++Y+L D Q I +T++D+ND+ P+F+ + S I
Sbjct: 1795 DLIATRRLDRERRSKYSLLVRADDGLQ---SSDMRINITVSDVNDHTPKFSRPVYSFDIP 1851
Query: 61 ENAEIGSL 68
E+ GSL
Sbjct: 1852 EDTIPGSL 1859
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PA--WECVSLITLTLTDINDNAPEFAS 52
LK + LDRE + Y L V D Q PA + + +++ L D+NDN P F S
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS 2053
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L TA +DRE+ + Y L +++ +T+ D+NDN+P F I S +++
Sbjct: 847 QLTTANVIDREEQSFYQLKVVASGG---TVTGDTMVNITVKDLNDNSPHFLQAIESVNVV 903
Query: 61 ENAEIG 66
EN + G
Sbjct: 904 ENWQAG 909
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LDRE+ Y L D +++T+T+ D DN P F+ V S + E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 62 NAEIG 66
N +G
Sbjct: 805 NVALG 809
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP-----EFASVINSASILEN 62
LD E +Y+L DR P+ + + L D+NDN P F + AS+ EN
Sbjct: 311 LDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDEN 370
Query: 63 AEIGSL 68
A++G++
Sbjct: 371 AQVGTV 376
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVIN-SASIL 60
++ GLDRE ++ LN + RDQ VS + +TL D+ND P F+ S++
Sbjct: 536 SSGGLDRELASQIVLN--ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVV 593
Query: 61 ENAEIGS 67
ENA G+
Sbjct: 594 ENAPTGT 600
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
G I R++ DR +P+ + +T+ + D NDNAP+F + +N ++G
Sbjct: 2940 GFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVG 2999
Query: 67 S 67
+
Sbjct: 3000 T 3000
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
L T R +DRE+IA + L+ +D P + +T+ D NDN + +V
Sbjct: 3566 LSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSRTV 3617
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L LDRE RY L DR +T+ L D+NDN P F S N
Sbjct: 1051 QLYIKSELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNST-NYTFYF 1109
Query: 61 ENAE-----IGSLSTVNATIGVN 78
E + +G +S V+ G N
Sbjct: 1110 EEEQRAGSFVGKVSAVDKDFGPN 1132
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L A+ LD E ++ + D A +T+ + D+NDN+P F S ++LE
Sbjct: 3146 LTLAKALDYELCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLE 3205
Query: 62 NAEIGS----LSTVNATIGVN 78
NA G+ L+ +A G N
Sbjct: 3206 NAPSGTTVIHLNATDADSGTN 3226
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y+L D + + + D NDN P F +LEN IG
Sbjct: 1273 LDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGE 1332
Query: 68 L-STVNAT 74
L S+V AT
Sbjct: 1333 LVSSVTAT 1340
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEF 50
++ T+ LDRE YTL D P + + +T+TD+NDN P F
Sbjct: 2416 QIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF 2466
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 16 YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSL 68
+ + +D+ P + + +T+T+ N + PEF+ SA+I E+ IGS+
Sbjct: 3055 FFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSI 3107
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 1 ELKTARGLDREKIAR--------YTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
E+ DRE + R +T+ A Q QP + + + + + DINDNAP+F
Sbjct: 1154 EITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQAT-VHVYMKDINDNAPKFLK 1212
Query: 53 VINSASILENA 63
A+I E+A
Sbjct: 1213 DFYQATISESA 1223
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSL-ITLTLTDINDNAPEFASVINSASILENAE 64
R LD E Y L +D + ++ + + D+NDN P F+ S S++EN
Sbjct: 1902 RLLDYEVQQYYILTVRAEDG---GGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLP 1958
Query: 65 IGS 67
+GS
Sbjct: 1959 VGS 1961
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 2 LKTARGLDREKIA-RYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSAS 58
++TA LDRE+ A Y ++ + ++ P + + +TL DINDN P F + + +
Sbjct: 1690 IQTAAILDREQGACLYLVDVYAIEKSTAFPRTQRAE-VEITLQDINDNPPVFPTDMLDLT 1748
Query: 59 ILENAEIGS----LSTVNATIGVN 78
+ EN GS L+ ++A G N
Sbjct: 1749 VEENIGDGSKIMQLTAMDADEGAN 1772
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL T R LDRE+I+ +TL D P V + + + D ND++P F ++ +S+
Sbjct: 1429 ELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVR 1488
Query: 61 ENAEIGS----LSTVNATIGVN 78
E+AE+G+ LS V+ G+N
Sbjct: 1489 EDAEVGTVVLVLSAVDKDEGLN 1510
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE +TL V+D P+ + I T+ D ND+APEF +L
Sbjct: 1325 EVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVL 1384
Query: 61 ENAEIGSLSTVNAT---IGVNRC--GHTFRGKDLRCYNL 94
EN E + TV A+ G NR H G C+ +
Sbjct: 1385 ENQEPEVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTI 1423
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE A + L D P ++I++ + D+NDN P F+S+ + E+ +GS
Sbjct: 2168 LDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGS 2227
Query: 68 LSTV 71
TV
Sbjct: 2228 HITV 2231
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LD E ++ L D PA +T+T+ D+ND AP F + AS+ E
Sbjct: 1221 LTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE 1280
Query: 62 NAEIGSLST 70
N G T
Sbjct: 1281 NQNPGEFVT 1289
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
LD E + Y+L D+ P ++I + +TDINDNAP F
Sbjct: 1850 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF 1892
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
EL LDRE + + V DR P + +++TDINDN P F
Sbjct: 790 ELINWVALDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 839
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD EK+ ++TL D ++ + +++ +++ D ND+AP+F S + EN I S
Sbjct: 2273 LDYEKMTKFTLTVQASDAEKKHFS-FAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2331
Query: 68 -LSTVNA 73
+ ++NA
Sbjct: 2332 TICSINA 2338
Score = 33.1 bits (74), Expect = 0.45, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTDINDNAP 48
LKT+ LDRE +++T +A +D Q + +I + +TD+NDN P
Sbjct: 1534 LKTSNTLDREARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDP 1581
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 24 DRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
D P ++L+ + + D+N+ APEF + S+ E+A +GS
Sbjct: 2068 DGGNPDLRALTLVEIGIEDMNNYAPEFTVKSYNLSLSEDALVGS 2111
>sp|Q5DRA2|PCDGM_PANTR Protocadherin gamma-C5 OS=Pan troglodytes GN=PCDHGC5 PE=3 SV=1
Length = 944
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGS-LSTVNAT 74
