Your job contains 1 sequence.
>psy10279
MAMSQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTK
SLVMKCMIFLVNMELSDKLE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10279
(80 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BW94 - symbol:SF3B14 "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|Q2KIQ7 - symbol:SF3B14 "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|E2RRA3 - symbol:SF3B14 "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|Q9Y3B4 - symbol:SF3B14 "Pre-mRNA branch site pr... 249 3.0e-21 1
UNIPROTKB|F2Z5F1 - symbol:LOC100521960 "Uncharacterized p... 249 3.0e-21 1
MGI|MGI:1913305 - symbol:0610009D07Rik "RIKEN cDNA 061000... 249 3.0e-21 1
ZFIN|ZDB-GENE-040625-36 - symbol:sf3b14 "splicing factor ... 249 3.0e-21 1
FB|FBgn0035692 - symbol:CG13298 species:7227 "Drosophila ... 235 9.2e-20 1
WB|WBGene00016808 - symbol:C50D2.5 species:6239 "Caenorha... 215 1.2e-17 1
TAIR|locus:2177033 - symbol:AT5G12190 species:3702 "Arabi... 208 6.7e-17 1
GENEDB_PFALCIPARUM|PFL1200c - symbol:PFL1200c "hypothetic... 195 1.6e-15 1
UNIPROTKB|Q8I5G8 - symbol:PFL1200c "Splicing factor 3b su... 195 1.6e-15 1
DICTYBASE|DDB_G0286297 - symbol:DDB_G0286297 "putative sp... 178 1.0e-13 1
POMBASE|SPBC29A3.07c - symbol:sab14 "U2 snRNP-associated ... 158 1.3e-11 1
TAIR|locus:2060464 - symbol:AT2G14870 species:3702 "Arabi... 156 2.2e-11 1
UNIPROTKB|G4MTV6 - symbol:MGG_01579 "Pre-mRNA branch site... 143 5.2e-10 1
ASPGD|ASPL0000065410 - symbol:AN7456 species:162425 "Emer... 136 2.9e-09 1
CGD|CAL0000405 - symbol:orf19.6989 species:5476 "Candida ... 98 3.0e-05 1
UNIPROTKB|Q59YT4 - symbol:CSP14 "Putative uncharacterized... 98 3.0e-05 1
UNIPROTKB|I3LLT9 - symbol:ZCRB1 "Uncharacterized protein"... 96 5.0e-05 1
UNIPROTKB|J9NZ20 - symbol:ZCRB1 "Uncharacterized protein"... 96 0.00013 1
UNIPROTKB|Q8TBF4 - symbol:ZCRB1 "Zinc finger CCHC-type an... 96 0.00013 1
MGI|MGI:1914447 - symbol:Zcrb1 "zinc finger CCHC-type and... 96 0.00013 1
RGD|1309851 - symbol:Zcrb1 "zinc finger CCHC-type and RNA... 96 0.00013 1
UNIPROTKB|E1BTK3 - symbol:ZCRB1 "Uncharacterized protein"... 95 0.00016 1
UNIPROTKB|Q56JZ7 - symbol:ZCRB1 "Zinc finger CCHC-type an... 94 0.00022 1
>UNIPROTKB|E1BW94 [details] [associations]
symbol:SF3B14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005689
"U12-type spliceosomal complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005689
KO:K12833 OMA:YQSTKAF GeneTree:ENSGT00390000005908 CTD:51639
EMBL:AADN02018477 IPI:IPI00572573 RefSeq:XP_419986.1
UniGene:Gga.2001 ProteinModelPortal:E1BW94 SMR:E1BW94 PRIDE:E1BW94
Ensembl:ENSGALT00000026618 GeneID:421976 KEGG:gga:421976
NextBio:20824670 Uniprot:E1BW94
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>UNIPROTKB|Q2KIQ7 [details] [associations]
symbol:SF3B14 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000276232 GO:GO:0005689 KO:K12833 OMA:YQSTKAF
GeneTree:ENSGT00390000005908 CTD:51639 HOVERGEN:HBG039634
OrthoDB:EOG4X0MTT EMBL:DAAA02031677 EMBL:BC112548 IPI:IPI00698072
RefSeq:NP_001039482.1 UniGene:Bt.45988 SMR:Q2KIQ7 STRING:Q2KIQ7
