Query psy10256
Match_columns 96
No_of_seqs 183 out of 1176
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 21:50:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ppe_A Vascular endothelial ca 99.9 2.4E-25 8E-30 140.9 12.1 94 1-94 54-155 (203)
2 2a4e_A Cadherin-11; dimer, cal 99.9 4.4E-25 1.5E-29 140.8 12.7 94 1-94 57-158 (215)
3 2qvi_A Cadherin-2; beta barrel 99.9 2E-25 6.9E-30 142.3 11.0 94 1-94 59-164 (215)
4 3qrb_A Cadherin-1; cell adhesi 99.9 3.7E-25 1.3E-29 140.8 11.9 94 1-94 59-165 (213)
5 3k5r_A Cadherin 13; mouse, str 99.9 1.7E-25 5.9E-30 142.7 10.0 94 1-94 59-164 (218)
6 3lnd_A CDH6 protein, cadherin 99.9 3.1E-25 1.1E-29 140.6 7.4 94 1-94 56-157 (207)
7 3mvs_A Cadherin-23, otocadheri 99.9 8E-24 2.7E-28 134.4 12.6 91 1-94 63-157 (210)
8 2a62_A Cadherin-8; extracellul 99.9 3.6E-23 1.2E-27 138.6 10.0 94 1-94 163-265 (322)
9 2x2u_A Proto-oncogene tyrosine 99.9 9.5E-25 3.3E-29 141.6 0.7 94 1-94 66-188 (246)
10 3q2w_A Cadherin-2; cell adhesi 99.9 1.5E-22 5.2E-27 143.5 11.4 94 1-94 59-164 (559)
11 2a62_A Cadherin-8; extracellul 99.9 4.8E-23 1.6E-27 138.0 7.6 94 1-94 56-157 (322)
12 1l3w_A EP-cadherin, C-cadherin 99.9 4.1E-22 1.4E-26 141.0 11.5 94 1-94 65-171 (546)
13 3q2v_A Cadherin-1; cell adhesi 99.9 9.3E-22 3.2E-26 139.3 10.4 94 1-94 59-165 (550)
14 1q55_A EP-cadherin, C-cadherin 99.9 2E-21 6.8E-26 143.5 11.5 94 1-94 214-320 (880)
15 3ubh_A Neural-cadherin; cell a 99.8 2.1E-20 7.3E-25 128.7 12.8 91 1-94 273-371 (419)
16 3ubf_A Neural-cadherin; cell a 99.8 1.7E-20 5.7E-25 125.2 10.9 92 1-94 51-156 (316)
17 1l3w_A EP-cadherin, C-cadherin 99.8 4.5E-21 1.5E-25 135.7 8.0 92 2-94 178-277 (546)
18 3ubh_A Neural-cadherin; cell a 99.8 1.7E-19 5.7E-24 124.3 13.3 92 1-94 56-161 (419)
19 4apx_B Protocadherin-15, otoca 99.8 4.1E-20 1.4E-24 119.7 9.7 84 5-88 80-174 (242)
20 3q2v_A Cadherin-1; cell adhesi 99.8 1.8E-19 6.2E-24 127.6 12.8 92 2-94 282-381 (550)
21 1q55_A EP-cadherin, C-cadherin 99.8 3.1E-20 1.1E-24 137.2 8.0 92 2-94 327-426 (880)
22 3ubf_A Neural-cadherin; cell a 99.8 2E-19 6.9E-24 120.0 10.9 90 1-94 162-262 (316)
23 3q2w_A Cadherin-2; cell adhesi 99.8 5.3E-19 1.8E-23 125.4 11.4 92 2-94 285-387 (559)
24 2ee0_A Protocadherin-9; Ca dom 99.7 3.5E-17 1.2E-21 95.1 2.8 57 38-94 2-67 (114)
25 2yqg_A Desmoglein-2, HDGC; cad 99.6 1.9E-16 6.6E-21 93.1 5.5 52 1-52 71-122 (123)
26 1ncg_A N-cadherin; cell adhesi 99.6 2.2E-16 7.4E-21 91.2 5.2 50 1-50 61-110 (110)
27 2yst_A Protocadherin-7; BH-PCD 99.6 1.6E-16 5.5E-21 92.8 3.0 57 38-94 2-66 (119)
28 2yst_A Protocadherin-7; BH-PCD 99.5 3.5E-14 1.2E-18 82.8 6.4 48 1-48 72-119 (119)
29 2x2u_A Proto-oncogene tyrosine 99.5 1.4E-13 4.9E-18 89.0 7.0 51 1-51 194-245 (246)
30 1wyj_A Protocadherin beta 14; 99.5 9.7E-15 3.3E-19 86.0 0.8 55 1-58 65-123 (125)
31 2a4e_A Cadherin-11; dimer, cal 99.3 6E-12 2.1E-16 80.0 6.6 48 2-49 165-215 (215)
32 2omz_B Epithelial-cadherin; le 99.2 5.3E-11 1.8E-15 68.0 5.5 43 1-43 63-105 (105)
33 3mvs_A Cadherin-23, otocadheri 99.2 1.3E-10 4.5E-15 73.4 7.8 47 1-47 163-210 (210)
34 3k6f_A T-cadherin; cell adhesi 99.1 1.8E-10 6.1E-15 65.2 6.4 42 1-42 59-100 (100)
35 3k6i_A T-cadherin; cell adhesi 99.1 2.3E-10 7.7E-15 64.6 6.7 42 1-42 58-99 (99)
36 3k6d_A T-cadherin; cell adhesi 99.1 2.8E-10 9.7E-15 64.3 6.5 42 1-42 58-99 (99)
37 1zvn_A Mn-cadherin; strand dim 99.1 2.5E-10 8.4E-15 64.6 5.8 42 1-42 57-99 (99)
38 1zxk_A Cadherin-8; strand dime 99.1 3.2E-10 1.1E-14 64.0 5.5 42 1-42 56-98 (98)
39 2ee0_A Protocadherin-9; Ca dom 99.0 1E-09 3.5E-14 63.3 6.6 42 1-44 73-114 (114)
40 3ppe_A Vascular endothelial ca 98.6 1.7E-07 5.8E-12 58.8 6.2 41 2-42 161-203 (203)
41 3qrb_A Cadherin-1; cell adhesi 98.6 1.4E-07 4.7E-12 59.6 5.7 41 2-42 172-213 (213)
42 2yqg_A Desmoglein-2, HDGC; cad 98.5 5.9E-09 2E-13 60.9 -1.4 52 43-94 5-65 (123)
43 3lnd_A CDH6 protein, cadherin 98.5 2.2E-07 7.6E-12 58.4 5.7 41 2-42 164-207 (207)
44 1wuz_A Pcdha4 protein, CNR-EC1 98.4 4.3E-07 1.5E-11 51.4 5.0 41 1-46 57-103 (103)
45 2qvi_A Cadherin-2; beta barrel 98.4 3.3E-07 1.1E-11 58.0 4.4 41 2-42 171-215 (215)
46 3k5r_A Cadherin 13; mouse, str 98.4 1.1E-06 3.8E-11 55.5 6.7 37 6-42 178-218 (218)
47 4apx_B Protocadherin-15, otoca 98.4 2.1E-06 7.2E-11 55.3 7.6 43 1-43 193-238 (242)
48 1zxk_A Cadherin-8; strand dime 98.2 1.5E-06 5.1E-11 48.8 3.8 39 55-94 5-50 (98)
49 1zvn_A Mn-cadherin; strand dim 98.1 2.7E-06 9.3E-11 47.8 4.1 40 54-94 5-51 (99)
50 1ncg_A N-cadherin; cell adhesi 98.0 3.6E-06 1.2E-10 48.0 2.3 41 54-94 6-55 (110)
51 2omz_B Epithelial-cadherin; le 97.3 5.8E-05 2E-09 42.6 0.7 41 55-95 9-58 (105)
52 3k6d_A T-cadherin; cell adhesi 97.2 0.00026 9E-09 39.4 3.3 36 55-94 5-52 (99)
53 3k6f_A T-cadherin; cell adhesi 96.8 0.0011 3.7E-08 36.9 2.9 36 55-94 6-53 (100)
54 3k6i_A T-cadherin; cell adhesi 96.7 0.0021 7.3E-08 35.6 4.0 35 56-94 6-52 (99)
55 1wyj_A Protocadherin beta 14; 96.7 0.00041 1.4E-08 40.3 0.6 41 53-94 11-59 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 96.2 0.00028 9.5E-09 39.6 -1.9 42 53-94 3-51 (103)
57 2kpn_A Bacillolysin; solution 88.6 2 6.9E-05 23.9 6.3 45 2-48 47-91 (103)
58 2yrl_A KIAA1837 protein; PKD d 87.6 2.3 7.8E-05 23.3 5.8 32 12-45 67-98 (102)
59 2yhg_A SDE_182CT, cellulose-bi 83.4 4.9 0.00017 28.1 6.6 30 11-40 407-436 (437)
60 3rb5_A Na/Ca exchange protein; 76.2 14 0.00047 24.3 8.1 72 10-85 87-161 (298)
61 2y72_A Collagenase, collagenas 72.3 8.5 0.00029 20.1 5.4 29 11-41 56-84 (85)
62 2lv4_A Putative outer membrane 42.7 9.6 0.00033 22.1 1.1 17 32-48 64-80 (146)
63 3ead_A Na/Ca exchange protein; 40.3 35 0.0012 19.4 3.4 6 8-13 52-57 (137)
64 2c4x_A Endoglucanase, ctcel9D- 30.8 1.1E+02 0.0037 19.7 5.3 32 10-43 65-96 (260)
65 3us9_A Sodium/calcium exchange 29.5 1.2E+02 0.0041 19.8 8.4 33 35-70 129-161 (295)
66 3pe9_A Fibronectin(III)-like m 25.3 87 0.003 16.8 4.9 29 13-42 60-88 (98)
67 2w1n_A O-GLCNACASE NAGJ; hexos 22.9 1.6E+02 0.0053 18.9 4.7 25 13-38 210-234 (238)
68 3pdd_A Glycoside hydrolase, fa 20.1 1.5E+02 0.0052 17.7 5.0 35 13-50 60-94 (190)
No 1
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.93 E-value=2.4e-25 Score=140.92 Aligned_cols=94 Identities=31% Similarity=0.379 Sum_probs=85.9
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCC-CceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCC-
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNAT- 74 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~-~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D- 74 (96)
+|++.++||||..+.|.|.|.|.|.+.+ ++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|
T Consensus 54 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 133 (203)
T 3ppe_A 54 DIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADD 133 (203)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC
T ss_pred EEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCC
Confidence 3788899999999999999999999876 577788999999999999999999999999999999999998 9999
Q ss_pred --CCCCceEEEEEcCCCceEec
Q psy10256 75 --IGVNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 75 --~~~n~~i~y~i~~~~~~f~i 94 (96)
.|.|+++.|+|.+....|.|
T Consensus 134 ~~~g~n~~i~Y~i~~~~~~F~I 155 (203)
T 3ppe_A 134 PTVAGHATVTYQIIKGNEYFTV 155 (203)
T ss_dssp TTSSSTTCEEEEEEESTTTEEE
T ss_pred cCCCCceEEEEEEeCCCCcEEE
Confidence 47899999999877677776
No 2
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.93 E-value=4.4e-25 Score=140.82 Aligned_cols=94 Identities=30% Similarity=0.363 Sum_probs=86.1
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC-CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATI 75 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~ 75 (96)
+|++.++||||..+.|.|.|.|.|.+. +++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.
T Consensus 57 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~ 136 (215)
