Your job contains 1 sequence.
>psy10269
MGPKCALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNVGS
GAGAGPAAAAPAAAQAAAPAAAEAKEDKKKKEESDEGSDDDMGFGLFD
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10269
(108 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002593 - symbol:RpLP1 "Ribosomal protein LP1" spe... 178 2.0e-16 2
WB|WBGene00004409 - symbol:rla-1 species:6239 "Caenorhabd... 159 1.9e-14 2
UNIPROTKB|Q56K14 - symbol:RPLP1 "60S acidic ribosomal pro... 148 2.6e-13 2
UNIPROTKB|P05386 - symbol:RPLP1 "60S acidic ribosomal pro... 148 2.6e-13 2
UNIPROTKB|F1SIT7 - symbol:LOC100523874 "Uncharacterized p... 148 2.6e-13 2
MGI|MGI:1927099 - symbol:Rplp1 "ribosomal protein, large,... 148 2.6e-13 2
RGD|621774 - symbol:Rplp1 "ribosomal protein, large, P1" ... 148 2.6e-13 2
UNIPROTKB|E1BCL5 - symbol:E1BCL5 "Uncharacterized protein... 146 4.2e-13 2
UNIPROTKB|F1RJQ9 - symbol:LOC100153492 "Uncharacterized p... 151 5.3e-13 2
UNIPROTKB|P18660 - symbol:RPLP1 "60S acidic ribosomal pro... 142 1.1e-12 2
UNIPROTKB|F1RTU6 - symbol:LOC100523874 "Uncharacterized p... 142 1.1e-12 2
UNIPROTKB|A1XQU7 - symbol:RPLP1 "60S acidic ribosomal pro... 142 2.8e-12 2
RGD|1565054 - symbol:RGD1565054 "similar to 60S acidic ri... 144 5.8e-12 2
UNIPROTKB|J9P0A3 - symbol:J9P0A3 "Uncharacterized protein... 135 5.8e-12 2
ZFIN|ZDB-GENE-030131-8663 - symbol:rplp1 "ribosomal prote... 135 5.8e-12 2
UNIPROTKB|J9P5J5 - symbol:RPLP1 "Uncharacterized protein"... 138 9.3e-12 2
RGD|1591911 - symbol:LOC502350 "similar to 60S acidic rib... 128 3.1e-11 2
UNIPROTKB|F1RN65 - symbol:LOC100624171 "Uncharacterized p... 127 5.3e-10 2
TAIR|locus:2134608 - symbol:AT4G00810 species:3702 "Arabi... 119 5.3e-10 2
ASPGD|ASPL0000030976 - symbol:AN5719 species:162425 "Emer... 116 5.3e-10 2
RGD|1560815 - symbol:RGD1560815 "similar to acidic riboso... 112 1.4e-09 2
TAIR|locus:2200985 - symbol:AT1G01100 species:3702 "Arabi... 114 1.8e-09 2
TAIR|locus:2160862 - symbol:AT5G47700 species:3702 "Arabi... 113 2.2e-09 2
POMBASE|SPAC644.15 - symbol:rpp101 "60S acidic ribosomal ... 109 2.8e-09 2
POMBASE|SPCP1E11.09c - symbol:rpp103 "60S acidic ribosoma... 108 3.6e-09 2
UNIPROTKB|I3LFV6 - symbol:I3LFV6 "Uncharacterized protein... 112 5.7e-09 2
RGD|1562461 - symbol:RGD1562461 "similar to 60S acidic ri... 115 7.3e-09 2
SGD|S000002239 - symbol:RPP1A "Ribosomal stalk protein P1... 96 6.1e-08 2
CGD|CAL0006156 - symbol:RPP1A species:5476 "Candida albic... 90 2.5e-07 2
UNIPROTKB|Q9HFQ7 - symbol:RPP1A "60S acidic ribosomal pro... 90 2.5e-07 2
POMBASE|SPBC3B9.13c - symbol:rpp102 "60S acidic ribosomal... 112 1.0e-06 1
TAIR|locus:2153904 - symbol:AT5G24510 species:3702 "Arabi... 104 7.0e-06 1
DICTYBASE|DDB_G0277907 - symbol:rplP1 "60S acidic ribosom... 103 9.0e-06 1
SGD|S000005399 - symbol:RPP2A "Ribosomal protein P2 alpha... 73 1.4e-05 2
CGD|CAL0006682 - symbol:RPP1B species:5476 "Candida albic... 101 1.5e-05 1
UNIPROTKB|Q5A0A6 - symbol:RPP1B "Cytosolic ribosomal acid... 101 1.5e-05 1
SGD|S000002288 - symbol:RPP1B "Ribosomal protein P1 beta"... 90 0.00021 1
>FB|FBgn0002593 [details] [associations]
symbol:RpLP1 "Ribosomal protein LP1" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS]
[GO:0006414 "translational elongation" evidence=IEA;NAS]
[GO:0005840 "ribosome" evidence=IDA] [GO:0005811 "lipid particle"
evidence=IDA] InterPro:IPR001813 Pfam:PF00428 EMBL:AE014134
GO:GO:0005811 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
eggNOG:COG2058 KO:K02942 HAMAP:MF_01478 CTD:6176
GeneTree:ENSGT00550000074698 OMA:DVEPYWP EMBL:Y00504 EMBL:S62170
EMBL:AY069125 PIR:S00659 RefSeq:NP_476630.1 UniGene:Dm.2270
ProteinModelPortal:P08570 SMR:P08570 DIP:DIP-18310N IntAct:P08570
MINT:MINT-332892 STRING:P08570 PaxDb:P08570 PRIDE:P08570
EnsemblMetazoa:FBtr0078056 EnsemblMetazoa:FBtr0331932 GeneID:33214
KEGG:dme:Dmel_CG4087 FlyBase:FBgn0002593 InParanoid:P08570
OrthoDB:EOG4XD27V PhylomeDB:P08570 ChiTaRS:RpLP1 GenomeRNAi:33214
NextBio:782471 Bgee:P08570 GermOnline:CG4087 Uniprot:P08570
Length = 112
Score = 178 (67.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 1 MGPKCALF-LHMSYIVGSED----GEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELI 55