Ensembl:ENSBTAT00000004418 GeneID:508876 KEGG:bta:508876
InParanoid:Q2KIQ7 NextBio:20868714 Uniprot:Q2KIQ7
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>UNIPROTKB|E2RRA3 [details] [associations]
symbol:SF3B14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005689
KO:K12833 OMA:YQSTKAF GeneTree:ENSGT00390000005908 CTD:51639
EMBL:AAEX03010780 RefSeq:XP_532889.1 ProteinModelPortal:E2RRA3
SMR:E2RRA3 PRIDE:E2RRA3 Ensembl:ENSCAFT00000006355 GeneID:475682
KEGG:cfa:475682 NextBio:20851470 Uniprot:E2RRA3
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>UNIPROTKB|Q9Y3B4 [details] [associations]
symbol:SF3B14 "Pre-mRNA branch site protein p14"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005689
"U12-type spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398 eggNOG:COG0724
HOGENOM:HOG000276232 GO:GO:0005689 KO:K12833 OMA:YQSTKAF
EMBL:AF401310 EMBL:AF151868 EMBL:AF161523 EMBL:AF184213
EMBL:BC015463 IPI:IPI00032827 RefSeq:NP_057131.1 UniGene:Hs.177861
PDB:2F9D PDB:2F9J PDB:2FHO PDB:3LQV PDBsum:2F9D PDBsum:2F9J
PDBsum:2FHO PDBsum:3LQV ProteinModelPortal:Q9Y3B4 SMR:Q9Y3B4
IntAct:Q9Y3B4 MINT:MINT-3085643 STRING:Q9Y3B4 PhosphoSite:Q9Y3B4
DMDM:12585536 PaxDb:Q9Y3B4 PeptideAtlas:Q9Y3B4 PRIDE:Q9Y3B4
DNASU:51639 GeneID:51639 KEGG:hsa:51639 UCSC:uc002rev.3 CTD:51639
GeneCards:GC02M024290 HPA:HPA034829 HPA:HPA034830 MIM:607835
neXtProt:NX_Q9Y3B4 HOVERGEN:HBG039634 InParanoid:Q9Y3B4
OrthoDB:EOG4X0MTT PhylomeDB:Q9Y3B4 EvolutionaryTrace:Q9Y3B4
GenomeRNAi:51639 NextBio:55577 ArrayExpress:Q9Y3B4 Bgee:Q9Y3B4
Genevestigator:Q9Y3B4 GermOnline:ENSG00000115128 Uniprot:Q9Y3B4
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>UNIPROTKB|F2Z5F1 [details] [associations]
symbol:LOC100521960 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005689
KO:K12833 OMA:YQSTKAF GeneTree:ENSGT00390000005908 EMBL:CU928810
RefSeq:XP_003125412.1 ProteinModelPortal:F2Z5F1 SMR:F2Z5F1
PRIDE:F2Z5F1 Ensembl:ENSSSCT00000009397 GeneID:100521960
KEGG:ssc:100521960 Uniprot:F2Z5F1
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>MGI|MGI:1913305 [details] [associations]
symbol:0610009D07Rik "RIKEN cDNA 0610009D07 gene"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1913305
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000276232 GO:GO:0005689
KO:K12833 OMA:YQSTKAF GeneTree:ENSGT00390000005908
HOVERGEN:HBG039634 OrthoDB:EOG4X0MTT EMBL:AK002375 EMBL:AK003683
EMBL:AK151648 EMBL:BC019535 IPI:IPI00117687 RefSeq:NP_079599.1
UniGene:Mm.102627 ProteinModelPortal:P59708 SMR:P59708
STRING:P59708 PhosphoSite:P59708 PaxDb:P59708 PRIDE:P59708
Ensembl:ENSMUST00000046207 GeneID:66055 KEGG:mmu:66055
UCSC:uc007myi.1 InParanoid:P59708 NextBio:320494 Bgee:P59708
CleanEx:MM_0610009D07RIK Genevestigator:P59708
GermOnline:ENSMUSG00000037361 Uniprot:P59708
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>ZFIN|ZDB-GENE-040625-36 [details] [associations]
symbol:sf3b14 "splicing factor 3B" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040625-36 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000276232 KO:K12833