T 2a4e_A 57 NIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADD 136 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSC
T ss_pred EEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCC
Confidence 378899999999999999999999875 5678889999999999999999999999999999999999998 99997
Q ss_pred ---CCCceEEEEEcCCCceEec
Q psy10256 76 ---GVNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 76 ---~~n~~i~y~i~~~~~~f~i 94 (96)
|.|+++.|+|.+....|.|
T Consensus 137 ~~~G~n~~i~Y~i~~~~~~F~I 158 (215)
T 2a4e_A 137 PTYGNSAKLVYSILEGQPYFSV 158 (215)
T ss_dssp TTTCSSSCCEEEEEESTTTEEE
T ss_pred CCCCCceEEEEEEeCCCCcEEE
Confidence 8899999999776677876
No 3
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.93 E-value=2e-25 Score=142.34 Aligned_cols=94 Identities=28% Similarity=0.353 Sum_probs=86.3
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCC-
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATI- 75 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~- 75 (96)
+|++.++||||..+.|.|.|.|.|.+++++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~ 138 (215)
T 2qvi_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDP 138 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCT
T ss_pred EEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 3788999999999999999999999998889999999999999999999999999999999999999998 89998
Q ss_pred -CCCceEEEEEcCC------CceEec
Q psy10256 76 -GVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 76 -~~n~~i~y~i~~~------~~~f~i 94 (96)
|.|+++.|+|.+. ...|.|
T Consensus 139 ~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 139 NALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 7899999999643 366776
No 4
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.93 E-value=3.7e-25 Score=140.76 Aligned_cols=94 Identities=31% Similarity=0.320 Sum_probs=86.0
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||....|.|.+.|.|.+++++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~ 138 (213)
T 3qrb_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDD 138 (213)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCT
T ss_pred EEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCC
Confidence 3788999999999999999999999988888889999999999999999999999999999999999998 999999
Q ss_pred ---CCceEEEEEcC------CCceEec
Q psy10256 77 ---VNRCGHTFRGK------DLRCYNL 94 (96)
Q Consensus 77 ---~n~~i~y~i~~------~~~~f~i 94 (96)
.|+++.|+|.+ ..+.|.|
T Consensus 139 ~~~~n~~i~Y~i~~~~~~~~~~~~F~I 165 (213)
T 3qrb_A 139 VNTYNAAIAYTIVSQDPELPHKNMFTV 165 (213)
T ss_dssp TTSSTTCCEEEEEEEESCCSCSCSEEE
T ss_pred CCCcCcEEEEEEccCCCCCCcCCeEEE
Confidence 89999999953 2356776
No 5
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.93 E-value=1.7e-25 Score=142.72 Aligned_cols=94 Identities=22% Similarity=0.252 Sum_probs=85.8
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCC-
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATI- 75 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~- 75 (96)
+|++.++||||....|.|+|.|.|.+++++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~ 138 (218)
T 3k5r_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDP 138 (218)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSS
T ss_pred EEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCC
Confidence 3788999999999999999999999888889999999999999999999999999999999999999998 89999
Q ss_pred -CCCceEEEEEcCCC------ceEec
Q psy10256 76 -GVNRCGHTFRGKDL------RCYNL 94 (96)
Q Consensus 76 -~~n~~i~y~i~~~~------~~f~i 94 (96)
|.|+++.|+|.+.. +.|.|
T Consensus 139 ~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (218)
T 3k5r_A 139 ATDNALLRYNIRQQTPDKPSPNMFYI 164 (218)
T ss_dssp CGGGGCEEEEEEEEESCCSCSCSEEE
T ss_pred CCCCcEEEEEEecCCCCCCcCCEEEE
Confidence 67999999996432 45776
No 6
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.92 E-value=3.1e-25 Score=140.63 Aligned_cols=94 Identities=24% Similarity=0.338 Sum_probs=82.0
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC-CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATI 75 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~ 75 (96)
+|++.++||||+...|.|.+.|.|.+. +++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 135 (207)
T 3lnd_A 56 DIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADD 135 (207)
T ss_dssp EEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSC
T ss_pred EEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 378889999999999999999999874 5677888999999999999999999999999999999999998 99998
Q ss_pred ---CCCceEEEEEcCCCceEec
Q psy10256 76 ---GVNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 76 ---~~n~~i~y~i~~~~~~f~i 94 (96)
|.|+++.|+|.+....|.|
T Consensus 136 ~~~g~n~~i~Y~i~~~~~~F~I 157 (207)
T 3lnd_A 136 PTYGNSAKVVYSILQGQPYFSV 157 (207)
T ss_dssp TTSSSTTCCEEEEEESGGGEEE
T ss_pred CCCCCCcEEEEEEcCCCCCEEE
Confidence 8899999999877677776
No 7
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.91 E-value=8e-24 Score=134.40 Aligned_cols=91 Identities=22% Similarity=0.284 Sum_probs=83.6
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||....|.|.+.|.|.++ ..++.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.|
T Consensus 63 ~i~~~~~LD~E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g 139 (210)
T 3mvs_A 63 VVWLRQPLDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLG 139 (210)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSG
T ss_pred EEEECCccCCcccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCC
Confidence 378899999999999999999999764 3567899999999999999999999999999999999998 999999
Q ss_pred CCceEEEEEcCCCceEec
Q psy10256 77 VNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 77 ~n~~i~y~i~~~~~~f~i 94 (96)
.|+.+.|+|.+....|.|
T Consensus 140 ~n~~v~Y~i~~~~~~F~I 157 (210)
T 3mvs_A 140 AGGSVLYSFQPPSPFFAI 157 (210)
T ss_dssp GGGCEEEEESSCCSSEEE
T ss_pred CCceEEEEEeCCCCCEEE
Confidence 999999999887778876
No 8
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.89 E-value=3.6e-23 Score=138.60 Aligned_cols=94 Identities=27% Similarity=0.349 Sum_probs=84.3
Q ss_pred CEEeC-CCCCccCCCEEEEEEEEEeCCCCC--ceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcC
Q psy10256 1 ELKTA-RGLDREKIARYTLNAHVQDRDQPA--WECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNA 73 (96)
Q Consensus 1 ~i~~~-~~LDrE~~~~~~l~v~a~d~~~~~--~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~ 73 (96)
+|++. ++||||....|.|.|.|+|.+.++ +++.+.|+|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+
T Consensus 163 ~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 242 (322)
T 2a62_A 163 IIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQ 242 (322)
T ss_dssp CEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCS
T ss_pred EEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeC
Confidence 36677 899999999999999999998763 78899999999999999999999999999999999999998 999
Q ss_pred CCCCCceEEEEEcC--CCceEec
Q psy10256 74 TIGVNRCGHTFRGK--DLRCYNL 94 (96)
Q Consensus 74 D~~~n~~i~y~i~~--~~~~f~i 94 (96)
|.|.|+++.|+|.+ ..+.|.|
T Consensus 243 D~g~n~~i~Y~i~~g~~~~~F~I 265 (322)
T 2a62_A 243 DIGENAQSSYDIIDGDGTALFEI 265 (322)
T ss_dssp SCGGGTCCEEEEC---CCSSBCC
T ss_pred CCCCCceEEEEEECCCCCCcEEE
Confidence 99999999999954 3466765
No 9
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.89 E-value=9.5e-25 Score=141.63 Aligned_cols=94 Identities=14% Similarity=0.039 Sum_probs=82.1
Q ss_pred CEEeCCCCCccCCCEE------------EEEEEEEeCCCC--CceEEEEEEEEEecCCCCCCe----------EeccceE
Q psy10256 1 ELKTARGLDREKIARY------------TLNAHVQDRDQP--AWECVSLITLTLTDINDNAPE----------FASVINS 56 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~------------~l~v~a~d~~~~--~~~~~~~v~i~v~d~Ndn~P~----------f~~~~~~ 56 (96)
+|++.++||||..+.| .|.|.|+|.+.+ .+++++.|.|+|.|+|||+|. |....|.
