BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10284
         (103 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1 SV=1
          Length = 465

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ ++DVRK+F PFGTI+ECTVL+GPDGTSK
Sbjct: 94  DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSK 135



 Score = 34.7 bits (78), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 60 PPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P   KLFVG + +   E D++ IF  FG I E TV+K
Sbjct: 4  PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIK 40


>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2 SV=1
          Length = 465

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ ++DVRK+F PFGTI+ECTVL+GPDGTSK
Sbjct: 93  DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSK 134



 Score = 34.7 bits (78), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 60 PPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P   KLFVG + +   E D++ IF  FG I E TV+K
Sbjct: 4  PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIK 40


>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2 SV=2
          Length = 486

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)

Query: 55  TCTPLPP--DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           +C   PP  D+KLFVGML+KQQ+EDDVR++F  FG IEECT+L+GPDG SK
Sbjct: 142 SCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK 192



 Score = 35.0 bits (79), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +  +E D++ +F  FG I E TVLK
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 87


>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1 SV=1
          Length = 486

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)

Query: 55  TCTPLPP--DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           +C   PP  D+KLFVGML+KQQ+EDDVR++F  FG IEECT+L+GPDG SK
Sbjct: 142 SCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK 192



 Score = 35.0 bits (79), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +  +E D++ +F  FG I E TVLK
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 87


>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
          Length = 461

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/42 (78%), Positives = 39/42 (92%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ ++DVRK+F PFGTI+ECTVL+GPDGTSK
Sbjct: 94  DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSK 135



 Score = 34.7 bits (78), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 60 PPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P   KLFVG + +   E D++ IF  FG I E TV+K
Sbjct: 4  PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIK 40


>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1 SV=2
          Length = 486

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)

Query: 55  TCTPLPP--DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           +C   PP  D+KLFVGML+KQQ+EDDVR++F  FG IEECT+L+GPDG SK
Sbjct: 142 SCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK 192



 Score = 35.0 bits (79), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +  +E D++ +F  FG I E TVLK
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 87


>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a PE=2
           SV=2
          Length = 462

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 38/42 (90%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ ++DVR++F PFG I+ECTVL+GPDGTSK
Sbjct: 94  DRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSK 135



 Score = 36.2 bits (82), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 60 PPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P   KLF+G + +  +E D++ IF  FG I E TV+K
Sbjct: 4  PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIK 40


>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2 SV=1
          Length = 460

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/42 (76%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ E+DVR++F PFG IEECTVL+ PDGTSK
Sbjct: 133 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSK 174



 Score = 35.0 bits (79), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLFVG + +  +E D++ +F  FG I E TVLK
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 79


>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
           PE=2 SV=1
          Length = 474

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 38/42 (90%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML+KQQ+EDDVR++F  FG IEECT+L+GPDG SK
Sbjct: 140 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSK 181



 Score = 35.0 bits (79), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +  +E D++ +F  FG I E TVLK
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLK 87


>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
          Length = 520

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 38/42 (90%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML+KQQ EDDVR++F  FG+IEECT+L+GPDG SK
Sbjct: 134 DRKLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGPDGNSK 175



 Score = 37.0 bits (84), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +  +E D+R +F  FG I E TVLK
Sbjct: 48 KLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLK 80


>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1 SV=1
          Length = 481

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/42 (76%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ E+DVR++F PFG IEECTVL+ PDGTSK
Sbjct: 133 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSK 174



 Score = 34.3 bits (77), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLFVG + +  +E D++ +F  FG I E TVLK
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLK 79


>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
          Length = 452

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQ ++ DVRK+F PFG+IEECTVL+GPDG SK
Sbjct: 93  DRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASK 134



 Score = 34.7 bits (78), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G + +   E D++ IF  FG I E TV+K
Sbjct: 8  KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIK 40


>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b PE=2
           SV=1
          Length = 462

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/42 (71%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML KQQ ++DVR++F  FG I+ECTVL+GPDGTSK
Sbjct: 94  DRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSK 135



 Score = 35.8 bits (81), Expect = 0.077,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 60 PPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P   KLF+G + +  +E D++ IF  FG I E TV+K
Sbjct: 4  PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIK 40