N GS L TV A+
Sbjct: 466 NRPPGSLLCTVAAS 479
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVEVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>sp|Q9Y5F6|PCDGM_HUMAN Protocadherin gamma-C5 OS=Homo sapiens GN=PCDHGC5 PE=2 SV=1
Length = 944
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE AR+ L D PA +LI++ + DINDNAP F S + I
Sbjct: 193 ELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAPTFQSSVLRVGIP 252
Query: 61 ENAEIGS-LSTVNAT 74
ENA IG+ L +NAT
Sbjct: 253 ENAPIGTLLLRLNAT 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T++ LDRE + Y + D P+ I L ++D+NDNAP F + +A ILE
Sbjct: 406 LLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILE 465
Query: 62 NAEIGSL 68
N GSL
Sbjct: 466 NRPPGSL 472
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPE--FASVINSASILENAEI 65
+D E+ Y ++A +D+ QPA E +I + + D+NDNAPE AS+ N +LE+ +
Sbjct: 308 IDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLAN--PVLESTPV 365
Query: 66 GSL 68
G++
Sbjct: 366 GTV 368
>sp|Q5RAX1|CADH1_PONAB Cadherin-1 OS=Pongo abelii GN=CDH1 PE=2 SV=1
Length = 882
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 28/68 (41%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TD NDN P F + E+
Sbjct: 332 GLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPVFNPTTYKGQVPEDEANV 391
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 392 VITTLKVT 399
>sp|P12830|CADH1_HUMAN Cadherin-1 OS=Homo sapiens GN=CDH1 PE=1 SV=3
Length = 882
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LDRE+IA YTL +H + A E I +T+TD NDN PEF + S++E
Sbjct: 214 LKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVME 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMEVTAT 287
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 28/68 (41%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+TD NDN P F + EN
Sbjct: 332 GLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPIFNPTTYKGQVPENEANV 391
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 392 VITTLKVT 399
>sp|D3ZE55|PCDH8_RAT Protocadherin-8 OS=Rattus norvegicus GN=Pcdh8 PE=1 SV=2
Length = 1069
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L A +D E+ Y L+ QDR + + + D+NDNAP+ +
Sbjct: 306 LTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPDIS 355
>sp|Q6R8F2|CADH1_BOVIN Cadherin-1 OS=Bos taurus GN=CDH1 PE=2 SV=1
Length = 882
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE+IA+Y L +H + A E I +T+TD NDN P+F + AS LE
Sbjct: 214 LKVTQPLDREQIAKYILFSHAVSSNGQAIEEPMEIVITVTDQNDNKPQFTQEVFKASALE 273
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V AT
Sbjct: 274 GALPGTSVMQVTAT 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + + +T+ D NDNAP F S+ EN
Sbjct: 332 GLDRESFPTYTLMVQAADLNGEGLSTTATAVITVLDTNDNAPRFNPTTYVGSVPENEANV 391
Query: 67 SLSTVNAT 74
+++T+ T
Sbjct: 392 AITTLTVT 399
>sp|Q7TSK3|PCDH8_MOUSE Protocadherin-8 OS=Mus musculus GN=Pcdh8 PE=2 SV=1
Length = 1070
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGTPPLRTVRPYTVRVGDENDNAPIFTKPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQASYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L A +D E+ Y L+ QDR + + + D+NDNAPE +
Sbjct: 306 LTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPEIS 355
>sp|O95206|PCDH8_HUMAN Protocadherin-8 OS=Homo sapiens GN=PCDH8 PE=2 SV=2
Length = 1070
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TA LDRE+IA Y L +DR P V T+ + D NDNAP F + S+ EN
Sbjct: 451 TAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENN 510
Query: 64 EIGS-LSTVNA 73
G+ L+TV A
Sbjct: 511 PPGAYLATVAA 521
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS-VINSASILENAEIG 66
LDRE A Y+L QD +P + +++ + D ND++P F + + E+A +G
Sbjct: 203 LDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVG 262
Query: 67 SL 68
SL
Sbjct: 263 SL 264
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFA 51
L A +D E+ Y L+ QDR + + + D+NDNAP+ A
Sbjct: 306 LTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIA 355
>sp|Q9Y5G9|PCDG4_HUMAN Protocadherin gamma-A4 OS=Homo sapiens GN=PCDHGA4 PE=2 SV=1
Length = 931
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA I E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTRLLTVKAT 267
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLD E Y ++ V+ D P S + +T+ D NDNAPE ++S+ E++ G
Sbjct: 306 GLDYEDSGFYDID--VEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPG 363
Query: 67 SL 68
++
Sbjct: 364 TV 365
>sp|Q9Y5F8|PCDGJ_HUMAN Protocadherin gamma-B7 OS=Homo sapiens GN=PCDHGB7 PE=2 SV=1
Length = 929
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G+N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGLNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTINIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + + L D P + I + + D NDN P F+ + S+
Sbjct: 193 ELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLR 252
Query: 61 ENAEIG-SLSTVNAT 74
E+ G S+ V AT
Sbjct: 253 EDVPPGTSILRVKAT 267
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R D E++ + L +D+ PA + + + D NDNAP
Sbjct: 518 RAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAP 560
>sp|P08641|CADH1_CHICK Cadherin-1 OS=Gallus gallus GN=CDH1 PE=1 SV=2
Length = 887
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 LKTARGLDREKIARYTLNAH-VQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
L+ LDREKI RYTL +H V QP + + +I +T+ D NDN P F + I
Sbjct: 220 LEVTEQLDREKIDRYTLLSHAVSASGQPVEDPMEII-ITVMDQNDNKPVFIKEVFVGYIE 278
Query: 61 ENAEIG-SLSTVNAT 74
ENA+ G S+ TVNAT
Sbjct: 279 ENAKPGTSVMTVNAT 293
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN---A 63
GLDRE YTL D++ + + +TD NDN P F + + EN
Sbjct: 338 GLDRETTPNYTLIVQATDQEGKGLSNTATAIIEVTDANDNIPIFNPTMYEGVVEENKPGT 397
Query: 64 EIGSLSTVN 72
E+ L+ +
Sbjct: 398 EVARLTVTD 406
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDR---DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
LKTA+GLD E +RY L V+++ P + + +T+ D+N+ P F I
Sbjct: 443 LKTAKGLDYETKSRYDLVVTVENKVPLSVPITLSTASVLVTVLDVNE-PPVFVPPIKRVG 501
Query: 59 ILENAEIGSLST 70
+ E+ +G T
Sbjct: 502 VPEDLPVGQQVT 513
>sp|Q5DRB6|PCDG4_PANTR Protocadherin gamma-A4 OS=Pan troglodytes GN=PCDHGA4 PE=3 SV=1