T Consensus 66 ~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~ 145 (246)
T 2x2u_A 66 LLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPS 145 (246)
T ss_dssp EEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCC
T ss_pred EEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEE
Confidence 3788999999999999 999999999876 567788999999999999999 9999999
Q ss_pred EEEecCCCCCeeEE----EcCCCCCCceEEEEEcCC-CceEec
Q psy10256 57 ASILENAEIGSLST----VNATIGVNRCGHTFRGKD-LRCYNL 94 (96)
Q Consensus 57 ~~v~E~~~~g~~v~----~D~D~~~n~~i~y~i~~~-~~~f~i 94 (96)
+.|+|+.++|+.|+ +|+|.|.|++|.|+|.+. ...|.|
T Consensus 146 ~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~I 188 (246)
T 2x2u_A 146 FRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRS 188 (246)
T ss_dssp EEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEEC
T ss_pred EEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEE
Confidence 99999999999998 899999999999999766 577876
No 10
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.89 E-value=1.5e-22 Score=143.49 Aligned_cols=94 Identities=28% Similarity=0.350 Sum_probs=85.4
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||+...|.|.+.|.|.+++.+++.+.+.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g 138 (559)
T 3q2w_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDP 138 (559)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCT
T ss_pred EEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCC
Confidence 4788999999999999999999999988888899999999999999999999999999999999999998 999998
Q ss_pred --CCceEEEEEcCCC------ceEec
Q psy10256 77 --VNRCGHTFRGKDL------RCYNL 94 (96)
Q Consensus 77 --~n~~i~y~i~~~~------~~f~i 94 (96)
.|+++.|+|.+.. +.|.|
T Consensus 139 ~~~n~~v~Ysi~~~~~~~~~~~~F~I 164 (559)
T 3q2w_A 139 NALNGMLRYRILSQAPSTPSPNMFTI 164 (559)
T ss_dssp TSGGGCCEEEEEEEESCCSCTTCEEE
T ss_pred CCCceEEEEEEecCCCCCCCcceEEE
Confidence 6999999995332 45765
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.88 E-value=4.8e-23 Score=138.03 Aligned_cols=94 Identities=29% Similarity=0.322 Sum_probs=85.1
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC-CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATI 75 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~ 75 (96)
+|++.++||||+...|.|.+.|.|.++ +++++.+.+.|+|.|+|||+|.|....|.+.|+|+.++|+.|+ +|+|.
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 135 (322)
T 2a62_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADD 135 (322)
T ss_dssp EEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSC
T ss_pred EEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 378899999999999999999999875 3577888999999999999999999999999999999999998 89996
Q ss_pred ---CCCceEEEEEcCCCceEec
Q psy10256 76 ---GVNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 76 ---~~n~~i~y~i~~~~~~f~i 94 (96)
|.|+++.|+|.+....|.|
T Consensus 136 ~~~G~n~~i~Y~i~~~~~~F~I 157 (322)
T 2a62_A 136 PVYGNSAKLVYSILEGQPYFSI 157 (322)
T ss_dssp SSSTTSSCEEEEEEECTTTEEE
T ss_pred CCCCccEEEEEEEccCCCCEEE
Confidence 7899999999776677876
No 12
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.88 E-value=4.1e-22 Score=141.02 Aligned_cols=94 Identities=23% Similarity=0.280 Sum_probs=85.4
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||+...|.|.+.|.|.+++.+++.+.+.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|
T Consensus 65 ~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g 144 (546)
T 1l3w_A 65 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDN 144 (546)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCC
T ss_pred EEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCC
Confidence 3788999999999999999999999888777888999999999999999999999999999999999998 999999
Q ss_pred ---CCceEEEEEcCCC------ceEec
Q psy10256 77 ---VNRCGHTFRGKDL------RCYNL 94 (96)
Q Consensus 77 ---~n~~i~y~i~~~~------~~f~i 94 (96)
.|+.+.|+|.+.. +.|.|
T Consensus 145 ~~~~n~~v~Ysi~~~~~~~~~~~~F~I 171 (546)
T 1l3w_A 145 IDSLNGVLSYSILKQDPEEPIPNLFTI 171 (546)
T ss_dssp SSSSTTCCEEEEEEESSCCSCSCSEEE
T ss_pred CCCCCCEEEEEEeCCCCCcccCCcEEE
Confidence 6999999996432 56776
No 13
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.87 E-value=9.3e-22 Score=139.25 Aligned_cols=94 Identities=31% Similarity=0.320 Sum_probs=85.1
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||+...|.|.+.|.|.+++.++..+.+.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g 138 (550)
T 3q2v_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDD 138 (550)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCT
T ss_pred EEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 3788999999999999999999999887777888999999999999999999999999999999999998 999998
Q ss_pred ---CCceEEEEEcC------CCceEec
Q psy10256 77 ---VNRCGHTFRGK------DLRCYNL 94 (96)
Q Consensus 77 ---~n~~i~y~i~~------~~~~f~i 94 (96)
.|+.+.|+|.+ ..+.|.|
T Consensus 139 ~~~~N~~i~Ysi~~~~~~~~~~~~F~i 165 (550)
T 3q2v_A 139 VNTYNAAIAYTIVSQDPELPHKNMFTV 165 (550)
T ss_dssp TTCGGGCCEEEEEEEESCCSSSCSEEE
T ss_pred CCCcceEEEEEEecCCCCCCcCCceEE
Confidence 79999999953 2356766
No 14
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.86 E-value=2e-21 Score=143.50 Aligned_cols=94 Identities=23% Similarity=0.286 Sum_probs=85.4
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIG 76 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~ 76 (96)
+|++.++||||+...|.|++.|.|.+++.+++.+.++|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|
T Consensus 214 ~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g 293 (880)
T 1q55_A 214 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDN 293 (880)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCC
T ss_pred EEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCC
Confidence 3788999999999999999999999888778889999999999999999999999999999999999998 999999
Q ss_pred ---CCceEEEEEcCC------CceEec
Q psy10256 77 ---VNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 77 ---~n~~i~y~i~~~------~~~f~i 94 (96)
.|+.+.|+|.+. .+.|.|
T Consensus 294 ~~~~N~~v~Ysi~~~~~~~~~~~~F~I 320 (880)
T 1q55_A 294 IDSLNGVLSYSILKQDPEEPIPNLFTI 320 (880)
T ss_dssp SSSSTTCCEEEEEEESSCCSCSCSEEE
T ss_pred CCCcCcEEEEEEcCCCCCcccCCeEEE
Confidence 699999999543 256776
No 15