>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1
          Length = 485

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/42 (71%), Positives = 39/42 (92%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGML+KQQ+E+DV ++F PFG I+ECTVL+GPDG+SK
Sbjct: 133 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSK 174



 Score = 37.4 bits (85), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          KLFVG + +  +E D++ +F  FG I E TVLK P
Sbjct: 46 KLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDP 80


>sp|O57406|CEL1A_XENLA CUGBP Elav-like family member 1-A OS=Xenopus laevis GN=cugbp1-a
           PE=1 SV=1
          Length = 489

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 36/42 (85%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK  NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGMSR 148


>sp|A4IIM2|CELF2_XENTR CUGBP Elav-like family member 2 OS=Xenopus tropicalis GN=celf2 PE=2
           SV=1
          Length = 513

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 126 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 167



 Score = 33.9 bits (76), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++ +F P+G + +  VL+
Sbjct: 30 PDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLR 68


>sp|Q7ZXE2|CELF2_XENLA CUGBP Elav-like family member 2 OS=Xenopus laevis GN=celf2 PE=1
           SV=1
          Length = 536

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 149 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 190



 Score = 33.9 bits (76), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++ +F P+G + +  VL+
Sbjct: 53 PDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLR 91


>sp|Q792H5|CELF2_RAT CUGBP Elav-like family member 2 OS=Rattus norvegicus GN=Celf2 PE=2
           SV=1
          Length = 508

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 131 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 172



 Score = 34.3 bits (77), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 25/39 (64%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++++F P+G + +  VL+
Sbjct: 35 PDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLR 73


>sp|Q5R8Y8|CELF2_PONAB CUGBP Elav-like family member 2 OS=Pongo abelii GN=CELF2 PE=2 SV=2
          Length = 508

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 131 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 172



 Score = 34.3 bits (77), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 25/39 (64%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++++F P+G + +  VL+
Sbjct: 35 PDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLR 73


>sp|Q9Z0H4|CELF2_MOUSE CUGBP Elav-like family member 2 OS=Mus musculus GN=Celf2 PE=1 SV=1
          Length = 508

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 131 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 172



 Score = 34.3 bits (77), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 25/39 (64%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++++F P+G + +  VL+
Sbjct: 35 PDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLR 73


>sp|O95319|CELF2_HUMAN CUGBP Elav-like family member 2 OS=Homo sapiens GN=CELF2 PE=1 SV=1
          Length = 508

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 131 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 172



 Score = 34.3 bits (77), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 25/39 (64%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++++F P+G + +  VL+
Sbjct: 35 PDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLR 73


>sp|Q7T2T1|CELF2_CHICK CUGBP Elav-like family member 2 OS=Gallus gallus GN=CELF2 PE=1 SV=2
          Length = 484

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 148



 Score = 33.1 bits (74), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 24/39 (61%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K FVG + +  +E +++++F P+G + +  VL+
Sbjct: 11 PDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLR 49


>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1 SV=2
          Length = 489

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+PFG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDGLSR 148



 Score = 31.2 bits (69), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 58 PLPPDK---KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P  PD    K+FVG + +   E D+R++F  +G + E  VL+
Sbjct: 8  PDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLR 49


>sp|Q9IBD0|CELF1_DANRE CUGBP Elav-like family member 1 OS=Danio rerio GN=celf1 PE=1 SV=1
          Length = 501

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGM+SK+ NE+D+R +F+P+G IEEC +L+GPDG S+
Sbjct: 107 DRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR 148



 Score = 36.2 bits (82), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          K+FVG + +  +ED +R++F P+G + E  VL+
Sbjct: 17 KMFVGQIPRTWSEDQLRELFEPYGAVYEINVLR 49


>sp|Q6P0B1|CELF2_DANRE CUGBP Elav-like family member 2 OS=Danio rerio GN=celf2 PE=2 SV=1
          Length = 514

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/42 (59%), Positives = 37/42 (88%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+P+G IEEC +L+GPDG S+
Sbjct: 135 DRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDGLSR 176



 Score = 33.9 bits (76), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 25/39 (64%)