M K L ++ S I+ +D GEKI T+LKAA VEVEPYWPGLFAKALEG+NVK+LI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 56 SNV 58
+N+
Sbjct: 61 TNI 63
Score = 39 (18.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 106 MGFGLFD 112
>WB|WBGene00004409 [details] [associations]
symbol:rla-1 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001813 InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456
GO:GO:0009792 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
EMBL:FO081769 eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942
HAMAP:MF_01478 GeneTree:ENSGT00550000074698 OMA:DVEPYWP EMBL:U89307
RefSeq:NP_740801.1 ProteinModelPortal:P91913 SMR:P91913
IntAct:P91913 MINT:MINT-1053900 STRING:P91913 PaxDb:P91913
EnsemblMetazoa:Y37E3.7.1 EnsemblMetazoa:Y37E3.7.2
EnsemblMetazoa:Y37E3.7.3 GeneID:171766 KEGG:cel:CELE_Y37E3.7
UCSC:F18A1.5 CTD:171766 WormBase:Y37E3.7 InParanoid:P91913
NextBio:872599 Uniprot:P91913
Length = 111
Score = 159 (61.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 20 GEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
GEKI T+LKAA VE EPYWPGLFAKALEGV+VK LI++V
Sbjct: 25 GEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLITSV 63
Score = 39 (18.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 105 MGFGLFD 111
>UNIPROTKB|Q56K14 [details] [associations]
symbol:RPLP1 "60S acidic ribosomal protein P1" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0003735 GO:GO:0006414
GO:GO:0022625 eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942
HAMAP:MF_01478 EMBL:AY911313 EMBL:BC102695 IPI:IPI00702982
RefSeq:NP_001020511.1 UniGene:Bt.8125 ProteinModelPortal:Q56K14
SMR:Q56K14 STRING:Q56K14 PRIDE:Q56K14 Ensembl:ENSBTAT00000024376
GeneID:533285 KEGG:bta:533285 CTD:6176 GeneTree:ENSGT00550000074698
HOVERGEN:HBG002291 InParanoid:Q56K14 OMA:DVEPYWP OrthoDB:EOG44J2KS
NextBio:20875985 Uniprot:Q56K14
Length = 114
Score = 148 (57.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>UNIPROTKB|P05386 [details] [associations]
symbol:RPLP1 "60S acidic ribosomal protein P1" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735 "structural
constituent of ribosome" evidence=NAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001813
Pfam:PF00428 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:CH471082
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 HAMAP:MF_01478 CTD:6176 HOVERGEN:HBG002291 OMA:DVEPYWP
OrthoDB:EOG44J2KS ChiTaRS:RpLP1 EMBL:M17886 EMBL:AB061836
EMBL:AC027237 EMBL:BC003369 EMBL:BC007590 EMBL:CD388103
IPI:IPI00008527 IPI:IPI00412779 PIR:B27125 RefSeq:NP_000994.1
RefSeq:NP_998890.1 UniGene:Hs.356502 PDB:2LBF PDBsum:2LBF
ProteinModelPortal:P05386 SMR:P05386 IntAct:P05386 MINT:MINT-193188
STRING:P05386 PhosphoSite:P05386 DMDM:133051 PaxDb:P05386
PRIDE:P05386 DNASU:6176 Ensembl:ENST00000260379
Ensembl:ENST00000357790 GeneID:6176 KEGG:hsa:6176 UCSC:uc002asd.1
GeneCards:GC15P069745 HGNC:HGNC:10372 HPA:HPA003368 MIM:180520
neXtProt:NX_P05386 PharmGKB:PA34775 InParanoid:P05386
PhylomeDB:P05386 GenomeRNAi:6176 NextBio:23995 ArrayExpress:P05386
Bgee:P05386 CleanEx:HS_RPLP1 CleanEx:HS_RRP1 Genevestigator:P05386
GermOnline:ENSG00000137818 Uniprot:P05386
Length = 114
Score = 148 (57.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>UNIPROTKB|F1SIT7 [details] [associations]
symbol:LOC100523874 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 OMA:GIWADLF
GeneTree:ENSGT00550000074698 EMBL:CU638844
Ensembl:ENSSSCT00000005482 Uniprot:F1SIT7
Length = 114
Score = 148 (57.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>MGI|MGI:1927099 [details] [associations]
symbol:Rplp1 "ribosomal protein, large, P1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 MGI:MGI:1927099 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 HAMAP:MF_01478 CTD:6176 HOVERGEN:HBG002291 OMA:DVEPYWP
OrthoDB:EOG44J2KS ChiTaRS:RpLP1 EMBL:U29402 EMBL:AK007832
EMBL:AK010656 EMBL:AK088070 EMBL:BC058685 IPI:IPI00113377
RefSeq:NP_061341.1 UniGene:Mm.3158 ProteinModelPortal:P47955
SMR:P47955 IntAct:P47955 STRING:P47955 PhosphoSite:P47955
PaxDb:P47955 PRIDE:P47955 Ensembl:ENSMUST00000008036 GeneID:56040
KEGG:mmu:56040 InParanoid:P47955 NextBio:311800 Bgee:P47955
CleanEx:MM_RPLP1 Genevestigator:P47955