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.85 E-value=2.1e-20 Score=128.69 Aligned_cols=91 Identities=24% Similarity=0.341 Sum_probs=80.6
Q ss_pred CEEeCCCCCccCCC---EEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEE-EEecCCCCCeeEE----Ec
Q psy10256 1 ELKTARGLDREKIA---RYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSA-SILENAEIGSLST----VN 72 (96)
Q Consensus 1 ~i~~~~~LDrE~~~---~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~-~v~E~~~~g~~v~----~D 72 (96)
+|++.++||||... .|.|+|.|+|.+ +++++.+.|.|+|.|+|||+|.|....|.. .|+|+.++|+.|+ +|
T Consensus 273 ~i~~~~~LD~E~~~~~~~y~l~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D 351 (419)
T 3ubh_A 273 IVKLAKELDFEDLRQPHVYSLIVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMD 351 (419)
T ss_dssp EEEECSCCCTTCTTSCSEEEEEEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEEC
T ss_pred EEEECcccCccccccccEEEEEEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEe
Confidence 37789999999876 799999999754 367888999999999999999999999987 7999999999998 99
Q ss_pred CCCCCCceEEEEEcCCCceEec
Q psy10256 73 ATIGVNRCGHTFRGKDLRCYNL 94 (96)
Q Consensus 73 ~D~~~n~~i~y~i~~~~~~f~i 94 (96)
+|.|.|+.+.|+|.++ .|.|
T Consensus 352 ~D~g~n~~v~Y~i~~~--~F~I 371 (419)
T 3ubh_A 352 SDSGSNAEIEYLVSDD--HFAV 371 (419)
T ss_dssp SSCGGGGCEEEEESCT--TEEE
T ss_pred CCCCCCCEEEEEEcCC--cEEE
Confidence 9999999999999753 5665
No 16
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.84 E-value=1.7e-20 Score=125.20 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=75.3
Q ss_pred CEEeCCCCCccCC-----CEEEEEEEEEeCCCC-CceEEEEEEEEEecCCCCCCeEeccc--eEEEEecCCCCCeeEE--
Q psy10256 1 ELKTARGLDREKI-----ARYTLNAHVQDRDQP-AWECVSLITLTLTDINDNAPEFASVI--NSASILENAEIGSLST-- 70 (96)
Q Consensus 1 ~i~~~~~LDrE~~-----~~~~l~v~a~d~~~~-~~~~~~~v~i~v~d~Ndn~P~f~~~~--~~~~v~E~~~~g~~v~-- 70 (96)
+|++.++||||.. ..|.+.+.|.|.+.+ ++++.+.++|+|.|+|||+|.|.... |.+.|+|+.++|+.|+
T Consensus 51 ~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v 130 (316)
T 3ubf_A 51 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTL 130 (316)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEEC
T ss_pred EEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEE
Confidence 3788999999994 468888888888765 56889999999999999999999886 8999999999999998
Q ss_pred --EcCCCCCCceEEEEEc--CCCceEec
Q psy10256 71 --VNATIGVNRCGHTFRG--KDLRCYNL 94 (96)
Q Consensus 71 --~D~D~~~n~~i~y~i~--~~~~~f~i 94 (96)
+|+|.|.| +.|+|. +..+.|.|
T Consensus 131 ~A~D~D~g~n--i~Y~i~~~~~~~~F~I 156 (316)
T 3ubf_A 131 QARDPDTDHN--IHYFIVRDRTGGRFEV 156 (316)
T ss_dssp CEECSSTTCC--EEEEEEEEESSSCEEE
T ss_pred EEECCCCCCc--eEEEEEeCCCCCEEEE
Confidence 99999988 899995 34577876
No 17
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.84 E-value=4.5e-21 Score=135.71 Aligned_cols=92 Identities=27% Similarity=0.307 Sum_probs=83.8
Q ss_pred EEe-CCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCC--
Q psy10256 2 LKT-ARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNAT-- 74 (96)
Q Consensus 2 i~~-~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D-- 74 (96)
|++ .++||||+...|.|.|.|+|.+++++++.+.+.|+|.|+|||+|.|....|.+.|+|+ ++|+.|+ +|+|
T Consensus 178 i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~ 256 (546)
T 1l3w_A 178 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMP 256 (546)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCT
T ss_pred EEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCC
Confidence 566 4789999999999999999998888999999999999999999999999999999999 9999998 8999
Q ss_pred CCCCceEEEEEcC-CCceEec
Q psy10256 75 IGVNRCGHTFRGK-DLRCYNL 94 (96)
Q Consensus 75 ~~~n~~i~y~i~~-~~~~f~i 94 (96)
.+.|+++.|+|.+ ..+.|.|
T Consensus 257 ~g~n~~v~y~i~~~~~~~F~I 277 (546)
T 1l3w_A 257 GTPAWQAVYKIRVNEGGFFNI 277 (546)
T ss_dssp TSTTSCEECCBSCCTTSCEEE
T ss_pred CCCCcEEEEEEEeCCCceEEE
Confidence 7789999999975 4467876
No 18
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.83 E-value=1.7e-19 Score=124.26 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=78.4
Q ss_pred CEEeCCCCCccCC---CEEEEEEEEEeCCCC---CceEEEEEEEEEecCCCCCCeEeccc--eEEEEecCCCCCeeEE--
Q psy10256 1 ELKTARGLDREKI---ARYTLNAHVQDRDQP---AWECVSLITLTLTDINDNAPEFASVI--NSASILENAEIGSLST-- 70 (96)
Q Consensus 1 ~i~~~~~LDrE~~---~~~~l~v~a~d~~~~---~~~~~~~v~i~v~d~Ndn~P~f~~~~--~~~~v~E~~~~g~~v~-- 70 (96)
+|++.++||||+. ..|.+.|.|+|.+.+ ++++.+.|+|+|.|+|||+|.|.... |...|+|+.++|+.|+
T Consensus 56 ~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v 135 (419)
T 3ubh_A 56 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTL 135 (419)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEEC
T ss_pred EEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEE
Confidence 3778899999998 689999999998754 46778999999999999999999877 7899999999999998
Q ss_pred --EcCCCCCCceEEEEEc--CCCceEec
Q psy10256 71 --VNATIGVNRCGHTFRG--KDLRCYNL 94 (96)
Q Consensus 71 --~D~D~~~n~~i~y~i~--~~~~~f~i 94 (96)
+|+|.|.| +.|+|. +..+.|.|
T Consensus 136 ~A~D~D~g~n--~~y~i~~~~~~~~F~I 161 (419)
T 3ubh_A 136 QARDPDTDHN--IHYFIVRDRTGGRFEV 161 (419)
T ss_dssp CEECSSTTCC--EEEEEEEESSSSCEEE
T ss_pred EEECCCCCce--eEEEEEeCCCCCeEEE
Confidence 99999988 789885 33467776
No 19
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.83 E-value=4.1e-20 Score=119.71 Aligned_cols=84 Identities=18% Similarity=0.091 Sum_probs=70.2
Q ss_pred CCCCCccCCCEEEEEEEEEeCCC--CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE---------EcC
Q psy10256 5 ARGLDREKIARYTLNAHVQDRDQ--PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST---------VNA 73 (96)
Q Consensus 5 ~~~LDrE~~~~~~l~v~a~d~~~--~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~---------~D~ 73 (96)
.+.||||....|.+.+.+.+++. .+..+.+.|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+
T Consensus 80 ~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~ 159 (242)
T 4apx_B 80 GRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDI 159 (242)
T ss_dssp TSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECC
T ss_pred CCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccC
Confidence 47899999887766655555332 2345677899999999999999999999999999999999984 899
Q ss_pred CCCCCceEEEEEcCC
Q psy10256 74 TIGVNRCGHTFRGKD 88 (96)
Q Consensus 74 D~~~n~~i~y~i~~~ 88 (96)
|.|.|++|.|+|...