OMA:YQSTKAF GeneTree:ENSGT00390000005908 CTD:51639
HOVERGEN:HBG039634 OrthoDB:EOG4X0MTT EMBL:BX510920 EMBL:BC071385
IPI:IPI00495681 RefSeq:NP_001002067.1 UniGene:Dr.3658 SMR:Q6IQM0
STRING:Q6IQM0 Ensembl:ENSDART00000017485 GeneID:415157
KEGG:dre:415157 InParanoid:Q6IQM0 NextBio:20818830 Uniprot:Q6IQM0
Length = 125
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 1 MAM-SQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM + +RAN+RLPPEVNR+LYIRNLPYKIT +EMYDIFGKYG IRQIR+GNTP+TR
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETR 57
>FB|FBgn0035692 [details] [associations]
symbol:CG13298 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0005686 "U2 snRNP"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014296 GO:GO:0007052
GO:GO:0022008 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 KO:K12833
OMA:YQSTKAF GeneTree:ENSGT00390000005908 EMBL:AY089603
RefSeq:NP_648037.1 UniGene:Dm.1519 ProteinModelPortal:Q9VRV7
SMR:Q9VRV7 DIP:DIP-21174N IntAct:Q9VRV7 MINT:MINT-921416
STRING:Q9VRV7 PaxDb:Q9VRV7 PRIDE:Q9VRV7 EnsemblMetazoa:FBtr0077015
GeneID:38720 KEGG:dme:Dmel_CG13298 UCSC:CG13298-RA
FlyBase:FBgn0035692 InParanoid:Q9VRV7 OrthoDB:EOG4DV43Q
PhylomeDB:Q9VRV7 GenomeRNAi:38720 NextBio:810039 Bgee:Q9VRV7
GermOnline:CG13298 Uniprot:Q9VRV7
Length = 121
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 41/51 (80%), Positives = 49/51 (96%)
Query: 6 RRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
+R ++RLPPEVNR+LY+RNLPYKIT DEMYDIFGK+GAIRQIR+GNTP+TR
Sbjct: 3 KRNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETR 53
>WB|WBGene00016808 [details] [associations]
symbol:C50D2.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0000003 GO:GO:0003723 EMBL:FO080633 eggNOG:COG0724
HOGENOM:HOG000276232 KO:K12833 OMA:YQSTKAF RefSeq:NP_493659.3
ProteinModelPortal:Q8ITY4 SMR:Q8ITY4 STRING:Q8ITY4 PaxDb:Q8ITY4
EnsemblMetazoa:C50D2.5 GeneID:173394 KEGG:cel:CELE_C50D2.5
UCSC:C50D2.5 CTD:173394 WormBase:C50D2.5
GeneTree:ENSGT00390000005908 InParanoid:Q8ITY4 NextBio:879467
Uniprot:Q8ITY4
Length = 138
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 1 MAMSQRR-ANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
MAM+ R+ +LPPEVNR+LYI+NLPYKIT +EMY+IFGK+GA+RQIR+GNT +TR
Sbjct: 1 MAMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETR 57
>TAIR|locus:2177033 [details] [associations]
symbol:AT5G12190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 EMBL:AB007727 HOGENOM:HOG000276232 EMBL:BT002829
EMBL:BT004430 EMBL:AY088716 IPI:IPI00520700 RefSeq:NP_196780.1
UniGene:At.32166 ProteinModelPortal:Q9FMP4 SMR:Q9FMP4 IntAct:Q9FMP4
STRING:Q9FMP4 PaxDb:Q9FMP4 PRIDE:Q9FMP4 EnsemblPlants:AT5G12190.1
GeneID:831092 KEGG:ath:AT5G12190 TAIR:At5g12190 InParanoid:Q9FMP4
KO:K12833 OMA:YQSTKAF PhylomeDB:Q9FMP4 ProtClustDB:CLSN2686825
Genevestigator:Q9FMP4 GermOnline:AT5G12190 Uniprot:Q9FMP4
Length = 124
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 3 MSQRRANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIG 50