Length = 931
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+++ Y + D+ P + I+L + DINDN P F SA + E
Sbjct: 404 LLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYVPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + TF+G L Y
Sbjct: 464 NNPRGASILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + L D NDNAP F S+
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVH 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TV AT
Sbjct: 253 ENVPVGTLLLTVKAT 267
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD E Y ++ V+ D P S + +T+ D NDNAPE ++S+ E + G+
Sbjct: 307 LDYEDSGFYDID--VEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQETSSPGT 364
Query: 68 L 68
+
Sbjct: 365 V 365
>sp|Q5DRD0|PCDB4_PANTR Protocadherin beta-4 OS=Pan troglodytes GN=PCDHB4 PE=3 SV=1
Length = 795
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP FA + + E
Sbjct: 402 LVTERPLDRETSAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFAQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 462 NNSPALHIGSVSATDRDSGTN 482
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++L D P ++ + + DINDNAPEF +L
Sbjct: 192 DLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQVL 251
Query: 61 ENAEIGS 67
EN+ + S
Sbjct: 252 ENSPLDS 258
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 516 RSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSP 558
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD EKI Y + ++ D + + + D+NDN PE ++SI
Sbjct: 299 EILLKKKLDFEKIKSY--HVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIP 356
Query: 61 ENA 63
ENA
Sbjct: 357 ENA 359
>sp|P09803|CADH1_MOUSE Cadherin-1 OS=Mus musculus GN=Cdh1 PE=1 SV=1
Length = 884
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK + LDRE IA+Y L +H + A E I +T+TD NDN PEF + S+ E
Sbjct: 216 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 275
Query: 62 NAEIG-SLSTVNAT 74
A G S+ V+AT
Sbjct: 276 GAVPGTSVMKVSAT 289
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
GLDRE YTL D + +T+ DINDNAP F + EN
Sbjct: 334 GLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNA 393
Query: 67 SLSTVNAT 74
++T+ T
Sbjct: 394 RIATLKVT 401
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L+ LDRE + Y LN +DR +P S + + + D NDN+P F SAS+
Sbjct: 2229 QLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVA 2288
Query: 61 ENAEIGSL 68
ENA IG++
Sbjct: 2289 ENASIGAM 2296
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAE--- 64
LDRE+ Y L +D QP+ V + + + D NDNAP+F + + SI ENA
Sbjct: 1111 LDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADT 1170
Query: 65 -IGSLSTVNATIGVN 78
+G L+ V+ IG N
Sbjct: 1171 FVGKLTAVDRDIGRN 1185
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
GLD E Y + D D P+ V+LITL +TD NDNAP +I +A +LE
Sbjct: 2767 GLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLE 2821
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T LDRE+I Y D+ P + + L L D NDN P+F + S ++
Sbjct: 2864 EIYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLF-SLNVT 2922
Query: 61 ENAEIGSL 68
ENAEIGS
Sbjct: 2923 ENAEIGSF 2930
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E++ Y L QD QP+ + + D+NDNAP F + S+ + EN
Sbjct: 1982 TAR-LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENV 2040
Query: 64 EIGS-LSTVNA 73
I + + TV+A
Sbjct: 2041 PIATEVVTVSA 2051
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+I +Y L D+ PA + + + + D+ND+ P F SA + E A GS
Sbjct: 452 LDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 68 -LSTVNAT---IGVNRCGH--TFRGKDLRCYNL 94
++++ AT GVN H G +L+ +++
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFSM 544
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS---LITLTLTDINDNAPEFASVINSAS 58
+ T R +DRE I + L DR QP+ +S L+T+ + DINDNAP F S+ +A+
Sbjct: 1550 IHTLREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM--NAA 1607
Query: 59 IL 60
IL
Sbjct: 1608 IL 1609
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LD + I Y LN VQD V+++T+ LTD+NDN P F I EN +G+
Sbjct: 3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGT 3351
Query: 68 L 68
Sbjct: 3352 F 3352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRD--QPAWECVSLITLTLTDINDNAPEFASVINSAS 58
E+ TA LDRE+ + Y L QD +P V+L T++++D+NDN P+F S + +
Sbjct: 2546 EISTATTLDREETSVYHLTLMAQDSSITEPRASSVNL-TISVSDVNDNIPKFDSTTYNVA 2604
Query: 59 ILENAEIGSL----STVNATIGVNRCGH-TFRGKDLRCYNL 94
+ E G ++ G N H T G+D +++
Sbjct: 2605 VPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDI 2645
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE+ Y L D AW + IT+T+ D NDNAPEF S S E
Sbjct: 2968 ITVAGHLDREQQDEYILKVVASDG---AWRAETPITITIQDQNDNAPEFEHSFYSFSFPE 3024
Query: 62 NAEIGSLSTVNATIGVNR 79
+ S++ V I +R
Sbjct: 3025 LQQ--SIALVGQIIATDR 3040
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWE-CVSLITLTLTDINDNAPEF 50
+L T R LDREK+++Y ++ +D+ P + + + L + D+NDN P+F
Sbjct: 658 QLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQD--RDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++ A+ L+ E+++RY+L +D + PA + L T+ + DINDN P F A +
Sbjct: 2335 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAEL-TINILDINDNRPTFLDSPYLARV 2393
Query: 60 LEN---AEIGSLSTVNA 73
+EN G + TVNA
Sbjct: 2394 MENTVPPNGGYVLTVNA 2410
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+ + YTL D P ++ + + DINDN P F A++ EN
Sbjct: 2447 KPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPS 2506
Query: 66 GS 67
G+
Sbjct: 2507 GT 2508
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ TA LDRE+ + Y L D P + + + L D+NDN P F + I
Sbjct: 3602 EISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYIS 3661
Query: 61 ENAEIGS--LSTVNATIGVNRCGHTF 84
EN G+ ++ + + + R G F
Sbjct: 3662 ENEPAGTSIMTLIASDPDLPRNGGPF 3687
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA---- 63
LDRE ++Y L V D Q + T+ ++D NDN P F + S I ENA
Sbjct: 1883 LDRETKSKYELRIRVSDGVQ---YTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGY 1939
Query: 64 EIGSLSTVNATIGVN 78
++G + +A +G N
Sbjct: 1940 QVGQIVARDADLGQN 1954
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T LDRE Y LN +D P + +T+ D+NDN P F + S+ E