T Consensus 160 D~g~N~~v~Ysi~~~ 174 (242)
T 4apx_B 160 DDGPNGQIEYVIQYN 174 (242)
T ss_dssp SSGGGGCEEEEEECC
T ss_pred CCCcCCceEEEEecC
Confidence 999999999999643
No 20
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.82 E-value=1.8e-19 Score=127.55 Aligned_cols=92 Identities=23% Similarity=0.306 Sum_probs=83.5
Q ss_pred EEeCCCCCccCCCEEEEEEEEEeCCC---CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCC
Q psy10256 2 LKTARGLDREKIARYTLNAHVQDRDQ---PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNAT 74 (96)
Q Consensus 2 i~~~~~LDrE~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D 74 (96)
|++.++||||....|.|.|.|.|.+. +.+++.+.|.|+|.|+|| +|.|....|.+.|+|+.++|+.|+ +|+|
T Consensus 282 i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D 360 (550)
T 3q2v_A 282 LKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPD 360 (550)
T ss_dssp EEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCC
T ss_pred EEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCC
Confidence 67889999999999999999999874 447889999999999999 999999999999999999999998 9999
Q ss_pred CCCCceEEEEEcCC-CceEec
Q psy10256 75 IGVNRCGHTFRGKD-LRCYNL 94 (96)
Q Consensus 75 ~~~n~~i~y~i~~~-~~~f~i 94 (96)
.|.|+++.|+|.++ .+.|.|
T Consensus 361 ~g~n~~i~y~i~~~~~~~f~i 381 (550)
T 3q2v_A 361 TFMDQKITYRIWRDTANWLEI 381 (550)
T ss_dssp CSTTCCCEEEEEECTTCCEEE
T ss_pred CCCCCCEEEEEecCCCCcEEE
Confidence 99999999999654 466765
No 21
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.81 E-value=3.1e-20 Score=137.16 Aligned_cols=92 Identities=27% Similarity=0.303 Sum_probs=83.7
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCC--
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VNAT-- 74 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D-- 74 (96)
|++. ++||||+...|.|+|.|+|.+++++++++.|.|+|.|+|||+|.|....|.+.|+|+ ++|+.|+ +|+|
T Consensus 327 I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~ 405 (880)
T 1q55_A 327 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMP 405 (880)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCT
T ss_pred EEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCC
Confidence 5564 789999999999999999998888999999999999999999999999999999999 9999998 8999
Q ss_pred CCCCceEEEEEcC-CCceEec
Q psy10256 75 IGVNRCGHTFRGK-DLRCYNL 94 (96)
Q Consensus 75 ~~~n~~i~y~i~~-~~~~f~i 94 (96)
.+.|+++.|+|.+ ..+.|.|
T Consensus 406 ~g~n~~v~Ysi~~~~~~~F~I 426 (880)
T 1q55_A 406 GTPAWQAVYKIRVNEGGFFNI 426 (880)
T ss_dssp TSTTSCEECCBSCCTTSCEEE
T ss_pred CCCCceEEEEEecCCCceEEE
Confidence 6789999999975 3467876
No 22
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.81 E-value=2e-19 Score=119.97 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=77.6
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC----CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----Ec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ----PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----VN 72 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~----~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D 72 (96)
+|++.++||||....|.|.|.|+|.++ +.+++++.++|+|.| |||+|.|....|.+.|+|+.++|+.|+ +|
T Consensus 162 ~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D 240 (316)
T 3ubf_A 162 VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKS 240 (316)
T ss_dssp EEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEEC
T ss_pred EEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEe
Confidence 377889999999999999999999875 346778889999999 999999999999999999999999999 77
Q ss_pred CCCCCCceEEEEEc---CCCceEec
Q psy10256 73 ATIGVNRCGHTFRG---KDLRCYNL 94 (96)
Q Consensus 73 ~D~~~n~~i~y~i~---~~~~~f~i 94 (96)
+| |+.+.|+|. +..+.|.|
T Consensus 241 ~D---n~~i~Y~i~~~~~~~~~F~I 262 (316)
T 3ubf_A 241 FA---DREIRYTLKAQGQGAGTFNI 262 (316)
T ss_dssp TT---CCCEEEEEEEESSCTTTEEE
T ss_pred CC---CCEEEEEEEcCCCCCCeEEE
Confidence 66 889999995 34477876
No 23
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.80 E-value=5.3e-19 Score=125.37 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=82.2
Q ss_pred EEeCCCCCccCCCEEEEEEEEEeCCC------CCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE----E
Q psy10256 2 LKTARGLDREKIARYTLNAHVQDRDQ------PAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST----V 71 (96)
Q Consensus 2 i~~~~~LDrE~~~~~~l~v~a~d~~~------~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~ 71 (96)
|++.++||||....|.|+|.|+|.+. +++++++.|.|+|.|+|| +|.|....|.+.|+|+.++|+.|+ +
T Consensus 285 i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~ 363 (559)
T 3q2w_A 285 VTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQ 363 (559)
T ss_dssp EEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEE
T ss_pred EEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEE
Confidence 67889999999999999999999742 457889999999999999 699999999999999999999998 9
Q ss_pred cCCCCCCceEEEEEcCC-CceEec
Q psy10256 72 NATIGVNRCGHTFRGKD-LRCYNL 94 (96)
Q Consensus 72 D~D~~~n~~i~y~i~~~-~~~f~i 94 (96)
|+|.|.|+++.|+|.++ .+.|.|
T Consensus 364 D~D~g~n~~i~Ysi~~~~~~~f~I 387 (559)
T 3q2w_A 364 DPDRYMQQNIRYTKLSDPANWLKI 387 (559)
T ss_dssp CSCSSSCCCEEEEEEECTTCCEEE
T ss_pred CCCCCCCCceEEEEccCCccceEe
Confidence 99999999999999644 366665
No 24
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=3.5e-17 Score=95.09 Aligned_cols=57 Identities=30% Similarity=0.296 Sum_probs=51.0
Q ss_pred EEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCCCCceEEEEEcC-----CCceEec
Q psy10256 38 LTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIGVNRCGHTFRGK-----DLRCYNL 94 (96)
Q Consensus 38 i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~~n~~i~y~i~~-----~~~~f~i 94 (96)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|.|++|+|+|.+ ..+.|.|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~I 67 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFAL 67 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEE
Confidence 568999999999999999999999999999998 99999999999999965 2356665
No 25
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.9e-16 Score=93.06 Aligned_cols=52 Identities=31% Similarity=0.371 Sum_probs=48.9
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFAS 52 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~ 52 (96)
+|++.++||||..+.|.|+|.|.|.+.+++++.+.|.|+|.|+|||+|.|.+
T Consensus 71 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 71 ELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 3788999999999999999999999988899999999999999999999975
No 26
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.64 E-value=2.2e-16 Score=91.21 Aligned_cols=50 Identities=42% Similarity=0.595 Sum_probs=38.6
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeE
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f 50 (96)
+|++.++||||+.+.|.|.|.|+|.+.+++++.+.+.|+|.|+|||+|.|
T Consensus 61 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 61 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 37889999999999999999999999888889999999999999999988
No 27
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.6e-16 Score=92.78 Aligned_cols=57 Identities=26% Similarity=0.309 Sum_probs=51.3
Q ss_pred EEEecCCCCCCeEeccceEEEEecCCCCCeeEE----EcCCCCCCceEEEEEcCCC----ceEec
Q psy10256 38 LTLTDINDNAPEFASVINSASILENAEIGSLST----VNATIGVNRCGHTFRGKDL----RCYNL 94 (96)
Q Consensus 38 i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~----~D~D~~~n~~i~y~i~~~~----~~f~i 94 (96)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+ +|+|.|.|++|.|+|.+.. ..|.|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~I 66 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL 66 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEE
Confidence 468999999999999999999999999999998 9999999999999997653 45765
No 28
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=3.5e-14 Score=82.76 Aligned_cols=48 Identities=29% Similarity=0.460 Sum_probs=45.5
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P 48 (96)
+|++.++||||....|.|.|.|+|.|.+++++++.|.|+|.|+|||+|
T Consensus 72 ~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 72 WLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 378899999999999999999999998888999999999999999998
No 29
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=89.04 Aligned_cols=51 Identities=31% Similarity=0.382 Sum_probs=45.0
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEe-CCCCCceEEEEEEEEEecCCCCCCeEe
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQD-RDQPAWECVSLITLTLTDINDNAPEFA 51 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d-~~~~~~~~~~~v~i~v~d~Ndn~P~f~ 51 (96)
+|++.++||||....|.|+|.|+| .|+|++++++.|.|+|.|+|||+|.|.
T Consensus 194 ~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 194 EVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 478899999999999999999998 555789999999999999999999995
No 30
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=9.7e-15 Score=86.05 Aligned_cols=55 Identities=29% Similarity=0.330 Sum_probs=47.0
Q ss_pred CEEeCCCCCccCC----CEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEE
Q psy10256 1 ELKTARGLDREKI----ARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSAS 58 (96)
Q Consensus 1 ~i~~~~~LDrE~~----~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~ 58 (96)
.|++.++||||+. +.|.|.+.|.+.. +. ..+.|.|+|.|+|||+|.|..+.|.++
T Consensus 65 ~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 65 NLLLKEKLDREELCGSTNPCILHFQVLLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEESSCCCSTTTCTTCSSCCBCCEEEETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECccccchhhcccCCcEEEEEEEEECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 3788999999999 9999999999743 33 477899999999999999999888754
No 31
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.30 E-value=6e-12 Score=80.00 Aligned_cols=48 Identities=25% Similarity=0.355 Sum_probs=37.6
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeCCCC--CceEEEEEEEEEecCCCCCCe
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTDINDNAPE 49 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d~Ndn~P~ 49 (96)
|++. ++||||....|.|.|.|+|.|.+ ++++++.|.|+|.|+|||+|.