GermOnline:ENSMUSG00000007892 Uniprot:P47955
Length = 114
Score = 148 (57.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>RGD|621774 [details] [associations]
symbol:Rplp1 "ribosomal protein, large, P1" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR001813 Pfam:PF00428 RGD:621774
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 eggNOG:COG2058
HOGENOM:HOG000229898 KO:K02942 HAMAP:MF_01478 CTD:6176
GeneTree:ENSGT00550000074698 HOVERGEN:HBG002291 OMA:DVEPYWP
OrthoDB:EOG44J2KS EMBL:X15097 EMBL:BC058151 IPI:IPI00200145
PIR:S08022 RefSeq:NP_001007605.1 RefSeq:XP_002728498.2
RefSeq:XP_003752993.1 UniGene:Rn.973 STRING:P19944
PhosphoSite:P19944 PRIDE:P19944 Ensembl:ENSRNOT00000015893
Ensembl:ENSRNOT00000018820 GeneID:100360522 GeneID:140661
KEGG:rno:100360522 KEGG:rno:140661 UCSC:RGD:621774
InParanoid:P19944 NextBio:620626 Genevestigator:P19944
GermOnline:ENSRNOG00000011955 GermOnline:ENSRNOG00000013874
Uniprot:P19944
Length = 114
Score = 148 (57.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>UNIPROTKB|E1BCL5 [details] [associations]
symbol:E1BCL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00550000074698 EMBL:DAAA02043232 EMBL:DAAA02043233
EMBL:DAAA02043234 EMBL:DAAA02043235 EMBL:DAAA02043236
EMBL:DAAA02043237 IPI:IPI00685613 Ensembl:ENSBTAT00000052289
OMA:ADVEPIW Uniprot:E1BCL5
Length = 114
Score = 146 (56.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 31/53 (58%), Positives = 36/53 (67%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + ED KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVMED--KINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
Score = 39 (18.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>UNIPROTKB|F1RJQ9 [details] [associations]
symbol:LOC100153492 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 OMA:STELACC
GeneTree:ENSGT00550000074698 EMBL:CT737356
Ensembl:ENSSSCT00000010611 Uniprot:F1RJQ9
Length = 114
Score = 151 (58.2 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + + ED KI ++KAAGV+VEP+WPGLFAKAL VN+ LI NV
Sbjct: 13 ALILHNNEVTVQED--KINALIKAAGVDVEPFWPGLFAKALANVNIGSLICNV 63
Score = 33 (16.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 102 MGFGLFD 108
M FGLFD
Sbjct: 108 MSFGLFD 114
>UNIPROTKB|P18660 [details] [associations]
symbol:RPLP1 "60S acidic ribosomal protein P1" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0003735 GO:GO:0006414
GO:GO:0022625 eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942
HAMAP:MF_01478 CTD:6176 GeneTree:ENSGT00550000074698
HOVERGEN:HBG002291 OMA:DVEPYWP OrthoDB:EOG44J2KS EMBL:X13876
IPI:IPI00599307 PIR:S02029 RefSeq:NP_990653.1 UniGene:Gga.23911
STRING:P18660 PRIDE:P18660 Ensembl:ENSGALT00000026062 GeneID:396262
KEGG:gga:396262 InParanoid:P18660 NextBio:20816314 Uniprot:P18660
Length = 114
Score = 142 (55.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+WPGLFAKAL +++ LI NV
Sbjct: 13 ALILHDDEVTVTED--KINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNV 63
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>UNIPROTKB|F1RTU6 [details] [associations]
symbol:LOC100523874 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 GeneTree:ENSGT00550000074698
EMBL:CU407116 Ensembl:ENSSSCT00000004710 OMA:SSELACV Uniprot:F1RTU6
Length = 108
Score = 142 (55.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED KI ++KAAGV VEP+W GLFAKAL VN++ LI NV
Sbjct: 13 ALILHNYELTVTED--KINALIKAAGVNVEPFWSGLFAKALANVNIRSLICNV 63
Score = 39 (18.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 102 MGFGLFD 108
>UNIPROTKB|A1XQU7 [details] [associations]
symbol:RPLP1 "60S acidic ribosomal protein P1" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 HAMAP:MF_01478 HOVERGEN:HBG002291 OrthoDB:EOG44J2KS
EMBL:DQ629169 RefSeq:NP_001123436.1 UniGene:Ssc.51793 STRING:A1XQU7
GeneID:100170119 KEGG:ssc:100170119 Uniprot:A1XQU7
Length = 114
Score = 142 (55.0 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 30/53 (56%), Positives = 35/53 (66%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + ED KI ++KAAGV VEP+WPG FAKAL VN+ LI NV
Sbjct: 13 ALILHDDEVTVPED--KINALIKAAGVNVEPFWPGFFAKALANVNIGSLICNV 63
Score = 35 (17.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 102 MGFGLFD 108
MGFG FD
Sbjct: 108 MGFGFFD 114