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Query: 62 NAEIGS 67
A G+
Sbjct: 282 TALPGT 287
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52
+ LD E I YTLN D P+ L + + D NDN P F S
Sbjct: 1445 KPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPS 1491
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 22/88 (25%)
Query: 2 LKTARGLDREKIARYTLNAH----------------------VQDRDQPAWECVSLITLT 39
+KT R DRE + + + NA V D P + + +
Sbjct: 1208 IKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVI 1267
Query: 40 LTDINDNAPEFASVINSASILENAEIGS 67
+TD+NDNAPEF +I E A G+
Sbjct: 1268 VTDVNDNAPEFLRAPYHVTISEGASEGT 1295
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDR--DQPAWECVSLITLTLTDINDNAPEFASVINSAS 58
+L R LDRE + L +D P S IT+ + D NDNAPEF + S
Sbjct: 1334 QLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNAS-ITIVVLDENDNAPEFTQSSSEVS 1392
Query: 59 ILENAEIGS 67
+LE + G+
Sbjct: 1393 VLETSPTGT 1401
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 2 LKTARGLDREKIARYTLN--------AHVQDRDQPAWECVSLITLTLTDINDNAPEFASV 53
+ TAR LDRE+ A Y L + +C+ + + + D+NDNAP FA
Sbjct: 888 ITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCI--VNIAIIDLNDNAPVFALD 945
Query: 54 INSA---SILENAEIG 66
S S+ ENA +G
Sbjct: 946 RESEPTISLPENAAVG 961
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 873 VRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 932
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 933 NSPIGLAVARVTAT 946
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVS-LITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E YTL QD +P VS L+T+ + DINDNAP F S A++LE+ +G
Sbjct: 462 LDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLG 521
Query: 67 SL 68
L
Sbjct: 522 YL 523
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A LDRE++ Y+ +D PA + +++T+ D+NDN P F + + E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 621
Query: 62 NAEIG-SLSTVNATIGVNRCGHT 83
+A +G S+ TV+A V+R H+
Sbjct: 622 DAAVGTSVVTVSA---VDRDAHS 641
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ TA LDRE + + QD P ++ +T+ +TD ND+ P F S+ E
Sbjct: 241 VTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRE 300
Query: 62 NAEIG-SLSTVNATIG 76
N E+G + TV AT G
Sbjct: 301 NLEVGYEVLTVRATDG 316
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 2 LKTARGLDREKIARY--TLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASI 59
++T +DRE++ Y T+ A Q RD + + L++ D NDNAP+F+ +
Sbjct: 349 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 60 LENAEIGS 67
E+ G+
Sbjct: 409 REDVTPGA 416
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E YTL +D P + + + + D+NDNAP+F S+ E
Sbjct: 767 VTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYE 826
Query: 62 N----AEIGSLSTVNATIGVN-RCGHTFR 85
+ + +S + G+N R +TF+
Sbjct: 827 DVPPFTSVLQISATDRDSGLNGRVFYTFQ 855
>sp|Q5DRD7|PCDBC_PANTR Protocadherin beta-12 OS=Pan troglodytes GN=PCDHB12 PE=3 SV=1
Length = 795
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 403 LETERPLDRESRAEYNITITVTDLGTPRLKTEHNITLLISDVNDNAPAFTQTSYTLFLCE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSISATDRDSGTN 483
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E++ + D P +L+ + + DINDN+PEF IL
Sbjct: 193 ELVLDKALDYEELPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIL 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSILGSLVVTVSA 266
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + D PA +L+ + + D NDN+P
Sbjct: 517 RSLDYEALQAFEFRVGASDHGSPALSSEALVRVLVLDANDNSP 559
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE +A+Y L A+ D+ P +T+T+ D+NDN P F + E
Sbjct: 98 VRTLRRLDRENVAQYILRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEE 157
Query: 62 NAEIG-SLSTVNAT 74
N+ IG +++ V AT
Sbjct: 158 NSPIGLAVARVTAT 171
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN----AEIG 66
E YTL +D P + + + + D+NDNAP+F S+ E+ +
Sbjct: 1 EDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVL 60
Query: 67 SLSTVNATIGVN-RCGHTFR 85
+S + G+N R +TF+
Sbjct: 61 QISATDRDSGLNGRVFYTFQ 80
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND++P F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F + + + E+A
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDA 965
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+ T+ +DRE + Y L D+ Q P ++ + +T+ D NDNAP+F+ A +
Sbjct: 486 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 545
Query: 60 LEN 62
E+
Sbjct: 546 RED 548
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE + Y L A+ DR P I +T+ D+NDNAP F + + E
Sbjct: 1010 VRTVRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE 1069
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1070 NSIVGSV 1076
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND+AP F ++ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 62 NAEIG 66
N E G
Sbjct: 436 NVEEG 440
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 705 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 764
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 765 -SVVSVT 770
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+AP F S S+
Sbjct: 592 EIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSV 651
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 652 LENAPLGHSVIHIQAVDADHGEN 674
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F + + + E+A
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDA 965
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+ T+ +DRE + Y L D+ Q P ++ + +T+ D NDNAP+F+ A +
Sbjct: 486 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 545
Query: 60 LEN 62
E+
Sbjct: 546 RED 548
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y L +D P+ + + + +TD+NDNAP F S + ASILE+A +G+
Sbjct: 965 LDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGT 1024
Query: 68 ----LSTVNATIGVN 78
++ + +G+N
Sbjct: 1025 SVIQVAASDPDVGLN 1039
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T +GLDRE +A + L A D+ P + + L D+ND+ P FAS + + E
Sbjct: 1065 IRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPE 1124
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1125 NSPVGSV 1131