T Consensus 165 I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 165 IRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 6677 89999999999999999999875 578999999999999999995
No 32
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.17 E-value=5.3e-11 Score=67.99 Aligned_cols=43 Identities=42% Similarity=0.428 Sum_probs=39.5
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDI 43 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~ 43 (96)
+|++.++||||+.+.|.|+|.|+|.|.+++++.+.|.|+|.|+
T Consensus 63 ~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 63 WLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 4788999999999999999999999999899999999999985
No 33
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.17 E-value=1.3e-10 Score=73.42 Aligned_cols=47 Identities=21% Similarity=0.369 Sum_probs=43.1
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC-CCceEEEEEEEEEecCCCCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTDINDNA 47 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Ndn~ 47 (96)
+|++.++||||....|.|+|.|+|.++ +++++.+.+.|+|.|+|||+
T Consensus 163 ~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 163 IVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred EEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 367889999999999999999999984 67899999999999999986
No 34
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.13 E-value=1.8e-10 Score=65.22 Aligned_cols=42 Identities=29% Similarity=0.396 Sum_probs=39.3
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTD 42 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 42 (96)
+|++.++||||+...|.|.+.|+|.|++++++.+++.|+|.|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 478899999999999999999999999999999999999987
No 35
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.12 E-value=2.3e-10 Score=64.64 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=39.3
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTD 42 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 42 (96)
+|++.++||||+.+.|.|.+.|+|.|++++++.+++.|+|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 58 DVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 478899999999999999999999999999999999999987
No 36
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.10 E-value=2.8e-10 Score=64.26 Aligned_cols=42 Identities=26% Similarity=0.417 Sum_probs=39.1
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTD 42 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 42 (96)
+|++.++||||+.+.|.|.+.|+|.|++++++.+.+.|+|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 58 EVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 378899999999999999999999998889999999999987
No 37
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.09 E-value=2.5e-10 Score=64.59 Aligned_cols=42 Identities=31% Similarity=0.452 Sum_probs=38.3
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCC-CCCceEEEEEEEEEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRD-QPAWECVSLITLTLTD 42 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~-~~~~~~~~~v~i~v~d 42 (96)
+|++.++||||+.+.|.|+|.|+|.| ++++++.+.+.|+|.|
T Consensus 57 ~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 57 DIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred CEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 37889999999999999999999998 4888899999999987
No 38
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.06 E-value=3.2e-10 Score=63.99 Aligned_cols=42 Identities=31% Similarity=0.434 Sum_probs=38.2
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCC-CCceEEEEEEEEEec
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQ-PAWECVSLITLTLTD 42 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d 42 (96)
+|++.++||||+.+.|.|+|.|+|.|. +++++.+.+.|+|.|
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 378899999999999999999999997 678889999999986
No 39
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=63.31 Aligned_cols=42 Identities=26% Similarity=0.392 Sum_probs=38.0
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDIN 44 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~N 44 (96)
+|++.++||||....|.|.|.|+|.+.++ +++.|+|+|.|+|
T Consensus 73 ~I~~~~~LD~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 73 LITVQRSLDREETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred EEEECccCCcccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 37889999999999999999999998765 7789999999998
No 40
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=98.56 E-value=1.7e-07 Score=58.85 Aligned_cols=41 Identities=27% Similarity=0.366 Sum_probs=37.2
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeC-CCCCceEEEEEEEEEec
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDR-DQPAWECVSLITLTLTD 42 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~-~~~~~~~~~~v~i~v~d 42 (96)
|++. ++||||....|.|.|.|+|. |.|++++++.|.|+|.|
T Consensus 161 i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 161 IFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 6777 99999999999999999998 66778999999999987
No 41
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=98.55 E-value=1.4e-07 Score=59.57 Aligned_cols=41 Identities=27% Similarity=0.403 Sum_probs=37.6
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEec
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTD 42 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 42 (96)
|++. ++||||....|.|.|.|+|.|.+++++++.++|+|.|
T Consensus 172 i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 172 ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 5565 7899999999999999999998899999999999987
No 42
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=5.9e-09 Score=60.91 Aligned_cols=52 Identities=2% Similarity=-0.179 Sum_probs=45.0
Q ss_pred CCCCCCeEeccceEEEEecCCCCCeeEE---EcCCCCCCceEEEEEcCC------CceEec
Q psy10256 43 INDNAPEFASVINSASILENAEIGSLST---VNATIGVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 43 ~Ndn~P~f~~~~~~~~v~E~~~~g~~v~---~D~D~~~n~~i~y~i~~~------~~~f~i 94 (96)
.+.+.|.|....|.+.+.|+.++|+.|+ +|+|.|.|+.|.|+|.+. .+.|.|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~I 65 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIHSDLAEERGLKITYKYTGKGITEPPFGIFVF 65 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCCCHHHHHHTCCCEEEEEEBTTTBSSCSSEEE
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEEECCCCCCCceEEEEEecCCCCCCcCCCEEE
Confidence 4789999999999999999999999998 899999999999999643 356765
No 43
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=98.50 E-value=2.2e-07 Score=58.38 Aligned_cols=41 Identities=29% Similarity=0.443 Sum_probs=35.3
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeCCCC--CceEEEEEEEEEec
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDRDQP--AWECVSLITLTLTD 42 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d 42 (96)
|++. ++||||....|.|.|.|+|.|.+ +++++++|+|+|.|
T Consensus 164 i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 164 IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 6677 89999999999999999999876 78999999999987
No 44
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.42 E-value=4.3e-07 Score=51.40 Aligned_cols=41 Identities=32% Similarity=0.436 Sum_probs=30.0
Q ss_pred CEEeCCCCCccCCC------EEEEEEEEEeCCCCCceEEEEEEEEEecCCCC
Q psy10256 1 ELKTARGLDREKIA------RYTLNAHVQDRDQPAWECVSLITLTLTDINDN 46 (96)
Q Consensus 1 ~i~~~~~LDrE~~~------~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn 46 (96)
+|++.++||||+.. .|.+.+.+ . .| . ..+.+.|+|.|+|||
T Consensus 57 ~i~~~~~LDRE~~~~~~~~~~~~~~v~~--~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 57 ILFVNSRIDREELCGRSAECSIHLEVIV--D-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEECSCCSHHHHCSSSSSCEEEEEEEE--T-TT-T-EEEEEEEEEECCSCC
T ss_pred EEEECCcCccccccCCCCcEEEEEEEEE--C-CC-C-EEEEEEEEEEEcCCC
Confidence 37889999999863 45555443 2 23 3 377899999999998
No 45
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=98.39 E-value=3.3e-07 Score=57.98 Aligned_cols=41 Identities=34% Similarity=0.498 Sum_probs=36.5
Q ss_pred EEeC-CCCCccCCCEEEEEEEEEeCCCC---CceEEEEEEEEEec
Q psy10256 2 LKTA-RGLDREKIARYTLNAHVQDRDQP---AWECVSLITLTLTD 42 (96)
Q Consensus 2 i~~~-~~LDrE~~~~~~l~v~a~d~~~~---~~~~~~~v~i~v~d 42 (96)
|++. ++||||....|.|.|.|+|.+++ ++++++.|.|+|.|
T Consensus 171 i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 171 IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 5664 79999999999999999999877 68899999999986
No 46
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=98.38 E-value=1.1e-06 Score=55.52 Aligned_cols=37 Identities=27% Similarity=0.316 Sum_probs=34.2
Q ss_pred CCCCccC--CCEEEEEEEEEeCC--CCCceEEEEEEEEEec
Q psy10256 6 RGLDREK--IARYTLNAHVQDRD--QPAWECVSLITLTLTD 42 (96)
Q Consensus 6 ~~LDrE~--~~~~~l~v~a~d~~--~~~~~~~~~v~i~v~d 42 (96)
++||||. ...|.|.|.|+|.| .|++++++.|+|+|.|
T Consensus 178 ~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 178 ALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp GGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 6999999 67999999999999 7789999999999987
No 47
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=98.35 E-value=2.1e-06 Score=55.34 Aligned_cols=43 Identities=21% Similarity=0.277 Sum_probs=37.0
Q ss_pred CEEeCCCCCccCCCEEEEEEEEEeCCCCC---ceEEEEEEEEEecC
Q psy10256 1 ELKTARGLDREKIARYTLNAHVQDRDQPA---WECVSLITLTLTDI 43 (96)
Q Consensus 1 ~i~~~~~LDrE~~~~~~l~v~a~d~~~~~---~~~~~~v~i~v~d~ 43 (96)
+|++.++||||....|.|.|.|+|.|.++ +++.+.|+|+|..-
