RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10278
         (110 letters)



>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 39

 Score = 38.4 bits (90), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQ-HTREKPYAC 54
          KP+ C  CG    R   L  H++Q HT E+P+ C
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37



 Score = 26.9 bits (60), Expect = 0.10
 Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 47 TREKPYACPTCEFKTGDHNVLRKHVQR-HMPVKKYQC 82
          +  KPY C +C       + L  H+++ H   + ++C
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37



 Score = 23.8 bits (52), Expect = 1.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 10 LKKHIREVHKRLKPFQCPV 28
          L  HI++VH   +P +C V
Sbjct: 21 LNGHIKQVHTSERPHKCQV 39



 Score = 22.3 bits (48), Expect = 6.2
 Identities = 7/26 (26%), Positives = 8/26 (30%)

Query: 78  KKYQCTFCSYSCTERFRLKDHTLAKH 103
           K Y C  C    +    L  H    H
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVH 29


>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 33

 Score = 33.7 bits (78), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 17 VHKRLKPFQCPVCGFTTGRKATLQLHVRQHTRE 49
          +H   KP+ C  CG    R + L  H R HT E
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33



 Score = 28.4 bits (64), Expect = 0.031
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 46 HTREKPYACPTCEFKTGDHNVLRKHVQRH 74
          H+ EKPY C  C       ++L +H + H
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVH 30


>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 29

 Score = 33.5 bits (77), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTREK 50
          K F CP C     R   L  H++ H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29


>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
          Saccharomyces cerevisiae sequence}
          Length = 29

 Score = 33.4 bits (77), Expect = 3e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTREK 50
          + F C VC     R+  L+ H R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29


>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 32.8 bits (75), Expect = 7e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 26 CPVCGFTTGRKATLQLHVRQHTREKPYAC 54
           P CG +   K  L+ H++ H+  + Y C
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34


>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 44 RQHTREKPYACPTCEFKTGDHNVLRKHVQRH 74
          R H+ EKPY C  C  +      ++ H+ + 
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQK 31



 Score = 27.6 bits (62), Expect = 0.046
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 17 VHKRLKPFQCPVCGFTTGRKATLQLHV-RQHTRE 49
           H   KP++C +C     +  T+++H+ ++HT  
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35



 Score = 23.4 bits (51), Expect = 2.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 74  HMPVKKYQCTFCSYSCTERFRLKDHTLAKH 103
           H   K Y+C  C    T+   +K H L KH
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKH 32


>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
          musculus) [TaxId: 10090]}
          Length = 37

 Score = 31.6 bits (72), Expect = 0.001
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 42 HVRQHTREKPYACPTCEFKTGDHNVLRKHVQRHMPV 77
            R  T  KP+ CP C+      + L  H +RHM V
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37



 Score = 25.8 bits (57), Expect = 0.23
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 13 HIREVHKRLKPFQCPVCGFTTGRKATLQLHVRQHTR 48
            R     +KPFQCP C  +  R   L LH ++H  
Sbjct: 2  STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36


>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 30.8 bits (70), Expect = 0.004
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 17 VHKRLKPFQCPVCGFTTGRKATLQLHVRQHTREK 50
           H   KP+ C  C  T  +K  L +H +++    
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35



 Score = 29.3 bits (66), Expect = 0.012
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 44 RQHTREKPYACPTCEFKTGDHNVLRKHVQRH 74
          R HT EKPYAC  C+       +L  H +R+
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31


>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
          protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 38

 Score = 30.5 bits (69), Expect = 0.004
 Identities = 8/33 (24%), Positives = 11/33 (33%)

Query: 42 HVRQHTREKPYACPTCEFKTGDHNVLRKHVQRH 74
             Q    + Y C  C       + L KH + H
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35



 Score = 29.7 bits (67), Expect = 0.008
 Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 12 KHIREVHKRLKPFQCPVCGFTTGRKATLQLHVRQHTRE 49
          +      +  + ++C  CG +    + L  H R HT E
Sbjct: 2  RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38


>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
          10090]}
          Length = 28

 Score = 29.5 bits (67), Expect = 0.010
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHT 47
          KPFQC +C     R   L  H+R HT
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHT 27