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T + LDRE+ R+ +D P S + +T+ D+NDN P F A++ E
Sbjct: 746 VQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGE 805
Query: 62 NAEIGS-LSTVNAT 74
+ G+ ++TV AT
Sbjct: 806 DQPPGTPVTTVTAT 819
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ + LD E + Y L QD P+ + + + + D NDNAP F + S+L
Sbjct: 640 DVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVL 699
Query: 61 ENAEIG 66
EN +G
Sbjct: 700 ENVPVG 705
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ A+ LD ++ R+ L V D + + + +TD N+ AP F + SAS+ E
Sbjct: 851 ITIAQSLDYKQEKRFLLT--VAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 62 NAEIGS----LSTVNATIGVN 78
+A +G+ +S ++ +GVN
Sbjct: 909 DAPVGTTVLVVSATDSDVGVN 929
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T+ LDRE + + D P + + + + D ND++P F + ASI E
Sbjct: 416 VTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIRE 475
Query: 62 NAEIGS----LSTVNATIGVN 78
A +GS L + IG N
Sbjct: 476 GATVGSTVITLRATDQDIGKN 496
>sp|Q6PB90|PCDBE_MOUSE Protocadherin beta-14 OS=Mus musculus GN=Pcdhb14 PE=1 SV=2
Length = 796
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ A+ L D P + + + + DINDNAPEFA + +
Sbjct: 193 ELVLDKALDREEQAQIRLTLTAMDSGSPPKTGTTQVVIVVLDINDNAPEFAQGLYEVQVQ 252
Query: 61 ENAEIGSLS-TVNA 73
EN+ +GSL TV+A
Sbjct: 253 ENSPVGSLVLTVSA 266
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P IT+ ++DINDNAP F + + E
Sbjct: 403 LVTERALDRESRAEYNITITVSDMGTPRLTTQHTITVQVSDINDNAPAFTHTSYTMFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IG++S ++ G N
Sbjct: 463 NNSPALHIGTISATDSDSGSN 483
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ + LD E+I Y + D + +C + + + D+NDNAPE + + I
Sbjct: 300 EIRVRKLLDFEEIQSYRMEIEASDGGGLSGKCT--VVIHVMDVNDNAPELTMSVLISEIP 357
Query: 61 ENAEIGSLSTVNATIGVN 78
EN S T+ A G++
Sbjct: 358 EN----SPETIVAIFGIS 371
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
+L R LD E + + + D PA +L+ + + D NDNAP
Sbjct: 512 QLFALRALDYEALQAFEFHVGATDGGSPALSSQALVRVVVLDDNDNAP 559
>sp|Q5DRA5|PCDGJ_PANTR Protocadherin gamma-B7 OS=Pan troglodytes GN=PCDHGB7 PE=3 SV=1
Length = 929
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L T LDRE+ Y + DR +P ITL +TD+NDNAP F +
Sbjct: 403 KLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVP 462
Query: 61 EN----AEIGSLSTVNATIGVN-RCGHTFRGKDLRCYNL 94
EN A I +S + G N R ++ DL L
Sbjct: 463 ENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLESRTL 501
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T + LD E++ RYT+N +DR + C + + + D NDN+PE S I+E++
Sbjct: 303 TQQPLDFEEVERYTMNIEAKDRGSLSTRCK--VIVEVVDENDNSPEIIITSLSDQIMEDS 360
Query: 64 EIG 66
G
Sbjct: 361 PPG 363
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE + + L D P + I + + D NDN P F+ + S+
Sbjct: 193 ELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLR 252
Query: 61 ENAEIG-SLSTVNAT 74
E+ G S+ V AT
Sbjct: 253 EDVPPGTSILRVKAT 267
Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R D E++ + L +D+ PA + + + D NDNAP
Sbjct: 518 RAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAP 560
>sp|Q5DRB9|PCDGC_PANTR Protocadherin gamma-A12 OS=Pan troglodytes GN=PCDHGA12 PE=3 SV=1
Length = 932
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRSVDDKAAQVFK 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 469
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 470 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 504
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>sp|Q5DRB7|PCDG3_PANTR Protocadherin gamma-A3 OS=Pan troglodytes GN=PCDHGA3 PE=3 SV=1
Length = 932
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKREIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>sp|Q9Y5H0|PCDG3_HUMAN Protocadherin gamma-A3 OS=Homo sapiens GN=PCDHGA3 PE=2 SV=2
Length = 932
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LDRE+I+ Y ++ D P + ITL + DINDN P F + SA I E
Sbjct: 404 LVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPE 463
Query: 62 NAEIGS 67
N G+
Sbjct: 464 NNPRGA 469
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDREK + L D P I + + D NDN P F S+
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 61 ENAEIGS-LSTVNAT 74
EN +G+ L TVNAT
Sbjct: 253 ENVPVGTRLLTVNAT 267
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD E Y + QD P + I +T+ D+NDNAPE ++S+
Sbjct: 300 EVSILKSLDYEDAMFYEIKIEAQD--GPGLLSRAKILVTVLDVNDNAPEITITSLTSSVP 357
Query: 61 ENAEIG 66
E +G
Sbjct: 358 EEGTVG 363
>sp|Q9Y5G8|PCDG5_HUMAN Protocadherin gamma-A5 OS=Homo sapiens GN=PCDHGA5 PE=2 SV=1
Length = 931
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V D P S I L + D+NDN P F S S+ E
Sbjct: 404 LLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 464 NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P + I +T+ D NDNAP F S S+
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L+ + G+N + ++FR ++ + F+
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQ 293
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E+ Y + QD A + + +T+ D+NDNAPE ++SI
Sbjct: 300 EISTLQSLDYEESRFYLMEVVAQDGG--ALVASAKVVVTVQDVNDNAPEVILTSLTSSIS 357
Query: 61 ENAEIGSL 68
E+ G++
Sbjct: 358 EDCLPGTV 365
>sp|Q9NRJ7|PCDBG_HUMAN Protocadherin beta-16 OS=Homo sapiens GN=PCDHB16 PE=1 SV=3
Length = 776
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ + L D P + + + + DINDNAPEF I I
Sbjct: 193 ELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252
Query: 61 ENAEIGSL-STVNA 73
EN+ +GSL +TV+A
Sbjct: 253 ENSPLGSLVATVSA 266
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 517 RSLDYEALREFEFRVSATDRGSPALSSEALVRVLVLDANDNSP 559
>sp|Q5DRC9|PCDB5_PANTR Protocadherin beta-5 OS=Pan troglodytes GN=PCDHB5 PE=3 SV=1
Length = 795
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N +IGS+S + G N
Sbjct: 462 NNSPALQIGSVSATDRDSGTN 482
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P + I + + D NDNAPEF + +
Sbjct: 193 ELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSLYEVQVP 252
Query: 61 ENAEIGSLSTV 71
EN+ + SL V
Sbjct: 253 ENSPLNSLVVV 263
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E++ R LD E Y + D + +C + + + D+NDNAPE S+ I