+S R++N RLPPEVNRVLY+RNLP+ IT +EMYDIFGKYGAIRQIRIG
Sbjct: 4 ISLRKSNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIG 51
>GENEDB_PFALCIPARUM|PFL1200c [details] [associations]
symbol:PFL1200c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE014188
HSSP:P19339 HOGENOM:HOG000276232 KO:K12833 OMA:YQSTKAF
RefSeq:XP_001350646.1 ProteinModelPortal:Q8I5G8 SMR:Q8I5G8
PRIDE:Q8I5G8 EnsemblProtists:PFL1200c:mRNA GeneID:811292
KEGG:pfa:PFL1200c EuPathDB:PlasmoDB:PF3D7_1224900
ProtClustDB:CLSZ2433715 Uniprot:Q8I5G8
Length = 106
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 RANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
R N+RLP EV+R+LY+RNLPYKI+ DE+YDIFGKYG +RQIR GN T+
Sbjct: 3 RRNIRLPAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTK 52
>UNIPROTKB|Q8I5G8 [details] [associations]
symbol:PFL1200c "Splicing factor 3b subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE014188
HSSP:P19339 HOGENOM:HOG000276232 KO:K12833 OMA:YQSTKAF
RefSeq:XP_001350646.1 ProteinModelPortal:Q8I5G8 SMR:Q8I5G8
PRIDE:Q8I5G8 EnsemblProtists:PFL1200c:mRNA GeneID:811292
KEGG:pfa:PFL1200c EuPathDB:PlasmoDB:PF3D7_1224900
ProtClustDB:CLSZ2433715 Uniprot:Q8I5G8
Length = 106
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 RANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
R N+RLP EV+R+LY+RNLPYKI+ DE+YDIFGKYG +RQIR GN T+
Sbjct: 3 RRNIRLPAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTK 52
>DICTYBASE|DDB_G0286297 [details] [associations]
symbol:DDB_G0286297 "putative splicing factor 3B 14
kDa subunit" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0286297 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000085 eggNOG:COG0724
KO:K12833 OMA:YQSTKAF RefSeq:XP_637842.1 ProteinModelPortal:Q54LY9
SMR:Q54LY9 STRING:Q54LY9 EnsemblProtists:DDB0233775 GeneID:8625556
KEGG:ddi:DDB_G0286297 InParanoid:Q54LY9 Uniprot:Q54LY9
Length = 117
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 29/45 (64%), Positives = 40/45 (88%)
Query: 11 RLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDT 55
+LPPE+NR+LY++NLP+KI+ +E+Y IF YGAIRQIR+GNT +T
Sbjct: 9 KLPPEINRILYVKNLPFKISSEELYGIFSNYGAIRQIRLGNTTET 53
>POMBASE|SPBC29A3.07c [details] [associations]
symbol:sab14 "U2 snRNP-associated protein SF3B14
ortholog (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000384 "first spliceosomal transesterification activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISM] [GO:0005681
"spliceosomal complex" evidence=NAS] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 PomBase:SPBC29A3.07c GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0005686 eggNOG:COG0724 GO:GO:0045292 HOGENOM:HOG000276232
PIR:T40078 HSSP:Q9Y3B4 ProteinModelPortal:O59670 IntAct:O59670
STRING:O59670 OrthoDB:EOG4HB1W3 NextBio:20801589 GO:GO:0000384
Uniprot:O59670
Length = 115
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 27/42 (64%), Positives = 36/42 (85%)
Query: 15 EVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
EVN +L+I+NL +KIT +EMYD+FG+YG +RQIR+GNT TR