>RGD|1565054 [details] [associations]
symbol:RGD1565054 "similar to 60S acidic ribosomal protein P1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 RGD:1565054 GO:GO:0003735
GO:GO:0006414 GO:GO:0022625 OMA:KVEELAC OrthoDB:EOG44J2KS
IPI:IPI00367126 RefSeq:XP_001066800.2 RefSeq:XP_234147.2
Ensembl:ENSRNOT00000034714 GeneID:299041 KEGG:rno:299041 CTD:299041
NextBio:644697 Uniprot:D4AA76
Length = 102
Score = 144 (55.7 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + + +ED KI ++KAAGV VEP+WPGLFA+AL VN+ LI NV
Sbjct: 13 ALILHDNEVTVTED--KINVLIKAAGVNVEPFWPGLFAEALANVNIGSLIYNV 63
Score = 30 (15.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 102 MGFGLFD 108
MGF LFD
Sbjct: 96 MGFCLFD 102
>UNIPROTKB|J9P0A3 [details] [associations]
symbol:J9P0A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00550000074698 OMA:ADVEPIW EMBL:AAEX03005855
Ensembl:ENSCAFT00000026981 Uniprot:J9P0A3
Length = 114
Score = 135 (52.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELI 55
AL LH ++ ED KI ++K AGV VEP+WPGLFAKAL VN+ LI
Sbjct: 13 ALLLHDHEVIVMED--KINALIKTAGVNVEPFWPGLFAKALANVNIGSLI 60
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 108 MGFGLFD 114
>ZFIN|ZDB-GENE-030131-8663 [details] [associations]
symbol:rplp1 "ribosomal protein, large, P1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 ZFIN:ZDB-GENE-030131-8663 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 HOVERGEN:HBG002291 EMBL:AY561519 IPI:IPI00511901
UniGene:Dr.76031 STRING:Q6Q414 InParanoid:Q6Q414 Uniprot:Q6Q414
Length = 113
Score = 135 (52.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + +ED K+ ++K AGV +EP+WPGLFAKAL V++ LI NV
Sbjct: 13 ALILHDDEVTVTED--KLNALIKVAGVTIEPFWPGLFAKALASVDIGSLICNV 63
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 107 MGFGLFD 113
>UNIPROTKB|J9P5J5 [details] [associations]
symbol:RPLP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 InterPro:IPR001859 Pfam:PF00428 PRINTS:PR00456
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 OMA:GIWADLF
GeneTree:ENSGT00550000074698 EMBL:AAEX03026447
Ensembl:ENSCAFT00000026255 Uniprot:J9P5J5
Length = 114
Score = 138 (53.6 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH + ++ +ED KI +++KAAGV VE +WPGLFAKAL +N+ LI NV
Sbjct: 13 ALILHDNEVMVTED--KINSLIKAAGVNVELFWPGLFAKALANMNIGSLICNV 63
Score = 34 (17.0 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLF+
Sbjct: 108 MGFGLFN 114
>RGD|1591911 [details] [associations]
symbol:LOC502350 "similar to 60S acidic ribosomal protein P1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 RGD:1591911 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 OrthoDB:EOG44J2KS IPI:IPI00566844
Ensembl:ENSRNOT00000044498 OMA:ADSICAV Uniprot:D3ZPM8
Length = 108
Score = 128 (50.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 25/38 (65%), Positives = 30/38 (78%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+KI ++KAAGV VEP+WPGLFAKAL VN+ LI NV
Sbjct: 20 DKIIALIKAAGVIVEPFWPGLFAKALANVNIGSLICNV 57
Score = 39 (18.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 102 MGFGLFD 108
>UNIPROTKB|F1RN65 [details] [associations]
symbol:LOC100624171 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00550000074698 EMBL:CU856503
Ensembl:ENSSSCT00000015490 Uniprot:F1RN65
Length = 91
Score = 127 (49.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 22 KIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
++ ++KAAGV VEP+WPGLFAKAL +N+ LI NV
Sbjct: 4 EVNALIKAAGVNVEPFWPGLFAKALANINIHNLICNV 40
Score = 28 (14.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 5/5 (100%), Positives = 5/5 (100%)
Query: 103 GFGLF 107
GFGLF
Sbjct: 86 GFGLF 90
>TAIR|locus:2134608 [details] [associations]
symbol:AT4G00810 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001813 Pfam:PF00428 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003735 EMBL:AL161472
GO:GO:0022626 EMBL:AF013294 UniGene:At.21221 GO:GO:0006414
eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942
ProtClustDB:CLSN2682833 HAMAP:MF_01478 EMBL:AF361624 EMBL:AY055096
EMBL:AY086636 IPI:IPI00521382 PIR:T01565 RefSeq:NP_567190.1
RefSeq:NP_849278.1 UniGene:At.19113 UniGene:At.67853
ProteinModelPortal:O23095 SMR:O23095 STRING:O23095 PaxDb:O23095