Sbjct: 299 EIRLKRALDFEATPYYNVEIVATDGGGLSGKCT--VAMEVVDVNDNAPELTMSTLSSPIP 356
Query: 61 ENA 63
ENA
Sbjct: 357 ENA 359
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 516 RSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSP 558
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE++ Y L A D C S + L L D+NDN P F+S +A +
Sbjct: 3083 ELKTLALLDRERVPVYNLIARATDGG--GRFCSSTVLLLLEDVNDNPPVFSSNHYTACVY 3140
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ +G+NR
Sbjct: 3141 ENTATKALLTRVQAVDPDVGINR 3163
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3397 VKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE 3456
Query: 62 NAEIGS 67
N +G+
Sbjct: 3457 NKPVGT 3462
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D +P L+T+ + D NDN+P F S SIL
Sbjct: 781 QLKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSIL 840
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 841 ESSSIGT 847
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1517 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1576
Query: 62 NAEIGSL 68
+A +GS+
Sbjct: 1577 SAALGSV 1583
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E R+ L +D PA + +++ LTD+NDN P F+ + SA I E+A
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDA 3353
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 888 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLED 947
Query: 63 AEIGSL 68
+G++
Sbjct: 948 LPVGTV 953
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 2347 TARMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELA 2406
Query: 64 EIGSLST 70
G T
Sbjct: 2407 PRGHFVT 2413
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1832 IRTIANLDHEVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVL 1891
Query: 60 LENAEIG 66
L +G
Sbjct: 1892 LLPTYVG 1898
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---- 61
R LDRE+ Y LN D + +++ +T++D+NDN+P V SAS+ E
Sbjct: 2987 RPLDREEQDIYFLNITASD---GLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPS 3043
Query: 62 NAEIGSLSTVNATIGVN 78
N I +S +A IG N
Sbjct: 3044 NKIILKVSAKDADIGSN 3060
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSL--ITLTLTDINDNAPEFASVINSASILENAEI 65
LDRE+ + Y ++ D+ P SL +T+T+ DINDN P F ++ E+ +
Sbjct: 3192 LDREQQSSYNISVRATDQ-SPGQSLSSLTSVTITVLDINDNPPVFERRDYLVTVPEDTSL 3250
Query: 66 G----SLSTVNATIGVN 78
G S+ + IG N
Sbjct: 3251 GTQVLSVFATSKDIGTN 3267
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E ++ D + + ++L+++ +TDINDNAP FA + ++
Sbjct: 2874 ISTLKDLDHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVK 2933
Query: 61 ENAEIGSLSTVNATI 75
E+ G + V +T+
Sbjct: 2934 ESDPPGEVVAVLSTL 2948
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE A Y L + DR + + + D+NDNAP + I ++EN+
Sbjct: 1105 LDRETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENS 1160
Score = 32.3 bits (72), Expect = 0.94, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ A + L V D + + + + D NDN P+F
Sbjct: 1207 TSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQF 1253
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILEN 62
A+ LD E+ + Y ++ V D A V+ + +T+ D NDN PEF+ +I E+
Sbjct: 1417 AKPLDAEQRSVYNMSVEVTDGTNVA---VTQVFITVLDNNDNGPEFSQPHYDVTISED 1471
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T R LD E + Y L +Q + + +++ + D NDN P F S S+ E
Sbjct: 1722 ITTRRALDYEHTSSYQLI--IQATNMAGMASNATVSVQVVDENDNPPVFLFSQYSGSLSE 1779
Query: 62 NAEIGSL 68
A I SL
Sbjct: 1780 AAPINSL 1786
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
LK LD E ++ Y L D A V+ + L + D+NDN P F + ++ E
Sbjct: 2239 LKVISPLDYEVMSVYKLTVRASDALTGARAEVT-VDLLVDDVNDNPPVFDQPTYNTTLSE 2297
Query: 62 NAEIGS----LSTVNATIGVNRCGH 82
++ IG+ L + +A G N H
Sbjct: 2298 SSLIGTPVLQLVSTDADSGNNNLVH 2322
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 31/59 (52%)
Query: 9 DREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
D + ++ L+ V D+ P +++ ++++ +++ P+F A + EN +IG+
Sbjct: 1629 DMTAMGQFVLSVKVTDQGSPPMSATAIVRISISMSDNSHPKFTHKDYQAEVNENVDIGT 1687
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
++ T LDRE ++ +++ D + + + D NDNAP+F ++ AS+
Sbjct: 2550 QIITTERLDRENPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTLEYRASVR 2609
Query: 61 ENAEIGSLST 70
+ G L T
Sbjct: 2610 ADVGRGHLVT 2619
>sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma-A5 OS=Pan troglodytes GN=PCDHGA5 PE=3 SV=1
Length = 931
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE+ + Y + V D P S I L + D+NDN P F S S+ E
Sbjct: 404 LVTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVPE 463
Query: 62 NAEIG-SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
N G S+ +V NA + + TF+G L Y
Sbjct: 464 NNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSY 504
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDREK + L D P + I +T+ D NDNAP F S S+
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 61 ENAEIGS----LSTVNATIGVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L+ + G+N + ++FR ++ + F+
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQ 293
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ T + LD E+ Y + QD A + + +T+ D+NDNAPE ++S+
Sbjct: 300 EISTLQSLDYEESRFYLMEVVAQDGG--ALVASAKVVVTVQDVNDNAPEVILTSLTSSLS 357
Query: 61 ENAEIGSL 68
E+ G++
Sbjct: 358 EDCLPGTV 365
>sp|Q9Y5F1|PCDBC_HUMAN Protocadherin beta-12 OS=Homo sapiens GN=PCDHB12 PE=2 SV=1
Length = 795
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L+T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LETERPLDRESRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSISATDRDSGTN 483
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LD E+ + D P +L+ + + DINDN+PEF IL
Sbjct: 193 ELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKIL 252
Query: 61 ENAEIGSL 68
EN+ +GSL
Sbjct: 253 ENSILGSL 260
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + D PA +L+ + + D NDN+P
Sbjct: 517 RSLDYEALQGFQFRVGATDHGSPALSSEALVRVLVLDANDNSP 559
>sp|Q9Y5E5|PCDB4_HUMAN Protocadherin beta-4 OS=Homo sapiens GN=PCDHB4 PE=2 SV=1
Length = 795
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE A Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 402 LVTERPLDRETSAEYNITIAVTDLGTPRLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRE 461