 Score = 21.8 bits (47), Expect = 7.4
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 49 EKPYACPTCEFKTGDHNVLRKHVQRH 74
          +KP+ C  C       + L  H++ H
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTH 26


>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 53

 Score = 29.3 bits (65), Expect = 0.022
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTREKPYACPTCEFKTGDHNVLRKHVQRH 74
          K + C  CG +   K+    H+  H   +PY C  C  K    + L  H++ H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53



 Score = 27.0 bits (59), Expect = 0.15
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 49 EKPYACPTCEFKTGDHNVLRKHVQRHMPVKKYQCTFCSYSCTERFRLKDH 98
          +K Y C  C       +   +H+  H+ ++ Y C  C      +  L  H
Sbjct: 1  DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49



 Score = 22.3 bits (47), Expect = 7.4
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 9  CLKKHIREVHKRLKPFQCPVCGFTTGRKATLQLHVRQH 46
             +H+       +P+ C VCG     K  L  H++ H
Sbjct: 17 QRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53


>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 31

 Score = 27.7 bits (62), Expect = 0.042
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 22 KPFQC--PVCGFTTGRKATLQLHVRQHTREK 50
          +PF C    CG    R   LQ H R HT EK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31


>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 32

 Score = 26.9 bits (59), Expect = 0.082
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQH 46
          KP+ CPVCG    RK  +  HVR H
Sbjct: 2  KPYSCPVCGLRFKRKDRMSYHVRSH 26



 Score = 21.9 bits (46), Expect = 6.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 49 EKPYACPTCEFKTGDHNVLRKHVQRH 74
          EKPY+CP C  +    + +  HV+ H
Sbjct: 1  EKPYSCPVCGLRFKRKDRMSYHVRSH 26


>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
          (Mus musculus) [TaxId: 10090]}
          Length = 35

 Score = 27.0 bits (60), Expect = 0.085
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTRE 49
          +PF C +C      KA    H++ HT  
Sbjct: 6  RPFVCRICLSAFTTKANCARHLKVHTDT 33



 Score = 25.5 bits (56), Expect = 0.34
 Identities = 5/29 (17%), Positives = 12/29 (41%)

Query: 46 HTREKPYACPTCEFKTGDHNVLRKHVQRH 74
           + ++P+ C  C           +H++ H
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVH 30


>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 26

 Score = 26.0 bits (58), Expect = 0.17
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHT 47
          KP++C  CG    + + L  H R HT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26


>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 30

 Score = 26.1 bits (58), Expect = 0.20
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 22 KPFQC--PVCGFTTGRKATLQLHVRQHTRE 49
          KP +C    C  +  R   L+ H+R HT E
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30


>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 29

 Score = 26.2 bits (57), Expect = 0.21
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHT 47
          +PF+C +C + +   + L +H+R HT
Sbjct: 2  RPFKCQICPYASRNSSQLTVHLRSHT 27



 Score = 22.7 bits (48), Expect = 3.1
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query: 49 EKPYACPTCEFKTGDHNVLRKHVQRH 74
          E+P+ C  C + + + + L  H++ H
Sbjct: 1  ERPFKCQICPYASRNSSQLTVHLRSH 26


>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
          (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 32

 Score = 25.8 bits (57), Expect = 0.29
 Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 22 KPFQCPV--CGFTTGRKATLQLHVRQHTRE 49
          +P+ C    C     R   L  H + H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31


>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
          Length = 30

 Score = 25.1 bits (54), Expect = 0.40
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 78  KKYQCTFCSYSCTERFRLKDHTLAKHN 104
           K YQC +C +   +   LK H   KH+
Sbjct: 1   KTYQCQYCEFRSADSSNLKTHIKTKHS 27



 Score = 25.1 bits (54), Expect = 0.46
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 50 KPYACPTCEFKTGDHNVLRKHVQ 72
          K Y C  CEF++ D + L+ H++
Sbjct: 1  KTYQCQYCEFRSADSSNLKTHIK 23



 Score = 22.4 bits (47), Expect = 4.2
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVR-QHTREK 50
          K +QC  C F +   + L+ H++ +H++EK
Sbjct: 1  KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30