PRIDE:O23095 EnsemblPlants:AT4G00810.1 EnsemblPlants:AT4G00810.2
GeneID:828004 KEGG:ath:AT4G00810 TAIR:At4g00810 InParanoid:O23095
OMA:KVEELAC PhylomeDB:O23095 Genevestigator:O23095
GermOnline:AT4G00810 Uniprot:O23095
Length = 113
Score = 119 (46.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+KI T++KAAGVE+E YWP LFAK E NV +LI NV
Sbjct: 26 DKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNV 63
Score = 36 (17.7 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
+GFGLFD
Sbjct: 107 LGFGLFD 113
>ASPGD|ASPL0000030976 [details] [associations]
symbol:AN5719 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 EMBL:AACD01000098
EMBL:BN001305 GO:GO:0003735 GO:GO:0006414 eggNOG:COG2058
HOGENOM:HOG000229898 KO:K02942 OrthoDB:EOG4JDMHM OMA:ASELPEC
RefSeq:XP_663323.1 STRING:Q5B161 EnsemblFungi:CADANIAT00003343
GeneID:2872009 KEGG:ani:AN5719.2 Uniprot:Q5B161
Length = 109
Score = 116 (45.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 21 EKIQTVLKAAGV-EVEPYWPGLFAKALEGVNVKELISNV 58
+K+QT+L AA V EVEP W +FAKALEG ++K+L++NV
Sbjct: 25 DKLQTLLTAAKVQEVEPIWTSIFAKALEGKDIKDLLTNV 63
Score = 39 (18.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 103 MGFGLFD 109
>RGD|1560815 [details] [associations]
symbol:RGD1560815 "similar to acidic ribosomal phosphoprotein
P1" species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 RGD:1560815 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 OrthoDB:EOG44J2KS IPI:IPI00211963
RefSeq:XP_001064817.1 RefSeq:XP_225924.1 PhosphoSite:D4A3K4
PRIDE:D4A3K4 Ensembl:ENSRNOT00000023055 GeneID:291550
KEGG:rno:291550 UCSC:RGD:1560815 CTD:291550 OMA:NIGSPIH
NextBio:632740 Uniprot:D4A3K4
Length = 93
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 7 LFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNV 51
+ L+ + +ED +I ++KAAGV VEP+WPGLFAKAL VN+
Sbjct: 15 ILLNDDEVTVAED--EISALIKAAGVSVEPFWPGLFAKALTIVNI 57
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 87 MGFGLFD 93
>TAIR|locus:2200985 [details] [associations]
symbol:AT1G01100 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR001813 Pfam:PF00428 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634 GO:GO:0003735
GO:GO:0022626 GO:GO:0006414 EMBL:AC007323 EMBL:AY050975
EMBL:AY091176 EMBL:AY086359 IPI:IPI00518460 PIR:E86141
RefSeq:NP_001077439.1 RefSeq:NP_171618.1 RefSeq:NP_849569.1
UniGene:At.11901 ProteinModelPortal:Q8LCW9 SMR:Q8LCW9 IntAct:Q8LCW9
STRING:Q8LCW9 PaxDb:Q8LCW9 PRIDE:Q8LCW9 ProMEX:Q8LCW9
EnsemblPlants:AT1G01100.1 EnsemblPlants:AT1G01100.2
EnsemblPlants:AT1G01100.4 GeneID:839410 KEGG:ath:AT1G01100
TAIR:At1g01100 eggNOG:COG2058 HOGENOM:HOG000229898
InParanoid:Q8LCW9 KO:K02942 OMA:STELACC PhylomeDB:Q8LCW9
ProtClustDB:CLSN2682833 Genevestigator:Q8LCW9 GermOnline:AT1G01100
HAMAP:MF_01478 Uniprot:Q8LCW9
Length = 112
Score = 114 (45.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+KI T++KAAGV +E YWP LFAK E NV +LI NV
Sbjct: 26 DKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNV 63
Score = 36 (17.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
+GFGLFD
Sbjct: 106 LGFGLFD 112
>TAIR|locus:2160862 [details] [associations]
symbol:AT5G47700 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016886 GO:GO:0003735
GO:GO:0022626 GO:GO:0006414 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 ProtClustDB:CLSN2682833 HAMAP:MF_01478 EMBL:AY070049
EMBL:AY096430 EMBL:AY085303 IPI:IPI00517828 RefSeq:NP_001078728.1
RefSeq:NP_199581.1 UniGene:At.9392 ProteinModelPortal:Q8LEQ0
SMR:Q8LEQ0 IntAct:Q8LEQ0 STRING:Q8LEQ0 PaxDb:Q8LEQ0 PRIDE:Q8LEQ0
EnsemblPlants:AT5G47700.1 EnsemblPlants:AT5G47700.2 GeneID:834821
KEGG:ath:AT5G47700 TAIR:At5g47700 InParanoid:Q8LEQ0 OMA:GIWADLF
PhylomeDB:Q8LEQ0 Genevestigator:Q8LEQ0 GermOnline:AT5G47700
Uniprot:Q8LEQ0
Length = 113
Score = 113 (44.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+KI T++KAAGV +E YWP LFAK E NV +LI NV
Sbjct: 26 DKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNV 63
Score = 36 (17.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
+GFGLFD
Sbjct: 107 LGFGLFD 113
>POMBASE|SPAC644.15 [details] [associations]
symbol:rpp101 "60S acidic ribosomal protein Rpp1-1"
species:4896 "Schizosaccharomyces pombe" [GO:0002182 "cytoplasmic