Query: 58 PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P P   K+FVG + +  +E +++++F P+G + +  +L+
Sbjct: 39 PDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILR 77


>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2
           SV=1
          Length = 486

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/42 (69%), Positives = 38/42 (90%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGMLSKQQ+E++V  +F  FG+IEEC+VL+GPDG+SK
Sbjct: 134 DRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSK 175



 Score = 33.9 bits (76), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLFVG + +   E D++ +F  FG I E TVLK
Sbjct: 48 KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLK 80


>sp|Q4QQT3|CELF1_RAT CUGBP Elav-like family member 1 OS=Rattus norvegicus GN=Celf1 PE=2
           SV=1
          Length = 487

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 35/42 (83%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+  E+D+R +F+ FG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSR 148



 Score = 32.0 bits (71), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 58 PLPPDK---KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P  PD    K+FVG + +  +E D+R++F  +G + E  +L+
Sbjct: 8  PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILR 49


>sp|P28659|CELF1_MOUSE CUGBP Elav-like family member 1 OS=Mus musculus GN=Celf1 PE=1 SV=2
          Length = 486

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 35/42 (83%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+  E+D+R +F+ FG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSR 148



 Score = 32.0 bits (71), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 58 PLPPDK---KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P  PD    K+FVG + +  +E D+R++F  +G + E  +L+
Sbjct: 8  PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILR 49


>sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1 SV=2
          Length = 486

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 35/42 (83%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+  E+D+R +F+ FG IEEC +L+GPDG S+
Sbjct: 107 DRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSR 148



 Score = 32.7 bits (73), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 58 PLPPDK---KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P  PD    K+FVG + +  +E D+R++F  +G + E  VL+
Sbjct: 8  PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLR 49


>sp|Q28HE9|CELF1_XENTR CUGBP Elav-like family member 1 OS=Xenopus tropicalis GN=celf1 PE=2
           SV=1
          Length = 490

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/42 (59%), Positives = 35/42 (83%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLFVGM+SK+ NE+D+R +F+ FG IEE  +L+GPDG S+
Sbjct: 107 DRKLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGPDGMSR 148


>sp|Q6PF35|CEL1B_XENLA CUGBP Elav-like family member 1-B OS=Xenopus laevis GN=cugbp1-b
           PE=2 SV=1
          Length = 489

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 35/42 (83%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+ NE+D+R +F+ FG IEE  +L+GPDG S+
Sbjct: 107 DRKLFIGMVSKKCNENDIRTLFSQFGQIEESRILRGPDGMSR 148


>sp|Q5R995|CELF1_PONAB CUGBP Elav-like family member 1 OS=Pongo abelii GN=CELF1 PE=2 SV=1
          Length = 513

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 34/42 (80%)

Query: 62  DKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           D+KLF+GM+SK+  E+D+R +F+ FG IEEC +L GPDG S+
Sbjct: 134 DRKLFIGMISKKCTENDIRVMFSSFGQIEECRILWGPDGLSR 175



 Score = 32.3 bits (72), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 58 PLPPDK---KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          P  PD    K+FVG + +  +E D+R++F  +G + E  VL+
Sbjct: 35 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLR 76


>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2
          PE=1 SV=1
          Length = 328

 Score = 39.3 bits (90), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          K+F+G LS Q + D +R  F+ FG I EC V++ P
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDP 56



 Score = 30.4 bits (67), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVL 95
           KK+FVG LS     +DV++ F  FG +E+  ++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 142


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
           PE=2 SV=1
          Length = 660

 Score = 39.3 bits (90), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 25/90 (27%)

Query: 16  DKKLFVGMLSKQQNE--DDNLSHCFHLLFPHLQCFPWDLIWTCTPLPPDKKLFVGMLSKQ 73
           DK++FVG   ++Q    D+N                       TP P    ++V  L K+
Sbjct: 203 DKQVFVGHFIRRQERARDEN-----------------------TPTPRFTNVYVKNLPKE 239

Query: 74  QNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
             ED++RK F  FG I    V++   G S+
Sbjct: 240 IGEDELRKTFGKFGVISSAVVMRDQSGNSR 269