Sbjct: 9 EVNSILFIKNLSFKITAEEMYDLFGRYGPVRQIRLGNTVQTR 50
>TAIR|locus:2060464 [details] [associations]
symbol:AT2G14870 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:AC005396 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 eggNOG:COG0724
KO:K12833 IPI:IPI00539874 PIR:D84522 RefSeq:NP_179093.1
UniGene:At.52745 ProteinModelPortal:O82325 SMR:O82325 STRING:O82325
EnsemblPlants:AT2G14870.1 GeneID:815976 KEGG:ath:AT2G14870
TAIR:At2g14870 InParanoid:O82325 PhylomeDB:O82325
Genevestigator:O82325 Uniprot:O82325
Length = 101
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 7 RANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
+ N RLPPEV R+LYI NLP+ IT ++ YD+FG+Y IRQ+RIG T+
Sbjct: 9 KQNPRLPPEVTRLLYICNLPFSITSEDTYDLFGRYSTIRQVRIGCEKGTK 58
>UNIPROTKB|G4MTV6 [details] [associations]
symbol:MGG_01579 "Pre-mRNA branch site protein p14"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CM001232 KO:K12833 RefSeq:XP_003714557.1
ProteinModelPortal:G4MTV6 SMR:G4MTV6 EnsemblFungi:MGG_01579T0
GeneID:2679525 KEGG:mgr:MGG_01579 Uniprot:G4MTV6
Length = 115
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 11 RLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIG---NTPDTRYLTKSLVM 64
+L PEVNR L+++NL Y +T +E++D+FGK+G IRQ+R G NT T ++ VM
Sbjct: 6 KLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASNTKGTAFVVYEDVM 62
>ASPGD|ASPL0000065410 [details] [associations]
symbol:AN7456 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AACD01000129 EMBL:BN001304 eggNOG:COG0724
HOGENOM:HOG000276232 KO:K12833 OrthoDB:EOG4HB1W3 RefSeq:XP_680725.1
ProteinModelPortal:Q5AW74 SMR:Q5AW74 STRING:Q5AW74
EnsemblFungi:CADANIAT00000549 GeneID:2869562 KEGG:ani:AN7456.2
Uniprot:Q5AW74
Length = 172
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 22/44 (50%), Positives = 35/44 (79%)
Query: 7 RANVRLPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIG 50
R + +L PE NR+L+++NL Y +T ++++D+FGK+G IRQIR G
Sbjct: 59 RMSRKLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQG 102
>CGD|CAL0000405 [details] [associations]
symbol:orf19.6989 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 CGD:CAL0000405 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000098 eggNOG:COG0724
HOGENOM:HOG000276232 KO:K12833 RefSeq:XP_714695.1
ProteinModelPortal:Q59YT4 STRING:Q59YT4 GeneID:3643658
KEGG:cal:CaO19.6989 Uniprot:Q59YT4
Length = 107
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 19 VLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNT-PDTRYL 58
++ ++NLPY + +Y+ FGKYG I QIRI ++ P T ++
Sbjct: 8 IVSVKNLPYNTSNSSLYEFFGKYGYINQIRINSSQPGTCFI 48
>UNIPROTKB|Q59YT4 [details] [associations]
symbol:CSP14 "Putative uncharacterized protein CSP14"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 CGD:CAL0000405 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000098 eggNOG:COG0724
HOGENOM:HOG000276232 KO:K12833 RefSeq:XP_714695.1
ProteinModelPortal:Q59YT4 STRING:Q59YT4 GeneID:3643658
KEGG:cal:CaO19.6989 Uniprot:Q59YT4
Length = 107
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 19 VLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNT-PDTRYL 58