translational elongation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006414 "translational elongation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001813 Pfam:PF00428 PomBase:SPAC644.15 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002182 GO:GO:0022625
EMBL:Z22691 EMBL:Z24756 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 HAMAP:MF_01478 OMA:GIWADLF EMBL:M33137 PIR:A34715
RefSeq:NP_593883.1 STRING:P17476 PRIDE:P17476
EnsemblFungi:SPAC644.15.1 GeneID:2543217 KEGG:spo:SPAC644.15
OrthoDB:EOG4JDMHM NextBio:20804239 Uniprot:P17476
Length = 109
Score = 109 (43.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+K+ ++ KAA V+VEP W +FAKALEG ++KEL+ N+
Sbjct: 25 DKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNI 62
Score = 39 (18.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 103 MGFGLFD 109
>POMBASE|SPCP1E11.09c [details] [associations]
symbol:rpp103 "60S acidic ribosomal protein Rpp1-3"
species:4896 "Schizosaccharomyces pombe" [GO:0002182 "cytoplasmic
translational elongation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006414
"translational elongation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001813
Pfam:PF00428 PomBase:SPCP1E11.09c GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002182 GO:GO:0022625
eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942 HAMAP:MF_01478
EMBL:AJ002733 PIR:T41688 RefSeq:NP_588562.1 STRING:Q9UU78
PRIDE:Q9UU78 EnsemblFungi:SPCP1E11.09c.1 GeneID:2539598
KEGG:spo:SPCP1E11.09c OMA:ASELPEC NextBio:20800755 Uniprot:Q9UU78
Length = 109
Score = 108 (43.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+K+ ++ KA VEVEP W +FAKALEG ++KEL+ N+
Sbjct: 25 DKLLSLTKAGNVEVEPIWATIFAKALEGKDLKELLLNI 62
Score = 39 (18.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 103 MGFGLFD 109
>UNIPROTKB|I3LFV6 [details] [associations]
symbol:I3LFV6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006414 "translational elongation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00550000074698 EMBL:FP326712 EMBL:CT797464
Ensembl:ENSSSCT00000028004 OMA:SINSACK Uniprot:I3LFV6
Length = 101
Score = 112 (44.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELI 55
AL LH ++ ED KI ++KAA V VEP+ PG F KAL VN++ LI
Sbjct: 13 ALILHDDEVMVMED--KINDLIKAASVNVEPFLPGSFTKALANVNIRSLI 60
Score = 33 (16.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 102 MGFGLFD 108
MG GLFD
Sbjct: 95 MGLGLFD 101
>RGD|1562461 [details] [associations]
symbol:RGD1562461 "similar to 60S acidic ribosomal protein P1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 RGD:1562461 GO:GO:0005840
GO:GO:0003735 GO:GO:0006414 IPI:IPI00564697
Ensembl:ENSRNOT00000032583 Uniprot:D3ZP11
Length = 79
Score = 115 (45.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
+KI ++KAAGV E +WPGLFAKAL VN+ LI +V
Sbjct: 3 DKINALIKAAGVNGEAFWPGLFAKALTSVNIGSLIGSV 40
Score = 29 (15.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 102 MGFGLFD 108
+G GLFD
Sbjct: 73 VGIGLFD 79
>SGD|S000002239 [details] [associations]
symbol:RPP1A "Ribosomal stalk protein P1 alpha" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 SGD:S000002239 EMBL:BK006938
GO:GO:0003735 GO:GO:0002181 GO:GO:0006414 GO:GO:0022625 PDB:3IZS
PDBsum:3IZS eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942
HAMAP:MF_01478 OMA:GIWADLF GeneTree:ENSGT00550000074698
OrthoDB:EOG4JDMHM EMBL:X06957 EMBL:X13682 EMBL:D90072 EMBL:M26504
EMBL:Z74129 EMBL:AY558526 PIR:S67617 RefSeq:NP_010202.1
DisProt:DP00164 ProteinModelPortal:P05318 SMR:P05318 DIP:DIP-1583N
IntAct:P05318 MINT:MINT-384141 STRING:P05318 PaxDb:P05318
PeptideAtlas:P05318 EnsemblFungi:YDL081C GeneID:851478
KEGG:sce:YDL081C NextBio:968786 Genevestigator:P05318
GermOnline:YDL081C Uniprot:P05318
Length = 106
Score = 96 (38.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISN 57
EK+ T+ AA V VE W +FAKAL+G N+K+L+ N
Sbjct: 24 EKLLTLTNAANVPVENIWADIFAKALDGQNLKDLLVN 60
Score = 39 (18.8 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 100 MGFGLFD 106
>CGD|CAL0006156 [details] [associations]
symbol:RPP1A species:5476 "Candida albicans" [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005840
"ribosome" evidence=IDA] [GO:0006412 "translation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001813 Pfam:PF00428 CGD:CAL0006156