T Consensus 193 ~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~~ 238 (242)
T 4apx_B 193 NVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEHH 238 (242)
T ss_dssp CEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEECC
T ss_pred EEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEeec
Confidence 47889999999999999999999999874 57778888888653
No 48
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=98.20 E-value=1.5e-06 Score=48.76 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=30.5
Q ss_pred eEEEEecCCC--CCeeEE---EcCCCCCCceEEEEEcCCC--ceEec
Q psy10256 55 NSASILENAE--IGSLST---VNATIGVNRCGHTFRGKDL--RCYNL 94 (96)
Q Consensus 55 ~~~~v~E~~~--~g~~v~---~D~D~~~n~~i~y~i~~~~--~~f~i 94 (96)
+.+.|+||.+ .|+.|+ +|+|.| |++|.|+|.+.. +.|.|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~~D~D~g-N~~v~Ysi~~~~~~~~F~I 50 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLHTDLDPG-SKKIKYILSGDGAGTIFQI 50 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECCBCCCCC---CEEEEEEETTBTTTEEE
T ss_pred ceEEEECCCCCCCCeEEEEEEECCCCC-CCEEEEEEeCCCCCCEEEE
Confidence 6789999985 898888 999999 999999996543 45776
No 49
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=98.14 E-value=2.7e-06 Score=47.78 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=32.2
Q ss_pred ceEEEEecCCC--CCeeEE---EcCCCCCCceEEEEEcCCC--ceEec
Q psy10256 54 INSASILENAE--IGSLST---VNATIGVNRCGHTFRGKDL--RCYNL 94 (96)
Q Consensus 54 ~~~~~v~E~~~--~g~~v~---~D~D~~~n~~i~y~i~~~~--~~f~i 94 (96)
.+.+.|+||.+ .|+.|+ +|+|.| |++|.|+|.+.. +.|.|
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~~D~D~g-Ng~v~Ysi~~~~~~~~F~I 51 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLHSDMDRG-DGSIKYILSGEGAGIVFTI 51 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECCBTTCCS-SSCEEEEEEETTBTTTEEE
T ss_pred ccEEEEECCCCCCCCcEEEEEEECCCCC-CCEEEEEEeCCCCCceEEE
Confidence 35788999976 578887 999999 999999996543 45776
No 50
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=97.96 E-value=3.6e-06 Score=47.98 Aligned_cols=41 Identities=10% Similarity=-0.086 Sum_probs=33.7
Q ss_pred ceEEEEecCCCCCee--EE-EcCCCCCCceEEEEEcCC------CceEec
Q psy10256 54 INSASILENAEIGSL--ST-VNATIGVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 54 ~~~~~v~E~~~~g~~--v~-~D~D~~~n~~i~y~i~~~------~~~f~i 94 (96)
.|.+.|+|+.++|+. |+ .|+|.|.|+.|.|+|.+. .+.|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~vd~D~g~n~~i~Y~i~~~~~~~~~~~~F~I 55 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFII 55 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEECCCGGGGGSCCEEEEESBTTTBSSTTSEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEEeCCCCCCCEEEEEEeCCCCCCCcCCEEEE
Confidence 478999999999994 55 889999999999999642 366776
No 51
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=97.27 E-value=5.8e-05 Score=42.64 Aligned_cols=41 Identities=7% Similarity=-0.132 Sum_probs=30.2
Q ss_pred eEEEEecCCC--CCeeEE-EcCCCCCCceEEEEEcCCC------ceEecC
Q psy10256 55 NSASILENAE--IGSLST-VNATIGVNRCGHTFRGKDL------RCYNLF 95 (96)
Q Consensus 55 ~~~~v~E~~~--~g~~v~-~D~D~~~n~~i~y~i~~~~------~~f~if 95 (96)
+.+.|+||.+ .|..|+ ..+|.|.|++|.|+|.+.. +.|.|-
T Consensus 9 ~~~~V~En~~~~~~~~v~~v~Ad~g~N~~i~Ysi~~~~~~~~~~~~F~Id 58 (105)
T 2omz_B 9 PPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIE 58 (105)
T ss_dssp CCCCEESSCCSSSSEEEEECEEGGGGSSCCEEEEEEBTTTBSSTTSEEEC
T ss_pred cCEEEeCCCCCCCCcEEEEEECCCCCCCeEEEEEeCCCCCCCccCEEEEe
Confidence 3578999998 477777 4457788999999996532 467763
No 52
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=97.25 E-value=0.00026 Score=39.43 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=28.3
Q ss_pred eEEEEecCCCC--CeeEE----EcCCCCCCceEEEEEcCC------CceEec
Q psy10256 55 NSASILENAEI--GSLST----VNATIGVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 55 ~~~~v~E~~~~--g~~v~----~D~D~~~n~~i~y~i~~~------~~~f~i 94 (96)
+.+.|+||.++ |+.|+ +|+|. +++|+|.+. .+.|.|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~I 52 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKI 52 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEE
Confidence 57899999999 99998 66666 799999642 256765
No 53
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=96.75 E-value=0.0011 Score=36.94 Aligned_cols=36 Identities=8% Similarity=-0.088 Sum_probs=27.0
Q ss_pred eEEEEecCCCC--CeeEE----EcCCCCCCceEEEEEcCC------CceEec
Q psy10256 55 NSASILENAEI--GSLST----VNATIGVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 55 ~~~~v~E~~~~--g~~v~----~D~D~~~n~~i~y~i~~~------~~~f~i 94 (96)
..+.|+||.+. |+.|+ +|+|. .|+|+|.+. .+.|.|
T Consensus 6 ~~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~I 53 (100)
T 3k6f_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRI 53 (100)
T ss_dssp CCEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEE
Confidence 46799999998 78887 67666 689999542 256766
No 54
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=96.73 E-value=0.0021 Score=35.62 Aligned_cols=35 Identities=11% Similarity=-0.057 Sum_probs=26.2
Q ss_pred EEEEecCCCCC--eeEE----EcCCCCCCceEEEEEcCC------CceEec
Q psy10256 56 SASILENAEIG--SLST----VNATIGVNRCGHTFRGKD------LRCYNL 94 (96)
Q Consensus 56 ~~~v~E~~~~g--~~v~----~D~D~~~n~~i~y~i~~~------~~~f~i 94 (96)
.+.|+||.+.| +.|+ +|+|. +|+|+|.+. .+.|.|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~I 52 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRI 52 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEE
Confidence 57899999986 7777 66666 899999643 256766
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=96.65 E-value=0.00041 Score=40.32 Aligned_cols=41 Identities=20% Similarity=0.137 Sum_probs=30.1
Q ss_pred cceEEEEecCCCCCeeEE---EcCCCCCCceE---EEEEcC--CCceEec
Q psy10256 53 VINSASILENAEIGSLST---VNATIGVNRCG---HTFRGK--DLRCYNL 94 (96)
Q Consensus 53 ~~~~~~v~E~~~~g~~v~---~D~D~~~n~~i---~y~i~~--~~~~f~i 94 (96)
..|.+.|+|+.++|+.|+ +|+|.+. +.+ .|+|.+ ..+.|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~va~D~d~~~-~~i~~~~Y~i~~~~~~~~F~I 59 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNLAKDLGLSL-RELITRGAQILSKGNKQLLQL 59 (125)
T ss_dssp CCCCEEECSSCCTTCEEEESTTTTTCCH-HHHHHTTCEEECSSSSCSEEE
T ss_pred ceEEEEEECCCCCCCEEEEEEecCCCCC-CceeeEEEEEecCCCCCeEEE
Confidence 467789999999999999 6666653 334 899853 3366776
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=96.19 E-value=0.00028 Score=39.63 Aligned_cols=42 Identities=12% Similarity=-0.047 Sum_probs=30.0
Q ss_pred cceEEEEecCCCCCeeEE---EcCCCCCC--ceEEEEEcC--CCceEec
Q psy10256 53 VINSASILENAEIGSLST---VNATIGVN--RCGHTFRGK--DLRCYNL 94 (96)
Q Consensus 53 ~~~~~~v~E~~~~g~~v~---~D~D~~~n--~~i~y~i~~--~~~~f~i 94 (96)
..+.++|+|+.++|+.|+ .|.|.+.+ +.+.|+|.+ ..+.|.|
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~va~D~~~~~~~~~~~~y~i~~~~~~~~F~I 51 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEV 51 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCHHHHHTCCHHHHTTTTBCCBCSSCSCSEEE
T ss_pred eeEEEEEECCCCCCCEEEEEEeccCCCCcccccEEEEEEeCCCccEEEE
Confidence 457889999999999999 66655432 357888853 2366765
No 57
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=88.58 E-value=2 Score=23.89 Aligned_cols=45 Identities=22% Similarity=0.260 Sum_probs=32.8
Q ss_pred EEeCCCCCccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCC
Q psy10256 2 LKTARGLDREKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAP 48 (96)
Q Consensus 2 i~~~~~LDrE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P 48 (96)
|.+....|--+...|.++..+.|.. +..++...+|+|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~--Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSK--GHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTT--SCEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCC--CCEEEEEEEEEEeCCCcccC
Confidence 3445667887888999999999976 45556777788877665544
No 58
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.57 E-value=2.3 Score=23.34 Aligned_cols=32 Identities=13% Similarity=0.319 Sum_probs=24.8
Q ss_pred CCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCC
Q psy10256 12 KIARYTLNAHVQDRDQPAWECVSLITLTLTDIND 45 (96)
Q Consensus 12 ~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd 45 (96)
....|.+.+.++|.. +.+....+.|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~--G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER--NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTT--CCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCC--CCEEEeEEEEEEcCCCC
Confidence 356899999999987 56677888888876654
No 59
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=83.39 E-value=4.9 Score=28.06 Aligned_cols=30 Identities=7% Similarity=0.099 Sum_probs=25.6
Q ss_pred cCCCEEEEEEEEEeCCCCCceEEEEEEEEE
Q psy10256 11 EKIARYTLNAHVQDRDQPAWECVSLITLTL 40 (96)
Q Consensus 11 E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v 40 (96)
+....++|.++++|.+.|++++...+.|+|
T Consensus 407 ~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 407 AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 345789999999999988888888888887
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=76.15 E-value=14 Score=24.28 Aligned_cols=72 Identities=14% Similarity=0.065 Sum_probs=37.2
Q ss_pred ccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE---EcCCCCCCceEEEEE
Q psy10256 10 REKIARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEFASVINSASILENAEIGSLST---VNATIGVNRCGHTFR 85 (96)
Q Consensus 10 rE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~---~D~D~~~n~~i~y~i 85 (96)
.|....|.+.+.... ++..+......+++|.| ||++|.|.-..-...+.|+. |.... ...+....-.+.|..