++ ++NLPY + +Y+ FGKYG I QIRI ++ P T ++
Sbjct: 8 IVSVKNLPYNTSNSSLYEFFGKYGYINQIRINSSQPGTCFI 48
>UNIPROTKB|I3LLT9 [details] [associations]
symbol:ZCRB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005689
GeneTree:ENSGT00600000084414 EMBL:CU915556
Ensembl:ENSSSCT00000027399 OMA:SINGKEM Uniprot:I3LLT9
Length = 94
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>UNIPROTKB|J9NZ20 [details] [associations]
symbol:ZCRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00343 SMART:SM00360
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 Gene3D:4.10.60.10 GeneTree:ENSGT00600000084414
CTD:85437 KO:K13154 OMA:RXVTIMK EMBL:AAEX03015129
RefSeq:XP_534835.1 ProteinModelPortal:J9NZ20
Ensembl:ENSCAFT00000049381 GeneID:477640 KEGG:cfa:477640
Uniprot:J9NZ20
Length = 217
Score = 96 (38.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>UNIPROTKB|Q8TBF4 [details] [associations]
symbol:ZCRB1 "Zinc finger CCHC-type and RNA-binding
motif-containing protein 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IDA] [GO:0008380 "RNA splicing" evidence=IC]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 SMART:SM00360 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471111 Gene3D:4.10.60.10
HOVERGEN:HBG107480 GO:GO:0005689 CTD:85437 HOGENOM:HOG000007632
KO:K13154 OMA:RXVTIMK OrthoDB:EOG4GXFNW eggNOG:NOG270852
EMBL:AB062361 EMBL:BC010177 EMBL:BC022543 EMBL:BK005200
IPI:IPI00154614 RefSeq:NP_149105.3 UniGene:Hs.496279 PDB:2E5H
PDBsum:2E5H ProteinModelPortal:Q8TBF4 SMR:Q8TBF4 STRING:Q8TBF4
PhosphoSite:Q8TBF4 DMDM:158931154 PRIDE:Q8TBF4 DNASU:85437
Ensembl:ENST00000266529 GeneID:85437 KEGG:hsa:85437 UCSC:uc001rmz.3
GeneCards:GC12M042705 HGNC:HGNC:29620 HPA:HPA038864 MIM:610750
neXtProt:NX_Q8TBF4 PharmGKB:PA143485674 InParanoid:Q8TBF4
PhylomeDB:Q8TBF4 EvolutionaryTrace:Q8TBF4 GenomeRNAi:85437
NextBio:76004 ArrayExpress:Q8TBF4 Bgee:Q8TBF4 CleanEx:HS_ZCRB1
Genevestigator:Q8TBF4 GermOnline:ENSG00000139168 Uniprot:Q8TBF4
Length = 217
Score = 96 (38.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>MGI|MGI:1914447 [details] [associations]
symbol:Zcrb1 "zinc finger CCHC-type and RNA binding motif 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00343 SMART:SM00360
MGI:MGI:1914447 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 Gene3D:4.10.60.10 HOVERGEN:HBG107480 GO:GO:0005689
GeneTree:ENSGT00600000084414 HSSP:Q7YZ92 CTD:85437
HOGENOM:HOG000007632 KO:K13154 OMA:RXVTIMK OrthoDB:EOG4GXFNW
eggNOG:NOG270852 EMBL:AB095989 EMBL:AK012852 EMBL:AK170136
EMBL:BC058368 IPI:IPI00112291 IPI:IPI00798500 RefSeq:NP_080301.1
UniGene:Mm.293181 ProteinModelPortal:Q9CZ96 SMR:Q9CZ96
STRING:Q9CZ96 PhosphoSite:Q9CZ96 PRIDE:Q9CZ96
Ensembl:ENSMUST00000076070 Ensembl:ENSMUST00000162160 GeneID:67197
KEGG:mmu:67197 UCSC:uc007xiu.1 UCSC:uc007xiv.1 InParanoid:Q9CZ96
ChiTaRS:ZCRB1 NextBio:323848 Bgee:Q9CZ96 CleanEx:MM_ZCRB1
Genevestigator:Q9CZ96 GermOnline:ENSMUSG00000022635 Uniprot:Q9CZ96
Length = 217