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL033497 GO:GO:0006414 eggNOG:COG2058 KO:K02942
HAMAP:MF_01478 EMBL:AF317659 PIR:T52147 RefSeq:XP_721218.1
RefSeq:XP_721490.1 STRING:Q9HFQ7 GeneID:3636839 GeneID:3637126
KEGG:cal:CaO19.10509 KEGG:cal:CaO19.2992 Uniprot:Q9HFQ7
Length = 106
Score = 90 (36.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISN 57
EK+ ++ A VEVE W LFAKALEG ++KE N
Sbjct: 24 EKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFN 60
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 100 MGFGLFD 106
>UNIPROTKB|Q9HFQ7 [details] [associations]
symbol:RPP1A "60S acidic ribosomal protein P1-A"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=ISS;IDA] [GO:0005840 "ribosome"
evidence=IDA] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001813 Pfam:PF00428 CGD:CAL0006156 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AL033497 GO:GO:0006414 eggNOG:COG2058 KO:K02942 HAMAP:MF_01478
EMBL:AF317659 PIR:T52147 RefSeq:XP_721218.1 RefSeq:XP_721490.1
STRING:Q9HFQ7 GeneID:3636839 GeneID:3637126 KEGG:cal:CaO19.10509
KEGG:cal:CaO19.2992 Uniprot:Q9HFQ7
Length = 106
Score = 90 (36.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISN 57
EK+ ++ A VEVE W LFAKALEG ++KE N
Sbjct: 24 EKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFN 60
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 100 MGFGLFD 106
>POMBASE|SPBC3B9.13c [details] [associations]
symbol:rpp102 "60S acidic ribosomal protein Rpp1-2"
species:4896 "Schizosaccharomyces pombe" [GO:0002182 "cytoplasmic
translational elongation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006414 "translational elongation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001813 Pfam:PF00428 PomBase:SPBC3B9.13c EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002182 GO:GO:0022625
eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942 HAMAP:MF_01478
EMBL:M33139 PIR:C34715 RefSeq:NP_596671.1 STRING:P17477
EnsemblFungi:SPBC3B9.13c.1 GeneID:2540299 KEGG:spo:SPBC3B9.13c
OMA:KAELACT NextBio:20801429 Uniprot:P17477
Length = 110
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 27/88 (30%), Positives = 37/88 (42%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNVXXXXXXXXXXXXXXXXXXXXXX 80
+K+ ++ KAA V+VEP W +FAKALEG ++KEL+ N+
Sbjct: 25 DKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNIGSAAAAPAAGGAGAPAAAAGGE 84
Query: 81 XXXXXXXXXXXXXXXXXXXXXMGFGLFD 108
MGFGLFD
Sbjct: 85 AAAEEQKEEAKEEEESDED--MGFGLFD 110
>TAIR|locus:2153904 [details] [associations]
symbol:AT5G24510 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0022626 "cytosolic
ribosome" evidence=IDA] InterPro:IPR001813 Pfam:PF00428
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003735 GO:GO:0022626
EMBL:AB010068 GO:GO:0006414 eggNOG:COG2058 HOGENOM:HOG000229898
KO:K02942 EMBL:DQ056686 IPI:IPI00530664 RefSeq:NP_197839.1
UniGene:At.54977 ProteinModelPortal:Q9FLV1 SMR:Q9FLV1 STRING:Q9FLV1
EnsemblPlants:AT5G24510.1 GeneID:832522 KEGG:ath:AT5G24510
TAIR:At5g24510 InParanoid:Q9FLV1 OMA:ICNERAG PhylomeDB:Q9FLV1
Genevestigator:Q9FLV1 Uniprot:Q9FLV1
Length = 111
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/53 (47%), Positives = 29/53 (54%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNV 58
AL LH I E I ++K A V VE YWP LFAK E N+ +LI NV
Sbjct: 12 ALILHDDGI--EITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNV 62
>DICTYBASE|DDB_G0277907 [details] [associations]
symbol:rplP1 "60S acidic ribosomal protein P1"
species:44689 "Dictyostelium discoideum" [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001813 Pfam:PF00428
dictyBase:DDB_G0277907 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 KO:K02942 HAMAP:MF_01478
OMA:DVEPYWP EMBL:X56193 PIR:S14013 RefSeq:XP_642424.1 STRING:P22684
EnsemblProtists:DDB0214917 GeneID:8621629 KEGG:ddi:DDB_G0277907
eggNOG:NOG134574 Uniprot:P22684
Length = 113
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISN 57
+KI+T+L+AA + V +WPGL+A++L VN+ EL+ N
Sbjct: 28 DKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLN 64
>SGD|S000005399 [details] [associations]
symbol:RPP2A "Ribosomal protein P2 alpha" species:4932