T Consensus 87 ~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g~vtV~~~T 161 (298)
T 3rb5_A 87 FEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARGTVIVPYWT 161 (298)
T ss_dssp CCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCSCEEEEEEE
T ss_pred ccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCCCEEEEEEe
Confidence 454555655543221 11222222244566665 67889887666677888885 54443 333332333455654
No 61
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=72.35 E-value=8.5 Score=20.07 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=18.3
Q ss_pred cCCCEEEEEEEEEeCCCCCceEEEEEEEEEe
Q psy10256 11 EKIARYTLNAHVQDRDQPAWECVSLITLTLT 41 (96)
Q Consensus 11 E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 41 (96)
.+...|.+.+.+.|.. +......+.|+|.
T Consensus 56 ~~~G~Y~v~LtVtd~~--G~~~t~~~~V~V~ 84 (85)
T 2y72_A 56 KKAGTYNVTLKVTDDK--GATATESFTIEIK 84 (85)
T ss_dssp SSCEEEEEEEEEEETT--SCEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEECC--CCEEEEEEEEEEc
Confidence 3455788888888876 3444555556553
No 62
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=42.69 E-value=9.6 Score=22.13 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=13.0
Q ss_pred EEEEEEEEEecCCCCCC
Q psy10256 32 CVSLITLTLTDINDNAP 48 (96)
Q Consensus 32 ~~~~v~i~v~d~Ndn~P 48 (96)
.++.|++.|.|+|.||=
T Consensus 64 ESA~it~IvKDid~nPI 80 (146)
T 2lv4_A 64 ESATITTIVKDIDGNPV 80 (146)
T ss_dssp CEEEEEEECBBTTSCBC
T ss_pred cceEEEEEEEeCCCCcc
Confidence 35678899999987653
No 63
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=40.34 E-value=35 Score=19.42 Aligned_cols=6 Identities=17% Similarity=-0.285 Sum_probs=2.8
Q ss_pred CCccCC
Q psy10256 8 LDREKI 13 (96)
Q Consensus 8 LDrE~~ 13 (96)
.||...
T Consensus 52 ~Dy~~~ 57 (137)
T 3ead_A 52 TDFVGR 57 (137)
T ss_dssp TTBCCC
T ss_pred CcEeEe
Confidence 455443
No 64
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=30.77 E-value=1.1e+02 Score=19.67 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=22.8
Q ss_pred ccCCCEEEEEEEEEeCCCCCceEEEEEEEEEecC
Q psy10256 10 REKIARYTLNAHVQDRDQPAWECVSLITLTLTDI 43 (96)
Q Consensus 10 rE~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~ 43 (96)
|.+...|.+.+.+.|..+ ...+....|+|...
T Consensus 65 Y~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 65 YKNPGTYKVKLIVTDNQG--ASSSFTATIKVTSA 96 (260)
T ss_dssp CSSCEEEEEEEEEEETTS--CEEEEEEEEEEBCS
T ss_pred eCCCEEEEEEEEEEeCCC--CeEEEEEEEEECCC
Confidence 455678999999999774 34456667777654
No 65
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=29.54 E-value=1.2e+02 Score=19.80 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=21.4
Q ss_pred EEEEEEecCCCCCCeEeccceEEEEecCCCCCeeEE
Q psy10256 35 LITLTLTDINDNAPEFASVINSASILENAEIGSLST 70 (96)
Q Consensus 35 ~v~i~v~d~Ndn~P~f~~~~~~~~v~E~~~~g~~v~ 70 (96)
..+|+|.| ||++|.|.-..-...+.|+. |....
T Consensus 129 ~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v 161 (295)
T 3us9_A 129 TATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEV 161 (295)
T ss_dssp EEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEE
T ss_pred eeEEEEcc-cccccccccCCCeEEEecCC--CeEEE
Confidence 44556665 58889876555567888874 55444
No 66
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=25.29 E-value=87 Score=16.84 Aligned_cols=29 Identities=10% Similarity=0.093 Sum_probs=18.9
Q ss_pred CCEEEEEEEEEeCCCCCceEEEEEEEEEec
Q psy10256 13 IARYTLNAHVQDRDQPAWECVSLITLTLTD 42 (96)
Q Consensus 13 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 42 (96)
...|.|.+.|.|..+... ....+.|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~-tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAAS-TPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBC-CCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEE-eeeEEEEEECc
Confidence 457899999999865422 23456666643
No 67
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=22.86 E-value=1.6e+02 Score=18.87 Aligned_cols=25 Identities=12% Similarity=0.088 Sum_probs=17.9
Q ss_pred CCEEEEEEEEEeCCCCCceEEEEEEE
Q psy10256 13 IARYTLNAHVQDRDQPAWECVSLITL 38 (96)
Q Consensus 13 ~~~~~l~v~a~d~~~~~~~~~~~v~i 38 (96)
.-.|++.|.|.|..++..+. ..+++
T Consensus 210 ~TeYsF~V~A~d~~G~~Ss~-e~vtV 234 (238)
T 2w1n_A 210 HTIYNFKIAAKYSNGEVSSK-ESLTL 234 (238)
T ss_dssp TCEEEEEEEEEETTSCBCCC-EEEEE
T ss_pred CCEEEEEEEEEeCCCCcccc-CcEEE
Confidence 45799999999988765544 44444
No 68
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=20.11 E-value=1.5e+02 Score=17.69 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=22.8
Q ss_pred CCEEEEEEEEEeCCCCCceEEEEEEEEEecCCCCCCeE
Q psy10256 13 IARYTLNAHVQDRDQPAWECVSLITLTLTDINDNAPEF 50 (96)
Q Consensus 13 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Ndn~P~f 50 (96)
...|.|.+.|.|..+.. +....+.|.|.+ ..+|.-
T Consensus 60 ~G~htlta~A~D~aGn~-s~s~~v~vtV~~--~~~Ptv 94 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRR-IESPVTPVLVKV--IVKPTV 94 (190)
T ss_dssp SEEEEEEEEEEETTSCE-EECCCEEEEEEC--CCCCEE
T ss_pred CccEEEEEEEEECCCCE-eeecceeEEecc--CCCCce
Confidence 45799999999986432 222346677765 556754
Done!