>d1hk8a_ c.7.1.3 (A:) Class III anaerobic ribonucleotide reductase
           NRDD subunit {Bacteriophage T4 [TaxId: 10665]}
          Length = 561

 Score = 26.8 bits (59), Expect = 0.51
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 17/63 (26%)

Query: 2   NFYADIKCLKKHIREVHKRLKPF-------QCPVCGFTTGRKATLQLHVRQHTREKPYAC 54
           +   ++K L+       + L  F       +C  CG T     T          E  + C
Sbjct: 487 DMKNNLKGLEAVWDYAAQHLDYFGVNMPVDKCFTCGSTHEMTPT----------ENGFVC 536

Query: 55  PTC 57
             C
Sbjct: 537 SIC 539


>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
          10090]}
          Length = 29

 Score = 24.6 bits (54), Expect = 0.62
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 22 KPFQC--PVCGFTTGRKATLQLHVRQHT 47
          +P+ C    C     R A L  H+R HT
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHT 28


>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
          domain) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 30

 Score = 24.3 bits (53), Expect = 0.75
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 22 KPFQC--PVCGFTTGRKATLQLHVRQHTRE 49
          KPFQC    CG        L+ HVR HT +
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30


>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 24.3 bits (52), Expect = 0.89
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 50 KPYACPTCEFKTGDHNVLRKHVQRH 74
          KPY C TC++   D + L KH++ H
Sbjct: 2  KPYKCKTCDYAAADSSSLNKHLRIH 26


>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 26

 Score = 23.9 bits (51), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 23 PFQCPVCGFTTGRKATLQLHVRQHT 47
          P +C VCG    RK  L+ H+R HT
Sbjct: 1  PHKCEVCGKCFSRKDKLKTHMRCHT 25


>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 29

 Score = 23.4 bits (50), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQ 45
          +PF+C  C F T + + L  H+++
Sbjct: 1  RPFKCNYCSFDTKQPSNLSKHMKK 24


>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
          {Desulfovibrio vulgaris [TaxId: 881]}
          Length = 36

 Score = 23.5 bits (51), Expect = 1.7
 Identities = 10/36 (27%), Positives = 12/36 (33%), Gaps = 13/36 (36%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTREKPYACPTC 57
          K   CP+CG+              H  E    CP C
Sbjct: 4  KFHLCPICGYI-------------HKGEDFEKCPIC 26


>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
          {Archaeon Pyrococcus furiosus [TaxId: 2261]}
          Length = 37

 Score = 23.5 bits (51), Expect = 1.8
 Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 13/36 (36%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTREKPYACPTC 57
          K + CP+CG+T                E P  CP C
Sbjct: 4  KVYICPICGYT-------------AVDEAPEYCPVC 26


>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
          (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 47

 Score = 23.7 bits (51), Expect = 2.0
 Identities = 8/41 (19%), Positives = 21/41 (51%)

Query: 10 LKKHIREVHKRLKPFQCPVCGFTTGRKATLQLHVRQHTREK 50
          + K+++E+  +      P C  T  R+  ++ H++ H  ++
Sbjct: 7  IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47



 Score = 22.2 bits (47), Expect = 6.0
 Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 3/44 (6%)

Query: 33 TGRKATLQLHVRQHTREKPYACPTCE--FKTGDHNVLRKHVQRH 74
          T  + ++  +V+    +K + C              +R H+Q H
Sbjct: 1  TLPRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43


>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 22.3 bits (47), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 24 FQCPVCGFTTGRKATLQLHVRQ 45
          F CP C     RK+ L +H+R+
Sbjct: 3  FHCPHCDTVIARKSDLGVHLRK 24


>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 22.4 bits (47), Expect = 4.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 23 PFQCPVCGFTTGRKATLQLHVRQHTRE 49
          P +C  C ++   KA L++H R H  +
Sbjct: 2  PEKCSECSYSCSSKAALRIHERIHCTD 28


>d1xjua_ d.2.1.3 (A:) Endolysin Lyz {Bacteriophage P1 [TaxId:
          10678]}
          Length = 158