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 462 NNSPALHIGSVSATDRDSGTN 482
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+L + LDRE+ ++L D P ++ + + DINDNAPEF +L
Sbjct: 192 DLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQVL 251
Query: 61 ENAEIGS 67
EN+ + S
Sbjct: 252 ENSPLDS 258
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 516 RSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDTNDNSP 558
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ + LD EKI Y + ++ D + + + D+NDN PE ++SI
Sbjct: 299 EILLKKKLDFEKIKSY--HVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIP 356
Query: 61 ENA 63
ENA
Sbjct: 357 ENA 359
>sp|Q9Y5H4|PCDG1_HUMAN Protocadherin gamma-A1 OS=Homo sapiens GN=PCDHGA1 PE=2 SV=1
Length = 931
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAY 504
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D +P I + + D NDN P F ++ EN +G+
Sbjct: 200 LDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
L VNAT G N ++F D R +F+
Sbjct: 260 QLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFR 293
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LD E+ Y++ VQ +D + + + D+NDNAPE + ++
Sbjct: 300 EISNKEPLDFEEYKMYSM--EVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVP 357
Query: 61 ENAEIGSL 68
EN G++
Sbjct: 358 ENFPPGTI 365
>sp|Q5DRC2|PCDG1_PANTR Protocadherin gamma-A1 OS=Pan troglodytes GN=PCDHGA1 PE=3 SV=1
Length = 931
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T R LDRE I+ Y + D+ PA + I+L +TDINDN+P F SA I E
Sbjct: 404 LVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPE 463
Query: 62 N----AEIGSL------STVNATIGVNRCGHTFRGKDLRCY 92
N A I S+ S NA I + T +G L Y
Sbjct: 464 NNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAY 504
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE+ A + L D +P I + + D NDN P F ++ EN +G+
Sbjct: 200 LDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGT 259
Query: 68 -LSTVNATI---GVN-RCGHTFRGKDLRCYNLF 95
L VNAT G N ++F D R +F
Sbjct: 260 QLLMVNATDPDEGANGEVTYSFHNVDHRVAQIF 292
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
E+ LD E+ Y++ VQ +D + + + + D+NDN PE + ++
Sbjct: 300 EISNKEPLDFEEYKMYSM--EVQAQDGAGLMAKAKVLIKVLDVNDNTPEVTITSVTTAVP 357
Query: 61 ENAEIGS----LSTVNATIGVNRCGHTF 84
EN G+ +S + G N C F
Sbjct: 358 ENFPPGTIIALISVHDQDSGDNGCTTCF 385
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++T R LDRE ++ Y L A+ DR P I + + D+NDNAP F + + E
Sbjct: 1019 VRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE 1078
Query: 62 NAEIGSL 68
N+ +GS+
Sbjct: 1079 NSIVGSV 1085
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
++TA LDRE + R+ L QD P +++ +T+ D ND++P F ++ E
Sbjct: 385 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 444
Query: 62 NAEIG 66
N E G
Sbjct: 445 NVEEG 449
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
LDRE + Y +D P + +T+T+ D+NDN PEF + E+A +G+
Sbjct: 714 LDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGT 773
Query: 68 LSTVNAT 74
S V+ T
Sbjct: 774 -SVVSVT 779
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWEC-VSLITLTLTDINDNAPEFASVINSASI 59
E++ LD E Y L QD +P L ++ + DIND+ P F S S+
Sbjct: 601 EIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSV 660
Query: 60 LENAEIG----SLSTVNATIGVN 78
LENA +G + V+A G N
Sbjct: 661 LENAPLGHSVIHIQAVDADHGEN 683
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E YTL +D P + + + + D+NDNAP+F + + + E+A
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDA 974
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSL-ITLTLTDINDNAPEFASVINSASI 59
+ T+ +DRE + Y L D+ Q P ++ + +T+ D NDNAP+F+ A +
Sbjct: 495 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 554
Query: 60 LEN 62
E+
Sbjct: 555 RED 557
>sp|Q5DRF1|PCDAD_PANTR Protocadherin alpha-13 OS=Pan troglodytes GN=PCDHA13 PE=3 SV=1
Length = 950
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF + ++LENA
Sbjct: 198 KTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFYQSVYKVTVLENAFN 257
Query: 66 GSLS-TVNAT 74
G+L +NAT
Sbjct: 258 GTLVIKLNAT 267
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE ++ Y L +D P+ + +++ + D+NDNAP FA + + EN G
Sbjct: 412 ALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPG 471
Query: 67 -SLSTVNA 73
+ TV+A
Sbjct: 472 CHIFTVSA 479
>sp|Q9Y5I0|PCDAD_HUMAN Protocadherin alpha-13 OS=Homo sapiens GN=PCDHA13 PE=2 SV=1
Length = 950
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEI 65
+ LDRE+I ++L D +P + +T+ D+NDNAPEF + ++LENA
Sbjct: 198 KTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFYQSVYKVTVLENAFN 257
Query: 66 GSLS-TVNAT 74
G+L +NAT
Sbjct: 258 GTLVIKLNAT 267
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 7 GLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LDRE ++ Y L +D P+ + +++ + D+NDNAP FA + + EN G
Sbjct: 412 ALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPG 471
Query: 67 -SLSTVNA 73
+ TV+A
Sbjct: 472 CHIFTVSA 479
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
ELKT LDRE+I Y+L A D C S I L L D+NDN P F+S + +
Sbjct: 3084 ELKTLALLDRERIPVYSLMAKATDGG--GRFCQSNIHLILEDVNDNPPVFSSDHYNTCVY 3141
Query: 61 ENAEIGSLST----VNATIGVNR 79
EN +L T V+ IG+NR
Sbjct: 3142 ENTATKALLTRVQAVDPDIGINR 3164
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+K + LDRE+++ Y+L D PA + + + ++D+NDN+P F +A I E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 62 NAEIGS 67
N +G+
Sbjct: 3458 NKPVGT 3463
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG 66
LD E R+ L +D PA V+ + + LTD+NDN P+F+ + SA I E+A +G
Sbjct: 3299 LDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
+LK +DRE Y LN + D P L+T+ + D NDN+P F S +IL
Sbjct: 782 QLKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNIL 841
Query: 61 ENAEIGS 67
E++ IG+
Sbjct: 842 ESSGIGT 848
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L TA LD E ++ LN V+D++ P ++ + + + D ND++P F + + AS+ E
Sbjct: 1518 LYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFE 1577
Query: 62 NAEIGS 67
+A +GS
Sbjct: 1578 SAALGS 1583
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLT--LTDINDNAPEFASVINSASILEN 62