"Saccharomyces cerevisiae" [GO:0005840 "ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=IEA;ISS] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 SGD:S000005399 EMBL:BK006948
GO:GO:0003735 GO:GO:0002181 GO:GO:0006414 GO:GO:0022625 PDB:3IZS
PDBsum:3IZS eggNOG:COG2058 HAMAP:MF_01478 HOGENOM:HOG000229897
KO:K02943 GeneTree:ENSGT00550000074828 OrthoDB:EOG4CZFRQ
EMBL:X06958 EMBL:J03760 EMBL:M26503 EMBL:Z74781 EMBL:AY692793
PIR:B28104 RefSeq:NP_014603.1 ProteinModelPortal:P05319 SMR:P05319
DIP:DIP-2506N IntAct:P05319 MINT:MINT-531798 STRING:P05319
Allergome:9537 PaxDb:P05319 PeptideAtlas:P05319
EnsemblFungi:YOL039W GeneID:854118 KEGG:sce:YOL039W CYGD:YOL039w
OMA:NIEDVMA NextBio:975819 Genevestigator:P05319 GermOnline:YOL039W
Uniprot:P05319
Length = 106
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 6 ALFLHMSYIVGSEDGEKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELIS 56
A +L ++ + D KI+ +L++ G+E+E ALEG +V ELI+
Sbjct: 5 AAYLLLNAAGNTPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELIT 55
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 102 MGFGLFD 108
MGFGLFD
Sbjct: 100 MGFGLFD 106
>CGD|CAL0006682 [details] [associations]
symbol:RPP1B species:5476 "Candida albicans" [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005840
"ribosome" evidence=IDA] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001813 Pfam:PF00428 CGD:CAL0006682 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 KO:K02942
EMBL:AACQ01000089 RefSeq:XP_715237.1 RefSeq:XP_888997.1
STRING:Q5A0A6 GeneID:3643104 GeneID:3704063 KEGG:cal:CaO19.7188
KEGG:cal:CaO19_7188 Uniprot:Q5A0A6
Length = 108
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/88 (28%), Positives = 32/88 (36%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNVXXXXXXXXXXXXXXXXXXXXXX 80
EK+ + KAAG V+ W +FAKA+EG N KEL+ +
Sbjct: 24 EKLLAITKAAGANVDQVWADVFAKAVEGKNFKELLFSFAAAAPASGAAAGSASGAAAGGE 83
Query: 81 XXXXXXXXXXXXXXXXXXXXXMGFGLFD 108
MGFGLFD
Sbjct: 84 AAAEEAAEEEAAEESDDD---MGFGLFD 108
>UNIPROTKB|Q5A0A6 [details] [associations]
symbol:RPP1B "Cytosolic ribosomal acidic protein P1B"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=ISS;IDA] [GO:0005840 "ribosome"
evidence=IDA] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001813 Pfam:PF00428 CGD:CAL0006682 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 KO:K02942
EMBL:AACQ01000089 RefSeq:XP_715237.1 RefSeq:XP_888997.1
STRING:Q5A0A6 GeneID:3643104 GeneID:3704063 KEGG:cal:CaO19.7188
KEGG:cal:CaO19_7188 Uniprot:Q5A0A6
Length = 108
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/88 (28%), Positives = 32/88 (36%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELISNVXXXXXXXXXXXXXXXXXXXXXX 80
EK+ + KAAG V+ W +FAKA+EG N KEL+ +
Sbjct: 24 EKLLAITKAAGANVDQVWADVFAKAVEGKNFKELLFSFAAAAPASGAAAGSASGAAAGGE 83
Query: 81 XXXXXXXXXXXXXXXXXXXXXMGFGLFD 108
MGFGLFD
Sbjct: 84 AAAEEAAEEEAAEESDDD---MGFGLFD 108
>SGD|S000002288 [details] [associations]
symbol:RPP1B "Ribosomal protein P1 beta" species:4932
"Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 SGD:S000002288 EMBL:BK006938
GO:GO:0003735 GO:GO:0002181 GO:GO:0006414 GO:GO:0022625
eggNOG:COG2058 HOGENOM:HOG000229898 KO:K02942 HAMAP:MF_01478
GeneTree:ENSGT00550000074698 OrthoDB:EOG4JDMHM EMBL:M19238
EMBL:M26507 EMBL:Z74178 PIR:C28104 RefSeq:NP_010153.1
ProteinModelPortal:P10622 SMR:P10622 DIP:DIP-2055N IntAct:P10622
MINT:MINT-476255 STRING:P10622 PaxDb:P10622 PeptideAtlas:P10622
EnsemblFungi:YDL130W GeneID:851427 KEGG:sce:YDL130W OMA:KHESEDS
NextBio:968642 Genevestigator:P10622 GermOnline:YDL130W
Uniprot:P10622
Length = 106
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 21 EKIQTVLKAAGVEVEPYWPGLFAKALEGVNVKELIS 56
+ + T+ KAAG V+ W ++AKALEG ++KE++S
Sbjct: 23 DNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.141 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 108 65 0.00091 102 3 11 22 0.44 28
29 0.46 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 474 (50 KB)
Total size of DFA: 81 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:18
No. of threads or processors used: 24
Search cpu time: 7.26u 0.09s 7.35t Elapsed: 00:00:10
Total cpu time: 7.26u 0.09s 7.35t Elapsed: 00:00:28
Start: Thu Aug 15 14:09:55 2013 End: Thu Aug 15 14:10:23 2013