 Score = 24.0 bits (51), Expect = 5.1
 Identities = 10/71 (14%), Positives = 20/71 (28%)

Query: 20 RLKPFQCPVCGFTTGRKATLQLHVRQHTREKPYACPTCEFKTGDHNVLRKHVQRHMPVKK 79
          R  P+ CP   +T G   T  +       ++  A    +        + +H +       
Sbjct: 17 RRDPYMCPAGVWTDGIGNTHGVTPGVRKTDQQIAADWEKNILIAERCINQHFRGKDMPDN 76

Query: 80 YQCTFCSYSCT 90
                S +  
Sbjct: 77 AFSAMTSAAFN 87


>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 28

 Score = 22.1 bits (47), Expect = 5.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 26 CPVCGFTTGRKATLQLHVRQHTREK 50
          C  CG    + + L+ H+R HT  +
Sbjct: 4  CEECGIRAKKPSMLKKHIRTHTDVR 28


>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White
           mustard (Sinapis alba) [TaxId: 3728]}
          Length = 499

 Score = 24.0 bits (51), Expect = 5.8
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 7   IKCLKKHIREVHKRLKPFQCPVCGFT 32
           I  L  H+  ++K +K     V G+ 
Sbjct: 428 IDYLCSHLCFLNKVIKEKDVNVKGYL 453


>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
          (Mus musculus) [TaxId: 10090]}
          Length = 30

 Score = 22.0 bits (46), Expect = 5.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 24 FQCPVCGFTTGRKATLQLHVRQHTRE 49
          F C VC  T  R+  L+LH+  HT E
Sbjct: 5  FTCSVCQETFRRRMELRLHMVSHTGE 30


>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
          (Mus musculus) [TaxId: 10090]}
          Length = 27

 Score = 22.0 bits (46), Expect = 6.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 25 QCPVCGFTTGRKATLQLHVRQHTREK 50
          +CP C      K  L++H R+HT EK
Sbjct: 2  ECPTCHKKFLSKYYLKVHNRKHTGEK 27


>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
          10090]}
          Length = 28

 Score = 21.7 bits (46), Expect = 8.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 22 KPFQCPVCGFTTGRKATLQLHVRQHTR 48
          KPF C +CG    R    + H + H R
Sbjct: 2  KPFACDICGRKFARSDERKRHTKIHLR 28


>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid
           (Brevicoryne brassicae) [TaxId: 69196]}
          Length = 462

 Score = 23.6 bits (50), Expect = 8.5
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 7   IKCLKKHIREVHKRLKPFQCPVCGFTT 33
           I  LK ++    + +   +C V G+T 
Sbjct: 387 ISYLKNYLNATLQAMYEDKCNVIGYTV 413


>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein
          1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 58

 Score = 22.1 bits (47), Expect = 8.6
 Identities = 7/19 (36%), Positives = 8/19 (42%)

Query: 24 FQCPVCGFTTGRKATLQLH 42
          + C  C F T R   L  H
Sbjct: 7  YVCVECNFLTKRYDALSEH 25


>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
          domain) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 21.5 bits (46), Expect = 8.8
 Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 2/28 (7%)

Query: 22 KPFQCPV--CGFTTGRKATLQLHVRQHT 47
          +P+ CP   C     +   L+ H+  H 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28


>d2ghfa2 g.37.1.1 (A:9-44) Zinc fingers and homeoboxes protein 1,
          ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 21.6 bits (45), Expect = 9.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 52 YACPTCEFKTGDHNVLRKHVQRHMP 76
          Y C  C F+T D N+   HV    P
Sbjct: 11 YECKYCTFQTPDLNMFTFHVDSEHP 35


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.138    0.466 

Gapped
Lambda     K      H
   0.267   0.0700    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 441,000
Number of extensions: 19254
Number of successful extensions: 235
Number of sequences better than 10.0: 1
Number of HSP's gapped: 229
Number of HSP's successfully gapped: 110
Length of query: 110
Length of database: 2,407,596
Length adjustment: 69
Effective length of query: 41
Effective length of database: 1,460,226
Effective search space: 59869266
Effective search space used: 59869266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (21.9 bits)