A LDRE A Y+L +D+ + + S++TL L D+ND +P F S +LE+
Sbjct: 889 ADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKVLED 948
Query: 63 AEIGSL 68
+G++
Sbjct: 949 LPVGTV 954
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVS--LITLTLTDINDNAPEFASVINSASI 59
++T LD E IA + + HV+D P S + + +TD+NDN P F + +
Sbjct: 1833 IRTIANLDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETIL 1892
Query: 60 LENAEIG 66
L +G
Sbjct: 1893 LLPTYVG 1899
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR LD E + TL D P+ L+ + ++D+NDN P F +I + + E A
Sbjct: 2348 TARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELA 2407
Query: 64 EIGSLST 70
G T
Sbjct: 2408 PRGHFVT 2414
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASIL 60
+ T + LD E +T + D + + +L+++ +TDINDNAP FA + ++
Sbjct: 2875 ISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEVYRGNVK 2934
Query: 61 ENAEIGSLSTVNAT 74
E+ G + V +T
Sbjct: 2935 ESDPPGEVVAVLST 2948
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLT--DINDNAPEF 50
LDRE+ + Y ++ D+ P SL T+T+T DINDN P F
Sbjct: 3193 LDREQQSSYNISVRATDQ-SPGQSLSSLTTVTITVLDINDNPPVF 3236
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LDRE + Y L + DR + + + D+NDNAP + I ++EN+
Sbjct: 1106 LDRETMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENS 1161
Score = 32.0 bits (71), Expect = 0.99, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
TAR L+ K Y L ++ D A +T+++ D ND+ PEF + A + E+
Sbjct: 431 TARPLNTVKKEVYKLEVTNKEGDLKAQ-----VTISIEDANDHTPEFQQPLYDAYVNESV 485
Query: 64 EIG-SLSTVNAT 74
+G S+ TV+A+
Sbjct: 486 PVGTSVLTVSAS 497
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T + LD E+ + Y L +Q + + + + + D NDNAP F S S+ E
Sbjct: 1723 ITTQKALDYERTSSYQLI--IQATNMAGMASNATVNIQIVDENDNAPVFLFSQYSGSLSE 1780
Query: 62 NAEIGSL 68
A I S+
Sbjct: 1781 AAPINSI 1787
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50
T+R LDRE+ A + L V D + + + + D NDN P+F
Sbjct: 1208 TSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQF 1254
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 5 ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS----VINSASIL 60
A+ LD E+ + Y ++ V D A V+ + + + D NDN PEF+ V S +L
Sbjct: 1418 AKPLDAEQRSIYNMSVEVTDGTNVA---VTQVFIKVLDNNDNGPEFSQPNYDVTISEDVL 1474
Query: 61 ENAEI 65
+ EI
Sbjct: 1475 PDTEI 1479
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE---- 61
R LDRE+ Y LN D + +++ ++++D+NDN+P V +A + E
Sbjct: 2988 RPLDREEQDIYFLNITATD---GLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPS 3044
Query: 62 NAEIGSLSTVNATIGVN 78
N I +S +A IG N
Sbjct: 3045 NKIILKVSAKDADIGSN 3061
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 31/59 (52%)
Query: 9 DREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGS 67
D + ++ L+ V D+ P +++ +++T +++ P+F A + EN +IG+
Sbjct: 1630 DMTTMGQFVLSIKVTDQGSPPMSATAIVRISVTMSDNSHPKFIHKDYQAEVNENVDIGT 1688
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 4 TARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
T LDRE ++ V+ D + + + D NDNAP+F +V AS+ +
Sbjct: 2554 TTERLDRENPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADV 2613
Query: 64 EIGSLST 70
G L T
Sbjct: 2614 GRGHLVT 2620
>sp|O60330|PCDGC_HUMAN Protocadherin gamma-A12 OS=Homo sapiens GN=PCDHGA12 PE=2 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL R LDRE+ A + L D P + I + + D NDNAP FA AS+
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 61 ENAEIGS-LSTVNATI---GVN-RCGHTFRGKDLRCYNLFK 96
EN +G+ L VNAT GVN ++FR D + +FK
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFK 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIG- 66
LDRE++ Y + DR P + I+L + D NDN P F SA I EN G
Sbjct: 410 LDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGV 469
Query: 67 SLSTV---------NATIGVNRCGHTFRGKDLRCY 92
SL +V NA I + +T +G L Y
Sbjct: 470 SLVSVTAHDPDCEENAQITYSLAENTIQGASLSSY 504
Score = 36.6 bits (83), Expect = 0.041, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
+ T LD E+ Y + VQ D + + + +T+ D+NDNAPE ++S+ E
Sbjct: 301 ISTIGELDHEESGFYQM--EVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPE 358
Query: 62 NAEIGSL 68
N+ G+L
Sbjct: 359 NSPRGTL 365
>sp|Q9Y5E1|PCDB9_HUMAN Protocadherin beta-9 OS=Homo sapiens GN=PCDHB9 PE=2 SV=2
Length = 797
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+ +L D P+ S I + + D+NDNAP+FA +
Sbjct: 193 ELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAP 252
Query: 61 ENAEIGSL----STVNATIGVN 78
EN+ +GSL S +A GVN
Sbjct: 253 ENSPVGSLIVKVSAGDADSGVN 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T LDRE A Y + V D P + ITL ++D+NDNAP F + + E
Sbjct: 403 LMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALHIGSVSATDRDSGTN 483
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 517 RSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSP 559
>sp|Q9Y5E2|PCDB7_HUMAN Protocadherin beta-7 OS=Homo sapiens GN=PCDHB7 PE=2 SV=1
Length = 793
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASIL 60
EL + LDRE+I ++L D P +L+ + + D+NDNAP+F + +
Sbjct: 193 ELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKVQVP 252
Query: 61 ENAEIGSL 68
EN+ +GS+
Sbjct: 253 ENSPVGSM 260
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILE 61
L T + LDRE+ Y + V D P + IT+ ++D+NDNAP F + + E
Sbjct: 403 LVTEKPLDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 62 N----AEIGSLSTVNATIGVN 78
N IGS+S + G N
Sbjct: 463 NNSPALPIGSVSATDRDSGTN 483
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 8 LDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENA 63
LD E I YTL +D + +C + + +TDINDN PE ++ I EN+
Sbjct: 307 LDYEAIQTYTLTIQAKDGGGLSGKCT--VVVDVTDINDNRPELLLSSLTSPIAENS 360
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48
R LD E + + DR PA +L+ + + D NDN+P
Sbjct: 517 RSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSP 559
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,853,060
Number of Sequences: 539616
Number of extensions: 985010
Number of successful extensions: 3765
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2027
Number of HSP's gapped (non-prelim): 1637
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)