Score = 96 (38.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>RGD|1309851 [details] [associations]
symbol:Zcrb1 "zinc finger CCHC-type and RNA binding motif 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005689 "U12-type spliceosomal
complex" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00343 SMART:SM00360
RGD:1309851 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
Gene3D:4.10.60.10 HOVERGEN:HBG107480 GO:GO:0005689
GeneTree:ENSGT00600000084414 HSSP:P62995 CTD:85437
HOGENOM:HOG000007632 KO:K13154 OMA:RXVTIMK OrthoDB:EOG4GXFNW
eggNOG:NOG270852 EMBL:BC099747 IPI:IPI00211761
RefSeq:NP_001030112.1 UniGene:Rn.136969 ProteinModelPortal:Q499V6
SMR:Q499V6 STRING:Q499V6 Ensembl:ENSRNOT00000006780 GeneID:362990
KEGG:rno:362990 InParanoid:Q499V6 NextBio:682050
Genevestigator:Q499V6 GermOnline:ENSRNOG00000004996 Uniprot:Q499V6
Length = 217
Score = 96 (38.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>UNIPROTKB|E1BTK3 [details] [associations]
symbol:ZCRB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
Gene3D:4.10.60.10 GO:GO:0005689 GeneTree:ENSGT00600000084414
CTD:85437 KO:K13154 OMA:RXVTIMK EMBL:AADN02010031 IPI:IPI00592809
RefSeq:XP_416034.1 ProteinModelPortal:E1BTK3
Ensembl:ENSGALT00000015532 GeneID:417791 KEGG:gga:417791
NextBio:20821039 Uniprot:E1BTK3
Length = 216
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTRYLTKSLVMKCMIFL 70
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR KS + ++FL
Sbjct: 5 LAPSKSTV-YVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTR---KSKGVAFILFL 59
>UNIPROTKB|Q56JZ7 [details] [associations]
symbol:ZCRB1 "Zinc finger CCHC-type and RNA-binding
motif-containing protein 1" species:9913 "Bos taurus" [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005689 "U12-type spliceosomal
complex" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00343 SMART:SM00360
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
Gene3D:4.10.60.10 eggNOG:COG0724 HOVERGEN:HBG107480 GO:GO:0005689
GeneTree:ENSGT00600000084414 HSSP:Q7YZ92 EMBL:AY911330
EMBL:BC109899 IPI:IPI00690660 RefSeq:NP_001020489.1
UniGene:Bt.48372 ProteinModelPortal:Q56JZ7 SMR:Q56JZ7 STRING:Q56JZ7
Ensembl:ENSBTAT00000025452 GeneID:504536 KEGG:bta:504536 CTD:85437
HOGENOM:HOG000007632 InParanoid:Q56JZ7 KO:K13154 OMA:RXVTIMK
OrthoDB:EOG4GXFNW NextBio:20866714 Uniprot:Q56JZ7
Length = 217
Score = 94 (38.1 bits), Expect = 0.00022, P = 0.00022
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 12 LPPEVNRVLYIRNLPYKITGDEMYDIFGKYGAIRQIRIGNTPDTR 56
L P + V Y+ NLP+ +T +++Y IF KYG + ++ I DTR
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTR 48
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.141 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 80 80 0.00091 102 3 11 22 0.50 28
29 0.41 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 456 (49 KB)
Total size of DFA: 82 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 8.94u 0.08s 9.02t Elapsed: 00:00:28
Total cpu time: 8.94u 0.08s 9.02t Elapsed: 00:00:29
Start: Thu Aug 15 14:25:25 2013 End: Thu Aug 15 14:25:54 2013