>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2
          PE=1 SV=1
          Length = 346

 Score = 38.9 bits (89), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          K+F+G LS Q + D +R  F+ FG I EC V++ P
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDP 56



 Score = 30.4 bits (67), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVL 95
           KK+FVG LS     +DV++ F  FG +E+  ++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 142


>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
           PE=1 SV=1
          Length = 629

 Score = 38.9 bits (89), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 27/39 (69%)

Query: 65  LFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           L+V  L    +++ +++IF+PFGT+    V++ P+GTSK
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSK 358



 Score = 30.0 bits (66), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 65  LFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
           ++V  L++   +DD++  F  +G I    V+K  +G SK
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSK 255


>sp|Q924M5|BOLL_MOUSE Protein boule-like OS=Mus musculus GN=Boll PE=2 SV=2
          Length = 281

 Score = 38.1 bits (87), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 27/41 (65%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
            ++FVG +  + NE+D+RK F+ +G+++E  ++    G SK
Sbjct: 33  NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSK 73


>sp|Q8N9W6|BOLL_HUMAN Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV=2
          Length = 283

 Score = 37.7 bits (86), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
            ++FVG +  + NE D+RK F+ +G+++E  ++    G SK
Sbjct: 33  NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSK 73


>sp|Q8WP23|BOLL_MACFA Protein boule-like OS=Macaca fascicularis GN=BOLL PE=2 SV=2
          Length = 283

 Score = 37.7 bits (86), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPDGTSK 103
            ++FVG +  + NE D+RK F+ +G+++E  ++    G SK
Sbjct: 33  NRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSK 73


>sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens
          GN=HNRNPA1L2 PE=2 SV=2
          Length = 320

 Score = 37.0 bits (84), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 55 TCTPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          + +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 4  SASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|Q94901|LARK_DROME RNA-binding protein lark OS=Drosophila melanogaster GN=lark PE=1
           SV=1
          Length = 352

 Score = 37.0 bits (84), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 25/39 (64%)

Query: 58  PLPPDKKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
           P  P  K+FVG L+ +    +VR++F  +GT+ EC +++
Sbjct: 81  PNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR 119



 Score = 33.9 bits (76), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLK 96
          KLF+G L ++    ++R +F  +GT+ EC V+K
Sbjct: 8  KLFIGNLDEKTQATELRALFEKYGTVVECDVVK 40


>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus
          GN=Msi1 PE=2 SV=1
          Length = 362

 Score = 37.0 bits (84), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          K+F+G LS Q  ++ +R+ F  FG ++EC V++ P
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDP 55


>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1
          PE=1 SV=1
          Length = 362

 Score = 37.0 bits (84), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          K+F+G LS Q  ++ +R+ F  FG ++EC V++ P
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDP 55


>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1
          PE=1 SV=1
          Length = 362

 Score = 37.0 bits (84), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 24/35 (68%)

Query: 64 KLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGP 98
          K+F+G LS Q  ++ +R+ F  FG ++EC V++ P
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDP 55



 Score = 28.9 bits (63), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 63  KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVL 95
           KK+FVG LS     +DV++ F  FG +++  ++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 141


>sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus
          GN=Hnrnpa1 PE=1 SV=3
          Length = 320

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes
          GN=HNRNPA1 PE=2 SV=1
          Length = 320

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus
          GN=Hnrnpa1 PE=1 SV=2
          Length = 320

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta
          GN=HNRNPA1 PE=2 SV=3
          Length = 320

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens
          GN=HNRNPA1 PE=1 SV=5
          Length = 372

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


>sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus
          GN=HNRNPA1 PE=1 SV=2
          Length = 320

 Score = 36.6 bits (83), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57 TPLPPD--KKLFVGMLSKQQNEDDVRKIFAPFGTIEECTVLKGPD 99
          +P  P+  +KLF+G LS +  ++ +R  F  +GT+ +C V++ P+
Sbjct: 6  SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPN 50


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.143    0.487 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,524,657
Number of Sequences: 539616
Number of extensions: 1664010
Number of successful extensions: 3318
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2898
Number of HSP's gapped (non-prelim): 434
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)