RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10259
(135 letters)
>d2f5ga1 d.58.57.1 (A:2-131) Putative transposase SSO1474
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 130
Score = 28.5 bits (63), Expect = 0.15
Identities = 7/41 (17%), Positives = 13/41 (31%)
Query: 18 YHLVFDTTNRRKLLFQKTMITIISTMAMCAVVRQTYWVIMN 58
YH V+ +RR L + + A + +
Sbjct: 14 YHFVWIPKHRRNTLVNEIAEYTKEVLKSIAEELGCEIIALE 54
>d2fyxa1 d.58.57.1 (A:1-130) Putative transposase DR0177
{Deinococcus radiodurans [TaxId: 1299]}
Length = 130
Score = 27.8 bits (61), Expect = 0.25
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 18 YHLVFDTTNRRKLLFQKTMITIISTMAMCAVVRQTYWVIMN 58
YHL++ T R ++L + + + A V +
Sbjct: 13 YHLIWATKYRHQVLVDEVADGLKDILRDIATQNGLELVALE 53
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 27.6 bits (60), Expect = 0.39
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
YW + N W + GY M R +D L
Sbjct: 178 YWTVKNSWGPEWGEKGYIRMERGISDKEGL 207
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 26.9 bits (58), Expect = 0.81
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 51 QTYWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
+ YW++ N +W + GY M R L
Sbjct: 171 KNYWIVRNSWGQNWGNQGYIWMERNVASSAGL 202
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 26.9 bits (58), Expect = 0.85
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVGNLLDDKFKIAYNLTY 95
YW++ N W + G+ + G I + T+
Sbjct: 228 YWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTF 270
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 25.7 bits (55), Expect = 1.7
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 51 QTYWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
+ Y +I N +W + GY + R +
Sbjct: 172 KNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGT 203
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 25.7 bits (55), Expect = 1.8
Identities = 7/38 (18%), Positives = 14/38 (36%)
Query: 45 MCAVVRQTYWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
+ Y +I N +W + GY + R + +
Sbjct: 166 YGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGV 203
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 25.8 bits (55), Expect = 1.9
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 51 QTYWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
Y +I N W ++GY + R + +
Sbjct: 168 PNYILIKNSWGTGWGENGYIRIKRGTGNSYGV 199
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 25.7 bits (55), Expect = 2.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 51 QTYWVIMNKQDYSWDDHGYSLMNR 74
+ YW++ N +++ + GY M R
Sbjct: 177 KEYWLVKNSWGHNFGEEGYIRMAR 200
>d2vjva1 d.58.57.1 (A:6-130) ISHP608 transposase {Helicobacter
pylori [TaxId: 210]}
Length = 125
Score = 25.0 bits (54), Expect = 2.0
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 15 LVGYHLVFDTTNRRKLLFQKTMITIISTMAMCAVVRQTYWVIMN 58
YH+V+ RRK+L + + + A + + M
Sbjct: 11 SCKYHIVWCPKYRRKVLVGAVEMRLKEIIQEVAKELRVEIIEMQ 54
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 25.7 bits (55), Expect = 2.1
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
+W++ N +W + GY R +
Sbjct: 174 FWIVKNSWGKNWGESGYIRAERNIENPDGK 203
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 25.3 bits (54), Expect = 2.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVG 80
YW++ N W +GY L+ R N G
Sbjct: 189 YWIVKNSWGPQWGMNGYFLIERGKNMCG 216
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 25.0 bits (53), Expect = 3.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVGN 81
YW++ N D +W + GY + R G
Sbjct: 177 YWIVKNSWDTTWGEEGYMRILRNVGGAGT 205
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 24.6 bits (52), Expect = 4.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNR 74
+W+I N +W + GY LM R
Sbjct: 177 HWIIKNSWGENWGNKGYILMAR 198
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 24.5 bits (52), Expect = 4.2
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVG 80
+W I N W + GY ++R G
Sbjct: 176 FWAIKNSWGTDWGEKGYYYLHRGSGACG 203
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 24.6 bits (52), Expect = 4.5
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVG 80
YW++ N W ++GY + R ++
Sbjct: 192 YWIVKNSWGTGWGENGYFRIRRGTDECA 219
>d1t4ba2 d.81.1.1 (A:134-354) Aspartate beta-semialdehyde
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 221
Score = 24.7 bits (53), Expect = 4.6
Identities = 10/116 (8%), Positives = 27/116 (23%), Gaps = 5/116 (4%)
Query: 1 MPHL-SFDTMFFLGKLVGYHLVFDTTNRRKLLFQKTMITIISTMAMCAVVRQTYWVIMNK 59
+P + + + L + + + A+ + +
Sbjct: 94 IPWIDKQLDNGQSREEWKGQAET----NKILNTSSVIPVDGLCVRVGALRCHSQAFTIKL 149
Query: 60 QDYSWDDHGYSLMNRLYNDVGNLLDDKFKIAYNLTYYTLAGRTQVDTSRFRRAIWN 115
+ L+ + +D+ LT + G R R+
Sbjct: 150 KKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMG 205
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 24.5 bits (52), Expect = 4.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVG 80
YW++ N + W D+G+ + R + G
Sbjct: 215 YWLVANSWNTDWGDNGFFKILRGQDHCG 242
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 24.6 bits (52), Expect = 5.1
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVG 80
YW+I N W + GY + + N
Sbjct: 177 YWIIKNSWTTQWGEEGYIRIAKGSNQCL 204
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 24.2 bits (51), Expect = 5.6
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 51 QTYWVIMNKQDYSWDDHGYSLMNR 74
YW++ N W + GY M R
Sbjct: 166 ANYWIVRNSWGRYWGEKGYIRMLR 189
>d2bjra1 b.169.1.1 (A:6-184) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform B [TaxId: 6253]}
Length = 179
Score = 24.0 bits (52), Expect = 6.4
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 64 WDDHGYSLMNRLYNDVGNL 82
W +G + R +N+ G +
Sbjct: 33 WYKNGRPMHGRAWNNGGVI 51
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 24.1 bits (51), Expect = 6.5
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYNDVGNL 82
Y++I N W + G+ + + +
Sbjct: 199 YYIIKNSWGQQWGERGFINIETDESGLMRK 228
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus
pyogenes [TaxId: 1314]}
Length = 106
Score = 23.6 bits (51), Expect = 6.6
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 72 MNRLYNDVGNLLDDKFKIAYNLTYY 96
MN L+ LL DK L Y
Sbjct: 6 MNALFEFYAALLTDKQMNYIELYYA 30
>d2bjra2 b.169.1.1 (A:185-368) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform B [TaxId: 6253]}
Length = 184
Score = 24.0 bits (52), Expect = 7.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 64 WDDHGYSLMNRLYNDVGNL 82
W G +M R++ND G +
Sbjct: 49 WYQSGEPVMGRIWNDGGKI 67
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 23.8 bits (50), Expect = 7.4
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 53 YWVIMNKQDYSWDDHGYSLMNRLYND 78
YW++ N W +GY + + N+
Sbjct: 183 YWLVKNSWGPEWGSNGYVKIAKDKNN 208
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236
{Staphylococcus aureus, strain Mu50 / ATCC 700699
[TaxId: 1280]}
Length = 106
Score = 23.3 bits (50), Expect = 7.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 72 MNRLYNDVGNLLDDKFKIAYNLTYY 96
MN L++ +LL +K + L Y
Sbjct: 8 MNYLFDFYQSLLTNKQRNYLELFYL 32
>d2bjqa2 b.169.1.1 (A:5-174) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform A [TaxId: 6253]}
Length = 170
Score = 23.6 bits (51), Expect = 9.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 64 WDDHGYSLMNRLYNDVGNL 82
W G + R +ND GN+
Sbjct: 33 WYKFGKPIHGRAWNDNGNV 51
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.328 0.141 0.450
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 533,441
Number of extensions: 22033
Number of successful extensions: 113
Number of sequences better than 10.0: 1
Number of HSP's gapped: 113
Number of HSP's successfully gapped: 33
Length of query: 135
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 59
Effective length of database: 1,364,116
Effective search space: 80482844
Effective search space used: 80482844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 48 (23.0 bits)